LOCUS       DATCWM010000001         2509 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_102583, whole genome shotgun sequence.
ACCESSION   DATCWM010000001 DATCWM010000000
VERSION     DATCWM010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2509
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102583"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            23..907
                     /locus_tag="VIQ50_00005"
     CDS             23..907
                     /locus_tag="VIQ50_00005"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9358784.1"
                     /translation="MAARGPVGLIGIGLLGQAFAHRLLGAGFEVVGFDVDAGKTAKLA
                     ELGGRPAASVADLARRCDPVVLAVFNTDQVEHVIESELPPALGNGSGKIVLCASTCDP
                     DRIAALGQRVAMHGLRLLETPVSGASGQVSRGEGVGLIGGDADVMNAVAPVLRALFAS
                     YFHIGKIGDAGRAKLAINLILGLNRLALAEGLIFAERLGLDPELFLKVARSSAAHSQV
                     MDVKGSKMIRGEFTAEGRIAQHLKDVHLMLEQAQRLRQPLALLEIHADILEACVRHGE
                     GELDNSAVIKELRRRGQA"
     gene            922..1755
                     /locus_tag="VIQ50_00010"
     CDS             922..1755
                     /locus_tag="VIQ50_00010"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9358785.1"
                     /translation="MIDAHHHFWWIGRHAYTWPDQAGERLARDFTPDDLRPELTRCGI
                     KGTVLVQVLHQLGGETEECLDICKEVNFVRGVVGWLPLTDPDATSRALERLRSGGKLV
                     GVRHLISNEPDPRWLLQDRVVESLKLLAAAGLAFDAIPVNAAQFESVLDLAARLPELK
                     IVINHLGRPPLPERGWEPWATQVARAAEHRCVSIKLSIGLDIIMRWRWSTDEIRRYSD
                     HVLDLFSSNRVMAASNWPVILLGASYAQTWQGIADLVSALSVDERHAVMGGTAERVYG
                     L"
     gene            complement(1766..>2509)
                     /locus_tag="VIQ50_00015"
     CDS             complement(1766..>2509)
                     /locus_tag="VIQ50_00015"
                     /inference="COORDINATES: protein motif:HMM:NF018032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase reactivating factor
                     EutA"
                     /protein_id="HEY9358786.1"
                     /translation="RPAVGQLTFSGGVAEYIYEREARTYGDLGSLFAQEVRARAQRWG
                     SKVERASEGIRATVIGASQYTTQVSGSTIYVSPLTILPLRNVPVIAPAFALDNEDIDS
                     SAVAAEIKALLKRLDLADAGTPVAVFVPWRGSATFRRLDAFCQGLTEGLAVILADGQP
                     LVLAGDGDVGGLIGIHLREEMGVDNAIVSVDGLELKEFDYIDIGAMLPMSGAVPVVIK
                     SLIFPASAAARGERQSDVHGPIPKTISMA"
BASE COUNT          410 a          820 c          841 g          438 t
ORIGIN      
        1 catcgcgccg ctcggttgac ccgtggcggc gcgcgggccc gtcggtctca tcggcatcgg
       61 cctcttgggc caggcgttcg cgcatcgcct gttgggcgcg ggcttcgaag tcgtgggctt
      121 tgatgtcgat gccggcaaga ccgcgaagct tgcggagctc ggcggccgtc ctgctgcaag
      181 tgttgccgat ctcgcgcgac gctgcgatcc cgtcgtgctt gcggtgttca acaccgatca
      241 ggtcgagcac gtcatcgaaa gcgaattgcc tccggccttg ggcaacggct ccggcaaaat
      301 cgtcctgtgt gcaagcacct gcgaccccga ccgcatcgcc gcattggggc agcgcgtggc
      361 gatgcacgga ctgcggctgc tggaaacgcc ggtttccggc gcgagcggtc aggtcagccg
      421 cggggaaggg gtcggcttga tcggcggcga cgccgacgtc atgaatgcag tggcgccagt
      481 ccttcgcgcg ctgtttgcca gctacttcca catcggcaag atcggtgacg cggggcgcgc
      541 caagctcgcc atcaacttga tcctcgggct caaccgactg gcgctcgccg aaggcttgat
      601 cttcgccgag cggctcggcc tcgatcccga gctttttctc aaggtcgcgc gcagctcggc
      661 ggcccactcg caggtcatgg atgtgaaggg ctcgaagatg atccgcggcg agttcacggc
      721 cgagggccgc atcgcccagc atctcaagga tgtgcacctc atgctggaac aggctcaacg
      781 cctgcggcaa ccgcttgcgc tgcttgaaat ccatgccgac atcctggaag cctgcgtgcg
      841 gcacggggag ggagaattgg acaatagcgc cgtgatcaaa gaactcaggc gccgcggaca
      901 ggcttgagcg ttggagcgat catgatcgac gcgcatcatc atttctggtg gatcggccgg
      961 cacgcctata cctggccgga tcaggccggc gagcgcctcg cacgcgattt cacgccggac
     1021 gacctgcgcc cggagctcac gcgctgcggg atcaagggaa cagtgctggt ccaggtcctg
     1081 caccagctcg ggggcgagac cgaggagtgt ctcgacatct gcaaagaggt caacttcgta
     1141 cgcggcgtcg tcggctggct gccgctcacc gatcccgatg ccacctcgcg cgcgctcgag
     1201 cggctgcgct ccggcgggaa actcgtcggc gtccgccatc tcatcagcaa cgaaccggac
     1261 ccccgctggc tgctgcagga ccgcgtcgtg gagtcgctca aactcctggc cgcggcgggc
     1321 ctcgccttcg acgctattcc cgtcaacgcg gcgcaattcg aatccgtgct cgacctcgca
     1381 gctcggctgc ccgagctcaa aatcgtgatc aatcatcttg gccggccgcc gcttccggag
     1441 cggggctggg aaccgtgggc gacgcaagtt gcccgcgcgg ccgagcatcg ctgcgtatcg
     1501 ataaaactct cgatcggact cgacatcatc atgcgctggc gctggtcgac ggacgagatc
     1561 cggcgttata gcgatcacgt gctcgaccta ttcagttcca atcgcgtcat ggcggcgagc
     1621 aattggccgg tgatcttgct tggcgcaagc tacgcgcaga cgtggcaggg gatcgccgat
     1681 ctggtctcgg cgctttccgt cgacgagcgc cacgcggtca tgggcggcac ggcggagcgg
     1741 gtgtacgggc tgtgatcgtc ggccgttagg ccatggaaat cgttttcgga ataggtccgt
     1801 gaacgtccga ctgccgttct ccgcgtgctg cggcgctggc gggaaagatc aacgacttga
     1861 tcaccacggg taccgcgccg gacatcggca gcatggcgcc gatgtcgatg tagtcgaact
     1921 ctttgagctc gagaccgtcg accgagacga ttgcgttgtc gacgcccatt tcctcgcgca
     1981 ggtgaatgcc gatcaggccg ccgacgtcac cgtcgccggc cagcaccagc ggctggccat
     2041 cggcgaggat caccgcgagc ccctcggtca ggccttggca gaacgcgtcg agccgccgga
     2101 aggtcgccga gccgcgccac gggacgaaca ctgcaaccgg cgtgccggcg tcggcgaggt
     2161 cgaggcgctt gagcagcgcc ttgatctccg ccgccaccgc ggagctgtcg atgtcctcgt
     2221 tgtcgagcgc gaaggcgggc gcgatcaccg gcacgttgcg cagcggcaag atcgtgagcg
     2281 gggagacgta gatggtgctg ccgctcacct gcgtggtgta ttgcgaggcg ccgatcacgg
     2341 tggcacggat accttcgctc gcgcgctcga cctttgatcc ccagcgttgc gcgcgggcgc
     2401 gaacctcctg cgcgaacagg ctgccgagat cgccgtaggt ccgcgcctcc cgctcataga
     2461 tgtattcggc gacgccgccg gaaaacgtca gttgccccac ggccgggcg
//
LOCUS       DATCWM010000002         2264 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_172781, whole genome shotgun sequence.
ACCESSION   DATCWM010000002 DATCWM010000000
VERSION     DATCWM010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2264
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_172781"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..436
                     /locus_tag="VIQ50_00020"
     CDS             <1..436
                     /locus_tag="VIQ50_00020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012556065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY9358787.1"
                     /translation="AVDMKLEVAVIPVSDVDRAKRFYENLGWRLDADFVRPDGSLAVQ
                     FTPPGSPTSIHLGTGPALPHYLVVNDLKAARAELISSGVDVSEVFHRGPKGRIPENWR
                     SCGRHSEQDHALSDARGKAESCRPSHGRRRDERTAGGGQAAF"
     gene            500..1075
                     /locus_tag="VIQ50_00025"
     CDS             500..1075
                     /locus_tag="VIQ50_00025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEY9358788.1"
                     /translation="MARPRNFDPDEVLGLAREVFWQKGFQGTSLDDITEATGLNKPSL
                     YAAFGDKNALFLKVLDRYHAYIVENAERIINEGPSARDAIERWLTGFVPRCSGVKGSR
                     GCLSVNASVDGAGENKEVRKRVAAFNRKLELLLRDRLRADRTQFSDQFDPDAVAHTII
                     AIYQGLMVLAKDAPEAARVRAALDQTMKLLV"
     gene            1124..2098
                     /locus_tag="VIQ50_00030"
     CDS             1124..2098
                     /locus_tag="VIQ50_00030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HEY9358789.1"
                     /translation="MKAIQIEAFGNPAEVLKLVDIPDVGPPGAGEVVIALEASPINMS
                     DLLMISGRYGYRPKLPSIVGTEGVGRVVAVGSGVKHLKEGDRTLVPYPAPAWAERIKT
                     DATRLRPLAGDNVQQLAMLGINPPTAYLMLTDYVKLKPGAWVIQNAGNSGVGRALIGI
                     AKSQGLKTVNVVRREDVVAELKAAGGDVVLVDGPDLAKRVATETGGAQISLAIDGVAD
                     TATANLIGCLAPKGSLVFYSAISGKPFTAPAQPFIFRDIAIRGFWLANWFNSASADQI
                     TAMYDQLAPLVASGVISAPVAGTFSFAQIPEAVAVAAKNRGKALFTPG"
BASE COUNT          417 a          735 c          698 g          414 t
ORIGIN      
        1 tgcagtcgat atgaagctgg aggttgccgt cattcccgtt tccgacgtcg accgcgccaa
       61 acgcttctat gaaaacctgg gctggaggct cgacgccgat ttcgtcagac ccgacgggtc
      121 cctcgctgtg caattcacgc ctcccggctc accaacctcg atccaccttg gcaccgggcc
      181 ggcattgccg cactacctcg tcgtgaacga cctcaaggcg gcccgcgccg aactcatctc
      241 cagcggtgtc gatgtcagcg aggtttttca ccgcggcccg aaaggtcgca tccccgaaaa
      301 ctggaggtcg tgtggccggc actccgagca agatcacgcg cttagtgacg cccgcgggaa
      361 agcggaaagc tgtcgcccat ctcatggacg ccgacgggat gagcgaacgg cgggcggtgg
      421 ccaggcggcg ttctgattct ccatcaggac cgaagttcca ggtgttggcg atttcgcatc
      481 gaccgcgtag ataggtcaaa tggcacgccc ccgcaatttt gaccccgatg aagttctcgg
      541 cctcgcgcgc gaggtcttct ggcaaaaggg tttccagggc acctcgctcg acgacatcac
      601 cgaagcgacc gggctcaata agccgagcct ctatgccgcc ttcggcgaca agaacgcgct
      661 gttcctgaag gtgctcgacc gctaccacgc ctacatcgtc gagaatgccg agcgcatcat
      721 caatgagggc ccgtcggcgc gcgatgcgat cgagcgctgg ctgaccggct tcgtcccgcg
      781 ctgctccggc gtcaagggca gccggggctg cctctcggtc aacgcctcgg tcgacggcgc
      841 cggcgagaac aaggaggtca gaaagcgggt cgcggccttc aaccgcaaac tcgaactgtt
      901 gcttcgcgac cgcctgcgcg ccgaccgcac acaattttct gatcagttcg atcccgacgc
      961 cgtcgcgcac acgattatcg cgatctatca gggacttatg gtgctggcca aggacgcacc
     1021 cgaggccgcg cgggtgcgcg ccgcgctcga tcagacgatg aagctgcttg tttgacggca
     1081 tttttccatt atgtactgtg aagtatacaa tcggagagac gccatgaagg ccattcagat
     1141 cgaagcgttc ggtaatcctg ccgaggtgtt gaagctcgtc gacattcctg atgtcgggcc
     1201 acccggcgcg ggcgaagtgg tgatcgcact cgaagcgtcg ccgatcaaca tgagcgacct
     1261 gttgatgatc tctggccgct acggctaccg accgaagctg ccgagcatcg tcggcaccga
     1321 gggcgtcggc cgcgtggtcg cggtcggcag cggcgtcaag catctgaagg aaggcgaccg
     1381 cacgctggtg ccctatcccg cgccagcctg ggcggagcgg atcaagaccg acgcgacgcg
     1441 gctcaggcca cttgccggcg acaacgtgca gcagcttgcg atgctcggca tcaatccgcc
     1501 gactgcatat ctgatgctga ccgactacgt gaagctgaag ccgggcgcgt gggtgatcca
     1561 gaatgcgggc aattccggcg tcgggcgtgc gctgatcggg atcgcgaaat cgcagggact
     1621 gaagaccgtc aacgtcgtgc ggcgtgagga cgtcgtcgcc gagttgaaag cggccggcgg
     1681 cgatgtcgtg ctggtcgacg gccccgatct tgccaagcgc gtggcgactg aaaccggcgg
     1741 cgcacagatc tcgctcgcca ttgacggtgt cgccgatacc gcaacggcaa acctgatcgg
     1801 atgcctggcg ccgaagggtt cgctggtgtt ctacagcgcg atcagcggca agccgttcac
     1861 cgcaccggcg cagcccttca tcttccgcga catcgcaatc cgcggcttct ggctcgccaa
     1921 ctggttcaac agcgcaagtg cggaccagat cactgcaatg tatgatcaac tcgccccgct
     1981 ggtcgcctcc ggtgtcatca gcgccccggt cgccggcacc ttcagctttg cgcaaatccc
     2041 ggaagcggtt gcggtcgccg cgaagaaccg cggcaaggcg ctgttcacgc cgggatgatc
     2101 aaaccgcggc aattttctca gatatcgctg gcccggcgcc acctgtgccg ggcttttgcg
     2161 tcctcacggc ctctcacgcg aaactttgtc catgacgaat ggtcgcccgc acctttttgc
     2221 tggcggccca cgcctatcca cgggccttta tgcgtctcgt tccg
//
LOCUS       DATCWM010000003         5316 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_518284, whole genome shotgun sequence.
ACCESSION   DATCWM010000003 DATCWM010000000
VERSION     DATCWM010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5316
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_518284"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..778)
                     /locus_tag="VIQ50_00035"
     CDS             complement(<1..778)
                     /locus_tag="VIQ50_00035"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9358790.1"
                     /translation="MRRREFITLLGGAAAWPLAARAQQKGKLPTIGFFGNTSASGGGP
                     WTAAFVQRLGELGWIDGRTATIVYRWAEGRSETSAEAAAEFVRLKVDVIVSSGVATPA
                     MKQATSVIPIVFTLDADPVGRGLVAALARPGDNVTGLSSQSTELVGKRLELLRDIIPD
                     FRRLAVLTNVNFFGSAQEVAEIRTAARALGVDIVDMLEVRKPEDITPAFATLTGKAQA
                     LYVCADNLINVFQNRINILALGARLPTMLNNQTFLPTGGFI"
     gene            complement(829..1089)
                     /locus_tag="VIQ50_00040"
     CDS             complement(829..1089)
                     /locus_tag="VIQ50_00040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004676991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HEY9358791.1"
                     /translation="MDGGVGWIAAIIIGGIAGWLAEQFMKSDMGLLMNIVLGIVGAAI
                     ASAVLSVFGIVLGGWLGYLIAGFIGACLLIWIVRLVRGTRPA"
     gene            1507..2442
                     /locus_tag="VIQ50_00045"
     CDS             1507..2442
                     /locus_tag="VIQ50_00045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018042396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HEY9358792.1"
                     /translation="MNHSIVFLDRGTLGAELRAPGFPHSYQEYAATPAQLVAERLRDA
                     TIAIINKVPMPAETLAQLPKLRLIAVAATGTDIVDKDYCRVKGITVVNIRDYAFNTVP
                     EHVFALIFALRRNLIAYREDVRNGAWQRAEQFCFFTHPIRDVAGSTLGIVGFGALGKA
                     VARRAEALGMRVLATDFVLAPGLVDLPTVLRSSDVVTLHAPLTDDTRNLIGAEQLAMM
                     RRNAILINTARGGLVDEGALAQALQDGIIGGAGFDVLTNEPPMTGNVLLDLDLPNFIV
                     TPHIAWASQEAMQILADQLIDNVEAFVAGEPRNVV"
     gene            2805..3731
                     /locus_tag="VIQ50_00050"
     CDS             2805..3731
                     /locus_tag="VIQ50_00050"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside phosphotransferase family
                     protein"
                     /protein_id="HEY9358793.1"
                     /translation="MPLDGGVSSDIWRIEIGAQKYCLKRALAQLKVSQIWEAPIERND
                     AEWKWLAEAEAIWPGSAPRLVAQDRNAGLFVMEYLDPDRYPNWKSQLRDGILREETAI
                     AVAERLVAIHAATAGRPGVAAAFDTGVCFYAIRLEPYLVATGRVHTDLAPRLEALASA
                     TLATKRALVHGDVSPKNILVGPDGPVFIDSECAWYGEPAFDLAFCLNHLLLKCLWRPE
                     SARGFLRLFDRLTETYLAGVTWQPRAEMEALAAALLPALLLGRIDGKSPIEYVTEERE
                     KNQVRDFARRYIATRVDRLDVIRDAWAQQVHA"
     gene            3728..5020
                     /gene="eno"
                     /locus_tag="VIQ50_00055"
     CDS             3728..5020
                     /gene="eno"
                     /locus_tag="VIQ50_00055"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004634 - phosphopyruvate hydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEY9358794.1"
                     /translation="MSTTEIISVRGRRVWDSRGRPTVEAEVTLAGGALGRAIAPAGAS
                     TGSGEAVDLRDGGSRFGGADVMMAVGNVNGEIARTLRGCDARDQKIIDDVLIALDGTP
                     NKARLGANALVGTSMAVLHAAAAAAGVPLYAYLLGDRPAIIPIPEVQIFGGGAHAGRR
                     VDIQDFMVVAPKARSFAEALEWTAEIYRAAGAMMSETGRLQGVADEGGFWPAFDSNEA
                     ALDALVGAIERAGFTPGDEVSISLDIASSEFYRDGAYRLALKGLVLDSDAMSAMLIDW
                     LDRYPIVSIEDPLAEHDAAGFTRFTKAVGHRVQIVGDDFLVTDAARLRRAAAMPACNA
                     ILVKPNQVGTVSEAMAAVEAARAAHWGAIVSARSGETEDVTIVHLAVGWGVLQLKVGS
                     FSRSERMAKWNEALRIEEALDGRARFAGAAPWRGSVAV"
BASE COUNT         1000 a         1631 c         1654 g         1031 t
ORIGIN      
        1 agatgaaccc gccggtcggg agaaaggttt ggttgttaag catcgtcggc agccgcgcgc
       61 ccagcgccaa gatattgatg cggttttgga acacgttgat caaattgtcg gcgcacacgt
      121 atagggcctg ggctttgccc gtaagcgtgg cgaaggctgg cgtgatgtcc tcgggcttgc
      181 ggacctccaa catgtcgacg atgtcgacgc cgagtgcgcg ggcggccgtc cgaatctcgg
      241 ccacctcctg tgcggagccg aaaaaattga cgttggtcaa gaccgccaag cggcggaagt
      301 ccgggataat gtcgcgcagg agttcgagcc gcttgcctac aagctcggtc gactgggacg
      361 acaggccggt gacgttatct cccggccgcg ccagggcagc caccagaccc cggccaaccg
      421 gatcggcgtc gagcgtaaag acaatcggga tgaccgacgt tgcctgcttc atcgcaggcg
      481 tcgcgacccc ggacgacacg atgacgtcaa ccttgagccg gacaaactcg gcagcggctt
      541 cggcggaggt ttcgctccgc ccctccgccc agcgatacac gatcgtcgcg gtgcggccat
      601 cgatccagcc gagctcgccg agacgctgga cgaaggcggc ggtccatggg cctccgccgg
      661 atgccgaggt atttccgaag aacccgatgg tcggcagttt gcccttctgc tgcgcgcgcg
      721 cagcgagcgg ccacgccgcc gcgccgccga gcagcgtgat gaactcgcgc cgcctcatgg
      781 atcattgcct ccgccagccg gacccccaca gggccaggag gtccgtcctc aagctggccg
      841 tgtccccctt accagccgga cgatccagat cagcaagcac gcgccgatga agccggcaat
      901 taggtagcct aaccatcctc caagaacgat cccaaatacg ctcaaaacag cgctggcaat
      961 cgccgccccg acgatgccaa gcacaatatt catcagcagc cccatgtcac tcttcatgaa
     1021 ctgctctgct aaccatcctg cgatcccgcc gatgatgata gcagcgatcc agcccactcc
     1081 gccgtccatg gctcgtctcc cgaaaacgat gcaccttgca ccggcatttt ctaacgggcg
     1141 aggggcgaga acaagcatct gcacagcatg tttcttgcca tttttcgtga tagtgcggcg
     1201 ttgtgcatca cggcaaattt ggcggccaat gtctctggtg ggtcaacaac ggcggttatc
     1261 cgtgtgcttg cataaggtcc gcttcacctc agtaacccga cattgatggt gagtgtcggg
     1321 acttcgcgtt cgtgccataa gcggtgtgga ggaggctttc ctgccgagca ctctaagtcc
     1381 ggaggcctct ccatgccgat gctcgattca tattgagctc atcgcctcgc agagctatgc
     1441 cagtcccgcg gtgatggaag cgcagggcag cgcctgagtt ttctatggat ggcgttcgga
     1501 atgtcgatga atcattcaat cgtgttcctc gaccgtggca cgcttggcgc tgaattacga
     1561 gcgccgggat ttccgcattc ctaccaagaa tacgccgcca cgccggccca gttggttgcc
     1621 gaacggctca gagacgcgac gatcgctatc atcaataaag tgcccatgcc ggccgagacg
     1681 ctcgcgcagc tgccgaagct aagactgatc gctgtcgccg cgactggaac tgatatcgtc
     1741 gacaaggact attgccgagt taaaggcatc accgtcgtca acattcgcga ctacgccttc
     1801 aacacggtgc ctgaacatgt gttcgcattg attttcgcgt tgcgccgcaa cctgattgcc
     1861 tatcgagagg atgtgcggaa cggagcgtgg caacgtgctg aacagttctg tttcttcacc
     1921 catcccattc gcgacgtcgc gggttcgact ctcggcattg tcggatttgg tgctctcggc
     1981 aaggcagtgg cgcgccgcgc agaggccttg ggaatgcgag tgcttgcgac cgacttcgtg
     2041 ctcgcgccgg gcctcgtcga cctcccgaca gttctcagga gcagtgacgt tgtcacactg
     2101 catgcaccgc tgacggacga tacgcgaaat ctaattggcg ccgagcagct ggcgatgatg
     2161 cggcgcaacg caattctcat caatacggcg cggggcggtc tcgtcgatga aggtgcgctg
     2221 gcgcaggcgc ttcaagacgg catcatcggc ggagccggat tcgacgttct caccaatgag
     2281 ccgcccatga ctggcaacgt gctcttggat ctggatctgc cgaacttcat tgtaactccg
     2341 cacatcgctt gggccagcca ggaagctatg cagattctgg cggatcagct gatcgacaat
     2401 gtcgaagctt tcgtggccgg cgagccgcgc aacgttgtgt aagctcgagc gtagtagtaa
     2461 tcgactgacg gaatctatgg atttgtggcg ggacaacgag agttctcctc gcagcatcga
     2521 tcttttatgg aaagactatg ttccgctgct ttggatggcg attagtactt accttggtgg
     2581 caaatcggaa aggctttcct ccgccagcgc cacgcacaat agcgcttgtg acggcggccc
     2641 aaatgcagcc ggttgagtta taatgacatg ccaccatttt ccatgaaggc tgattgttag
     2701 ctatgcgtgg gtcgacgccg cgtgccaatc cgctgactaa aggggaaatc ggtgccgtgc
     2761 tcgggcgcct aggcctgctc gcgtctggcg acaggcttag atgtgtgccg ctcgatggcg
     2821 gggtttcttc cgacatctgg cgaatcgaga tcggcgcgca aaaatattgc ctgaagcgcg
     2881 ccctggcgca gctcaaggtg tcgcagattt gggaagcgcc gatagagcgc aacgacgccg
     2941 aatggaagtg gctcgccgag gcggaggcga tctggccggg ctcggctccg cgcctcgtgg
     3001 cccaggatcg aaacgccggc ctcttcgtca tggaatacct cgatcccgat cgctatccga
     3061 actggaagag ccaactgcgc gacggtatcc tgcgggagga aacggcaatc gcggtcgccg
     3121 agcgcctggt cgcgatccac gccgcgacgg ccggccggcc cggggtcgct gccgcgttcg
     3181 ataccggcgt ctgtttctac gctatccggc tcgagcccta tttggtcgcc accgggcgcg
     3241 tccatactga tctagcgccg cggctcgagg cgcttgcgag cgccacgctc gcgactaaac
     3301 gcgcgttggt gcatggcgat gtcagcccga aaaacatcct agttgggccg gatggcccgg
     3361 tgttcatcga ttcggaatgc gcctggtacg gcgaaccggc cttcgaccta gctttctgcc
     3421 tcaatcacct actgctgaaa tgcttatggc ggccagagag cgcgcgcggc tttctccggc
     3481 tgttcgatcg cttgaccgag acatatctcg cgggcgtgac ctggcagccg cgcgcggaga
     3541 tggaggccct ggccgcggct cttctgccgg cgctgctgct gggccggatc gacggcaagt
     3601 cgccgatcga atatgtcacg gaagagcgcg agaagaacca ggtccgggat tttgcgcgcc
     3661 gatatattgc aacccgagtg gatcgcctcg acgtcattcg cgatgcatgg gcccaacagg
     3721 ttcatgcatg agcacgaccg aaatcatctc cgttcgcggc cgccgtgtct gggattcacg
     3781 cggccgaccc accgtcgagg ccgaggtgac actcgccggc ggcgccctcg ggcgggcgat
     3841 tgcgccggcc ggcgcctcga ccggcagcgg cgaggcagtc gatctgcgcg acggcggcag
     3901 ccggttcggt ggcgccgacg tgatgatggc ggtcggtaat gtcaacggcg agatcgcgcg
     3961 gacccttcgc ggatgcgacg cgcgcgacca aaagatcatc gacgacgtgc tgattgcgct
     4021 cgacggtacg cccaacaagg cccgtctcgg cgccaacgcc ctggtcggga catccatggc
     4081 agtgctccat gccgcggccg cggccgccgg cgtgccactc tatgcctatc tcctcggcga
     4141 ccggcccgcc atcataccga tcccggaggt tcaaatcttc ggcggcggcg cccatgcggg
     4201 gcgacgcgtc gacatccagg atttcatggt cgtggcgccg aaggcgcgtt ccttcgccga
     4261 ggcgctcgaa tggaccgccg agatctaccg cgcggccggc gcgatgatga gtgagaccgg
     4321 ccgccttcaa ggcgtcgccg acgaaggcgg cttctggccc gccttcgatt cgaacgaagc
     4381 agcgcttgac gccctggtgg gcgcgataga gcgcgcgggc tttacgcctg gcgatgaggt
     4441 gtcgatctcg ctcgatatcg cgtcctccga attctatcgt gacggcgcct accgcctcgc
     4501 actcaaggga ctcgtgctcg attccgacgc tatgtcagct atgctgattg attggctcga
     4561 ccgttatccg atcgtctcga tcgaggatcc tctggccgag cacgacgcgg cgggcttcac
     4621 acgtttcacg aaggcggtcg gtcaccgggt tcaaatcgtg ggcgacgatt tcctagtgac
     4681 cgatgcggct cgtctgcgcc gcgcggcagc gatgccggcg tgcaacgcga ttctcgtgaa
     4741 gccgaaccaa gtcgggaccg tgagcgaggc catggctgcg gtagaagccg cgcgcgctgc
     4801 ccattggggc gcgatcgtct ccgcgcgctc gggcgagacc gaggacgtta cgatcgtcca
     4861 ccttgctgtc ggctggggcg tgcttcagct caaggttggc tcgttttcgc gctccgagcg
     4921 catggcgaag tggaatgagg cgctgcggat cgaagaggca ttggatggcc gggcacgctt
     4981 cgccggtgcc gccccgtggc gcggctcagt ggccgtgtga gcatgcgcgt atgaaaaagc
     5041 cgtatcctca gtgtcccaaa tacctaaaaa cgacgtcata gtgaactcat ggccaataga
     5101 gcagctgacc gcacgcttgg cactcgaaaa gctgcatagc gttatcatgt gacgcgacgg
     5161 ctagaacagc caacgcccaa ggcactgtcg aaattatttc ttgaaccgca ttatctcagg
     5221 ttcttctttg gcggttgcag gagcgatcga agtgatctcc tcggtgatca ctttaaagct
     5281 gtggagggcg cactgaccga aagaagtcac aatcgc
//
LOCUS       DATCWM010000004         2519 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_54024, whole genome shotgun sequence.
ACCESSION   DATCWM010000004 DATCWM010000000
VERSION     DATCWM010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2519
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54024"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..719)
                     /locus_tag="VIQ50_00060"
     CDS             complement(<1..719)
                     /locus_tag="VIQ50_00060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017486976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HEY9358795.1"
                     /translation="MVSPSTLAPYAHHTLSDAVIPELPGYYRGKVRENYDLRNGSRIL
                     IATDRVSAFDRNIAVIPLKGQVLTQTARFWFEATQSICPNHVIEYPDPNVLVSKRLTM
                     MPVEIVVRDYLAGSTSTSILQMYKKGAREMYGHRFEDGLRDNQKLPHTIITPTTKAEQ
                     GAHDAPLSAEEIIARKLLTEKQWGEVSDKALALFACGRETAARQGLILVDTKYEFGFD
                     PKGAIVLADEVHTPDSSRYWLA"
     gene            899..1312
                     /locus_tag="VIQ50_00065"
     CDS             899..1312
                     /locus_tag="VIQ50_00065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEY9358796.1"
                     /translation="MKPSLRPGVSRVNRITIGAERTIGFMGEEARTYATPAMIRDIEY
                     TCRDLIIEHADPGEDSVGMEVAVKHLAPTLMGMTVEITVRVATVEGRKVSFDVAVKDE
                     LDEVGAGSHTRFVVDKAKTFERLKVKAARLAARSG"
     gene            1316..>2519
                     /locus_tag="VIQ50_00070"
     CDS             1316..>2519
                     /locus_tag="VIQ50_00070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetate--CoA ligase"
                     /protein_id="HEY9358797.1"
                     /translation="MAGIMRSEETFIFDRPAETMARDELEALQLARLKQTIARAYAKV
                     PPFRRKLDSAGVKPEDLRTLADIARFPFTIKTELRDNFPFGLFAVPRESVLRLHASSG
                     TTGRPTVVGYTRADLDLWSALMARSIACMGGKPGDIFHNAYGYGLFTGGLGFHYGAER
                     LGLTTVPVSGGGTERQVMLIKDFGAHLLGATPSYALNIAEVATAMGVDLRQLPLRYGC
                     FGAEPWSEAMRRQLEEKFSIKAMDIYGLSEIIGPGVASECHQAQNGLHLWEDHFLCEV
                     IDPDTAEPLPPGEAGELVLTTLTKEALPMLRYRTRDITRLMEEPCACGRTHRRMLRIT
                     GRSDDMLIVRGVNVYPSQIEAVLIGFPGLAPHYQLLLTREGPMDAVTIEVELAPPAPR
                     DEPFAGKMA"
BASE COUNT          436 a          798 c          829 g          456 t
ORIGIN      
        1 gcgagccagt agcggctgct gtcgggcgtg tgcacctcgt cggcgagaac gatcgccccc
       61 ttggggtcga aaccaaactc gtatttggtg tcgaccagaa tgagcccctg ccgcgcagcc
      121 gtctcgcggc cgcaggcgaa cagcgcgagc gccttatccg aaacctcacc ccactgcttc
      181 tcggtcagga gcttgcgcgc gatgatctcc tcggcgctca gcggcgcatc gtgcgcgccc
      241 tgttccgcct tggtggtcgg ggtaataatc gtgtgcggca gcttttgatt gtcgcgcagg
      301 ccgtcctcga aacggtggcc gtacatctcg cgcgcgccct tcttgtacat ctgcagaatc
      361 gacgtggacg tactgcccgc gagatagtca cgcaccacga tctcgaccgg catcatcgtg
      421 aggcgcttgc tcaccagcac gttgggatcg ggatattcga tgacgtggtt gggacagatg
      481 ctttgcgtgg cttcgaacca gaagcgcgcg gtttgcgtca gcacctgccc tttcagcgga
      541 atcacggcga tgttgcggtc aaacgcactc acccggtcgg tggcgatgag gatgcgcgac
      601 ccgtttcgaa gatcgtagtt ctcccgcacc ttgccgcggt aatagccggg aagctcggga
      661 atgacggcgt cggacagtgt gtggtgcgcg tagggagcga gggtggacgg gctgaccatg
      721 agaggcttga gcggctggat gcgatgactg ttgttgggag tctactgtcc ggcgctgcgc
      781 ggctcaatgc tcctatcccg attatcctca gaagtcgcag ctaaggagcc ctttgccgcg
      841 gcttgcgcaa ccgcccacaa ccgatttcaa tccgcagagc ccttgaggga gcagagcaat
      901 gaagcccagc cttcgtccgg gcgtgtcccg cgtcaaccgc atcacgattg gcgccgagcg
      961 cacgatcggc ttcatgggcg aggaggcgcg cacctatgcc acgcccgcga tgatccgcga
     1021 tatcgagtat acctgccgcg atctcatcat cgagcacgcc gatccgggcg aggattcggt
     1081 cggcatggag gttgccgtca agcatctcgc gccgacgctc atggggatga ccgtcgagat
     1141 caccgtgcgg gtcgccacgg tggagggacg caaggtgtca ttcgacgtgg cggtcaagga
     1201 cgagctcgac gaggtcggcg cgggcagcca tacccgtttc gtcgtcgaca aggccaagac
     1261 cttcgagcgg ctcaaagtca aggccgcgcg gctcgccgcg cgatcgggct agggcatggc
     1321 ggggatcatg cgcagcgagg agacgttcat cttcgatcgc ccggccgaga ccatggcacg
     1381 cgacgagctc gaggcgctac agctcgcccg cctcaagcaa acaattgcgc gcgcctacgc
     1441 caaggtgccg ccgtttcgcc gcaagctcga ttccgccggc gtcaaaccgg aggatctcag
     1501 gacgctcgcc gatattgcgc ggtttccatt caccataaag accgagctgc gcgacaattt
     1561 ccccttcggc ttgttcgcgg tgccgcgcga aagcgtgctg cggctgcacg cctcctcggg
     1621 aaccaccggc aggccgacgg tcgtgggcta tacgcgggcc gacctcgatc tctggtcggc
     1681 tctgatggcc cgctcgattg catgcatggg cggtaagccc ggcgacatct tccacaacgc
     1741 ctatggctac gggctgttca ccggtgggct cggattccac tacggcgccg agcggctcgg
     1801 gctgaccacc gtgccggtgt cgggcggcgg cacggagcgg caggtaatgc tgatcaagga
     1861 tttcggcgcg catcttctgg gcgcgacgcc atcctatgcg ctcaacatcg cggaagtcgc
     1921 cacggccatg ggggttgacc tgcgccagct tccgctgcgc tatggctgct tcggcgccga
     1981 gccttggagc gaggcgatgc gccggcagct cgaggaaaag ttctccatca aggccatgga
     2041 catctacggc ctctcggaaa ttatcggccc gggcgtcgcc agcgagtgcc atcaagcgca
     2101 gaacgggttg cacctctggg aggatcattt cttgtgcgag gtgatcgacc cggatacggc
     2161 tgagccgctg ccgccggggg aagcggggga gctggtgctc accacgctga ccaaggaagc
     2221 gctgccgatg ctgcgctatc gcacgcgcga catcacgcgg ctgatggagg agccctgcgc
     2281 ctgtgggcgc acccatcgcc gcatgctgcg catcaccgga cgcagcgacg acatgctgat
     2341 cgtccgcgga gtgaacgtct atccgtccca aatcgaggcg gtgttgatcg gttttcccgg
     2401 cctggcaccg cattatcagc tcctgctgac tcgcgagggg ccgatggacg ccgtcaccat
     2461 cgaggtcgag ctcgcgcccc cggcgccgcg cgacgagccg tttgccggaa aaatggcgg
//
LOCUS       DATCWM010000005         2823 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_464319, whole genome shotgun sequence.
ACCESSION   DATCWM010000005 DATCWM010000000
VERSION     DATCWM010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2823
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_464319"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1148
                     /locus_tag="VIQ50_00075"
     CDS             <1..1148
                     /locus_tag="VIQ50_00075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016793 - triphosphoric monoester
                     hydrolase activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="deoxyguanosinetriphosphate triphosphohydrolase"
                     /protein_id="HEY9358798.1"
                     /translation="RLHPEPVSTTRNAFRRDCDRIIHATAFRRLAHKTQVFVFHEGDH
                     FRTRLTHTLEVTQIARSLARALGLDEDLAEALALAHDLGHPPFGHAGERALDRCLATC
                     GGFDHNAQTLRVVTALERRYPDFDGLNLSWETLEGIVKHNGPLTVRDGRPVEAYRERG
                     LPHTIAIHNRMQDLELWSFASAEAQLAAIADDIAYDAHDIDDGLRAGLFVLEDLAGVP
                     LIHDILRAIRDQHPALDTPRLVHELVRRLITAMIEDVIAETASRLRSLAPRSADDVRH
                     AGQAVAGFSPAMAEADRAIKGFLYPRMYRHQRIMRIMGDAERLVCGLFAHYLERRGDM
                     PAEWAQTADEADEAARLRHIADFIAGMTDRYALTEHARLFDSTPELR"
     gene            1179..>2823
                     /gene="argS"
                     /locus_tag="VIQ50_00080"
     CDS             1179..>2823
                     /gene="argS"
                     /locus_tag="VIQ50_00080"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HEY9358799.1"
                     /translation="MGDQNIFAAVLDKVRAANDALIADGVLPAGIDQSRIVVEPPRES
                     AHGDMATNAAMVLAKGAASNPRVLAEAIAAKLRADDIVAKAEVAGPGFINLTLRPAAW
                     IAALRAILAAGKNYGRGDVGESTAVNVEYVSANPTGPMHVGHCRGAVFGDALANLLAF
                     TGFNVTREYYINDAGAQVDALARSAFLRYREALGEDIGAIPEGLYPGDYLKPVGAELA
                     AEYGAELQSKPETEWLPVVRNRAVDMMMAQIRNDLQALNVVHDVFFSERSLIAGARDQ
                     VGETIAALRRAGYVYEGRLPPPKGAPVEDWEDREQTLFRATDFGDDVDRPLMKSDGSY
                     TYFASDIAYHKSKVDRGFRSMIDVWGADHGGYVKRVQAAVKAVRAVTQAPSAELDIKI
                     VQLVKLLRGGEPVKMSKRAGEFVTLRDVVDEVGKDPVRFMMLYRKNDAALDFDLARVI
                     EQSRDNPVFYVQYGHARGQSILRNAREVVADLPSEPAAARAFLLAGAPLERLEDSGEL
                     ALMRRLALYPRLIEAAANAHEPHRIAFYLYDLASDFHAQW"
BASE COUNT          485 a          962 c          913 g          463 t
ORIGIN      
        1 gccggctcca tccggaaccg gtgagcacaa cccgcaacgc cttccggcgc gactgcgacc
       61 gcatcattca cgccaccgcc ttccgccgac tcgcgcacaa gacccaggtc ttcgtcttcc
      121 acgaaggcga tcattttcgc acccggctga cccataccct cgaggtcacc cagatcgcgc
      181 gctcgctcgc ccgcgcgctc ggcctcgacg aggacttggc cgaggcactg gcgctcgcgc
      241 acgatctcgg ccatccccct ttcgggcatg ccggcgagcg cgcgctcgat cgctgcctcg
      301 cgacctgcgg cgggttcgat cacaacgcgc agaccctgcg agtggtgacc gcgctcgagc
      361 ggcgctatcc ggacttcgac ggactgaacc tatcctggga aacgctcgag ggcatcgtca
      421 agcacaacgg gccgctcacg gtgcgcgacg gccgccccgt cgaggcttat cgcgagcgcg
      481 gactgccgca cacgatcgcc atacataacc ggatgcagga tctcgagctg tggagcttcg
      541 ccagcgccga ggcgcaactc gccgccattg ccgacgacat cgcctacgac gcccacgaca
      601 tcgacgatgg attgcgcgcc ggactatttg tcctcgagga tctcgcgggc gtgcccttga
      661 tccacgacat tctgcgagcg atccgcgatc aacatcccgc tctcgacacc ccgcggctgg
      721 tgcatgaact ggtgcgtcgc ctcatcaccg cgatgatcga ggacgtcatc gcggaaacgg
      781 cgagccggct gcggagcttg gcgccgcgct cggccgatga cgtgcgtcat gccgggcagg
      841 cggtcgccgg cttctcgcct gcgatggcgg aggcggatcg cgccatcaag ggctttcttt
      901 atccgcgcat gtatcggcat cagcgtatca tgcgcatcat gggcgacgcg gagcgcctag
      961 tttgcggtct gttcgcccac tacctggaac ggcgcggcga catgccggcg gaatgggcgc
     1021 agaccgccga cgaggccgat gaagccgcgc ggctgcgcca catcgccgat ttcattgccg
     1081 gcatgaccga ccgctacgcg ctcacggagc acgcgcggct ttttgactcg actccggaat
     1141 tgcgttaggc ggcgcgaccc gacgccgatc tgccgaccat gggcgaccag aacatctttg
     1201 ccgcagtcct cgacaaagtg cgtgccgcta atgacgcgct gattgccgac ggcgtgctcc
     1261 ctgccgggat cgaccaatcc cgcatcgtgg tcgagccgcc gcgcgagagc gcgcacggcg
     1321 acatggcgac caatgcggcc atggtgctgg ccaaaggcgc cgccagcaat ccgcgcgtac
     1381 tcgcggaagc gatcgcggca aagctgcgcg ccgacgatat cgtggcgaag gcggaggtcg
     1441 ccgggccggg tttcatcaat ctgacgcttc ggccggcggc atggatcgcc gccttgcgcg
     1501 cgatcctcgc ggcagggaag aactacgggc gcggcgacgt cggcgagagc accgccgtca
     1561 atgtcgaata cgtctccgcc aatccgaccg gcccaatgca tgtcggtcat tgccgcggcg
     1621 cggttttcgg cgacgcgctc gccaatctct tggcgttcac cggcttcaac gtgacgcgcg
     1681 agtactacat caacgacgcg ggtgcccagg tcgatgcgct cgcacgctcc gcgttcctgc
     1741 gctaccgcga ggcgctgggc gaagacatcg gcgccattcc ggaagggctt tatcccggcg
     1801 attacctcaa gccggtcggg gcggagcttg ccgccgagta cggcgcagag ttgcagagca
     1861 agccggagac ggaatggctg cccgtcgtcc gcaaccgcgc cgtcgacatg atgatggcgc
     1921 agatccgcaa cgatcttcag gcgctcaacg tcgtgcacga cgtgtttttt tccgagcgct
     1981 cgctgattgc aggcgcgcgg gatcaggtcg gcgaaaccat cgccgcgctg cggcgcgcgg
     2041 ggtacgtgta cgaagggcgc ctaccgccgc ccaagggcgc gccggtggag gactgggagg
     2101 atcgcgagca gacgctgttc cgtgccaccg actttggcga cgacgtcgac cgcccgctga
     2161 tgaaatcgga cgggagctac acttacttcg cctcggacat cgcctatcac aagagcaagg
     2221 tcgaccgcgg cttccgcagc atgatcgacg tgtggggcgc cgatcacggc ggctacgtca
     2281 agcgcgtgca agcggcagtc aaagcggtgc gggcggtcac gcaagctccg agcgccgagc
     2341 tcgacatcaa gatcgtgcaa ttggtcaagc tgctgcgtgg cggggagccg gtgaaaatgt
     2401 ccaagcgcgc cggtgagttc gtgacgttac gcgacgtcgt ggatgaagtc ggcaaggacc
     2461 ccgtgcggtt catgatgctc taccgcaaga acgacgctgc gctcgatttc gacctcgcca
     2521 gggtgatcga gcagtcccgc gacaatccgg tgttctacgt ccagtacggc cacgcccgcg
     2581 gccaatcgat tttgcgcaac gcgcgcgagg tcgtcgccga tctgccgagc gaaccggcgg
     2641 cggcgcgggc cttcctgctc gcgggcgcgc cgctcgagcg cttagaagat tccggcgagc
     2701 ttgcgctgat gcggcggctc gcgctctacc cgcgcctcat cgaagcggcc gcaaatgccc
     2761 atgagccgca ccgcatcgcc ttctatctct atgatcttgc aagcgatttc cacgcgcagt
     2821 gga
//
LOCUS       DATCWM010000006         2023 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_512934, whole genome shotgun sequence.
ACCESSION   DATCWM010000006 DATCWM010000000
VERSION     DATCWM010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2023
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_512934"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..502)
                     /locus_tag="VIQ50_00085"
     CDS             complement(<1..502)
                     /locus_tag="VIQ50_00085"
                     /inference="COORDINATES: protein motif:HMM:NF024841.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase-like activity of phytase family
                     protein"
                     /protein_id="HEY9358800.1"
                     /translation="MLARGQAIASPPGLRSLPANKGIEALVFVPKGLPLAGTLIAISE
                     RGLDKAGNIGAFLIGGPTPGAFAIKRSASYDITDAALLPGGNILLLERRFGWAIGLAV
                     RLRRISLGDIKPGALADGAVLFEADLGYEIDNMEGLSVHRAAGGEIVLTLVSDDNFSP
                     LQRTLLL"
     gene            complement(514..1038)
                     /locus_tag="VIQ50_00090"
     CDS             complement(514..1038)
                     /locus_tag="VIQ50_00090"
                     /inference="COORDINATES: protein motif:HMM:NF024841.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase-like activity of phytase family
                     protein"
                     /protein_id="HEY9358801.1"
                     /translation="MNDRARRWRCGLACPSQRTITAVIAFAWLIGATPAAAQTSPSAA
                     SPLAIEIRAEPITGFDLRDPSRRQFGLLEFRGGLLLRSPNRNFGGISAIRVAADGAHF
                     IALTDKGWWFRGRLLYAGSRPSGIADAEMAPILGADGRPLAARGWYDTEAIAEDGGTL
                     YVGIERVHQIVRFN"
     gene            complement(1035..>2023)
                     /locus_tag="VIQ50_00095"
     CDS             complement(1035..>2023)
                     /locus_tag="VIQ50_00095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cobaltochelatase subunit CobT"
                     /protein_id="HEY9358802.1"
                     /translation="RRHGQNEPRGPDYRPFITKHDETVAAEDLCEPEELDRLRGYLDK
                     QLSHLQGVVARLANRLQRRLMAQQNRAWEFDLEEGLLDPARLSRVIVDPLHPLSFKHE
                     KETSFRDTVVTLLLDNSGSMRGRPITVGATCADILARTLERCGVKVEILGFTTRAWKG
                     GQSREAWLAAGKPPNPGRLNDLRHIIYKSADAPWRRARKNLGLMMREGLLKENIDGEA
                     LDWAHKRMMGRSEQRRILMMISDGAPVDDSTLSVNPGNYLERHLRWVIEDIETRSPVE
                     LIAIGIGHDVTRYYRRAVTIVDAEELGGAMTEKLAELFDEQSPGEPRRRADA"
BASE COUNT          349 a          652 c          676 g          346 t
ORIGIN      
        1 gcaacagcag cgtgcgctga agcggcgaga aattgtcatc ggagacgagc gtgaggacga
       61 tttcgccgcc ggcggcgcgg tgcacgctca agccttccat gttgtcgatc tcgtagccga
      121 ggtccgcctc gaacagaacg gcaccgtcgg ccaacgcccc tggcttaatg tcgcctagcg
      181 agatgcggcg gagtcggacg gcaaggccga tggcccagcc aaatctccgc tcaagcaaga
      241 gaatgttgcc gccgggcagg agggcagcgt cggtgatgtc gtagctcgcg ctgcgcttga
      301 tcgcgaaagc accgggcgtg ggaccgccga taaggaaagc gccgatattg cctgccttgt
      361 cgagaccgcg ctccgagatc gcgatcagcg tgccggcgag cggcaaaccc ttggggacga
      421 acaccagcgc ctcgatgccc ttgttcgccg gaagcgagcg cagtcccggc ggcgacgcga
      481 ttgcctgccc gcgggcgagc aggccctctt tgcctaattg aaccggacga tctgatgcac
      541 gcgctcgatc cctacataga gcgtgccgcc atcctccgcg atcgcttccg tgtcatacca
      601 accgcgcgcc gccagcggac ggccgtcggc gccgaggatg ggcgccatct cggcgtccgc
      661 gatcccgctc ggccgcgagc ccgcataaag cagccggccg cgaaaccacc agcccttgtc
      721 ggtcaaggcg atgaaatgcg cgccatccgc ggcgacgcga atggcggaga tgccgccgaa
      781 gtttctgttg ggcgagcgca gaaggagacc gccgcggaat tcgagcaatc cgaactgacg
      841 acgcgagggg tcgcgaaggt cgaatcccgt gattggctcg gcgcggatct cgattgcaag
      901 cggcgacgcg gcggatggcg atgtctgcgc cgccgcgggc gtggctccga tcagccaggc
      961 gaatgcgatg accgcggtga tggtccgttg gcttggacac gcgagaccgc aacgccaacg
     1021 gcgcgcgcgg tcgttcacgc gtctgctctc cgccgcggct cgccggggga ttgctcgtcg
     1081 aacagctcgg cgagcttttc agtcatggcg ccgccaagct cctcggcatc gacgatggtg
     1141 acggcgcgac ggtagtagcg cgtgacgtca tggccgatgc cgatggcgat cagttccacg
     1201 ggcgagcgcg tttcgatatc ttcgatgacc cagcgcagat gccgctcaag gtagttgccg
     1261 gggttgaccg acagcgtcga atcgtcgacc ggggcgccgt cggagatcat catcaggatc
     1321 ctgcgctgtt cgctccggcc catcatccgc ttgtgcgccc aatcgagagc ttcgccgtcg
     1381 atattttcct tcaacagccc ctcgcgcatc atgagaccga gattcttgcg tgcgcggcgc
     1441 caaggcgcgt cggccgactt gtagatgatg tggcgcagat cgttgagcct gcccggattg
     1501 ggaggcttgc cggcggcgag ccacgcctcg cgcgattgcc cgcccttcca agcgcgcgtg
     1561 gtgaagccca gaatctcgac tttgacaccg cagcgctcca gcgtgcgcgc aaggatgtcg
     1621 gcgcaggtcg cccccaccgt gatcggccgt ccgcgcatcg agcccgaatt gtccagcaag
     1681 agcgtgacga cggtatcccg gaagctggtt tctttctcgt gcttgaacga gagcggatgc
     1741 agtggatcga ctatgacgcg cgagagtcgc gcgggatcga gcaagccttc ctcgaggtcg
     1801 aactcccagg cgcggttctg ctgcgccatc aacctgcgct gcagtcggtt ggcaagccgc
     1861 gcgaccacgc cttgcaaatg cgacagctgc ttgtcgagat agccgcgtag acgatcgagc
     1921 tcctccggct cgcacagatc ctcggctgca accgtttcgt cgtgtttggt gatgaagggc
     1981 cgatagtccg gcccgcgcgg ctcgttctgg ccgtgtcggc ggg
//
LOCUS       DATCWM010000007         3571 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_491358, whole genome shotgun sequence.
ACCESSION   DATCWM010000007 DATCWM010000000
VERSION     DATCWM010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3571
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_491358"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..629
                     /locus_tag="VIQ50_00100"
     CDS             <1..629
                     /locus_tag="VIQ50_00100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HEY9358803.1"
                     /translation="ALLLSSSSARPATEQAQLMKDASRLLVGHPFNPPHLIPLVEVVP
                     GERTAPEATADAVAFYEALGKVPRVLKKEIQGFVANRLQRAIMREACYLVQEGVVTVD
                     ELDDIVTSSIGLRWAVNGPFSSFHMGGGPKGLESFFAHLGKNMAASFKVIPQVELDDT
                     LKQRIIEQAAASFGKTPIPQMERKRDDAQIALLHALATVASQPADGQS"
     gene            626..1393
                     /locus_tag="VIQ50_00105"
     CDS             626..1393
                     /locus_tag="VIQ50_00105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY9358804.1"
                     /translation="MSGSLNGRRALVTAGASGIGRVIAAQLTEAGARCMVCDVDAAAL
                     DEYASAFGAVRADVADETQVDALFAEVKRQLGGLDILVNNAGISGPTLPAEELSLDDW
                     RRTLAVNLDGHFLCARRAIPLLRAAGGGSIVNMSSIGGRLGYPKRAAYAAAKWGIVGF
                     TKTLSIELGPDGIRVNAIQPGMVEGPRVERVMREKAEALGMPYEDLHARALQRISLRR
                     GITAEDIAALVVFLVGDGGRNISGQAIPVDGDATSLG"
     gene            1484..2686
                     /locus_tag="VIQ50_00110"
     CDS             1484..2686
                     /locus_tag="VIQ50_00110"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEY9358805.1"
                     /translation="MSGILEGLKVIDCGSFIAAAIAGTVLADFGADVIKIEPPGTGDA
                     YRHVTRNPGMPKSEHNYGWLLDNRNKRGLALDLASPAGQEVLHNLVKQADVFITNQPL
                     AVRKKLGTDHERLAALNDRLIYASFTGYGETGAEAGKPGFDLTAYWARSGLMDGVVPH
                     AGATPARALSGMGDHPSGISLFSAIMLALYQRERTGRGAHVGSSLIANGVWANGVWAQ
                     AALCGATFLPRPPREQSFNALACHYRCRDGGWLLLALVNEDKHWPVLAQCLGREELPS
                     DPRFSSRSARSAHSAELIAILDQAFATRDSAEWRALFTKNGLVFEAVAQMSEIPRDPQ
                     MLETGVLRPFENDTLLTVDSPFFVTGAKKATARKPPALGEHSEQILREAGYDDAAITQ
                     LREKKAFA"
     gene            2726..>3571
                     /locus_tag="VIQ50_00115"
     CDS             2726..>3571
                     /locus_tag="VIQ50_00115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY9358806.1"
                     /translation="MTLEPLPGDFYNFQSLLTREEQDIVARVRAFFQEKVAPIANDAW
                     AAAEFPFDLIPGFAALDIVKLSHEGARSLLTGWISLEMSRVDPSHSTFFGVHSGLATG
                     TVRSFGSDEMLERLLPAMMRMQKIGAFALTEPEGGSDVSAGMRTVARREGDHWVLNGA
                     KRWIGNATFADLVIVWARDEADNKVKGFVVEKGTPGFTATKIERKMALRTVQNADIVL
                     ADCRVPEANRLQKARGFRDTAEVLRRTRAGVAWQSVGIMMGAYENALAYAKTRKQFGK
                     PIASFQ"
BASE COUNT          649 a         1175 c         1151 g          596 t
ORIGIN      
        1 acgcgctgct gctgtcgtcg agctcggccc gcccggccac cgagcaggca cagctgatga
       61 aggacgcgag ccgcctgctc gtcggtcacc ccttcaatcc gccgcatctg ataccgttgg
      121 tcgaggtcgt gccgggcgaa cgaaccgccc cggaggccac cgccgacgcg gtcgccttct
      181 acgaggcgct cggcaaggtg ccccgggtgc tcaaaaagga gatccagggc ttcgtggcca
      241 atcgtctgca gcgcgcgatc atgcgcgagg cctgttacct cgtgcaggaa ggcgtggtca
      301 ccgtcgatga actcgacgat atcgtcacca gctcgatcgg cctgcgctgg gccgtcaatg
      361 ggccgttcag ctcgttccac atgggtggcg gaccgaaggg cctggagtcg ttcttcgccc
      421 acctcggcaa gaacatggcg gcctccttca aggtgattcc acaggtcgag ctcgacgata
      481 cgctcaagca gcgcatcatc gaacaggctg ccgcctcgtt cggcaagaca ccgatcccgc
      541 agatggagcg caaacgcgac gacgcgcaga tcgcgctgct gcacgcactc gcgaccgtcg
      601 catcgcaacc cgcggacggt caatcatgag cggctcactc aatggacgcc gcgcgttggt
      661 aacggccggg gcttctggaa tcggccgcgt catcgccgcg caactgactg aggccggcgc
      721 ccgctgcatg gtctgcgacg tcgatgccgc ggcactcgac gaatacgcgt cggcatttgg
      781 cgcggttcgc gccgacgtcg cggacgaaac ccaggtcgat gcgctgttcg ccgaggtcaa
      841 gcggcaactc ggcggccttg atatcctcgt caacaacgcc ggtatttccg ggccgacctt
      901 gccggcggag gaactgtcgc tcgacgactg gcggcgtacg ctcgcggtca atcttgacgg
      961 ccacttcctc tgcgcgcggc gcgcgatccc gctgctgcgt gcagccggcg gcggcagcat
     1021 cgtcaacatg tcatcgatcg gcggccggct cggctatccc aagcgcgccg cctatgcggc
     1081 ggccaaatgg ggcatcgttg gcttcaccaa gacgctgtcg atcgagcttg ggcccgacgg
     1141 aatccgtgtc aacgccatcc agcctggaat ggtcgagggt ccgcgggtcg aacgtgtaat
     1201 gcgcgagaag gccgaagccc tcggcatgcc ttacgaggac cttcacgccc gcgcgctgca
     1261 gcgcatatcg ctgcggcgcg ggatcaccgc cgaggatatc gcggcgctcg ttgtcttcct
     1321 cgttggcgat ggcgggcgca acatttcggg acaggcgatc ccggtggatg gagacgcgac
     1381 gagcctggga tgacgtggcg gcgcgactgc ggccgagcgt ccgggaactg gcagagatac
     1441 atgactgagg tgaaccgaac accacagctc gggaggaaga tcaatgtctg gaattcttga
     1501 agggttgaaa gtcatcgact gcggcagctt catcgccgcg gcaatcgcgg gcaccgtgtt
     1561 ggccgatttc ggcgctgacg tcatcaagat cgagccgccg ggcaccggcg atgcctaccg
     1621 gcatgtgacc aggaatcccg gcatgccgaa gtcggaacac aattacggct ggctgctgga
     1681 caaccgcaac aagcgcggcc tcgcactcga cctcgcctcg ccggccggac aggaggtctt
     1741 gcacaacctc gtcaagcagg ccgatgtttt catcaccaat cagccgctgg cggtgcgcaa
     1801 gaagctcgga accgaccacg aacggcttgc cgcgctgaac gaccggctga tctacgcctc
     1861 cttcaccggc tatggcgaga ccggcgccga agcaggcaag cccggtttcg acctcaccgc
     1921 ctattgggcc cgctccggcc tgatggatgg ggtggtgccg catgccggcg cgacgccagc
     1981 gcgcgcactg agcggcatgg gcgatcatcc ttccggcatc tcgctgttct cggcaatcat
     2041 gctggcgctc taccagcggg aacgaaccgg ccgcggcgcg catgtcggct catcgctgat
     2101 cgccaacggc gtctgggcca atggcgtgtg ggcgcaggcc gcgctgtgcg gcgcgacctt
     2161 cctgccccgg ccaccgcgcg agcagagctt caacgccctt gcctgccact accgttgccg
     2221 cgacggcggc tggctgctgc tggcgctcgt caacgaggac aagcactggc ccgttctggc
     2281 gcagtgcctc ggccgcgaag aactgccctc cgacccgcgc ttctcaagtc ggtccgcgcg
     2341 ctccgcgcac tcggccgaac tgatcgcaat cctcgaccag gcgttcgcga cccgcgacag
     2401 cgccgaatgg cgagcgctgt ttaccaagaa cggtctcgtc ttcgaagcgg tcgcgcagat
     2461 gagcgaaatc ccgcgcgacc cgcagatgct cgagaccggc gttctgcgcc cgttcgagaa
     2521 cgacacgttg ctcacggtcg acagcccgtt cttcgtcacc ggcgcgaaga aggcgactgc
     2581 gcgcaagccc ccggcgcttg gcgagcacag cgagcagatc ctgcgcgagg cgggctatga
     2641 cgacgccgcg atcacgcaac tgcgcgagaa gaaggccttc gcgtgaacca tcgcaatttc
     2701 cgttaaactt tcagggagac cacaaatgac actcgaacca ttgcccggtg acttctacaa
     2761 ctttcagagc ctgttgaccc gcgaggagca ggacatcgtc gcgcgcgtca gagcgttctt
     2821 tcaggaaaag gtcgcgccca ttgccaacga cgcgtgggcc gcggccgagt ttccattcga
     2881 cctgataccc ggattcgcgg cgctggacat cgtcaagctc tcccacgagg gtgccaggag
     2941 tctgctgacc ggctggatca gcttggagat gagccgtgtc gatccgtcac actcgacctt
     3001 cttcggcgtg cactcggggc ttgccaccgg gaccgttcga agtttcggtt cggatgaaat
     3061 gctcgagcgc ctgctgcctg cgatgatgcg gatgcagaag atcggcgcgt tcgccctgac
     3121 cgagcccgaa ggcggttcgg atgtttcggc gggaatgcgc accgtcgccc ggcgcgaggg
     3181 ggaccattgg gtcctcaatg gcgcgaagcg ctggatcggc aatgcgacct ttgccgatct
     3241 tgtcatagta tgggcgcgcg acgaagccga caacaaagtc aagggcttcg tcgttgagaa
     3301 gggaacgccc ggcttcactg cgactaagat cgaacgcaag atggcgctcc gaaccgtgca
     3361 gaacgcggat atcgtccttg ccgattgccg cgtcccggag gccaaccgcc tgcagaaggc
     3421 gagaggattt cgcgataccg ccgaagtcct gcgccgcacc cgcgcgggcg tcgcctggca
     3481 atcggtgggc atcatgatgg gcgcctacga gaacgccctg gcatacgcga aaacccggaa
     3541 gcagtttgga aagccgatcg cgagctttca g
//
LOCUS       DATCWM010000008         2741 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_221472, whole genome shotgun sequence.
ACCESSION   DATCWM010000008 DATCWM010000000
VERSION     DATCWM010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2741)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2741)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2741
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_221472"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(94..1680)
                     /locus_tag="VIQ50_00120"
     CDS             complement(94..1680)
                     /locus_tag="VIQ50_00120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007601229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HEY9358807.1"
                     /translation="MSIVALRDENERLKALLAQTQATLSEHQAALAASEEARRRLETI
                     LGELRREKFGAKSEKLRPNQYHLPLEDVEIAQGVLDAAQEKAAAIIKGRSGGAPDQGR
                     HRNRGCLPAHLPRVERIIEPVSTLCPCGCGAMTKIGEDVSERLDVIPAQWRVLVTRRP
                     KYACRRCSGAVVQAHAPEHVVPGGLPTEAAIAHVIVSKFGDHTPFYRQAEIYARQGIR
                     LDRATLGNWSGRACFHLQPIGDHMRHHLAMAERLFMDETTAPVLDPGRGQTKKGYFWA
                     IVSDDRGHSGPSPPIVLFRYASGRSGAFAERFLDGFNGRFLQCDAYDGYDRLTEVARP
                     HGPWTLVHCWSHLRRRFVKLARNSKSPIAEAAVRQIAQLYAIEATVRASSPDIRLAAR
                     KEHSLPIVAALKPWFEKQLSMISSGSTLAEDIRYALNHWQGLTRFLEDGRLELDTNPV
                     ENAIRPVCLTRKNALFAGHEVGAENWALLASIAATCKLNNVNPVAYIAETLEAIIAGH
                     PQSKIEDLMPWRFRKTSSQH"
     gene            complement(1749..2102)
                     /gene="tnpB"
                     /locus_tag="VIQ50_00125"
     CDS             complement(1749..2102)
                     /gene="tnpB"
                     /locus_tag="VIQ50_00125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273520.1"
                     /note="TnpB, as the term is used for proteins encoded by
                     IS66 family insertion elements, is considered an accessory
                     protein, since TnpC, encoded by a neighboring gene, is a
                     DDE family transposase; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HEY9358808.1"
                     /translation="MIAPGADLKIYIATRPIDFRCGHDGLAAKVQEMLRLDPFNGSAF
                     VFRSKRADRIKILFWDRTGLVLVHKRLEGCKFVWPKIADGVMRMSPAMFAALFEGLDW
                     RLVRPEEARRPQASG"
     gene            complement(2099..2521)
                     /locus_tag="VIQ50_00130"
     CDS             complement(2099..2521)
                     /locus_tag="VIQ50_00130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEY9358809.1"
                     /translation="MGLDGKKDVHLDGSSVGTVSRLEVLEGPSGRRVRSEAERARIVA
                     ESLLPGAQVSDVARKHGATRWQIYDWRRRLRQRGELARRESPGASFAPLVVEVRAEEP
                     HVPAAQLEIAIGDIVVRTDAAIDGEQLSRVIRAVRASR"
BASE COUNT          497 a          913 c          819 g          512 t
ORIGIN      
        1 cgggcgttgt gaacttttgt tcacgcccag gggctgagcg tcaaaaaacg atccctccgg
       61 ccgaacagga gtaagcgctc gtccgcgacc ctattaatgt tggcttgatg ttttgcggaa
      121 tcgccatggc atgaggtctt cgattttgct ttggggatga ccggcgatga tggcttcgag
      181 cgtttcggcg atgtaggcga cggggttcac attgttgagc ttgcaggtgg ccgcgatgga
      241 cgcgagcaag gcccagtttt cagccccgac ttcatgaccg gcgaagagcg cgttctttct
      301 ggtcaggcac accggccgga tggcgttctc gaccggattg gtgtcgagct cgagacgccc
      361 gtcttcgagg aagcgggtca gcccctgcca gtgattgagc gcgtagcgga tgtcctcggc
      421 gagtgtcgag ccgctggaga tcatcgatag ctgtttctcg aaccacggct tcaacgcggc
      481 gacgatgggc agcgaatgct ccttgcgcgc ggccaaccgg atgtccggcg atgaggcgcg
      541 caccgtggct tcgatggcgt aaagctgtgc gatctgccgg actgcggcct cggcgatcgg
      601 cgatttgctg ttgcgcgcca atttgacgaa gcgccggcgc agatggctcc aacaatgtac
      661 gagcgtccac ggcccgtgcg gtcgagcgac ttcggtcagc cgatcatagc cgtcataggc
      721 gtcgcattgc aggaagcgtc cgttaaagcc gtccaggaac cgctcggcga atgcgccgct
      781 gcggccggac gcatatcgga acagcacgat cggcggactt ggaccgctgt ggcctcggtc
      841 gtcggagacg atcgcccaga agtagccctt tttcgtctgg ccacgcccgg gatcgagcac
      901 cggcgccgtg gtctcgtcca tgaacaggcg ctccgccatc gccagatgat ggcgcatgtg
      961 atcgccgata ggctggagat ggaagcaggc gcggccggac cagttgccca gcgtcgcccg
     1021 atcaagccgg atcccctggc gcgcataaat ctcggcctgt cgataaaacg gcgtatggtc
     1081 gccgaacttg gagacgatca cgtgcgcaat ggccgcttcg gtcggcagcc cgcctggcac
     1141 gacatgctcc ggtgcgtgcg cctgcacgac cgcgcccgag cagcggcggc aggcgtattt
     1201 cgggcggcgc gtgaccagca cgcgccattg cgccggaatc acgtcgaggc gttcgctgac
     1261 gtcctcgccg atcttcgtca tggcgccgca accgcacgga cagagcgtgc tcacaggctc
     1321 gatgatccgc tccacccgcg gcaaatgcgc aggcaggcag ccgcgattgc gatggcggcc
     1381 ttgatccggc gcgccgcccg atcgaccctt gatgatcgcc gcggctttct cctgcgccgc
     1441 gtccaggacg ccttgcgcga tctccacgtc ttcaagcggc aaatgatatt gatttggccg
     1501 cagcttctca gatttcgcgc cgaacttctc gcgtcgcaat tcgccgagaa tggtttccaa
     1561 ccgacgccgc gcttcctccg acgccgccag cgccgcctga tgctcgctca acgtcgcctg
     1621 cgtttgcgcc aaaagcgcct tcagccgttc gttttcgtcg cgcagcgcca cgatgctcat
     1681 gcgctatttc gagcacattg tcgccgcacg cgccacgtgc aaagagcttc cgagtcactc
     1741 tgccgcagct atcccgacgc ctgtggacgc cgcgcctcct ccgggcggac cagcctccaa
     1801 tccaggccct cgaacaaggc cgcgaacatc gccggcgaca tgcgcatcac gccgtccgcg
     1861 atctttggcc aaacgaactt gcagccttcg aggcgcttgt gcaccaacac caggcccgtt
     1921 cgatcccaga acagaatctt gatccggtcc gctcgtttcg atcggaacac gaaggccgag
     1981 ccgttaaacg ggtcgagacg aagcatctcc tgcaccttcg ccgcaagccc atcatggcca
     2041 cagcgaaagt cgatcggccg cgtcgcaata taaatcttca gatcagcgcc gggtgcgatc
     2101 atcgcgacgc ccgcaccgcg cggatcaccc gagacagctg ctccccgtct atcgccgcgt
     2161 ccgtccgcac cacgatgtcg ccgatcgcga tctccagctg ggccgccgga acgtgaggct
     2221 cctctgcccg tacttccacc accagcggcg cgaagctcgc tcccggagat tcccgacgag
     2281 ccaattcgcc gcgctgtcga aggcgtcgcc gccaatcgta aatctgccag cgcgtcgccc
     2341 cgtgcttgcg cgccacatcc gacacctgag cgccgggcag cagactctcg gcgacaatcc
     2401 gcgccctctc tgcctccgaa cgcacacgac gccccgatgg tccttcaagc acctcgagcc
     2461 ggctgacagt cccaaccgat gagccgtcca aatggacgtc ctttttgccg tccaatccca
     2521 tcccaaacct ccgtccaagc cggaggaatc ttcgcatgtt caattcgacc ccgataccag
     2581 ggcagctagc gagcgcttac agtaagacaa aaagcggtag cgatagtaaa cgcattcctc
     2641 gcacggaagg acagcggtcc gttgggacgc ggcttcagca tcatgacggg aggcgactgg
     2701 ttgttcttgg cttcaattgt ttggattgcc agtttgttag t
//
LOCUS       DATCWM010000009         2234 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_410406, whole genome shotgun sequence.
ACCESSION   DATCWM010000009 DATCWM010000000
VERSION     DATCWM010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2234
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_410406"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..204)
                     /locus_tag="VIQ50_00135"
     CDS             complement(<1..204)
                     /locus_tag="VIQ50_00135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007605021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9358810.1"
                     /translation="MQSGAMRAAAEPLPIDPALPELTSALRAAHAAVLVAPPGAGKTT
                     RVPLVLAAEPWAAGKKLIVLEPRR"
     gene            298..>2234
                     /locus_tag="VIQ50_00140"
     CDS             298..>2234
                     /locus_tag="VIQ50_00140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exonuclease H3TH domain-containing
                     protein"
                     /protein_id="HEY9358811.1"
                     /translation="MPSQAAASARSAAPVARAPKKGDHVFLVDGSSYIFRAYHALPPL
                     NRKSDGLQVNAVLGFCNMLWKLMRDMKPEEQPTHLAVVFDKSEKTFRSELYPNYKANR
                     TEPPDDLRPQFPLIRDAVRAFDLPCLEQLGFEADDLIATYVREACEAGATATIVASDK
                     DLMQLVNDCVIMYDTMKDRRIGIPEVIEKFGVPPQKMIEVQALIGDSTDNVPGVPGIG
                     VKTAAQLICEYGDLETLLARAGEIKQEKRRQSLIEHAERARLSKQLVTLDANVKLEVP
                     LADLAVHDPDYKRLIAFLKAMEFSTLTRRVAEFAGIDPAAIEADGKLMAGAAPSKPKT
                     PEQASLPLPVTVKPGTPGNEREGAARRAEDAEPEFTPQARAAARIAAARNAKIDRSRY
                     KIVGSLEQLDAWITRARELGAIAIDIQASSIDPMQAALCGFSLALTANEACYVPLAHR
                     KRGDGGDGSLFAGDIAPGQLEERAALAAMQPLLEDPEVLKVGCDLKFGLQMFAVRGSE
                     LTPYDDIMLMSYALDAGRSSHALTSLAQRYFDHAMVDDNVLTGSGKARITFDCVEVEK
                     AAEYAAERADITLRLWQVLKARLAAERVSSVYETLERPLIPVLARMERRGISIDRQVL
                     SRLSGEFAQRAGALEAEIQTLA"
BASE COUNT          403 a          766 c          731 g          334 t
ORIGIN      
        1 tcggcgcggc tcgagcacga tgagcttttt tcccgccgcc caaggttccg ccgccagcac
       61 gagcggcacc cgcgtggtct tgccggcgcc cggcggcgcg accaataccg ccgcatgtgc
      121 cgcgcgcagc gcagaggtca attccggcag cgccggatcg atgggaagcg gctcggcggc
      181 ggcgcgcatt gcgccacttt gcatgcgcgc cgcgcaggag ggaagccgcg ccgaagagcc
      241 gtgcacagcg ccgccgaagc ggtagcgaaa ccgtgcttca agtgttaagt cggaaccatg
      301 ccaagccaag ccgcagcgag cgctcgcagc gccgcgcccg tcgcccgggc gccgaagaag
      361 ggcgaccacg tcttcctggt cgacggctcc tcctacatct ttcgcgccta tcacgcactg
      421 ccgccgctca accgcaaatc cgacggcctg caggtcaacg ccgtgctcgg cttctgcaac
      481 atgttgtgga agctcatgcg cgacatgaag cccgaagagc agcccaccca tctcgccgtc
      541 gtgttcgata agtccgaaaa aaccttccgc agtgaactct accccaacta caaagcgaac
      601 cggacagagc cgcccgacga cctgcgtcca cagtttccgc tcatccgcga cgccgtacgc
      661 gcgttcgacc tgccttgcct ggagcagctg gggttcgagg ccgatgatct aattgcgact
      721 tatgtgcggg aggcctgcga ggcgggcgcg accgcgacca tcgtcgcctc cgacaaggac
      781 ctcatgcagc tcgtgaacga ctgcgtgatc atgtacgaca ccatgaagga tcgcaggatc
      841 ggcattcccg aggtgatcga gaagttcggc gtgccgccgc agaagatgat cgaggtgcag
      901 gcgctcattg gcgactcgac cgacaacgtg ccgggcgtgc ccggcatcgg cgtcaagacc
      961 gcggcgcagc tcatctgcga atacggcgat ctcgagacgc tgctggcgcg cgccggcgag
     1021 atcaagcagg agaagcgccg tcagtcgctg atcgagcatg ccgagcgcgc gcggctgtcg
     1081 aagcagctcg tcaccctcga cgccaacgtg aagctcgagg tgccgctcgc cgaccttgcg
     1141 gtgcacgatc ccgactacaa gcggctgatc gctttcctca aggcgatgga attttccacg
     1201 ctcacgcggc gcgtggcgga gttcgccggc atcgatcccg cggcgatcga ggcggacggc
     1261 aaactcatgg cgggcgccgc gccgagcaaa ccgaaaacgc cggagcaagc gtcccttcct
     1321 ctgcccgtga ccgtaaagcc gggcacgccg ggcaacgaac gcgagggcgc ggcacgcagg
     1381 gcggaggatg ccgaacccga gttcacgccg caggcgcgcg ccgccgcgcg catcgccgcg
     1441 gcgcgcaacg ccaagatcga ccgctcccgc tacaagatcg tgggcagcct ggagcagctc
     1501 gacgcctgga tcacacgcgc gcgcgagctc ggcgccatcg cgatcgatat tcaggcatcg
     1561 agcatcgacc cgatgcaggc cgcgctgtgc ggtttctcgc tcgcgctcac ggcaaatgag
     1621 gcgtgctacg tgcccctcgc ccaccgcaag cgcggtgacg gcggcgacgg cagcctgttt
     1681 gccggcgaca ttgcgcccgg ccagctcgag gagcgcgcgg cgctcgcggc catgcagccg
     1741 ctgctggaag atccggaagt gctcaaggtc ggctgcgacc tcaagttcgg cctgcagatg
     1801 ttcgcggtgc gaggcagcga gcttacgccc tatgacgaca tcatgctgat gtcctacgcg
     1861 ctcgatgccg gacgctcgtc tcacgcgctg acgtcgctgg cgcagcgtta tttcgatcac
     1921 gccatggtcg atgacaacgt cctcaccggc tcgggaaaag ccaggatcac cttcgattgc
     1981 gtggaggtcg agaaagccgc ggaatacgcc gccgagcgcg ccgacatcac gctgcggcta
     2041 tggcaggtgc tcaaggcgcg ccttgccgct gagcgcgtga gcagcgttta cgagacgctg
     2101 gagcggccgc tcattccggt gctggcgcgc atggagcggc gcggcatctc catcgaccgg
     2161 caagtcctct cgcggttgtc gggcgagttc gcgcagcgcg ccggcgcgct cgaagcggaa
     2221 atccagacgc tcgc
//
LOCUS       DATCWM010000010         4681 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_426618, whole genome shotgun sequence.
ACCESSION   DATCWM010000010 DATCWM010000000
VERSION     DATCWM010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4681
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_426618"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..247
                     /locus_tag="VIQ50_00145"
     CDS             <1..247
                     /locus_tag="VIQ50_00145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007590603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HEY9358812.1"
                     /translation="NVLTRTTAILAATFFATSLVLSALAGWDRKPHSIIQNTASPPQQ
                     QAPGAPLGPSGGVLDTLRQQEQQSPPPTPGPQVPRSQ"
     gene            456..2087
                     /locus_tag="VIQ50_00150"
     CDS             456..2087
                     /locus_tag="VIQ50_00150"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HEY9358813.1"
                     /translation="MARYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYL
                     NVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTGRPASRQDNITTGRIYQEILAKE
                     RRGDYLGATIQVVPHVTNAIKEFIRADNDGYDFVLCEIGGTVGDIEGLPFFEAIRQLG
                     NDLPRHHAIYIHLTLLPFVAGAGELKTKPTQHSVKELRSIGIQPDILLCRTDRPIPDS
                     ERAKLALFCNVRPSAVIEARDVDNIYAVPEAYHAAGFDREVLMAFGIEPPGEPDLARW
                     RLINERIRNPDGNVTIAIVGKYTGLKDAYKSLIEALSHGGIANKVRVNLDWIESEVFE
                     REDPSPFLENVNGILVPGGFGQRGSEGKIRAVKFARERQVPYFGICFGMQMAVVEAAR
                     NLCGIEEANSTEFGATPEPVVGLMTEWMKGNELQVRGVSGDLGGTMRLGAYPAILQRG
                     SRVSQIYHGATEISERHRHRYEVNTHYKGRLEQHGMHFSGMSPDGLLPEMIEYEDHPW
                     FVGVQFHPELKSRPFDPHPLFASFVGAAVDRSRLV"
     gene            2239..2568
                     /locus_tag="VIQ50_00155"
     CDS             2239..2568
                     /locus_tag="VIQ50_00155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NIPSNAP family protein"
                     /protein_id="HEY9358814.1"
                     /translation="MIYELRIYHCVSGRLPALLKRFETTTLDLWKRHGIRQAGFWTVL
                     VGDGGNQDLHYLLAWESLAEREAKWNKFMSDPEWLAKRAESERDGPIISSIKNMFLQP
                     TAFSAVQ"
     gene            2581..3438
                     /locus_tag="VIQ50_00160"
     CDS             2581..3438
                     /locus_tag="VIQ50_00160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY9358815.1"
                     /translation="MPGGLDHLAHAVRDLDAAAELYRRLGFTVGTRNRHAWGTHNRLV
                     QTPGFFVELLTVAEPEKLGSDGFSALFGTFNRLFLKDQEGLSLLILESSDAAADAARF
                     RSAGIGASDAMRFEREGKRPDGSTVKVGFSLAFARDAKAPAVGFAVCQQHFPENFWNP
                     AFQQHPNTVSDIAAAVVVSEDPRDHEAFLSSFTGVRADSESASGVTASTSRGKISVMD
                     PVAFRSRFAVAPPDVSRGARLAAAQFRVRDRAALSAALERGGIAASSSRGATIVGPQI
                     ALGATLVFD"
     gene            3535..4383
                     /gene="kdsA"
                     /locus_tag="VIQ50_00165"
     CDS             3535..4383
                     /gene="kdsA"
                     /locus_tag="VIQ50_00165"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HEY9358816.1"
                     /translation="MSVDPAPNPIVTVGTARFGNTLPLMLIAGPCALESREHALEMAS
                     ALKEIAGKAGIGLVFKTSFDKANRTSAKSQRGVGLDRALPIFAEIRETLSVPVLTDVH
                     EAQQCARVAGAVDVLQIPAFLCRQTDLLAAAAATGRVVNVKKGQFLAPWDMANVVAKL
                     TGAGNRNVLVTERGASFGYNTLVSDMRALPILARSTGAPVIFDATHSVQQPGGEGTSS
                     GGEREFVPVLARAAVAVGVAGVFIETHQNPDLAPSDGPNMVPLKNMEPLLRRLVEFDR
                     LAKNGT"
BASE COUNT          837 a         1510 c         1463 g          871 t
ORIGIN      
        1 gaatgtgctg acccgcacga cggcgatcct ggccgcgact ttctttgcca ccagcctggt
       61 gctctcggcg ctcgccggct gggaccgcaa gccacactcc atcatccaga acacggccag
      121 cccgccacag cagcaggcac ccggcgcacc gctggggcca agcggcggcg tgctcgacac
      181 gttgcgccag caagagcagc aatcgccgcc gccgacgcct gggccgcagg taccgcgctc
      241 gcaatgagca agctcgcagg ggccgggtaa ccggcccttc gcatgaggag ccatgcaatc
      301 ggcgaatggt aaattgacaa ctcacatgaa aagaccgtcc catatcccga tcagatcatg
      361 agcatttttc gatatgcgca ttgcgcatgg atctcgggcg agggcgctcg aaacctctcg
      421 tcgaatcgct tgcgcagcgt taaaggttag gtcccatggc gcggtacatt ttcattaccg
      481 gcggcgtggt ctcctccctc ggcaagggtc tcgcgtccgc agcgctcggc gcgctgttgc
      541 aggcgcgcgg ctacaaggtc cggctgcgca agcttgatcc ctacctcaac gtcgaccccg
      601 gcacgatgtc gccctaccag catggcgagg tcttcgtcac tgacgacggg gccgagaccg
      661 accttgatct gggccattac gagcgtttca caggccggcc ggcaagccgt caggacaaca
      721 tcacgaccgg ccgcatctat caggaaatcc tggccaagga acgccgcggc gactacctgg
      781 gcgctaccat ccaggtggtt ccccatgtga ccaacgcgat caaggagttc atccgcgcgg
      841 acaacgacgg ctacgatttc gtcctgtgcg aaatcggtgg gacggtcggc gatatcgaag
      901 gactgccgtt cttcgaggcc atccgccaac tcggcaatga tctgccgcgc caccacgcca
      961 tttatatcca cctcacgctc ttgccgttcg tcgccggcgc gggcgaactc aagaccaagc
     1021 cgacccagca ctccgtcaaa gaactgcgat cgatcggcat ccaacccgac atcttgctgt
     1081 gtcggaccga ccgaccgatc cccgacagcg agcgcgcaaa gctcgccctg ttttgcaatg
     1141 tgcgcccgag cgcggtgatc gaagcgcgcg atgtggacaa tatttacgcg gtgcccgaag
     1201 cctaccatgc ggcagggttc gaccgcgaag tgctgatggc cttcggcatc gagcccccag
     1261 gcgagcccga tctcgcgcgc tggcggctga tcaacgagcg catccgcaac ccggacggca
     1321 atgtgacgat cgccatcgtg ggcaaatata ccggcctcaa ggatgcctat aagtcgctga
     1381 tcgaggcgct ctcccacggc ggaatcgcca acaaggtgcg cgtcaatctc gactggatcg
     1441 aatccgaagt gttcgagcgc gaggatccgt cgccgtttct ggagaacgtc aacggcattc
     1501 tggtgccggg cggattcggc cagcgcggca gcgagggcaa gatcagggcg gtgaagttcg
     1561 cgcgcgagcg tcaagttcca tatttcggca tttgcttcgg gatgcagatg gccgtcgtcg
     1621 aagcggcgcg taacctttgc ggcatagagg aggcgaactc gaccgagttc ggcgctactc
     1681 ccgagccggt ggtcggattg atgacagagt ggatgaaagg caacgaactg caggtccggg
     1741 gagtgagcgg cgacctcggg ggcaccatgc ggcttggcgc ctatccggcg atccttcagc
     1801 gcggcagccg cgtgtcacag atctaccacg gtgccaccga gatttccgag cgccatcgcc
     1861 accgctacga ggtcaacacc cattacaaag gccggctcga gcagcacggc atgcactttt
     1921 ccggcatgtc ccccgatggg ctattaccgg agatgatcga atatgaagat catccctggt
     1981 ttgtcggcgt gcagtttcac cccgagctga aatcgcggcc gttcgatccg catccgctgt
     2041 tcgcctcctt cgttggcgcg gcggtggacc ggagccgtct ggtctaatca gccacccccg
     2101 atctcgctca ttggcttggt ttcgcccatc agctcggcgc ggcgtgggca tcgctgatat
     2161 cccgacactg cccgattgcc tttccagccc ctgccattaa cgtcggcgac cccgacgtgc
     2221 gtcatgcaag aggcaaccat gatctatgag ttgaggattt atcactgcgt gagcgggcgg
     2281 ctgccggcct tgttgaagcg gttcgaaacc accacgctcg acctctggaa gcggcacggc
     2341 attcgccaag ccgggttctg gacggtgctg gtcggcgacg gcggaaatca agatctccat
     2401 tacctgctcg cttgggagtc gctcgccgag cgcgaggcaa agtggaacaa gttcatgagc
     2461 gatccggaat ggctggcaaa gcgcgccgaa agcgagcgcg atggaccgat catttcctca
     2521 atcaagaaca tgttcctgca gccgacggcg ttctcggcgg tgcagtgaaa gcagcatttc
     2581 atgcccggcg ggcttgacca tcttgcccat gcagtgcgcg acctcgacgc ggcggccgag
     2641 ctttatcgcc ggctcggctt taccgttggc acgcgcaacc ggcacgcatg gggcacgcac
     2701 aatcgtttgg tccaaacgcc cggctttttt gtcgaattgc tgacggtagc ggagccggaa
     2761 aagctcggaa gcgacggctt ttcggccttg ttcggcacgt tcaaccggct gtttctcaaa
     2821 gaccaggaag ggctgtcgct gctgatcctc gaaagctccg atgcggcagc ggatgccgca
     2881 cgttttcgct cggccggcat cggcgcctcc gatgccatgc gcttcgagcg cgagggcaaa
     2941 cggccggacg gctcgaccgt caaggtcggg ttctcgcttg cgtttgcgcg tgatgccaaa
     3001 gcgccggcgg ttggctttgc cgtttgtcag caacactttc cggaaaattt ctggaatccg
     3061 gcgttccaac agcatcccaa tacggtcagc gacatcgcgg ccgcggtggt ggtctccgaa
     3121 gatccgcgcg accatgaggc gtttctatcg tccttcaccg gcgtgcgcgc ggactctgag
     3181 agcgcgagcg gcgttaccgc gtcgacatcg cgcggtaaga tcagcgtgat ggatcctgtt
     3241 gcatttcgca gccggttcgc ggtcgcgccg cccgatgttt cccgcggcgc gcgcctcgcc
     3301 gccgcgcaat ttcgcgtccg cgatcgcgcg gcgctgagcg ccgcattgga gaggggcggg
     3361 atcgcggctt cctcgtcgag gggcgcaacc atcgtcgggc cgcagatcgc cctgggcgca
     3421 acactggttt tcgattagca ggccgcgctt tcggatgcgc cgatccgggc gagcggagtc
     3481 ggcaacatcc cgctcggttg accccaaaat accaccggcg catggtcgcc caccatgagt
     3541 gtcgaccccg ctcccaatcc gattgtcacc gtcgggacgg cgcgcttcgg caatacgctt
     3601 ccgctgatgc tgatcgcggg gccctgcgcg ctcgaaagcc gcgagcacgc gttggagatg
     3661 gcctcggctc tcaaggagat tgccggcaag gcgggaatcg gcctcgtctt caagacgtcg
     3721 ttcgacaagg ccaatcgcac cagcgcgaaa agtcagcgcg gcgtggggct cgatcgcgcc
     3781 ttgcccatct tcgccgagat ccgcgagacg ttaagcgtgc ccgttctgac cgacgtgcac
     3841 gaagcgcagc aatgcgcacg cgttgctgga gccgtggacg tgctgcagat acccgcgttc
     3901 ctgtgccggc agaccgatct ccttgctgcg gccgccgcca ccgggcgcgt cgtcaacgtc
     3961 aagaagggcc aattcttagc gccttgggat atggcgaacg tcgtcgccaa gctgaccggc
     4021 gccggcaatc gcaacgttct ggtgaccgag cgcggcgcct ccttcggcta caacacgctc
     4081 gtctcggaca tgcgcgcgct gccgatcctt gcgcgcagca ccggggcgcc ggtgatcttc
     4141 gacgccacgc attccgtgca gcagccgggc ggggagggga cctcctccgg aggcgagcgg
     4201 gaattcgtcc cagtgctcgc gcgcgcggcg gtcgccgttg gtgtggccgg cgtcttcatc
     4261 gaaacgcacc agaatcccga cctcgccccg tcggatggtc ccaacatggt gccgctcaag
     4321 aacatggagc ctttgctgcg ccgcttggtc gaattcgacc gactcgcgaa gaacgggaca
     4381 taatcatttg atgatcaatc gttttcgcca tcggccagtc ctgagtgctt ctgtgggggg
     4441 ttcgcaatct ttggccccac ctgccttgag ttcgtgttgt ccggagcgcc gcgtcccttc
     4501 cattgagcca acctgccggc ggtgccgagc atgacgtgat cctcaagcgg cggtgccgcg
     4561 cgagcgatgc ttccggctcg atgccttggt cgtgcgtggt ttggcggttg gcctatgatc
     4621 cgccgcggca gagggcgccg ccaacgctct tgtgcaatgg tgcgggaatg cccatcatgg
     4681 t
//
LOCUS       DATCWM010000011         3040 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_324041, whole genome shotgun sequence.
ACCESSION   DATCWM010000011 DATCWM010000000
VERSION     DATCWM010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3040
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_324041"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..190
                     /locus_tag="VIQ50_00170"
     CDS             <1..190
                     /locus_tag="VIQ50_00170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9358817.1"
                     /translation="PAPIIKKISQEVAAILATPGEHAAAHTLTAAIAYEDDETFARFL
                     AGESVKWKQALASLDLGQ"
     gene            complement(256..1041)
                     /locus_tag="VIQ50_00175"
     CDS             complement(256..1041)
                     /locus_tag="VIQ50_00175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007611220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HEY9358818.1"
                     /translation="MQFAGAEAAGSRAWIAPAAATMLLAMAHGAAAQRALPLGFVYLR
                     DVEPSIAQDIRYAGSDNFVGRPLPGYDAAECILRQEVAAALKRVQAGLRAGGLSLKVY
                     DCYRPTRAVRAMVQWANDGRGQVSTKRFFPKLPKSSLLSGYIASRSQHSTGNAIDLTL
                     TKTDAAPAAPFNPAATYGPCAGPVAQRSPDNSVDMGTSFDCFDSASHTASSAVTAEQR
                     RWRNMLVEAMRKQGLANYHREWWHFSYARSAGTAAYDFPIRPR"
     gene            1153..1749
                     /locus_tag="VIQ50_00180"
     CDS             1153..1749
                     /locus_tag="VIQ50_00180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9358819.1"
                     /translation="MTLRNILLLGLASLICGCESRLGSDEAGLIDAVAFVTGGQQEGD
                     LPQGFETRWRRTVEGRAIRYETIRQNPGFGEENDPHRGSRHVKVGVSISSPQKCVFKT
                     VIMTAYSRGGSKESFEPPSNETTTLDFNKVQRIDIEDGDRPSIVIDGKAWQCKDGKCQ
                     DRTMIGISAPRPEDLPRVIESKRRAVDFITKSCLGTQR"
     gene            1857..2396
                     /locus_tag="VIQ50_00185"
     CDS             1857..2396
                     /locus_tag="VIQ50_00185"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY9358820.1"
                     /translation="MPDDGELGTREVHQTAIGGEHVLIRRARPEDVALYRDFLAGVST
                     EDLRLRFFANVGELSAEEMDKLRHLDYRHEMAFIALDEDTGQMLGLVRLKDELDERTA
                     EFAILVRSRLKGHGVGFLLMRRVIDYAKEKGLRRVYGDVLAENAPMLQMCAELGFHAL
                     DMGSDFRRVVLDLEDADRR"
     gene            complement(2373..>3040)
                     /locus_tag="VIQ50_00190"
     CDS             complement(2373..>3040)
                     /locus_tag="VIQ50_00190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9358821.1"
                     /translation="LDVLYGAEVVQTARPFAGSDLGRRVRVTWQGAEYRGRGRETMWQ
                     GKLTLTGNRIARFAPVNFLNPERKVVEASPGAALAWSSVTTGNLAGIDIWLDEARRGT
                     LALETNIVSGEVDLATLDDGTVAFDGGGLARRISVYRLPEQDWSRRLALEHVTTFAGG
                     ADLPVYARDPERRSPGVVESDLPDRLRKRADAVSHVASASPPSRAGVEEGSGWRSAAV
                     GVF"
BASE COUNT          591 a          942 c          988 g          519 t
ORIGIN      
        1 tccagcgccg atcatcaaga agatctcgca ggaggtcgcc gccattctgg cgacgcccgg
       61 cgagcacgca gccgcccaca ccctgaccgc cgcgattgcc tacgaggacg atgaaacgtt
      121 cgcacgcttc ctcgccggcg agtcggtaaa atggaaacag gcgttggcgt cactcgatct
      181 ggggcagtag atgcgagaat cggtccgccg cgaaccccac atccaatgtg gatttcgaag
      241 catgcgctcg cgccgttatc gcgggcggat cggaaaatca tatgccgccg tgccggcgga
      301 tcttgcgtag gagaagtgcc accactcgcg gtggtagttt gccaatcctt gttttcgcat
      361 ggcctcgacc agcatgtttc gccagcgccg ctgttcggcg gtcacggcgg agctggccgt
      421 gtggctcgcg gaatcgaaac agtcgaagct cgtgcccata tcgacgctgt tgtcggggct
      481 gcgctgggcg acggggccgg cgcacggtcc gtaagtggcg gccggattga atggcgcagc
      541 tggcgccgcg tcagtcttgg tcagcgtgag gtcgatcgcg ttgccggtcg aatgctggga
      601 ccgcgaggcg atatagccgc tgagcagcga gctcttcggc agcttcggga agaaccgctt
      661 ggtcgacact tgcccgcggc cgtcgttcgc ccactgcacc atggcgcgca cggcacgcgt
      721 ggggcgatag caatcataaa ccttgagcga gagtccccca gcgcgcagcc ccgcctgcac
      781 gcgcttgagc gcggccgcga cctcctgtcg gagaatacac tccgcggcgt catagccggg
      841 cagcggccga ccgacgaaat tgtcggagcc ggcgtagcga atgtcctgcg cgatgctcgg
      901 ctcgacgtcg cgcaggtaaa cgaagcccaa tggcaacgcg cgctgcgcgg ccgcgccgtg
      961 cgccatggcg agtagcatcg tcgcggcggc gggagcgatc catgctcgag atccggccgc
     1021 ttccgcgcca gcgaattgca tccaatctcc taggaggacg acccgcggtc gagtatatat
     1081 cgaattatcg atgctcggtc acaggctatc tgaggtccga tgaaaaccgc ggggcacgcc
     1141 aggaagcgac atttgacgct tcggaacatt ctgctgctgg gattggcaag cctgatttgc
     1201 ggatgtgaaa gtcgcctcgg ctcggatgag gcgggtttga tcgatgcggt tgcgttcgtc
     1261 acgggcggcc agcaggaggg tgatctcccc cagggattcg agacgcgctg gcggcggact
     1321 gtcgagggac gggcgatccg atatgagacg atccggcaaa atcccggctt tggcgaggaa
     1381 aacgacccgc accgcggcag ccgtcatgtc aaagtcggcg tgagcatctc ctcgccgcaa
     1441 aaatgcgtgt tcaagacggt gatcatgacc gcttattcca ggggcgggag caaggaaagc
     1501 ttcgagccgc cttcgaacga aacgacgacc ttggatttta acaaagtaca acggatcgac
     1561 atcgaagacg gcgatcgtcc cagcatcgta atcgatggca aagcctggca atgcaaagac
     1621 ggcaaatgcc aggatcgcac gatgatcgga atttccgcgc cgcggccgga agacctgccg
     1681 cgcgtgatcg agagcaagcg gcgtgccgtc gacttcatca cgaagagttg cctgggaacg
     1741 cagcgctagc tcactggacg ggcgctctgt ccgctttcgc caggggaaag ccgagaccgc
     1801 cgtttgcctg cagccgtcaa ttcgcataaa tccgaaggca gcggaaaggg gcgccaatgc
     1861 cggacgacgg agagcttggc acgagggagg tgcatcaaac tgccatcggc ggcgagcacg
     1921 tgctgatccg ccgggcgcgg ccggaagacg tggcgttgta ccgggatttt ctagccggcg
     1981 tcagcaccga ggatctccga cttcggtttt ttgcgaacgt tggcgagctt agcgcagagg
     2041 agatggataa gctccgccat ctcgactacc gccacgaaat ggctttcatc gcgctcgatg
     2101 aagacacggg ccagatgctc gggctcgtgc gcttgaagga cgagctcgac gaaaggaccg
     2161 cggaattcgc gatcctggtc cgctcgcggc tcaaaggcca cggagtaggc tttctcctga
     2221 tgcggcgcgt catcgattac gccaaagaaa aaggtctacg gcgcgtgtac ggcgatgtgt
     2281 tggcggaaaa cgcgcccatg ctgcaaatgt gcgccgagct tggtttccat gccctggaca
     2341 tgggatcgga cttcagacgc gttgtgctcg atctagaaga cgccgaccgc cgctgaccgc
     2401 cagccgcttc cctcctcaac gcccgctcgt gagggaggag aagcggacgc aacatgactg
     2461 acggcatccg ctcgctttct caagcgatca ggtagatcgg actcgaccac gcctggtgac
     2521 cgtcgctctg ggtcacgcgc atagaccggc aggtcggcgc cacccgcgaa ggtcgtaacg
     2581 tgctcgagcg caagccgccg gctccaatcc tgctccggca atcgatagac gctgatgcgc
     2641 cgggcaagcc cgccgccgtc gaaggcgacc gtgccgtcgt cgagcgttgc gagatcaacc
     2701 tcgccggaga cgatattggt ttcgagcgcg agcgtcccgc gccgcgcctc gtcgagccaa
     2761 atgtcgatgc cggccagatt gccggtggtc accgaactcc aggcgagcgc ggcgccgggg
     2821 ctcgcctcca cgacctttcg ttccggattg agaaagttca ccggcgcaaa ccgcgcgatg
     2881 cgattgccag tcagcgtcag tttcccctgc cacatcgtct cgcggccacg accgcggtac
     2941 tctgcgcctt gccaggtcac gcgcacacgg cggccgagat cggagcccgc aaagggccgc
     3001 gccgtctgca ctacctcggc gccgtacagc acatcgaggc
//
LOCUS       DATCWM010000012        11730 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_459003, whole genome shotgun sequence.
ACCESSION   DATCWM010000012 DATCWM010000000
VERSION     DATCWM010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 11730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11730
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_459003"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1177)
                     /locus_tag="VIQ50_00195"
     CDS             complement(<1..1177)
                     /locus_tag="VIQ50_00195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015315626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HEY9358822.1"
                     /translation="MLDVVKSVVPSIPFDADRLDRLMDDAGIDLLVATSKHNVQYLLG
                     GHRAFFFESMDAMGLSRYLPVLVYPKGARQKAAYFGHRMEGFQKENSPFWVSESQTNS
                     SGTLDAMQKAIDYVRKSGAKPRRIAAELAFLPVDAGNALRNAFADSEIVDALFVLERL
                     RAVKSPEELRKLRIASERVIESMLAVIASHGPGASKRELTEALRREETNRGLVFDYCL
                     ITAGSSLNRAPSDQKWNKGDVLSLDSGGNYHGYIGDLCRMAIHGEPDAELEDLLAEIE
                     QIQRAAMKPIKSGTVAGAVYAAAEPLVQKSKHHNHMHFLAHGMGLVSHEAPRLTATGP
                     VPYDAYDANRPLEAGMVVSVETTLQHPQRGFIKLEDTVAVTQAGFDIYGEGGRGWNRG
                     "
     gene            complement(1354..2112)
                     /locus_tag="VIQ50_00200"
     CDS             complement(1354..2112)
                     /locus_tag="VIQ50_00200"
                     /inference="COORDINATES: protein motif:HMM:NF005451.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEY9358823.1"
                     /translation="MNIRAKANPATTMSPAEWESRVDLAAVYRLVAHYGWDDVIYNHC
                     SMRVPGEDRKFLMKRHELLWTEVTATNLVKVDMDEDLDEHSGVNRPGFTLHGGILRGR
                     PDVNCAVHVHTQTGMAIAGLKSGLRMLSQEAVRFFGYIGYHPYEGITEDFGERERLIA
                     HLGSNRAMIMHNHGALTVGKTAREAFILMKHLLEAAEIQLAMEATGGELIEIPPETCK
                     KTLLQYEKHDSGRGSADWPAYLRMLDRLDPSYRT"
     gene            complement(2213..2659)
                     /locus_tag="VIQ50_00205"
     CDS             complement(2213..2659)
                     /locus_tag="VIQ50_00205"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEY9358824.1"
                     /translation="MESLYQSLAPWAEALLRAVVGLALVPHGLRNTFGLFPSTGVQSH
                     NLTELAKQLDRDGYRPGRLWAPAISLTQLVAGPMLALGLFTRLAACPILIFLIVSNYE
                     RWRVGGYFWNKAGLEYTLMWTVAALYFLVHGGGAISLDHLLLGREF"
     gene            complement(2672..3508)
                     /locus_tag="VIQ50_00210"
     CDS             complement(2672..3508)
                     /locus_tag="VIQ50_00210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016556174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEY9358825.1"
                     /translation="MQKWNMIIDVAECTNCNLCTLAVMDEYVGNAWPGYSAPMPKHGH
                     KWINILQKERGQVPMIDIAYVPTMCNHCDHAPCIAKAGDAVKKREDGIVLIDPEKARG
                     RKDLVEACPYGHIWWNEELQLPQIWPFDAHLLDQGWQQTRGQQSCPTGAMRAIKLEDE
                     EMARMARDQGLEVMKPELGTRPRVYYRNLWRYSKCFIGGTLSAERNGVIDCVEGASVR
                     LVKDGRTVAETTSDNYGDFKFDKLEEGSGSYRVEISATGRGATSVEAVLGASINLGEI
                     RL"
     gene            complement(3582..6629)
                     /locus_tag="VIQ50_00215"
     CDS             complement(3582..6629)
                     /locus_tag="VIQ50_00215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007534371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEY9358826.1"
                     /translation="MLSAMKFRIILWGMAQLLWYVAWRHPAFRARLKERNLVAQLKAR
                     DEEIGRWYAIRDGKVTSGGGLRADADVTLAFKTAAVGADLLMPPINWLDQINAQKDFK
                     LTVEGPEDLSNWFAQTIMLSQSVGLEIGTLLADGTMRYCNMTNGGPVFVYVKDGKIIR
                     MTPIDLAADDPPPWSIDARGLTFTPPRKTTLAPHGQNAKSIIYSPDRLLYPMKRVDFD
                     PKGQRNPQNRGKSAYVRISWEEALDLVAGEIKRLKRAYGPGVMAVSHGSHHTWGNIGY
                     YLSALFRFRNAVGYTQIHHNPDSWEGWYWGAVHHWGYTLRVGQSETYGTVEDCLQNCD
                     MIVFWAADPESTSGSYGAQEGTVRRQWLKNPKLGIKVVHVDPYYNASAQFLPGKWFAP
                     RPTTSVAMAMAIAHVWIKEDLYDKAYVASHTVGFDKWKAYLLGEEDGIAKTPEWQEKE
                     TGVAAKDVRALAREWGRKRVYLAPGGWGNGHGGACRNQTGIQWARVMVCLTAMQGLGK
                     PGVNMGNLQWGCPLDFQFYFPGYADGGMSGDLENTAMPVELYQRMPQLPSMSTTFQRI
                     PRLRTPEAIADGKAEGYPWVGKSIEHQFAKFSYPAPGHAPVRMMYKYGGSILSTMNNT
                     NRWVRMYQSPNLEFVVNQSIWFEGEAKFADVILPACTNFERVDISEWAGLGGYGHHGQ
                     QQLNHRVIIFQAPAIAPLGESKSDFWIFNEICKRLGLANYFSEGVNEIDWVKRVYLAS
                     DLPKVISWKKFVKRGYYVVPAEKEKLRAPVSFRWFWENRKKDVPEAQPLPSDYAEEYL
                     RGLQTQSGKLEFECNSLKRFNDPERPPIVKYEPSWEGPHSGEMFERYPLQMLTPHSKY
                     SFHTQGDGKDSFLLNIEDHRVNVDGYYYWIMRLNAEDAAERGIKKHDLVKVFNDRGAV
                     ICAALPTQRLPRAVCHGYESSAIYDPMGEPGKSVDRGGCLNLLTPERTQTASTHSIAG
                     ANALVEVELWDGRTEHMSETFARMEKDKEVREALKAAQLVPAK"
     gene            complement(6743..7708)
                     /locus_tag="VIQ50_00220"
     CDS             complement(6743..7708)
                     /locus_tag="VIQ50_00220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9358827.1"
                     /translation="MRASIVVAALALPISWSPACLAQDYPTRPVKIIVPFGAGGPADV
                     YSRVLAQHLSEALKEPFVVEDRPGAGSIIGTDAVAKSPPDGYTLLAMSNTHTTNESLI
                     AHKPFQLMRDFVPVAGINYSDLVMVIHPSVPAKDLKEFIAYAKSKPGELNYASSGAGT
                     PYHMAGELFKAMSGTNLVHVPHKASGEMRNSVIGGHVQMAFDAITTMTPNVKAGQVRA
                     LGTSAAKRSSVLPDVPTIAEAGVPGYESTIWLGIMAPAGTTKAIVDKLNAEINKAITR
                     PDVKEAWDKQGAVPLVMSPAEFEKYLRADIEKWAHVVQVSGIKAD"
     gene            8034..8513
                     /locus_tag="VIQ50_00225"
     CDS             8034..8513
                     /locus_tag="VIQ50_00225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020508653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEY9358828.1"
                     /translation="MSIGSTESSHPSLSHADSLAASTADTFLLVGRVLLGWLFLASSA
                     GIGGKLWNHAGFLGYLKNLGAPAPEVSSWVGAVVEFLIGAALVLGVGTRYAALLCALF
                     LIAATALAHRYWEYPAAQMGNQYNHFLKNVAVFGGALILFVAGPGRFSIDRMLSKRG"
     gene            8604..9065
                     /locus_tag="VIQ50_00230"
     CDS             8604..9065
                     /locus_tag="VIQ50_00230"
                     /inference="COORDINATES: protein motif:HMM:NF016089.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEY9358829.1"
                     /translation="MAEAISRHYIPALGSIYGAVERYAEPILRITLGGILIPHGMQKL
                     FGAFGGMGFAGNATLFDRIGFTPGIFWGTLVGCTELIGGILLVLGLLTRFAAAAVLIF
                     MIVAVKFTSAKGFFWSQGGWEYPLLIGVCALFFLMRGGGTCSLDRAIGREL"
     gene            complement(9109..10275)
                     /locus_tag="VIQ50_00235"
     CDS             complement(9109..10275)
                     /locus_tag="VIQ50_00235"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HEY9358830.1"
                     /translation="MKRSIDRILTTHVGSLIRPQPLQAFLRAKQGGKAFDANGYAACL
                     TEAVAAIVRRQAEAGIDVVSDGEFGKSISWSQYALERLSGFERRPVKQGANPFQRGAD
                     RRRFGEFYAELDAREEIATTTEAICIGPIAYTGQAELERDIKNFKAALDGVGVEEAFL
                     PVASPASVIPDRKNEYYRSDEECLAAIAAAMRTEYKMIVDSGFLLQLDDARTAVTYDR
                     MVPPASFAEYREWVAMHVEVLNHAIEGLPPERIRYHVCWGSWPGPHTTDVPLKDIVDL
                     ILKVKVGAYVIEGANPRHAHEWKVWEEVKLPEGKALIPGVISHATNVVEHPELVAERI
                     VRYAELVGRENVLAGTDCGFAQGPFYRRVHSSIMWAKLEALAQGARLASKALWP"
     gene            10481..11344
                     /locus_tag="VIQ50_00240"
     CDS             10481..11344
                     /locus_tag="VIQ50_00240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY9358831.1"
                     /translation="MAPDLSRCILGASFAFVLIVQGQAAELNPAALVYQLPDQIKWNP
                     PSAEGVQNAVLVGDPSKPGLYLQRTKWLQGNHFSRPHFHPNDRFITVLSGTWWMGSGT
                     NFDPDNAVALPPGTFVTHFGKQVHWDGAKTEDASLLIFGEGPGTSTRVETTAGKFSGL
                     DPKAVVYTLPDQYKWRDPTGAAGVNQVVLHGDPSQSGPYVVLNRFKPGNFSKPHFHPN
                     DRFITVIKGTWWVATGNKFDKENTVPMPAGSFVTHFAKQVHWDGAKDEETWLLIVGEG
                     PATLTLVDVAN"
     gene            11368..>11730
                     /locus_tag="VIQ50_00245"
     CDS             11368..>11730
                     /locus_tag="VIQ50_00245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008130867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEY9358832.1"
                     /translation="MRVSEDIVAAIGNTPLIKLERASAATGCTILGKAEFMNPGQSVK
                     DRPARQIILEAEKRGEIRPGGLIVEATAGNTGIGLALVANARGYRTLIVIPNTQSQEK
                     KDMLRLCGAELVEVPAAPY"
BASE COUNT         2075 a         3737 c         3659 g         2259 t
ORIGIN      
        1 cgccgcggtt ccagccgcga ccgccctcgc cgtagatatc gaagccggcc tgagtgaccg
       61 cgaccgtgtc ttcgagcttg atgaacccgc gctgcggatg ctgcagcgta gtctcgaccg
      121 aaaccaccat tccggcttcc agcgggcggt tggcatcgta ggcgtcatat ggcaccggac
      181 cggttgcggt gagccgcggc gcctcgtgac tgaccagccc catgccgtgg gcgagaaagt
      241 gcatatgatt gtggtgcttg gatttctgca ccagcggttc ggccgccgcg tagacggcgc
      301 cggcaaccgt tcccgacttg atcggcttca ttgccgcgcg ctggatctgc tcgatctcgg
      361 ccaaaaggtc ctcgagctcc gcatccggct cgccgtggat cgccatccga cagaggtcgc
      421 cgatgtagcc gtgataattg ccgccggaat ccagcgagag cacgtcaccc ttgttccatt
      481 tctggtccga cggcgcgcgg ttgagactcg atcccgctgt gatcaggcaa tagtcgaaca
      541 ccaagccgcg gttggtctcc tcccggcgca gcgcttcggt gagctcgcgc ttgctcgcgc
      601 ccggaccatg actggcgatc accgccagca tcgattcgat cacgcgctct gaggcgatgc
      661 gcagcttgcg caattcctcg gggcttttca ctgcgcgcag ccgctcgagc acgaatagcg
      721 cgtcgacgat ctcgctgtcg gcgaaggcat tgcgtagcgc gttgccggcg tcgaccggca
      781 ggaacgcgag ttcggccgcg atccgccgcg gctttgcccc ggatttgcgc acgtagtcga
      841 tcgccttctg catggcgtcg agggtgccgg acgaattggt ctgcgactcc gacacccaga
      901 acggactgtt ttccttctga aagccttcca tgcgatgccc gaaataagcg gccttctgcc
      961 gggctccctt gggataaacg aggaccggca gatagcggct caatcccatc gcatccatgg
     1021 actcgaagaa aaaggcgcga tggccgccga gcagatactg cacattgtgc ttggaagtcg
     1081 cgaccaggag atcgatcccg gcgtcgtcca tcagacggtc cagccgatcg gcgtcgaacg
     1141 gaattgaggg gacaacgctt ttgacgacgt cgagcatgat ggaagctcct tgtggaccga
     1201 ccgcggcggc ctagatagcg ctcgcgcgca gcacgatgga cagcgggatc atacactagc
     1261 gcggcgcgat ccgactatgc cttctggtca tgggaggtgc ctcgcgcggc gccctcgcgc
     1321 gcggaacaaa tctgttgtgc cgagcttcgc ccgtcaggtc cgataactgg gatcgagacg
     1381 gtcgagcatg cgcagatagg ccggccagtc agccgagccg cggccgctgt cgtgcttttc
     1441 gtattggagc aacgtcttct tgcaggtttc gggcgggatc tcgatcagtt cgccgccggt
     1501 tgcttccatg gccaactgga tttcggcagc ttccaacaga tgcttcatca ggatgaaggc
     1561 ctcacgcgcg gtcttgccca ccgtgagcgc gccatgattg tgcatgatca tggcgcggtt
     1621 gctgccgaga tgggcaataa gccgctcgcg ttcgccgaaa tcctcggtga tgccctcgta
     1681 gggatggtaa ccgatgtagc cgaagaagcg caccgcctcc tgcgagagca tccgcaatcc
     1741 gctcttgagt cccgcaatcg ccattccggt ctgggtgtgc acgtggacgg cgcagttgac
     1801 gtccggccgc ccgcgcagga ttcccccatg cagcgtgaag cccggacgat tgaccccgga
     1861 gtgctcgtcg aggtcctcgt ccatgtcgac cttgaccagg ttcgtggcgg tgacctcggt
     1921 ccataagagc tcgtgccgct tcatcaggaa ctttcgatct tcgccaggaa cgcgcatgga
     1981 gcagtggttg tagatgacgt cgtcccaacc gtaatgcgcc acgaggcgat agaccgccgc
     2041 gaggtcgacg cggctctccc attccgccgg ggacatcgtc gttgctgggt tggctttggc
     2101 acggatgttc acggacgaag ctcctcgttg ggaaaggacc gatgcgcggc gtcgtcttgt
     2161 ctcgccggca tggtagcgaa aggcgcctgc gcgttccagc gcagccggtg ctttagaatt
     2221 cccgcccgag aagaagatgg tcgagcgaaa tcgccccgcc gccgtggacg aggaaataca
     2281 acgccgccac ggtccacatc agcgtgtatt cgagaccggc cttgttccag aaatatccgc
     2341 ccacccgcca gcgctcgtag ttggacacga tgagaaaaat gaggatcggg caggccgcga
     2401 ggcgggtaaa caggcccagg gcgagcattg gaccggcgac gagctgggtg agcgagatcg
     2461 caggcgccca caatcgtccg ggacgatagc cgtcgcggtc gagctgtttc gccaactcgg
     2521 tcagattgtg cgactgcaca cccgtcgacg gaaaaaggcc gaacgtgttg cgtagcccgt
     2581 gcgggacgag cgcaagcccc accaccgcgc gcaacagcgc ctcggcccag ggggcaagcg
     2641 attggtagag ggactccaag gagccgcgcc cctaaagcct gatctcgccg agattgatgc
     2701 tcgcccccag aaccgcctcg accgacgtcg cgccgcggcc cgttgccgat atctcgacgc
     2761 gatagctgcc agagccctcc tcgagcttgt cgaatttgaa atcgccgtaa ttgtcgctcg
     2821 tcgtctccgc aaccgttcgg ccgtccttga ccagccgaac actcgcgccc tcgacgcaat
     2881 cgatgacgcc gttcctctcc gccgatagcg tgccgccgat gaagcatttc gagtaacgcc
     2941 agaggttgcg gtagtagacg cgggggcgcg tgcccaattc cggtttcatc acttcgaggc
     3001 cctgatcgcg cgccatgcgc gccatttcct cgtcctccag cttgatcgcc cgcatggcgc
     3061 cggtcgggca cgattgctgg ccgcgagttt gttgccagcc ctggtccaag aggtgggcgt
     3121 cgaacggcca tatctgcgga agctgcaact cctcattcca ccagatgtgc ccgtagggac
     3181 aggcttcgac caggtccttg cgtcccctcg ccttctccgg gtcgatgaga acgatcccat
     3241 cctcgcgttt cttcaccgca tcgccggcct tggctatgca cggagcatgg tcgcaatgat
     3301 tgcacatggt tggaacgtag gcgatgtcga tcatcggcac ctgccctcgc tccttctgca
     3361 ggatgttgat ccatttgtgg ccgtgcttcg gcatgggcgc gctgtagccg ggccaggcat
     3421 tgccgacata ttcatccatc acggccagtg tgcacagatt gcaattcgtg cactcggcca
     3481 cgtcgatgat catgttccat ttttgcatgg cacgcctcca ggcgactcgc gattggacgg
     3541 gcccgctccc tagccgccgt tcgcgattcg cttttcgttc ttcacttcgc cggcacgagc
     3601 tgcgccgcct tgagcgcctc gcggacctcc ttatccttct ccatgcgcgc gaaggtctcc
     3661 gacatgtgct cggtgcgccc gtcccacagt tcgacctcga ccagcgcgtt cgcgccggca
     3721 atcgaatggg tcgaggcggt ctgcgtgcgc tcgggcgtga gcaagttgag gcacccgccg
     3781 cgatcgaccg atttgcccgg ttcgcccatc gggtcgtaga tcgccgagga ttcgtagcca
     3841 tggcatacgg cgcgcggcag ccgctgggtc ggcagcgccg cgcagatcac cgcgccgcgg
     3901 tcgttaaaga ccttcaccag gtcgtgcttc ttgatgccgc gctcggcggc atcctccgcg
     3961 ttgagccgca tgatccagta gtaatagccg tcaacgttga cccgatggtc ctcgatgttg
     4021 agcaggaacg agtccttgcc gtcgccctgg gtgtggaacg agtacttcga atgcggcgtg
     4081 agcatctgta gcggatagcg ctcgaacatc tcgcccgaat gcggcccctc ccatgacggc
     4141 tcgtatttga cgatcggcgg ccgctcggga tcgttgaagc gcttgaggct gttgcactcg
     4201 aattcaagct tgccggactg agtctgcagc ccgcgcagat attcttcggc gtaatccgac
     4261 ggcagcggct gcgcctccgg aacgtccttc ttgcggttct cccagaacca acggaacgaa
     4321 accggcgcgc gcaacttctc cttctccgcc gggaccacgt agtacccgcg cttgacgaac
     4381 ttcttccacg agatgacctt gggcagatcg gacgcgagat acacgcgctt gacccaatcg
     4441 atctcgttga caccttcgga gaaataattg gcgagcccga gccgcttgca gatctcgttg
     4501 aagatccaga aatcggactt ggattcgccg agcggggcaa ttgccggcgc ctggaagatg
     4561 atgacgcggt gattgagttg ctgctggccg tggtggccgt aaccgccgag ccccgcccat
     4621 tcgctgatgt cgacccgttc gaaattggtg catgcgggca ggattacgtc ggcgaacttg
     4681 gcttcaccct cgaaccagat cgattgattg accacgaact cgagattggg cgactgatac
     4741 atccgcaccc agcggttggt gttgttcatg gtcgagagga tcgagccgcc gtatttgtac
     4801 atcattcgca ccggcgcatg gccgggcgcc ggataggaaa acttcgcaaa ctggtgctcg
     4861 atcgattttc ccacccaggg atagccttcc gccttgccgt cggcgatcgc ctccggcgtg
     4921 cgcaaccgcg ggatgcgttg aaacgtcgtc gacatgctcg gcaactgcgg catgcgctga
     4981 taaagctcga ccggcatggc agtgttttcg agatcgccgg acattccgcc gtcggcgtag
     5041 ccggggaaat agaactggaa atcgagcggg catccccact gcagattgcc catgttgacg
     5101 cccggcttgc ccaatccctg catcgcggtc aaacacacca tgacgcgcgc ccattggatg
     5161 ccggtctgat tgcggcaagc gccgccgtga ccgttgcccc agccgcctgg cgcgagatag
     5221 acgcgttttc tcccccattc gcgcgcgagc gcccgcacgt cctttgccgc cacgccggtc
     5281 tctttctcct gccactccgg cgtcttggcg atgccgtcct cctcgccgag gagataggcc
     5341 ttccacttgt cgaagcccac ggtgtggctg gcgacgtacg ccttgtcgta gaggtcctcc
     5401 ttgatccaga catgggcgat cgccattgcc atcgcgaccg aagtcgtagg tctgggtgcg
     5461 aaccacttgc ccggcaggaa ttgcgccgac gcgttgtagt aggggtcaac gtgcacgact
     5521 ttgatgccga gctttggatt cttgagccac tgccggcgca cggtgccttc ctgcgcgcca
     5581 taggagccgc tggtgctctc gggatcggcg gcccagaaca cgatcatgtc gcagttctgc
     5641 aggcagtcct cgaccgtgcc gtaggtttcc gactggccga cgcgcaaggt gtagccccaa
     5701 tggtgcaccg cgccccagta ccagccttcc cagctgtcag gattgtgatg gatctgcgtg
     5761 tatccgaccg cattgcggaa acgaaacagt gccgagaggt aatagccgat gttgccccag
     5821 gtatggtggg agccgtgcga caccgccatg acgccgggcc cgtaggcgcg cttgagccgt
     5881 ttgatctcgc cggcgacgag gtcgagcgcc tcctcccagg agatgcgcac gtaggctgac
     5941 ttgccgcggt tttgcggatt gcgctggccc ttcgggtcga agtcgacgcg cttcatcgga
     6001 taaagcaagc gatccggcga atagatgatg gacttcgcgt tctgcccatg cggggcgagc
     6061 gtggtcttgc gcggcggcgt gaaggtgagc ccgcgcgcgt cgatgctcca cggcggggga
     6121 tcgtcggcag cgagatcaat cggcgtcatg cggatgatct tgccgtcctt gacatagacg
     6181 aagaccggcc cgccgttggt catgttgcag tagcgcattg tgccgtcggc aagcagggtg
     6241 ccgatctcca acccgacgct ctggctcaac atgatggtct gcgcgaacca attgctgaga
     6301 tcctccggtc cctcgaccgt gagcttgaaa tccttctgcg cgttgatctg gtcaagccag
     6361 ttgatcggcg gcatgagcag atccgctccg accgcggcgg tcttgaaggc gagcgtgaca
     6421 tcggcgtcgg cgcgtagccc cccgcccgag gtgaccttgc cgtcgcggat cgcgtaccag
     6481 cggccgatct cctcgtcacg cgccttgagc tgcgcgacga gattgcgttc cttgagccgc
     6541 gcgcggaatg ccgggtgccg ccaggccacg taccagagaa gctgcgccat tccccacagg
     6601 atgatccgga acttcatcgc tgagagcatg gtctcctcct cgccggcttg cgccgaagat
     6661 gttcttgtga gcgctgatcg cgcgatattt tcggccgttt gcagcggggg cgcaatatct
     6721 aagaggcccg gcggccatcg cgctagtccg ccttgatgcc ggaaacctga accacgtgcg
     6781 cccatttctc gatatcggcg cgcagatatt tctcgaactc ggcgggactc atcaccagcg
     6841 gcaccgcgcc ttgcttgtcc caggcctcct tcacgtccgg gcgggtgatg gccttgttga
     6901 tctcggcatt gagcttgtcg acgatcgcct tcgtcgtgcc ggcgggcgcc atgatgccga
     6961 gccagatggt cgattcgtag ccgggcacgc ccgcctcggc gatggtggga acgtcgggca
     7021 gcaccgagga gcgcttggcg gccgacgtgc cgagcgcgcg cacctgcccg gccttcacgt
     7081 tcggcgtcat ggtggtgatg gcgtcgaacg ccatttgcac gtggccgccg atgacgctgt
     7141 tgcgcatttc cccggatgcc ttgtgcggga cgtgcaccag attcgtgccg ctcatcgctt
     7201 tgaacagctc gccggccatg tgatagggcg tgcctgcgcc ggaagaggcg taattgagct
     7261 cgccgggctt cgatttcgcg taggcgatga attccttgag gtcctttgcc ggaaccgaag
     7321 ggtggatcac catcaccaag tcggaatagt tgattcctgc caccggcacg aagtcgcgca
     7381 tcagctgaaa cggcttgtgg gctatgagcg actcgttggt cgtgtgggtg ttcgacatcg
     7441 cgagcaaggt gtagccatcg ggcggcgact tcgcgaccgc atcagtgccg atgatcgagc
     7501 cggcgcccgg ccggtcctcg acgacgaagg gctctttgag cgcctccgac aggtgctggg
     7561 caagaacgcg ggagtagacg tcggcgggcc cgccggcgcc gaacggcacg atgatcttga
     7621 ccggccgcgt cggataatcc tgggcgaggc aagctggaga ccacgaaatg ggcaaggcga
     7681 gcgccgcgac cactatggat gcgcgcatgg cagcgccagc ggcagacgca acgacgcgcg
     7741 gcgacggaat cattctaaag cctcccggac cattcttggt gacgacttaa cgaccataga
     7801 caagcgttcc tgcgggctca acgaggcact tcgccgccga tgcgcttgag ccccgtccta
     7861 ggctggcgcg cacactgcac gcacgcgggc tccaagcctc tatgcacctt tcgccgcgcg
     7921 cgataagctc gtccagcgac tcgtcagcgc attgcattcc atcgaggccc gatcgagggc
     7981 caaatggagg aaagccggtc gcaaaacttc aaagacgtag cgagggggaa accatgtcca
     8041 ttggatcaac cgaatcgtca catccatcgc tgtcccacgc cgacagcctt gccgccagca
     8101 ccgcggacac tttcttgctg gtcggccgcg tcctgctcgg ctggctcttt ctcgcgagct
     8161 cggcgggcat cgggggaaag ctgtggaacc acgccggctt tcttggctac ttgaagaatc
     8221 tgggcgcgcc cgcgcccgag gtctcgtcct gggttggcgc tgtcgtcgaa ttcctgatcg
     8281 gcgctgctct cgtgctcggg gtgggcaccc gatatgccgc gctgctctgt gcattattcc
     8341 tcatcgctgc aaccgcgctg gcccatcgct attgggaata tccagccgcg cagatgggaa
     8401 accaatacaa tcacttcctc aagaatgttg ccgtcttcgg cggcgcgctc atcctgttcg
     8461 tggccgggcc aggccgcttc agcatcgatc ggatgctgtc gaagagaggt tgagcggcgc
     8521 cagagcgcta ctatgaagaa acccagcctt cgcccatcgc caagatgaag gcggagagag
     8581 gaaacccgtc gaggggtcgc aacgtggctg aagcaatatc gcgccattac attcccgcgc
     8641 tcggtagcat ttacggcgcg gtggagaggt atgccgaacc gatcttgcgc ataacgctcg
     8701 gcgggattct catcccgcat ggcatgcaaa agctgttcgg agcgttcggc ggcatgggct
     8761 ttgcgggcaa tgccacgttg ttcgatcgca tcggcttcac gcccggcata ttctggggca
     8821 cgctggtcgg atgcaccgaa ctgatcggcg ggatcctgtt ggtgctgggg ctgctcaccc
     8881 gatttgcggc cgcagccgtt ctcatcttca tgatcgtggc cgtgaagttc acgtcggcca
     8941 agggcttttt ctggagccaa ggcggttggg aatatccgct gctcatcggc gtgtgcgcgc
     9001 tgttcttcct catgcgcggc ggcggtacct gctcgctcga ccgcgcaatc gggcgcgagc
     9061 tttaagcagc gacgccaggc acagccgcca tcagccccgg aacatgcctc atggccacag
     9121 cgccttgctc gcaaggcgag cgccttgcgc caaggcttcg agcttcgccc acatgatcga
     9181 ggagtggacg cggcggtaga acggtccctg tgcgaagccg caatccgttc ccgccagcac
     9241 attctcgcgc ccgacaagct ccgcgtaacg tacgatgcgc tcggcgacga gttccgggtg
     9301 ttccaccaca ttcgtggcgt ggctgatgac cccggggatg agcgccttgc cctccggcag
     9361 cttcacctcc tcccagacct tccattcatg ggcgtgacgg ggattggcgc cttcgatcac
     9421 ataagccccg accttcacct tgaggatgag gtcgacgatg tctttgagcg gcacgtcggt
     9481 ggtgtgcggc cccggccagc ttccccagca gacgtggtag cggatgcgct cgggcggcag
     9541 gccctcgatc gcgtggttga gcacctcgac gtgcatggcg acccattcgc ggtactcggc
     9601 gaagctcgcc ggcggcacca tgcgatcgta tgtcaccgcg gtgcgtgcgt cgtcgagctg
     9661 cagcaagaag ccggaatcga cgatcatctt gtattcggtc cgcatcgccg cggcgatcgc
     9721 ggcaaggcac tcctcgtcgc tgcggtaata ctcgttcttg cgatccggga tgacgctcgc
     9781 cggcgaagca accggcagga acgcctcctc gactccgacg ccgtcgagcg cagccttgaa
     9841 gttcttgatg tcgcgctcga gctctgcctg tccggtatac gcgatcggcc cgatgcaaat
     9901 cgcctcggtg gtggtcgcaa tctcttcgcg cgcgtcgagc tcggcataga attcgccaaa
     9961 acgtcgccga tcggcgccgc gctgaaacgg gttggcgccc tgcttgaccg ggcggcgttc
    10021 gaagccgctc aggcgttcga gcgcgtattg cgaccagctg atcgattttc cgaattcgcc
    10081 gtcgctgacc acgtcgatac cggcctcggc ttggcggcga acaatggcgg cgaccgcctc
    10141 cgtcaggcac gcggcatagc cattcgcgtc gaatgctttg ccgccctgct tggcgcgcag
    10201 gaacgcctgc agcggctgcg gccggatcag gctgcccaca tgtgtggtga ggatgcggtc
    10261 gatgctgcgt ttcatcttcg ccggctcgcg ttcggtggtg cttctagcag aggccggtat
    10321 tcgcggccaa tcgcgctggc gccggcttct tgcccgcaac gagctttggg cacgttatca
    10381 ttcaatgaca agggcgcgcg gatggctgtg acataggctt tgccggctac gtcataggaa
    10441 actatgctgg accagcaagg acggtgaacg ggaggagcaa atggcgcctg acctatcgcg
    10501 ttgcatcctt ggcgcgagtt tcgcgttcgt cctgatcgtg caaggccaag cggctgagct
    10561 caatccggcg gcgctcgtct atcagctgcc cgaccagatc aagtggaacc cgccgagcgc
    10621 cgagggcgtg caaaacgcgg tgctcgtggg cgacccgtcg aaacccgggc tttacctcca
    10681 gcgcaccaag tggctgcaag gaaaccattt cagccgtccg cacttccacc ccaacgaccg
    10741 cttcatcacc gtactctccg gcacttggtg gatgggcagc gggacgaatt tcgatcccga
    10801 caacgccgtg gcgttgccgc ccggcacgtt cgtgacgcac ttcggcaaac aagtgcattg
    10861 ggacggcgcc aaaaccgaag acgcctcgct cctgatcttc ggcgagggac cgggaaccag
    10921 cactcgggtc gagacgaccg cgggcaaatt ctccggcctc gatcccaagg ccgtcgtcta
    10981 caccttgccg gatcaataca aatggcgcga cccgaccggc gcggccggcg tcaaccaagt
    11041 cgtgctgcac ggcgatccgt cccagagcgg accctatgtg gttctcaacc gcttcaagcc
    11101 gggcaatttc agcaagccgc acttccatcc caacgaccgc ttcataacgg tgatcaaagg
    11161 cacctggtgg gtcgcaaccg gaaacaagtt cgacaaagag aatacggtcc ccatgccggc
    11221 cggcagtttc gtcacccatt tcgccaagca ggtgcactgg gacggggcca aagacgagga
    11281 aacctggctg ctcatcgtcg gcgagggacc ggcgacactc acgttggtcg acgtggcgaa
    11341 ctagccggtg ccgtcgagat cgcaaccatg cgcgtcagcg aagacatcgt cgcagcaatc
    11401 ggcaacacgc cgctgatcaa gctcgagcgc gcgtcggcgg ccaccggttg caccatcctc
    11461 ggcaaggccg agttcatgaa cccgggacaa tcggtcaagg accggccggc gcgacaaatc
    11521 atcctggaag cggagaagcg cggcgagatc aggccagggg ggctgattgt cgaagccacg
    11581 gccggcaaca ccggcatcgg gctggcgctc gtcgccaatg cgcgaggcta ccgcacactt
    11641 atcgtcattc ccaataccca gagccaggaa aagaaggaca tgttgcgcct gtgcggcgcc
    11701 gaactcgtcg aggtgccggc tgcaccctat
//
LOCUS       DATCWM010000013         3572 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_432046, whole genome shotgun sequence.
ACCESSION   DATCWM010000013 DATCWM010000000
VERSION     DATCWM010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3572
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_432046"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2461
                     /gene="bamA"
                     /locus_tag="VIQ50_00250"
     CDS             <1..2461
                     /gene="bamA"
                     /locus_tag="VIQ50_00250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HEY9358833.1"
                     /translation="TARVAYAQAPSVSSIIVQGNQRVEADTIRSYFRPGPGGQLDAFQ
                     IDEGVKALISTGLFQDVRPTIQGGRLIITVIENAVINRIAFEGNKKVKDEQLKSEIQS
                     KERGTLSRPIVQADTARIVEVYRRSGRFDVQVEPKIIELPNNRVDLVFEINEGVKTGV
                     KLIQFIGNFAYSSYRLKDVIKTSETGLLLAFLQTGDIYDPDRIEADRELLRRFYLKHG
                     FIDVRIVSAVAEYDPDRRGFVITFTIEEGEQFRVGSVDVQSTIRALDDPGLLRVKLRA
                     YPGDVYNAEAVEKTVEDMTIEASRQGFAFATVRPSATRDAATRTVNLIFTVTEGQRVY
                     IERINVRGNTRTRDYVIRREFDLAEGDAYNRALVNRAERRLKNLSFFKSVKINTEPGS
                     ASDRVVLNVDVEEQATGEFSVSGGYSTADGFIGEVSVAERNLLGRGLYGKIGVQYGQY
                     TKGATLSYVDPYFLGYRVAMGIDLFYKQQLPTSYVSYETETYGGGTRLGFALREDLSL
                     QLRYSIYQQKITLTPQLANCNNINPDFVNTFPTPDKIGTTPALTPPGGFGGIANCYVD
                     GEASLAVKSAVANGPVLTSLVGYTLTHNTLDNNRNPTSGLLAELRQDFAGVGGDVRFF
                     RTTGDLYSYREVFSDIVGLVHLQGGQVAGIGGDLRMLDHFQMGPNLVRGFAPAGIGPR
                     DLTQFPFTGILGDALGGTYYWGASLEVQTPLYFLPKDAGIKVAAFADAGSLWNYTGPT
                     VFPATGEVISGNFCPTFGPGIPNSTPCAIDNAMHVRSSVGIGLIWESPFGPLRFDYAF
                     PLSKEPYDRIQQFRFGGGTKF"
     gene            2495..>3572
                     /gene="lpxD"
                     /locus_tag="VIQ50_00255"
     CDS             2495..>3572
                     /gene="lpxD"
                     /locus_tag="VIQ50_00255"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018262668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HEY9358834.1"
                     /translation="MTEPFFFSRGRGLSVREIAALASAKPRPGADLDRRITGIAALDQ
                     AAPSDLAFLDKAKYAPQLSTSAAGACLTTERYAGRAPAQVSVLCVAEPYRAFVEVARG
                     LFPEALRPSSLFEAGGGIAVGSFVHPSARMETGVTVDPGAVIGPRAEIGTGTVINSGA
                     AIGPNVRIGRHCAIGANASITNSLIGDRVIVHAGCAIGQDGFGYLMGATGHRKVLQIG
                     RVIIQDDVEIGAGTTIDRGGIRDTVIGEGTKIDNLVQIGHNVTIGRHCIIVSQCGISG
                     SVVIEDRVILAGQVGLADNVRIGEGAIIGARSGVMSDVPAGEKWFGYPAMRGREFLRS
                     MMTLRHWVSKSDAPESGDDEDAPDD"
BASE COUNT          668 a         1129 c         1107 g          668 t
ORIGIN      
        1 cacggcgcgc gttgcctatg cgcaagcgcc tagcgtcagc tcgatcatcg tgcaaggcaa
       61 ccagcgagtc gaggccgata ccatccgctc ctatttccgg ccgggaccag gcggccaact
      121 ggacgccttc caaatcgacg aaggcgtgaa ggccctcatt tccaccggtc tgttccaaga
      181 cgtccggccg acgattcaag gcggacgctt gatcatcacc gtgatcgaaa atgcggtgat
      241 caaccgcatt gcgtttgagg gcaacaagaa ggttaaggat gaacagctga aaagcgaaat
      301 ccagtccaag gagcgcggga cgctgtctcg tcctattgtg caggccgaca cggcgcgcat
      361 cgtcgaggtc taccgccgca gcggccgttt cgacgtgcag gtcgagccca agatcatcga
      421 gctcccgaac aaccgcgtcg atctcgtctt tgagatcaac gaaggcgtaa agaccggggt
      481 caagctgatc caatttatcg gcaatttcgc ctattcgtcc taccggctca aggacgtgat
      541 caagacctcc gagaccggac tgttgctggc cttcctgcag accggcgaca tttatgatcc
      601 ggaccggatc gaggccgatc gcgagctgtt gcgtcggttc tatctcaagc acggcttcat
      661 cgacgtacgc atcgtctcag cggttgcgga atacgatccg gaccgcaggg gtttcgtgat
      721 taccttcacc atcgaagaag gcgagcagtt tcgcgtcggg tcggtcgacg tccagtccac
      781 gattcgcgcg ctcgacgacc ccgggttgct gcgggtgaag ctgcgagcct atcccggcga
      841 cgtctacaat gccgaggcgg tggaaaagac cgtcgaggac atgaccatcg aagcctcgag
      901 gcaggggttc gccttcgcga cggtgcgccc aagcgcgacg cgcgatgctg ccacccgaac
      961 cgtcaatctc atcttcacgg tcacggaggg tcagcgcgtc tatatcgagc ggatcaacgt
     1021 ccgcggcaat acccgcaccc gcgattacgt gatccggcgc gagttcgacc tggcggaagg
     1081 ggatgcctac aatcgcgcgc tcgtcaatcg ggccgagcgg cgcctgaaga acctcagctt
     1141 tttcaaatcc gtgaagataa acaccgaacc gggctcggcg tccgatcggg tcgttctcaa
     1201 tgtcgatgtc gaggaacagg cgaccggcga attctcggtc tccggcggtt attcgaccgc
     1261 ggacggattc atcggcgagg tcagcgtcgc ggaacgcaac ctgcttggcc gcggactcta
     1321 tggaaagatc ggcgtgcaat acggccaata caccaagggt gccacgcttt cctatgtcga
     1381 cccttacttc ctcggctatc gcgtcgccat gggcatcgac ctgttctata agcagcagct
     1441 gccgacgagc tatgtctcgt acgagacgga aacgtacggc ggcggcacca ggctcgggtt
     1501 cgcgctgcgc gaggatctct ctctgcagct gcgctattcg atttatcagc agaagatcac
     1561 gctgacgccg caattggcga actgtaacaa catcaatccg gatttcgtga acaccttccc
     1621 gaccccggac aagatcggca cgacgccggc ccttaccccg ccgggcggat ttggcgggat
     1681 cgcgaactgc tatgtggacg gcgaggcctc gcttgcggtg aaaagcgctg tggcgaacgg
     1741 cccggttctc acctcgctcg tcggttacac gctcacgcac aacactctcg acaacaacag
     1801 aaacccgacg tcgggcctgc tggcggagct caggcaggat ttcgccggcg tcggcggcga
     1861 tgtgaggttc ttccgcacca ccggcgacct ctacagctac cgcgaggtgt tctccgatat
     1921 cgtcggcctc gtgcatctgc aagggggcca ggtcgccggg atcggtggag acctgcgcat
     1981 gctcgaccat ttccagatgg gccccaattt ggtgcgcggt ttcgcgccgg ccggaattgg
     2041 tccacgcgac ctgacgcaat ttccattcac cggcattctg ggggatgcgc tcggcggcac
     2101 gtactactgg ggcgccagtc tcgaggtgca gacgccgctt tatttccttc ccaaggatgc
     2161 gggcatcaag gtcgccgctt tcgctgatgc cggctcgctc tggaattata ccggcccgac
     2221 ggtcttccct gcgaccggcg aagtcatctc cgggaatttc tgtccgacct ttggtccggg
     2281 catcccgaat tcgacgccgt gtgcaatcga caatgcgatg catgttcgta gctcggtcgg
     2341 gatcggcctc atttgggaat cgccgttcgg gccgctgcgg ttcgactatg cattcccact
     2401 ctcgaaggag ccgtacgacc gcatccagca gttccgtttc ggcggcggca cgaaattctg
     2461 atccccgcct gcggacgcgg cgagtggcac cggcatgact gagcccttct tcttcagtcg
     2521 gggacgaggg ctcagcgtgc gcgagatcgc cgccctcgcc agcgccaaac cgcggccggg
     2581 cgccgatctc gaccgccgca tcaccgggat tgcagcgctc gatcaggccg cccccagcga
     2641 tctcgcgttt ctcgacaagg caaagtatgc gccgcaattg tcgaccagcg ctgccggcgc
     2701 ttgcctgaca acggagcgat atgcgggtcg cgcccccgca caggtcagcg tgctctgcgt
     2761 cgccgagccg tatcgcgctt tcgtcgaggt cgcgcgcggg ctctttcccg aggccttgcg
     2821 cccgtcctcc ctgttcgagg ccggaggggg gatcgcggtc ggttctttcg tccatcccag
     2881 cgcacgcatg gaaaccggcg tgaccgtgga tcccggcgcc gtgattggcc cgcgcgccga
     2941 aatcggaacg ggcaccgtga tcaactccgg cgccgcgatc ggaccgaacg tgcgcatcgg
     3001 ccgccactgc gcgatcggcg ccaacgcctc catcacgaac agcttgatcg gcgaccgcgt
     3061 gatcgtccat gcgggttgcg ccatcggcca ggatggattc ggctacttga tgggagcgac
     3121 cggtcaccgc aaggtgctgc agatcggccg cgtcatcatt caggacgatg tggagatcgg
     3181 cgccggcacc acgatcgacc gcggcggcat ccgcgacacc gtcatcggcg aaggcaccaa
     3241 gatcgacaac ctggtgcaga tcggacacaa tgtgacgatc ggccgccatt gcatcatcgt
     3301 ctcgcagtgc ggcatctccg gcagcgtcgt tattgaggat cgcgtcatct tggccggaca
     3361 ggttgggctc gcggacaatg tgcggatcgg cgagggcgca attatcggag cgaggagcgg
     3421 cgtgatgtcc gatgtgccgg cgggcgaaaa atggtttggc tatcccgcca tgcgcggccg
     3481 cgagtttctt cgcagcatga tgacgttgcg ccattgggtg agcaaaagcg atgcacccga
     3541 gagcggcgat gacgaggacg cgcctgacga cg
//
LOCUS       DATCWM010000014         2707 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_280900, whole genome shotgun sequence.
ACCESSION   DATCWM010000014 DATCWM010000000
VERSION     DATCWM010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2707
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_280900"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(117..1709)
                     /locus_tag="VIQ50_00260"
     CDS             complement(117..1709)
                     /locus_tag="VIQ50_00260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HEY9358835.1"
                     /translation="MVTTPSDPLPADLAAAHAMILAQREQLTLAKSEVTVGRLEIERL
                     KLMLAKARREQFGQSSERGKLLVEQLELAIEDLEVTQAEQEAKAEIAAPQATPEKRAQ
                     NPRPPRRPLPDNLPVERIVELAPCACGKCGSVRLHKLGEVVSKTLECEPRRWKIIERV
                     REKFSCRDCEAITEAPAPSHPIPRGFAGPSLLAMVLVNKFLLHQPLNRQSNTYAREGI
                     EIDVSTLADRVGACVVALEPLIEAIRTHVMRAERIHADDTTVPVLAKMKAVVGRIWTY
                     VRDDRPFAGTDPPAALFYYSRNRAGEHPQGHLAGYVGLMQADAFNGYNDLYRANRKPA
                     PILEAACWSHGRRKFFDLAKSGEAPIATEAVRRIDELFEIERAVNRQTPEQRLAARRE
                     KSRPLVVNLEIWMRQQRALLSSSNDTAKAINYLLNRWAAFTRFLDDGRVCLSNNAAER
                     ALRGVAVGRKNWTFAGSDAGGHRAAAVYTLVETCKMNDVDPQAWLADVLARLPDYPAN
                     QVADLLPWNWKANQQSKAAVAA"
     gene            complement(1777..2124)
                     /gene="tnpB"
                     /locus_tag="VIQ50_00265"
     CDS             complement(1777..2124)
                     /gene="tnpB"
                     /locus_tag="VIQ50_00265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017183759.1"
                     /note="TnpB, as the term is used for proteins encoded by
                     IS66 family insertion elements, is considered an accessory
                     protein, since TnpC, encoded by a neighboring gene, is a
                     DDE family transposase; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HEY9358836.1"
                     /translation="MIAIPGNVRVWLATGHTDMRRGFPSLARLVQESLKRDPHAGDLY
                     VFRGRRGDLIKIIWHDGQGACLFTKRLERGRFLWPSLADGVVTISVAQLSYLLSGIDW
                     RMPQATWRPQASG"
     gene            complement(2121..2522)
                     /locus_tag="VIQ50_00270"
     CDS             complement(2121..2522)
                     /locus_tag="VIQ50_00270"
                     /inference="COORDINATES: protein motif:HMM:NF013677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEY9358837.1"
                     /translation="MRVEVLDGLERRRRWSQDDKARIVEETLVPGAKVTDVARRNGVA
                     ASVVFTWRRQARTVEKVGPCFTPVQITAAVEPSAEDAKPLSKDDRRLRPVPAARNGLI
                     EIDLGNRRRVLVDAQVDAAALARVLDVLERR"
BASE COUNT          507 a          878 c          819 g          503 t
ORIGIN      
        1 gaggaagctt acgcgaccgg gctcgttcgc gatgcagtcg ccctcggtgt caaggatatc
       61 aaacgtacgc acccggccag caccccaggt aggcgcgatt ttccgctgag gatcgctcaa
      121 gcagcaacgg cggccttgga ctgttgattc gccttccaat tccagggcag caggtcggcg
      181 acttggttgg caggatagtc ggggagccgg gccagcacgt ctgcaagcca ggcttgcggg
      241 tcgacatcgt tcatcttgca ggtttccacg agggtgtaga cggcggcggc gcgatggccg
      301 cccgcatcgg aaccggcgaa ggtccaattc tttcttccga ccgccacacc gcgtaaggct
      361 cgttccgccg cattgttcga cagacaaaca cgaccgtcgt cgaggaagcg ggtgaacgcc
      421 gcccagcggt tgaggagata gttgatcgcc ttcgcagtgt cgttgcttga tgagagcaag
      481 gcgcgctgct ggcgcatcca gatttcgaga ttgacgacga gcggtctcga tttctcacgg
      541 cgtgcggcaa gccgttgctc cggcgtttgt ctgttgactg cgcgctcgat ctcaaacagt
      601 tcatcgatgc gccgcaccgc ctcggtcgca atcggggcct ctcccgattt cgccaggtcg
      661 aagaactttc tgcggccgtg gctccagcac gctgcctcaa ggatcggcgc tggcttccga
      721 ttggctctgt agagatcgtt gtagccgttg aaggcatcgg cctgcatcag accaacgtag
      781 ccagcaagat gaccctgcgg atgctctcca gcccgattgc gggagtaata gaacaatgct
      841 gccggcggat cggtgccggc aaatggccgg tcatcgcgaa catacgtcca gatccggccg
      901 accacggcct tcattttcgc cagcacaggg accgtggtgt cgtcggcatg aatgcgttct
      961 gcgcgcatga catgggtccg gatggcctca ataagaggct caagcgccac cacgcaggcg
     1021 ccgacccgat ccgccagcgt cgagacatcg atctcgatgc cctcgcgggc ataggtgttg
     1081 ctctgacggt tcagcggctg gtgcagcagg aatttgttga ccagaaccat cgccagcagg
     1141 cttggcccgg caaaaccgcg cgggatcgga tgcgagggcg ccggcgcctc ggtgatcgcc
     1201 tcgcaatccc ggcaggagaa tttctcgcgc acgcgctcga tgatcttcca gcgtcgcggc
     1261 tcgcattcca gggtttttga gacgacctcg ccgagcttgt gcagccgcac actgccgcac
     1321 ttgccgcacg cgcaaggcgc aagttcgacg atccgttcga ccggcaggtt gtccggcagc
     1381 ggacgtcgag gcggccgcgg attttgcgct cgcttctctg gggtggcctg cggcgcggcg
     1441 atctcggcct tggcttcctg ttcggcctgc gtcacttcga gatcttcgat agccagctcg
     1501 agttgctcga ccagcagctt gccgcgttcg gaggattgcc cgaactgctc gcgccgtgcc
     1561 ttggccagca tcagcttcag ccgctcgatt tccagccggc cgacggtgac ttcgctcttc
     1621 gccagtgtca gctgctcgcg ctgcgccagg atcatcgcat gcgcggcggc aaggtcggcg
     1681 ggaagcggat cggagggcgt cgtcacgatg acgaatcaac catattcgcc gcaaaaaatc
     1741 gcgccagatt tccgctgtga gtcaaaaagc cacggcttaa ccggaagcct gtggacgcca
     1801 tgttgcctgc ggcatccgcc agtcaattcc ggacaaaaga taggacaatt gcgcaacgct
     1861 gatggtgaca acaccgtccg ccagcgatgg ccacaggaac cgtccgcgct ccagcctttt
     1921 cgtgaacagg cacgcgccct ggccatcatg ccaaatgatt ttgatgagat caccgcgacg
     1981 gcccctaaaa acgtagagat cgccagcgtg gggatcgcgc ttcaagcttt cctgaacgag
     2041 ccgcgccagg cttgggaagc cacgtcgcat atcggtatgg ccggtcgcaa gccacacccg
     2101 cacattgccg ggtatcgcaa tcaccgccgc tccagcacat ccagaacccg cgccaacgct
     2161 gccgcatcca cttgcgcatc caccaagacg cgccgccggt tgccaaggtc gatctcgatc
     2221 agtccgttcc gggccgccgg cacgggccgc aaccgtcggt catccttgga tagcggcttc
     2281 gcatcttccg cgctcggttc caccgccgcg gtgatctgca ccggcgtaaa acatggcccg
     2341 accttctcga ctgtccgggc ctggcggcgc caggtgaaca cgacgctggc cgcgacaccg
     2401 ttgcggcgcg caacatctgt caccttggcg cccggtacca gcgtttcctc gacgatccga
     2461 gccttgtcgt cctgcgacca gcgccgccgc cgctccaacc cgtccaacac ctcgacccgc
     2521 atcgcctgat gaccttaaag ctagacttaa ggtcacacgc ttcgcggaat aacccgcgtc
     2581 agacaagacg gtgctcgtcg gaaccgtaca acgaaacttg aacagatagc agtgaaagct
     2641 gtgaaccaac tgccgaacag cgtggtgcgg gaaatccgca cgccacgttg tgtgggagcc
     2701 gggggcg
//
LOCUS       DATCWM010000015         7114 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_388838, whole genome shotgun sequence.
ACCESSION   DATCWM010000015 DATCWM010000000
VERSION     DATCWM010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7114
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_388838"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(29..481)
                     /locus_tag="VIQ50_00275"
     CDS             complement(29..481)
                     /locus_tag="VIQ50_00275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010661796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromate resistance protein ChrB
                     domain-containing protein"
                     /protein_id="HEY9358838.1"
                     /translation="MKWVTRANVKVDRVACPWLIRTFIDRDAEFLFVPVGEIESVSRT
                     TGAIPYDVADVELGHHGEECSFDAIVKKYKVEDKAVGRLALIVRGADTPRRDLTPESR
                     GLEAIAEGFKRLAAAQGYDDQETLRRERHLYDALYLYCGGDAEKLRRD"
     gene            complement(508..1590)
                     /locus_tag="VIQ50_00280"
     CDS             complement(508..1590)
                     /locus_tag="VIQ50_00280"
                     /inference="COORDINATES: protein motif:HMM:NF017722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004062 - aryl sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aryl-sulfate sulfotransferase"
                     /protein_id="HEY9358839.1"
                     /translation="MTIRRRGVGLRGYDPERAFAGFTLFSPLSSSNKTVYLVDMLGNV
                     VHTWTMPYPPGQSGYLTERGTLFYNGQIPNESHVGQAPYRGGAALEMDWKGRILWEVN
                     HPDHNHDGIRLKNGNVLLICQKPLPVDLVPKVRGGRPGSEYDDGKMDAPYLVEMTISG
                     QIVWEWLSWEHLDPGQDMITADQDDRDVWTVANGVSEMPDGNLLVSFRDISTVVMINR
                     RTGAIYWKLGAPPLAGQHAPHILSNGNLLLFDNGPHRLDHSFPFSRVLEIDPATKAIV
                     WKYQEARVSDFFSPRISNAQRLPNGNTFINEGWFGRFFEVTRDGAVVWEYVNPYFGRR
                     QQLMINAVQRAYRYSAADIARAQSAA"
     gene            1905..2171
                     /locus_tag="VIQ50_00285"
     CDS             1905..2171
                     /locus_tag="VIQ50_00285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9358840.1"
                     /translation="MLRIIGFTPRLIPAIHGGRRLSPPARPPFAILRMFCEALREGLA
                     AHRHYEELRSKGLAHESALRHALAPAPSRSGCEALTPLWFAGKA"
     gene            complement(2258..3202)
                     /locus_tag="VIQ50_00290"
     CDS             complement(2258..3202)
                     /locus_tag="VIQ50_00290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GcvA"
                     /protein_id="HEY9358841.1"
                     /translation="MPRRLPPLNALKAFEAAARHESFTRAAEELCVTQGAVSHQVKAL
                     EAELGLKLFNRERQRLVITEAGRAYLVVVRDAFDRIGDGTERLLQRQSGGALTVSTSP
                     NFAAKWLVHRLGRFAEAHPEIDLRVSASLHHVDFAREDIDLAIRHGDGTPAGLHVTRL
                     CTEELFPVCSPKLLAGRNRPRTPGDLARFPLLHVSDRQGWRQWLDFAGVTAVDPSRGP
                     ILNQASMAIDAAVDGQGVALARTALAAWDLIGGRLIRPFDIAMPVSYAYWIVCSKAVA
                     KLPKIVAFSEWLQAEAAEDRRQLDRLMSKPRHAARARR"
     gene            3313..4005
                     /locus_tag="VIQ50_00295"
     CDS             3313..4005
                     /locus_tag="VIQ50_00295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEY9358842.1"
                     /translation="MTEVFVLGFPRSTYVHIVRLILTHKGVSYTFRDLEPEMGSVSHL
                     ALHPFDRVPILQQGDFTLYETSAIATYVDEAFEGPAVQPKDVRARARMNQWISSVNSY
                     YYPYMIYHVTHERLVYPQLGIASDEKVVAHALPKVQRALDVLEKALGHGADYILGSEL
                     TLADFFMLPSTYAFGLTEEGKAMYPKYPLFCGWRARMEALPAVKRFRAALPPRDPIEH
                     ARKWAVSHRPKY"
     gene            4093..5224
                     /gene="prfB"
                     /locus_tag="VIQ50_00300"
     CDS             join(4093..4161,4163..5224)
                     /gene="prfB"
                     /locus_tag="VIQ50_00300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502756.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HEY9358843.1"
                     /translation="MRAEVQTIVDEIKQSIGLLRRHLDVDKARTRLSELNKQAEDPAL
                     WDDQQRAQRVMQERTALEDQLTALGRIEQELDDQLTMIELGEAEKDQKAVAEAEAALQ
                     KLKAEVTRRELEALLSGEADANDTYVEVHAGAGGTESQDWASMLLRMYTRWAEQHGYK
                     IEWLEETEGEAAGIKSATVQVKGHNAFGWLKTENGVHRLVRISPFDANARRHTSFASV
                     NIYPVVDDRITVDIKEADVRVDTMRAGGAGGQHVNKTESAVRLTHIPTNIAVVCQNDR
                     SQHRNRAQAWQMLRARLYQRELKRREEKAAAEQAAKTDIGWGHQIRSYVLQPYQMVKD
                     LRTGVQTSNTGAVLDGDLDQFMEAALAQKAFGTAPKEVEDVD"
     gene            complement(5520..5888)
                     /locus_tag="VIQ50_00305"
                     /pseudo
     CDS             complement(5520..5888)
                     /locus_tag="VIQ50_00305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004430811.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2778 domain-containing protein"
     gene            complement(6656..>7114)
                     /locus_tag="VIQ50_00310"
     CDS             complement(6656..>7114)
                     /locus_tag="VIQ50_00310"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEY9358844.1"
                     /translation="ARAQITRLTRTLGSIPVRKPIDSELDLQSGFGVRTDPFLGTPAL
                     HTGLDLHGETGDPVRATGDGTVIAAGWNGGYGRTVDIDHHNGVSTRYAHLSSIDVRVG
                     QSVKSGQILGKLGSTGRSTGPHLHYETRLKGEAVDPQKFLRAGTRLAGAL"
BASE COUNT         1377 a         2237 c         2224 g         1276 t
ORIGIN      
        1 gcaagcaccg agcgcaaccg cgattgcgtc aatcccgccg cagcttctcg gcgtcgccgc
       61 cgcaatagag ataaagcgcg tcgtaaagat gccgctcgcg gcggagggtt tcctggtcgt
      121 cgtagccttg ggcggcggcg agccgcttga acccttccgc gatcgcctca aggccccgtg
      181 actccggcgt gagatcgcgc cgcggcgtgt cggcgccgcg cacgatcaac gccaggcggc
      241 cgacagcctt gtcctcgacc ttatatttct tgacgatcgc atcgaatgaa cattcctcgc
      301 cgtgatgacc gagttctacg tcggcaacgt cgtacgggat ggcgccggtt gtgcgtgaca
      361 cgctctcgat ctcgccaacc ggaacgaaca ggaactccgc atcgcgatcg atgaacgtgc
      421 gaatgagcca aggacaggca acgcgatcga ctttcacatt ggcgcgtgta acccacttca
      481 tcgatgcctc cgagcgggct gaactgatca agccgcggat tgcgcccgag caatgtccgc
      541 ggcggaatag cggtaggcac gctgtacggc attgatcatg agctgctgcc gccggccaaa
      601 gtagggatta acgtactccc acacgacagc gccgtcgcgg gtgacctcga aaaatcggcc
      661 gaaccaaccc tcgttgatga aggtattccc gtttggcaag cgctgcgcgt tggaaatcct
      721 cgggctgaag aaatccgaga cgcgcgcctc ctgatatttc cacacgatcg ctttcgtcgc
      781 cggatcgatt tcgagtacgc gcgagaatgg aaacgagtgg tccaaccgat gcggcccgtt
      841 atcgaatagc agcaggtttc cgttggacag gatgtgcggc gcgtgttggc ccgcaagagg
      901 aggcgcgccg agcttccagt agatggcacc ggttcggcgg ttgatcatca cgacggtgga
      961 aatatcgcgg aaactcacaa gcaagtttcc gtcgggcatc tcggagacgc cattcgcgac
     1021 ggtccacacg tcgcgatcat cctggtcggc cgtgatcatg tcttgtccgg gatccaagtg
     1081 ctcccagctc agccattccc atacgatttg cccgctgatc gtcatctcga cgaggtaggg
     1141 cgcatccatc tttccatcgt cgtactccga gcccggccgg ccaccgcgca ccttgggaac
     1201 gaggtcgacc ggaagcggtt tttggcagat caaaaggaca ttgccatttt tcagccgaat
     1261 gccgtcgtgg ttgtgatcgg gatggtttac ttcccataag atccggcctt tccaatccat
     1321 ttccagcgcg gcgcccccgc gatagggagc ctgcccaacg tggctctcgt tcggaatctg
     1381 gccgttgtag aagagcgtgc cgcgctcggt gagatatccc gattgaccgg gtgggtacgg
     1441 catcgtccac gtatggacca cgttcccgag catgtcgacg agatagactg tcttgttgct
     1501 ggacgatagc ggactgaaca gcgtgaagcc cgcgaaggcg cgctcgggat cgtagccgcg
     1561 caacccgaca ccgcgccgcc tgatggtcaa tcgctcgata ggcggcgggg ctgaggaaac
     1621 cgaagcctcc gaggccgccg ttgcaatcgc aaatccggac atctttgcac ccaaaagtcc
     1681 cgatgccgct gcaccggcaa gctgaacaag gttgcgtcga gtcgcttgca tctgaagtaa
     1741 acatgtatca tagacgagat tcatcttgca acatatgtat catgtcgtga gaaattctat
     1801 ggctgccgag agaaagcatg ctttgaaaga cggtcataag ggggttattt gggtgactca
     1861 gaaggcagga cagcggtcct gccaccaccc aggagtcatg agaaatgtta cggatcattg
     1921 ggttcacccc gcgcctcatc ccagccattc atgggggacg gcgcctctca ccgccagctc
     1981 ggccgccgtt cgcgattctg cgcatgttct gcgaggcgct gcgggaaggt ttggcggcgc
     2041 atcgccacta cgaggagctc agatcgaagg gccttgcgca cgagtcggcg ctgcgacacg
     2101 cgctcgctcc cgcgccctcg cgctcgggat gcgaggcgct cacgccgttg tggtttgcgg
     2161 gcaaggcata gaccgccact tgcggttcct tgccatggcg gacgagaaag acgccggcgc
     2221 ccatgcgccg tccacaagct taatctcgcc ccaggactca gcgccgggcg cgggcggcgt
     2281 ggcgtggctt cgacatcaac ctgtcgagct gacggcggtc ctcggcggct tcggcctgaa
     2341 gccactcgct gaaggcgacg atcttcggca atttcgcgac ggccttcgag cagacgatcc
     2401 aatacgcgta ggacaccggc atggcgatgt cgaatggacg gataagccgc ccgccgatca
     2461 aatcccatgc cgccagtgcg gtgcgagcga gcgctacgcc ctgcccatcg accgcggcat
     2521 cgatcgccat gcttgcctga ttgagaatgg ggccgcgcga tgggtcgacg gcggtgacgc
     2581 cggcaaagtc gagccactgc cgccaacctt gccgatcgct cacatgcagc agcgggaaac
     2641 gcgcgagatc cccgggcgtg cgcggccgat tgcgcccggc gagaagcttc ggactgcata
     2701 ccggaaacag ctcctccgtg cacagacgcg tgacgtggag tccggcggga gtgccgtcgc
     2761 cgtgacgaat ggcgagatcg atgtcctcgc gcgcgaagtc gacgtgatgc agcgaggcgc
     2821 tcaccctgag gtcgatctcg ggatgggcct cggcgaaacg gccgagccgg tggacgagcc
     2881 acttcgccgc gaaattgggc gaggtgctga ccgtgagcgc gccgccgctc tggcgctgca
     2941 gcaaccgctc cgttccgtcg ccgatgcggt cgaaggcatc acgcaccacc accagataag
     3001 cgcgccccgc ctcagtgatg accaaccgct gccgctcgcg attgaacagc ttcagtccaa
     3061 gctcggcctc gagcgccttc acctgatgac tcaccgcccc ctgagtgacg cagagctcct
     3121 cggcggcgcg ggtgaagctc tcgtggcgtg ctgccgcctc gaaggccttg agtgcattga
     3181 gcggcggcaa gcggcggggc atcggccggc caatcatgag aaaaactacg gcaggctaga
     3241 gaaagcatgg tttgcctgca atgcaatttc gacctgtcct ggagccagat cattctcagg
     3301 agagccgcca tcatgaccga agtcttcgta cttggttttc cccgcagcac ttacgtccat
     3361 atcgtccggc ttatactcac tcacaaagga gtttcgtaca cgttccgtga tctcgagccg
     3421 gagatgggct ctgtcagcca cctcgcattg catccgttcg atcgcgtgcc gatccttcag
     3481 cagggcgact ttacgctcta cgaaaccagc gcaatcgcca cgtacgtcga tgaggcattc
     3541 gaaggtccgg ccgtgcagcc aaaagacgtc cgcgcacgcg cgcgcatgaa ccaatggatc
     3601 agttccgtca attcctacta ctacccgtac atgatctacc acgttacaca cgagcgattg
     3661 gtgtacccgc agctgggaat cgccagcgac gagaaagtgg ttgctcacgc actgccaaag
     3721 gtccagcgcg cgctcgacgt cttggagaag gcgcttggcc acggggccga ttacatcctc
     3781 ggcagcgagc tcacgcttgc agatttcttc atgctgccga gcacgtatgc attcgggctg
     3841 accgaagaag gcaaggcgat gtatccgaaa tatcctttgt tttgcggctg gcgcgcgcgc
     3901 atggaagcat tgccggccgt caagcgtttt cgcgccgccc ttccgccgcg cgatccgatt
     3961 gagcacgccc gcaaatgggc tgtttcgcac cgtccgaaat attgacacac gcacgaggcc
     4021 cattgcgtcc gtgcggcgca gtcgctacat cccgcccgcg gcaatcgccg gagattgcct
     4081 taagggtggc ccatgcgcgc ggaagttcag accatcgtcg acgaaatcaa gcagtcgatc
     4141 gggctgctga ggaggcatct ttgacgtcga caaggcgcgc acgcggcttt ccgaactcaa
     4201 caagcaggcg gaagaccccg cgctgtggga cgatcagcag cgcgcccagc gcgtgatgca
     4261 ggagcgcacc gcactcgagg atcagctgac cgccctcggc cgcatcgagc aggagctcga
     4321 cgatcagctc accatgatcg agctcggcga ggccgagaaa gaccagaagg ccgtcgccga
     4381 ggcggaagcg gcgctgcaga agctcaaggc ggaagtcacg cggcgcgagc tcgaagcgct
     4441 cctctcgggc gaggccgacg ccaacgatac gtatgtcgaa gttcatgccg gtgcgggcgg
     4501 caccgagagc caggattggg ccagcatgct tcttcgcatg tatacccgct gggcggagca
     4561 acacggctat aagatcgagt ggctcgagga gaccgagggc gaggcggccg gcatcaagtc
     4621 ggccaccgtc caggtcaagg gccacaacgc cttcggctgg ctcaagaccg agaacggggt
     4681 gcatcgcctg gtgcgaattt ccccgttcga tgccaacgcg cgccggcaca cctcgttcgc
     4741 cagcgtcaat atctatccgg tggtcgacga tcgcatcacc gtcgacatca aggaagcaga
     4801 tgtgcgcgtc gataccatgc gggcgggggg tgccggcggc cagcacgtca acaagaccga
     4861 gtcggcggtg cgcctcacgc acatcccgac caacattgcc gtggtctgtc agaacgaccg
     4921 ctcgcagcat cgcaaccgcg cgcaagcctg gcagatgctg cgcgcgcgcc tctaccagcg
     4981 ggagttgaaa cggcgcgagg aaaaagccgc agccgagcag gccgccaaga ccgacatcgg
     5041 ctggggccat cagatccgat cgtacgtgct gcagccctac cagatggtca aggatctgcg
     5101 caccggtgtg cagacctcca acaccggcgc cgtgctcgac ggcgacctcg atcagttcat
     5161 ggaggcggcg ctggcgcaaa aggccttcgg gacagcaccg aaggaggtgg aggacgtcga
     5221 ctaactagac cattctttcg cggtcggcct ggcgtcgtcg acaagccgac cgttgatggc
     5281 gccttcactt gcgcgcgttg cgccaatcca agtccaaaag cacgtttcgg atcggctcag
     5341 tactttgctt cgaacgcggg attggccgtg aacgaggggt tcaccgtctc ggccgaagcc
     5401 acgggagcgc tgcgtggctg atcaccggcg gcggcatact gtgtcttgcg gtccgtgctc
     5461 ctcagcaggt tcttcaccgc ttccggcagc tgtccggcgg ctagcctggt gggcgggctg
     5521 tcgaggtgct cgaccaccgc caggcgggtg acctcgcctc tgaggaacgc gttcaagaac
     5581 tcgggatagt tgttgaagga cacgcatcca ttcgactgtc cgttcgcgcc cagcatgtag
     5641 gtatgagcaa ggatgccgtc gcgcccgtac attctgctgt agtcgaccgg attgaggcga
     5701 atggcgcgaa ccccgtgaaa caatcgctcg cgcatagtga gatggtacag acccggcggc
     5761 gttggtccgc gcatccgcag atgcacgtgg cgcggattgt ccatgaagcc gccgagtccg
     5821 gagtgagcct ccagccggcg gccgcttggc aggtaaacgg tacgcgccgt gatatcgtag
     5881 atcgcagtgc gaccgtcgtc ctcgatggac gcaacctctt tcactttctc tttgcgtgcc
     5941 gggctaaagc tgaagctaag accaatgctc gctttggcga tggtcggctt cggcggagcc
     6001 tcggcgcgct tcttctcgat gccctgatcc ggcggcaggc gcaggctgct cgcaagcacc
     6061 tgcatggccg aagcgagatt ctcgtcgaac gacgccgggc aatcttcgct cgaggcaaaa
     6121 cgtttgtcga aagacgcggg atgatcgccc agcgcggtga aacggtcctc gaatgcggcg
     6181 gcgcggcagg ctgatgcggc tgtgtccgtc agcacaggcc attggctggt cggggcatcg
     6241 aacaatccga cctgcggttc gaggcttgcc agccgtacgc gctcgcccgc cgactccgat
     6301 cccagcggcg cgccgagccg aaaaatctca gggtggatcg tcccgaaaac agaaatgcgc
     6361 gcagcggaca gctttgtgtc tgtcggccct gcctgcgtcc ctgccgattt aaggacgaac
     6421 cccactagca tcacggcgat tccaagcgga atcccgcgga cccccaattg caccaacacg
     6481 tcccccaatc acgccgcgtc gccccgggca cttcgcccaa ccgcaacgca cgtcccccga
     6541 cgcacctgaa agcaaacatg ctgattgcgg caagaatcgt tcggatcgat ccggtcagcg
     6601 cgtcacggcg attaatctgc gtgcatcggc ggatcgagtg cttgcttgcg ttgcctcaga
     6661 gagcgccggc gagccttgtg ccggcgcgca agaatttctg cggatcgact gcctcgcctt
     6721 tgagccgcgt ctcgtagtgc aggtgcggac cggtggagcg accagtcgaa ccgagtttgc
     6781 ccaggatttg cccgcttttg accgactggc cgacgcgaac gtcgatcgag gagaggtgag
     6841 cgtagcgcgt tgagacgcca ttgtggtggt cgatatcgac cgtccgtcca tagccgccgt
     6901 tccaccccgc ggcgatcacc gtgccgtcac cggtcgcgcg taccggatcg cccgtctcgc
     6961 catgtagatc gagtccggtg tgcagggccg gcgtgcccag gaacgggtcg gtgcgcacgc
     7021 cgaagcccga ttgcagatcg agctcgctgt cgatcggctt gcgcaccgga atgctgccga
     7081 gcgtgcgggt gaggcgagtg atttgcgcgc gtgc
//
LOCUS       DATCWM010000016         2192 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_280914, whole genome shotgun sequence.
ACCESSION   DATCWM010000016 DATCWM010000000
VERSION     DATCWM010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2192
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_280914"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..564)
                     /locus_tag="VIQ50_00315"
     CDS             complement(<1..564)
                     /locus_tag="VIQ50_00315"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEY9358845.1"
                     /translation="MTARIRQFLRKRAEDGPCLVVDLDVVRENYLAFAKALPDTKVFY
                     AVKANPAPEVLALLAALGSSFDAASVAEIEMALAAGATADRISFGNTIKKERDVARAY
                     SLGVRLYAVDCLAEVEKIARAAPGSRVFCRILSDCVGAEWPLSRKFGCEPAMAADVLE
                     HAHRLGLEAYGVSFHVGSQQRNPHAWDR"
     gene            complement(1107..1367)
                     /locus_tag="VIQ50_00320"
     CDS             complement(1107..1367)
                     /locus_tag="VIQ50_00320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9358846.1"
                     /translation="MSRATSPAGDRRIAWQNVLTVLSAAILIGAEVFGAAFAGGWAVA
                     SYLDLGPYGVHVMQGIFFFCGIAVMAAFIRNARRVEPFTTRG"
     gene            complement(1394..>2192)
                     /locus_tag="VIQ50_00325"
     CDS             complement(1394..>2192)
                     /locus_tag="VIQ50_00325"
                     /inference="COORDINATES: protein motif:HMM:NF012904.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HEY9358847.1"
                     /translation="STEVASLTFEEQRRVLAIAQDEIGDRVPLVNGVWADGSIEAARI
                     ARMAADGGASALLIFPPGPFTLGQSPPMALAHFKRIADATDLPLIVFQYPLATGQGYP
                     RDTLLKMVDEVASIRAIKDWAGNVAQHEMHIRTLQSLPRPVNVLSTHSAWLLSSLVLG
                     CNGLLSGSGSVIADLQAQLFHAAKANDLAEARRLNDRIYPLARVFYADPWADMHNRMK
                     EALVLLGRLPRAVVRPPLVKLSGAEIERIRAALVEAGLMSAKARNAA"
BASE COUNT          374 a          730 c          738 g          350 t
ORIGIN      
        1 ccggtcccag gcatgcggat tgcgctgctg cgaaccgacg tggaacgaga cgccataggc
       61 ttcgaggccg agacggtggg cgtgctccag cacgtcggcc gccatggcgg gctcgcagcc
      121 gaatttgcgc gacagcggcc attccgcccc gacgcagtcg gagaggatgc ggcaaaagac
      181 gcgggagccg ggcgcagcgc gggcgatctt ctccacctcg gcgaggcagt cgacggcgta
      241 aaggcgcacg ccgagcgaat aagcgcgcgc cacgtcgcgc tccttcttga tggtattgcc
      301 gaaggagatg cggtctgccg tcgcgccggc cgcgagcgcc atctcgatct cggcgaccga
      361 ggcggcgtcg aagctcgagc ccagcgcggc gaggagcgcg agcacctcag gcgccgggtt
      421 cgccttgacg gcatagaaca ccttcgtgtc cggcagcgcc ttggcgaagg ccagatagtt
      481 ctcgcgcacc acgtcgagat cgacgacgag gcaggggccg tcctcggccc gcttacgaag
      541 gaattggcgg atgcgcgcgg tcattggcgc tctccccacg gctagcaggc ggcgaaccgc
      601 caggtgatgc gggttgtgaa ctcgtcacca gtgcgcgatg gggacgcact ggcgaacgtg
      661 ggctcttaac ccgctgtgct gccttggatt ggaatgggga gctcccactc cgcacggccg
      721 gcaatgatga acaagcctct tcggtagcca cgccagcgtt ggaatgctgg cagagaccaa
      781 ggaagcccgg tccgtcgttg ctttaagccg cgtcccccgt tgagcgcggg gtgtgccggt
      841 ttcgcctccg gctgccggtc aagtggattc ggagctcaga cgatcgcagt actcagtctg
      901 cgatcttgct ccgggcggct gtccggcctc ttgtccggat gcccaccgac cgacacacgg
      961 ccacaggcac gtgcgaaatt gggcaatcgc gcacataagc aatatgagcg cacttgacaa
     1021 gcattttttt gtgtgccgcg tctcggcgcg agcagatcgg cggcgaacgc ggttggcgaa
     1081 gcttctcgct tgccctgaag agaggctcag ccgcgggtgg tgaacggctc cacgcgccgc
     1141 gcgttgcgga tgaacgccgc catcactgca atgccgcaga aaaagaagat gccctgcatc
     1201 acatgcacgc cgtatgggcc cagatccaag tagctggcga ctgcccagcc gccggcaaaa
     1261 gcagcgccga acacctcggc gccgatcaga atcgccgcgc tcagcacggt cagcacgttc
     1321 tgccacgcga tcctgcgatc accggctggg ctcgttgcgc ggctcattgt ctcactcctt
     1381 ttacggatcc gccctaggcc gcgttgcgcg ccttcgcgct catgaggcca gcctccacca
     1441 acgcggcgcg gatgcgctcg atctcggcgc cggagagctt gaccagcggc gggcgcacca
     1501 ccgcgcgcgg cagccgcccg agcagcacca gcgcctcctt catgcggttg tgcatgtccg
     1561 cccaagggtc ggcatagaac acccgcgcca agggatagat gcggtcatta aggcgccgcg
     1621 cctcggcgag gtcgttcgcc ttggccgcgt ggaacagctg tgcctgcaaa tccgcgatca
     1681 cgctgccgct gccggaaagg agcccgttgc agcccagcac gagcgagctc aacagccacg
     1741 cgctatgggt gctgagcacg ttcaccggcc gcggcaggct ctgcagcgtg cgaatgtgca
     1801 tttcgtgctg cgccacgttc cccgcccagt ccttgatggc gcggatgctc gccacctcgt
     1861 ccaccatctt gagcagcgtg tcgcgcgggt agccctggcc ggtggcgagc ggatattgga
     1921 agacgatgag ggggaggtcg gtcgcgtccg cgatgcgctt gaaatgcgcc agcgccatgg
     1981 gcggcgattg ccccagcgtg aagggccccg gcgggaagat cagtaacgcg gaggcgccgc
     2041 cgtccgcggc catgcgggcg attctggccg cctcgatgct gccgtccgcc cacaccccgt
     2101 tcaccagcgg cacccggtcg ccgatctcgt cctgagcgat ggcgagcacg cggcgctgct
     2161 cctcgaaggt caaggaggcg acctcggtgg aa
//
LOCUS       DATCWM010000017         2724 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_345686, whole genome shotgun sequence.
ACCESSION   DATCWM010000017 DATCWM010000000
VERSION     DATCWM010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2724
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_345686"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            270..2069
                     /locus_tag="VIQ50_00330"
     CDS             270..2069
                     /locus_tag="VIQ50_00330"
                     /EC_number="6.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain-acyl-CoA synthetase"
                     /protein_id="HEY9358848.1"
                     /translation="MELLDRLIAEVTSLKGALRTLKLTTPIAKNPTRVFPQVILELAD
                     KYGDAPALLSDREHFTYRELAARSNRYARWALAQDLRKGDTVCLMMPGRPEFLAAWIG
                     ITRVGGVVALINTHLTGTALAYCINVVSPKHIIVAAELFDALEGTRAHIAGEAKVWLY
                     GDADANFPRIDRALDSVGGGNLAAAELPALTIEDRALYIYTSGTTGLPKAANVNHYRV
                     MLASYAFAGVMDTRPTDRMYDCLPLYHTAGGVVATGALLVKGGSVVIRDKFSAREFWD
                     DVVRWDCTCFQYIGELCRYLVNSPPSPKEREHHLRLACGNGLRPDVWPQFKRRFRIPQ
                     IIEFYAATEGNVSLFNFDGKEGAVGRLPWWIAARFPTKIVRFDMEHQQPMRDERGFCI
                     ECEVDEPGEVIGKIMKDASRPGQRFEGYANETETNRKIMHDVFKNGDVWFRTGDLMRK
                     DKNGYFYFVDRIGDTFRWKGENVSTTEVEEAVGRFDGILETNVYGVEISGHEGRAGMA
                     AIVAKDNLNLTALHDYIAQQLPEYARPVFLRIRKDNDVTSTFKQKKINLVKEGFDPGR
                     TVDPIYFNDPQRKAFVRIDPALYERINSGELRL"
     gene            2113..2634
                     /locus_tag="VIQ50_00335"
     CDS             2113..2634
                     /locus_tag="VIQ50_00335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF924 family protein"
                     /protein_id="HEY9358849.1"
                     /translation="MLAFWRAAGADKWFEKSEAFDLEVRRRFLSLWHAVRAGELVYWE
                     ETPEGALARVIVLDQFPRNMFRDDRRTYATDELARGVAERAIGRGFDRQVSHPERQFF
                     YLPFMHSEDRADQERCVALARGYGDDEFTRYAEDHADIVRRFGRFPHRNAALHRATSA
                     EEQAFLDDGGFAG"
BASE COUNT          523 a          895 c          854 g          452 t
ORIGIN      
        1 gaagcccccg ccgatgacga ttactcccgc ggtcgagcag agttcgcccg caaggtagcc
       61 gcggggctac cgatgtcgca atcgaagcat cgcagcccgg atgagcgaag cgacgctcgc
      121 tcgcctgcct ggccggcgcc gcggatgtcg ctgcgcgacc atcgccgatc gcggccacgg
      181 gacgatgggc gctcttgcca ccccctgccc gctgcctgat gcttcgcggc aacggccggc
      241 ggcaagcggc ggccagcacc ggaccagtca tggaattgct cgatcggctg atcgcggagg
      301 tgacctccct caagggcgcc ttgcgtaccc tcaagctgac gaccccgatt gccaagaacc
      361 cgacccgcgt cttcccgcaa gtgatcctcg agctcgccga caagtacggc gacgcgccgg
      421 cgctcctctc ggatcgcgag cacttcacct atcgcgagct cgcggcgcgc tccaaccgct
      481 atgcgcgctg ggcgctggcg caggatctgc gcaagggcga cacggtctgc ctgatgatgc
      541 cgggtcggcc ggaattcctg gcagcgtgga tcggcatcac gcgcgtcggc ggcgtggtcg
      601 cgctcatcaa tacccacctc accggaacgg cgctcgccta ttgcatcaac gtggtcagcc
      661 ccaagcacat catcgtggcg gcggaattgt tcgacgcatt ggaaggtacg cgagcacata
      721 tcgcgggcga ggcaaaagtt tggctttacg gcgatgccga cgccaacttc ccccgcatcg
      781 atcgcgcgct cgacagcgtc ggcggcggca atctcgccgc cgcggagctt cccgcgctca
      841 ccatcgagga tcgcgcgctc tacatctaca cgtcgggaac gaccggcctg ccgaaggcag
      901 ccaacgtgaa ccactatcgc gtgatgctgg cgagctacgc gtttgccggc gtcatggaca
      961 cgcgccccac cgaccgcatg tatgattgcc tgccgctcta ccacaccgcc ggcggcgtag
     1021 tcgcgaccgg cgcgcttctg gtcaagggcg ggtcggtagt gatccgggac aagttctccg
     1081 cgcgcgagtt ctgggacgac gtcgtgcgct gggactgcac ctgctttcaa tacatcggcg
     1141 aactttgccg ttatctcgtc aactcgccgc ccagcccgaa agagcgggag catcacttgc
     1201 gcctggcgtg cggcaacggc ttgcggcccg acgtgtggcc gcaattcaag cggcggttcc
     1261 gaattccgca gatcatcgag ttctatgccg cgaccgaagg caacgtctcg ctgttcaact
     1321 tcgacggcaa ggaaggcgcg gtgggccggc tgccctggtg gatcgccgcg cgcttcccca
     1381 ccaagatcgt gcgcttcgac atggagcacc agcagcccat gcgcgacgag cgcggcttct
     1441 gcatcgagtg cgaggtcgac gagccgggcg aagtcatcgg caagatcatg aaggacgcat
     1501 cgaggccagg gcaacgtttc gagggctatg ccaacgaaac cgagaccaac cgaaagatca
     1561 tgcacgacgt gttcaaaaat ggcgacgtgt ggtttcgcac cggcgatctg atgcgcaagg
     1621 acaagaacgg ctacttctat ttcgtcgacc gtatcggcga caccttccgc tggaaaggcg
     1681 agaacgtgtc gaccaccgaa gtcgaggagg cggtgggacg gttcgacggc attctggaga
     1741 ccaacgtcta cggggtggaa atttccggcc atgagggccg cgccggcatg gccgcgatcg
     1801 tcgctaagga caacctcaac ttgaccgcgc tgcacgatta catcgcgcag cagctgcccg
     1861 aatatgcgcg gccggtattc ctgcgcatac gcaaggacaa cgatgtcacc agcacattca
     1921 aacagaagaa gatcaatctg gtgaaggaag gcttcgatcc cggccgcacc gtcgatccga
     1981 tctacttcaa cgatccgcaa cgcaaggcgt tcgtgcgtat cgaccccgca ctgtacgagc
     2041 ggatcaattc cggcgagctg cgcctatgac cggcggcgcc gcgttgacga agccgcggcc
     2101 cgcccagctg acgtgcttgc attctggcgc gcagccggag ccgacaaatg gttcgagaag
     2161 agcgaggcct tcgatctcga agtcaggcgg cgctttttat cgctctggca cgccgttcgc
     2221 gcgggcgaac tggtgtattg ggaagagacg ccggaaggcg cgctcgcgcg tgtcatcgtg
     2281 ctcgaccaat ttccgcgcaa catgtttcgc gatgaccggc gcacgtacgc gactgacgaa
     2341 cttgcccgcg gcgtcgccga gcgcgcaatc ggccgcggct tcgaccggca ggtctcgcat
     2401 cccgagcgcc agttcttcta tctgccgttc atgcactcgg aggatcgcgc cgaccaggag
     2461 cgctgcgtgg cgctcgcgcg cggctacggc gacgacgaat tcacgcgcta tgccgaagac
     2521 catgccgaca tcgtccgccg cttcggacgg ttcccgcacc gcaacgcggc gctgcaccgc
     2581 gccaccagcg cggaggagca ggccttcctc gacgacggcg gctttgccgg ctaaagcatg
     2641 atcccgaaaa gtgtgcagcg gttttcggaa aagatcatgc tcaaacaaga agctagagcg
     2701 ggatgacgat tcaacgaaaa gtca
//
LOCUS       DATCWM010000018         2771 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_329490, whole genome shotgun sequence.
ACCESSION   DATCWM010000018 DATCWM010000000
VERSION     DATCWM010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2771)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2771)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2771
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_329490"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..164
                     /locus_tag="VIQ50_00340"
     CDS             <1..164
                     /locus_tag="VIQ50_00340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018640942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HEY9358850.1"
                     /translation="RREAICASIAELRPGDVLLIAGKGHETGQIIGKQVLPFSDHEAV
                     AAALAGRVA"
     gene            161..1618
                     /locus_tag="VIQ50_00345"
     CDS             161..1618
                     /locus_tag="VIQ50_00345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0047480 -
                     UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoylalanyl-D-glutamyl-2,
                     6-diaminopimelate--D-alanyl-D-alanine ligase"
                     /protein_id="HEY9358851.1"
                     /translation="MTDRPLWSVEAMLAAMRATPAGPLPPAVPGLSIDTRTIAPGEAF
                     LAIQGDNRDGHDFVEAALEARAGLTVVAADKRARFPEHAPLIVVADVLAGLRDLARAA
                     RGRTQAKVIAVTGSVGKTGTKEALRLTLARSGETHASVASYNNHWGVPLSLARCPESA
                     HYAVFEIGMNHAGEIEPLTRLVRPQVAIVTAIEPVHLEFFGSLEAIADAKAEIFLGLE
                     RGGAAVINRDNPQFMRLERSARDVGVERIVSFGEHARADARLIKCSLQAETSTVQAQI
                     LGTEVTYKLGAPGRHLVLNSLSVLAAAALVGADLALAALALADLQPASGRGSRLTLHM
                     PRGTALLIDESYNANPASMRAALALLGQTDLRQLGRRIAVLGDMLELGPRGAELHREL
                     AVAVLAHGIDLVFCCGPLMRALWEALPSSRKGGYAETSAALESQVLAALQPGDAVMVK
                     GSLGSRMTPIVKALQSRCRRETPVLAPAQASTVNG"
     gene            1622..2707
                     /gene="mraY"
                     /locus_tag="VIQ50_00350"
     CDS             1622..2707
                     /gene="mraY"
                     /locus_tag="VIQ50_00350"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HEY9358852.1"
                     /translation="MLYWLSAFSDTIGPLNVLRYITFRTGGAMFTALVFVFLFGHSII
                     DQLRLKQGKGQPIRSDGPQSHLVTKKGTPTMGGLMMLFGLLVSTVLWANLANRYVWIV
                     LGVTLSFGAIGFYDDYLKVTKQTHAGFSGKLRMAIEALIAVAACYFIVSLGRQPFATS
                     VTFPFFKELVFPLGWFFILFGAFIIVGAGNAVNLTDGLDGLAIVPVMIATGCFGVFAW
                     VVGNGVLSEYLQLHFVPGTGELAVVCGAVIGAGLGFLWFNAPPASIFMGDTGSLALGG
                     MLGAIAVATKHEVVLGIVGGLFVLEAVSVIVQVVSFKLTGKRVFRMAPIHHHFEQLGW
                     TEPQIVIRFWIISVVLALVGLSTLKLR"
BASE COUNT          405 a          922 c          894 g          550 t
ORIGIN      
        1 cccgccgcga ggccatttgc gcgtccatcg cagaactgcg ccccggcgac gtgttgctga
       61 tcgcgggcaa gggccatgaa accggccaaa tcatcggcaa acaggtgttg ccattcagcg
      121 accacgaagc ggtcgccgcc gcgcttgccg ggagggtggc atgaccgatc ggccgctctg
      181 gtccgtcgag gcaatgctgg ccgcgatgcg cgccacgcct gccggtccat tgccgcccgc
      241 ggtgccgggc ctttcgatcg acacgcgcac gattgcgccc ggcgaagcgt tcctcgccat
      301 ccagggtgac aaccgcgacg gccacgattt cgtcgaagct gcgctcgaag cgcgcgcggg
      361 ccttacggtc gttgccgccg acaaacgcgc acgctttccc gagcacgcgc cgctcatcgt
      421 cgttgccgac gtgctcgcag gcttacgcga tttggcgcgg gcggcgcgcg ggcgcactca
      481 ggcgaaagtc attgccgtca ccggctctgt cggcaagacc ggcacaaagg aggcgctgcg
      541 cctgacgctt gccaggagcg gcgaaaccca tgcttcggtc gcttcctaca acaatcactg
      601 gggcgtgccg ctctcgctcg cgcgctgtcc ggagagcgcg cactacgctg tgttcgaaat
      661 aggcatgaat catgccggcg agatcgagcc gctcactcgc ctggtgcggc cgcaggtcgc
      721 gattgtcacc gcgatcgagc cggtgcacct cgaattcttc ggctcgctcg aggcgatcgc
      781 cgacgccaag gcggaaatct ttctcgggct cgagcgcggc ggtgcggcgg tgatcaaccg
      841 cgataacccg cagttcatgc ggctcgagcg cagcgcgcgc gacgtcggtg tcgagcgcat
      901 cgtctcgttt ggcgagcacg ctcgcgccga cgcgcggctc atcaagtgct cgctccaggc
      961 ggaaacctcc accgtgcagg cgcagattct cggaaccgag gtcacctaca agctgggggc
     1021 gccgggccgg cacctggtcc tcaattcgct ttccgtgctg gctgccgcag cgctggtcgg
     1081 agccgacctc gcgttggcgg cgctggcgct cgcagatctg cagccggcga gcggacgcgg
     1141 ctcccgcctg accctgcaca tgccccgcgg cacggcgctc ctgatcgacg aaagctacaa
     1201 tgccaatccg gcctccatgc gtgcggcgct cgccttgctc ggccagaccg atctgcgcca
     1261 gcttggccgg cgcattgcgg ttctcggcga catgctggaa ctcgggccgc gcggcgccga
     1321 gttgcatcgc gaactggccg tcgccgtgct cgcccatggt atcgatctcg tattctgctg
     1381 cggaccgctg atgcgcgcct tgtgggaggc gcttccctcc tcgcgcaagg gcgggtatgc
     1441 cgagacgtcg gccgccctcg aatcgcaggt gcttgctgcg cttcagccgg gcgatgccgt
     1501 catggtcaag ggatcgctcg gctcgcgtat gacgcccatc gtcaaggcgc tgcaaagccg
     1561 ctgtcgccgc gagacgccgg ttctcgcccc cgcccaagct tcgaccgtca acggctgacg
     1621 catgctctac tggctctccg cattctcgga tacgatcggg cctctcaacg tccttcgcta
     1681 catcacgttc cgtaccggcg gagcgatgtt caccgcgctg gtcttcgtgt ttctgttcgg
     1741 tcactcgatc atcgaccagc tgcggctcaa gcagggcaag ggacagccga tccgcagcga
     1801 cggaccgcaa tcacacctgg tcaccaagaa aggcacgccg actatgggcg gcctgatgat
     1861 gctgttcggt ctcctcgtgt cgaccgtgct gtgggccaat ttggccaacc gctatgtttg
     1921 gatcgtgctc ggcgtaacgc tctcgttcgg cgccatcggc ttctatgacg actacctgaa
     1981 ggtcaccaag cagacgcatg ccggcttttc cggcaagctc cgcatggcga tcgaggctct
     2041 gatcgcggtg gcggcttgct actttatcgt gtcgctcggc cgccaaccct tcgcgacatc
     2101 cgtcaccttt cccttcttca aggaattggt attcccgctc ggctggttct tcatcttgtt
     2161 cggtgcgttc atcatcgtcg gcgcgggcaa cgcggtgaac ttgacggacg gcctcgacgg
     2221 gttggcgatc gttccggtca tgatcgcgac cggctgcttc ggcgtgtttg cctgggtcgt
     2281 gggcaacggc gtcctttcag agtatctgca actgcatttt gttcccggga ccggcgagtt
     2341 ggcggtggtg tgcggcgccg tgatcggggc gggactgggc ttcctctggt tcaatgcacc
     2401 gccggcatcg attttcatgg gcgacaccgg ttcgcttgcc ctcggcggca tgctgggagc
     2461 catcgcggtc gcgaccaagc acgaggtcgt gcttggcatc gtcggggggc tattcgtgct
     2521 cgaggcggtc tcggtgatcg tgcaggtggt ctcgttcaag ctcaccggca agcgcgtctt
     2581 tcgcatggct ccgatccatc accatttcga gcagctcggc tggaccgagc cccagatcgt
     2641 gatccgcttt tggatcattt cggtcgtgct cgcgctggtg gggctgtcca cgctcaagct
     2701 gcggtgatga ttcctgtcac cgccttcgcg ggaaagaagg ttgccatctt cggcctcggc
     2761 gggtcggggg t
//
LOCUS       DATCWM010000019         2045 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_129723, whole genome shotgun sequence.
ACCESSION   DATCWM010000019 DATCWM010000000
VERSION     DATCWM010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2045
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129723"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..887)
                     /locus_tag="VIQ50_00355"
     CDS             complement(<1..887)
                     /locus_tag="VIQ50_00355"
                     /inference="COORDINATES: protein motif:HMM:NF015425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-3B synthase"
                     /protein_id="HEY9358853.1"
                     /translation="MTALHIRGDCPRLAEPMQTGDGLLARLVTAGPIPIDAFAAFRAA
                     AQKHGNGILEISARGNLQVRGLTPDSAPLFASAVAELDIELCDSVPVISSPLPDDPTA
                     LIDGDALASALRRAIAARGLVLAPKVSVIVDGGGRLHLDALTADLRLRAIETEEGIKL
                     RVALAGDAASATPLRFVAPQEAINAAISVLALIASRGAAARAADLLQSEGIGIFRAAA
                     RSRLEAVPLPKRPRAEPIGLHRLRGGQCAIGVALAFGHASAGDLMAFARVARINGATW
                     VRPAPGRALLLGPIDEMTG"
     gene            complement(884..>2045)
                     /locus_tag="VIQ50_00360"
     CDS             complement(884..>2045)
                     /locus_tag="VIQ50_00360"
                     /EC_number="6.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008596005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cobaltochelatase subunit CobN"
                     /protein_id="HEY9358854.1"
                     /translation="RGRRDVVPTGRNLFTADPRLLPTPTAMELGRLAAGEVIRLYLQT
                     HGEMPRALVIDLWGSATLRTGGEEIAQGLALMGCRPVWDGATGRVTGIEVLPCAAMGR
                     PRVDVTWRISGLFRDLFPAQIALLDAATRLVAEREEDGDENPLAAAARVARGGRLDRI
                     FGNAPGAYGAGAEDLLGCDTDEADIGAAYLAATSHAYGGAEGEGRPDVGFAKQVASAD
                     LLLHPSNDPTRDLLEGAEDVAHIGGFAAAASLLGRAPDFVVLDTTNPGQPRARTLPQA
                     LARIVRGRATNPLFIEGMMRHGARGAAELAETVDRLVDFAETTGAVSSALFDLVHETY
                     LADPEIREFLLRENPDAAQAIAERLEGARRKGLWHPRRNDIALTKMHAEASA"
BASE COUNT          358 a          665 c          713 g          309 t
ORIGIN      
        1 aagccggtca tctcatcgat aggcccaaga agaagagcgc gacccggagc aggtctcacc
       61 caggtcgcac cgtttatacg agctacacgg gcaaatgcca tcaagtcgcc ggccgaggca
      121 tgaccgaaag caagcgccac accgatggcg cattgcccgc cccttagcct gtgcagcccg
      181 atgggctccg cgcgtggccg ttttggcaga gggacggcct ccagtctaga tcgagccgcc
      241 gcacggaaga tgccgatgcc ctcgctttgc agcagatcgg cagcccgcgc cgcggcgccg
      301 cgcgatgcga tcagcgcgag gacgctgatg gcggcgttaa tcgcctcttg gggcgcaaca
      361 aagcggagcg gcgtcgcaga tgctgcatca cccgcgagtg caacacgaag cttgatgcct
      421 tcctccgtct caattgcgcg taagcgcaga tcggcggtga gcgcatcgag atgaagccgc
      481 ccgcctccgt cgacaatcac agacactttc ggcgcgagca caagcccacg cgcggcgata
      541 gcgcggcgaa gcgccgaggc gagcgcatca ccatcgatca gtgccgtcgg atcgtcggga
      601 agcgggcttg agatcaccgg cacgctatcg caaagctcga tgtcgagttc tgcgacggcg
      661 gaggcaaaca gcggcgcgga atccggcgtg agtccgcgca cttgcaggtt gccccgtgcg
      721 ctgatctcca agatgccgtt gccgtgcttc tgcgcggcgg cgcggaatgc agcaaaggca
      781 tcgatgggga ttggccccgc agtcacgagg cgcgcgagaa ggccgtcacc ggtctgcatg
      841 ggctctgcca gacgcgggca gtcgccgcgg atgtgaagcg cggtcatgcc gaggcctccg
      901 cgtgcatctt tgtcaaagcg atgtcgtttc ggcgcgggtg ccacagccct ttccgccgcg
      961 cgccctcgag ccgttccgcg atcgcctgcg cggcatcggg gttttcgcgc aacaggaact
     1021 cgcgaatttc ggggtcggcg agataggtct cgtgcacgag atcgaacagg gcgctcgaga
     1081 ctgcgccggt ggtctcggcg aaatcgacca gccggtccac ggtctcggcg agctcggccg
     1141 cgccgcgcgc gccgtggcgc atcatgcctt cgatgaagag cggattggta gcgcggccgc
     1201 gcacgatgcg ggcgagcgcc tgaggcagcg tgcgcgctcg gggctgtcca gggttggttg
     1261 tatcgagcac gacgaaatcc ggcgcgcgac cgagcaaaga agcggcagcg gcaaaaccgc
     1321 cgatatgcgc cacgtcctct gcgccttcga gcaggtcgcg ggtcggatcg ttgcttgggt
     1381 gcaagagcaa gtcggcgctc gccacttgct tagcaaagcc gacatcgggc ctaccctcgc
     1441 cttcggcgcc accataggcg tgggaggtag cggcgagata ggctgcgccg atatcggcct
     1501 catctgtgtc gcagcccagc aggtcttcgg cgcccgcgcc gtaggcgcct ggagcgttgc
     1561 cgaagatgcg gtcgagcctg ccgccgcgag cgacgcgggc tgcagcagcg agaggattct
     1621 cgtcgccgtc ctcctcgcgt tcggcaacga ggcgcgtcgc ggcatcgagc agcgcgatct
     1681 gcgccgggaa gagatcgcgg aagagccccg agatgcgcca ggtgacatca acccgcggac
     1741 gacccatggc ggcgcatggc agaacctcga taccggtgac gcggccggtg gcgccgtccc
     1801 aaacggggcg gcagcccatg agcgcaagac cttgggcgat ctcctcgccg ccggttctga
     1861 gcgttgcgct cccccacagg tcgatcacga gtgcgcgcgg catctcgccg tgggtctgga
     1921 gatagagacg gatcacctcg cctgcggcga ggcggccaag ctccattgcg gtcggcgtgg
     1981 gcagaaggcg cgggtcggca gtgaacagat tgcgcccggt gggcactacg tcgcggcggc
     2041 cacgc
//
LOCUS       DATCWM010000020         3354 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_91937, whole genome shotgun sequence.
ACCESSION   DATCWM010000020 DATCWM010000000
VERSION     DATCWM010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3354)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3354)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3354
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91937"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..361
                     /locus_tag="VIQ50_00365"
     CDS             <1..361
                     /locus_tag="VIQ50_00365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HEY9358855.1"
                     /translation="LDPAQTRAALAKAADANSAEAQYQLGLLLAEGIGGPKDDVAARA
                     LFEKAAAQDHPAALERMGAFAQNGRGGPQDASAAKTYYEKAAALGNEEAKAALKRAQC
                     PYVIKDKRGNVVTYLCF"
     gene            complement(390..1775)
                     /gene="asnS"
                     /locus_tag="VIQ50_00370"
     CDS             complement(390..1775)
                     /gene="asnS"
                     /locus_tag="VIQ50_00370"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: protein motif:HMM:NF003037.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004816 - asparagine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006421 - asparaginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HEY9358856.1"
                     /translation="MREVLGGQAPQNLPVTVKGWVRTRRDSKAGISFVHLSDGSAFHP
                     LQVVVPNTLPNYTDEVLKLTAGCAVEATGTIVPSPAKGQPFEMQAQAIKVIGWVDDPD
                     TYPIQPKPHSLEFLREVAHLRPRTNVIAAATRVRHTLAQAIHRFFDEDGFFWVNTPII
                     TGSDAEGAGALFRVSTLDLANLPRTPQGQVDFAQDFFGREAFLTVSGQLNVEAYCLAL
                     TKVYTFGPTFRAENSNTSRHLAEFWMIEPEIAFADLSDNATLAERLLKFTFESLLKER
                     HEDLAFFDERIEKGLVAKLEGIVSSQFVRMDYAEAVAVLERAKDKFEFPVKWGMDLQS
                     EHERYLTEKHAKRPVIVMNYPKDIKAFYMRVNDDGRTVAALDVLAPGIGEIIGGSQRE
                     ERLEVLDARMAERGIDKEHYAWYRDLRRYGTVPHAGFGLGFERTLAYVTGLANVRDAI
                     PFPRTPGNARY"
     gene            complement(1916..2317)
                     /locus_tag="VIQ50_00375"
     CDS             complement(1916..2317)
                     /locus_tag="VIQ50_00375"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEY9358857.1"
                     /translation="MQGCENSNEPPQGEPALRAIAMPADANPYGDIFGGWLLSQMDLA
                     GGAAARRRAKGRTATVAITAMTFHRPVFVGDEVTCYAQIVKVGRTSITVKVESWVRRG
                     IGEEQIAVTEGIFTYVAIDEDRRPRPVPPDD"
     gene            2495..3238
                     /locus_tag="VIQ50_00380"
     CDS             2495..3238
                     /locus_tag="VIQ50_00380"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEY9358858.1"
                     /translation="MSSDILTARKGPVLEITLNRPQIGNAASDAMAVELTKLLLGAAE
                     SAEIVVLRGAGEDFCVGRETMGKRPPGAPPEALELRRRNDVIFNCYGAFRRCEIPVIG
                     VVRGRAFGFGCAIAAVCDITLAADTAKFQVPEMAHNIMPTMVMSALVDRVPRKAMTYL
                     VWSTAVIGPQRAREAGIVSEVVPPAELDAAVEALCKQIMAAPRPARVGCKDYARAALD
                     MDVAGAIDFARSIHAVINSSSEMLPAGHK"
BASE COUNT          596 a         1097 c         1061 g          600 t
ORIGIN      
        1 gctggatccg gcccagacca gagctgcgtt agcgaaagca gcggacgcga attccgcgga
       61 agcgcagtat cagcttggat tgctgcttgc cgagggcatc ggcggaccaa aggacgacgt
      121 cgccgcgcgg gcattatttg aaaaggcggc cgcgcaggat catcccgcgg cattggagcg
      181 gatgggcgcg ttcgcccaaa acgggcgcgg cggaccgcag gatgcaagcg ccgccaaaac
      241 ctattacgag aaagccgcgg cgctcggcaa cgaagaggcg aaggcggcgc tcaagcgcgc
      301 gcaatgtccc tacgtcatca aggataagcg agggaacgtc gtcacctatc tctgcttcta
      361 gcgccgaaaa gatcaggtga atgcccgcct caataccgcg cgttgcccgg cgtgcgcgga
      421 aacgggatgg catcgcgcac gttggcaagg ccggtgacat aggccagcgt gcgctcgaag
      481 ccgagaccga aacccgcgtg aggcaccgtg ccgtagcggc gcaggtcgcg gtaccaggcg
      541 taatgctcct tgtcgatgcc gcgctccgcc atgcgcgcgt ccagcacctc gagccgttcc
      601 tcgcgctggc tgccgccgat gatctcgccg attcccggtg caagcacgtc cagggcggcg
      661 accgttcgcc cgtcgtcgtt tacgcgcatg tagaatgcct tgatgtcctt cgggtagttc
      721 atcacgatca ccggcctctt ggcgtgcttc tcggtgagat agcgctcgtg ctcggattgc
      781 aggtccatgc cccacttcac cgggaactcg aacttgtcct tcgcgcgttc gagcaccgcg
      841 accgcttcgg cgtagtccat gcgcacgaac tgcgagctga caatgccctc gagcttggcg
      901 acgagcccct tctcgatccg ctcgtcgaaa aacgcgagat cctcgtgccg ttccttcagc
      961 aagctctcga aggtgaattt cagcagccgt tctgccagcg tcgcattgtc cgagagatcg
     1021 gcgaaggcga tttccggctc gatcatccag aactcggcga ggtggcggct ggtgtttgag
     1081 ttttccgcac gaaaggtcgg gccgaacgtg tagaccttgg tgagcgcgag acagtaggcc
     1141 tcgacgttga gctgccccga taccgtcagg aacgcctcgc ggccgaagaa atcctgcgcg
     1201 aaatccacct ggccctgcgg ggtgcgcggc aggttggcaa ggtcgagggt ggatacgcgg
     1261 aacagcgcgc ccgccccttc ggcgtcggag ccggtgatga ttggcgtatt gacccagaaa
     1321 aagccgtcct cgtcgaagaa ccgatgaatc gcctgcgcca gggtgtgccg cacccgcgtg
     1381 gccgcggcga tcacgttggt gcgcggacgc aaatgcgcca cctcgcgcag gaactcgagc
     1441 gagtgcggct tgggttgaat cggataggta tccgggtcgt ccacccagcc gatcaccttg
     1501 atcgcctgcg cctgcatctc gaacggctgg cccttcgccg gcgagggcac gatcgttccc
     1561 gtagcctcca ccgcgcaacc ggccgtgagc ttgagcacct catcggtgta attgggcaac
     1621 gtgttcggca cgacgacctg cagcgggtgg aacgcggagc cgtccgacag atgcacgaac
     1681 gaaatgcccg ccttcgaatc acgccgcgtg cgcacccagc ctttgaccgt tacgggtagg
     1741 ttctgcggtg cctgcccgcc gaggacctcg cgcacgctgc attcgcgttg gtccgtggat
     1801 cgagcgccgt tgtttgaagt catggatttt ttgccttcct cacagcatcc atcaaaggcc
     1861 gaggtcgatc gtagcaagct ggccgggtct gtttctcgat gttctgttct accgatcaat
     1921 cgtccggcgg caccggacgc gggcggcgat cctcgtcgat ggcgacatag gtgaaaatgc
     1981 cctcggtcac ggcgatctgc tcctcgccaa tgccgcgccg cacccagctc tcgactttga
     2041 ccgtgatcga ggttcggccg accttgacga tctgcgcgta acacgtcacc tcgtcgccga
     2101 cgaagaccgg gcgatgaaaa gtcatggcgg tgatcgccac cgtcgcggtg cgccctttgg
     2161 cgcgccgccg tgcagcggcg ccgcccgcga gatccatctg cgacagcagc cagccgccga
     2221 agatatcgcc atacgggttg gcgtcggcgg gcatggcgat ggcgcgcagc gccggctccc
     2281 cctggggtgg ctcattggag ttctcgcagc cctgcatcgg acttccatcc tgcatcggta
     2341 gactagaata tcctctcact tacctcccaa ctccattacc ttaacccgtc gtacccgggc
     2401 atggcgcgtc gaaagacgcg cttctccccg cgtatgccga gatagaatga atggcggaac
     2461 ctgctccgcg gtcacgcttc aggaggaccc ctgcatgtcc agcgacattc tcaccgcccg
     2521 caaggggccg gtgctggaaa tcacgctcaa tcggccacag atcggcaacg ccgcctccga
     2581 cgccatggcg gtggaactga ccaagctcct gctcggcgcc gccgaatccg ccgagatcgt
     2641 ggtcctacgc ggcgccggcg aggatttctg cgtcggccgc gagaccatgg gcaagcgccc
     2701 gcccggcgcg ccgccggaag cgctggagtt gcgccgccgc aacgacgtga ttttcaactg
     2761 ttacggcgcg ttccgccgct gcgaaatccc cgtgatcggc gtggtgcgcg gacgcgcctt
     2821 cggcttcggc tgcgcgattg ccgcggtctg cgacatcacc ctcgccgccg atacagccaa
     2881 gtttcaagtg ccggaaatgg cgcacaatat aatgcccacc atggtgatgt cggcactggt
     2941 cgatcgcgtg ccgcgcaagg ccatgacata tctcgtctgg tcgaccgcgg tgatcgggcc
     3001 gcagcgggcg cgcgaggccg gcatcgtcag cgaggtcgtt cccccggcgg agctcgacgc
     3061 ggctgtcgag gcgctgtgca agcagatcat ggccgcgccg cggccggctc gcgtcggctg
     3121 caaggattat gcgcgcgctg cactcgacat ggatgtcgcc ggcgcaatcg acttcgcgcg
     3181 cagcatccac gcggtgatca actcatcgag cgaaatgcta ccggcaggcc acaagtagcg
     3241 ggggatcgca gcaacaacgc cttcggaggg tggaaccggc agactgctcc ccttcccctt
     3301 tttctcatcg catgccggcg gcgatgaact tctcgagact cattggatcg cctt
//
LOCUS       DATCWM010000021         2377 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_221590, whole genome shotgun sequence.
ACCESSION   DATCWM010000021 DATCWM010000000
VERSION     DATCWM010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2377
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_221590"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..364)
                     /locus_tag="VIQ50_00385"
     CDS             complement(<1..364)
                     /locus_tag="VIQ50_00385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY9358859.1"
                     /translation="MDTDAVAIVGFITLFALMMLRVPVGMAMGLVGVTGFSYLVNWDA
                     AFKIVGHTSMRTVTDYTFGVIPMFLLMGAFVTNSGMSRELFRAANGFLGHRRGGLGVA
                     TIAACGGFAAISGSSVATA"
     gene            complement(373..921)
                     /locus_tag="VIQ50_00390"
     CDS             complement(373..921)
                     /locus_tag="VIQ50_00390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008974005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HEY9358860.1"
                     /translation="MPATEVNPARGVRRVSRMDRFIDGIELLAAFFVGIVAADIFTSV
                     LLRYFFSVQIPDSYDFGRLLLGILIFWGIAATSYRGTHITVDLLYANVGQKLQRFIDV
                     FATLVLLFVVSVQTWTLFDKVVTTRADNVLTFDLRLPTWPFFLVAWLGDVSAVLLIAV
                     RTYRLIFQPELMGGQYQIKPVE"
     gene            complement(935..1924)
                     /locus_tag="VIQ50_00395"
     CDS             complement(935..1924)
                     /locus_tag="VIQ50_00395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEY9358861.1"
                     /translation="MLLVAASAASAQDKTFELKLSHWVPPTHPLQKAMEEWGASIEKA
                     SNGTIKSKVFPSQQLGKAFDHYDMARDGIADFTYVNPGYQPGRFPIISAGELPFLVGD
                     AKGGIHAVDAWYRKYAPTEMKDVKYCFSFILDPLTWHSSKKKIVVPSDIKGMKVRPSQ
                     ATVAAWVTLLGGTNVQASATEVRDVMEKGVAEAVNFPWGSVPLLGVDKVTKYHMDAPL
                     NTVTFQWLMSPRTYAAMSPAQKKVIDDHCTTEWAGKFADPWADFEHAGLAKVKAEPGH
                     EVYPITGAQLEEWKKSAEPLEKQWIDNVRRAGGDPDTVMKELKQSLAQYKAAY"
     gene            2135..>2377
                     /locus_tag="VIQ50_00400"
     CDS             2135..>2377
                     /locus_tag="VIQ50_00400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9358862.1"
                     /translation="MDDKRDKAADANPALLHKKMLQLLSSLWVTRAVGTFARLGLADV
                     MEEGVADHAAIAAARGLVPDRVYRLLRALSTLGLVTE"
BASE COUNT          444 a          740 c          755 g          438 t
ORIGIN      
        1 ccgcggtcgc gaccgatgaa cccgagatcg cggcaaagcc gccgcaagcc gcgatcgtgg
       61 caacgccgag cccacccctg cgatggccga ggaaaccgtt ggccgcgcgg aacagctcgc
      121 ggctcatgcc ggagttggtg acgaacgctc ccatgagcag gaacatcggg atcacgccga
      181 aggtgtagtc ggtcaccgtg cgcatggagg tatggccgac gatcttgaag gcggcatccc
      241 agttgacgag ataggaaaag ccggtaaccc cgaccaaccc catcgccatg cctaccggca
      301 cgcgcaacat catcaatgcg aacaacgtga tgaagccgac gatggcgacc gcatccgtgt
      361 ccattgccaa gctcactcga cgggcttgat ctgatactgg ccgcccatca attccggctg
      421 gaaaatcagc cggtaggtgc gcacggcgat caggagcacc gcggacacgt cgcccagcca
      481 tgccaccagg aaaaacggcc aggtcggcaa tcgcagatcg aaggtcaaca cattgtcggc
      541 ccgcgtggtg accaccttgt cgaacaaggt ccaggtctga accgagacta cgaacaatag
      601 gacgagggtc gcgaacacgt cgatgaagcg ttgcagtttc tgcccgacat tcgcgtagag
      661 aagatcgacg gtgatgtgag tgccccggta cgacgtcgcg gcgatgcccc agaagatcag
      721 gatgcccaga agcaaccgtc cgaagtcgta gctgtcggga atctgcacgc tgaagaagta
      781 tcgcagcagg accgaggtga agatgtcggc agcgacgatg ccgacgaaga atgccgccag
      841 aagctcgatc ccgtcgatga aacggtccat ccggctgacg cgcctgacgc cgcgcgcggg
      901 atttacctcg gttgcgggca tgatgcctcg cgtgtcagta cgcggccttg tattgagcga
      961 gagactgctt gagctccttc atgacggtgt cgggatcgcc gccggccctt cgcacgttgt
     1021 cgatccattg cttctccagc ggctcggccg acttcttcca ttcctcgagc tgcgcgccag
     1081 tgatcggata gacctcgtgg cccggctcgg ccttcacctt ggccagcccc gcgtgctcga
     1141 aatccgccca tgggtcagcg aatttcccgg cccactcggt ggtgcagtgg tcgtcgatga
     1201 ctttcttctg cgcaggcgac atcgccgcgt aggtgcgcgg gctcatcagc cactggaacg
     1261 tgacggtgtt gagcggcgcg tccatgtgat acttcgtcac tttgtcgacc ccgagcagcg
     1321 gcaccgaacc ccaggggaag ttgacggcct ccgccacgcc tttctccatc acgtcgcgca
     1381 cctcggttgc gctcgcctgc acgttggtgc cgccgagcag cgttacccaa gccgccaccg
     1441 tcgcctgcga gggccgcacc ttcattcctt tgatgtcgga gggcaccacg atcttcttct
     1501 tgctcgagtg ccaggtgagt ggatcgagga tgaaggagaa gcaatatttc acgtccttca
     1561 tttcggtcgg cgcgtatttg cgataccagg cgtcgaccgc gtgaatgccg cccttggcgt
     1621 cgccaaccag gaacggcaat tcgccggcgg agatgatggg aaagcggccc ggctggtagc
     1681 ccggattgac gtaggtgaag tcggcgatgc cgtcgcgcgc catgtcgtag tggtcgaacg
     1741 ccttgccgag ctgctgggac ggaaacacct tggatttgat ggtgccgttc gaggccttct
     1801 cgatcgatgc gccccattcc tccatcgcct tctgcagcgg gtgcgtgggc ggtacccaat
     1861 gcgaaagctt gagctcgaag gttttgtcct gtgccgatgc ggccgatgcg gcgaccagca
     1921 gcattgcggc tgcggcgacg accgtagcaa agaggtgctt gcttcgaccc gttaccatcg
     1981 tctcctcctg tcgaaatcgg cgcccgttga ccggcgtttg cgcggcattg agcccgaagt
     2041 ggccggaact gtaaaggacg gcgcctcgct agcttcgctc gccgaattgg tctatgcggg
     2101 cgtccgccgc gccgcgtgtg gtggaaggga actcgtggac gacaagcgcg ataaggccgc
     2161 cgacgccaat cccgcgttgc tgcacaagaa aatgctgcag ctcctgagca gcctgtgggt
     2221 gacgcgtgcg gttggaacct tcgcacggct cggtctcgcc gacgtgatgg aggagggcgt
     2281 tgccgaccat gcggcaattg ccgcggcgcg cggtctcgtt cccgatcgcg tctaccggct
     2341 gctgcgcgcg ctctccacgt tgggcctggt gacggag
//
LOCUS       DATCWM010000022         2069 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_529272, whole genome shotgun sequence.
ACCESSION   DATCWM010000022 DATCWM010000000
VERSION     DATCWM010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2069
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_529272"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..748
                     /locus_tag="VIQ50_00405"
     CDS             <1..748
                     /locus_tag="VIQ50_00405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011470507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9358863.1"
                     /translation="DKPHPKLPGTIFTAAEEISKAGGNALPLVVDVRDEAQVRSAIEQ
                     AVATFGGLDIIVNNASAIQRTPVVDTDMRRFDLMHQVNARGTFMVSKYAIPHLARADN
                     PHILMNSPPLDMREKWFSGSTAYSIAKYGMSLVVLGLAGELRDKGIAVNALWPRTTIA
                     TAAIKNLLGGERVMRMSRTPEIIADAAYLVFQKPSRSFTGNFLIDDSFLAAEGVTDFE
                     KYRVDAAEPLAPTFFVPDEPPPPPGVSVTG"
     gene            855..1787
                     /locus_tag="VIQ50_00410"
     CDS             855..1787
                     /locus_tag="VIQ50_00410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013169191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HEY9358864.1"
                     /translation="MSTLLITHPACLDHLTPAGHPERPDRLRAIDRTLSHERFRPLAR
                     VEAPAASLETIALCHPMRYVTAIREATPEQGLLGLDADTTLSPGSFEAALRAAGGAVH
                     AVDQIMGGKAANAFVATRPPGHHAETMRPMGFCLFNNAAVAARYAQTKHGIERAAIID
                     FDVHHGNGSQEIFWSDRTVMYGSTHQMPLYPGTGAAGERGEHDTIVNAPLRPGDGGEA
                     FRAAFETVILPRLRDFRPDLIVISAGFDAHMRDPLANLNLVESDFDWVTRKLMEVADA
                     SAGGRLVSVLEGGYDLDGLANSVAAHVAALMQVK"
     gene            1919..>2069
                     /gene="xseB"
                     /locus_tag="VIQ50_00415"
     CDS             1919..>2069
                     /gene="xseB"
                     /locus_tag="VIQ50_00415"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HEY9358865.1"
                     /translation="MADETHSDVKRLPFERAIEELESIVKRLEEGKVPLEESVAIYER
                     GESLKR"
BASE COUNT          370 a          703 c          638 g          358 t
ORIGIN      
        1 cgacaagccg catccgaagc tgccgggcac catcttcacc gccgcagagg agatctccaa
       61 ggccggcggc aacgccctgc cgcttgtcgt cgacgtgcgt gacgaggccc aggtgagaag
      121 cgcgatcgag caggccgtcg cgacgtttgg cggcctcgac atcatcgtca acaacgcaag
      181 cgcaatccag cggacaccgg tcgtcgatac cgatatgcgc cgcttcgatc tgatgcatca
      241 ggtcaatgcg cgcggcactt tcatggtctc gaaatacgcc atcccgcatc ttgcaagggc
      301 ggataatccc cacatcctga tgaattcgcc gccgctcgac atgcgggaaa aatggttctc
      361 cggcagcacg gcctattcga tcgccaagta cggcatgagc ctggtcgtgc tgggtcttgc
      421 cggcgaactg cgcgacaagg gcatcgcggt gaatgcgctg tggccccgta ccaccattgc
      481 caccgcggcc atcaagaacc tgctgggcgg cgagcgggtc atgcgcatgt cgcgcacgcc
      541 cgaaattatc gccgacgcgg cgtacctcgt gttccagaag ccgtcgcgca gctttaccgg
      601 caattttctc atcgacgata gcttcctcgc ggccgagggc gtgaccgatt tcgagaaata
      661 tcgcgtggac gcggccgagc cgctggcgcc gacgttcttc gtgccagatg agcccccgcc
      721 accgcccggc gtcagcgtca ccgggtaaag atgggagtga gcagccgggt gggaactgcg
      781 gccgtgacga tgtgataggc cgctagcgaa cgcctctgct ataaccgacc gcccgcggcc
      841 tcccggatcg tccgatgtcc acgcttctga tcacccatcc cgcttgcctc gaccacctca
      901 cgccggccgg ccatccggaa cgccccgatc ggctgcgcgc gatcgaccgg acgctttccc
      961 acgagcgctt tcgaccgctt gcgcgggtcg aggcgccggc ggcttcgctc gagaccatcg
     1021 cgctctgcca tccgatgcgc tatgtcaccg ccatccgcga ggcgaccccg gaacagggtc
     1081 tgctcgggct tgacgccgat accacgctat cgccgggaag cttcgaggcc gccttacgcg
     1141 cggccggcgg cgcagtgcac gccgtcgacc aaatcatggg aggtaaggcg gcaaacgcct
     1201 tcgtcgccac gcgcccgccc ggccaccatg ccgagacgat gcgtccgatg ggattttgcc
     1261 tcttcaataa tgccgccgtc gccgcccgct atgcgcagac gaaacacggc atcgagcgcg
     1321 cggcgatcat cgatttcgat gtgcatcatg gcaatggctc gcaggagatc ttctggtccg
     1381 accgcaccgt gatgtacggc tcgactcatc agatgccgct ttaccccggc accggcgcgg
     1441 cgggcgagcg tggcgagcac gacaccatcg tcaacgcacc gttgcggccg ggtgacggcg
     1501 gtgaggcgtt ccgtgccgcg ttcgagacgg tgattctgcc ccggttgcgc gatttccggc
     1561 cggacctcat cgtgatctcg gccggctttg acgcccacat gcgcgacccg ctcgccaacc
     1621 tcaacttggt cgaaagcgat ttcgattggg tgacgcgcaa gctcatggag gtagccgacg
     1681 cgagcgctgg aggccgcttg gtctcggtgc tcgaaggcgg ctacgacctc gatggcttag
     1741 ccaactcggt tgccgctcat gtcgccgccc tcatgcaggt caaatagcgg cacaacctgc
     1801 tgcgatcgcc cctaatccca gatcgtttgc agccgccatt cctcgtcacg cggtcagggg
     1861 cagagtggcc cctcttgctg gagtacatta tatagggtgc gactcaccgg aaccgagcat
     1921 ggccgacgag acccattccg acgtcaagcg cctccccttc gagcgggcga tcgaggaact
     1981 cgaatcgatc gtcaagcggc tcgaggaggg caaggtgccg ctcgaggagt cagtcgccat
     2041 ctacgagcgg ggcgaatcgc tcaagcgcc
//
LOCUS       DATCWM010000023         3431 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_453675, whole genome shotgun sequence.
ACCESSION   DATCWM010000023 DATCWM010000000
VERSION     DATCWM010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3431)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3431)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3431
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_453675"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(534..2069)
                     /locus_tag="VIQ50_00420"
     CDS             complement(534..2069)
                     /locus_tag="VIQ50_00420"
                     /inference="COORDINATES: protein motif:HMM:TIGR04393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9358866.1"
                     /translation="MLLGSVWLGALAVFAPNAAQAQTDGTWIGGGAPVSNEWAQGNNW
                     SSAAVPDNTATFTNNGAPTSVTISSPASINTIDFSTAASAYSFTVQSGATFTITGGII
                     NNPGLEPAFTVNVGSALTAGDGAFVEIGSLAGGGRVTIGPSDSSSLLSIVGNSATTFS
                     GQFSGAGSLELDNGASLTLTGASFGGNIGTIGGDLTLCGTCSGGSTLTISGGSLTVNG
                     VSQGVSVESGTLAVINGGTLLVGTTPTPSGSLLVASNMIIDGAGSTVTVAGLTGVGIF
                     GPGTLTISNGGVLNSQIGAEIDFSLFPGTPTVTVTGTGSTWNVGGSFGFGFAVGGGST
                     GGPGALVISNGGTVTSTTFTTIGDSINGTSSVLVTGSGSVLNAFNSLQIGDTSCGCGL
                     VGTLTIADGGVVNSPGATSIGAGSTLNLGISGLAGAIVTPAIANDGQIVANFTDTSTL
                     SANVSGAGALSKAGAGTLIPYYMLILLMNLQNSVVGPRFGPRHYKAFQCPTKSSGLRP
                     RFR"
     gene            2421..2885
                     /locus_tag="VIQ50_00425"
     CDS             2421..2885
                     /locus_tag="VIQ50_00425"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEY9358867.1"
                     /translation="MTQIDSETKPKSKLLFPGLESFYAIAVPLAWPIVRIAVGWNLLV
                     HGWGKVTRGPSAYIRGFVEQGFDPALPWIWGALIIEFVGGIALILGLFTRFFAAAAAV
                     EMLVITVLYWKAGFSLLNRGYEYTLLWGLICFAIALRGGGPYSLDRRIGIEL"
     gene            2903..>3431
                     /locus_tag="VIQ50_00430"
     CDS             2903..>3431
                     /locus_tag="VIQ50_00430"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEY9358868.1"
                     /translation="MEFGIQFFPAVGPDQKPADQYWREALELTQLAEQLGFSNVRTVE
                     HYFLSYGGYSPDPLIFLSAAAALTRSMRLITGAVLPVFNNPLKLAGQIGMVDAISAGR
                     LEVGFARAFLPHEFARFGISMDESRARFEEGLEQVRRLLEEENVTAQGRFHSFENATS
                     LPRPTQKPRPPFWIAA"
BASE COUNT          609 a         1062 c         1115 g          645 t
ORIGIN      
        1 gctgaggtcc atcgacaatg ccccagagga atggggattt agccttggca gcctcgaagg
       61 cattgaaagc ataccggccg tcggcgagac gttcgacgcg cgctacggtc gatggtgaga
      121 ggtagggtgc agcgcatctc aaaaggaagg atattcctgg cccgccgcct tgtttcgtgc
      181 gctgtctaat ctaacgaccg tcatcggcga cgaactgttc cgcggtggga gcagaacggc
      241 cctattcacg ctggccaagt ctcaacccga gaagggcgag gccaccagcg acaatgagtg
      301 ctacccagct caccgacttc ggcactgacc agtccccgat gatgacggtc caccgcataa
      361 aatgcgcacg aagtggaaaa gcgccactac agcgaagatc acgccagaca tcagtgaaaa
      421 tgtttttgcg tcgatgagtg atgctcccga ggccgtaaac tgaggtggcc acgagaaagc
      481 ctgccggagc gaggctcaag tcgcgccctg gaatggaggt tacattagca gtcttacctg
      541 aatcggggcc taaggccact tgatttcgta gggcactgaa atgccttgta gtgtcggggc
      601 ccaaaacggg gcccgactac agaattttgc aagttcatca ataaaatcaa catgtaatac
      661 gggatcagcg ttcccgcgcc ggccttgctc agcgcgccgg cgccggagac gttggcgctg
      721 agcgtcgatg tgtcggtgaa gttggcgacg atctggccgt cgttggcgat cgctggagtc
      781 acgatcgcgc cggcgagccc actgatgccg agattgagcg tgctgcccgc tccgatgctg
      841 gtcgcgccgg gcgaattgac cacgccgccg tcggcaatgg tgagcgttcc gacgaggccg
      901 cagccgcagc tcgtgtcgcc gatctggagc gagttgaacg cgttcaacac cgagccggaa
      961 ccggtgacga gcacgctcga agtgccgttg atcgagtcgc cgatggtcgt gaacgtggtc
     1021 gaggtaacgg tgccgccgtt ggatatgacg agcgcgcccg gaccgccggt gctgccgccg
     1081 ccaaccgcga aaccgaagcc aaacgagccg ccgacgttcc aggtcgagcc cgtcccggtc
     1141 accgtcaccg ttggcgtgcc ggggaaaagg ctgaagtcga tctcggcccc gatctggctg
     1201 ttaagcacgc cgccattgct gatggtgagc gtgcccggac cgaagatgcc gacgccggtc
     1261 aatcccgcca cggtcacggt cgagccggcg ccgtcgataa tcatgttgct ggcgaccagg
     1321 aggcttccgc tgggcgtcgg agtggtaccg accagcagcg tgccgccgtt gatcactgcc
     1381 agggtcccgc tttcaacgct aacgccttgg gagacgccgt tgacggtgag ggagccgccg
     1441 ctgatcgtga gcgtgctgcc gcccgagcag gtgccacaga gggtgagatc acccccgatc
     1501 gtgccgatgt tgccgccgaa gctggcgccg gtcagcgtca gcgaggctcc gttgtcgagc
     1561 tcgagcgagc ccgcgccgga aaactggccg gagaacgtgg tggcgctgtt gccgacgatg
     1621 ctcagtagcg aggacgaatc ggatggtccg atcgtgaccc ggccgccgcc tgccagcgac
     1681 ccgatctcaa caaaggcccc atcgccggcc gtcagggccg agcccacgtt gacggtgaag
     1741 gcaggttcga gtccgggatt gttgatgatg ccgccggtga tggtgaaggt tgcgccgctc
     1801 tgaaccgtga acgaataggc cgacgctgcg gtactgaaat cgatggtgtt gatcgacgcg
     1861 gggctcgaga tggtgaccga ggtgggagca ccgttattgg tgaacgttgc cgtgttgtcc
     1921 ggcaccgctg ctgagctcca gttgttgcct tgggcccatt cgttggaaac gggtgctccg
     1981 ccgccaatcc aggtaccgtc ggtctgagcc tgcgcggcat tcggggcaaa cacagcgagt
     2041 gcgccgagcc acacgctacc gagcaacatc gcccggagcg cctatggtgc ttgcgtcgct
     2101 gcgatcccga ttgagctact acgaccggcg gcgcgcggcg cggttggtgc cgcggcgcgc
     2161 gttgcctgcc aacgcgaccg atatgaacgc atcccccaac ccctgggcgc tcccgccgca
     2221 ctcccgacgc ccccgcgggt gacggataca tggccctgcg gcccacgcta cgggccgacc
     2281 tgagtacgat caattcgtga tggcgcgtct cggcgcggat tgttgctgcc tgtgactttc
     2341 tcgccacgtc ggcgagcccc ttgccactgc accttgtgcc accgtcttat ggtaaacgac
     2401 acggtcaggg aggagagcag gtgacgcaga tcgattccga aaccaagccc aaatccaagc
     2461 tgctgtttcc cgggctcgag tcgttctatg ccatcgccgt tccgctcgct tggccgatcg
     2521 tgcgcatcgc ggtgggctgg aatcttttgg tgcacggctg gggcaaggtc acgcgcgggc
     2581 cttcggctta tatccgtggc ttcgtcgagc agggattcga ccctgcgctc ccttggatct
     2641 ggggcgcgtt gatcatcgaa ttcgtcggcg gcatcgcact catcctcggc ctgttcacgc
     2701 ggttctttgc cgcggcggcc gcggtggaga tgctggtcat cacggtcctt tattggaagg
     2761 ccggattttc gttgctcaac cgcggttacg agtacacgct gttgtggggg ctcatctgct
     2821 ttgccatcgc gctgaggggc ggcggaccct actcgctcga tcgccgcatc ggcatcgagc
     2881 tctgagcaac gacaggtgac cgatggaatt cggcattcag ttctttcccg ccgtcggtcc
     2941 tgaccagaag cccgccgacc agtattggcg cgaggcgctc gagctcaccc aactcgccga
     3001 gcagctgggc ttttccaatg tgcgcacggt cgagcactat ttcctgtcct atggcggcta
     3061 cagtcccgac ccactcatct tcctttccgc cgcggcggca ctgacgcgct ccatgcgtct
     3121 gatcaccggc gcggtgctgc cggtgttcaa caacccgctg aagcttgcgg gccagatcgg
     3181 gatggttgat gcgatttccg ccggccggct ggaggtgggg tttgcccgtg ctttcttgcc
     3241 gcacgagttt gcccgcttcg gcatttcgat ggacgagagc cgagcgcgtt tcgaggaggg
     3301 actcgagcag gtgcgccgct tgctcgagga ggaaaacgtc acggcgcagg ggcgcttcca
     3361 cagcttcgaa aacgccacat cgctgccgcg accgacgcag aagccaaggc cgccgttctg
     3421 gatcgccgcg c
//
LOCUS       DATCWM010000024         2539 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_486097, whole genome shotgun sequence.
ACCESSION   DATCWM010000024 DATCWM010000000
VERSION     DATCWM010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2539)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2539)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2539
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_486097"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..564
                     /locus_tag="VIQ50_00435"
     CDS             <1..564
                     /locus_tag="VIQ50_00435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9358869.1"
                     /translation="RLGRKLPADIRLTQAPPGTELGDMLESGEIDFMMTANNPLAFRR
                     RSHKVRRLFPNYAEVEKDYYRRTKIYPIMHTVVIRNDVYKRDPWVALSMYKALCRAKE
                     YAYHLLADMGSPKVSSAWLQPLIEEEKAIFGSDWYAYGIEPNRPSIEALLQYTHEHGL
                     TDRRVKLEELFAPSTLRDIPLGEGQHV"
     gene            587..2020
                     /locus_tag="VIQ50_00440"
     CDS             587..2020
                     /locus_tag="VIQ50_00440"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEY9358870.1"
                     /translation="MTIPQLMPWIGGPVKFEAGLSPLVCPIDQSVASHMIESDAKVVD
                     AAVKHAHTAFLKHQDATTAKRIEWLLAAADAIDKIESELVRSLIRFIGKPRRAATFEA
                     KRVGTFMRACAAQLPHLMGEVLPLDTTAAGAGRFGFTTRMPYGVVAAVTPFNGPANLL
                     IQKVAPALAVGNAIVVKPSPPGTEVAWLMAQAVKAAGIPDGLFNVVPGGRETAKLLAA
                     HPLVAAVTVTGSTAAGNELARAAGAKKFVGELGSNAANIVCADADLEDAAVRIAGAAF
                     EASGQQCISAQRVIVERTVFERFLELFVAAAKKLKVGDPDDAATDVGPMVSSAAADRI
                     EEMVKDAVAKGAKLVLKPERRGAILGPAIVADAPAQARLMREEAFGPVVVVQNVNDVD
                     AALELANSSEFGLQGACFTTSLETAFKVSRKLRVGSLWINDASRFRLDTYPFGGVGAS
                     GFGREGVRYAMEELSQWRFTGMRLNPQ"
     gene            2028..>2539
                     /locus_tag="VIQ50_00445"
     CDS             2028..>2539
                     /locus_tag="VIQ50_00445"
                     /inference="COORDINATES: protein motif:HMM:NF015412.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate dehydrogenase"
                     /protein_id="HEY9358871.1"
                     /translation="MTAIGLIGCGGMAQDVVAALRAADAASGMRIVGALARPGRSEAA
                     QAKLYGVDILEALDELIARKPSVVAEVASQAAVAEHVGTVLRSGIDCLVISVGALADA
                     TLFAKLKSDARDGNSRILLPAGAIGGLDAIAAMRLSGLTSVRYRSRKPPLAWRGSPAE
                     RQVDLGKVAKR"
BASE COUNT          465 a          828 c          831 g          415 t
ORIGIN      
        1 cggctcggcc gcaagctgcc ggcggacatc cgcctgaccc aagcaccgcc cggcaccgag
       61 ctcggcgata tgctcgagag cggagagatc gacttcatga tgacggccaa caatccgctc
      121 gctttccggc gcagatcaca caaggtgcgc cgcctatttc cgaactatgc cgaggtggag
      181 aaggactact atcggcgcac caagatctat ccgatcatgc acaccgtggt gatccgaaac
      241 gacgtgtaca agcgcgatcc ttgggtggcg ctgagcatgt acaaagcgct ctgccgcgcc
      301 aaggaatacg cctatcacct attggcggac atgggctcgc cgaaggtctc atcggcttgg
      361 ctacagccgc tgatcgagga ggagaaggcg atcttcgggt cggactggta tgcctacggc
      421 atcgagccga accggccgtc catcgaggcg ctgctccagt atacccacga gcacggactg
      481 accgatcgcc gggtcaagct ggaggagctg ttcgctccaa gcacgctgcg cgacattccg
      541 ctgggcgaag gccagcacgt gtgacaaaaa cagaggaggg aaatcgatga ccattcctca
      601 actcatgccg tggatcggtg ggccggtgaa gttcgaagcc ggcctctccc cactcgtgtg
      661 ccccatcgac caaagcgttg cgtcgcacat gatcgaatcc gacgccaagg tcgtggatgc
      721 cgcggtcaag cacgcgcata cggcctttct caagcatcag gatgcaacga ccgccaagcg
      781 aatcgaatgg ctgttggcgg cggcggacgc aatcgacaag atcgaaagcg aactggtccg
      841 ctcactcatt cgtttcatcg gaaagccacg ccgcgccgcg acgttcgaag ccaagcgtgt
      901 gggaacattc atgcgcgcct gcgccgcaca actgccgcat ctcatggggg aagtgctgcc
      961 gctcgacacg acggcggcag gcgcgggccg cttcggcttc acgacgcgca tgccttatgg
     1021 cgtggtcgcc gcggtcacgc cgttcaacgg gcccgccaat ctcctcattc agaaagtcgc
     1081 tccggcgctc gcggtcggca atgcgatcgt ggtcaagccg tccccgcccg gcaccgaggt
     1141 cgcgtggtta atggcgcaag cggtgaaggc ggcgggtata cccgacgggc tcttcaacgt
     1201 cgtccccggc gggcgcgaga ccgccaagct ccttgccgcc catcccctcg tcgcggcggt
     1261 caccgtcacc ggcagtactg ccgccggcaa tgaactggca agagccgcgg gcgccaagaa
     1321 attcgtcggc gagctcggct cgaacgcggc gaatatcgtc tgcgccgatg ccgatctcga
     1381 ggatgccgcg gtgcgcatcg ccggcgcggc attcgaggcg agcggccaac aatgcatctc
     1441 ggcgcagcgg gtgatcgtcg agcggacggt gttcgagcgg tttctcgaat tgttcgtcgc
     1501 ggccgccaaa aagctcaagg tcggcgaccc cgatgatgcc gcgaccgacg tggggccgat
     1561 ggtcagcagc gcggccgccg accggatcga agagatggtc aaggatgcgg ttgccaaagg
     1621 cgccaagctc gtgctcaagc ccgagcgccg cggcgccatt ctcggtcctg caatcgtggc
     1681 agacgcgccg gcgcaagcac ggctcatgcg cgaggaggcg tttggtccgg tcgtcgtcgt
     1741 gcaaaacgtc aacgacgtcg atgccgcgct cgaactcgcg aactcatctg aattcggtct
     1801 ccagggcgcc tgtttcacca cgagcctgga gactgcattc aaggtctccc gcaagctgcg
     1861 ggtcggctcg ctctggatca acgacgccag ccgcttccgg ctcgatacct atcccttcgg
     1921 cggcgtcggc gcgagcggct tcgggcgcga aggcgtgcgc tacgcgatgg aagagctgtc
     1981 gcagtggcgg ttcaccggaa tgcgactcaa cccacagtga tcaagacatg accgccatcg
     2041 gcctgatcgg ctgcggcggc atggcgcagg acgtggttgc cgccctgcgc gccgccgacg
     2101 cggcaagcgg gatgcgcatc gtcggggcgc tggcccggcc cggtcgcagc gaagcggcac
     2161 aggcgaagct ctacggcgtg gacatcctcg aggcgctcga tgagctcatc gcgcgcaagc
     2221 cgagcgttgt tgccgaggtt gcgagccagg cggcggtggc ggagcatgtc ggaactgtgc
     2281 tgcgcagtgg aatcgactgc ctggtcattt ccgtcggtgc gcttgccgat gcgacgctgt
     2341 tcgcgaagct caaatcggac gcacgtgacg gcaacagtcg catcttgttg cccgccggcg
     2401 ccatcggcgg cctcgatgct atcgccgcca tgcgcctatc cggcttgacc tcggtgcgct
     2461 atcgctcgcg caagccgccc ctcgcctggc gcggctcgcc ggcggagcgc caagtggacc
     2521 tcggcaaggt cgcgaaacg
//
LOCUS       DATCWM010000025         5661 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_189176, whole genome shotgun sequence.
ACCESSION   DATCWM010000025 DATCWM010000000
VERSION     DATCWM010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5661
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189176"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..544
                     /locus_tag="VIQ50_00450"
     CDS             <1..544
                     /locus_tag="VIQ50_00450"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HEY9358872.1"
                     /translation="RPVKDVDREFSGSCGEHAWKAMPATQALFAAARRAGVPIIYTTQ
                     HIHSTGVHATNRNSGREADDTYAIKAELAPAPGDLVIYKERASALFGTPLIAHLQQSR
                     IDSLIICGETTSGCVRASTVDAYSYGFHAVVVEECTYDRSLISHKVNLFDLHHKYADV
                     MHVEEVLAHLDARAGGRKVA"
     gene            complement(636..785)
                     /locus_tag="VIQ50_00455"
     CDS             complement(636..785)
                     /locus_tag="VIQ50_00455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9358873.1"
                     /translation="MSLHRLDAKLAGNRRDPVLLYKPGDLYALGIDLEPSRHELGLRE
                     RAGGQ"
     gene            796..1554
                     /locus_tag="VIQ50_00460"
     CDS             796..1554
                     /locus_tag="VIQ50_00460"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEY9358874.1"
                     /translation="MKLEGKVVVVTGAARGIGREYARYLAGLGARVVIADINDCAQTL
                     ELVRSEKGTAISAKLDVASAASAMETARMALEAFGRIDALINNAALFGGLKGGRFDTI
                     SEAEWDAAMAVNVKGIWNCCKAVVPAMRQAGGGSIVNIASLAATYGMPYGLHYTTSKA
                     AVIGLTRGLARELGRDKIRVNAIAPSAVLTEAAREFFGEKAGKALETIKMNQAIARSL
                     VPSDLLGAVHWLISDSSQLVTGQTIAVDGGTVMH"
     gene            complement(1608..2414)
                     /locus_tag="VIQ50_00465"
     CDS             complement(1608..2414)
                     /locus_tag="VIQ50_00465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEY9358875.1"
                     /translation="MDENYARFSRLLIDRPHARVLRVIMNRPDKLNAVDGDMHRELTE
                     IWRVIDADPNVSAVLLTGAGKAFSAGGDLDLLDKMIADFATRSRVWQEARDMVYNLIN
                     CSKPVVSAINGAAVGAGLALALLADVSIAGASARLIDGHTKLGVAAGDHAAIIWPILC
                     GMAKAKYHLLLCEAVTGAEAERIGLVSLAVPDEDLQARAMDVAVRLAEGAPNAIRWTK
                     YALNNWLRAAGPIFDASLGMEFLGFGGREAPEGAAALRQKRAPRFPHAGS"
     gene            2689..3678
                     /locus_tag="VIQ50_00470"
     CDS             2689..3678
                     /locus_tag="VIQ50_00470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEY9358876.1"
                     /translation="MSFNLQMNLCKTLAVCIALLAAPGPAGTREFRVADTQSEDYPTV
                     QALMFMARVVEERSGGRHRIRVFHSRQLGEEKETIEQTRVGAIDLNRTNVAPIGSLIP
                     AANVLALPFLFRSFDHLHKVLDQAIGAEILASAQRHGFVGLAFYDSGSRSIYNNVRPV
                     RTLADMQGLRIRVQQSELMVDMIRALGAQPVELPYGQVATGLSTRLIDGAENNWPSYV
                     TTNHYKLAPYYTLTEHTMGPELLVMSPRAWESLSAEDQDIFRDAARKSSAYMRELWNG
                     LEERSHQQARAAGVTIISDFDRMPFEQAMNTIYAKSVTDPGLSELIERIRKIQ"
     gene            3675..>5661
                     /locus_tag="VIQ50_00475"
     CDS             3675..>5661
                     /locus_tag="VIQ50_00475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011470583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEY9358877.1"
                     /translation="MSLDLLALKEEQSAAPTGRQRRSLDLETQSVVRVLPIRWRLLSI
                     AALNATVAIILAALIWNGANVLSRAWDDVRTVRESDRLLVLLESEASRLQNLIHRYIN
                     QPSQEVLTEILGLHGEVLSTLRNRGAVDPVLSGSADELRAVTERFLQGFGEVRALQTT
                     IAHTYENEVLKPAREMAGLYAIIEGAIGARDALLLPSLGKSREAFTASLVAANAFYLS
                     LASDAADEASRNITTVEQTIPVMIDLAENNLQRTALTALAQRAAAFGDGLKTLAEQFA
                     MRTNLLKTAIDDNQAAMIAVINKLSAQMTLRELQAQGSFDHTLANIYQNVALVAVIFL
                     TLIVVIGALIARSINLPLKEIMAAMHAVVSEKYDQPIQGTQARDEIGEMARAVAVFRE
                     NAIAKRKAEDELRASKDRAEKALEDLREAQQNLIAAEKLAALGGLVAGVAHEVNNPIG
                     ISLTVASSFARRCDEFAKEVGSGPLRRSRLDEFLEGGRDAANQLVSNLQRAGELVQSF
                     KQVAVDRSHADRRPFDLRESTDQIVASLRPVLKKSQITLTVDVPPGINMDSYPGSYGQ
                     VLTNLFLNSVVHAFPDGRAGSVLVEARQVRDDVDIFVSDDGVGMSEEIQRRAFDPFFT
                     TRRGEGGTGLGLHIIFNLVTQQLGGRLAFESRLGWGTR"
BASE COUNT         1060 a         1815 c         1814 g          972 t
ORIGIN      
        1 ccgtccggtg aaggatgtcg atcgcgaatt ctccggctct tgcggcgagc atgcctggaa
       61 ggcgatgccg gcgacccaag ccctgttcgc ggctgcccgc cgcgctggcg tgccgatcat
      121 ctacaccacc cagcacatcc acagcactgg tgtgcatgcc accaaccgca acagcggccg
      181 cgaggcggat gatacctacg ccatcaaggc agagcttgcc ccggcgccgg gtgatctggt
      241 gatctacaag gagcgcgcct cggctctctt cggcacgccg ctaatcgcgc atcttcagca
      301 aagccgcatc gacagcctga tcatatgcgg cgagaccacg tcaggctgcg tgcgcgcctc
      361 gaccgtggat gcctattcct acggcttcca cgccgtagtg gtcgaagaat gcacctacga
      421 ccgctcgctc atcagccaca aggtcaatct gttcgatctg catcacaaat acgccgacgt
      481 catgcatgtc gaggaagtgc tcgcgcatct ggacgcccgc gcgggcgggc gcaaggtcgc
      541 ctgaaggcag gccctctctt ccgtgctgcg cagccgtgga tcgccattgc cgagctcaac
      601 ccggcacgcg ccgcgcgtgg cgtgccggaa tctttctact gacctccggc gcgctcccgc
      661 agaccaagct catgccgact gggctcgaga tcgatgccga gcgcataaag gtcgcccggc
      721 ttgtacagca ggacaggatc gcggcgattg ccggcgagct tggcatcaag tcgatgcaat
      781 gacactgagg caagcatgaa actcgaagga aaggtcgtcg tcgtcaccgg cgccgcgcgc
      841 ggcatcggac gggaatatgc gcgatatctc gccggtctcg gcgcccgtgt tgtgatcgcg
      901 gacatcaatg actgcgcgca gacgctcgag ctcgtgcgta gcgagaaggg cacggcgatc
      961 agcgccaagc tcgacgttgc cagcgcggcc tcggccatgg agacggcgcg catggcgctc
     1021 gaggcgttcg gccgcatcga cgcgctcatc aacaatgcgg cgcttttcgg cggcctcaag
     1081 ggcggccgat tcgacacgat cagcgaagct gagtgggacg ccgcgatggc cgtgaacgtc
     1141 aagggcatct ggaactgctg caaggcggtc gtgcccgcca tgcggcaggc cggcggcggc
     1201 agcatcgtca atatcgcctc gctcgcagcc acctacggca tgccgtacgg cttgcactac
     1261 acgacctcca aggcagccgt aatcgggctc acccgcgggc tcgcgcgcga gcttggtcgc
     1321 gataagatcc gcgtgaacgc catcgcgccg agcgcggtct tgaccgaggc ggcgcgcgaa
     1381 ttcttcggcg agaaggcggg caaggcgctc gagaccatca agatgaacca ggcgatcgcc
     1441 cgaagtctgg tgccctcgga tctgctcggc gccgttcact ggctgatatc cgactcgagt
     1501 cagctggtca caggacagac gatcgcggtg gatggcggaa cggtgatgca ttgagcgggt
     1561 tgcgggagag ccgccgccaa gcaacgcaca acgttcgcca gcacgcttca tgaacccgcg
     1621 tgcggaaatc ttggcgcgcg cttttggcgt aaggccgccg cgccttccgg cgcttcgcgt
     1681 ccgccgaacc cgagaaattc catgccgagt gaggcatcga agatcggtcc ggcggcgcgc
     1741 agccagttat tgagcgcgta cttggtccag cgaatcgcgt tgggcgcacc ctcggcgagg
     1801 cgaaccgcga cgtccatggc gcgtgcctgc aggtcctcgt cgggcactgc gagcgagacg
     1861 agaccgatgc gctcggcctc ggcgccagtg accgcctcgc acagcagcag atgatatttg
     1921 gccttggcca tgccgcagag aatcggccag atgatcgccg cgtgatcgcc ggcagcgacg
     1981 ccgagcttgg tatgcccgtc gatgaggcgg gccgacgcgc cggcgatgga gacgtcggcg
     2041 agaagagcca gcgccaggcc ggcgcccacc gccgcgccgt tgatcgcaga gaccaccggc
     2101 ttgctgcagt tgatcaggtt gtagaccatg tcgcgcgctt cctgccaaac gcggctgcgg
     2161 gtggcgaaat ccgcaatcat cttgtccagc aagtcgagat cgccgccggc cgagaaggcc
     2221 ttgcccgcgc cggtgagcaa gacggcgctc acgttcgggt cggcatcgat aacgcgccag
     2281 atctcggtca gctcgcggtg catgtcgccg tcgaccgcat tgagcttgtc cggcctgttc
     2341 atgatgacgc ggagcacccg cgcgtgcggc cgatcgatca gcagccgcga aaagcgtgca
     2401 taattttcat ccatcgctcg ttctcccggt cgtcgcgcat cgcgctgttg gcagcgctcg
     2461 gttagaatgc gttgctatca agtcagcaac catgggcgcc cgcggaggtg aactccagcg
     2521 ggactgcagg tctgagcttt ggcccgacgt cttgcgtgtc ggggacggcc cttgtgggaa
     2581 cgtgtccggc gaaccgaggt atagcagggc ggcccgtcga ttgacgggct tcgcccgaac
     2641 cgaataatac tctcgatcgc cgttcgtctg cttcaaccgg gacgggtcat gtccttcaat
     2701 ttgcaaatga atttgtgcaa gacgctagcc gtctgcattg cgctcttggc ggcgcctggc
     2761 cctgcgggca cgcgcgagtt ccgcgtcgcc gacacccaat cggaggacta tcccaccgtg
     2821 caggcgctta tgttcatggc tcgcgtcgtc gaggagcgca gcggcggacg ccaccgcatt
     2881 cgggtgttcc attcgcgcca actcggcgaa gaaaaagaga ccatcgaaca gacgcgcgtc
     2941 ggagccatcg atctcaaccg caccaatgtc gcgccgatcg gatcgctcat tccggcggcg
     3001 aacgtgcttg cgctgccgtt tctgttccgc tcgttcgatc atctgcacaa agtgctcgat
     3061 caggcgatcg gcgcggagat cctggcgagc gcgcagcgcc atggtttcgt cggcttggcg
     3121 ttttacgact cgggatcgcg gtcgatctac aacaacgtgc ggccggtgcg cacgcttgcc
     3181 gacatgcaag gtttgcgaat tcgggtgcag caatcggaac tgatggtcga catgatcagg
     3241 gcgctcggcg cccaaccagt cgagctaccg tacgggcagg tcgcgaccgg gctctccacc
     3301 cgattgatcg acggcgcgga aaacaactgg ccgtcctacg tcacgacgaa ccactacaag
     3361 ctcgctccct attacacgct gacggagcac acgatgggac ccgagctgct tgtcatgtcc
     3421 ccgcgagcgt gggaaagcct ttcggcggaa gaccaggaca tcttccggga cgcagcgcgc
     3481 aagtccagcg catacatgcg cgagctgtgg aacggattgg aggagcgctc gcatcagcag
     3541 gcgcgggctg ccggcgtcac catcatcagc gatttcgacc gaatgccgtt cgagcaggcg
     3601 atgaacacga tctacgcaaa gagcgtcact gatccgggcc tgagcgaatt gatcgagcgt
     3661 attcgcaaga ttcaatgagt ttggatttgc ttgctcttaa ggaggaacaa tcggcggcgc
     3721 cgaccgggcg gcagcggcgg agccttgacc tggagacgca gagcgtcgtg cgggtgctgc
     3781 cgatccggtg gcgtctgtta tcgatcgccg cgctcaacgc gacggttgcc atcattctgg
     3841 cggcgctgat ctggaatggc gccaatgttc tcagccgcgc gtgggacgac gtgcgtaccg
     3901 tgcgagaatc cgacaggctc ttggtgctgc tggaaagcga agcgagccgt ctgcaaaacc
     3961 tgatccatcg ctacatcaac cagccgagcc aggaagtcct cacggaaatt ctgggactac
     4021 atggggaggt tctgagcacg ctgcgcaacc gcggcgccgt ggatccggtt ttgtcgggat
     4081 ccgcggacga gctgcgcgcc gtgaccgagc ggtttctgca aggctttggc gaggtccgcg
     4141 cgctccagac cacgatcgct cacacctacg agaatgaagt gctcaagccg gcaagggaaa
     4201 tggcgggtct ctatgccatc atcgagggcg ccatcggcgc gcgcgacgcg ctgctgctgc
     4261 cttcgcttgg aaagtcgcgc gaggcgttca ccgccagtct cgtcgccgcc aacgcctttt
     4321 acctgtcgct cgcttctgat gccgccgacg aagcgagcag gaacatcacc accgtcgaac
     4381 agacgatccc ggtgatgatt gaccttgcgg aaaacaacct gcagcgcacc gcgctgactg
     4441 cgctggccca acgcgccgct gcgttcggcg acggattgaa gacgttggcc gagcagttcg
     4501 ccatgcgcac caacttgctg aagaccgcga tcgacgacaa tcaggcggcc atgatcgcgg
     4561 ttatcaacaa gctctcggcg cagatgaccc tgcgcgagct gcaggcgcag ggaagcttcg
     4621 accacacgct ggccaatatc tatcagaacg tggcgctcgt cgcggtcatt tttctgacgc
     4681 tgatcgtcgt tatcggggct ctgatcgccc gcagcatcaa cctaccgctc aaggagatca
     4741 tggctgcgat gcacgccgtc gtatcggaga aatacgacca gcccattcaa ggaacgcagg
     4801 cgcgcgacga gatcggagaa atggcacgcg cggttgccgt gtttcgcgag aacgctattg
     4861 ccaagcgcaa ggccgaggac gaactgcgcg cctcgaagga tcgcgcggag aaagcgctcg
     4921 aggacctgcg cgaggcgcag caaaacctca tcgccgcgga gaagctcgca gcgctcggcg
     4981 ggctcgttgc cggcgtggcg cacgaggtga acaacccgat cggcatcagc ctcacggtgg
     5041 cctcgagctt cgcccgcagg tgcgacgagt tcgccaagga ggtcggctcg ggcccgctgc
     5101 ggcgctctcg cctcgacgag ttcctcgaag gcggccgcga cgccgccaac caactggtca
     5161 gcaacctcca gcgcgcgggc gaactcgtgc aatcgttcaa gcaggtcgcc gtcgaccgca
     5221 gccacgccga tcggcgcccg ttcgatctgc gcgaatcgac cgatcagatc gtcgccagcc
     5281 tgcggccggt gctgaagaag tcgcagatca cgctgaccgt cgatgtgccg ccgggcatca
     5341 acatggacag ctatcccggc tcctacgggc aggtgctgac caacctgttc ctcaacagcg
     5401 tcgtgcatgc ttttcccgac gggcgcgccg gcagcgtcct cgtcgaagcg aggcaagtcc
     5461 gcgacgacgt cgatatcttc gtgtccgacg acggcgtagg catgagcgag gagatccagc
     5521 gtcgcgcctt cgacccattc ttcacgacgc gtcgcgggga aggcggaacc ggacttggct
     5581 tgcacatcat cttcaacctt gtgacccagc agctcggcgg ccgactggct ttcgaatcgc
     5641 ggctcggctg gggcacgcgg t
//
LOCUS       DATCWM010000026         2252 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_281026, whole genome shotgun sequence.
ACCESSION   DATCWM010000026 DATCWM010000000
VERSION     DATCWM010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2252
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_281026"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..595)
                     /locus_tag="VIQ50_00480"
     CDS             complement(<1..595)
                     /locus_tag="VIQ50_00480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020188235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9358878.1"
                     /translation="MLRMLAKRMLIAVPSLVGVVIVTFLLTRALPGDPAAYFAGPAAT
                     KEAIEQIRVKLGLDKPLYLQFIHYVSDLARGDLGNSLTTGQPVAHEIKTRLPASAELT
                     LLGLIVSMAIAVPLGILAATRPNSLVDHLCRVISTAGVSLPVFFTGLILIYVFYYLLG
                     WAPAPLGRLDVFFSPPPHVTGFYLVDSLIAGDGEVFFA"
     gene            complement(712..>2252)
                     /locus_tag="VIQ50_00485"
     CDS             complement(712..>2252)
                     /locus_tag="VIQ50_00485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008142893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9358879.1"
                     /translation="AKAQSRQETLLIVSESGPNNLDIHGVGTNVPGYEVSWNCYDRLI
                     SHEMKTLPNGAQYYERDKFKLELADDMNIGDMSVTFKLKKNAVFQEGTPVTAKDVKWS
                     LDRAVTVGGFPTFQMGAGSLTKPEQFVVVDDNTIRVDFLRKDRLTVPDLAVIVPAIYN
                     SELVKKHASEKDPWGLEYAKQNTAGSGAYRVVSWNAGSEVILERNDKWIGGPPPKVRR
                     IVWRMVPSAGNRRALLERGDADISYDLPNKDFVELKDSGKLTIVSTPYSNGIQYIGMN
                     VKTPPFDNLKVRQAVAYAIPYQKIMDAVLFGLAAPMFGAAADAPTAVAWPQPHKYNTD
                     IAKAKAMLAEAGYPNGFETTLSFDLGFAGVNEPLCVLTQESLAQIGIKCTINKIPGAT
                     WRTELNKKVLPLYTNVFSGWLDYPEYFFIWCYHGKNSIFNTMSYQSKELDALIDGAVT
                     AAAEGDKAAYEKDVKGFVDLAYADMPRIPLYQPFVNVAMQKNVSGYQYWFHRRLDYRA
                     LVKG"
BASE COUNT          406 a          669 c          755 g          422 t
ORIGIN      
        1 tggcgaagaa cacctcgcca tcgcccgcga tcaggctgtc gacgagatag aagccggtca
       61 cgtgcggcgg cgggctgaag aagacgtcga ggcgcccgag cggggccggc gcccagccga
      121 ggagatagta gaagacgtag atcaggatca gcccagtgaa gaatactggc agcgacacgc
      181 ccgcggtgga gatcacgcgg cagagatgat cgacgagcga gttcggccgc gtcgccgcaa
      241 gaattccaag cggcacggcg atcgccatgg atacgatgag cccgagcaag gtgagctcgg
      301 cggacgcggg taggcgcgtc ttgatctcgt gggcgaccgg ctggccggtg gtgagcgaat
      361 tgccgaggtc accgcgggcc agatcgctga cgtagtggat gaactggagg tagagcggct
      421 tgtcgagccc gagcttcacg cggatctgct cgatcgcttc cttggtggcc gcgggtccgg
      481 cgaaataggc cgcgggatcg cccggcagcg cccgcgtcag caggaacgtg acgatcacca
      541 cgccgacgag gctcggcacg gcgatcaaca tgcgtttggc aagcattctc agcatggcgg
      601 ccggcggcgg attcccgaat taaacgtagg ccgagcagcg gactcggtgg actccctctc
      661 gccgccgggg agagggagcg caccgaatac gcggcacgac atccgatagt ctcatccctt
      721 caccagcgcg cggtagtcga gccggcgatg gaaccagtat tggtagcccg acacgttctt
      781 ctgcatcgcg acgttgacga acggctgata cagcgggatg cgcggcatgt cggcgtaggc
      841 gagatcgacg aagcccttga cgtccttctc gtaggccgcc ttgtcgccct cggccgccgc
      901 ggtcacggcg ccgtcgatca aggcatcgag ctccttcgac tggtagctca tggtgttgaa
      961 gatcgaattc ttgccgtgat agcaccagat gaagaagtac tcgggataat cgagccagcc
     1021 cgagaacacg ttggtgtaga gcggcagcac cttcttgttg agctcagtgc gccaagtcgc
     1081 gccgggaatc ttgttgatcg tgcacttgat gccgatctgg gcgaggctct cctgggtgag
     1141 cacgcagagc ggctcgttca cgccggcaaa gccgaggtcg aacgacagcg tggtctcgaa
     1201 accgttgggg tatccggcct cggcaagcat cgctttggcc ttggcgatgt cggtgttgta
     1261 cttgtgcggc tgcggccagg cgaccgccgt cggcgcgtcc gccgcggcgc cgaacatcgg
     1321 cgcggcaagg ccgaacagca ccgcatccat gatcttctga tagggaatgg cgtaggcgac
     1381 ggcttggcgc accttcaaat tgtcgaacgg cggcgtcttc acgttcatgc cgatgtactg
     1441 gatgccgttg gaatagggcg tcgacacgat ggtgagcttg cccgagtctt ttagctcgac
     1501 gaaatctttg ttcggcaggt cgtaggaaat gtcggcatcg ccgcgctcga gtagcgcgcg
     1561 gcggttgccg gcggacggca ccatgcgcca gacgatgcgt ctgaccttcg gcggcggtcc
     1621 gccgatccat ttgtcgttgc gctcgaggat cacctcgctg ccggcgttcc agctcaccac
     1681 ccgataggcg ccactgccgg cggtgttctg cttggcatat tcgaggcccc agggatcctt
     1741 ttcgctggcg tgcttcttga cgagctcgga gttgtagatc gccggcacga ttaccgcgag
     1801 atcagggacc gtgaggcgat ccttgcgcag gaaatcgacg cggatggtat tgtcgtcgac
     1861 cacgacgaac tgctctggct tggtcaacga gcccgcgccc atctggaacg tgggaaaccc
     1921 gccgacggtg accgcccgat cgagcgacca cttgacgtct ttcgccgtaa ccggcgtgcc
     1981 ctcctggaac accgcattct tcttgagctt gaaggtgacc gacatgtcgc cgatgttcat
     2041 gtcgtcggcg agctcgagct tgaacttgtc gcgctcgtag tattgcgcgc cgttgggcag
     2101 cgtcttcatc tcgtggctga tgagccggtc gtagcaattc cacgacacct cgtagcccgg
     2161 cacgttggtg cccacgccat ggatgtcgag attgttgggg ccgctctcgg agacgatgag
     2221 cagcgtctcc tggcgcgact gcgccttggc gg
//
LOCUS       DATCWM010000027         2105 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_216197, whole genome shotgun sequence.
ACCESSION   DATCWM010000027 DATCWM010000000
VERSION     DATCWM010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2105)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2105)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2105
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_216197"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..587
                     /locus_tag="VIQ50_00490"
     CDS             <1..587
                     /locus_tag="VIQ50_00490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY9358880.1"
                     /translation="DMFAFLADGPRAHGIDVAVVGYTLAPEARLTDIVEEIRRALSVL
                     WERADDLGFDRDRLFVGGWSAGGHLTAIVSGHPAFRGGLPISGIFDLEPIALNYLNER
                     LALDAREVATLSPLRVLRERSAPLRLFVGSDELPELRRQSAIYAETARERGLPVALTV
                     LPARHHYSILDELSRPEGAIARALVELTETCKMD"
     gene            633..1679
                     /locus_tag="VIQ50_00495"
     CDS             633..1679
                     /locus_tag="VIQ50_00495"
                     /inference="COORDINATES: protein motif:HMM:NF039236.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEY9358881.1"
                     /translation="MFLRNYWYVAAYDREITGRPLGRTILGEPIVFYRLEDGTPVALE
                     DRCAHRHLPLSMGTLVGDTLQCLYHGLRYDKTGTCVRVPGQDTIPRSARVRSYPVVER
                     YHWLWIWMGDPARADPDKITDFHWFDDPNWGAKGEYLHVKGNWQLVVDNLLDLTHLAF
                     VHGTTIGNPALVEQARVKVQRSGEDITVTRWIIDAPPPPTFVKAGGFTGNVDRWQIIN
                     FTPPAFLRLDVGATPTGTGAPEGKRVGGIGMWNLNAITPETETTSHYFWGQAHNFDTA
                     NPKTTDMLIEQIRTAFLEDVGVFEAQQRNLLLMPNPPQTDINADAGVIQARRILDRLY
                     QEEQAAAGKMAAAE"
     gene            complement(1717..>2105)
                     /locus_tag="VIQ50_00500"
     CDS             complement(1717..>2105)
                     /locus_tag="VIQ50_00500"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9358882.1"
                     /translation="GSTPIALIGEGNVIGQIRAGTMTPLVMLNNIRSPNFPAVPTLAE
                     TGYTGPPSRGWYGLFTPAGTAKPIVDKLAKEVAGILDDPAFRARHLSARSLVPAANTP
                     EEFAAEIRNDRALAQQVVKAAGLEPQ"
BASE COUNT          371 a          704 c          669 g          361 t
ORIGIN      
        1 aggacatgtt cgccttcctc gccgatggac cgcgcgccca cgggatcgac gtcgccgtcg
       61 tcggctacac gctcgcacca gaagcgcgcc tcaccgacat cgtcgaagaa attcgtcgcg
      121 cgctcagcgt cctctgggaa cgggccgatg atctcggatt cgaccgcgat cggctattcg
      181 tcggaggatg gtcggcgggt ggacatctca ccgccatcgt atcgggccac ccggcgttcc
      241 gcggcgggct tcccatcagc ggcatcttcg atctcgaacc gattgcgctc aattatctca
      301 acgaaaggct cgccctcgat gcgcgcgagg tcgcaacgct ctcgccactt cgcgtgctgc
      361 gcgagcgttc ggcgccgctg cggctgttcg tcgggagcga cgaactaccg gagctcaggc
      421 ggcaatccgc gatctacgcc gaaacggcac gcgaacgcgg cctgccggtt gcgctcaccg
      481 tcctgccggc gcgccatcac tattcgatac ttgacgagct ttccaggcct gagggcgcga
      541 tcgcacgcgc cctggtggag ttgacggaaa cctgtaagat ggattgatcg caaagaagtc
      601 atagacgcct tccgcggcgg gaggaaattc tcatgttcct tagaaactac tggtacgtcg
      661 ccgcctacga ccgcgagatc accgggcgtc cgctcggccg caccattctc ggcgagccca
      721 tcgttttcta ccgcttggaa gacggcacgc cggtcgcgct cgaggaccgc tgcgcgcatc
      781 gccatctgcc gctctccatg ggcacattgg tcggcgacac gctgcagtgc ctctaccacg
      841 ggcttcgcta cgacaagacc ggcacttgcg tgcgggtgcc gggccaggac acgattccgc
      901 gctcggcgcg ggtcaggagc tatccggtgg tcgagcgcta tcactggctg tggatctgga
      961 tgggcgaccc cgcgcgcgcc gaccctgaca agatcaccga tttccactgg ttcgacgatc
     1021 ccaactgggg agccaagggc gagtatctcc acgtcaaggg caattggcag ctcgtggtcg
     1081 acaacctcct cgacctcacg cacctcgcct tcgtgcacgg gaccacgatc ggcaatccgg
     1141 cgctggtgga acaggcgcga gtgaaagtgc agcgctctgg cgaagacatc acggtcacgc
     1201 gatggatcat cgatgcgccg ccgccgccga ccttcgtgaa agcgggcggc ttcaccggca
     1261 acgtggatcg ctggcagatc atcaatttca ctccgccggc gttcctgcgg ctcgacgtcg
     1321 gtgccacgcc gaccggcacc ggggcgccgg aaggcaagcg cgtcggcggc atcggcatgt
     1381 ggaacctcaa tgccatcacg ccggaaacgg aaaccacgag ccattatttc tgggggcagg
     1441 cgcacaactt cgacaccgcc aacccgaaga cgaccgacat gctgatcgag cagatcagga
     1501 ccgcctttct cgaggatgtc ggggtgttcg aagcgcagca gcgcaacctc ttgctgatgc
     1561 ccaacccgcc gcagaccgat atcaatgcgg atgccggagt gatccaggcg cgccgcattc
     1621 tcgatcgcct ctatcaggaa gagcaggcgg cagccggcaa gatggcggcg gcggagtagc
     1681 gatacggctc aatcgaaacg ccgctctcgc cacgggtcat tgcggctcta agcccgcggc
     1741 cttcaccacc tgttgcgcca gcgcgcggtc gttcctgatt tcggcggcga attcctccgg
     1801 cgtgttggcc gctggcacta ggctgcgcgc gctgagatgg cgggcgcgga acgccggatc
     1861 atcgaggatg ccggcgacct ctttggcgag cttgtcgacg atcggcttcg ccgtgccggc
     1921 cggcgtgaac aggccatacc agccgcgcga cggcggcccc gtgtagccgg tctccgccaa
     1981 cgtcggcacg gccgggaaat tcggcgagcg gatgttgttc agcatgacca gcggcgtcat
     2041 cgtgccggcg cgaatctgcc cgatgacgtt gccttcgccg atcagcgcga tcggcgtgga
     2101 gccgc
//
LOCUS       DATCWM010000028         3695 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_281045, whole genome shotgun sequence.
ACCESSION   DATCWM010000028 DATCWM010000000
VERSION     DATCWM010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3695
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_281045"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..419
                     /locus_tag="VIQ50_00505"
     CDS             <1..419
                     /locus_tag="VIQ50_00505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971144.1"
                     /note="catalyzes the thiolytic cleavage of
                     beta-ketoadipyl-CoA to succinate and acetyl-CoA; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="3-oxoadipyl-CoA thiolase"
                     /protein_id="HEY9358883.1"
                     /translation="ILASQAAAKRHGFTPRARVLGMASAAVPPRVMGIGPVPSTRKLM
                     ARLGLKMGDFDLIEINEAFASQGLACLRQLGVADAAEHVNPHGGAIALGHPLGMSGAR
                     LALTAVHGLEKRGGKLALATMCVGVGQGVSLALERI"
     gene            449..1318
                     /locus_tag="VIQ50_00510"
     CDS             449..1318
                     /locus_tag="VIQ50_00510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9358884.1"
                     /translation="MSPGYIPFHPNPSKPKYVPPPGAVDAHCHVFGPESKFPYAPERK
                     YTPCDAPKEKLFALRDFLGFDKNVIVQASCHAKDNRALIDALASSAGKAKGVAFVGEE
                     ITDAELKAMDSAGVRGVRFNFVRRLVDFTPREMLDRIAARVAPLGWHIVVYFEMTDLG
                     ELEDFFTSLPTTVVVDHMGTPNVGKGVDHPENQRFHRLMERHGNFWVKTTCPERMTLA
                     GPPYDDVVPFAQRLIETFPDRVIWGTDWPHPNMKKEAPDDGALVDFIPRIAPSAAAQK
                     ALLVDNPMRLYWS"
     gene            1480..1926
                     /gene="ligA"
                     /locus_tag="VIQ50_00515"
     CDS             1480..1926
                     /gene="ligA"
                     /locus_tag="VIQ50_00515"
                     /EC_number="1.13.11.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018579 - protocatechuate 4,5-dioxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0046278 - 3,4-dihydroxybenzoate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protocatechuate 4,5-dioxygenase subunit alpha"
                     /protein_id="HEY9358885.1"
                     /translation="MARAQHDYDDIPGTFVFDAERSRQGYGINMFCMSLMKDENRKAF
                     KANEAEYLKKFKLTPAQTDAILKRDYNRMLELGGNIYFTAKLGATDGHSFQHLAALMT
                     GSSQQDYAAMMLAGGRSVEGNRSKSGKQRPAKAKAKSKSKPSAKRK"
     gene            1930..2868
                     /locus_tag="VIQ50_00520"
     CDS             1930..2868
                     /locus_tag="VIQ50_00520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class III extradiol dioxygenase subunit beta"
                     /protein_id="HEY9358886.1"
                     /translation="MASIIAGVGSSHVPAIGAALDNGRTEEPYWKRVFSGFEKSKQWM
                     AQTKPDVAIVVYNDHASAFSVEMIPTFALGCAAEFPPADEGWGPRPVPVLKGHPELAA
                     HIAQSVILDEFDLTIVNKMEVDHGLTVPMNLLFGTPKEWPCRIIPLAVNVVVYPPPTG
                     HRCYMLGKAIRKAVESYPEDLKVVIFGTGGLSHQISGPRAGLINSKWDKSFLDNLTKD
                     PKKLTRIPHIEYMREAGAEGIEMVMWLIMRGALDDKVDEVYRFYTVPASNTAVGHIIL
                     ENRRKAAAKNKRVSAGRSKQAAARKAAHRIASKGRR"
     gene            2865..>3695
                     /locus_tag="VIQ50_00525"
     CDS             2865..>3695
                     /locus_tag="VIQ50_00525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEY9358887.1"
                     /translation="MKICVAGQGAFGQKHLDALKRIPGVEVSSLVGGNQDATAEVAKK
                     YGIPHYTGDLSEGIKRADAVILTTPTKLHFRQGEQVMRAGKHVLVEIPITDSVEDAEQ
                     LVKIAKEVGVIAMGGHVRRFNPSHQWIHKRIEKGELKIQQMDVQTYFFRRRNINAAGN
                     PRSWTDHLLWHHAAHTIDLFQYQAGETISDCYAVQGPIHPQLGIAMDMGIVAKVPSGA
                     ILTLSLSFNNDGPLGSFFRYICDNGTYKAFYDDLSDGKDNKIDVSKVDVSMDGIELED
                     R"
BASE COUNT          737 a         1198 c         1144 g          616 t
ORIGIN      
        1 tcatccttgc ctcgcaagcg gcggccaagc gccacgggtt cacgccgcgc gcgcgtgtgc
       61 tcggcatggc ctctgccgcg gtgccgccgc gggtgatggg gattggtccg gtgccctcga
      121 ctcgcaagct gatggcgcgg ctcggcttga agatgggcga tttcgatctg atcgagatca
      181 acgaggcttt cgcctcgcaa gggctcgcct gcctgcgcca gctcggcgtc gccgatgccg
      241 ctgagcacgt caatccgcac ggcggggcga tcgcgctggg gcacccgctg ggcatgtcgg
      301 gggcgcggct cgccttgacc gcggtgcacg gattggaaaa gcgcggcggc aagctcgcgc
      361 tcgcgaccat gtgcgtgggc gtcggccaag gcgtttcgct cgccctcgag cggatttgaa
      421 gagcggcgaa ggaacacgcc ccgtgtcgat gagtccaggc tatatccctt ttcatcccaa
      481 tccatcgaag ccgaaatacg tcccgccgcc gggcgccgtc gatgcgcact gccacgtgtt
      541 cggtccggaa agcaaatttc cctacgcgcc cgagcgcaaa tacacgcctt gcgacgcgcc
      601 caaggaaaag ctgttcgcgc tacgcgactt tctcggcttc gacaagaacg tgatcgttca
      661 agcgtcttgc cacgccaagg acaatcgcgc gctgatcgat gcgctcgcga gctccgcggg
      721 caaggccaag ggcgtcgcct tcgtcgggga agagatcacc gatgccgagc tcaaggcgat
      781 ggatagcgcc ggcgtgcgcg gcgtgcgatt caacttcgtc cggcgcctgg tcgacttcac
      841 cccgcgcgag atgctcgacc gcattgccgc gcgcgtcgcg ccgctcggct ggcacatcgt
      901 cgtctatttc gagatgacgg atttggggga actagaggac ttcttcacct cgctgccgac
      961 cacggtggtc gtcgaccaca tgggtacgcc caatgtgggc aagggggtcg accatccgga
     1021 gaaccagcgc ttccatcgcc tgatggaacg gcacggcaat ttctgggtca agaccacctg
     1081 tccggagcgc atgactcttg ccgggccccc ttatgacgac gtggtgccct tcgcccagcg
     1141 cctcatcgag accttccccg accgcgtcat ctggggcacc gactggccgc accccaacat
     1201 gaagaaggag gcgcccgacg acggcgcgtt ggtcgacttc atcccgcgca tcgcgccgag
     1261 cgctgcggcg caaaaggcgc tgctggtcga caatccgatg cggctttatt ggagctgaaa
     1321 gcgttctaag gtgggatacg cgggcgcggc ttgactcgcc cgcagccgcg aggacagcat
     1381 tcgttgccgc aaggttctgc gctataaaag ctctacgcta tatatgtcag cccgcaaccg
     1441 tgggaaacga tcggtcgagc ggcaggatgg aggaggccca tggcccgcgc gcagcatgac
     1501 tatgacgaca tccccggcac cttcgtgttc gacgccgagc gctcgcgcca gggctacggc
     1561 atcaacatgt tctgcatgtc gttgatgaag gatgagaacc gcaaggcctt caaggcgaac
     1621 gaggcggaat atctcaagaa gttcaaactg accccggcgc agaccgacgc cattctcaag
     1681 cgcgactaca accggatgct ggagctcggc ggcaacatct atttcactgc caagctcggc
     1741 gcgaccgatg gccattcgtt ccagcatctc gccgcgctca tgaccggctc ctcgcagcag
     1801 gactatgccg cgatgatgct cgcgggcggg cgctcggtgg aaggcaatcg cagcaagtcg
     1861 ggcaagcaaa ggcctgccaa agcgaaggcc aaatccaaat ccaaaccctc agcaaagcgg
     1921 aagtgagccg tggcaagcat catcgcaggt gtaggttcgt cgcacgtgcc cgccatcggc
     1981 gcggcgctcg acaacggaag gaccgaggag ccctactgga aacgggtgtt ctctggcttc
     2041 gagaaatcca agcaatggat ggcgcagacc aagccggacg tcgccatcgt ggtctacaat
     2101 gaccacgcct ccgccttctc ggtggagatg atcccgactt tcgcgctcgg ctgtgcggcg
     2161 gaatttcctc ctgccgacga aggctggggg ccgcggccgg tgccggtgct caagggccat
     2221 cccgagctcg ccgcccacat cgcgcaatcc gtcattctcg acgaattcga tctcaccatc
     2281 gtcaataaga tggaagtgga tcacggcctg acggtgccga tgaacctgtt gttcggcacg
     2341 ccgaaggaat ggccctgccg catcatcccg ctcgcggtca acgtcgtcgt gtatccgccg
     2401 ccgaccggcc atcgctgcta catgctgggc aaggcgatcc gcaaggcggt cgagtcctat
     2461 ccggaagatc tgaaggtcgt catcttcggc accggcggct tgtcgcatca gatcagcggt
     2521 ccgcgcgccg ggctcatcaa cagcaaatgg gacaagagct tcctcgacaa cctcaccaag
     2581 gaccccaaga agcttacccg catcccgcac atcgagtaca tgcgcgaggc cggcgctgag
     2641 ggcatcgaga tggtgatgtg gctgatcatg cgcggcgcgc tcgatgacaa ggtggacgag
     2701 gtgtaccgct tctacaccgt gccagcatcg aacaccgcgg tcgggcacat cattctggag
     2761 aaccggcgca aggccgcggc caagaacaag cgcgtctccg ccgggaggag caagcaggcg
     2821 gccgcccgca aagccgcgca ccgcatcgcc agcaagggac gacgatgaag atctgtgtcg
     2881 ccggtcaagg cgcgttcggc caaaagcacc tcgacgcgct caagcgcata cccggggtcg
     2941 aggtgagctc gctggtgggg ggcaatcagg acgccaccgc cgaagtcgcc aagaaatatg
     3001 gcatcccgca ttacaccggc gacctttccg agggcatcaa gcgcgccgac gcggtaatcc
     3061 tgaccacgcc gacgaagctg cacttccggc agggcgaaca ggtgatgcgc gcgggcaagc
     3121 acgtgttggt tgaaatcccg atcaccgaca gcgtcgaaga cgccgaacag ctggtcaaga
     3181 tcgccaagga ggtgggcgtc atcgccatgg gcgggcacgt tcgccgcttc aatcctagcc
     3241 atcagtggat ccacaagcgt atcgagaagg gcgagctcaa gatccagcag atggacgtgc
     3301 agacctattt cttccgccgc aggaacatca acgcggcggg caatccgcgc agctggaccg
     3361 atcatctgct ctggcatcac gccgcccaca ccatcgacct gttccagtac caggccggag
     3421 agacgatttc cgattgctac gcggtgcagg gcccgatcca cccacagctc ggcatcgcca
     3481 tggacatggg gatcgtggcc aaagttccct cgggcgcgat cctcacgctc tcgctgtcgt
     3541 tcaacaacga cggtccgctc ggctcgttct tccgctacat ctgcgacaac ggcacctaca
     3601 aggccttcta cgacgacctc agcgacggca aggacaacaa gatcgacgtc tccaaggtcg
     3661 acgtctccat ggatggtatc gaactcgagg accgc
//
LOCUS       DATCWM010000029         2417 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_453705, whole genome shotgun sequence.
ACCESSION   DATCWM010000029 DATCWM010000000
VERSION     DATCWM010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2417)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2417)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2417
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_453705"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..350)
                     /locus_tag="VIQ50_00530"
     CDS             complement(<1..350)
                     /locus_tag="VIQ50_00530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002964079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HEY9358888.1"
                     /translation="MTDAAPWPTQLRLHKDRKTLTIAFDNGETFDLSAEYLRVKSPSA
                     EVQGHSPDERKTVAGKKDVAILEVNPIGNYAVRLVFDDMHSTGIYSWDYFLALGRNRQ
                     AYWQDYLDDLAGKG"
     gene            772..>2417
                     /locus_tag="VIQ50_00535"
     CDS             772..>2417
                     /locus_tag="VIQ50_00535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007760963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEY9358889.1"
                     /translation="MDMIGGELGFMAASAGKAFLTLMEPHRLMFLGLGCIMGLVLGII
                     PGIGGLTGTAMLLPFTFNMDPYSAFALLLGLGATTATGDPIPAILFGVPGGAASAATV
                     LDGFPMAKKGEAGRALSAAYMSSLMGGVFGALLMAISIPILRPVMLFIGSPELLAFSV
                     LGISMVAVLSGNAPLRGITAGCLGVMIAMIGTDPQTGTLRWTFDSLYLWDGLPLTPLL
                     LGVFALPELCDLLIARVAISADTGTANIYKGQWQGVKDCFKHWWLIMRCSWIGGGIGS
                     IPGISASVVDWLAYGHALKTEKGASATFGKGDVRGVIASESSNNAKEGGALVPTVAFG
                     VPGSATMAILLGAFLIHGLVPGPDMLTKNLSITYAMVWSVALANILGAGLCYAFSPQF
                     AKLATLRYTLILPAVLGIIYIGAFEATRQWGDLFTLLFFGLVGWLMKQFKWPRPPLIL
                     GVVLGDTIERYLFISIERYGLSWMLRPIVVLLFALAILGLVRPFLQDIRSQGGVRRML
                     TSFQRPTFHLPQLFTMFMIALIGAAVVAALRWDFSAKIVPL"
BASE COUNT          379 a          765 c          779 g          494 t
ORIGIN      
        1 aagcctttac ccgcgagatc gtcgagatag tcctgccaat aggcctgccg gtttcgaccg
       61 agcgcgagaa agtagtccca actgtagatg ccggtcgaat gcatgtcgtc gaacacgagc
      121 cgcaccgcgt aattgccgat cggattcacc tcgagaatgg cgacatcctt cttgcccgcg
      181 acggtcttgc gctcgtcggg ggaatggccc tgcacctcgg cgctcgggct cttgacgcgc
      241 agatattcgg cgctcaggtc gaaagtctcg ccgttgtcga aggcgatggt cagcgtcttg
      301 cggtccttgt gcaaccgcaa ctgcgtcggc caaggcgctg cgtcggtcat ttcgatctcc
      361 tcgctcgagg gcagatcgac gtgaaagtag atcacgcgga gcccgcgcga tagctctcgc
      421 cgcgttgagg ccgacatggg gagcgcccca acggcggagc atctgcgccg caacggcgct
      481 gcccgggcta aagcgtcgca ttcgggaaag tgcaaacggc tttcccatca catgatcttc
      541 tgcttacatg gcaacaaaat aaccgaacga ccatgcgggt ttggagcccg gtcgtcgcaa
      601 acgaactcgg agaggggcgg cggtcatatg cgaattcgac ctggcgggat gcacgctttc
      661 attccgacgt cttgatctgg ccctgcaagg ccgaatgcgg ggtcgcgcgc gccggtgcaa
      721 cgcatgcgtc gcgggcgcgc gcgtgacgaa tctcgtggga ggacgcaagc gatggacatg
      781 atcggggggg agctcggctt catggccgcc tccgcgggca aggccttcct gacgctgatg
      841 gagccccacc ggctgatgtt tctggggctc ggctgcatca tggggctcgt gctcgggatt
      901 attcccggca tcggcggcct caccggaacg gcgatgctgc tgccgttcac gttcaacatg
      961 gatccttatt cggcgttcgc gctgctgctc ggcctaggcg cgacgaccgc gaccggcgac
     1021 cccatccccg cgatcctgtt cggcgtgccc ggaggtgccg cctcggcggc aacggtgctc
     1081 gacggcttcc cgatggcaaa gaagggcgag gcgggacgcg cgctcagcgc cgcctacatg
     1141 tcctcgctca tgggcggcgt cttcggtgcg ctgctgatgg ccatcagcat tccgattttg
     1201 cgcccggtga tgctgttcat cggttcaccg gagctcttgg ccttttccgt gctcggcatt
     1261 tccatggttg cggtgctgtc cggcaatgcg ccgctgcgcg gaatcacggc cggctgcctc
     1321 ggcgtcatga tcgcgatgat cggaacggat ccgcaaacgg gcacgctgcg ctggaccttc
     1381 gacagccttt acctctggga tggtttgccg ctcacgccgc tgctgctcgg cgtctttgcg
     1441 ctgccggagc tgtgcgacct cttgatcgcc cgggtcgcga tctcggccga caccgggacg
     1501 gccaacatct acaagggcca gtggcagggc gtgaaggact gcttcaagca ttggtggctc
     1561 atcatgcgat gctcgtggat cggaggcggc atcggctcca ttcccggcat cagtgcctcc
     1621 gtcgtcgact ggctcgccta cggtcatgcg ctcaagaccg agaaaggcgc cagcgcgaca
     1681 ttcggcaagg gcgacgtgcg gggcgtgatc gcctcggaga gctccaacaa tgccaaggag
     1741 ggcggcgcgc tggttccgac tgtcgccttc ggtgtccccg gcagcgccac catggcgatc
     1801 ctgctcggcg cgttcctgat ccacggtctg gtgccgggcc ccgacatgct gaccaagaat
     1861 ctcagcatca cctatgcgat ggtgtggtcg gtggcgttgg ccaacatttt gggcgcgggt
     1921 ctgtgctacg ccttcagccc gcaattcgcc aagctcgcga cgctgcgcta cacgctcatc
     1981 ctgccggccg tgctcggcat catttacatc ggcgcgttcg aagctacccg ccaatggggc
     2041 gatctcttca ccttgctgtt ttttggtctc gtcggctggc tcatgaagca attcaaatgg
     2101 ccgcggccgc cgctcatcct cggcgtcgtg ctgggcgaca ccatcgagcg ttatctgttc
     2161 atatcgatcg agcgctacgg gctgagttgg atgcttcgtc cgatcgtggt cttgctgttc
     2221 gcgctcgcca tcctcggcct ggtgcggccg ttcctgcagg acatccgcag ccaaggcggc
     2281 gtgcggagga tgctgacgag cttccagcgg ccgacatttc atctcccgca gctgttcacg
     2341 atgttcatga tcgcgctcat cggcgcagcg gtggtcgcgg cgttgcggtg ggatttcagc
     2401 gccaagatcg tgccgct
//
LOCUS       DATCWM010000030         2404 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_48903, whole genome shotgun sequence.
ACCESSION   DATCWM010000030 DATCWM010000000
VERSION     DATCWM010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2404
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48903"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..969)
                     /locus_tag="VIQ50_00540"
     CDS             complement(<1..969)
                     /locus_tag="VIQ50_00540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014498158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan -binding protein"
                     /protein_id="HEY9358890.1"
                     /translation="MALARARRDSGMNYWPGFVDALSTLILGIIFLLTVFVLVQFYLT
                     QEVTGKDTALNRLNAQIAQLTELLSLEKTGKLGLEEQLAMLRSSLTTAESERDRYKGL
                     YDGVGGDAQGKAELSGQLDAERRITARALAQVEVLNQQIAALRRQLSALEEALDASEK
                     RDKESQGRIADLGQRLNVALAQRVQELSRYRSDFFGRLRAILGNRPDIRIVGDRFVFQ
                     SEVFFDTAKATLDNPEGRAELDGLATALLEPEKKIPGEIPWVLRVDGHTDVRGINSPQ
                     FKNNWELSVARAISVVQYLVGKGVSPQRLVAAGFGEFQPIDTDKTEE"
     gene            complement(994..1986)
                     /locus_tag="VIQ50_00545"
     CDS             complement(994..1986)
                     /locus_tag="VIQ50_00545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018454614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotA"
                     /protein_id="HEY9358891.1"
                     /translation="MAHDIDPFKLSSPRIFLVRMVVFLTLCALVAVVLYKQIWTAFLN
                     NPGLNALILGVLAIGIALAFRQVIRLFPEIDWVNGFRLADPGLAVERPPVLLAPMAVL
                     LRDRIGRMAISAQMMRGILDSIAARLDEARDTSRYMTGLLVFLGLLGTFWGLIETMGS
                     VGSVISGLKPGGDATAIFESLKEGLAAPLAGIGISFSASLFGLAGSLILGFLDLQTSQ
                     AQNRFYTELEDWLSTTVRDLGVGSDAAIVAPAGAASGDLRTAIERLREAIGEGGSNRA
                     TTTAMANLAEAIQGLVHHMRSEQQMIRDWVDSQAQQHREVRRLLEILVRENVHK"
BASE COUNT          431 a          761 c          807 g          405 t
ORIGIN      
        1 ttcctcggtt ttgtcggtat cgatcggctg gaactcgccg aacccggccg cgacgaggcg
       61 ttgcggcgac acgcccttgc cgacgaggta ttgcaccacc gagatcgcgc gcgcgaccga
      121 cagctcccag ttgttcttga actgcgggct gttgatcccc cgcacgtcgg tatggccgtc
      181 gacgcgcagc acccagggga tctcgcccgg aatcttcttt tcgggctcga gcagcgcggt
      241 tgcaagccca tcgagttcgg cgcggccctc gggattgtcg agggtggcct tggcggtatc
      301 gaagaacact tccgactgga acacgaagcg gtcgccgacg atgcgaatgt cgggccggtt
      361 gccgaggatg gcgcgcagcc ggccgaagaa gtcggaacga tagcgcgaga gttcttgcac
      421 ccgttgggcg agcgccacgt tgagccgttg cccgagatcg gcgatgcggc cctgcgattc
      481 cttatctcgc ttctcgctgg cgtcgagggc ctcctccagc gcggagagct ggcgccggag
      541 cgccgcgatc tgctggttga gcacctcgac ctgcgccagc gcacgcgcag tgatccgccg
      601 ctctgcgtcg agttggccgc tgagctcggc cttgccctgg gcgtcgccgc cgacgccgtc
      661 atagaggccc ttgtagcggt cacgctcgct ctcggccgtc gtcaggctag atcgcaacat
      721 cgcgagttgc tcctcgagac cgagcttgcc ggtcttctcc agcgacaaga gctcggtcag
      781 ctgcgcgatc tgcgcgttaa ggcggttgag cgcggtgtct ttaccggtga cctcctgcgt
      841 caaataaaac tgcacgagga cgaagacggt tagcaggaag atgatcccga gaatcagcgt
      901 cgacagtgcg tcgacgaatc cgggccagta gttcatgccg ctgtcgcggc gagcgcgtgc
      961 aagagccatc ctacttagcc gttcccttct cttctacttg tggacgtttt cgcggacgag
     1021 aatttccaag aggcggcgca cttcgcgatg ctgctgggcc tgcgaatcga cccagtcgcg
     1081 gatcatctgc tgctcgctgc gcatgtgatg caccaggccc tggatcgctt ccgcgagatt
     1141 ggccatggcg gtcgtggtgg cgcgattcga cccgccctcg ccaattgcct ctcgcaggcg
     1201 ctcaatggct gtgcgcaagt cgcccgaggc ggcgccggcg ggcgccacaa tcgctgcatc
     1261 gctgcccacg ccgagatcgc gcacggtggt ggagagccaa tcctcgagtt cggtgtagaa
     1321 acggttctgc gcttggctgg tctgcaggtc gaggaaaccg aggatgagcg agccggcaag
     1381 cccgaacagc gaggctgaga acgagatccc gatgccggca agcggggcgg caagaccctc
     1441 tttgagcgac tcgaatatcg cggtcgcgtc accgccgggc ttgagaccgc taatcacgct
     1501 gccgaccgag cccatggtct cgatgaggcc ccagaacgtg ccgagcagcc cgaggaagac
     1561 gagcaggccg gtcatgtagc gcgaggtgtc gcgcgcctca tccaagcggg cggcgatcga
     1621 atcgaggatg ccgcgcatca tctgtgccga gatcgccatg cggccgatgc ggtcgcgcag
     1681 cagcacggcc atgggcgcaa gcaataccgg cggacgttcg accgcgaggc cggggtctgc
     1741 gaggcgaaaa ccgttcaccc aatcgatctc ggggaacagg cggatgacct gccggaaggc
     1801 gagcgcgatc ccaatggcga gcacgccgag aatcaacgcg ttgagcccgg gattgttgag
     1861 aaaggcagtc caaatctgtt tgtagagcac caccgcgacc agcgcgcaga gggtcaggaa
     1921 caccaccatc cggacgagaa agatccgggg cgacgagagc ttaaatgggt cgatgtcatg
     1981 cgccatggcg attagcgccc ctcatcgact cacaatacgg cagcgccgcg gcggaaggaa
     2041 gaaggagggc cgccggcacg acgtcgctga gcggccatcg acccgtttca aaagcgaaat
     2101 cgcgcaaacc ggtggtgctc gcggcccgat ccggggagcg gccgccggtg gaaccgcagc
     2161 gcgtggcggc atcccgcgac cgctgattcg ccggccgacg gaacgggtca acgggggttt
     2221 ccgtcagagc gccgcggctt cagccggaag agcgccgtgc agccgataga ctccccggcg
     2281 cgtccttgag cgcgtgcaac atctgacggt gaatgtcttc attggcggcg aggatgccgc
     2341 cggtcttgat catgtcctcg cgtccttcgg ggtcggtcac gaagccgccc gcttcgcgca
     2401 ccag
//
LOCUS       DATCWM010000031         5981 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_486125, whole genome shotgun sequence.
ACCESSION   DATCWM010000031 DATCWM010000000
VERSION     DATCWM010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5981)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5981)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5981
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_486125"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            520..1617
                     /locus_tag="VIQ50_00550"
     CDS             520..1617
                     /locus_tag="VIQ50_00550"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEY9358892.1"
                     /translation="MAMHNANKLKIGLFGANCSSGRAVTLVPERWSGSWPDNLKLARM
                     ADDAGIDFLLPIGRWKGYGGDTDYQGATLETITWATGLLALTKRVTVFGTVHAPLFNP
                     IIAAKEMVTADHIGEGRFGLNIVVGWNEGEFAMFGVKQREHEARYEYAQEWIDVIKMI
                     WSDKEDFDFKGKYLDMKGIRGKPKPYGGSRPVIMNAGASPVGQAFAIRNCDAFFLQAS
                     RTSLDETAQRVTSAKEQAKQQDRELGVYTVGVVTCRPTKKEAEDYFHYSIVERADWRA
                     VDDILALKDTTAQNTPPEKFQQIRTGYAQGMGGLPIVGDPDHVTSQLIDLSKAGLTGV
                     AVSLVNYLDELPFFCEEVLPRLQRAGLREKL"
     gene            complement(1632..2624)
                     /locus_tag="VIQ50_00555"
     CDS             complement(1632..2624)
                     /locus_tag="VIQ50_00555"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9358893.1"
                     /translation="MAPRILVAVIGLAMTLGHAQAQAILDAEPTSYPNRAIRIIVPFP
                     PGGPADMIARLVAQRMSEDWGQPVLVENRAGGNTAIGAQLAVRSAPDGYTLLAAMDTT
                     MVMNPLVTPNLPYDPLRDLAPITLLIRTVALVVVRSDGPKTIKELIAKAKANPGKLNM
                     GAGTITSRLGALQFAKAAEIDVQLVPFKGSAEIGQAVLGGTVDFALDSTGTSLPLIEG
                     GRYRALAKYSNRPLPILPDLPSLSAAAELPALEESSTWVALVAPAGTPPTIIGKIHRE
                     VVRLHADTALRAKLEKVGIALAGSASPAEFDAYIRRETDRWSKVLKENGNLKLD"
     gene            complement(2635..3618)
                     /locus_tag="VIQ50_00560"
     CDS             complement(2635..3618)
                     /locus_tag="VIQ50_00560"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9358894.1"
                     /translation="MSQTSKPVNAGRLACAAALLALFVSAAAAQTYPTRQITLVVPFA
                     PGGPADFLGRLMGQKMGEDLGQQIVVDNRPGANTIIGAQAVAKAAPDGYTLLMAIDGT
                     LVMNPFLYGKLAYDPFKDFTPVSLIALVPSALVGNINVPVNSIGELVEQEKAKPGTFQ
                     IGISTPTSQVNVGLLNMMAGTHFSMVPYRGGTTQITGILAGDIAFGMESINVALPLWR
                     DKKVKILGLVSAQRLSLAPEIPTIAETFPGYDLGIWQSIVAPAGTPREVVLKLHSSIR
                     KALAAPEVREKLLNAGIEPASSNTPEEFAAFIRTQADTRAKVIQAVGMKLD"
     gene            complement(3625..4392)
                     /locus_tag="VIQ50_00565"
     CDS             complement(3625..4392)
                     /locus_tag="VIQ50_00565"
                     /inference="COORDINATES: protein motif:HMM:NF036686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9358895.1"
                     /translation="MATITTLERGQAETTLPAPRARIGMIVPSVNSMTEPQFNHFAPP
                     GLGVHVARARVAGPWKRPLAAMADEIATSAKLLADVAPDLIIFHCTDTSMTQGPQGES
                     RILDIIQDATGIAALATSRLVLEALQALGLRSLILLSPYKSNRAVVEYLGATGFTVVH
                     DVALGLEGLEFAAVTPNEWAQLARKHDRSDADGIFLSCTNTTQIEAIEDIERALGKPV
                     VNSNQAVLWGCLKRLQPMLGPLPAMPRLGRLMQHMDG"
     gene            4559..4930
                     /locus_tag="VIQ50_00570"
     CDS             4559..4930
                     /locus_tag="VIQ50_00570"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEY9358896.1"
                     /translation="MNGNEIDMRMFAQRIGASVTFSAGSIVFNKGDAGSCMYIVQSGL
                     IEMVIGDKVIEICGANEAIGFMSMVDDAPRSSTARVKETCELSLIDQRKFRFMVDEVP
                     NFALYIMGAMARRIRGMSQVM"
     gene            5071..5981
                     /locus_tag="VIQ50_00575"
                     /pseudo
     CDS             5071..5981
                     /locus_tag="VIQ50_00575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494726.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016703 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of one atom of oxygen (internal
                     monooxygenases or internal mixed function oxidases)
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
BASE COUNT         1075 a         1854 c         1966 g         1086 t
ORIGIN      
        1 gcggggaagg ggacgatcat tcggatcggc cgattgggaa agctcgcgga cgggtcctcc
       61 gcagccgccg cgcctgacgc cgaaaccgcc aggcttgcag cgagtagaaa gcgcactgcc
      121 cgcgccattg ctcctcccgg cgacttcgtg ctgtctgctt gcgcaattct caccgttgcg
      181 cgtttcgctg gcaaccgatt catgccggcg tcccattcaa aacgcggcgc ccatgggcta
      241 gtgtccccga ttccgaagtt cgcatcattg tgccgcagcc tcgtttgcga acttcggaat
      301 cgaaggacac tagcaactta ttgatctagt gtggctttgg ttcagaagtc cgcatttcgg
      361 actcactgca agaaagatgc ggacttctga actgccacac tagcccggcc tcccattcaa
      421 aacgcgcccg ccttgagcta gcttcgcctg ccgtctgcca gatcgaacga aggtccagga
      481 gaaaccgtgc tcgctcccgc tccatcccga caagaccgca tggcgatgca caatgcgaac
      541 aagctcaaga ttggcctgtt cggggcgaac tgctcctcgg gacgcgccgt cacgctggtg
      601 ccggagcgct ggtccgggag ttggccggac aacctcaagc ttgcgcgcat ggcagacgac
      661 gccggcatcg actttctcct cccgatcggg cgctggaagg gttatggcgg cgacaccgat
      721 taccagggcg cgacgctcga gaccattact tgggcgaccg gcctgcttgc gctgaccaaa
      781 cgcgtcaccg tcttcggcac ggtgcatgcc ccgctgttta atccgatcat tgccgccaag
      841 gaaatggtga ccgccgacca tatcggtgaa ggccgcttcg ggctcaacat cgtggtcggc
      901 tggaacgagg gcgaattcgc gatgttcggc gtcaagcagc gcgagcatga ggcgcgctac
      961 gaatacgcgc aggaatggat cgatgtgatc aagatgattt ggtcggacaa ggaggacttc
     1021 gattttaaag gaaaatatct cgacatgaag ggcatccgcg gcaagccgaa gccctatggt
     1081 ggctcgcggc cggtgatcat gaacgccggg gcctctcccg tcggccaggc cttcgccatt
     1141 cgcaactgcg atgccttctt cctgcaggcg tcgcgcacct cgctcgacga gaccgcgcaa
     1201 cgggtcacga gcgccaaaga gcaggcgaag cagcaggaca gggagctcgg agtctatacc
     1261 gtgggcgtcg tcacttgcag gccgaccaaa aaagaggccg aggactactt ccactattcg
     1321 atcgtggaac gtgccgactg gagggcggtc gacgacatcc tcgcgctcaa ggacaccact
     1381 gcgcagaaca cgccgccgga gaagtttcaa cagatccgga ccggctacgc gcagggcatg
     1441 ggcggcttgc cgatcgtggg cgacccggac cacgtgacga gccaactcat cgatctcagc
     1501 aaggcggggc tgaccggggt cgccgtgtcg ctcgtcaact atctcgacga gcttccgttc
     1561 ttctgcgagg aggttctgcc gcgcctgcaa cgggcgggcc tgcgcgagaa actctgatca
     1621 acgaaaggga atcagtcgag cttgagatta ccgttctcct tgagaacctt ggaccagcgg
     1681 tccgtctcgc ggcgaatata ggcatcgaac tcggcgggcg aggcgctgcc ggcgagcgcg
     1741 atgcccacct tctcgagctt cgctcgcaag gcggtgtcgg cgtggaggcg cacgacttcg
     1801 cgatggattt tgccgatgat cgtcgggggt gtgccggcgg gcgccaccag cgccacccat
     1861 gtggagcttt cttcgagcgc cggcaattcc gccgccgcgc tcaggctcgg cagatcgggc
     1921 aagatgggca acggccggtt gctgtatttg gcgagcgccc ggtagcggcc gccctcgatc
     1981 agcggcaagc tcgtgccggt gctgtcgagg gcgaaatcga ccgtcccccc cagtacggct
     2041 tggccgatct cggcgctgcc cttgaatgga acgagttgca cgtcgatctc cgcggccttc
     2101 gcaaactgca gcgcgccgag gcgcgaggtg atggtgccgg cgcccatgtt gagcttgccg
     2161 ggattggcct tcgccttggc gattagctcc ttgatcgtct tggggccgtc gcttcgcacc
     2221 accaccaacg ctacggtcct gatcagcaac gtgatcggcg ccaggtccct gagcggatcg
     2281 tagggcagat tcggcgtgac cagcgggttc atcaccatgg tcgtgtccat cgccgccaac
     2341 agcgtgtagc cgtcgggcgc cgagcgtacc gccagttgcg cgccgattgc agtgttgccg
     2401 ccggcgcggt tctcgaccag caccggctga ccccaatcct cgctcatccg ctgcgcgact
     2461 aatcgcgcga tcatgtctgc cgggccgcca ggcgggaacg gcacgatgat ccggatcgcc
     2521 cggttcggat aactggttgg ctccgcgtcg agaatggctt gggcttgcgc gtgtccgagc
     2581 gtcatggcca agccgatcac ggcgacgagg atgcgaggcg ccatcgcgtg actctcagtc
     2641 gagcttcatc ccgaccgcct ggatgacctt ggctcgcgtg tcggcctgcg tgcggatgaa
     2701 cgcggcgaac tcttccggcg tattgctgct ggccggctcg atgccggcgt tgagaagttt
     2761 ttcgcggacc tccggcgccg ccagcgcctt cctgatcgag ctatggagct tgagcacgac
     2821 ctcccgcggc gtgcccgcgg gcgcgacgat gctctgccag atgccaagat cgtagccggg
     2881 gaaagtctcg gcgatggttg gaatctccgg tgcgagcgag agccgctgcg cgctgaccag
     2941 gccaagaatc ttgaccttct tgtcgcgcca aagcggcagc gccacgttga tgctttccat
     3001 gccgaaggca atgtcgccgg caagaatgcc ggtaatctgc gtggtcccgc cgcgataggg
     3061 caccatgctg aaatgggtgc cggccatcat gttgagcagg cccacattga cctgagaggt
     3121 cggcgtgctg atgccgatct ggaaggtgcc cggcttcgcc ttctcctgtt cgacaagctc
     3181 tccgatcgag ttgaccggga cattgatgtt gccgaccagc gcggacggga ccagcgcgat
     3241 gagcgagacc ggcgtaaaat ccttgaacgg atcgtaggcg agcttgccgt agagaaacgg
     3301 attcatgacg agcgtgccgt cgatcgccat cagcagcgtg tagccatcgg gcgcggcctt
     3361 ggcgacggcc tgggcgccga tgatggtgtt ggcgcccggc cggttgtcga cgacgatttg
     3421 ctggcccaga tcttcgccca tcttctggcc catgaggcgg ccgagaaaat cggcggggcc
     3481 gcccggcgcg aacggaacga cgagcgtgat ctggcgcgtc ggataggtct gggcggccgc
     3541 tgccgaaacg aagagcgcca gcaacgccgc cgcgcaggca agccgtccgg cattcaccgg
     3601 cttcgacgtc tggctcaccg cttctcaccc atccatgtgc tgcatcaacc ggccaagccg
     3661 cggcatcgct ggcaagggac cgagcatggg ctgaagccgt ttgaggcaac cccacagcac
     3721 cgcctggttg ctgttgacca ccggcttgcc cagcgcacgc tcgatatctt cgatcgcttc
     3781 gatctgagtg gtattggtgc agctcagaaa gatgccgtcg gcgtcgcttc gatcatgctt
     3841 gcgcgcgagc tgcgcccatt cgttcggggt gacggcggcg aattcgagcc cctcaagacc
     3901 gagcgccacg tcgtggacga cggtaaagcc ggtcgcgccg agatactcga ccacggcccg
     3961 attgctcttg taggggctga gcaggatgag gctgcgcagt ccgagcgcct gcaaggcttc
     4021 gagcacaagg cggctggtcg ccaaagccgc gatcccggtt gcgtcttgaa tgatgtcgag
     4081 gatacggctt tcgccctgcg ggccttgggt catcgacgta tcggtgcagt ggaagatgat
     4141 cagatcggga gccacgtcgg cgagcagctt tgccgaagtt gcgatctcgt cggccatcgc
     4201 cgcgagcggc cgcttccatg ggccggcgac gcgggcgcgc gcgacgtgca cgccgagacc
     4261 gggcggtgca aaatggttga actgcggctc cgtcatgctg ttgacggagg gaacgatcat
     4321 tccgatccga gcccgcggcg ccggcaaagt ggtttcagct tgtcctcgct cgagcgttgt
     4381 gatggtagcc atgatcgtgc actccgcagt gaccggcgat tggcggcccc tgggcgctgg
     4441 cccagcatgg gggctaagga taatcgcgct ctacccgagg caaagctagc ccgcggccgc
     4501 gcgtttttgg cataaagccg ctatcaaggg gcgtgtggct tggaaacgcg aggcggacat
     4561 gaatggcaat gaaatcgaca tgcgaatgtt cgcgcagcgg atcggcgcat ctgtgacgtt
     4621 cagcgccgga agcattgtct tcaataaggg tgatgcgggt tcctgcatgt atatcgtgca
     4681 gtccggcctc atcgagatgg tcataggcga caaagtgatc gagatctgcg gagcaaacga
     4741 agcgatcgga ttcatgtcca tggtcgacga cgcgccgaga agttcgaccg cgcgcgtcaa
     4801 agagacctgc gaactctctc tgatcgatca acgtaagttc cgctttatgg tcgacgaggt
     4861 gccgaacttc gccctctaca tcatgggggc catggcgcgg cggattcgcg gcatgagcca
     4921 agtgatgtga agatccgtgc gagcgggtag cggcgtcacg gcatggcaaa ctggccatat
     4981 gtgccatgcg ccgcgggccg ggcaaaggcg ggtgctattg aactgccgac gcgttaattt
     5041 gggcgtggca tcaacaagag ttgtgcggat atgtggccgg atcgccgtct catcgagttg
     5101 ttcaagatcg agcttccgat cgtccaggcg ccgatggccg gcgccataga ctgggagctg
     5161 atagcagccg cggcggaagc gggcgcgctc ggctctttgc catgcgcgat gctcaatgcg
     5221 cagcagatcc gcgagcagat ggggaaaatt cgcgcccaca cgaagaagcc ggtaaatctc
     5281 aatttcttct gccattcgcc gccggtgccc agcaacgcgc gcgaggcgcg atggcgggaa
     5341 cgattggagc catattatcg cgagctcgcg attgatcccg ccgccccggt gccctcgagc
     5401 aaccgcaccg cgttcgattc cgcgatgtgc gacgtcgtcg aggagacgaa gcccgaagtc
     5461 gtgagcttcc actttgggct gcccgagccg ggtctgctgc ggcggctcta ggcggcgggg
     5521 tccctggtga tgggctcggc gacgaccgcc gccgaggcgc gatggctcga agcgcgcggc
     5581 gtcgacgccg tcatcgccca gggcaacgag gccggcggcc accgcggcat ttttctcagc
     5641 gatgacatcg cgacccaacc cggaaccttc gcgctcgttc cgcagatcgc cgacgcagtc
     5701 aaggtgcccg tcattgccac cggcgcggtc accgacgggc gcggcatcgc ggccgcgttc
     5761 gcgctcgggg ctgtcggggt gcaggtcggc accgcgtatc tgtggtgccc agaggcgaag
     5821 atttcggcgc cccaccgcgc cgcgctcaaa tcagcgcgcg acgacgcgac agcgttgacc
     5881 aatcttatga ccggccgtcc ggcgcgcggc ataatcaacc gcctgatgcg ggagatcggg
     5941 cccatgtccg aggtggcgcc cgagtttcct ctcgcggcgg g
//
LOCUS       DATCWM010000032         6649 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_254026, whole genome shotgun sequence.
ACCESSION   DATCWM010000032 DATCWM010000000
VERSION     DATCWM010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6649
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_254026"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..451)
                     /locus_tag="VIQ50_00580"
     CDS             complement(<1..451)
                     /locus_tag="VIQ50_00580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III domain-containing protein"
                     /protein_id="HEY9358897.1"
                     /translation="MSSGRAGKPASSEAPSLPSAGKPSDPAALDRTPRSSAKERRRRE
                     LAALEQRIGYRFKDPALLEQALTHISALSGARNRAASYQRLEFLGDHVLGLVVSDMLF
                     HAFAKADEGEMSRRLADLVRKEACADVGRAIELGAAIRLGGSEANAGG"
     gene            complement(448..1203)
                     /gene="lepB"
                     /locus_tag="VIQ50_00585"
     CDS             complement(448..1203)
                     /gene="lepB"
                     /locus_tag="VIQ50_00585"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEY9358898.1"
                     /translation="MSVTAGTKRKEGGIAETGRVIFHALIIALVIRTFLFQPFNIPSG
                     SMKATLLVGDYLFVSKYSYGYSHYSLPFSPPLFSGRIWASQPARGDVVVFRLPKDDST
                     DYIKRVIGLPGDRIQMIDGVLHINGELVKRERVDDFVETEEGTRATRVKRWRETLPNG
                     VTYTTLDLVDNGFYDNTPVYQVPAGHFFMMGDNRDNSTDSRVLSQVGYVPFENIVGRA
                     QIIFFSIREGEHAWMVWRWPWAVRWDRLFTIVR"
     gene            complement(1502..1912)
                     /gene="acpS"
                     /locus_tag="VIQ50_00590"
     CDS             complement(1502..1912)
                     /gene="acpS"
                     /locus_tag="VIQ50_00590"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HEY9358899.1"
                     /translation="MILGVGSDLIDVRRIERTIERHGDRFLARIFTATERAKADGRAR
                     RAETYAKRFAAKEACAKALGTGLRAGVFWRDMGVINLPSGRPTMTLTGGALARLNAIT
                     PAGFKARIDVTVTDEGPMAQAVVVISAVPLAPSA"
     gene            complement(1909..2655)
                     /locus_tag="VIQ50_00595"
     CDS             complement(1909..2655)
                     /locus_tag="VIQ50_00595"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HEY9358900.1"
                     /translation="MSAPHLRLGVNVDHVATIRNARGGHHPDPVHAAQIAIEAGADGI
                     TAHLREDRRHIRDDDIARLKSELAKPLNLEMAATEEMVRIAVATAPHAACLVPERREE
                     RTTEGGLDVAGQHEALASVIGRLRAAGIRVSLFIAAEPRQIQAAVAIGAPVIEIHTGA
                     WCDALADKRMSAVQAEWERIRHGAQLARRLGLEVHAGHGLNFATAEAIAALPEIVELN
                     IGHFLIGEAVSCGLAHAVKTMRAAIDRGRT"
     gene            complement(2738..5074)
                     /locus_tag="VIQ50_00600"
     CDS             complement(2738..5074)
                     /locus_tag="VIQ50_00600"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEY9358901.1"
                     /translation="MAHSSTNLPRMQNQSRARAPLERSPNVVSQVLEKAVKQTKPPQP
                     QMMRQYDLIERVRRYNPNTSEALLNRAYVYAMKAHGEQRRASGDPYFSHPLEVAAILT
                     DLKLDDATIAAALLHDTIEDTTATRAEIDQMFGQDIGALVEGLTKLKKLDLVTKEAKQ
                     AENLRKLLLAIADDVRVLLVKLADRLHNMRTLSHMPPEARRRSAEETLDIYAPLAGRM
                     GMHGMREELEDLAFHELNAEAYAVISARLDALEAKNVGLVAEIEQQLTRKLSDRGIQA
                     EVSGRRKRAYSIWRKMERKSVGFEQLSDIFGFRVVVKTLPECYQALGIVHTTWPVVPG
                     RFKDYVSTPKQNDYSSIHTTVIGPSQQRVELQIRTRDMHEIAEYGIAAHALYKDSVGS
                     PTEMLSRESSAYAWLRRTIELLAEGSNPEEFLEHTKLELFHDQVFCFTPKGKLIALPR
                     GANAIDFAYAVHTDVGNMAVGCKINGGIAPLVSELTNGDEVEIITSRAQTAPPTAWES
                     LVTTGKARAAIRRATRAAVRNQYAGLGRRIVERLCQRAKIAYSDEKLQGALPRLARAS
                     LEEVMSSVGRGELGAADVVRAMYPDYKEERAAAIAQQPKPESGWFGLKRAKSVKVKVP
                     GEPGAAIPIRGINSDLPVRFAPNGGAVPGDRIVGILTPGEGITIYPIQSPALKDFEDA
                     PERWLDLRWDVEERTPQRFPARIVLQTVNEPGSLAQVAQIIAEHDGNIDNIGMERSSP
                     DFTSVTIDLEVFDIKHLNSIIAQLRAKDVVAHAERVNA"
     gene            complement(5268..5660)
                     /gene="rpoZ"
                     /locus_tag="VIQ50_00605"
     CDS             complement(5268..5660)
                     /gene="rpoZ"
                     /locus_tag="VIQ50_00605"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HEY9358902.1"
                     /translation="MARVTVEDCIDKVENRFDLVLLAGHRARMISSGSQITVDRDNDK
                     NPVVALREIAEKTISPDDLKEELVHSLQKYVEVDEPEPEAAPLITAAGGSVDADDTEV
                     TVDRMTEEELLKGLEGLTPPEEQPEEEE"
     gene            6197..>6649
                     /locus_tag="VIQ50_00610"
     CDS             6197..>6649
                     /locus_tag="VIQ50_00610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEY9358903.1"
                     /translation="MESNTEKMALFIDGANLYATAKSLGFDIDYKRLLREFQSRGYLL
                     RAFYYTAVIEDQEYSSIRPLIDWLDYNGYSVVTKATKEFVDQTGRRKIKGSMDIELAV
                     DAMEIAGSIDHMVLFSGDGDFRSLVEAVQRRGVRVTVVSTISTQPPMVA"
BASE COUNT         1154 a         2095 c         2116 g         1284 t
ORIGIN      
        1 gcccgccggc attggcctcg gatccgccga gcctgatggc ggcaccaagc tcgatcgcgc
       61 gcccgacatc cgcgcaagcc tccttgcgta cgagatcggc gagacgccgc gacatttccc
      121 cttcgtcggc tttagcgaag gcgtggaaca gcatgtcgga gaccacgagg ccgagtacgt
      181 gatcgccgag aaactcgagc cgctggtagg aggcggcacg gttgcgcgcc ccgctcagcg
      241 cggaaatgtg cgtcagtgcc tgctcgagca acgcaggatc cttgaatctg tagccgatgc
      301 gctgctcgag cgctgcgagt tcgcggcgcc ggcgctcctt cgcgctggac ctcggagtgc
      361 ggtcgagggc agccggatcg gacggcttgc cggcggaggg taggctgggc gcttcgctgg
      421 aagccggttt tcctgctcgc ccgctgctca tctgacgatc gtgaacagcc ggtcccagcg
      481 cacggcccac ggccagcgcc ataccatcca cgcgtgctcg ccctcgcgga tggagaagaa
      541 gatgatttgg gcgcgcccga cgatgttttc gaacggtaca tagccgacct ggctgagcac
      601 gcggctgtcg gtggaattat cgcgattgtc gcccatcatg aagaagtggc cggcgggcac
      661 ctgatagacc ggggtgttgt cgtagaagcc gttgtcgacg agatcgagcg tcgtataggt
      721 cacgccattt ggcaacgtct cccgccaccg cttgaccctg gttgcgcgtg tgccttcctc
      781 ggtctcgacg aagtcatcga cacgctcgcg cttgaccagt tcgccgttga tgtgcagcac
      841 gccgtcgatc atctggattc tgtcgccggg caacccaatc acccgcttga tgtagtcggt
      901 cgagtcatcc ttcggcaggc gaaacacgac gacgtcgccg cgcgcgggct gcgaggccca
      961 gatgcgtcca gaaaacaggg gcggtgagaa cggcaatgaa tagtggctgt agccgtagga
     1021 atatttcgat acgaaaagat aatcgccgac cagcagcgtc gctttcatcg agcccgatgg
     1081 aatattaaag ggctgaaaca ggaaggtgcg gatgacgagc gcaatgatga gggcgtgaaa
     1141 gatcacgcgc ccggtctcgg caataccgcc ctcttttctc ttcgttcctg ctgtcacgct
     1201 catctgcctc tgcatccttt tggccaagcg cccccgggcg gccgccgact ccacaacccc
     1261 gtccgccgct atatgaaatt actgtgtttt cagcgtttta gtccttcggc acgcgcccag
     1321 cccgaccgcc gccacctttt tcgccgcgcc cttgtaaccg ctcgcaagcc aaggcgcaaa
     1381 cgttggcaaa tatggggtta ggacgcagat atggcaatca ttgcatcccc gcaattcgat
     1441 gcaacggccg cgcgagcccg gcacgttttg gcccgctcgt gcgcaccaag caggcgatcg
     1501 ctcatgcgga tggcgcaagc gggacggccg agatcaccac cacggcctgc gccatgggcc
     1561 cctcgtcggt gacggttaca tcgatgcgcg ccttgaagcc cgccggcgtg atggcattga
     1621 ggcgcgcgag cgccccgccg gtgagtgtca tagtgggccg gcccgacggc agattgataa
     1681 cccccatatc gcgccaaaat acgcccgcgc gcagaccggt gccgagcgcc ttggcgcagg
     1741 cttccttggc cgcgaaccgt ttggcatagg tctccgccct tcgagcgcgg ccgtcggctt
     1801 tcgcccgctc ggtcgcagtg aagatgcggg cgaggaaacg atcgccgtgc ctctcgatcg
     1861 tgcgctcgat gcggcgcacg tcgatgagat cggagccgac gccgaggatc atgtgcgccc
     1921 ccggtcgata gccgcgcgca tggtcttcac cgcatgagca aggccgcaag agaccgcctc
     1981 cccgatcaga aagtggccga tgttgagctc gacgatttcg ggcaatgccg cgatcgcctc
     2041 ggcggtggca aaattgaggc cgtgaccggc atgaacttcg agcccgagcc gtcgggcgag
     2101 ctgtgcgccg tgacggatcc gctcccactc ggcctgcacg gccgacatcc gtttgtcggc
     2161 aagcgcgtcg caccacgcgc ccgtatgaat ctcgatcacc ggcgcaccga tcgcgaccgc
     2221 ggcctgaatc tggcgcggct cggcggcgat gaacagcgag acgcggatcc cggccgcccg
     2281 caatcggcct atgaccgagg cgagtgcctc gtgctggccg gccacgtcga ggccgccttc
     2341 ggtcgtgcgt tcttcgcgcc gttcgggaac gagacaggcg gcgtgcgggg cggtggcaac
     2401 cgcgatccgc accatctcct cggtggccgc catttcgaga ttgagcggct tggcgagctc
     2461 gctcttgagc cgcgcaatgt cgtcatcgcg gatgtgccga cgatcttcgc gcagatgcgc
     2521 ggtgattccg tcggcgccgg cctcgatcgc gatctgcgcc gcatgcacgg gatccgggtg
     2581 atgcccgccg cgggcattac ggatggtggc gacgtgatcg acattgacgc cgaggcggag
     2641 gtgaggagcc gacatttttt gccgtcagat catgcgcccg cgatctgcct gcccgcggga
     2701 ccggtttcgt cgggaattgc cgccggcaag ctcgacgtca agcgttcacc cgctcagcgt
     2761 gcgccaccac gtccttcgcc cgtagctgcg caataatgga gttgagatgc ttgatatcga
     2821 acacttcgag atcgatggtc accgacgtga agtcgggtga tgaccgctcc atgccgatgt
     2881 tgtcgatgtt gccgtcgtgc tcggcgatga tctgggcgac ctgggcgagc gatccgggct
     2941 cgttgaccgt ctgcagcacg atgcgcgccg gaaaacgctg cggggtgcgc tcctccacgt
     3001 cccagcgcag atcgagccat cgctcgggcg catcctcgaa gtccttcaag gccggcgatt
     3061 ggatcggata gatggtaatg ccctcgccgg gggtgagaat gccgacgatg cggtcacccg
     3121 gcaccgcgcc gccgttgggt gcgaagcgca cgggcaaatc cgaattgatc ccacgaatgg
     3181 gaatggcagc gcccggctct cccggaactt tcactttgac ggatttcgct cgcttgaggc
     3241 cgaaccagcc gctttccggc ttcggctgct gcgcgatggc ggccgcgcgt tcctccttgt
     3301 agtcgggata catcgctcgc accacgtcgg ctgcgcccaa ctcgccacga ccgaccgacg
     3361 acatcacctc ctcgagcgag gcgcgagcca gtcgcggcag cgcgccttgg agcttttcgt
     3421 cggaataggc gatcttcgcg cgctggcaga gccgctcgac gatacgccgg ccgaggccgg
     3481 catattgatt gcgcacggcg gcgcgggtgg cgcggcggat cgccgcgcgc gccttgccgg
     3541 tggtcacgag cgattcccaa gccgtcggcg gtgccgtctg ggcgcgggag gtgatgatct
     3601 ccacttcatc gccgttggtg agctccgaga ccagcggcgc aatcccgccg ttgatcttgc
     3661 agccgaccgc catgttgccg acgtcggtgt gcaccgcgta ggcgaaatcg attgcgtttg
     3721 ccccgcgcgg aagcgcgatc agcttgccct tcggcgtaaa gcagaacacc tggtcatgga
     3781 acagttcgag cttggtgtgc tcgaggaact cctccgggtt cgagccttcg gcgagcagct
     3841 cgatggtgcg gcgcaaccat gcatacgcgc tcgattcgcg cgagagcatt tccgtcggag
     3901 agccgacgga atccttgtag agggcgtggg cggcaatgcc gtattcggcg atctcgtgca
     3961 tgtcgcgcgt gcggatttgc aattccacgc gctgctggct tgggccaatc accgtcgtat
     4021 gtatcgagct atagtcgttc tgcttgggag ttgagacgta gtctttgaag cggcccggaa
     4081 ccaccggcca ggtcgtatgc acgatgccga gcgcctggta gcactcggga agcgtcttga
     4141 ccacgacgcg aaacccgaag atgtcggaaa gctgctcgaa gccgaccgat ttgcgctcca
     4201 tcttgcgcca gatcgagtag gcgcgcttgc gccggcccga cacctcggcc tggatgcccc
     4261 gatcggaaag cttgcgcgtg agttgctgct cgatctccgc taccagcccc acatttttcg
     4321 cttcgagtgc gtcaagccgc gcgctgataa ccgcgtaggc ttcggcattg agttcgtgga
     4381 aggccagatc ctcgagttcc tcgcgcatgc cgtgcatgcc catgcgtccg gcgagcgggg
     4441 cgtagatgtc gagggtctcc tcggcgctgc gtcgacgcgc ctcgggcggc atgtgggaca
     4501 gcgtgcgcat attgtgcagc cggtccgcca gcttgaccag cagcacccga acgtcgtcgg
     4561 cgatcgccaa caagagcttg cgcaggttct ccgcctgctt ggcctccttg gtgacgaggt
     4621 cgagcttctt cagcttggtg aggccctcga ccaacgcgcc gatatcctgg ccgaacatct
     4681 gatcgatctc ggcgcgcgtt gcggtggtat cctcgatcgt gtcgtgcagc agcgcggcag
     4741 caatagtggc gtcgtcgagc ttgaggtcgg tcaagatggc cgccacttcg agcggatggg
     4801 aaaaataagg gtcccccgag gcgcgccgct gctcgccatg cgctttcatg gcgtagacat
     4861 aggcgcggtt gagcagcgcc tcgctggtat tcggattgta gcgcctcacg cgctcgatca
     4921 ggtcgtactg ccgcatcatt tgcggctgcg gcggtttggt ttgttttacc gccttctcaa
     4981 gcacttgcga gacgacattg gggctgcgct caagcggcgc ccgcgcgcgg gactgattct
     5041 gcatccgcgg cagattggta gacgaatgcg ccatcgttag cctcgggtcc gccttcgcag
     5101 gctcggcgga tactataccc caaggatatc atgacggtta ttaacggcca caaggcgtga
     5161 accgcttccc cggcggcggt acccgccagg gcgtagccgg ccaccgcaac tcgggccagg
     5221 aggttcgcgc ccccacctca gcccggacga gcgcgcgctc gcaggaatta ttcttcctct
     5281 tcgggctgtt cctcgggcgg ggtgagccct tccagtccct tgagaagctc ttcctcagtc
     5341 atccgatcga ccgtcacctc ggtatcgtcg gcatcgacgc tgccgccggc cgcagtgatc
     5401 agcggtgccg cctcgggctc aggctcgtcg acctccacat acttctgcag ggagtgcacg
     5461 agttcttcct tgaggtcatc gggagagatc gtcttctcgg caatttcgcg aagcgcgacc
     5521 acgggattct tgtcgttgtc gcggtcgacg gtaatctgag agccggacga gatcattcgc
     5581 gcgcgatggc ctgccaacag cacgagatcg aaacggttct ccaccttgtc gatacagtcc
     5641 tcgacggtga cgcgggccat ggctaacgct cctgcatacc aatggaactt gtaaaaagtg
     5701 gccgttaggt agcgatcccg ccagcaaagt gcaaggtgaa attcaggcaa ttcattccgg
     5761 tccatgcata cctcagggcc gggcttatcg ccgcaagtcg ggttacccgt tgcggcgttt
     5821 catcggttgg cagtgcaaga gcgcggaact cggccaagcg cgagttcccg tgccgttcgc
     5881 tttttgcgca atccgagcgc ggatacccgg acagcaccga cgcaatctgc gcaagcttga
     5941 ctgcgtggcg agcatggcaa gagcattaca ttttccttgg actcgcagcg cgcctctgtt
     6001 aggcaggtga ggaactctta tgcaatgctt agtcttgtat ttccggattg gttgtgacaa
     6061 cgagcagcgt ccgcactttg cgcggcagac gattgctccg ttccgacagt aggtgaggac
     6121 cggcagcttt agccggcggc cgcgcgcctc cggagccggt taccaaactt ttgagtgagc
     6181 ttacacgaga gcaatcatgg aatccaacac ggaaaagatg gccctgttca ttgacggcgc
     6241 caacctctat gccactgcca agtcgctcgg tttcgatatc gattacaagc gcctgctccg
     6301 cgagtttcag tcgcgcgggt atctcttgcg cgccttctac tacaccgcgg tgatcgagga
     6361 tcaggaatat tcgtcgatca ggccgctgat cgattggctg gactacaacg gctacagcgt
     6421 ggtgaccaag gcgacgaaag aattcgtcga tcaaaccggc cggcgcaaga tcaagggcag
     6481 catggatatc gagcttgccg tcgacgccat ggaaatcgct ggctccatcg atcacatggt
     6541 gctgttctcc ggggacggcg acttccgctc cctggtcgag gccgtgcagc ggcgcggggt
     6601 acgggtgacg gtcgtgtcca cgatctccac acagccgccg atggtcgcc
//
LOCUS       DATCWM010000033         2651 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_81275, whole genome shotgun sequence.
ACCESSION   DATCWM010000033 DATCWM010000000
VERSION     DATCWM010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2651
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81275"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(202..699)
                     /gene="tsaA"
                     /locus_tag="VIQ50_00615"
     CDS             complement(202..699)
                     /gene="tsaA"
                     /locus_tag="VIQ50_00615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HEY9358904.1"
                     /translation="MNDKAFGIRDGEVAIDLPDKFDASLYFIGHIRTPWTRREECPKN
                     ARESDAVCTIAVDARWAEALAGVETCSHLVVLYWMNRSRRDLVLQVPRHYGVGRGTFA
                     LRSPARPNPIAMSVVRLVGVEGTTLSVVGLDCLDNTPLLDIKPYFASTDAVADAVVGW
                     HAGRQ"
     gene            856..1857
                     /locus_tag="VIQ50_00620"
     CDS             856..1857
                     /locus_tag="VIQ50_00620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEY9358905.1"
                     /translation="MPTPAHLPFEALYSALKAAAEATRLRILALLGEAELTVSDLTAI
                     LRQSQPRISRHLRLLAEAGLVERFREGSWAFFRLAERDGAANLARELIARLDPEDVTL
                     ARDRERLAAVRAQRADAAQNYFRRHAAQWDRIRKLHVADEAVEAAIVRALSDAPVRTL
                     LDLGTGTGRMLELLGPQIERGLGLDLSLDMLSLARARLDRAGLRHCSVRQGDIYDLAL
                     PKDSFDAVIIHQVLHFLEDGARAIKEAARVLRPAGRLLVVDFAPHDLEFLRDEHAHRR
                     LGFANDTVAQWMKAAGLDVVLQQSLAPEPASEGKIAVSLWLGRDPRLVLAAPALEVA"
     gene            1857..>2651
                     /gene="metF"
                     /locus_tag="VIQ50_00625"
     CDS             1857..>2651
                     /gene="metF"
                     /locus_tag="VIQ50_00625"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018045190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase [NAD(P)H]"
                     /protein_id="HEY9358906.1"
                     /translation="MTAEPRASRFVRPRGDGEARRIRVSFEFFPPKTEEMEKTLWESI
                     TRLAPLEPNFVSVTYGAGGSTRERTHATVKRILAETALAPAAHLTCVAATREEIDAVI
                     RSYCGAGVRHIVALRGDPIGGIGERYAPHPGGYHNGADLVAGIKRLSDVEVSVSAYPE
                     KHPDSPTVEADLDMLAAKVDAGAARAITQFFFENDLYFRYLERVRARGIDVPIVPGIL
                     PVQNFKQTKAFAARCGASVPDWLAERFDGLDEDAATRKLIAAAVAAE"
BASE COUNT          435 a          911 c          848 g          457 t
ORIGIN      
        1 gcgggggtgt cggggttcaa aatgcttgcc cagaattaat cctccggcgt ggttaccggc
       61 cgaccgccga tttataagct gttgatatta aatgattata cgcatttgcc gcagcgcagt
      121 gaaattcccg tgatcgcagc cgaccccggg ggcggcaagg ggccgaaagg ggtcataata
      181 ccggcgccgg ccaagaccca cttattgccg ccccgcgtgc cagcccacca ccgcgtccgc
      241 gacggcatcg gtggaggcaa aataaggctt gatgtctagg aggggggtgt tgtcgaggca
      301 gtcgaggccc acgaccgaaa gcgttgtgcc ttccacgccc accagccgca ccacgctcat
      361 ggcgatgggg ttgggccggg cgggagatcg caacgcaaag gtgccacgac cgacgccgta
      421 gtgccgcggg acctggagca ccagatcgcg ccgcgaccgg ttcatccaat aaagcacgac
      481 cagatggctg caggtctcga ccccggcgag cgcctcggcc cagcgcgcat cgaccgcgat
      541 ggtgcagacc gcgtcggatt cacgcgcatt tttcgggcat tcctcgcgcc gcgtccacgg
      601 cgtgcggatg tgaccgatga agtagagcga ggcgtcgaat ttgtccggca ggtcgatggc
      661 aacctcgccg tctcggatgc cgaaggcttt gtcgttcatg ggtcccacca aggcgtctcg
      721 gcaccgaaca tggcttggcc gggcccgccc ggcaacgagg ggagcggccc accgccttgc
      781 aattgtcgct taagggtata aacatatctt tatatgctgg ccgccatcga gccaaatgga
      841 ccgccgccca cgttcatgcc cacgcctgcc catctgccgt tcgaggcgct ctatagcgcg
      901 ctcaaagccg ccgccgaggc tactcggctg cgcatcctgg cgcttctcgg cgaggccgaa
      961 ctgacggtct ccgatctcac tgccattttg cgccaatcgc agccgcggat ctcgcgccat
     1021 ctgcggcttc tcgccgaggc ggggctggtc gaacgcttcc gcgaaggctc gtgggccttc
     1081 tttcgcttgg ccgagcggga tggggccgcc aatcttgccc gcgagcttat tgcccgcctc
     1141 gatcccgagg atgtgacgct cgcgcgcgat cgggagcgcc tcgccgcggt gcgcgcccaa
     1201 cgcgccgacg cggcgcaaaa ctatttccgc cggcacgcgg cgcagtggga ccgcatccgc
     1261 aagctgcacg tcgccgacga ggccgtcgag gcggcgatcg tgcgcgcgct ttccgacgca
     1321 ccggtgcgca cgctgctcga tctcggcacc gggaccgggc gcatgctcga actgctcgga
     1381 ccgcagatcg agcgcggcct cggcctcgat ctctccctcg atatgctctc gctcgcccgc
     1441 gcgcggctcg accgcgccgg attgcgccac tgcagcgtgc gccagggcga tatctatgat
     1501 ctcgcgctgc ccaaggacag tttcgacgca gtcatcatcc accaggtgct gcacttcctc
     1561 gaagacggcg cgcgcgccat caaggaggcg gcgcgcgtac tgcggcctgc cggccggctg
     1621 ctggtggtcg attttgctcc gcacgatctt gaatttctgc gcgacgagca cgcccatcgc
     1681 cgcctcggct ttgcgaacga caccgtggcg caatggatga aggcggccgg cctcgacgtc
     1741 gtgctgcagc agagccttgc gcccgaaccc gcctccgaag gcaagatcgc cgtctcgctc
     1801 tggctcgggc gcgatccccg cctcgtgctt gccgcgccgg cgctggaggt tgcctgatga
     1861 cggccgaacc ccgcgccagc cgtttcgtgc gaccgcgcgg cgatggcgaa gcgcgacgca
     1921 tccgcgtctc cttcgagttc ttcccgccga agacggagga aatggaaaag acgttgtggg
     1981 aatcgatcac acgccttgcg ccgctcgagc caaatttcgt ctcggtcacc tacggcgccg
     2041 gcggatcaac gcgtgaacgc acgcatgcga ccgttaaacg cattctggcc gagaccgcgc
     2101 tcgccccggc ggcgcatctg acttgcgtcg ccgcaacgcg cgaggagatc gatgcggtga
     2161 tccgcagtta ttgcggggct ggcgtgcgtc acatcgtggc gctgcgcggg gacccgatcg
     2221 gcggcatcgg cgagcgctat gccccgcatc ccggcgggta ccacaacggc gctgatctgg
     2281 tcgccggcat caagcgcctc tcggacgtgg aggtgtcggt ctccgcctat ccggaaaaac
     2341 atccggacag tccgacggtc gaggccgatc tcgacatgct cgcggccaag gtcgacgccg
     2401 gcgccgcgcg tgcgattacc caattcttct tcgagaatga tctctatttc cgttatctcg
     2461 agcgcgtgcg cgcccgcggc atcgacgttc ccatcgtgcc cggcatcctg ccagtgcaga
     2521 attttaagca aaccaaggcc ttcgcggcgc gttgcggcgc ctccgtgccc gactggctcg
     2581 ccgaacgctt cgacggcctc gacgaggatg cagcgacccg caagctcatc gccgccgcgg
     2641 tcgctgccga g
//
LOCUS       DATCWM010000034         2366 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_496946, whole genome shotgun sequence.
ACCESSION   DATCWM010000034 DATCWM010000000
VERSION     DATCWM010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2366
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_496946"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..527)
                     /locus_tag="VIQ50_00630"
     CDS             complement(<1..527)
                     /locus_tag="VIQ50_00630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9358907.1"
                     /translation="MAGCFKRSASLVLAMLLAACLSACGGGAGNPSSVGSSFWSSATS
                     LLSRSTKVAVAPIIGTPPQVATDLTDALVAAGKDRNLTLIPGGSGGNYTLRGYLVATS
                     ERGGAKISYIWDVTDAQGGRVARVSGDEMISGHASGDPWAAIDSATLRSIAGKTTSQL
                     AATLSRGGGGAPSAVA"
     gene            complement(711..1496)
                     /gene="pgeF"
                     /locus_tag="VIQ50_00635"
     CDS             complement(711..1496)
                     /gene="pgeF"
                     /locus_tag="VIQ50_00635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019904991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HEY9358908.1"
                     /translation="MVTPDKMMVCGSSLAAIDGVRHGFFTRQGGVSSGVYASLNCGPG
                     SRDDAANVAENRARVAEILGVKPDRLLSLSQQHSAEALTLKKPWDAAKQPQADAMVTA
                     TPGLALGVLTADCAPVLFADGEAGVIGAAHAGWRGALSGIIEATVEAMEKLGAKPERI
                     TAVIGPAISQKAYEVGSDYVERFLAEEPGSEAFFITDEGSGEPHFDLPGYVAERLARA
                     GIGSIADLGLCTYCEETRLFSYRRSQHHGEEDYGRQISAIVVA"
     gene            complement(1517..>2366)
                     /locus_tag="VIQ50_00640"
     CDS             complement(1517..>2366)
                     /locus_tag="VIQ50_00640"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEY9358909.1"
                     /translation="AELGPGRGTLMADALRACRSGPKFLQSVTMALVETSPSLRETQR
                     TSLSGSPAPLHWYQSIDDLPEGPLILIANEFIDALPVRQFVRKGGVWRERCVAIDRNG
                     KFVFAPGEAVEDGNLPEAALAVDAPDGAIFETRPAVSPPLAALAARAAIAPVTALFID
                     YGHEQTGFGDTLQAVSRHKYADPLAAPGEIDLTAHVDFAELKRSATALGFATYGPIPQ
                     GEFLLKLGLEARRDRLLREARPDQREAIMSGAARLADPRAMGVLFKVLVLASCGLACP
                     PPFGEI"
BASE COUNT          408 a          776 c          775 g          407 t
ORIGIN      
        1 gccaccgcac ttggcgcgcc gccgccgcct ctcgacaatg ttgctgcgag ctgtgaggta
       61 gtcttgccgg cgatgctcct gagggtcgcg ctgtcgatgg cagcccaagg atcgccgctc
      121 gcgtgcccgg aaatcatctc gtcaccggag acgcgcgcta cccgtccgcc ctgggcgtca
      181 gtcacatccc agatataaga gatcttcgcg ccgcctcgct cgctcgtcgc gacgaggtag
      241 ccgcgcaagg tgtagttgcc accgctgcct ccggggatga gcgtaagatt gcggtctttg
      301 ccggcggcaa ccagcgcatc ggtaagatcc gtcgccactt gcggaggggt gccgatgatc
      361 ggagcgaccg cgaccttggt cgagcggctg agcagactgg tcgcgctgct ccagaaactt
      421 gagccgacgc tgctcgggtt tcccgcgccc ccgccgcagg cgctgaggca ggcggcaagg
      481 agcatggcga ggaccagcga tgcactacgc ttgaagcagc cggccatgtg tcgtgagtcc
      541 gcgcccaaca aaacgctccc tctgttggcc gcacagcacc gctcgcgaca gatctgtcgt
      601 gacgggactc tcaacccttt ccctcacaac agattacctg cgccagcccg ctcgcgtcca
      661 gttttagcgt gtatcggctt cccgcccaaa agcagtatgg tgaataggag tcaggcaacc
      721 acgatggcgg aaatttggcg gccgtagtcc tcttcgccat gatgttgcga ccgccgatag
      781 gagaacagcc gcgtttcctc gcaataggtg caaagcccga gatcggcgat gcttccgatg
      841 ccggcgcggg cgagccgctc ggcgacgtag ccgggcaggt cgaaatgcgg ctcgcctgag
      901 ccttcgtcgg tgatgaaaaa cgcctcgctg cccggctcct cggcaaggaa gcgctcaaca
      961 tagtcggagc cgacctcgta ggctttctga gagatggcgg gtccaatcac ggcggtgatg
     1021 cgctctggct tcgcgccgag cttttccatc gcctcgaccg tcgcttcgat gatgcccgac
     1081 agtgcgccgc gccagccggc atgggccgcg ccgatgacgc ccgcctcgcc gtcggcaaag
     1141 agtacgggcg cgcaatccgc ggtcaacacg ccgagcgcga gaccgggcgt tgccgtgacc
     1201 atggcgtcgg cctgcggttg tttcgcggca tcccatggct tcttgagggt cagggcttcg
     1261 gcgctgtgct gctgcgatag cgagagcaaa cggtcgggtt tgactccgag gatctcggcg
     1321 acgcgcgcgc ggttctcggc aacgttggcc gcgtcgtcgc gcgatccagg cccgcaattg
     1381 agggaggcat agacgccact cgagacgccg ccctggcggg tgaagaatcc gtggcgtacg
     1441 ccatcgattg ccgcaaggct cgagccacag accatcattt tgtcaggcgt aaccatgaaa
     1501 ggaagctgcc cagcagctaa atctctccga agggcggcgg acaggcaagt ccgcagcttg
     1561 caagcacgag caccttgaac agaactccca tcgcgcgcgg atcggccagc cgtgcggctc
     1621 ccgacatgat cgcctccctc tgatcgggcc tcgcctcgcg aagcaatctg tcgcgccgcg
     1681 cttcgagccc gagcttgagc aggaattcgc cttgcggtat cgggccatac gtggcgaacc
     1741 cgagtgccgt ggctgatcgc ttaagctcgg cgaaatcgac atgggcggtg aggtcgatct
     1801 cacctggcgc agcaagcggg tcggcatatt tgtgacgaga gacggcctgc agcgtgtcgc
     1861 cgaagccagt ctgctcgtga ccgtaatcga tgaacagcgc cgtgaccggc gcgatcgccg
     1921 cgcgcgcagc cagagcggcg aggggcgggc tgacggcggg tcgcgtctcg aagatcgcgc
     1981 cgtcgggagc atcgaccgca agcgccgcct ccggcaggtt gccatcttcg accgcttctc
     2041 ccggggcaaa tacgaacttg ccgttgcggt ctatagcgac gcagcgctcg cgccacacgc
     2101 ctcccttccg cacgaattgc ctcaccggca gagcgtcgat gaactcgttg gcgatgagga
     2161 tgagcggccc ttcgggcagg tcgtcgatgc tctggtacca gtggagcggg gcaggggacc
     2221 cgctgaggct cgtgcgctgc gtctcgcgca agctcgggct cgtctcgacc agtgccatgg
     2281 tgacgctctg gagaaatttc ggcccgctcc gacaggcgcg cagcgcatcg gccatgagcg
     2341 tgccgcgccc aggtccaagc tccgcg
//
LOCUS       DATCWM010000035         3168 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_410569, whole genome shotgun sequence.
ACCESSION   DATCWM010000035 DATCWM010000000
VERSION     DATCWM010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3168
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_410569"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(16..936)
                     /locus_tag="VIQ50_00645"
     CDS             complement(16..936)
                     /locus_tag="VIQ50_00645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019964861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9358910.1"
                     /translation="MSRDQLMPVGSDRGLQGAATPPPAPSASSGADRIAATSPAPPIL
                     SVNNIEVVYDHVILVLKGVSLAVPKGQIVALLGANGAGKSTTLKAISNLLSAERGEVT
                     KGSIVFDGEEVHARSPNELVRRGCIQVMEGRHCFAHLSVEENLLTGAFTRGGAGAAVR
                     RDLELVYSYFPRLKERRGATAGYISGGEQQMCAIGRALMSRPKMILLDEPSMGLAPQL
                     VEEIFKIVGDLNVKEGVSFLLAEQNTRMALKYARYGYVLENGRVVLDGDAKALGENED
                     VKEFYLGIAEGQRKSFREGKHYRRRKRWLA"
     gene            complement(918..2252)
                     /locus_tag="VIQ50_00650"
     CDS             complement(918..2252)
                     /locus_tag="VIQ50_00650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011993137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9358911.1"
                     /translation="MTGTTITGKHAGIALAVLVGGLAMAAPALAQNEQFIPHLVYRTG
                     AYAPNGVPFANGIADYYKLINERDGGINGVKIAWEECDTGYATDRGVECYERLKGKGP
                     TGAAYVVPLSTGITFALTEKAPIDKIPIISMGYGRSESRDGSVFQWNFPLLGTYWTAA
                     DIILQHIAKKEGGFDKLKGKKIALVYHDSPYGKEPIALLQKRAQMHGFETLLLPVTHP
                     GVEQKATWLQIRQNRPDYVLLWGWGVMNSTAIKEAVAVGYPREKMYGVWWSGAEPDVR
                     PAEDGATGYNSAALQHTSGRFKVHDDLKKYVYDKGQGTARWEDTGEVLYVRGLINAML
                     GIEAIRTAQERFGKKPMTGEQVRWGLENLNVTAERLKQLGFENQLKPIKVSCEDHEGA
                     RTGPIQTWDGKDWKISSDWYTSDDSVIAPMVKEAAAKYAAEKKITPGCLVTN"
     gene            complement(2357..>3168)
                     /locus_tag="VIQ50_00655"
     CDS             complement(2357..>3168)
                     /locus_tag="VIQ50_00655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016840290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9358912.1"
                     /translation="VGAYAAYNVALRLPQTNIILVFLFAGVMAMLVGILFGLPSLRIK
                     GFYLAVATLASQFFLEWAFARVKWFTNYAPSGSVAVGRIELFGMAIDTPAKTYIFVLA
                     MTVVLALAAKNLVRGRMGRMWMAMRDMDIAAEIIGIRPLHAKLSAFAVSSFYIGVAGA
                     LWGFLRLGSWEPLAFDVNRSFQVLFMIIIGGLGTILGSFLGAAFIVLMPIFLNQLPAW
                     LGIAMSTAMISHIEFMLFGAIIVLFLIVEPHGLARLWAIAKEKLRLWPFPY"
BASE COUNT          583 a         1035 c          979 g          571 t
ORIGIN      
        1 cggccggggc aacgtctacg ccagccagcg cttgcgtcgc cggtaatgct tgccttcgcg
       61 gaacgacttt cgttggccct cggcgatgcc gagataaaac tccttcacgt cctcgttctc
      121 gcccagcgcc ttggcgtcgc catcgagcac cacacggccg ttttccagca cgtagccgta
      181 tcgcgcgtat ttcaacgcca tgcgggtatt ctgctccgcg agcaggaacg aaactccttc
      241 cttgacattg aggtcgccga cgatcttgaa aatttcctcc acgagttgcg gcgccagccc
      301 catcgagggc tcgtcaagca ggatcatttt cggtcgagac atcagcgcgc gcccgatcgc
      361 gcacatctgc tgctcgccgc cagagatgta gccggcggta gcgccgcggc gttccttgag
      421 ccgcggaaaa taggagtaga cgagctcgag gtcgcggcgt acggccgcgc cggcgccgcc
      481 gcgcgtgaac gcgccggtca agaggttctc ctcgaccgag aggtgcgcga agcaatgacg
      541 gccttccatg acctggatgc aaccgcgccg caccaactcg tttggcgagc gcgcatgcac
      601 ctcctcaccg tcgaatacga tggagccttt ggtcacttcg ccgcgctcgg cggacagaag
      661 attggaaatc gctttcaacg tggtggactt gccggcgcca ttcgcgccca ggagcgcgac
      721 gatctggccc ttgggaaccg caagcgacac gcccttgagc acgaggatga cgtgatcgta
      781 caccacctca atattgttga ccgagaggat cggcggcgca ggtgatgtcg ccgcaatgcg
      841 atccgccccc gaggacgcac tgggagcagg aggcggcgtc gccgccccct gcaagccgcg
      901 atcggagcca accggcatca gttggtcacg agacacccgg gcgtgatctt cttttccgcc
      961 gcgtatttgg ctgcggcctc cttgaccatc ggtgcgatca cgctgtcgtc gctggtgtac
     1021 cagtcggacg agatcttcca gtccttgcca tcccaggtct ggattggtcc ggtgcgcgcg
     1081 ccctcatggt cctcgcacga caccttgatc ggctttaact gattctcgaa gccgagctgc
     1141 ttgagccgct ccgcggtcac attgaggttc tcgaggcccc agcgcacctg ctcgccggtc
     1201 atcggcttct tgccgaaccg ctcctgcgcg gtacggatcg cctcgatgcc gagcatggca
     1261 ttgatcaatc cacgcacata gaggacctcg ccggtatcct cccatcgcgc ggtgccctgg
     1321 cccttgtcat agacgtactt cttgagatcg tcgtgcacct taaagcgccc ggaggtgtgc
     1381 tgcagtgcgg ccgaattgta tcccgtggca ccatcttcgg ccgggcgcac gtccggctcg
     1441 gcacctgacc accacacgcc gtacatcttc tcgcgcggat agccgacggc gaccgcctcc
     1501 ttgatggcgg tcgaattcat tacgccccag ccccagagca gcacgtagtc gggacggttc
     1561 tgccggatct gcagccaagt cgctttctgc tcgacgccgg gatgggtgac cggcagcaac
     1621 agcgtctcga agccgtgcat ctgcgcgcgc ttttgcagga gcgcaatcgg ctccttgccg
     1681 tagggcgagt cgtgatagac cagcgcgatc ttcttgccct tgagcttgtc gaagccgcct
     1741 tccttcttgg cgatgtgctg caggatgatg tcggcggccg tccaataggt gccgagcagc
     1801 gggaaattcc actggaagac cgagccgtcg cgcgactccg agcggccgta gcccatggag
     1861 atgatcggga tcttgtcgat cggcgccttc tccgtcagcg caaaggtgat gccggtcgag
     1921 agcggcacga cataggcggc gccggtggga cccttgccct tgaggcgctc gtagcattcc
     1981 acgccgcggt cggtggcgta gccggtgtcg cattcctccc acgcgatctt caccccattg
     2041 atgccgccgt cgcgctcgtt gatgagcttg taatagtccg cgatgccgtt ggcgaatgga
     2101 acgccgttcg gcgcgtaggc gccggtccga tagaccaagt gggggatgaa ctgctcgttc
     2161 tgcgccagcg ctggcgcagc catcgctagc ccgcccacca gcaccgcgag cgcaatcccg
     2221 gcgtgttttc cagtgattgt cgtaccagtc atggggattc ctccatcgac gggccggtcc
     2281 gggccgttgc cggccggctg attgcggggt tctaccccgc ctctgggcac gagtgtgccc
     2341 gcgaattgtc gcggcctcaa tacgggaacg gccacagacg aagcttctcc ttggcgatcg
     2401 cccagagccg cgcgagcccg tgcggctcga cgatcaggaa caacacgatg atcgccccga
     2461 acagcatgaa ttcgatatgc gagatcatgg cggtcgacat cgctatgccg agccatgccg
     2521 gcagctggtt gagaaagatc ggcatcagca cgatgaaggc ggcgccgagg aaggacccca
     2581 ggatggtgcc gagcccgccg atgatgatca tgaacagcac ctggaacgag cggttcacgt
     2641 cgaaagccag cggctcccac gaacccagcc gcaggaaacc ccacagcgcg cctgcgaccc
     2701 cgatatagaa cgacgacaca gcgaaggcgg agagcttggc atgcagtggc cggataccga
     2761 tgatctcggc cgcgatgtcc atgtcgcgca tggccatcca catgcgtccc atccggccgc
     2821 gcaccaggtt cttggcggcc agcgcgagga ccaccgtcat cgccagcacg aagatataag
     2881 tcttggccgg ggtatcgatc gccatgccga acagctcgat ccggccgacc gcgaccgagc
     2941 cggacggcgc gtagtttgtg aaccatttga cgcgcgcgaa ggcccattcg aggaagaact
     3001 gcgaagcgag cgtcgcgacc gcgaggtaga aacccttgat gcgcaacgag ggaagcccga
     3061 acagaatgcc gaccagcatc gccatgacgc cggcgaacag aaataccaag atgatgttgg
     3121 tctgcggcag ccgcagcgcc acattgtagg cggcgtaggc gccgaccg
//
LOCUS       DATCWM010000036         7771 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_243243, whole genome shotgun sequence.
ACCESSION   DATCWM010000036 DATCWM010000000
VERSION     DATCWM010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7771)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7771)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7771
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_243243"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..317)
                     /locus_tag="VIQ50_00660"
     CDS             complement(<1..317)
                     /locus_tag="VIQ50_00660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9358913.1"
                     /translation="MLRTMVIAAAVTSALVAAALTPTIAIARGGHGGGGHGGGHGGGH
                     AGGHAFHGGFHGAGPVHGGFRSVAHFGHVGRFHHVAHFRRGFRGSGVYAYYGDYSCWR
                     WLP"
     gene            558..770
                     /locus_tag="VIQ50_00665"
     CDS             558..770
                     /locus_tag="VIQ50_00665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9358914.1"
                     /translation="MLLIAYYVVFMILGDLAAYAIGLVTELEFGGYVSLIVFLTLYFL
                     FLWVAWVVAVWLTKPKLDEPQSARSV"
     gene            complement(822..2177)
                     /locus_tag="VIQ50_00670"
     CDS             complement(822..2177)
                     /locus_tag="VIQ50_00670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY9358915.1"
                     /translation="MISFKSIFSRIIFLHVIALVITAIVMPVVLYWFFKWAANDLHDQ
                     AMRDQAQLVAHYLVLQADGTWTLDLPPALEDIYSQAVGRYAYAVVDDAGRVLLSSSDD
                     RSAIFADDPRSSDIAYLETRRGKAAISGVSLLKEVDGRKVWVQVGEDLAHRDVIVDDI
                     VADFFKRVGWITLPVLLSLLAIDIVIFRRALRPLLNASELAKKINPRRTDIRLPIEQM
                     PKEILPLVQAVNQALDRLEAGFRVQREFTADAAHELRTPLTILRSRVDTLADRGTSKA
                     LHKDIEGMARVVNQLLDIAELEILSIDPLEKADLHAICAEVAEFAAPLALAQGKNIAL
                     SESDAAVWVNGNPEMLSRAIRNLVENAINYSPPGTTVEIVVEDSGMVRVLDEGPGIKE
                     DERELIFQRFWRRDRRRTEGAGLGLSIVRRIADTHAATISVENRPTGGATFSLRFARI
                     A"
     gene            complement(2323..3003)
                     /locus_tag="VIQ50_00675"
     CDS             complement(2323..3003)
                     /locus_tag="VIQ50_00675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008130781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY9358916.1"
                     /translation="MRLLLVEDNEELAQLLIQRLSVAGYETDLLTTASEAQAAVATTR
                     YAAMVLDLSLPDGDGLSILREIRQREDPLPVLVLTARSGLQDRVSGLRSGADDYLVKP
                     FAFEELLARLEALLRRPGQLLGRALQIANLAFDTESRQAFIDDKPQLLSARETAVLEL
                     LMRRKDRVVSKKLVEDHIFGLSGDVASNAVEVYIHRLRKQLSDRGAKVQIHTIRGVGY
                     LISEEKAA"
     gene            complement(3056..6202)
                     /locus_tag="VIQ50_00680"
     CDS             complement(3056..6202)
                     /locus_tag="VIQ50_00680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CusA/CzcA family heavy metal efflux RND
                     transporter"
                     /protein_id="HEY9358917.1"
                     /translation="MNGIVAFSLKHRGLVVLLFMLVLFGGVLAFRELNIEAYPDPTPP
                     MVDVITQSPGLSAEEIERYITIPIEAQIAGLRNLTSIRTISLYGLSDVKLQFSFEFTY
                     DQALQQVLNRLAQIPPLPNNAQPQISPVSPIGEIYRYRLVGPPGYSVLDLKTLQDWML
                     QRRFRAVPGVIDVIGWGGKTKTFELEVDFNKLIAYGITLPQLLQALNNSNINVGGNTV
                     NIGPQAAVVRGVGLIRSADELSNTMLTQSGGNPVLVRDVATVQVGNKPRLGIAGKDAD
                     DDIVQGIVLMRRGEQSMPTIKRVEREVERINNSNILPPGVRIERIYDRKELIDITTRT
                     VLHNMAFGILLIFALQWVFLGNLRTALIVAATIPFALFFAVGILVLRGESANLLSVGA
                     IDFGLVVDGTVIMVESIYRRLGVAAAVTGAVSAAEGLSGKLSAIFLAASDVNRSIFFA
                     AGIIIAGFLPLFTLSGVEGHIFAPMAKTYAYALAGGLLATFTVTPAISAMLLPEHVTE
                     TETWIVRALHRVYAPALRLAVDNRVLTIAGAIAVLLVAGLAIRSLGLEFLPKLEEGNL
                     WIRATMPSTISLEEGNGYVNRMRNVIGSFPEVESVVSQHGRPDDGTDAAGFFNAEFFA
                     PLKPMSQWRAGLDKEALTIQILRKLEADFPGVEFNFSQYLQDNVAEAVSGVKGENSIK
                     LFGNDLQALTDTANRIKAVLATVPGITDLAVFTSLGQPTVQIEIDRARAARYGLAPGD
                     INATIRTAIGGESAGDLYEPGSDRHFPIVVRLAPQFRQNPEAIQNLRIGAQGPSGVTQ
                     IPLNEVASVKLVSGPSYIYREGQERYLPIKFSVRDRDLGSAIQEAQRKVAQQVQLPAG
                     SRLEWVGEFGNLQDAIARLKVVVPITLALIALLLWINFGSMADTLLAMSVIPMAVVGG
                     VFALFLLHVPFSVSAAIGFIALFGISVMDGIIILSQFNQLIDSGVERTTAILRTGELQ
                     MRPVLMTCVIAGVGLLPAALSTGIGSQVQKPLAVVVVGGMTLAPLVILITLPVLILLF
                     SRRVTRPAPEQAMPAPAE"
     gene            complement(6199..7440)
                     /locus_tag="VIQ50_00685"
     CDS             complement(6199..7440)
                     /locus_tag="VIQ50_00685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018456900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY9358918.1"
                     /translation="MQVLVVAVLVFAAGAGVWVAKSRTNSDVRDPDRAALSPSKKGAG
                     VFYPTAAQWATLTVEPVQQRVFRAEHVTEGKIAVDEDRSTPIFSPYAGRVLKLFVKPG
                     DTVTVGQPLFTVQAADMVQAQNDFISAATALNKARSAQNLAEIIDKRQRLLYEGKAVP
                     LKEVQNARAALDAAENDVRSADVALEAARNRLRILGKTDQEITDFQEKGTIDPSTLIT
                     APIAGTIVQRKVGPGQYVGSGQSDPVFIIGDLSTVWIVAYIRETEAPLVHVGQPIYFT
                     VLAYPDRAFPASISYVAAALDPTTRRLLVRATVNNAEGLFKPEMFASVKILTGEGDNA
                     VAVPRDAIIHEGDTARVWVVREKDDEKAIELRRIKVGLTNGNLVEALKGLGPGDRVVT
                     KGSLFIDRVASSAEAVPKAAP"
     gene            7574..>7771
                     /locus_tag="VIQ50_00690"
     CDS             7574..>7771
                     /locus_tag="VIQ50_00690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9358919.1"
                     /translation="MNGAGHAIDFAGAILEKLATANAKKAFRPHGKSAAWAVTLALPI
                     RSDPQHRATPFRTTGTICGYGY"
BASE COUNT         1477 a         2461 c         2419 g         1414 t
ORIGIN      
        1 cttggaagcc aacgccagca actataatcg ccgtaatagg catacacgcc cgagccccga
       61 aagccgcggc ggaaatgcgc gacatgatgg aagcggccga cgtgaccgaa gtgagcaacg
      121 ctgcggaaac cgccatggac ggggccggcg ccgtggaagc cgccatggaa ggcgtgaccg
      181 ccggcatgac cgccgccgtg tcctcccccg tgccctccac caccgtgtcc gccgcgagcg
      241 atcgcgatcg tcggtgtgag agctgctgcg acaagcgcgc tcgtgacggc ggctgcgatg
      301 accattgttc gaagcatggt gctgtctcct cttcggccat ccacccgcag caatgctaat
      361 gccggcggct gaaccggggc tgaatgcccg atcacggctg cgtgagccgc gccgccttcg
      421 gcacctcgcc gtcaggtctg tgtaagcaaa gtagtgaaga atacggttgc gcggcgaaac
      481 gcgctccgcg ccgcgtgcca ggcagcatcg gccacagctc ggcggcggtt cacattgtcc
      541 gatcgaaggg attcatcgtg cttctcatcg cctattacgt cgtcttcatg atcctcggcg
      601 atctcgccgc ctacgccatc gggctcgtaa ccgaactcga gtttggcggc tatgtgagcc
      661 tcatcgtctt ccttacactc tattttctgt tcttgtgggt cgcttgggta gtcgcggtat
      721 ggctgacgaa acccaagctc gacgagccgc agagcgcccg atccgtctga gatgcaaagc
      781 cacagtgcgg aagaagcgcg cctcgagcac gcaattttgc gctaggcgat acgagcaaag
      841 cggagcgaga acgttgcacc gccggtcggc cggttctcga cgctgatggt tgcggcgtgg
      901 gtatcggcga tgcgccggac gattgaaaga cccaaacctg cgccctctgt ccgccgtcga
      961 tcgcgccgcc agaaccgttg aaagatcaat tcgcgctcgt cctccttgat tccaggcccc
     1021 tcatcgagga cgcgcaccat gccgctgtcc tcgacgacga tctccactgt cgtcccaggc
     1081 ggcgaatagt tgatcgcatt ctcgaccaga ttacggatcg cccgcgagag catctccgga
     1141 ttgccgttga cccacacggc tgcgtcgctc tcgctcaaag cgatgttctt gccttgtgcc
     1201 agcgccagcg gcgcggcgaa ctccgccacc tcggcgcaga tcgcgtgcag atcggccttc
     1261 tccaggggat cgatcgacaa aatctccagc tccgcgatgt cgagcagctg attgacgacg
     1321 cgcgccatgc cctcgatatc tttatgcagg gccttggatg tccctcgatc ggccaaggtg
     1381 tcgacgcggc tgcgcaagat ggtcagcggc gtgcgcaatt catgcgccgc atcggcggta
     1441 aactcccgct gcacgcggaa tccggcctcg agtcgatcga gcgcctgatt cacggcctgt
     1501 accaggggca ggatttcctt cggcatctgc tcgatcggta gacggatatc cgttctgcgc
     1561 ggattgattt ttttcgccaa ttccgaagca ttgagcagcg gccgcaatgc ccggcggaaa
     1621 atcacgatgt caatcgccag cagagacagc agcaccggca gggtgatcca tcccacgcgt
     1681 ttgaaaaaat cggcgacgat gtcgtcgacg atgacatcgc ggtgtgcgag atcctcaccg
     1741 acctgcaccc ataccttacg tccatccacc tccttcagca ggctgacacc cgagatggcg
     1801 gctttgccgc ggcgcgtttc gaggtacgcg atgtcggaag agcgcggatc gtcggcgaat
     1861 atcgctgatc gatcatcgga cgaggataac agaacccggc cggcgtcatc gaccaccgca
     1921 taggcgtatc gtcccaccgc ctgcgagtag atgtcttcga gcgcgggcgg cagatcgagg
     1981 gtccaggtgc cgtccgcctg taacacgaga taatgcgcaa ccagctgcgc ctggtcgcgc
     2041 atggcttgat cgtgcaggtc gttcgccgcc catttgaaga accaatagag caccaccggc
     2101 atcacgatag cggtgatcac cagcgcgatg acgtgcaaga agatgatccg ggagaagatc
     2161 gacttgaacg aaatcatgac ggtgctttca atccgtcagt gcggcccagg cgcgatggcg
     2221 acgagagccg ggatccgtaa agcaccgccg gcgccaatgg actccgtcct cgcgcgcttc
     2281 gcacgtgccg caatgacgaa ccgggacgca aggcggctct tctcacgccg ccttttcctc
     2341 ggaaatgagg tagccgacgc cgcgaatggt gtggatttgc accttggccc cgcggtcgga
     2401 cagttgcttg cgcaggcgat ggatgtagac ctcgaccgca ttggacgcaa cgtcacccga
     2461 cagcccgaaa atgtgatctt cgaccagctt cttcgagacg acgcggtcct tgcggcgcat
     2521 cagcagttcg agcacggccg tttcgcgggc ggagagaagc tgcggcttgt catcgatgaa
     2581 tgcctgccgg ctttcggtat cgaatgcgag gttggcaatt tgcagtgcgc gcccgagcag
     2641 ttggccgggg cgtcgcagga gcgcctccag ccgcgccaac agctcctcga acgcgaacgg
     2701 cttgacgaga taatcatccg caccgctgcg caggccgcta acgcgatctt gcagtccgct
     2761 gcgggcggtg agcaccagaa ccggaagtgg atcctcgcgc tgacgtattt cgcgcaggat
     2821 cgacagcccg tcgccgtccg gcaaactgag atcgagaacc atggcggcat aacgcgtcgt
     2881 cgcgacggct gcctgcgcct cggacgccgt ggtgagaaga tcggtttcgt accctgcgac
     2941 gctcagacgc tgaatcaaaa gctgcgcaag ctcttcgttg tcctcgacca gcagcaatct
     3001 cattcgcaag cgctccgatc gatgccgcgc gtgcgaaccc gcacgtcgat ggcggtcact
     3061 ccgccggcgc gggcatcgcc tgttctggcg ccggccgcgt tacccggcgc gagaacaaga
     3121 gaatgagcac gggaagcgtg atcagaatga cgagcggcgc caacgtcatg ccgccgacca
     3181 ccaccacagc cagcggcttc tgcacctgcg agccaatgcc ggtggacaat gccgccggca
     3241 acagtccaac gccggcaatc acgcaggtca tcagcaccgg gcgcatctgc agctcgccgg
     3301 tgcgcaggat cgcggtggtt cgctcgaccc ccgagtcgat cagctgattg aattgcgaca
     3361 gaatgatgat accgtccatc accgaaattc caaacagcgc gatgaagccg atcgcggcgg
     3421 agacgctgaa agggacgtgc aacaagaata acgcgaatac gccgccgacc accgccatcg
     3481 ggatcacgct catggccagc agcgtgtccg ccatcgagcc gaaattgatc cacagcagaa
     3541 gcgcgatcaa agcaagcgtg atcggcacca cgactttgag ccttgcgatc gcatcctgca
     3601 gattgccgaa ttcgcccacc cattcgaggc gtgagcccgc cggcaattgc acctgttggg
     3661 caaccttacg ttgcgcctcc tggattgcgc tgccgagatc gcggtcacgc acgctgaact
     3721 tgatcggcaa gtagcgttcc tggccctcgc gatagatata ggagggaccg gacacgagct
     3781 tgacgctggc gacttcgttg agcggaatct gcgtgacgcc gctcggcccc tgcgcaccga
     3841 tgcgcaggtt ttggatcgct tccgggttct gcctgaattg cggggcgagc cgcaccacga
     3901 tggggaagtg ccggtcgctg cccggctcgt aaaggtcgcc ggcggattcg ccgccgatgg
     3961 cggttcgaat tgtggcattg atgtcgcccg gagcgagacc atagcgcgcc gcccgcgccc
     4021 gatcgatctc gatctgcacc gtcggctggc cgagcgatgt gaagacggcg aggtcggtaa
     4081 tgccgggcac cgtggcgagc accgccttga ttctgttggc ggtgtcggtc agcgcctgca
     4141 aatcgttgcc gaacagcttg atcgaattct cgcctttgac gccggacacc gcctcggcga
     4201 cgttgtcctg cagatattgc gagaagttga attcaacccc ggggaaatcg gcctcgagct
     4261 tgcgcaggat ctggatcgtg agagcctcct tatccagacc agcgcgccat tggctcatcg
     4321 gcttcaaggg cgcgaagaat tccgcattga agaagccggc ggcatcggtg ccgtcgtccg
     4381 gacgcccgtg ctgcgagaca acggattcga cttcgggaaa gctgccgatc acgttgcgca
     4441 tccggttgac gtagccgttg ccctcttcca gcgagatcgt cgacggcatc gtcgcccgga
     4501 tccacaggtt gccctcttcg agcttgggca gaaattcgag cccgagcgag cggatggcca
     4561 gacccgcgac cagcagcacc gcgattgcgc cagctatggt cagcacgcga ttgtcgaccg
     4621 cgagacgcag cgccggcgca tacacgcgat gcaaggcccg cacgatccag gtttccgtct
     4681 cggtgacatg ctcgggcaac agcatcgcgc tgatcgccgg cgtgacggta aaggtggcga
     4741 gcagcccgcc cgcgagcgcg taggcgtagg tcttcgccat cggcgcaaag atgtgccctt
     4801 cgacaccgct gagcgtgaac agcgggagga agcctgcgat gatgattccg gcggcaaaga
     4861 agatcgaacg gttgacgtcg gatgcagcaa ggaagatcgc ggagagcttg cccgaaagtc
     4921 cctcggcggc gctgaccgcg ccagtcactg cggccgcaac ccccagccgc cgatagatgc
     4981 tttccaccat gatgacggtg ccatcgacca ccagaccgaa atcgattgcg ccgaccgaaa
     5041 gcaggtttgc cgactcgccc cgcagcacga ggatgccgac cgcaaagaac agcgcgaacg
     5101 gtatggtcgc ggcgacgatc agcgcggtgc gcaagttgcc gagaaacacc cattgcaggg
     5161 cgaagatcag caagatgccg aacgccatgt tgtgcaggac cgttcgcgtg gtgatgtcga
     5221 tcagctcctt gcggtcatag atgcgctcga tgcgcacgcc cggcggcaga atgttggaat
     5281 tgttgatgcg ctcgacttcg cgctcgaccc gcttgatcgt cggcatgctc tgctcgccgc
     5341 ggcgcatcag cacgatgccc tggacgatat cgtcgtcggc gtccttgccg gcgatgccga
     5401 gacgcggctt gttaccgacc tgcacggttg ccacgtcccg caccaggacc ggatttcccc
     5461 cgctctgggt cagcatcgtg ttgctgagct cgtccgcgga gcggatgagc cccacgccgc
     5521 ggaccaccgc cgcctgcggg ccgatattga cggtattgcc gccgacattg atgttgctgt
     5581 tgttgagggc ctgcagcagc tgcggcaacg tgatgccgta agcaatcagc ttgttgaaat
     5641 cgacttcgag ttcgaaggtc ttggtcttgc cgccccatcc gatgacgtcg atgacgcccg
     5701 gcaccgcgcg aaatcgccgc tgcagcatcc aatcttgcag cgtcttgaga tcgagaacgc
     5761 tgtagccggg aggaccgacc agccggtagc ggtagatttc tccaatcggg ctgaccggcg
     5821 aaatctgcgg ctgggcgttg ttcggcagcg gggggatttg cgccagccgg ttgagaacct
     5881 gctgcagggc ctggtcgtag gtgaactcga acgagaactg cagcttgacg tcggaaagcc
     5941 cataaagcga gatggtgcgg atcgaggtga gattacgcag ccccgcgatc tgcgcctcga
     6001 tcgggatcgt gatgtagcgc tcgatttcct cggcagataa gccgggactt tgggttatca
     6061 cgtccaccat cggcggggtg ggatcgggat aggcctcaat gttgagctcg cggaaggcga
     6121 ggacgccgcc gaagaggacc agcatgaaca acaggacgac caggccgcga tgcttgagcg
     6181 aaaaggcgac gatcccgttc atggcgccgc tttcgggacc gcttcagcgc tcgatgccac
     6241 gcggtcgatg aagagactcc ccttggtcac cacacggtcg cccggcccaa ggcccttgag
     6301 cgcctcgacc aagttgccgt tggtaaggcc gactttgatg cgccgcagct cgatcgcttt
     6361 ttcatcgtcc ttctcgcgca ccacccagac gcgggcggtg tccccctcgt ggatgatggc
     6421 atcgcgcggc accgcgaccg cgttgtcgcc ttcgccggtg aggatcttca cgctcgcaaa
     6481 catttccggc ttgaacagtc cttcggcgtt gttaaccgtc gcgcgcacca gcagccgccg
     6541 ggtggtcggg tcgagcgctg cggccacata ggagatgctg gctgggaatg cacggtccgg
     6601 ataggcgagc acggtgaaat agattggctg gccgacgtgc accagcggcg cttcggtctc
     6661 gcggatatag gcgacgatcc agactgtcga caaatcgccg atgatgaata ccggatcgct
     6721 ctgtccgctg ccgacgtatt ggcccggtcc gaccttgcgt tgcacgatcg ttcccgcgat
     6781 cggggcggtg atcagcgtag agggatcgat cgtgcccttt tcctggaaat cggtgatttc
     6841 ctggtcggtc ttgccgagaa tgcgcagtcg attgcgcgct gcctccagcg ccacgtcggc
     6901 cgagcgcacg tcgttctcgg cggcatctag cgcggcacga gcgttttgca cctccttgag
     6961 cggcaccgcc ttgccctcgt agaggaggcg ctgacgcttg tcgatgatct cggccaggtt
     7021 ttgcgccgag cgcgccttgt tcagcgcggt ggcggccgaa atgaaatcgt tctgcgcctg
     7081 caccatgtcg gcggcttgca ccgtgaacag cggctgcccg accgttacgg tatcgccggg
     7141 cttgacgaac agcttgagca ccctgccggc atagggagaa aagatcgggg tcgaccggtc
     7201 ctcgtcgacc gcgatcttgc cctcggtgac gtgttcggcg cggaacaccc gctgctgcac
     7261 cggctcgacc gtcagcgtcg cccactgcgc cgcggtcgga tagaacaccc cggcaccttt
     7321 cttggacggg ctcagcgccg ccctgtccgg gtcccgcacg tcgctgttgg tacgcgattt
     7381 ggcgacccaa acgccggcgc cggcggcgaa taccaagacg gcgacgacga gcacctgcac
     7441 gcgagcaggc agcgctcgcg cccttgactg cgggcgattg agatcgctgg acacctgttt
     7501 ccaacctcgg ggcgacgccg ttatttctta tatccgagcg ccgttcttcc taccacaaac
     7561 atgcgatgct tgggtgaacg gcgctggcca cgcaatagat tttgccggcg cgatattgga
     7621 aaaactcgcc acggcaaatg ccaagaaagc ctttcggccg catggtaaaa gcgctgcctg
     7681 ggccgtcacc cttgcattac cgatccggag tgatccccag caccgcgcca cccccttccg
     7741 gacgacgggc accatatgcg ggtacggcta c
//
LOCUS       DATCWM010000037         2393 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_59688, whole genome shotgun sequence.
ACCESSION   DATCWM010000037 DATCWM010000000
VERSION     DATCWM010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2393)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2393)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2393
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59688"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..456)
                     /locus_tag="VIQ50_00695"
     CDS             complement(<1..456)
                     /locus_tag="VIQ50_00695"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03619 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HEY9358920.1"
                     /translation="MHVGLTMFPTDYSIPPHDLAVAAEARGYESLWLPEHSHIPTSRK
                     SPWPGGAELPKYYYDSYDPFVSLAAAAAVTKTIKLATGICLVVERDPIHTAKEVSTVD
                     QLSSGRFIFGVGGGWNEEEMANHGTAFATRFKLMRERIQAMKQIWTQSTA"
     gene            complement(701..1159)
                     /locus_tag="VIQ50_00700"
     CDS             complement(701..1159)
                     /locus_tag="VIQ50_00700"
                     /inference="COORDINATES: protein motif:HMM:TIGR03668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03668 family PPOX class F420-dependent
                     oxidoreductase"
                     /protein_id="HEY9358921.1"
                     /translation="MLSDHERRFLLTRRVGHLATADSRAIPHVVPVCFTISQGTLYIT
                     IDEKPKRVAGPALKRVRNIERNPMVAIVVDRYDEDWTRLGWVMLRGRAEILRAGTEHD
                     RAQELLRSRYRQLAAMQIAERPVIAVRLERVTSWGNLSVGADEADHDGQA"
     gene            complement(1240..2193)
                     /locus_tag="VIQ50_00705"
     CDS             complement(1240..2193)
                     /locus_tag="VIQ50_00705"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03619 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HEY9358922.1"
                     /translation="MLIGFNAPTAGPLSAADNLAKIVVGAETMGFDYATFSDHIVIPT
                     AIAAEYPYSASGEFPSGTRGERHEQLTEIAWIAAKTTRLRLVTSVMVVPHRPAVLTAK
                     ILSTIDILSDGRLTLGIGAGWMREEFEAIDAPDFDARGTVTDEYVRSFVELWTKDAPK
                     FDGKHVQFANIGFDPKPVQKPHPPIWVGGESGPALRRAARIGDAWYPIGTNPQNPLDS
                     LTRFKAQAARLGKMTAEAGRDPKAVGLSLRVTVFGETAPPLAGDGEHRLLAGPPALVA
                     VDIRALRDMGVSCIDFGFGGSTADEVLTGMQKFRAEVLPLV"
BASE COUNT          435 a          787 c          738 g          433 t
ORIGIN      
        1 cgccgtcgac tgcgtccaga tttgcttcat cgcctggatc cgctcacgca tcagcttgaa
       61 gcgggttgca aacgcagtgc cgtgattggc catctcctcc tcgttccaac ccccgccaac
      121 gccgaaaatg aaccggcccg aggaaagctg gtcgacggtc gatacctcct tggcggtgtg
      181 gattggatca cgctcgacga caagacagat ccccgtcgca agcttgatgg ttttcgtcac
      241 cgcggcggca gcggctagcg agacgaacgg atcgtagcta tcgtaatagt acttcggcag
      301 ctcagcgccg ccgggccacg gcgatttgcg actggtggga atgtgactgt gctccggcaa
      361 ccacaatgac tcgtaacctc gcgcctccgc cgccacggca aggtcgtgcg gtggaatcga
      421 gtaatccgtc ggaaacatcg taagcccgac atgcatgttc agtgctcctc ggttgcggcc
      481 aggctccatc acacgcgacc gcacgtgatg gtcgcacaca tcaggggcgc gaaccaatgt
      541 ccttctcaac tttatcagag aaatgagcgg acgtaccgtt gtttgtcgca acgctggccc
      601 tcatcgcagc gacggcttgt cgagcttcgc gcatcgggcg ggattacagg atctcggggt
      661 gcgacgaccg ggacttacgc cattacggtc gcaacagcct ctaggcttga ccatcatggt
      721 cggcctcgtc cgcgcccacg gacaggttgc cccagctcgt cacccgctcc aggcggaccg
      781 cgataacggg ccgttcggcg atctgcatcg ccgccaactg gcggtaccga gagcgtagca
      841 gctcctgcgc gcgatcgtgc tccgtcccgg cgcgcaggat ctcagcccgt ccacgcaaca
      901 tcacccagcc aagccgggtc cagtcttcgt cgtaccgatc aaccacgata gcgaccatcg
      961 ggttgcgctc gatgttgcgg acgcgcttga gtgctggtcc agccacgcgc ttcggcttct
     1021 cgtcgatggt gatgtaaagg gtgccttgcg aaatcgtaaa gcacaccggc acgacgtgcg
     1081 gaatggcccg gctatcggcc gtggcaagat gcccgacccg tcgcgtcaac aggaacctgc
     1141 gttcgtggtc tgacagcacg tgacggtccg ccgcgcgatg actgtcaatc gcgccgatac
     1201 tgcacggctt ggctcggctt cgccacccag gaatcgctcc tacacgagcg gcaagacctc
     1261 ggccctgaat ttctgcatac ccgttaggac ttcgtcggct gtcgaaccgc cgaaaccgaa
     1321 atcgatgcag ctgacaccca tgtcgcgcag cgccctgatg tcaacggcga cgagtgccgg
     1381 cggaccggcc aacaggcgat gttcgccatc accagccagc ggtggcgcgg tctcgccgaa
     1441 caccgtgacg cgcaagctca ggccgaccgc cttgggatcg cgccccgctt ccgcggtcat
     1501 cttgcccagg cgcgccgcct gggccttgaa acgcgtcagg ctgtcgagcg gattctgcgg
     1561 gttggtgccg atcggatacc aggcatcacc gatgcgcgca gcccgccgca gcgccggacc
     1621 gctctcgcct ccgacccaaa tcggcggatg cggcttctgc acgggcttcg ggtcgaaacc
     1681 gatattggcg aactgcacat gcttgccgtc gaatttcggc gcgtccttcg tccagagttc
     1741 gacgaaggag cgcacgtatt cgtcggttac agttccacgc gcatcgaaat ccggcgcgtc
     1801 gatggcctcg aactcctccc gcatccagcc cgcgccgata ccgagcgtca gccggccatc
     1861 cgagaggatg tcgatggtcg agagaatctt ggcggtcagc acggccggcc ggtgcggcac
     1921 caccatgact gatgtcacga gacgcaggcg cgtcgttttc gcggcgatcc aggcgatctc
     1981 cgtcagctgt tcgtgccgct cgccgcgggt accgctaggg aattccccgg aggcgctgta
     2041 gggatattcg gccgcgatcg cggtcggaat cacgatatgg tcgctgaacg tcgcatagtc
     2101 gaagcccatc gtctcggcgc caaccacgat tttcgcaagg ttatccgcgg ccgacagggg
     2161 gccggcggtc ggtgcgttga agccgatcag catttgttgc gtccttcctt gcattgcatt
     2221 gcaggcgtcg atgcgacacc atgcggccgc cagcgggtgg cggcaagcgc ctcccgcaac
     2281 gaaatgcgac cccctacggg cggagatgat ggattgtgac ggcggccggt agacaggcga
     2341 cgcggcagcg gttcgaagcg ccgctggccg aactgatatc agaagccgcg gcc
//
LOCUS       DATCWM010000038         2493 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_491589, whole genome shotgun sequence.
ACCESSION   DATCWM010000038 DATCWM010000000
VERSION     DATCWM010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2493)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2493)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2493
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_491589"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1774)
                     /gene="ppdK"
                     /locus_tag="VIQ50_00710"
     CDS             complement(<1..1774)
                     /gene="ppdK"
                     /locus_tag="VIQ50_00710"
                     /EC_number="2.7.9.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007607178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050242 - pyruvate, phosphate dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0015976 - carbon utilization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, phosphate dikinase"
                     /protein_id="HEY9358923.1"
                     /translation="MVKSTSRRIKSISKRPAGKAAPRKPAAPAKAPPKKPSAKAPAKS
                     KWVFGFGNGKAEGRADMRNLLGGKGAGLAEMANLGLPVPPGFTITTAVCTHYYENGNA
                     YPKNLQEQVRAALAQVGRITGKSFGDGDNPLLVSVRSGARASMPGMMDTVLNLGLNDA
                     TVEALAKNSGDKRFAYDSYRRFITMYSDVVLGLGHHHFEEILDDHKDRNGYTLDTDLT
                     TDDWVDLVGRYKERLEEEHGAPFPQDPHEQLWGAISAVFGSWMNQRAIIYRRLHGIPE
                     SWGTAVNVQAMVFGNMGETSATGVAFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPQ
                     EITELARKEASSDKPSMEKAMPAAFNELTRIYGVLERHYRDMQDLEFTVEQGKLWMLQ
                     TRLGKRAANAAIRIAVELANEGLITRKEAVTRIDPGALDQLLHPTIDPNAERKIIATG
                     LPASPGAASGEIVFSSDEAEALKAKDRKVILVRVETSPEDIHGMHAAEGILTTRGGMT
                     SHAAVVARGMGKPCVSGAGALRVDYAAGTMSIAGRTFKAGDIITIDGSTGQVLAGRVP
                     MTEPALSREFATLMGWADAVRTLGV"
     gene            complement(1870..2013)
                     /locus_tag="VIQ50_00715"
     CDS             complement(1870..2013)
                     /locus_tag="VIQ50_00715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012454889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3096 domain-containing protein"
                     /protein_id="HEY9358924.1"
                     /translation="MAHITPLVALLAGILILIVPRLLSFIVAIYLIIVGLIGLNAIHH
                     FIR"
     gene            2275..>2493
                     /locus_tag="VIQ50_00720"
     CDS             2275..>2493
                     /locus_tag="VIQ50_00720"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEY9358925.1"
                     /translation="MGYETINVTPVTPRIGAEVDGLTLAKPLSNRQVEELHQALAEHQ
                     VLFFRDQPLDVEGHKAFGRYFGDLHIHPN"
BASE COUNT          412 a          793 c          832 g          456 t
ORIGIN      
        1 gcacgccgag cgtgcgcacc gcgtcagccc agcccatgag ggttgcgaac tcgcgggaga
       61 gcgccggctc cgtcatcggc acgcgccccg ccagcacctg cccggtcgag ccgtcgatgg
      121 tgatgatatc gcccgccttg aacgtgcgcc cggcaatgct catggtgccg gcggcgtagt
      181 ctacgcgcag cgcgccggcg ccggaaacgc agggcttgcc catgccgcgc gccaccacgg
      241 cggcgtgcga ggtcatgccg ccgcgggtgg tgagaatgcc ctcggccgcg tgcatgccgt
      301 ggatgtcctc gggcgaggtc tcgacccgga cgaggatgac cttcctgtcc ttggccttga
      361 gcgcctcggc ctcgtcggag gagaacacga tctcgccgga cgcggcgcct ggcgaagccg
      421 gaagcccagt ggcgatgatc ttgcgctcgg cattgggatc gatggtggga tgcaggagct
      481 ggtcgagcgc gcccggatcg atgcgggtga ccgcctcctt gcgggtgatc agaccttcgt
      541 tggcaagctc gaccgcgatc ctgatcgcgg cattcgccgc gcgcttgccc aagcgcgtct
      601 gcagcatcca cagcttgccc tgctcgacgg tgaattcgag gtcctgcatg tcgcggtagt
      661 ggcgctcgag cacgccgtag atgcgggtca gctcgttgaa cgccgccggc atcgcctttt
      721 ccatcgacgg cttgtcggag ctggcctcct tgcgcgcgag ctcggtgatc tcctgcgggg
      781 tgcggatgcc ggcgaccacg tcttcgccct gggcattgat caggaactcg ccgtagagct
      841 tcttctcgcc ggtcgatgga ttgcgcgtga aggcgacgcc cgtcgccgag gtctcgccca
      901 tgttgccgaa caccatggcc tgcacgttga ccgcggtgcc ccagctttcc ggaataccgt
      961 gcaggcgccg atagatgatg gcgcgctggt tcatccagga cccgaacacg gcgctgatcg
     1021 cgccccacag ctgctcatgc gggtcctgcg ggaacggcgc tccgtgctcc tcctcgagcc
     1081 gctccttgta gcggccgacc agatcgaccc agtcatcggt cgtgagatcg gtgtcgagcg
     1141 tgtagccatt ccggtccttg tggtcgtcga ggatctcctc gaagtgatgg tgaccgaggc
     1201 cgagcacgac gtcggaatac atcgtgatga agcggcgata ggaatcgtac gcgaaacgct
     1261 tgtcgccgga gttcttcgcc agcgcctcga ccgtcgcgtc gttgaggccg agattgagca
     1321 cggtgtccat catccccggc atggacgcgc gcgcccccga gcgcacagac accagcagcg
     1381 gattgtcgcc gtcgccgaag ctcttgccgg tgatgcggcc gacctgggcg agcgcggcgc
     1441 ggacctgttc ctgcaggttc ttggggtagg cgttgccgtt ctcgtaatag tgcgtgcaga
     1501 ccgcggtcgt gatggtgaag ccgggcggca ccggcaggcc gagattggcc atctcggcaa
     1561 ggcccgcgcc cttgcctccg aggaggttgc gcatgtcggc gcggccttcg gccttgccgt
     1621 tgccgaagcc gaagacccat ttcgatttgg cgggagcttt ggccgaaggc tttttgggcg
     1681 gagccttcgc cggcgcggcc ggcttgcggg gcgcggcttt gccggcgggt cgtttgctga
     1741 tcgatttgat acggcgcgac gtcgatttga ccatggaatt cacggattcg gttgcgcccg
     1801 gccctaatga tcacggccgc cgatgccgac gcaagcccgg aaatttgcgc gcggcgaagg
     1861 gctttcccgt caccggatga agtggtgaat ggcgttgagg ccgatcagtc ccacgatgat
     1921 cagatagatc gccacgatga agctcagcag ccgcggcacg atcaggatca agatgcccgc
     1981 gaggagggcg acgagcggcg tgatgtgggc aatgtggtga gggtcaccag atcaatacgg
     2041 atgaagtttt cgatacacac aggtgtcacg caccaatttt ggttgcaatc acttccctct
     2101 cacccgcatc gcagccgccc gcggcagatc gaccaaagaa catgggtggc agcggccgcg
     2161 tcatcgagcg aaagctgatt gccacagtcc gccgagaaag cgctgtggtg gctgcggcga
     2221 tggcgacagt ccccgaaaac tcatatattt tccccgcact caagaggtca cgccatgggc
     2281 tacgaaacca tcaacgtcac gccggtcacg ccgcgcattg gcgccgaggt cgacggcttg
     2341 acactcgcca agccgctcag caaccgccag gtcgaggagt tgcaccaggc gctggcggag
     2401 catcaggtcc tgttctttcg cgatcagccg ctcgacgtgg aaggccacaa ggcgttcggc
     2461 cgctattttg gcgacttgca cattcacccg aac
//
LOCUS       DATCWM010000039         3384 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_178467, whole genome shotgun sequence.
ACCESSION   DATCWM010000039 DATCWM010000000
VERSION     DATCWM010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3384)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3384)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3384
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178467"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(143..823)
                     /locus_tag="VIQ50_00725"
     CDS             complement(143..823)
                     /locus_tag="VIQ50_00725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011090567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2270 domain-containing protein"
                     /protein_id="HEY9358926.1"
                     /translation="MSLMVSSESNPRHTFDPAEMGVIAHLYRGEVYRSTIWRTRLDNT
                     TNWSIVTMGIALSTTFSSPEASPLPLVLVGLLLAVFLGMEARRYRYFNVWRARARWLE
                     MNFYAPIFTGEARDDTWQVILARDYTAPGHHISFVRAAGRRLRRNYIWIFAIQAIAYY
                     GKIAIHPTPAATLAEYSDRAAVGPIPGWIVLMTGFAYYFGWLAFALGTMWLDQRQHDA
                     KGDKVAMG"
     gene            1232..2158
                     /locus_tag="VIQ50_00730"
     CDS             1232..2158
                     /locus_tag="VIQ50_00730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEY9358927.1"
                     /translation="MSETNTVSPLRQRMIKDMTARKLNPHTQRGHISSCKRFAAWLKR
                     SPDTATPDEVRRFQLYLIESGASICNRNRIMTGVRFLFRVTLRRHDLAAEVWHIKEPQ
                     KLPPVLSPEEVKRVLTMAPSLKARAMLTLAYGCGLRASEVVRLRAGDIDSEQMIIRIV
                     QSKGRKDRHVMLPAEVLDLLRQWWKARPTEEDAGVAPEQRWLFPGRSDHQPLTTRQFS
                     RLFKEAAKAAGLRKTVSLHSLRHSFATHLLERGTDIRVIQALLGHDKLETTARYSRVA
                     TGMIAKIESPLEGLSAPRRRRARQNTEEPPAP"
     gene            2170..>3384
                     /locus_tag="VIQ50_00735"
     CDS             2170..>3384
                     /locus_tag="VIQ50_00735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015934105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
                     /protein_id="HEY9358928.1"
                     /translation="MAQPALEVADILRDHGPAWREANRGHVSLDQLKVMGAIERGRTA
                     ALGGHVARCENAACGHTEIAYNSCRNRHCPKCQGAASRRWLADREAELLPVPYFHVVY
                     TLPSALRDIAYQNKRMVYDLLMKAAAETTLSIATDPRRLGARIGITAVLHTWGSALTH
                     HPHVHMIVPGGGLSLDNARWVASRSNFLVHVNVLARLFRGKMLAMLMHAHNAGQLTFF
                     NTHAGLADKRTFKRFIAPLRRIKWVVYCKAPFAGPEQVLRYLSRYTHRVAISNRRLVA
                     ADDTDIAFRWKDYRINGPGRWKTMRLHPHEFIRRFLLHVLPKGFHRIRHYGLFASANR
                     AENIATARALLNGAPPAVDPQKQPDLTPDAPRVLPCSCPLCGARMIVIEVFARGCEPR
                     YRPAPAPTPIRID"
BASE COUNT          654 a         1097 c         1048 g          585 t
ORIGIN      
        1 cgggcaacct cgcatcccat gagctgcatt cttcgtcctc gattatcgca gctttcgccc
       61 cgagcgccgc ccactgacaa gcgtgttcac ggtcagcacc cccgtcaagc cggcgttgcg
      121 ctagcgccgc ggctcccgct cactaaccca tcgccacctt gtcgcccttg gcgtcgtgct
      181 ggcgttggtc gagccacatc gtgcctagcg cgaacgccag ccagccgaaa tagtaggcaa
      241 agcctgtcat cagaacgatc cagccgggaa tcggtccgac ggcggcgcga tcggaatatt
      301 cggccagggt cgccgcaggc gtcggatgga tggctatctt gccgtaatag gcgattgcct
      361 ggatggcgaa aatccagatg tagttgcgac gcaaacgccg cccagccgcg cggacaaacg
      421 aaatgtggtg gccgggcgcc gtgtagtcgc gtgcgagaat cacctgccag gtatcgtcgc
      481 gcgcttcacc ggtgaatatt ggcgcataga aattcatctc cagccagcga gcccgggcgc
      541 gccagacatt gaaatatcga tagcgccgcg cctccatgcc gagaaacacc gcaaggagca
      601 gccctaccaa cacaaggggc aggggtgacg cctccgggct cgaaaaggtc gtcgacagcg
      661 cgatgcccat cgtgacgatc gaccaattgg tcgtgttgtc gagccgcgtt cgccagatcg
      721 tcgagcgata gacttcgccc cggtagagat gcgcgatgac gcccatttcg gcgggatcga
      781 acgtgtggcg ggggtttgat tcgctggaaa ccataagaga catgacgggc ctccggttgt
      841 ccgaacaaca tttccgcaaa tcaccggcgc tgaccaggga cagtccacat catcgacgcc
      901 gatgaaacca tccggaattg tgatgccgga actatccttt ctctgagcct gaattaccag
      961 catcgagtcc gagaatagtg cggtgcgccg caatatctcg gaagaactca gtttgagcaa
     1021 atgtcttccg ggttacccct gaaagcagac atcgctcgat gcagtcggga tgtctcaaac
     1081 gggccagagc acaaagtcgc tgcgctccag cccgcttcgc gggagcaaga gtcgagaggc
     1141 cagtagccag ttgagaggat aggagtagcg ccggagagcc ccgtcctgag aatcgaggtg
     1201 ttgacaatcc tcactcagaa tggagctccc catgagcgag actaacactg tcagtccgct
     1261 gcgtcagcgt atgatcaaag atatgactgc gcgcaagctc aatccgcaca cgcagcgtgg
     1321 ccacatttcc agttgcaagc ggttcgccgc ttggctcaaa cgctcgcccg atacggcaac
     1381 acccgacgag gtgcgccgat ttcagctgta tctcattgag agcggtgcga gcatctgtaa
     1441 ccgcaatcgg atcatgaccg gggtgcggtt cctgttccgc gtcacgctgc gtcgccacga
     1501 tctggcggcc gaggtctggc acatcaagga gccgcagaag ctgccgccgg tgctgagccc
     1561 tgaggaggtc aagcgtgtcc tgactatggc gccgagcctg aaggcgcgag cgatgctgac
     1621 actcgcctat ggttgcgggc tgcgggccag cgaagtggtg cggctgcgcg cgggcgacat
     1681 cgacagtgag cagatgatca tccgcatcgt gcagtcgaag ggccgcaagg accgacacgt
     1741 gatgctgccg gcggaggtcc ttgacctgtt gcggcaatgg tggaaggcgc gcccgaccga
     1801 ggaagacgcc ggcgtcgcgc cagaacaacg ctggctgttt cccggtcgca gtgatcatca
     1861 gcctctgacc acgcgtcagt tcagccggct gttcaaggaa gccgcgaaag ccgcggggct
     1921 gcgcaagacg gtctctctgc attcgcttcg ccacagcttt gcgacccatc tgctcgagcg
     1981 cggcacggac attcgggtga ttcaggcttt gctcggacac gacaagcttg agaccacggc
     2041 ccgctacagt cgcgtggcga ccggaatgat tgccaagatc gaaagccccc tggaaggcct
     2101 gagcgcgcca cgccgcaggc gtgcgagaca aaacaccgaa gagccgccgg cgccgtagcg
     2161 ccgccggcca tggctcaacc agctctggag gtcgcggaca tcctccgcga tcacggccct
     2221 gcttggcgtg aggccaatcg cgggcacgtc agcctcgacc aattgaaggt gatgggtgcg
     2281 atcgagcgcg gtcgcacggc ggcgctcggt gggcatgtcg cgcgctgcga gaacgcggcg
     2341 tgcggccata cggagatcgc gtacaactcc tgccgcaacc ggcattgccc gaagtgccag
     2401 ggcgcggcgt cacgccgatg gctggccgac cgcgaagcgg agctgttgcc ggtgccgtac
     2461 tttcacgtcg tgtacacgct gccaagcgcg ctgcgtgaca tcgcgtacca gaacaagcgc
     2521 atggtctacg acctgctgat gaaggcggcg gccgagacga cgctcagcat cgccaccgat
     2581 cccaggcgcc tcggcgcgcg catcggtatc acggccgtgc tgcacacgtg gggctcggcg
     2641 ctcacccatc atccgcacgt gcatatgatc gtgccgggtg gagggctctc gctcgataat
     2701 gcgcgatggg tcgcctcgcg ctccaacttc ctcgtgcatg tcaacgtgct ggcgcgcttg
     2761 ttccggggca agatgctggc gatgctcatg catgcgcaca acgccggcca gttgacgttc
     2821 ttcaacacgc atgccgggct tgccgacaag aggacgttca agcgcttcat cgccccgctg
     2881 cggcgcatca agtgggtggt ctattgcaag gcgccgtttg cagggcccga gcaggtgctg
     2941 cgctatctct cccgttacac gcatcgtgtc gccatctcga accgccgcct cgttgcagcc
     3001 gacgacaccg acatcgcctt ccgctggaag gactatcgca tcaacggccc cggccgctgg
     3061 aagacgatgc ggcttcaccc gcacgagttc atcaggcgct tcctgctgca cgtgctgccc
     3121 aagggcttcc accgcatccg ccactacggg ctctttgcct ccgccaaccg cgccgagaac
     3181 atcgcgacgg cccgtgcact cctcaatggc gccccgcctg ccgtcgaccc gcaaaagcaa
     3241 ccggacctca cgccggatgc gccacgtgtg ctgccctgct cgtgcccgct ctgtggcgct
     3301 cgcatgatcg tcatcgaggt cttcgcgcgc ggatgcgagc cgcgatatcg cccagcgccg
     3361 gcaccgacgc cgatcaggat cgac
//
LOCUS       DATCWM010000040         2625 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_243262, whole genome shotgun sequence.
ACCESSION   DATCWM010000040 DATCWM010000000
VERSION     DATCWM010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2625
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_243262"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..183)
                     /locus_tag="VIQ50_00740"
     CDS             complement(<1..183)
                     /locus_tag="VIQ50_00740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012752610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein
                     PqqE"
                     /protein_id="HEY9358929.1"
                     /translation="MVHKPLGLLAELTHRCPLGCPYCSNPLALDAREDELDTATWVRV
                     FGEAAGLGVLQVHLSGG"
     gene            complement(391..588)
                     /gene="pqqD"
                     /locus_tag="VIQ50_00745"
     CDS             complement(391..588)
                     /gene="pqqD"
                     /locus_tag="VIQ50_00745"
                     /inference="COORDINATES: protein motif:HMM:TIGR03859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis peptide
                     chaperone PqqD"
                     /protein_id="HEY9358930.1"
                     /translation="MLLAPERVFKADAIAAEIIKRCTGEVTFSELIDDLAKAYTAPRE
                     KILADVGALLRGLVDKKLLEV"
     gene            complement(678..1421)
                     /gene="pqqC"
                     /locus_tag="VIQ50_00750"
     CDS             complement(678..1421)
                     /gene="pqqC"
                     /locus_tag="VIQ50_00750"
                     /EC_number="1.3.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline-quinone synthase PqqC"
                     /protein_id="HEY9358931.1"
                     /translation="MKPLTPQELEAKLRAIGAQRYHRLHPFHALLHGGKCTKGQVQAW
                     ALNRYYYQAMIPVKDASLIARCEDPALRREWRRRLVDHDGESEGDGGITRWLKLTDGV
                     GLDRDYVVSLTGLLPATRFAVEAYVHFVRDKTLLEAVASSLTELFSPQIISERLEGML
                     KGYDFVSADTLAYFAKRPPLARRDSDFALDYVKRHAKTPDAQQVVLKALEFKCDVLWA
                     MLDALYHAYVAPKHIPPGAFVPEDGRRSG"
     gene            complement(1418..2323)
                     /gene="pqqB"
                     /locus_tag="VIQ50_00755"
     CDS             complement(1418..2323)
                     /gene="pqqB"
                     /locus_tag="VIQ50_00755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012453680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein
                     PqqB"
                     /protein_id="HEY9358932.1"
                     /translation="MGRLTVLVLGSAAGGGFPQWNCRCATCRLAWAGDARVRPRTQAS
                     LAVSADGENWLLINASPDLPQQVRQSKVLHPRSGTRGSPIKAVVLTGAEIDQVAGLLS
                     LREREPLMVCATPATLAALADNAMFGVLAADVVRRTAAIPGVPLMLPGEVEARVFMVP
                     GKLPLYLEGENPETASETAANVGVEISARNARLVYIPGAAAVTAAMMERIKRADVVFF
                     DGTLFRDDEMIASGTGAKTGRRMGHMPIDGQDGSLAVLEGVAGRRVYVHVNNTNPILI
                     EGSPERVEVERKGWEVAEDGMEIVL"
BASE COUNT          462 a          869 c          854 g          440 t
ORIGIN      
        1 gccgcccgac aaatgcacct gcaggacacc aagccccgcc gcctccccga agacgcgcac
       61 ccaggtcgcg gtgtcgagct catcctctct cgcatcgagc gcgagcgggt tggagcaata
      121 ggggcagccg agaggacagc ggtgagtcag ctcggcgagc aggccaagcg gcttgtgcac
      181 cattgcggaa ctcgataacg ccacgtggcg gttgatccaa tgctctggcc aggcgtgcca
      241 ttgtacgtca ggtcttgcga cctgcggcac ttaatcgccc ggagcccggg gcagccccga
      301 gttccatttg ccatccacgc ctgcgggacc tgcctgcgca gctaaggacg tgggactagc
      361 ctggacaagc gcggttatga cgcctcttta tcacacttcc aagagttttt tgtcgaccaa
      421 accgcgcaac aacgcgccga catccgcgag gattttctcg cgcggcgccg tataggcttt
      481 ggcgaggtcg tcgatgagtt cgctgaaagt gacctctccg gtgcagcgct tgatgatctc
      541 ggcggcgatc gcgtcggcct tgaagacccg ctcgggcgca agcagcaccc agccgccctg
      601 cgcctcgttg tggacgagcc gaacgccgcg cggcagccgt gggcgcgcgt cggaggggat
      661 gacggtgctg ggatcgctca gccgcttctc ctcccgtcct ccggcacgaa ggcgccgggc
      721 ggaatatgct tcggcgccac gtaggcatga tagagcgcat cgagcatggc ccatagcacg
      781 tcgcatttga attcaagcgc tttgagcacg acctgctggg cgtccggcgt cttggcgtgg
      841 cgcttgacgt aatcgagcgc gaaatcggaa tcccgccgag cgagcggcgg acgcttggcg
      901 aaataagcaa gcgtgtcggc gctgacgaag tcgtagccct tgagcatgcc ctcgagccgc
      961 tcgctgatga tttgcggcga gaacaattcg gtgagcgagg atgcgaccgc ctcgagcagg
     1021 gtcttgtcgc ggacgaagtg cacataggcc tcgaccgcaa agcgcgtcgc cggcagcaag
     1081 cccgtgagcg agacgacgta gtcgcgatcg agcccgaccc cgtcggtcaa cttgagccag
     1141 cgcgtgatgc cgccgtcgcc ttcgctctcg ccgtcgtggt cgacaaggcg gcggcgccat
     1201 tcccggcgca gcgcggggtc ctcgcagcgc gcgatcaggc tcgcgtcctt caccgggatc
     1261 atcgcctggt agtagtagcg gttgagcgcc caggcttgga cttggccctt ggtgcacttg
     1321 ccgccgtgca acagcgcgtg gaacgggtgc aggcgatgat agcgctgcgc gccgatggcg
     1381 cgcagtttcg cctcgagctc ctgcggcgtc agcggcttca cagcacgatc tccattccgt
     1441 cctcggcgac ctcccagccc ttgcgctcga cctcaacgcg ctccggcgaa ccttcgatca
     1501 ggatcggatt cgtattgttg acgtgcacgt agacgcgtcg cccggcaacg ccctcgagta
     1561 cggcaaggga accatcctgc ccgtcaatgg gcatatgccc catgcggcgg ccagtcttgg
     1621 caccggttcc gctcgcgatc atctcgtcgt cgcgaaagag cgtgccgtcg aaaaacacga
     1681 cgtcagcgcg tttgatccgc tccatcatgg cagcggtcac tgcggcggcg cccggaatat
     1741 agacgaggcg cgcgttccgg gccgaaatct cgacgccgac atttgccgcc gtctcgctcg
     1801 cggtctccgg attctcgcct tcgagataga gcggcagctt gcccggcacc atgaacacgc
     1861 gcgcctcgac ctcgccggga agcatgagcg ggacgccggg aatggctgcc gtgcgcctga
     1921 ccacgtcggc tgccagcact ccgaacatgg cgttatcggc gagtgcggcg agggtggccg
     1981 gggtggcgca taccatcaaa ggctcgcgct cccgcaagct gagcaagccc gcgacctgat
     2041 cgatctcggc gcccgtgagc accaccgctt tgattgggct tccgcgcgtt ccgctgcgcg
     2101 ggtgcagcac cttcgattgc cgaacctgct gtggcagatc tggggaggcg ttgatcagga
     2161 gccagttctc gccgtcggcg ctgacggcaa ggctcgcctg ggtgcgcggc cgcacgcgcg
     2221 cgtcgcccgc ccatgccaaa cggcatgtcg cgcagcgaca attccattga ggaaagcctc
     2281 ctcccgccgc cgagccgagc acgaggacgg tgagtcgccc cattcaggac cgacgcaaac
     2341 gcgccgggat cagaattcgg ccggcaggta cccgttgatc tcgaggccga tgcagatctc
     2401 aacgagggtc ggggtagtcc acgccattgg tcgtccccta gcgtttccag atagcaacaa
     2461 ggtagatcgg gaccggccgc cgcgcaagca cctccgcacg cacgcaggga gcataaacgc
     2521 ctccgaagcg cgcagcagag agaaaaccgg acccttgcgg gtccggtttg cagttcgtcg
     2581 gcgcgggggc cgacaatcac cttccagagg ggaacagctg acggc
//
LOCUS       DATCWM010000041         2645 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_237896, whole genome shotgun sequence.
ACCESSION   DATCWM010000041 DATCWM010000000
VERSION     DATCWM010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2645
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_237896"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            458..1666
                     /locus_tag="VIQ50_00760"
     CDS             458..1666
                     /locus_tag="VIQ50_00760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013949473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEY9358933.1"
                     /translation="MSKNSSRPVGRHFLHIPGPTPLPDRVLRAMDTPIIDHRGPEFAK
                     LAKSCLDGIKTIFKTTNPVIIYTATGTGAWEAALVNTLSPGDRVLMVETGQFATLWKT
                     MAEKLGLRPEFITTDWRIGADPAAIEDHLRRDRNKEIKAVCVLHNETSTGCLSPIADV
                     RKAIDAAGHPALFFVDTISSLASTDYRHDEWGVDVTVGGAQKGLMLPPGMSFNAVSEK
                     AFAAAKSSQLAKSFWAWDDMLAMNKIGFFPYTPATQMLHGLAEGIAMLHEEGLENVFA
                     RHHRLAEATRRAVRAWGLEIMCRDAKYYSPTVTAVLLPEGHDADAFRNLALDTFNISY
                     GTSFGRYAGKYFRIGHLGDVNEGMLMGALAITEMALALAGIPHRKGGAQAAVDYLIAA
                     HASPAQAAAE"
     gene            1811..>2645
                     /locus_tag="VIQ50_00765"
     CDS             1811..>2645
                     /locus_tag="VIQ50_00765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY9358934.1"
                     /translation="MDIQGLGYVGIRAKSLEDWTAFGTRFLEMQLIERSGKSLALRMD
                     DRKQRVIVSEDGGEGVAFFGWEVADAAALDALAARLEAAGVEVARGSRALAGERRVED
                     LVVLADPQGNRLEIFHGAEIASKPFKPGRSISGFRTGPLGMGHAVLHVKDINEAVPFY
                     RDVLGFRLSDFMVRPFKAYFFHANPRHHSIAFIETGRSATHHLMVELYSLDDVGQCYD
                     LALAEEGRIGVTLGRHINDEVTSFYSNSPSGFMVEYGWGGRVIDVAGWQPQEVSWGPS
                     MW"
BASE COUNT          480 a          831 c          864 g          470 t
ORIGIN      
        1 ccttcaccga gcgcggcgcg acgacgccga gcggcatgat ctggtagtgc gaggcgtcgg
       61 tggcgtagcg gccgcgggtg aaggcgtcga acgccacatc cccgaggaga tgcgccttga
      121 gccgccgctc gagccccggt acgaccgttt gggccattcc actcactcag tagtacgatg
      181 gatttgcagt tcctatcatg ttgcctcaag ctcgctcagg aacttcaaat ccaaagaccg
      241 cactaaagtc atacggttgc taatgtccct ttgattccca agttcgcatt tgagcgtgcc
      301 gcgaggacgt gcgaacttcg gaatcggcca cactagccgc agctcagctc cccgtcgcaa
      361 gaggcttgac tgactctcgc attcgtcctt gatggcggca agctgcggcc gagcgccgtt
      421 gccgtgcaaa aagccgcgcc tgcaaaggga tcaaatgatg tcgaagaact cgtcacgccc
      481 cgtgggccgt catttcctgc acattcccgg gccaacgccg ctgcccgacc gggtgctgcg
      541 ggcgatggac acgccgatca tcgaccaccg cgggccggaa tttgccaagc tcgccaaaag
      601 ctgcctcgac ggcatcaaga cgattttcaa gaccaccaac ccggtgatca tctataccgc
      661 gaccggcacc ggcgcgtggg aagcggccct cgtgaacacg ctctcgcccg gcgatcgcgt
      721 gctgatggtc gagaccgggc agttcgccac gctgtggaag accatggcgg agaaactcgg
      781 gctgcggccg gaattcatca cgaccgactg gcgcatcggc gccgacccgg cggcaatcga
      841 ggaccatctg cgccgggata ggaacaagga aatcaaggcg gtctgcgtgc tgcacaacga
      901 gacctcgacc ggatgcctgt cgccgatcgc ggatgttcgc aaggccatcg acgccgccgg
      961 ccatcccgcg ctgttctttg tcgataccat ctcctcgctc gcctccaccg actatcggca
     1021 cgacgaatgg ggcgtcgacg tcaccgtcgg cggcgcgcag aagggcttga tgctgccgcc
     1081 cggcatgtct ttcaacgcgg tgagcgagaa ggcgtttgcg gcggcgaaaa gctcgcagct
     1141 ggcgaagtcg ttctgggcct gggacgacat gctcgccatg aacaagatcg gtttctttcc
     1201 ttacaccccg gcgacgcaga tgctgcatgg gctcgccgaa ggcatcgcca tgctgcacga
     1261 ggagggactc gagaacgtgt tcgcgcgcca ccatcgcctg gccgaggcga cgcggcgggc
     1321 ggtgcgcgcc tgggggctcg agatcatgtg ccgcgacgca aagtattatt cgccgacggt
     1381 cacagcggtg ctgctgccgg agggccacga cgccgacgcc ttccgcaacc tcgcgctcga
     1441 caccttcaac atttcctacg gcacgagctt cggccgctat gccggcaagt atttccgcat
     1501 cggccatctc ggcgacgtga acgagggcat gctcatgggg gcgctggcga tcaccgaaat
     1561 ggcactcgcg ctcgccggca tcccgcaccg taaaggcggc gcgcaagccg cggtcgatta
     1621 tctgattgcg gcgcatgcga gcccggcgca agcggcggcg gagtgatggg gcgggagtgg
     1681 taggcgccgt cgccatcgcg gttccaggcc acgcgtgcaa acggcaggac gggatcgacg
     1741 cgggaatttg ccaagatcgt cagggaagcc catacttctt taattgagtg aattctgacg
     1801 gaggccgtcc atggacattc aaggtctcgg ctatgtcggt attcgcgcaa aatcgttgga
     1861 ggattggacc gctttcggca cccgtttttt ggagatgcag ctcatcgagc gcagcggcaa
     1921 gagcctggcg ttgcgcatgg atgatcgcaa gcagcgcgtg atcgtcagcg aggatggcgg
     1981 cgagggagtc gcgttcttcg gctgggaggt ggccgatgcc gccgcgctag atgctctggc
     2041 ggcgaggctg gaagcggccg gcgtcgaggt ggcgcgaggc tcgcgtgcgc ttgcgggcga
     2101 acgccgcgtc gaggatctcg tggtgctcgc cgatccgcag ggcaaccggc tcgaaatttt
     2161 ccacggcgcc gagatcgcaa gcaagccgtt caagcccggc cgctcgatct cgggcttccg
     2221 caccggcccg ctcggcatgg ggcatgccgt gctgcacgtc aaggacatca acgaggcagt
     2281 gccgttctat cgagacgtgc tcggcttccg cctgtcggac ttcatggtgc ggcccttcaa
     2341 ggcctatttc ttccatgcca atccgcgcca ccattcgatc gccttcatcg agaccggccg
     2401 cagcgcgacg caccatttga tggtggagct ctacagcctc gacgatgtcg ggcaatgcta
     2461 cgatctggcg ctggccgagg aaggccgcat cggcgtgacg ctcggccggc acatcaacga
     2521 cgaggtcact tcgttctatt cgaactcgcc gtcgggcttc atggtggagt acggctgggg
     2581 tgggcgcgtg atcgacgtcg cgggctggca accgcaagag gtcagctggg gccccagcat
     2641 gtggg
//
LOCUS       DATCWM010000042         4940 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_162302, whole genome shotgun sequence.
ACCESSION   DATCWM010000042 DATCWM010000000
VERSION     DATCWM010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4940)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4940)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4940
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162302"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..678)
                     /locus_tag="VIQ50_00770"
     CDS             complement(<1..678)
                     /locus_tag="VIQ50_00770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019904273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY9358935.1"
                     /translation="MSAASRAAATTGAPASATAPASSLAPVLAVEHLSMRFGGLVAIN
                     DLCFTARRGDITALIGPNGAGKTTVFNCITGFYKPSEGRIALQFGDPGVWEELGALTE
                     RGTRSVSRGDGVLFLLERMPDYLVTQRARVARTFQNIRLFQGMTVLENLLVAQHNALM
                     WASGYTVLGALGLPSYARAERAAIDKARYWLERTALSERADDLAGELPYGAQRRLEIA
                     RAMCTDPV"
     gene            complement(675..2087)
                     /gene="livM"
                     /locus_tag="VIQ50_00775"
     CDS             complement(675..2087)
                     /gene="livM"
                     /locus_tag="VIQ50_00775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008121874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter permease LivM"
                     /protein_id="HEY9358936.1"
                     /translation="MALEASPPASRVDIAGALRQAAITGVIAFALLLPLIGFNTVQNI
                     RNELVLETRWPLLAALVAIIAAGRFLYAILIAPWLARRALRQRREDTERAKPHTRLNR
                     WLVPFALGFAIVYPALALSIVGTQGAVKWIDNFGVQILIYVMLGWGLNIVVGLAGLLD
                     LGYVAFYAVGAYSYALLADTFGLSFWILLPLAGCLAAFWGILLGFPVLRLRGDYLAIV
                     TLAFGEIIRLILINWVPVTNGYAGISSIPRPTFFGIPFNASDEGFAARFGLEFSPVYR
                     TVFLYYLVLALALVTAAMTVRLRRLPIGRAWEALREDEIACRSLGINTTNTKLTAFAM
                     GAMFAGFAGSFFAARQGFISPESFTFMESAVIVAIVVLGGMGSLLGVAIAAVIMIGGT
                     EIMRELDFLKAVFGSGFDPTQYRMLLFGFGMVLIMVWRPRGLIATRAPSTLLNAHRSS
                     RLQEEKAQTTQPSLVRERPR"
     gene            complement(2089..3009)
                     /locus_tag="VIQ50_00780"
     CDS             complement(2089..3009)
                     /locus_tag="VIQ50_00780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013892483.1"
                     /note="LivHMGF is the membrane component of the LIV-I/LS
                     branched-chain amino acid transporter; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease LivH"
                     /protein_id="HEY9358937.1"
                     /translation="MEVFIQQLINGITLGSIYGLIAIGYTMVFGIIGMVNFAHGDVFM
                     VSAFIALIAFLLLTTWLGIGSFVIALFIVLVVAMFFTSLLNWAIERVAYRPLRGSFRL
                     APLISAIGMSIFLSNFVQVAQGPRVKSIPPFFNEVIVLTSASSGYEVAVSYKQIVVWV
                     VTAALLFVFWFLVSKTALGRAQRACEQDQKMAALLGIDVDRTISITFVIAAALAAVAG
                     TMYLMYYGVVSFADGFVPGVKAFTAAVLGGIGSLPGAVVGGLLIGLIETMWSAYFSID
                     YKDVAAFSILAITMIFLPQGILGRPDVEKV"
     gene            3273..4847
                     /locus_tag="VIQ50_00785"
     CDS             3273..4847
                     /locus_tag="VIQ50_00785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013891925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase N-terminal
                     domain-containing protein"
                     /protein_id="HEY9358938.1"
                     /translation="MKSEDVIAAKGRPFTGAEYLASLRDGRDVFIYGERVEDVTTHPA
                     FRNAARSIARLYDALHDPKTKDVLTWPTDTGSGGYTHKFFRAARSREELTEQRDAIAQ
                     WARMSYGWMGRSPDYKASLMNTLGANHRFYGRFSGNARAWYRRAQDHVLFMNHAIVNP
                     PVDRAKASDQVKDVFIAIQKETDAGIYISGAKVVATSSALTHYNFLGQNAAVPTHDTD
                     LAVMFIAPMNTPGVKLFCRTSYEMMASVMGTPFDYPLSSRFDENDAIFVFDNAFVPWE
                     DVLLHRDIEKLKTFFPQSGFLAGYQFQGCTRLAVKLDFLVGVIAKALRTTGADGFRGN
                     QAMLGEVIAWRNLFWALTDAMAASPTPWVDGAVLPNLQAGSSYRVFAGDAYGRVKEIV
                     EKIIASALIYLPSSARDFKNPEIDKYLAKYVRGSYGIDYKERIKVMKLLWDAIGTEFG
                     GRHELYEMNYAGNHEDIRIQAMWNARMSGTLDGMIALADQCLADYDENGWRDAAWVDP
                     DDVAYPAVAGVNRAAE"
BASE COUNT          971 a         1600 c         1614 g          755 t
ORIGIN      
        1 caccgggtcc gtgcacatgg cgcgggcgat ctcgagccgc cgctgcgccc catagggcaa
       61 ctcgccggcc agatcgtcgg cacgctcgct cagcgccgtc cgctcgagcc aatagcgcgc
      121 cttgtcgatc gccgcgcgct ccgcccgcgc gtaggagggc agtcccagcg cgcccagcac
      181 cgtatagccg gaggcccaca tcagggcatt gtgctgggcc accagaagat tttccaacac
      241 ggtcatgccc tggaacaacc ggatgttctg gaacgtgcga gcgacgcggg cccgctgcgt
      301 caccaggtag tcgggcatgc gctcgagcag aaacagcacg ccgtcgccgc ggctgacgct
      361 gcgcgtgcct cgttcggtca aggcgccgag ctcctcccac acgccgggat ctccgaactg
      421 caaggcgatg cgcccctcgc tcggcttgta aaatccggtg atgcagttga acaccgtcgt
      481 cttgccggcg ccgttgggtc cgatcagcgc ggtaatgtcg ccgcgccgcg ccgtgaagca
      541 aagatcgttg atggctacga gtccgccgaa gcgcatgctg aggtgctcga ccgcgagcac
      601 gggcgccaag ctcgaggccg gggccgtcgc gcttgcggga gccccggtcg tcgccgccgc
      661 acggcttgcc gcactcatct agggcgctcc cgcacgagcg aaggctgcgt cgtctgcgct
      721 ttctcctcct gcaagcgcga agagcggtgc gcgttcagca gcgtcgaggg tgcgcgcgtg
      781 gcgatgagcc cgcgcggtct ccagaccatg atcaagacca ttccgaagcc gaacagcagc
      841 atgcgatatt gggtgggatc gaaaccactg ccgaacaccg ccttgaggaa atcgagttcg
      901 cgcatgatct cggtgccgcc gatcatgatg acggcggcga tcgccacccc gagcaggctg
      961 cccatgccgc cgagcacgac gatggcgacg atcaccgcgg attccatgaa ggtgaagctt
     1021 tcgggcgaaa tgaatccctg ccgcgccgcg aagaacgatc cggcaaagcc ggcgaacatt
     1081 gcgcccatgg caaacgcggt gagcttggtg ttggtggtgt tgatgccgag cgaacggcag
     1141 gcgatctcgt cctcgcgcaa ggcctcccac gcccgcccga tcggcaggcg gcgcagccgc
     1201 accgtcatcg cggcggtgac gagcgcgagc gcgaggacga ggtaataaag aaagacggtg
     1261 cggtagaccg ggctgaactc gagcccgaaa cgggcggcaa agccttcgtc cgaggcgttg
     1321 aacggaatgc cgaagaaggt cggccgcggg atgctgctga tcccggcata gccgttggtc
     1381 accggaaccc agttgatcag gatgagccgg atgatctcgc caaaggcgag cgtcacgatg
     1441 gcgaggtagt cgccgcgcaa ccgcagcacg ggaaagccca gcagaatgcc ccagaacgcg
     1501 gccaggcagc cggcgagcgg aagcaggatc cagaacgaca ggccgaaggt gtccgccagc
     1561 aatgcgtagg aataggcgcc cacggcgtag aaggcgacgt agccgagatc gagcaggccg
     1621 gcgagcccga ccacgatgtt gagcccccag ccgagcatca cgtagatgag gatctgcacc
     1681 ccgaaattgt cgatccattt caccgcgccc tgggttccta cgatcgacag cgccagcgcc
     1741 ggatagacga tggcgaaacc cagcgcgaac ggaacgagcc agcggttgag ccgcgtgtgc
     1801 ggctttgccc gttcggtatc ctcgcgccgc tgccgcagcg cgcggcgggc gagccagggc
     1861 gcgatcagga tcgcgtacag gaagcgcccg gcggcgatga ttgccaccag cgccgccaac
     1921 aacggccagc gcgtctcgag cacgagctcg ttgcggatgt tttggacggt gttgaagccg
     1981 atcagcggca gcaaaagcgc gaatgcgatg acgccggtga tcgcggcttg gcgcagcgcg
     2041 ccagcgatat cgacgcgcga ggcgggcggt gacgcctcga gcgccatctc acactttctc
     2101 cacgtccggc cggccgagaa taccctgcgg caggaagatc atggtgatgg cgagaatgga
     2161 aaaggcggcg acatccttgt agtcgatgga gaaataagcc gaccacatgg tctcgatcag
     2221 gccgatcagc aacccgccga cgaccgcgcc cggcagtgag ccgatgccgc ccagcaccgc
     2281 cgcggtgaag gccttcacgc ccggcacgaa accgtcggcg aagctcacca cgccgtaata
     2341 catgaggtac atggtgccgg cgacggcggc gagcgccgcg gcgatgacga aagtgatcga
     2401 gatcgtgcgg tcgacgtcga tgccaagcag cgccgccatc ttctgatcct gctcgcaggc
     2461 gcgttgcgcg cgaccgagcg cggtcttgct caccaggaac cagaacacga acagcagggc
     2521 cgccgtcacc acccagacca cgatctgctt gtaggacacg gcgacttcgt aaccgctgct
     2581 ggccgaggtc agcacgatca cctcgttgaa gaacggcgga atggacttca cgcgcgggcc
     2641 ctgggcgacc tggacgaagt tcgacagaaa gatcgacatg ccgatcgccg agatcagcgg
     2701 cgcgagccgg aacgagccgc gcagcggccg ataggcgacg cgctcgatcg cccagttgag
     2761 gagggaggtg aagaacatcg cgacgacgag aacgatgaac agcgcgatca cgaacgagcc
     2821 gatgccgagc caagtcgtca gcagcaggaa cgcgatgagc gcgatgaagg cggagaccat
     2881 gaacacgtcg ccatgggcga agttcaccat gccgatgatg ccgaatacca tcgtgtagcc
     2941 gatggcgatg aggccgtaga tcgagccgag cgtgatgccg ttgatgagct gctggatgaa
     3001 gacttccata ccgcgcgcct cccctcgagg cgtccctcat gatccggcaa ccggtgaagc
     3061 cttaccaggg gcctgcacgg ccagcaacgg cggcgacggc acgccaaaat gcctgtggga
     3121 agcgggaatc acgcggcggc agggaaccga ggttcccgca tagtccggcg ccgtttggcg
     3181 atcttacttt cgcgcgtgac cacagcgggc ggcgcattga cacttgcctc cgcgagtgcc
     3241 tttctgccgg gcctgcgaag gaatctggac cgatgaagtc cgaggacgtc attgccgcca
     3301 aaggccggcc gttcacgggt gcggaatatc tcgccagcct gcgcgatggg cgtgatgtct
     3361 tcatctacgg cgagcgcgtc gaggacgtga ctacgcatcc cgcgttccgc aacgccgcgc
     3421 gttcgatcgc gcggctctac gacgccttgc atgaccccaa gaccaaggac gttctcacgt
     3481 ggcccaccga cactggatcg ggcggctaca cccacaaatt cttccgtgcc gcgcgctcgc
     3541 gtgaggaact cactgagcag cgcgatgcca tcgcccaatg ggcgcgcatg tcgtacggct
     3601 ggatggggcg ctcgcccgat tacaaggcct cgctgatgaa cacgctcggg gccaatcatc
     3661 gcttttacgg acgcttctcc ggcaacgcca gagcgtggta tcgccgcgcc caggaccacg
     3721 tgctgttcat gaaccacgcc atcgtcaatc cgccggtcga tcgcgccaag gcgtcggatc
     3781 aggtcaaaga cgtgttcatc gccattcaga aggagacgga cgccggtatc tatatctccg
     3841 gcgccaaggt ggtggcgacc tcctccgcgc tgacccatta caacttcctg ggccagaatg
     3901 cggcggtgcc tacgcatgac accgatctcg cggtgatgtt catcgcgccc atgaacacgc
     3961 ccggcgtgaa gctgttctgc cgcacctcgt acgaaatgat ggcgagcgtc atgggcacgc
     4021 cgttcgacta tccgctgtcc tcgcggttcg acgagaacga cgccatcttc gtgttcgaca
     4081 acgcgttcgt gccgtgggag gacgtgctgc tgcaccgcga tatcgagaag ctaaaaacct
     4141 ttttcccgca gtcgggcttc cttgccggtt atcagtttca gggttgcacg cggctcgcgg
     4201 tcaagctcga cttcttggtc ggggtcatcg ccaaggccct gcgcacgacc ggggccgacg
     4261 gcttccgcgg caaccaggcg atgctcggcg aggtgatcgc ctggcgaaat ctgttctggg
     4321 cactgaccga cgcgatggcc gccagtccca cgccctgggt cgacggcgcc gtgctgccca
     4381 acctgcaagc cggctcgagc tatcgcgtct tcgccggcga cgcctacggc cgcgtcaagg
     4441 agatcgtgga aaagatcatc gcgtccgcgc tcatctacct cccgtcgtcg gccagggatt
     4501 tcaagaatcc ggagatcgac aaatatctcg cgaaatacgt ccgcggctcg tacggcatcg
     4561 attacaagga gcgcatcaag gtgatgaagc tcctctggga tgcgatcggc accgagttcg
     4621 gcggccgcca cgagctctac gagatgaact acgccggcaa ccacgaggac attcgcatcc
     4681 aggcgatgtg gaatgcgcgc atgagcggca cgctcgacgg catgatcgcg ctcgccgacc
     4741 agtgccttgc ggactacgac gagaacggct ggcgcgacgc cgcctgggtc gacccggatg
     4801 acgtcgccta tccggccgtg gccggcgtca atcgcgccgc ggagtaggcg gcaatgagct
     4861 ggatcgacca acgccccgat gacgcgatgg acggcgcgtt caccgcggtc gggcccgagc
     4921 cggtgcgcac agtcgagccg
//
LOCUS       DATCWM010000043         3066 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_38162, whole genome shotgun sequence.
ACCESSION   DATCWM010000043 DATCWM010000000
VERSION     DATCWM010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3066
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38162"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            32..1435
                     /gene="lpdA"
                     /locus_tag="VIQ50_00790"
     CDS             32..1435
                     /gene="lpdA"
                     /locus_tag="VIQ50_00790"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008134171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEY9358939.1"
                     /translation="MMSYDLIIIGSGPGGYVCAIRAAQLGMKVAVVEKDDTFGGTCLN
                     IGCIPSKALLHASELFEEAGHMLDKMGINVGAPKLDLPAMMKFKDTGVDGNVKGVAFL
                     FKKNKIDTVHGIGRIAAPGKVEIKTADGKTETVEGKAIVIATGSDVARLPGIDIDERR
                     IVSSTGALVLARVPERLLVVGAGVIGLELGSVWRRLGSEVIVVEWLDRILPGIDNEVC
                     RQVQRIFERQGMKFRLSSKVAGVETGGKKLKVTIEPAAGGTAESIEADVVLVAIGRVP
                     FTEGLGLETAGVRMDNKRRIIVDARFATNVPGIYAIGDVIAGPMLAHKAMDEGTAVAE
                     LLAGQAGHVNYDVIPNVVYTYPEIASVGKSEEELKEAGTAYKVGKFPFTANGRAKANL
                     QTDGFVKILAEAKTDRVLGVHIVGADAGNMIAEAAVAMEFGAASEDIARTCHPHPTFT
                     EAVKEAALAVDKRAIHM"
     gene            complement(1567..2208)
                     /locus_tag="VIQ50_00795"
     CDS             complement(1567..2208)
                     /locus_tag="VIQ50_00795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4337 domain-containing protein"
                     /protein_id="HEY9358940.1"
                     /translation="MSHGVHAVQHEVEHHIEHEEHGHGGRGKPVGESRNKKIALLISI
                     IALFLALAEMFGKSAQTEGISLNIKASDTWNFFQAKTIRQTALRTAAQALTVEAELSD
                     EPRKAALLKQADDWIKTVARYESDPAEKDGRKELRAQAEAYERARDTQLARYHHYEFA
                     AAAYQIGIVLASAAVITGMVALVYAAIGLGVIGLAFMALGFFNPHYLHSLHLI"
     gene            complement(2276..>3066)
                     /locus_tag="VIQ50_00800"
     CDS             complement(2276..>3066)
                     /locus_tag="VIQ50_00800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013913417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009037 - tyrosine-based site-specific
                     recombinase activity [Evidence IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA];
                     GO_process: GO:0007049 - cell cycle [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HEY9358941.1"
                     /translation="SRPTLSALSRLKPLDVRAFMSARRADGVSSRSLMRILAGVRSFA
                     RFLERAGKGKIGALAAVRTPKLAKTLPKPLAVTAAKRITDTELRAGEERAPWIIARDA
                     AVLALLYGSGLRVSEALALKRRDLPAAGRGDTITVTGKGNKPRMVPVLAQVTRLAAEY
                     IALCPYDLPAEGPLFVGARGGPLSARVVQLAMARLRGALGLPDTATPHALRHSFATHL
                     LARGGDLRAIQELLGHASLSTTQIYTAVDAERLMEVYRNAHPRA"
BASE COUNT          559 a          970 c         1014 g          523 t
ORIGIN      
        1 tacctaagct ggacaaagaa agatgtgatg catcatgtcc tacgacctca tcatcatcgg
       61 ctccgggccc ggcggctatg tctgcgctat ccgcgcagcg cagctcggca tgaaggttgc
      121 ggtggtcgag aaggatgaca ccttcggcgg cacctgcctc aacatcggct gcattccgtc
      181 gaaggcgctg ctgcatgcct cggagctctt tgaagaggct ggccacatgc tcgacaaaat
      241 gggcatcaac gtcggcgcgc cgaagctcga ccttcccgcc atgatgaagt tcaaagacac
      301 gggcgtcgac ggcaacgtca aaggcgtcgc tttcctgttc aagaagaaca agatcgatac
      361 cgtgcacggc atcggccgca tcgccgcacc cggcaaggtt gagatcaaga ccgccgacgg
      421 caagacggag accgtcgagg gcaaggccat cgtcattgcc accggctcag acgtagcgcg
      481 cttgcccggc atcgacatcg acgagcggcg aatcgtgtcc tcgaccggtg cgctggtgct
      541 cgccagagtg ccggagcggc tgctcgtcgt cggcgccggc gtcatcgggc tcgagctcgg
      601 ctcggtgtgg cgccggctcg gctccgaggt gatcgtggtc gaatggctcg accggatctt
      661 gccgggaatc gacaacgagg tctgccggca ggtccagcgc atcttcgaaa gacagggtat
      721 gaagttcagg ctgtcgtcca aggttgccgg cgtcgagacg ggaggaaaga agctcaaggt
      781 gacgatcgag ccggcagccg gcggcacggc ggaatcgatc gaagccgacg tggtgctggt
      841 ggcaatcggc cgggtgccgt tcaccgaggg gctcggcctc gaaaccgccg gggtgaggat
      901 ggacaacaag cgccgcatca tcgtcgatgc gcgtttcgct accaacgtgc cgggcatcta
      961 cgccatcggt gatgtcatcg ctggcccgat gctggcgcac aaggcgatgg acgagggcac
     1021 ggcggttgcg gaactcctcg ccgggcaagc cggccacgtg aactacgacg tcattccaaa
     1081 cgtggtctac acgtatcccg agatcgcctc ggtcggcaaa agcgaggagg aattgaagga
     1141 ggccggcacc gcttacaagg tcggcaagtt tccgttcacc gccaacggcc gcgccaaggc
     1201 gaacctgcaa acggacggct tcgtgaaaat cctggccgag gccaagaccg accgcgtgct
     1261 gggcgtgcac attgtcggcg ccgacgccgg caacatgatc gcggaggctg cggtcgctat
     1321 ggaattcggc gccgcgtccg aagacatcgc ccgcacctgc cacccgcacc cgaccttcac
     1381 cgaagcggtg aaggaggcgg cactggcggt cgacaaacgc gccattcaca tgtgatgccg
     1441 acttggattc gtcatgcccg cgcttggtgc gggcatccac gtctttgggg cagctcacta
     1501 agaggtggag ggccgggacg agcccggccc tgacggatct gtcgttcgaa ttgaacggaa
     1561 catactctag atcaaatgca gagagtgcag gtaatgcggg ttgaaaaacc cgagcgccat
     1621 gaaggccagg ccaatcactc cgaggccgat cgcggcatag accagcgcca ccatacctgt
     1681 gatgacggct gccgacgcca gcacgatgcc gatctggtag gccgctgccg cgaactcgta
     1741 gtgatggtag cgcgccaatt gcgtgtcgcg cgcacgctcg taggcttccg cctgcgctcg
     1801 caattccttg cggccgtcct tctccgccgg atcggactca tagcgcgcca cggtttttat
     1861 ccagtcgtcc gcctgcttca gtagcgccgc tttgcggggc tcgtcggaga gttcggcttc
     1921 gacggtcaaa gcctgggcgg cggtgcgcag cgctgtctga cggatggtct tggcttggaa
     1981 gaaattccag gtgtccgacg ccttgatatt gagcgaaatg ccctcggtct gcgcgctctt
     2041 cccgaacatt tcggcgagcg ccaggaagag cgcgattatc gagatcaaca gcgcgatctt
     2101 cttgtttctg ctctcgccga caggctttcc gcggccgccg tgtccgtgtt cctcatgttc
     2161 gatgtggtgc tcgacctcgt gctggaccgc gtgcacgcca tgactcatgt cacccctccg
     2221 cgcttcgctc gcggacgatg tatcgaaccg gccggcttac gcaaggggcg ttcgctcacg
     2281 ctcgagggtg ggcgttgcgg taaacttcca tcagccgctc ggcgtcgacc gcagtgtaga
     2341 tctgggtggt ggacaaggag gcatggccga gcagctcctg gatcgcgcgc agatctccgc
     2401 cgcgcgccag cagatgcgtc gcgaacgaat ggcgcaacgc atgcggggtc gcggtatccg
     2461 gcagcccgag cgcgccgcgc agccgcgcca tcgcgagctg gacgacgcgc gctgacaacg
     2521 ggccgcctct ggcgccgacg aacaacggac cttcggcggg aaggtcatag gggcaaagcg
     2581 cgatgtattc ggccgcgagc ctcgtgacct gcgccagcac cggcaccatg cgcggcttgt
     2641 tgcccttgcc ggttaccgtg atggtgtcgc cgcgccccgc ggccggaaga tcgcggcgct
     2701 tgagcgccag cgcctcgctc actcgtaatc ccgagccgta gagcaaggcc agcactgcgg
     2761 cgtcgcgggc gataatccat ggcgcgcgct cctcgccggc gcgtaactcg gtgtcggtga
     2821 tgcgcttggc agccgtgacc gcgagcggct tcggtagcgt cttcgccagt ttcggcgtgc
     2881 gcacggcagc aagcgcgccg atcttgcctt tgccggcgcg ttcgagaaag cgagcgaagg
     2941 accgcacgcc cgccagtatg cgcatgagcg agcgactgct gacgccgtcg gcacgccgcg
     3001 ccgacatgaa cgcgcgcacg tcgagcggct tgaggcgcga caacgccgaa agcgtcggcc
     3061 ggctgc
//
LOCUS       DATCWM010000044         2916 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_259515, whole genome shotgun sequence.
ACCESSION   DATCWM010000044 DATCWM010000000
VERSION     DATCWM010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2916)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2916)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2916
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_259515"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..276
                     /locus_tag="VIQ50_00805"
     CDS             <1..276
                     /locus_tag="VIQ50_00805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9358942.1"
                     /translation="LRLAAGPTRYARDVTHVPGDPALPFDRARVREKFLRFTQPVLGA
                     ETAERILARCGSVVATGEFSQLMDEIERACSTASPSPSGEQAAGSGS"
     gene            422..1396
                     /locus_tag="VIQ50_00810"
     CDS             422..1396
                     /locus_tag="VIQ50_00810"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9358943.1"
                     /translation="MFRRIIPVASFLIQLAYAAIASSTPARAIDEIEMGSVGGPTALL
                     WPLYIGTATGMFAAENLDIKQIFAPSSAGVQQQLAAGAFQISDSGLIDQVRAIFEGAP
                     IALVRIEGQVPPYALLAQRTIKTIAELRGKTIMVGGEKDITRVYLERMLTPNGVKAGE
                     YDLLYAGSTLARFAALQSGAVSAAILFPPLNFRAEAAGFTNLGFIVDYAKNLPFSGIS
                     VNTSWATRNKERLERFLAAYTKAVVWLNDGNNRSEAVRILVEASKQSPEDTEKSYDMY
                     RKIDFFETKGEVSKKKVAEIIDILRSDMRDKPLDINRLFLPNVTRVTE"
     gene            complement(1430..2422)
                     /locus_tag="VIQ50_00815"
     CDS             complement(1430..2422)
                     /locus_tag="VIQ50_00815"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9358944.1"
                     /translation="MKTAIARRRLMELTAAFAASTAVAHNVQAQAYPNRTIRLIAPFP
                     AGGGTDSAARIIAARLSELLGQQVVVDNRPGAGSNIGAEAAARSAPDGYTLLLGAPAL
                     AINRFLYASVNYDSVTDLAPVSLLCRYPNILAVSVSSPLTSVRSFIDYARANPGKVTY
                     SSPGIGTTPHLSGELLKHMAGIELIHVPYRGAGAGAITDTIAGRVDSAINTSGSLLQT
                     VRSGQLRGLAVTTLKRFPTAPELPTIAESGIPGFDVSAWYALFVPAKTPPEIIARLNA
                     ATVTALSEPAVRARFEPLGVVVESSTPEGLEALLQSEIDKWGPIIKAAGISASN"
     gene            complement(2653..>2916)
                     /locus_tag="VIQ50_00820"
     CDS             complement(2653..>2916)
                     /locus_tag="VIQ50_00820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9358945.1"
                     /translation="GQAVIAQIRKAAEFANENCDRAMALAHKLSMQLRAAEDRINQLQ
                     AEVELFRDRAARAERWLQTIQKEIEERLIAPRSVSGESQPVRG"
BASE COUNT          558 a          864 c          919 g          575 t
ORIGIN      
        1 ctgcgccttg ccgccggccc gacgcggtac gcgcgcgacg tgacccacgt tcccggcgat
       61 cccgcgctcc ccttcgatcg cgcgcgcgtg cgggaaaaat ttctgcgctt tacgcaaccg
      121 gtgctcggcg cggaaacagc cgagcgcatc ctcgcgcgtt gcggcagcgt ggtcgcaacg
      181 ggtgagtttt cccaattgat ggacgagatc gaacgggctt gttcgacggc ctccccctcg
      241 ccgtcggggg agcaggcggc gggcagcgga agctgagcgt ctttcatttc cgctcaccag
      301 cgatccccac ggcgcactca tccgcggggc aggcttttga ctcgtcgtaa ctcgttgccc
      361 taagttggtc cggacgcgcc cttgtttgga gcgatcaacc atctcgaatc gagaacacgc
      421 catgttcagg cgcatcattc cggtcgcttc cttcctgatc cagctggctt atgcggcgat
      481 tgcatccagc acgcccgcac gggcaattga cgagatcgag atgggctcgg tcggcggtcc
      541 gacggcgttg ctttggccgc tttacatcgg caccgccacg ggcatgttcg ccgccgaaaa
      601 cctcgacatc aagcagattt ttgcgccctc aagcgcaggc gttcaacaac agttggcagc
      661 cggcgcgttt cagatctccg attccggcct catcgatcag gtgcgggcga ttttcgaagg
      721 ggcgccgatt gcactcgtcc gcattgaagg gcaggtgccg ccctatgcgc tgctcgccca
      781 gcggacgatc aagaccatcg cggagttgcg cggcaagacc atcatggtcg ggggcgaaaa
      841 ggacatcacg cgggtttatc tcgagcgcat gttgacgccg aacggcgtca aggccggcga
      901 atacgatttg ctgtatgcgg gatcgacgct ggcgcgattt gccgcgctcc agtcgggcgc
      961 ggtctcggcg gccattctgt ttccgccttt aaacttccga gcagaggccg cgggcttcac
     1021 caatctgggc tttatcgtcg attacgccaa gaatcttccg ttctcgggga tttcggtcaa
     1081 tacgtcgtgg gcgacccgca acaaagaacg ccttgaacga tttctcgccg cctatacgaa
     1141 ggccgttgtc tggctcaacg acggcaacaa tcgcagtgag gcggtcagga ttttggtcga
     1201 ggccagcaaa caatcgccgg aggataccga gaaatcctac gatatgtacc ggaagatcga
     1261 tttcttcgaa acgaaaggcg aagtttcaaa gaagaaagtt gccgagatca tcgacattct
     1321 cagaagcgac atgcgcgaca agccgctcga tatcaatcgg cttttcctgc cgaacgtgac
     1381 gcgggtgacc gagtagcccg gcagctcgag cctcgttgcc gactcgtgct caattacttg
     1441 cgctgatgcc ggcggccttg attatcggac cccacttgtc gatttcagac tgaagcagcg
     1501 cttcgagccc ttcaggcgtc gagctttcga caacgacgcc gagtggctcg aacctggccc
     1561 tcaccgcggg ttcggataat gccgtgacgg ttgcggcgtt cagcctagcg atgatctcgg
     1621 gcggggtctt agccggcacg aacagcgcat accaggccga cacgtcaaag ccgggaatcc
     1681 cggactccgc aatggtcggc agttccggcg cggtcgggaa acgtttcagc gtggtgacgg
     1741 cgagcccgcg cagttgcccg gagcgcacgg tttgcagcag ggagccgcta gtattgatag
     1801 ccgaatcgac gcggccggcg atggtgtcgg taatggcacc ggcgccagca ccgcgatagg
     1861 gcacgtggat gagctcgatg ccggccatgt gcttaagcaa ttcaccggac aggtgcggcg
     1921 tggtgccgat ccccggggag gaataagtca ctttgcctgg attggccctg gcgtagtcga
     1981 tgaaactgcg gaccgaagtc agcggcgacg ataccgacac cgcgaggatg ttcggatagc
     2041 ggcagagcaa tgacaccggc gcgagatcgg tgacggaatc gtagttgact gaagcataaa
     2101 gaaagcggtt gatcgcaagc gccggcgcac cgagcagcag ggtgtagccg tcaggcgccg
     2161 agcgcgcggc ggcctcggcg ccgatgttgc tgccggcgcc aggccggttg tcgaccacta
     2221 cctgctggcc cagcagctcc gacaagcgag cagcgatgat gcgggctgcg gagtcggtgc
     2281 cgccaccggc cgggaacggc gcgatcagcc gaatggtccg gttcgggtaa gcctgcgctt
     2341 gaacgttgtg agcgactgcg gttgatgctg cgaacgccgc ggtaagctcc atcagtcggc
     2401 ggcgggcaat cgctgttttc atggggcgcg acgcaattct aaaatggcaa tctcgcgagc
     2461 gcgcatagta gcacacctaa cgaacttcat cgtctgtcgc ggcgcagtcg ggcaatctga
     2521 gcgtcgaagg gatcatctca caggtgatcg ccggaggcgc tggcggcgcc atactcacgg
     2581 cgatcattgg cgcaatcaag aacaaagctg ctgcctgacg ggcaactgga tgatgtacct
     2641 ttcgaggata agctaacctc gcacgggttg gctttcaccg gagactgatc tcggagcgat
     2701 gagcctttcc tctatctctt tctgaattgt ttgaagccaa cgttcggcgc gtgctgcgcg
     2761 gtctcggaag agttcgacct cggcctgtaa ttgatttatt cgatcttcgg cggctctgag
     2821 ctgcatcgaa agcttgtgcg ccagcgccat ggcgcggtcg cagttttcat tcgcaaactc
     2881 ggccgctttt cggatttgcg caatgacggc ttgtcc
//
LOCUS       DATCWM010000045         3398 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_518646, whole genome shotgun sequence.
ACCESSION   DATCWM010000045 DATCWM010000000
VERSION     DATCWM010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3398
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_518646"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..609)
                     /gene="holA"
                     /locus_tag="VIQ50_00825"
     CDS             complement(<1..609)
                     /gene="holA"
                     /locus_tag="VIQ50_00825"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HEY9358946.1"
                     /translation="MVALKTSEIERFLARPDRPVVLVFGPDAGLVRERAEALVRGSVD
                     DPKDPFQLARLDGDELASEPTRLVEEANTIPLFGGRRAVWVKAGSRNFAPALEALVAA
                     PPPDCRVVIEAGDLKRNAPLRAVCERAKQAVALPCYPDAERDLLRLIDDELREFELTI
                     SPDARAALLPLLGGDRLASRHEIRKLALFARGKARVELDDVVA"
     gene            complement(712..1239)
                     /locus_tag="VIQ50_00830"
     CDS             complement(712..1239)
                     /locus_tag="VIQ50_00830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9358947.1"
                     /translation="MRAIAALAIAALTGGCFQPLYGEQSPTGGPVLRDQLSAVDILQI
                     AAPKGTDEARIAVEIRNALLYDFTGGGYAAPPTHRLKISIASTRVSIIVDVNTSRPDV
                     ENYGLNASYTLTEIATGKIVVTGTTFARVSYDIPGQEQRFARMRGLRDAELRAAKVIA
                     DNVRSRLASYFIAGT"
     gene            complement(1310..>3398)
                     /gene="leuS"
                     /locus_tag="VIQ50_00835"
     CDS             complement(1310..>3398)
                     /gene="leuS"
                     /locus_tag="VIQ50_00835"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HEY9358948.1"
                     /translation="SGALVEQREMPQWYFGITKFSEDLLQALDRLDRWPEKVRVMQRN
                     WIGRSEGLLVRFALDAATTPNGEDALEVFTTRHDTLFGAKFMALSPDHPLAAAAAAKN
                     PALAQFIADCKRHGTAQQLIDTAEKKGFDTGMKAVHPFDSGWKLPVYVANFIVMDYGT
                     GAIFGCPAHDQRDLDFANKYGLGNTPVVCPLGQEPSTFVITDSAYDGEGRMINSRFLD
                     GMTVEEAKAEVARRLEHASRGNWPVATRQVNFRLRDWGISRQRYWGCPIPVIHCERCG
                     IVPVPESELPVTLPDDVDFDRPGNPLDRHPTWKNVACPTCGGPARRETDTMDTFVDSS
                     WYFIRFTDPWTTRPTNRPVADRMMPVDQYIGGIEHAILHLLYSRFFTRAMRATGHVDL
                     DEPFTGLFTQGMVVHETYQAANGEWVMPAEVKVEGAGDARRATLIATSEAVAIGPIEK
                     MSKSKRNTVDPDDIIASYGADTARWFMLSDSPPERDVIWTEEGVQGAWRFVQRLWRLV
                     REAAEVAAPADAPRPSRFGEPALALRKAAHHALARVSEDIERLRFNVCVAHIYEFANA
                     FQASLADLESEPGADYRWAVREAAVILVSLFQPMMPHLAEECWAALGHKTLVASEAWP
                     KLEADLLIESTITLPVQINGKKRGDVTVARNAAKTEIESAVLALDAVKRALDGKPPKK
                     VIVVPQRIVNVVA"
BASE COUNT          591 a         1090 c         1114 g          603 t
ORIGIN      
        1 cgccacgacg tcgtccaact cgacgcgcgc cttgccgcgc gcgaagagcg cgagcttgcg
       61 gatttcatgg cgcgacgcga gacggtcgcc gccgagcaga ggaaggagcg cagcgcgcgc
      121 gtccggcgaa atggtaagct cgaattcgcg caactcatca tcgatgagcc ggagcaagtc
      181 tctttccgca tcggggtagc acggcagcgc cacggcctgt tttgcgcgct cgcagacggc
      241 gcgtagcggc gcattgcgct tgagatcgcc ggcctcgata acgacgcggc agtccggcgg
      301 gggagcggcg acgagcgcct ccagcgcggg agcaaagttg cgcgagcccg ctttcaccca
      361 gaccgcgcgg cggccgccga acagtggaat cgtgtttgcc tcttcgacaa ggcgcgtcgg
      421 ctcgctcgcg agctcatcac catcgaggcg cgcgagttga aacggatcct tcggatcgtc
      481 gactgatccg cgcaccagcg cttccgcgcg ctcgcgcacc aggcccgcgt cgggtccgaa
      541 gaccagcacg accggccgat cggggcgggc gaggaatctc tcgatctccg aggttttcag
      601 cgcgaccatg aaatctatcg ccaggacctc tcgccggtgt ccgcgcgagc gaatcgtggc
      661 cgcggccgcc gcgaccaagt tacttgcgac agaggatcgc gaggtgagct cttacgtccc
      721 ggcgatgaaa tacgacgcaa gccgagacct gacattgtcg gcgatcactt tcgcagcacg
      781 cagttcggcg tcccgcaatc cgcgcatgcg ggcgaatcgt tgttcctggc ccggaatgtc
      841 ataggacacg cgggcgaacg tcgtgccggt caccacgatc ttgccggtcg cgatttcggt
      901 caacgtgtag ctggcattga gcccgtagtt ctcgacatcc ggccgcgagg tgttgacatc
      961 gacgatgatc gacactcgcg tcgaggcgat ggagatcttc agccgatggg ttggcggcgc
     1021 tgcatagccg cccccggtga agtcgtagag gagcgcgttg cggatttcga ccgcgatccg
     1081 cgcttcatcg gttcccttcg gcgccgcgat ctgcaggata tcgacggcgc tgagttggtc
     1141 gcgcaggacc ggcccgccgg tgggggactg ctcgccataa aggggctgga aacagccgcc
     1201 cgtgagcgcg gcaatcgcca gcgcggcgat ggcccgcaac agtctcggct gcgatggggc
     1261 gcatggcgcg tgcgcgccgt cgcattctcc ccggccggcc gagcccccct catgccacca
     1321 cattgacgat cctttgcggt accacgatca ctttcttggg cggcttccca tcgagcgccc
     1381 gttttactgc atcgagcgcc aaaacggcag actcgatctc ggtcttcgca gcatttctgg
     1441 cgactgtgac atcgccgcgc ttcttaccat tgatttggac cggaagtgtg atcgtgctct
     1501 cgatcagaag atccgcctcc agcttcggcc aagcctctga cgcaactagc gttttatggc
     1561 caagcgcggc ccagcactcc tccgccaggt gcggcatcat gggctggaaa agcgaaacca
     1621 ggatgacggc cgcttcccgt accgcccagc gatagtcggc ccctggctca ctctcgaggt
     1681 ccgcaagcga ggcctggaag gcattggcaa attcgtagat gtgggcgacg cacacgttga
     1741 aacgcaggcg ttcgatgtcc tccgacacgc gcgccagcgc gtggtgggcg gccttgcgca
     1801 gtgccagcgc cggctcgccg aagcgcgacg ggcgtggcgc atcggcgggg gcggcgacct
     1861 ctgccgcctc gcgcacaagc cgccacagcc gttgcacaaa acgccaggca ccctgcacgc
     1921 cctcctcggt ccagatcaca tcgcgctcgg gaggcgaatc ggacagcatg aaccagcgcg
     1981 cggtatcggc gccgtagctg gcgatgatgt cgtccgggtc gaccgtgttg cgtttcgact
     2041 tcgacatctt ctcgatggga ccgatcgcca ccgcttcgct ggttgcaatc agcgtggcgc
     2101 gccgcgcgtc gcccgcgcct tccaccttca cctcggcggg catgacccac tcgccgttcg
     2161 ccgcctgata ggtttcgtgc accaccatgc cctgcgtgaa caatccggtg aacggctcat
     2221 cgaggtcgac gtgtccggtc gcgcgcatgg cgcgggtgaa gaagcggctg tagaggagat
     2281 gcaggatagc gtgctcgata ccgccgatgt attgatcgac cggcatcatc ctatcggcga
     2341 ccgggcggtt ggtggggcgc gttgtccacg gatcggtgaa gcggatgaaa taccaggacg
     2401 agtcgacgaa cgtgtccatg gtgtcggtct cgcgccgagc cggcccgccg caagtcgggc
     2461 acgcgacatt tttccaagtg ggatgacggt caagcggatt gcccggtcga tcgaaatcga
     2521 cgtcgtcggg caaggtgacc ggaagctcgc tctcaggcac gggcacgatg ccgcagcgct
     2581 cacagtggat taccgggatc gggcaacccc agtagcgttg gcgcgaaatg ccccagtcgc
     2641 gcagccggaa attgacttgg cgtgtggcca ctggccaatt gccgcgcgat gcgtgttcaa
     2701 gacggcgcgc gacctccgcc ttcgcctctt cgacggtcat gccgtcgaga aagcgcgaat
     2761 tgatcatgcg cccctcaccg tcataggcgc tatcagtgat gacgaaggtg ctgggttcct
     2821 ggcctagcgg gcagaccacg ggcgtgttgc cgaggccgta tttgtttgcg aagtcgaggt
     2881 cgcgctggtc gtgtgcgggg cacccgaaga tcgcgccggt gccgtagtcc atgacgatga
     2941 aattggcgac gtagaccgga agcttccaac cgctatcgaa gggatggaca gccttcatcc
     3001 cggtgtcgaa acccttcttt tctgcggtat cgatcaattg ctgcgcggtg ccgtggcgtt
     3061 tgcagtcggc gataaattgg gcgagcgcgg ggttcttggc cgccgccgcg gccgccaacg
     3121 gatggtcggg cgagagcgcc atgaacttgg cgccgaacag cgtgtcatgg cgcgtggtga
     3181 agacctcaag cgcgtcttcc ccgttcggag tcgtcgccgc atcgagcgca aagcggacga
     3241 gcagcccctc cgagcggccg atccagttgc gctgcatgac gcgcaccttc tcgggccagc
     3301 gatcgagccg gtcgagcgct tgcagcaaat cctcggaaaa tttcgtgatg ccgaagtacc
     3361 attgcggcat ctcgcgttgc tcgaccagcg cgcccgag
//
LOCUS       DATCWM010000046         5006 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_210917, whole genome shotgun sequence.
ACCESSION   DATCWM010000046 DATCWM010000000
VERSION     DATCWM010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5006
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_210917"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            30..1163
                     /gene="aroB"
                     /locus_tag="VIQ50_00840"
     CDS             30..1163
                     /gene="aroB"
                     /locus_tag="VIQ50_00840"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HEY9358949.1"
                     /translation="MTAPLRAGDPSVVNVALGERSYDIIIGRGQLASLGEKIAALRPG
                     AKAAIVSDEMVARHHLAATEAALAAAGIGTTSVTVPAGESSKSFAMLERVCEALISAR
                     IERADVVVALGGGVIGDLGGLAAALVRRGLDYVQVPTTLLAQVDSSVGGKTAIDSTHG
                     KNLVGAFHQPVLVLADTALLDTLPVRQFRAGYAEIVKYGLLGDAGFFAWLEANWRELF
                     AGGAAREHAIAVSCRMKASIVARDEREHGERALLNLGHTFGHALEAAAGFSDRVLHGE
                     AIALGMTLAFAFSAERGLLPRSDAERVERHLAAVGLPIHLSSVPGGPPDADRLMELIA
                     QDKKVKRGRLTFILARAIGASFVAPDVDAAEVRAFLVEKLAER"
     gene            1160..2449
                     /locus_tag="VIQ50_00845"
     CDS             1160..2449
                     /locus_tag="VIQ50_00845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HEY9358950.1"
                     /translation="MTAYDWITLVVIVFCIFLSAFFAGSETALTASSRASMHRLDKQG
                     NRRAVLVNHLLNARERMIGALLFGNNAVNIAASALATGLLLDWFGEVGVVYATIVMTV
                     AIVVFAEILPKTAAFNAPNRIALAVARPIDWTVRLLAPILVAVEWIVKKALRLFGVKL
                     GQTESILSPHEELRGAVDLLHGTGGVETLDRDMLRGLLDLRDLTVSDVMIHRTEMVTV
                     CADDPPEQVVKAVLESEVTRVPLWKDKPENIIGILHAKDLLRAMQVAEGDLSKIDVTA
                     IVRPPWFVPDIRPLSEQLKAFRRRKTHFALAVDEYGEVMGLITLEDILEEIVGDISDE
                     YDVAVPGVRPQPDGSVNIDGGVPIRDLNRAMEWNLPDDEATTVAGLVIHEARSIPEPG
                     QTFTFHGFRFRVLRRDRNRITALRITPLVRKPVAKLA"
     gene            complement(2486..2761)
                     /locus_tag="VIQ50_00850"
     CDS             complement(2486..2761)
                     /locus_tag="VIQ50_00850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018452926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HEY9358951.1"
                     /translation="MATRDIIAEKLTKAFAPANLKVIDESHQHAGHAGHREGGETHFR
                     VYIVAEAFRGKSRLERHRMVNETLVAELKGGVHALAIHAAAPGEAGA"
     gene            2872..3507
                     /locus_tag="VIQ50_00855"
     CDS             2872..3507
                     /locus_tag="VIQ50_00855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HEY9358952.1"
                     /translation="MKSDSPLFDRIRVKPDKDRRQRAECPACEWPNCQAPATHRAPKG
                     RLREREYWRFCLEHVREYNHAYNFFAGMSTEDIARFQKEAVIGHRPTWKMGMHGGRPA
                     ARSHSSRRPSEFTGADDPFGVFREFGGAGSAWRGTQRHVAESRTVRNAERKALDALGL
                     EADASVQDVKRQFKALVKRHHPDANGGDRSSEDRLREIIQAYTYLKSIGFR"
     gene            3858..4844
                     /gene="cobS"
                     /locus_tag="VIQ50_00860"
     CDS             3858..4844
                     /gene="cobS"
                     /locus_tag="VIQ50_00860"
                     /EC_number="6.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051116 - cobaltochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobaltochelatase subunit CobS"
                     /protein_id="HEY9358953.1"
                     /translation="MTAATQEIANLPDMKVSIRQLFGFDSDMEVPAYSEADAHVPDVD
                     PDYRFDKPTTLAILAGFAHNRRVIVTGYHGTGKSTHIEQVAARLNWPCVRVNLDSHIS
                     RIDLIGKDAIVIRDGMQVTEFRDGILPWAYQHNVALCFDEYDAGRPDVMFVIQRVLES
                     SGRLTLLDQSRVVRPHPAFRLFATANTVGLGDTSGLYHGTQQINQAQMDRWSIVTTLN
                     YLPHDNEVDIVLAKAKHYRTDQGRDVVNKMVRVADLTRNAFMNGDISTVMSPRTVITW
                     AENADIFKDIGFAFRLTFLNKCDELERPIVAEFYQRCFGVELPESSVNVALT"
     gene            4870..>5006
                     /locus_tag="VIQ50_00865"
     CDS             4870..>5006
                     /locus_tag="VIQ50_00865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008966343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9358954.1"
                     /translation="MMASNIRPRNPSKESPTEPFKRAVTGCLRAIARKPELEVAFAAE
                     RP"
BASE COUNT          877 a         1626 c         1569 g          934 t
ORIGIN      
        1 gccgcgcctg cgccaggaga ccgccagcca tgaccgcgcc attgcgcgca ggcgatccga
       61 gcgtggtcaa cgtcgcgctg ggcgagcgca gctacgacat catcatcggt cgtggtcagc
      121 tggcgtcgct gggcgaaaaa atcgccgcgc tgcggcccgg ggccaaggcg gcgatcgtca
      181 gcgacgaaat ggtcgcacgc caccacctcg ccgcgaccga ggccgccctc gccgctgccg
      241 ggattggcac aacctcggtg acggtgccgg cgggcgagag ttcgaagagc ttcgccatgc
      301 tcgagcgggt ttgcgaagca ctcatttccg cgcgcatcga gcgcgccgat gtcgtggtgg
      361 cgctcggtgg cggggtcatc ggcgatctcg gcggtcttgc cgccgccctc gtgcggcgcg
      421 gcctcgatta tgtgcaggtc cccaccacgc tgcttgccca agtcgattcc tccgtcggcg
      481 gcaagacggc aatcgattcc acgcacggca agaatctcgt cggcgcgttc catcagccgg
      541 tgttggtgct ggccgatacc gcgctgctcg acacgctgcc ggtgcggcaa ttccgcgccg
      601 gctatgccga aatcgtcaaa tacggcctac tcggagatgc cggcttcttc gcctggctgg
      661 aggcaaactg gcgggagctg ttcgcaggcg gcgccgcgcg cgagcacgcc attgcggtga
      721 gctgtcgcat gaaggcttca atcgtcgcgc gtgacgagcg cgagcacggc gagcgggcgc
      781 tgctcaatct cggccatacc ttcggccacg cgctcgaggc cgcagccggt ttttccgacc
      841 gggtcttgca cggcgaagcg attgcgctgg ggatgacact ggcgtttgcc ttctccgccg
      901 aacgcgggct gctcccgcga tcggatgccg agcgcgtcga gcgccatctt gcggcagtcg
      961 gcctgccgat ccatctctcc tccgttcccg gtggtccgcc cgatgccgac cgcctcatgg
     1021 aactcatcgc ccaggacaag aaggtcaagc gcggcaggct gacgttcatc ctggcacgtg
     1081 cgatcggcgc aagcttcgtc gcgcctgatg tcgatgccgc cgaggtccgt gcctttctag
     1141 tcgagaaact cgccgagcga tgactgccta cgattggatc accctcgtgg tgattgtctt
     1201 ttgtatcttt ctctccgcct tcttcgcggg aagcgagacc gcgttgaccg cgtcctcgcg
     1261 cgcgagcatg catcgcctcg acaaacaggg gaatcggcgc gctgtgctgg tcaaccacct
     1321 gctgaacgcg cgcgaaagga tgatcggtgc gctcctgttc ggcaacaacg ccgtcaacat
     1381 cgcggcttcg gcgctggcga ccggcctgct gctcgactgg ttcggcgaag tgggcgtcgt
     1441 ctatgccacc attgtcatga cggtggcgat cgtggtgttc gcggagatcc tgccgaagac
     1501 cgcggcgttc aatgcgccca accgtatcgc gcttgctgtc gcgcgcccga tcgattggac
     1561 ggtccggctg ctcgcgccga tcctcgtcgc agtcgaatgg atcgtgaaaa aggcgctgcg
     1621 tcttttcggc gtgaagctcg gtcaaaccga gtcgatcctt tcgccgcacg aggaattgcg
     1681 gggagcggtc gacctgttgc acgggaccgg cggcgtcgag acgctcgatc gcgacatgct
     1741 gcgcgggctc ctcgatttgc gcgacctcac ggtctccgat gtcatgatcc accgcaccga
     1801 gatggtcacg gtctgcgccg acgatccacc cgaacaggtg gtcaaggcag tgctggaatc
     1861 agaggtcacc cgcgtgccgc tgtggaagga caagcccgag aacatcatcg gcatcctgca
     1921 tgctaaggat cttctgcggg cgatgcaggt ggccgagggc gatctcagca agatcgacgt
     1981 gaccgcaatt gtgcggccgc cttggttcgt gccggacatc cgtccactct ccgagcagtt
     2041 gaaagccttc cgccggcgca agacgcattt cgcgctggcg gtcgacgaat acggcgaggt
     2101 gatggggctg atcacgctcg aggatatctt ggaagagatc gtcggcgata tctcggatga
     2161 gtatgacgtc gcggtgcccg gcgtacggcc gcagcccgac ggctcggtca acatcgacgg
     2221 cggcgttccg atccgcgatc tcaatcgcgc gatggaatgg aatctgcccg atgacgaggc
     2281 gaccaccgtc gctggtctcg tcatccatga ggcgcgctcc atccccgagc ccggccaaac
     2341 cttcaccttc catggttttc gcttccgtgt gctgcgccgg gaccgcaatc ggatcaccgc
     2401 cttgcggatc acgccgttgg tgcgcaaacc ggtggcgaag ctggcttagg caaatctctt
     2461 tggagttgac ccgccggcgg cctcttcatg cgccggcttc gcccggcgcc gcggcgtgaa
     2521 tagcgagcgc atgcacgccg ccttttagct cagcgacaag cgtttcattg accatgcggt
     2581 ggcgctcgag gcggctcttc ccgcggaacg cctccgccac aatatatacc ctgaaatgag
     2641 tttccccgcc ctctcgatgc ccggcatgcc cggcgtgctg gtgggattcg tcgattacct
     2701 tcaggttcgc cggggcgaaa gccttcgtca acttctcggc gatgatatcg cgtgttgcca
     2761 tgcttctcgg catagcggga gccggaccgt ccggtcaatc ggcgagaacg tgcaaacgcc
     2821 catgtgtcaa gacttgaaga tggcttcgcg acgcgcgcat actgatcggt catgaaaagc
     2881 gactcgccct tattcgatcg cattcgggtc aagcccgaca aagatcgtcg ccagcgcgcg
     2941 gaatgcccgg cgtgcgagtg gccgaattgc caggcgccgg cgacccaccg cgctcccaaa
     3001 gggcggttgc gcgagcgtga atactggcgc ttttgcctcg aacacgtccg cgagtacaac
     3061 cacgcctaca atttcttcgc cggcatgagc accgaggaca tcgcccgctt tcagaaagaa
     3121 gccgtgatcg gccatcgtcc gacctggaaa atggggatgc acggcggccg gccagccgcc
     3181 cgttcccatt cttctcgccg tccttccgaa tttaccggcg cggatgaccc attcggggtg
     3241 ttccgggagt tcggcggagc gggcagcgcg tggcgaggca cgcagcggca cgtggcggaa
     3301 tcccgtaccg tgcgcaatgc cgagcgcaag gcgctcgatg cgctcggcct cgaggcggat
     3361 gcctcggtgc aagacgtcaa gcggcagttc aaggcgttgg tgaagcggca tcatcccgat
     3421 gccaatggcg gcgatcgctc ttccgaagat cggctgcgcg agatcatcca ggcctatacg
     3481 tacctcaagt ccatcggctt ccgctgagcc gagaggctgc gcgccgcgcg tcggccttgc
     3541 agctcgtgcg gggccatggg cgaacggaag ctgcgcggat gaattgccgc gtggaatgtc
     3601 gtgcccactc aatctccggg tgcggcaacc ggggcagtcg ctgctcgaac cagaggcgca
     3661 cgcggcgcgt tgttatttac tggcgcgacg cattgacctt ggaacggtcg atacttactt
     3721 gaaatcatgc gattttcagc tcacaaccct gtgcctttcg cggcctggcg gctttctgct
     3781 aagttggcgg acgaatccgc cccgcattcc gtcgaccgaa aacgggtctc ggtcgcttcc
     3841 gagatcacgg aggagcaatg accgccgcaa cgcaagagat cgccaacctt cccgacatga
     3901 aggtatcgat ccgtcagctc ttcgggttcg acagtgacat ggaagtgccg gcctattcgg
     3961 aagccgatgc gcatgtcccc gacgtggatc ccgactatcg gttcgacaag ccgacgacgc
     4021 tcgccatcct cgccggtttc gcgcacaatc gtcgggttat cgtcaccggc tatcacggca
     4081 cgggcaaatc gacccacatc gagcaggtgg cggcccgcct caactggcca tgcgtgcggg
     4141 tgaacctcga cagccacatc agccgcatcg atctgatcgg caaggatgcc atcgtcatcc
     4201 gcgacggcat gcaggtgacc gagtttcgcg acggtatttt gccctgggcc taccagcaca
     4261 acgtggcgct ctgtttcgac gaatatgatg cgggccgtcc cgacgtgatg ttcgtgatcc
     4321 agcgcgtgct ggagtcctcg ggccgactca ccttgctcga tcagagtcgc gtcgtcaggc
     4381 cgcatccggc cttccgcctg ttcgcgaccg cgaacacggt cggccttggc gatacctccg
     4441 gcctctatca cggcacgcaa cagatcaatc aggcgcagat ggatcgctgg tcgatcgtga
     4501 ccacgctcaa ttatctgccg cacgacaacg aagtcgacat cgtgctcgcc aaagccaagc
     4561 actatcgcac cgatcagggc cgcgacgtgg tcaacaagat ggtgcgggtc gccgacctca
     4621 cgcgaaacgc cttcatgaac ggcgacattt ccaccgtgat gagcccgcgc accgtgatca
     4681 cctgggcgga gaacgccgac atcttcaaag acatcggctt cgccttcagg ctgacctttc
     4741 tcaacaagtg cgacgagctg gagcggccga tcgtagccga gttctatcag cgatgtttcg
     4801 gagtggagct gccggaatcg tcggtcaatg tggcgctgac ttgagcgatc cgcccatgcc
     4861 catgacgctg tgatggcatc gaacatcagg ccgcggaatc cctcgaaaga atccccgacc
     4921 gagccgttca agcgcgcggt caccggatgc ctgcgcgcca tcgcccgcaa gcccgaactc
     4981 gaagtcgcgt ttgcggccga gcgccc
//
LOCUS       DATCWM010000047         8459 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_335113, whole genome shotgun sequence.
ACCESSION   DATCWM010000047 DATCWM010000000
VERSION     DATCWM010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8459
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_335113"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(482..1375)
                     /locus_tag="VIQ50_00870"
     CDS             complement(482..1375)
                     /locus_tag="VIQ50_00870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEY9358955.1"
                     /translation="MDWDKLKVFHAAAEAGSFTHAGEQLGLSQSAVSRQVSALEQELG
                     VSLFHRHARGLILTEQGELLHHTAHDVFMKLEAARAKLTDSRERPNGELRVQTTPGIG
                     VHWLTPRLGEFIELYPDVHVTLITTDEELDLAMREADVAIRLRLPTQPDLIQRKLFSV
                     RFHAYASPEYVKRFGTPRALDDLDNHRILLLGGSTVPNYLENRRWLIEVGRNGKGART
                     PVLTINSVLGVLRACQRGIGVALLPDYLVEENGGLVQLFGESDTIALDAYFVYPEELK
                     TVARVQVFRDFLVAKAQRWHF"
     gene            complement(1402..2373)
                     /gene="trxB"
                     /locus_tag="VIQ50_00875"
     CDS             complement(1402..2373)
                     /gene="trxB"
                     /locus_tag="VIQ50_00875"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020084148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HEY9358956.1"
                     /translation="MGQMNRAKLVIIGSGAAGYTAGIYAARAMLDPVLIQGIQPGGQL
                     TITTDVENYPGFVNVIQGPWLMEQMQKQAEHVGTRLIADHVNKVDLRRRPFRIECDSG
                     DGYLADSLIVATGAQARWLELPSEQKFKGYGVSACATCDGFFYRGKEVLVIGGGNTAV
                     EEALFLTNFAATVTVVHRRDSFRAEKILQDRLFKNPKISVIWDTVLEEVVGEESPLKV
                     KGVILRNVKTGAFTERTADGVFVAIGHTPASELFVGQLDMKPSGYIKTAPFSTATSVA
                     GVFAAGDVTDDVYRQAVTAAGQGCMAALEAERFLALQGEAEPAVAAE"
     gene            2714..3190
                     /locus_tag="VIQ50_00880"
     CDS             2714..3190
                     /locus_tag="VIQ50_00880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008135853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HEY9358957.1"
                     /translation="MPARLDAIDRQILEELQEDGRITNVELARRVGISAPPCLRRVRA
                     LEQAGYIKGYRALLDEKRLGYEVTIFAMVHLTSQAEADLKAFEDFVRAQPLVRECWML
                     SGEIDFILKCVAPDLKTFQAFVAELTAAPHVRNVKTSLTLRNSKDAAMVPLNLKAR"
     gene            complement(3221..4249)
                     /locus_tag="VIQ50_00885"
     CDS             complement(3221..4249)
                     /locus_tag="VIQ50_00885"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEY9358958.1"
                     /translation="MKFGVFDHMDDAGGPLAKLYADRLELIEAYDRSGIYGYHLAEHH
                     STPLGCAASPGLFLAALAQRTKSLRFGPLVYLLPFYHPLRLIEEICMLDQMSGGRLEL
                     GIGRGVSPFETRAYGLDFAQTGEIYHEAFQLILNGLTSDELTFEGKHYQFHKVPMILR
                     PLQRPHPPLWYGITIPENADWPAANDVNIVTIALRPMVRLILDRYRAERTRLGKRHHP
                     FMGVARHVVVADSDEAALAIARRAYPRWRGNFRWLFARHGAEPRIATLYPPTFDELAA
                     IDNAVAGSSRTVRDFIAAEIEATGSNYFVAWLAFGDMSLEESLRSLELFAREVMPAFA
                     RVPADAAQ"
     gene            complement(4319..4792)
                     /gene="greA"
                     /locus_tag="VIQ50_00890"
     CDS             complement(4319..4792)
                     /gene="greA"
                     /locus_tag="VIQ50_00890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HEY9358959.1"
                     /translation="MDKIPMTADGYAALQNELKHRQQIERPRIIQQITDARTHGDLSE
                     NAEYHAAKETQSHNETRIAELEDKLARAEVIDVSKLSGDTITFGATVTLVDEDTEKKQ
                     VWQLVGEPEADAKKGKISITSPLARALIGKGKGTSVEVMTPSGAKAYEIKKVEWR"
     gene            complement(4898..8221)
                     /gene="carB"
                     /locus_tag="VIQ50_00895"
     CDS             complement(4898..8221)
                     /gene="carB"
                     /locus_tag="VIQ50_00895"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEY9358960.1"
                     /translation="MPKRTDISSILIIGAGPIVIGQACEFDYSGTQAVKALKAEGYRV
                     VLVNSNPATIMTDPDLADATYIEPITPEIVAKIIEKERHVAAGGFGLLPTMGGQTALN
                     TALSLNKMGVLARFDVTMIGATAQAIDKAEDRELFREAMHRIGLETPRSKQVKTLINA
                     LAALEEIGLPAIIRPSFTLGGTGGGIAYTKTEFIDIVERGIDASPTNEVLIEESVLGW
                     KEFEMEVVRDKRDNCIIVCSIENLDPMGVHTGDSITIAPALTLTDKEYQIMRDASIAV
                     LREIGVETGGSNVQFAVNPADGRLVIIEMNPRVSRSSALASKATGFPIAKVAAKLAVG
                     YTLDEIANDITGGATPASFEPTIDYVVTKIPRFAFEKFPGAEPILTTSMKSVGEAMAI
                     GRTFQESLQKALRSLENGFTGLDEIAIEGLGQGDDKNAVRAALGTPTPERILKVGQAM
                     RLGFSDQDIHASCKIDPWFLAEIRGLIEAEAEIRAKGLPASAGALRRLKAMGFSDARL
                     AKLTGIAPAAVTRRRRALGVRPVFKRIDSCAAEFASPTAYMYSTYAAPFAGAPVCEAA
                     PSDKNKIVILGGGPNRIGQGIEFDYCCCHAAFALKEAGYETIMVNCNPETVSTDYDTS
                     DRLYFEPLTAEDVLEIIETEHSGGQLRGVIVQFGGQTPLKLAEALEQAKIPILGTSPD
                     MIDLAEDRDRFKQLLQKLNLRQPTSGVATSPKHARAIAEEVGYPIVIRPSYVLGGRAM
                     EIVADAAQLERYIMRLASDLDRPSELVVSAKRPLLIDRYLSDAIEVDVDCLADGKDTT
                     IVGIMEHIEEAGIHSGDSACALPPHSLNKTAIAELERQTRALALALKVGGLMNVQYAI
                     KNGDIYVLEVNPRASRTVPFVAKVIGVPVAKIAARIMAGEMLASFDLKPAAFDHIGVK
                     EAVFPFARFPGVDTVLGPEMKSTGEVMGIDRNFAIAFAKSQIGGGSRLPRAGTVFVSV
                     RDADKPRVLEAVRLLVSLGFRIIATSGTQRYLAEQGLPAGRINKVLEGRPHIVDAIAN
                     GEVQLVFNTTEGATALADSRSLRRAALLHKVPYYTTLSGAVAAAQGIKAYLAGDLEVR
                     ALQSYFGGKAASGKPGPVA"
BASE COUNT         1455 a         2692 c         2781 g         1531 t
ORIGIN      
        1 tccccccgcc gccgaaccca ggacgcgggc ggtcaatcgc cccattcagg atcgacgcaa
       61 gtgggcggat cagaactcgg ccggcaaata cccgttgatc tccaggccga tgcagatctc
      121 aacgagggtc ggggttgtcc aggccattgg tcgccttccc tagatgtccg aattacaaca
      181 aactagggcg gggcggaccg gtgcgcaagg acctgagcag cggagaccaa tgaaaaaccg
      241 gacccttgcg ggtccggttg tagtttgtcg gcgcgggggc cgacaatcac cttccagagg
      301 ggaacagctg acggcgctac gattgcaatc tgggaggatg gacaatcgcc ggccgccagt
      361 cactgcagta tgcagccgcg attttcccac acaacgcaaa gggttgcatg ccagccatgc
      421 ggcaactggt aggcagacgc attcaccggt ctgagccgcc gcgagcgtgc ggacatctgc
      481 gctagaagtg ccagcgctgt gcttttgcga cgagaaagtc gcggaacacc tgcacccgcg
      541 ccaccgtctt gagctcttcc gggtagacga aataggcgtc gagggcgatg gtgtcggact
      601 cgccgaacaa ttgcaccagc ccgccattct cctcgaccaa gtaatccggc agcaaagcaa
      661 cgccgattcc tcgctggcat gcgcgcagca caccgagcac gctgttgatt gtcagcaccg
      721 gcgtgcgcgc acccttgcca ttgcgcccaa cctcgatcag ccagcgccgg ttctcgagat
      781 agttaggcac cgtgctgccg cccaacagca ggatgcgatg gttgtccagg tcatcgagcg
      841 cgcgcggcgt gccgaaccgc ttgacgtatt ccggcgaggc gtaagcgtgg aagcgtaccg
      901 agaacagctt gcgctggatc aaatcgggct gcgtcggcag gcgcaggcga atcgccacgt
      961 ccgcctcccg catcgccagg tcgagttcct cgtccgtggt gatcagcgtg acatgcacgt
     1021 cgggataaag ctcgatgaac tcgcccaagc gcggggtgag ccaatggacg ccaatgccag
     1081 gggtcgtctg cacccgcagc tccccgttcg gccgctcgcg gctgtcggtc agctttgcgc
     1141 gcgcggcttc aagcttcatg aagacgtcgt gcgcggtgtg atgcagcaac tcgccctgct
     1201 cggtcagaat gagcccgcgc gcatggcggt ggaacagcga cacgccgagc tcctgttcca
     1261 gtgccgaaac ctgccgcgac accgcggatt gggacagccc caactgctcg ccggcatggg
     1321 tgaagctgcc ggcctcggcg gcggcgtgga agaccttcag cttgtcccaa tccatgctca
     1381 ttggcgcacc tggcaaggcc gtcactcggc cgcgacggcc ggctccgcct cgccctgtag
     1441 agcgaggaag cgttcggcct cgagcgcggc catgcagccc tgcccagcgg cggtaaccgc
     1501 ctggcgatag acgtcatcgg tgacgtcgcc agcggcaaac acgccggcca cggaggttgc
     1561 ggtcgagaac ggcgcggtct tgatgtagcc cgagggcttc atgtccaact gcccgacgaa
     1621 cagctcggag gcgggcgtgt ggccaatcgc gacgaatacc ccgtccgcgg tccgctcggt
     1681 gaacgcgccc gttttgacgt tgcgcaggat cacgcctttc actttgagcg ggctctcttc
     1741 gcccacgacc tcctcgagga cggtgtccca aatcaccgaa atcttcggat tcttgaacag
     1801 acgatcctgc agaatcttct ccgcgcggaa gctatcgcgt cggtgaacga cggtaacggt
     1861 agcggcgaaa ttggtcagga agagcgcttc ctcgaccgcg gtattgccgc cgccgatcac
     1921 cagcacctcc ttgccgcggt aaaagaagcc gtcgcaggtg gcgcaggcgg aaacgccata
     1981 gcccttgaat ttctgctccg agggcaactc gagccagcgc gcctgagcgc cggtcgcgac
     2041 gatcaggcta tcggcgagat agccgtcgcc ggaatcgcat tcgatccgga atggccgccg
     2101 ccgaagatcg accttgttca cgtggtcggc gatgagtctg gtcccgacgt gctcggcctg
     2161 cttttgcatc tgctccatga gccagggacc ctggatgacg ttgacgaagc cggggtagtt
     2221 ctccacatcg gtggtgatgg tgagctggcc ccccggctgg atgccttgaa tcagcaccgg
     2281 gtccagcatg gcccgggcgg catagattcc ggcggtatag cctgcagccc ccgaaccgat
     2341 aatgacgagc ttggcgcggt tcatctggcc catccacgaa gacccctggt gcgctggaag
     2401 ccaagggcgt gcggcaaatc gcgccggcgg cgtcgttttg cggtacgcgc tcgaactttg
     2461 acggcgcccc cgatcgggcc tcccaccgtt accgttcggt cccccggccg agcgcgcgcg
     2521 gggatcgatc ggaacgcgca ttgatgctct gcacaattta tgacttcgcg gcagccatgc
     2581 aagatatgca gaccaggaac cacaaccttg tgaaagccga tggtggcgca ataccgctga
     2641 gcaataatgt ttcgcgcccg cggcgcgctg ttgctaacaa ttgggccagc caaggtcagt
     2701 tcgggagttt tccgtgcccg cccgtctcga cgccattgac cggcagatcc ttgaggagct
     2761 gcaggaggat ggccgaatca ccaatgtcga gctcgcccgc cgcgtcggca tctcggcgcc
     2821 gccctgcctg cggcgggtgc gcgcgctcga gcaggccggc tacatcaagg gctatcgcgc
     2881 tctgctcgac gagaaacgtc tcggttacga ggtgaccatc ttcgcgatgg tgcacctgac
     2941 gagccaggcc gaggccgatc tcaaggcttt cgaggatttc gtgcgcgccc aaccgctggt
     3001 gcgcgaatgc tggatgctct ccggcgagat cgacttcatc ctcaaatgcg tggcaccgga
     3061 tctcaagacc ttccaggctt ttgttgccga gctcacggcg gcgccgcacg tgcgcaacgt
     3121 caagacctcg ctgacgctgc gcaattccaa ggacgccgcc atggtgccgt tgaatctaaa
     3181 ggcgcgctaa gccgggcggt aaagccacat ctgtgccaac tcattgtgcc gcgtcggcgg
     3241 gcacgcgggc gaaggccggc atcacctcgc gcgcgaacag ctcgagcgaa cgcagcgact
     3301 cctcgaggct catgtcgccg aacgccagcc aggcgacgaa atagttgctg ccggtcgcct
     3361 cgatctccgc ggcgatgaaa tcgcggactg tgcgcgaaga tcccgcaacc gcgttgtcga
     3421 tcgccgcgag ctcgtcgaac gtgggcgggt aaagcgtcgc gatccgcggc tcggcgccat
     3481 gccgcgcgaa caaccagcgg aagttgccgc gccagcgcgg ataggcgcgc cgtgcgattg
     3541 caagcgcggc ctcatcgctg tccgccacca ccacatggcg cgcgaccccc atgaacggat
     3601 gatgccgctt gccgaggcgg gtgcgttcgg cgcggtagcg atcgaggatc aagcgcacca
     3661 tcggccgtag cgcgatcgtc acgatgttga catcgtttgc cgccggccaa tcggcgtttt
     3721 cggggatcgt gattccgtac cacagcggcg gatgcgggcg ctgcagcggc cgcaggatca
     3781 tcggcacctt gtgaaactgg tagtgcttgc cttcgaacgt cagctcgtca gaggtgaggc
     3841 cattgagaat gagctggaat gcttcgtgat agatctctcc ggtctgcgcg aagtcgagcc
     3901 catatgcgcg ggtctcgaac ggcgacacgc cccgcccgat tccgagttcg agcctcccgc
     3961 cgctcatctg atcgagcatg cagatttcct cgatcaagcg cagcggatga tagaacggca
     4021 ggagatagac gagtgggccg aagcgcaagc tcttggtgcg ctgcgccagc gcggcgagga
     4081 atagtcccgg cgaggcggcg cagccgagcg gcgtcgagtg atgttcggcg aggtgatagc
     4141 catagatacc gctgcgatcg taggcttcga tcagctcaag tcgatcggca tagagcttcg
     4201 cgagcggacc gcccgcgtcg tccatgtgat cgaatacgcc gaacttcatg ggaatgcgcc
     4261 gcgggaccgc gctcgcccgc ccggcttagc ccctctcgcg gcctccagga ccgcttcgct
     4321 atcgccactc gacctttttg atttcgtagg ccttggcccc gcttggcgtc atcacctcga
     4381 cgcttgtgcc cttgcccttg ccgatgagcg cgcgggcgag tggcgaggtg atcgagatct
     4441 tgcctttctt ggcgtcggcc tcgggctcgc cgacgagctg ccacacctgt ttcttctcgg
     4501 tgtcctcgtc gacaagcgtt accgtcgcgc cgaatgtgat ggtatcgccc gagagcttag
     4561 agacgtcgat gacctccgca cgcgcgagct tgtcctcgag ttcggcgatg cgcgtctcgt
     4621 tgtgcgactg cgtctccttg gcggcgtggt attcggcatt ctccgacaag tcgccgtggg
     4681 ttcgcgcgtc ggtaatctgc tggatgatac gcggccgctc gatctgctgg cggtgcttga
     4741 gctcattctg gagcgccgca tagccgtctg ccgtcatcgg gatcttgtcc atctgttcct
     4801 tcgagcctcc gacttcagcc gagagacaat aattccgatc gcgggccgaa gcatcatccg
     4861 gccacgcgac cctgaaccct gtcccaatca cgtaccgtca ggcgaccggc cccggtttcc
     4921 cggatgcggc cttgccgccg aaatagctct gcagcgcgcg cacctcgagg tcacccgcga
     4981 gataagcttt gattccctgc gctgcggcga cggccccaga aagagtggtg tagtacggca
     5041 ctttatgcaa gagggcggcg cgccgcagcg agcggctgtc cgccagggcg gttgctccct
     5101 cggtggtgtt gaaaaccagc tgaacctcgc cgtttgcgat ggcatcgacg atatggggcc
     5161 ggccttccag gaccttattg atccgtccgg ccggcagccc ctgctcggcg aggtaacgct
     5221 gggtgcccga ggtggcgatg atgcggaacc ccagcgagac cagaaggcga acggcctcca
     5281 ggacccgcgg tttgtcggcg tcccgcaccg agacgaagac ggtgccggcg cgcggcagcc
     5341 gagagccccc gccgatctgg ctcttggcga aagcgatggc gaagttgcgg tcaatgccca
     5401 tcacctcccc ggttgatttc atctccggcc caagcacggt atcgaccccg gggaagcggg
     5461 cgaagggaaa gaccgcttct ttcaccccga tgtggtcgaa tgcggcgggt ttgaggtcga
     5521 agctcgccag catttccccg gccatgatcc gggcggcgat cttggccacc ggaacgccga
     5581 tcaccttggc aacgaagggt accgtgcgcg aggcccgcgg attgacctcg agcacgtaaa
     5641 tgtcgccgtt cttgatggcg tattgcacgt tcatcaggcc gccgaccttg agcgcgagcg
     5701 cgagcgcccg cgtctgccgc tcgagttcgg cgatagcggt cttgttgagc gagtgcggcg
     5761 gcagcgcgca ggcgctgtcg cccgaatgga tgcccgcctc ctcgatgtgc tccatgatgc
     5821 cgacgatggt cgtgtccttg ccgtcggcga ggcagtcgac gtcgacttcg atggcgtcgg
     5881 acagatatcg atcgatcagc agcggtcgct tcgccgagac cacgagctcg gaggggcggt
     5941 cgagatcgct ggcgagccgc atgatgtagc gctcgagttg cgcggcgtcg gcgacgatct
     6001 ccatggcgcg cccgccgagc acgtaagagg gccggatcac gatgggatag ccgacctcct
     6061 cggcgatcgc gcgcgcgtgc ttggggctgg tggcgacgcc gctggtgggc tggcgcaggt
     6121 tgagcttttg gagcagctgt ttgaagcgat cgcggtcctc ggccaggtcg atcatgtcgg
     6181 gagaggtccc gaggatcgga attttggcct gttccagcgc ctctgcgagc ttgaggggcg
     6241 tctggccgcc gaactgcacg atcacgccgc gcaactgccc gccggagtgc tctgtctcga
     6301 tgatctcgag cacgtcctcg gcggtcagcg gttcgaagta gagccggtcg gaggtgtcgt
     6361 agtcggtcga gacggtctcc gggttgcaat tgaccatgat ggtttcgtag cccgcctcct
     6421 tgagcgcgaa ggcggcgtgg cagcagcaat agtcgaactc gatgccttgc ccgatgcgat
     6481 ttggcccgcc gcctaggatg acaatcttgt ttttgtccga gggggcggcc tcgcacaccg
     6541 gcgctccggc gaacggcgcg gcataggtcg agtacatgta ggccgtcggc gaggcgaact
     6601 ccgcggcgca actgtcgatt cgcttgaaga ccggacgcac cccgagcgcg cggcgccgcc
     6661 gggtgaccgc cgcgggcgcg atcccagtga gtttggcgag ccgcgcatcg gaaaagccca
     6721 tggccttgag gcggcgcagc gcgcctgcgc tcgccggcag acccttggcg cggatctcgg
     6781 cctcggcttc gatcaggccg cggatctcgg ccaggaacca gggatcgatc ttgcaggagg
     6841 cgtggatgtc ctggtcggaa aaaccgagcc gcatcgcctg cccgaccttg aggatgcgct
     6901 cgggcgtggg cgtgccgagt gcggcgcgca ccgcgttctt gtcgtcgccc tggccgaggc
     6961 cctcgattgc gatctcatcg agcccggtaa agccgttttc gagcgagcgc agcgccttct
     7021 gcaggctctc ctgaaacgtg cggccgatcg ccattgcctc gccgaccgat ttcatcgaag
     7081 tggtcaggat cggctcggcg ccggggaact tctcgaacgc gaagcgcggg atcttggtga
     7141 ccacgtaatc gatggtcggc tcgaacgagg ccggcgtcgc gccgccggtg atgtcgttgg
     7201 cgatctcgtc gagcgtgtag ccgaccgcga gcttggccgc gaccttggcg atggggaagc
     7261 cggtcgcctt cgaggccagc gcggaggagc gcgacacgcg cggattcatc tcgatgatca
     7321 ccagccgccc atccgcggga ttgaccgcga actgcacgtt ggagcccccg gtctccacgc
     7381 cgatctcgcg caacaccgca atcgaggcgt cgcgcatgat ctggtattcc ttgtcggtaa
     7441 gcgtgagcgc gggcgcgatg gtgatcgaat ctccggtatg cacgcccatc ggatcgagat
     7501 tctcgatcga gcagacgatg atgcaattgt cgcgcttgtc gcgcaccacc tccatctcga
     7561 actccttcca ccccagcacc gattcctcga tcagcacctc gttggtgggc gacgcgtcga
     7621 tgccgcgctc gacgatgtcg atgaattcgg tcttggtata ggcgatgccg ccgccggtgc
     7681 cgcccaaggt gaaggagggg cggatgatgg cgggaaggcc gatctcctcg agcgccgcga
     7741 gcgcattgat cagcgtcttg acctgcttgg agcgcggggt ctcgagcccg atgcggtgca
     7801 tcgcctcgcg gaacagctcg cgatcctcgg ccttgtcgat cgcttgcgcg gtagctccga
     7861 tcatggtcac atcgaagcgc gccagcaccc ccatcttgtt gagcgagagg gccgtgttga
     7921 gcgcggtctg cccgcccatg gtgggcaaga gaccgaatcc gccggcagcg acgtggcgct
     7981 ccttctcgat gatcttggcg acgatctcgg gcgtgatcgg ctcgatatag gtggcatcgg
     8041 cgagatcggg atcggtcatg atcgtcgccg gattggagtt caccaacacg acgcggtagc
     8101 cttcggcctt gagcgccttg accgcctgcg tcccggaata gtcgaactcg caagcctggc
     8161 cgatgacgat cggccccgcg ccgatgatga ggatcgagga gatgtcggtc cgcttgggca
     8221 tgtcgctcgg cgttgtctga gccgcaggca caaaaaaagg gcgcgcgttc tgcgcgtcct
     8281 tcgggcggcg cagaggctgc gtccccgcgc gcgggccggt gtttagacca gaacgggcgg
     8341 ggagggaagg gcgacgccag ttcgcttaac agcttccgac aggcggcgtc acttcacacc
     8401 ggccgcgcga tgaaggtcat gcgccaggga ttgtggccga tattggcgct gtcgcggcg
//
LOCUS       DATCWM010000048         2528 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_70603, whole genome shotgun sequence.
ACCESSION   DATCWM010000048 DATCWM010000000
VERSION     DATCWM010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2528
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70603"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(175..1563)
                     /gene="argH"
                     /locus_tag="VIQ50_00900"
     CDS             complement(175..1563)
                     /gene="argH"
                     /locus_tag="VIQ50_00900"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HEY9358961.1"
                     /translation="MSNKMWGGRFRTSPDAVMEDINTSIDFDRHLFRQDIAASRAHAA
                     MLAKQGIITADDARKIAHGLDTILSEIESGRFKFKRTLEDIHMNVESRLTELIGPAAG
                     RLHTARSRNDQVATDFRLWIRETIDSVDAALARYQRALAEKALEHAATVMPGFTHLQV
                     AQPVTFGHHLLAYVEMAARDRGRFADARKRANFCPLGAAALAGTAFPVDRAMTAKALG
                     FTAPMTNSLDAVSDRDFVLETLAAAAITAVHLSRFAEEIVIWCSPLVGFISLSDRFTT
                     GSSIMPQKRNPDAAELVRAKTGRIVGALEALLIVLKGLPLAYQKDMQEDKEGAMDAFS
                     ALSRSIAAMTGMVDDMTVDVARMHQAAGIGYSTATDLADWLVRELEMPFREAHHVTAR
                     IVAKAAAQNVPLHQLPLAAMQAIEKRISNEVYAVLTVENSVRSRTSYGGTAPKNVRRE
                     ANRWLKTLAKGK"
     gene            1642..2253
                     /locus_tag="VIQ50_00905"
     CDS             1642..2253
                     /locus_tag="VIQ50_00905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009337515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEY9358962.1"
                     /translation="MAVVGGIAGVAVALAAVYGIGALKRNAADTACAGAAHLAERLAP
                     LARGEVAAFTVADGSQRLPDLAFRDASGTERNLADWRGRTVLLNLWATWCVPCRKEMP
                     ALDALEGKLGGPAFEVVAVNIDTRNADKPRVWLNEVGVGRLGYYADPSAKIFQDLKTM
                     GRAAGMPTTLLVDPAGCEIGTIFGPAEWASEDAVKLVTAALQR"
     gene            complement(2299..>2528)
                     /locus_tag="VIQ50_00910"
     CDS             complement(2299..>2528)
                     /locus_tag="VIQ50_00910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /protein_id="HEY9358963.1"
                     /translation="AMRLGAHHPMGPLELADFIGLDTCLSVMQVLHEGLADSKYRPCP
                     LLVKYVEAGWLGRKTQRGFYDYRGEKPVPTR"
BASE COUNT          451 a          805 c          833 g          439 t
ORIGIN      
        1 cagccggcaa gtccgagcgc ggcgatgagc gcaccgatcg ctgcaatccg ggcaaggcgt
       61 agctcgcagg aacgcatcag ttcaggaact ccccaatcga ggccagcata acagatcgga
      121 tgcgggaggc gagaacatgg ccaaacccgg ccgcctgtga ggaacgggag cttatcattt
      181 cccttttgcc aaggtcttaa gccacctgtt cgcctcccgg cgcacgttct tcggggcggt
      241 ccctccatag ctcgtgcggc ttctcactga attctccacc gtgagcaccg cgtagacctc
      301 gttgctgatg cgcttctcga tcgcctgcat ggcagcgagc ggcaattgat gcagcggaac
      361 gttctgcgcc gccgccttgg ccacaatccg cgcggtcacg tggtgcgcct cgcggaacgg
      421 catttcaagc tcgcggacga gccagtcggc gaggtccgtt gcagtggaat agcctatgcc
      481 ggcggcttga tgcatgcgcg caacgtcgac cgtcatgtcg tccaccatgc cggtcatcgc
      541 ggcaatcgac ctgctgaggg cagaaaaggc gtccatggcg ccttccttgt cctcctgcat
      601 gtccttctga taggcgagtg gcaagccctt gagcacgatc aatagcgcct cgagcgcgcc
      661 gacgatgcgt ccggtcttgg cccgcacaag ctcggcggcg tcggggttgc gcttctgcgg
      721 cataatggac gagccggtag taaaacggtc ggagagcgag atgaagccga cgagcggcga
      781 gcaccagatc acgatttcct cggcaaaacg cgacagatgc accgcggtga tcgccgcggc
      841 ggcaagcgtc tccaggacga aatcgcggtc agagacagca tcgagcgaat tcgtcatcgg
      901 cgcggtgaag ccgagcgcct tcgcggtcat cgcgcggtcg accgggaaag cggtgccggc
      961 gagcgccgcg gcacccagcg gacaaaaatt cgcccgcttg cgcgcatccg caaaccggcc
     1021 gcggtcgcgc gccgccatct cgacataggc gagcaggtgg tggccgaagg tcacgggctg
     1081 cgccacctgt aggtgggtga agcccggcat cacggtggcg gcgtgctcga gcgccttctc
     1141 cgcgagcgca cgctgatatc tggcgagcgc cgcatccacg gaatcgatcg tctccctgat
     1201 ccacagccgg aaatcggttg ccacctgatc gttgcgcgat ctcgcagtat ggagccgccc
     1261 cgccgccggc ccaatcaatt ccgtgagccg gctttccacg ttcatgtgga tgtcctcgag
     1321 cgtccgcttg aacttgaacc ggccgctctc gatctctgac aggatcgtgt ctagaccgtg
     1381 agcgatcttg cgggcatcgt cggccgtgat gatgccttgt ttggcaagca tcgccgcatg
     1441 ggctcggctc gcggcgatat cttggcggaa gaggtgccgg tcaaaatcaa tggaggtgtt
     1501 gatatcctcc atgactgcgt cggggctggt gcggaaacgc ccgccccaca tcttgttgct
     1561 catggcacgt ctaccgaggt ttcgcccctc atgaccgcac ccgagattgc agcgcgatcc
     1621 cacgccagga ggcggcttgc catggccgtg gttggcggta ttgccggcgt cgccgtcgcc
     1681 ttggcggcgg tatacgggat cggagcattg aagcgcaatg cggcagacac cgcatgcgct
     1741 ggcgcagcgc acctggcaga acgcctggcg ccgctcgcgc gcggcgaagt ggctgccttc
     1801 accgtcgccg atggatcgca gcgcctgccc gatcttgcat tccgcgatgc gagcgggacg
     1861 gagcgcaacc tcgccgactg gcgtggacgc acggtgctgc tcaacctatg ggcgacctgg
     1921 tgcgtgccct gccgcaaaga gatgccggcg ctcgacgcgc tggagggcaa actcggcgga
     1981 cccgctttcg aggtggtggc ggtcaacatc gacactcgca atgccgataa gccacgcgtc
     2041 tggctcaatg aggttggcgt cggccgactg ggctattacg ccgatccgag cgccaagatt
     2101 tttcaggacc tgaagacgat gggccgcgcc gccggaatgc cgacgacgct gctggtggat
     2161 ccagccggct gcgagatcgg cacgattttc gggccggcgg aatgggcgag cgaggatgcg
     2221 gtcaagctcg tgaccgcggc gctgcagcgc tagcggcctc tcgcaagctt ccggactgat
     2281 cgacgaagtg gccgacggtc agcgcgtcgg cactggcttc tcgccgcgat agtcgtagaa
     2341 gccgcgctgg gtcttgcggc cgagccaacc ggcttcgacg tacttcacca acagcggaca
     2401 cgggcgatac ttagaatcgg ccaagccttc gtgcaggacc tgcatgaccg agagacaggt
     2461 gtcgagcccg atgaagtccg cgagctcgag cggccccatc ggatgatggg cgccgagccg
     2521 catcgcgg
//
LOCUS       DATCWM010000049         2421 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_167721, whole genome shotgun sequence.
ACCESSION   DATCWM010000049 DATCWM010000000
VERSION     DATCWM010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2421)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2421
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167721"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..448)
                     /locus_tag="VIQ50_00915"
     CDS             complement(<1..448)
                     /locus_tag="VIQ50_00915"
                     /inference="COORDINATES: protein motif:HMM:NF015000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /protein_id="HEY9358964.1"
                     /translation="MAQLQRYDVGRLKPGTAYAAAFPEQRGMDGVRIPTLTSVFDLVR
                     QVKADHVRFNIETKLTPTSGADTPDPEMFAAAVLQAVREAGLAARVGIQSFDWRTLMI
                     LRRIAPQIERVCLTMDGGGGDTLQRGEGGASPWTAGLDIDDFGGSTP"
     gene            complement(451..795)
                     /locus_tag="VIQ50_00920"
     CDS             complement(451..795)
                     /locus_tag="VIQ50_00920"
                     /inference="COORDINATES: protein motif:HMM:NF015000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /protein_id="HEY9358965.1"
                     /translation="MPLRVGAIYLLTIAAIAALVPVWAKFAKAANEFRPPDKIAFDLQ
                     GHRGARGLAPENTLPAFATALSIGVSTLELDLAMTSDGVLVVSHDRRLNPDHTRGPDG
                     TFLDGEGPAILR"
     gene            complement(860..1885)
                     /locus_tag="VIQ50_00925"
     CDS             complement(860..1885)
                     /locus_tag="VIQ50_00925"
                     /inference="COORDINATES: protein motif:HMM:NF039236.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEY9358966.1"
                     /translation="MTTPSFPLQQWYVAAFGSEVGRTPLARTVCNEPLVMFRRRDNSV
                     AVLDDRCPHRLYQLSRGQLVDDDIECGYHGLRFDGMGACTHIPAQKQIPAGFGVRSFP
                     AAERSGLVYVWMGEPVRADRSLIPDFPENGGAAWAASGALRHVEANYQLVVDNLLDLT
                     HLTFVHKTTLAGPGIQENPLDVRVDGERVIARREMRGVDPAPIFRTLRHFPDKIDRYQ
                     NITFIPPSHVHIRIEATPAGANDDPDLVHHVVLNHLTPETERTTHYFWSICRRMRIDD
                     AAIGQRLFEMNRAAFDEDAEVLKHQQAMIDRDSARAALANLDADKATVAARRIVRRKI
                     EAEKAKT"
     gene            2217..>2421
                     /locus_tag="VIQ50_00930"
     CDS             2217..>2421
                     /locus_tag="VIQ50_00930"
                     /inference="COORDINATES: protein motif:HMM:NF039194.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5681 domain-containing protein"
                     /protein_id="HEY9358967.1"
                     /translation="MRFQKGESGNPTGRPRGVLNHATLLAQELLAARVESIAGKLIEL
                     AEGGDMRAIRVCMDRLVPAIKDQP"
BASE COUNT          453 a          746 c          787 g          435 t
ORIGIN      
        1 tcggcgtcga accgccgaaa tcatcgatgt ccagtcccgc ggtccatggc gaggcgcccc
       61 cctcgccgcg ttgcaacgtg tcgccgccgc ctccatccat cgtcaggcag acgcgctcga
      121 tctgcggcgc aatgcggcgc aagatcatga gcgtgcgcca atcgaaggat tgaatgccca
      181 cccgcgcggc aagtcccgcc tcgcgcaccg cttgcagcac ggcagcagcg aacatttccg
      241 ggtccggcgt gtcggccccc gaagtcggcg tcaattttgt ttcgatgttg aagcggacat
      301 ggtcggcttt gacctgccgg actagatcga acaccgacgt gagcgtcggg atgcgcacgc
      361 catccattcc acgctgctcc gggaaggccg cggcgtaagc cgtgcccggc ttcaagcgtc
      421 cgacgtcata gcgctgcagc tgcgccaagg tcagcgaagg atcgccggtc cctcgccgtc
      481 gagaaacgtg ccgtccggtc cgcgcgtgtg gtcggggttg agacgcctgt cgtggctgac
      541 gacgagaacc ccgtcgctgg tcatagcgag atcgagctcg agcgtgctca caccgatcga
      601 caacgcggtg gcgaaggccg ggagcgtgtt ttccggtgcc aggccgcggg cgccgcgatg
      661 gccctgcagg tcgaatgcga ttttatccgg aggcctgaac tcattcgccg ctttggcgaa
      721 tttggcccac acgggaacta gcgccgcgat ggcggcgatg gtgagcaaat agatcgcacc
      781 aacacgcagc ggcatgtctc ggctcctcct gccgagaagg ctagttcgcc ggcatgtaac
      841 ttagatgacg cgggccacgc taggttttcg ccttctccgc ctcgatcttg cgccgcacga
      901 ttcgtcgcgc ggcaaccgtt gccttgtcgg cgtcgaggtt ggcgagcgcg gcgcgggcgg
      961 aatcgcgatc gatcatcgcc tgctggtgtt tgagcacctc ggcgtcttcg tcgaatgcgg
     1021 cgcgattcat ctcgaatagc cgctgaccga tcgcggcgtc atcgatccgc atgcgccggc
     1081 aaatcgacca gaaataatgc gtcgtgcgct cggtctcggg cgtgaggtgg ttgagcacga
     1141 cgtggtgcac gagatcgggg tcgtcgttcg cgccggccgg ggtggcttcg atgcgaatat
     1201 gcacgtggct gggcggaatg aacgtgatgt tctgatagcg gtcgatcttg tcgggaaagt
     1261 gccgcagcgt gcgaaagatc ggcgccggat cgacgcccct catctcgcgc cgcgcaatca
     1321 cgcgttcacc atcgacgcgc acgtcgagcg gattttcctg gataccggga ccggcgagcg
     1381 tggtcttgtg cacgaatgtc aggtgcgtga ggtcgagcag gttatcgacg acgagctgat
     1441 agttcgcttc gacatggcgc agcgcgccgg atgcagccca ggccgcgccg ccgttctcgg
     1501 gaaaatccgg gatcaacgac cgatcggccc ggaccggctc acccatccag acgtagacga
     1561 gaccggagcg ctccgccgct ggaaagctcc gcacgccgaa tcccgccggg atctgctttt
     1621 gtgccggaat atgggtacac gcgcccatgc cgtcgaaccg caacccgtgg tagccgcatt
     1681 cgatgtcatc gtcgacgagc tggcccctcg agagttgata gagacggtgc ggacagcgat
     1741 catcgagcac cgcgacggaa ttgtcgcggc gccggaacat caccagcggt tcgttgcaga
     1801 ccgtgcgcgc caagggggtg cggccgacct cgctgccgaa ggccgcgaca taccattgct
     1861 gaagcggaaa ggaaggtgtc gtcatcctgg cctcccttgg cttttgcaac ttcgaaacgc
     1921 cctatccgag atacgatatc acgtctcgtt cgcgtcgata acgacgaggc cgagggcacc
     1981 atcgtggctt cgattccgtg cgggcccaag gatttaatgg caactgaatt ttccgcttga
     2041 ctcgtgtaac gagaatcttc cagaagagcg tattcaccga tactgcgcca agagcccggg
     2101 cggcatgccg cgccgggttt ttcgttgcgc gaccgcgcct gcggccgcgc gcggcgggtt
     2161 tctcgtgttt gcgaaaaaac aggaaaaaac aggaaaaaac aggagagaac acagccatgc
     2221 gtttccaaaa aggcgaaagc gggaacccaa cgggacggcc gcgcggtgta ctcaatcacg
     2281 caacgttgct ggcgcaggaa ttgttggccg cacgcgtcga gagcatcgcg ggcaagctga
     2341 tcgagctcgc ggaaggcggc gacatgcgcg ccattcgcgt gtgcatggac cgacttgtgc
     2401 cggcgatcaa ggatcagccg a
//
LOCUS       DATCWM010000050         2179 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_248746, whole genome shotgun sequence.
ACCESSION   DATCWM010000050 DATCWM010000000
VERSION     DATCWM010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2179)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2179
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_248746"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..118)
                     /locus_tag="VIQ50_00935"
     CDS             complement(<1..118)
                     /locus_tag="VIQ50_00935"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEY9358968.1"
                     /translation="MAKKNVGVIGLGIMGGAFARNLVAAGWRVVGYDIDAARR"
     gene            268..1200
                     /locus_tag="VIQ50_00940"
     CDS             268..1200
                     /locus_tag="VIQ50_00940"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9358969.1"
                     /translation="MRGSSQEAGPMQIGIAGIGKMGAAIAQRLIEVGHTVTVWNRSAD
                     KLKPLAAAGAALAATPAELADKSEVVITILTDAAAIDAVYGGASGLLAGDVHGKLFIE
                     MSTVRPQTELALAAKVRAKDAAIVECPVGGSTSPARQGKLIGLMGAESADAARARPIL
                     EQLCRRLEHCGPIGAGAVMKLTINMPLMIYWQALGEALALCRPLGLDPARIMDLLADT
                     SGGPNVLKVRGAGVAQMLKGGDAGPVTFDVDSAVKDLRTMVAEGTAHGVELPLTETTL
                     GCYEETKRNVSGAAEVSSVSVYWANRAKRRSETA"
     gene            1241..1684
                     /locus_tag="VIQ50_00945"
     CDS             1241..1684
                     /locus_tag="VIQ50_00945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006936646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HEY9358970.1"
                     /translation="MSVVSLAQASTIVDAALKKGRETNCAPLTVAVLDAGGHLVAFKR
                     EDKSGLLRFDIAFGKAWGALGMGFGSRTLAARAAKTPQFFTMLAAASGGRMVTNPGGV
                     LIRSATGDIVGAVGISGDTSDRDEACAVAGIEAAELKADPGQDAN"
     gene            complement(1784..>2179)
                     /locus_tag="VIQ50_00950"
     CDS             complement(1784..>2179)
                     /locus_tag="VIQ50_00950"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEY9358971.1"
                     /translation="VPGPQNVRRRNLETYFHTHGVALAAMLEMDAMIGTLEFVARSDW
                     VTVLPSLICINDVGKGDLVVNPIINPTLRAEFVVIQPARRTLSLPARRFLECFEAQVA
                     NIHARWERALTPVAANGRRARNSGVRQRA"
BASE COUNT          387 a          713 c          729 g          350 t
ORIGIN      
        1 ggcggcgggc ggcatcgatg tcgtaaccca caacgcgcca cccggctgcg acgagattgc
       61 gcgcgaacgc gcctcccatg atgccgagcc cgatgacgcc gacgttcttc ttcgccattg
      121 ccagtctccg ttggcgagtc catcccacgg cgacgctaca cggcggtttc acctgcgttc
      181 aagcgcgatc tgcgcatcgg ccaccgcagg actatctcac gcctgcctaa tcccttatcg
      241 tcacgccgac tgccgaacga cgcggcagtg cggggaagct cacaggaggc aggtccgatg
      301 caaatcggca tcgccgggat cggcaaaatg ggcgcggcga tcgcgcagcg gctcatcgaa
      361 gtcggacaca cggtcaccgt gtggaaccgc tccgccgata aactgaagcc gctcgccgct
      421 gccggcgccg cgctggccgc cacgcctgcc gaactcgcgg acaaaagcga ggtcgtcatc
      481 accattctca ccgatgcggc cgcaatcgac gcggtctatg gcggcgcatc ggggctgctc
      541 gccggcgacg tgcacggcaa gttgttcatc gagatgagca ctgtgcggcc gcagaccgag
      601 ctcgcgctgg ccgccaaggt gcgcgccaag gacgccgcaa tcgtcgaatg cccggtgggc
      661 ggctcgacca gtccggcgcg gcagggcaag ttgatcggat tgatgggcgc cgagtccgcc
      721 gacgctgcac gcgcgaggcc gatcctcgaa caactttgcc gccgtctcga gcattgcggg
      781 ccgatcggcg ccggcgcggt gatgaagctc accatcaaca tgccgctgat gatctattgg
      841 caggcgctcg gcgaggcgct cgcgctctgc cgtccgctcg ggctcgatcc agcgcggatc
      901 atggaccttc tcgcggatac ctcgggcgga ccaaacgtgc tcaaggtacg cggcgcaggc
      961 gtggcacaga tgctcaaggg cggcgacgcc gggccggtga ccttcgatgt cgacagcgca
     1021 gtcaaggatc tgcgcacgat ggtagcggaa ggcacagcgc acggcgtaga gctgccgctc
     1081 accgaaacga cgctcggctg ctacgaggag accaagcgaa acgtctcggg cgcggcggag
     1141 gtatcctcag tgtcggttta ttgggcgaac cgcgccaagc ggcgatcgga aactgcctaa
     1201 gccaagaact ttcctctcaa cgaccatttg gagcgccgaa atgtccgtcg tcagccttgc
     1261 tcaagcctcg accatcgtcg acgccgcgct caaaaagggg cgcgagacga attgtgcgcc
     1321 gctcaccgtc gccgtgctgg atgccggtgg tcacctggtg gcgttcaagc gcgaggacaa
     1381 gtccggcctc ctgcgttttg acatcgcatt cggcaaggcc tggggcgcgc tgggcatggg
     1441 cttcggctcg cgcacgctcg cggcgcgcgc ggccaagacg ccgcagttct tcaccatgct
     1501 ggcggctgcc agcggcggac gcatggtgac caatcccggc ggcgtgctga tcagaagcgc
     1561 caccggcgac atcgtcggcg ctgtggggat ttccggcgat acgtcggatc gcgacgaggc
     1621 ctgtgccgtt gccggcatcg aggcggcgga actgaaagcc gatcccgggc aggacgcgaa
     1681 ttgatttctg cgaggctcat tccgcggaga gcgccggcgc aaatctgcca accctgcaca
     1741 agctcggctg cctgcgcacg cgaacccgga ataacgagtc cgatcaggct cgctgccgga
     1801 cgccagagtt tcgcgctctg cggccatttg ccgcgaccgg cgtcagcgcg cgctcccagc
     1861 gcgcgtggat gttggccact tgcgcttcga agcattcgag gaaccgccgt gccggcaggc
     1921 tcaaggtgcg tcgcgccggc tggatgacga cgaactcggc gcgcaaggtc ggattgatga
     1981 tcggattgac cacgagatcg cccttgccga cgtcgttgat gcaaatgagg cttggcagca
     2041 cggtcaccca gtcggagcgc gcgacgaatt cgagcgtgcc gatcatggca tccatttcca
     2101 gcatggcggc gagcgccacg ccgtgggtgt ggaaataggt ttcgaggtta cggcggcgaa
     2161 cgttctgcgg cccgggcac
//
LOCUS       DATCWM010000051         2183 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_507841, whole genome shotgun sequence.
ACCESSION   DATCWM010000051 DATCWM010000000
VERSION     DATCWM010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2183
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_507841"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            242..1516
                     /gene="oxlT"
                     /locus_tag="VIQ50_00955"
     CDS             242..1516
                     /gene="oxlT"
                     /locus_tag="VIQ50_00955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxalate/formate MFS antiporter"
                     /protein_id="HEY9358972.1"
                     /translation="MATSTSEAISSRATASEATRWGQLIFGIICMVMIANLQYGWTLF
                     VNPIDQKYHWGRAAIQVAFTIFVLTETWLVPFEGYLIDRFGPKIMVCGSGFLVAIAWM
                     MNAYADSLALLYLAAAIGGIGAGVIYGASVGNALKWFPDRRGLAAGLTAAGFGAGSAL
                     TVVPIANMIGSDGFEAAFWWFGIGQGLVVIIFSLFLRAPEAGEVAIPAAPAVQQTRRD
                     YGPIEVLKTVPFWVMYVMFVMVGTGGLMATAQLAPIAKDFKVDVIPVTILGLTLPALQ
                     FALSIDRVLNGVTRPFFGWVSDHIGRENTMFIAFMLEGIGIYALLHFANDPFLFVILS
                     GLVFFAWGEIYSLFPATCTDIYGRKFATANYGLLYTAKGTAALLVPLGNVLTSWTGSW
                     TAVFVIAAILNIIAAVMAPLVLRPLRQRAMAA"
     gene            complement(1612..1770)
                     /locus_tag="VIQ50_00960"
     CDS             complement(1612..1770)
                     /locus_tag="VIQ50_00960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9358973.1"
                     /translation="MTDLAARFVYSPLVSTSVKVVCLFCVLGLALSAVIVPLIAPEHL
                     TWVLSHIE"
     gene            1911..>2183
                     /locus_tag="VIQ50_00965"
     CDS             1911..>2183
                     /locus_tag="VIQ50_00965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018964174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEY9358974.1"
                     /translation="MSSASRSRRAGVRAPSARHLAGVAVSPRVERIGSPDSFKSRAYA
                     ALKDAIVAMDVYRSRADIRLDERRLALDFGISRTPVREAMAQFEREG"
BASE COUNT          354 a          675 c          718 g          436 t
ORIGIN      
        1 gcgccgccac gggggtcgag aatgttgcgg cgcacaaagg ggtgcggcac cgcgtcccgc
       61 gcgtcgcagc gggattccag gcattctttg tgccacgctg gcgttagtca aaccgtcgtg
      121 caaaaacggc gttgaaggaa cgagattgaa acgtcggctc gcggatggga gcgggcttgt
      181 agattaaggg gtgcgagggc aagcgtgctg cgcgatcaat aaggctggga tggaggaagc
      241 ggtggcaaca agcacatcag aagcgatttc gtcgcgcgcg acggcgtccg aggcgacgcg
      301 ttggggccag ttgatcttcg gcatcatctg catggtgatg attgccaact tgcaatacgg
      361 ctggacgcta ttcgtcaatc cgatcgacca gaaatatcat tgggggcgcg cggcgatcca
      421 agtcgcgttc acaattttcg ttctcaccga gacttggcta gtgccgttcg agggctatct
      481 gatcgaccgg ttcggcccca agatcatggt ctgcggcagc ggcttccttg tggcgatcgc
      541 gtggatgatg aatgcctacg ccgattcgct tgcgctcctt tatcttgccg ccgccatcgg
      601 cggcatcggc gccggggtca tctacggcgc ttcggtcggc aacgcgctca agtggttccc
      661 cgatcggcgc ggtcttgccg cagggttgac cgcggcgggc ttcggcgccg gctcggcgct
      721 gaccgtcgtg ccgatcgcca acatgattgg gtcggacgga ttcgaggccg cgttctggtg
      781 gttcggcatc ggccaaggcc tcgtcgtcat cattttctcg ctcttcttgc gcgcccccga
      841 ggccggcgag gtagcgatac cggccgcgcc ggccgtgcag cagacgcggc gcgattacgg
      901 tcccattgag gtgctgaaga cggtgccgtt ctgggtcatg tacgtcatgt tcgtcatggt
      961 cggcaccggc gggcttatgg cgacggcgca actcgcgccc atcgccaagg acttcaaggt
     1021 cgacgtcatt ccggtgacga ttctcggcct gacgctgccg gcgctgcaat tcgcgctgtc
     1081 gatcgatcgc gtgctcaacg gcgtcactcg gccgttcttc ggctgggttt ccgaccatat
     1141 cggtcgcgag aacacgatgt tcatcgcatt catgctggaa ggcatcggca tctatgcctt
     1201 gttgcacttt gccaacgatc cgttcctgtt cgtgattctg tcggggctgg tgttcttcgc
     1261 ctggggcgag atctactcgt tgttcccggc gacctgcacc gacatctacg gccgcaagtt
     1321 tgccaccgcg aactacggcc tgttgtacac ggcgaaaggt acggcggcct tgctggttcc
     1381 actcggtaac gtgctgacga gttggaccgg cagctggacg gcggttttcg tgatcgccgc
     1441 gattctcaat attatcgccg cggtcatggc gccgctggtg ctgcggccgc tgcgacagcg
     1501 cgccatggcg gcttgacggt gaggtccacc gcgtccgcgc cgctatccgc gcggacgcgc
     1561 ctcggggtta cgccatagcc cggcgcgaat gaggcgacga taggcggagc gtcattcgat
     1621 gtgcgacagc acccaagtca gatgctccgg cgcgatcaac ggaacgatca cggccgagag
     1681 cgccaatccc aggacgcaga acaggcacac gactttcacg ctggtcgaaa cgagcggcga
     1741 gtagacgaag cgggcggcaa ggtcggtcat ggactcctcc tcggtatcgc tccgcagtcc
     1801 tagcgtttct cccgccgcgg ccctgtgagc cggctcacac ctgccggcgg tttttgcggc
     1861 gccctccgcc ggttgcgtcc gttggagctg tggaatattg tataccagcc atgagtagcg
     1921 ccagccgcag tcgccgtgcc ggggtccgcg ccccatccgc gcgccatctc gcgggggtcg
     1981 cagtatcgcc acgcgtcgag cgcatcggca gtcccgacag cttcaagagc cgcgcgtatg
     2041 ccgcgctcaa ggacgccatc gtggccatgg acgtctatcg cagtcgcgcc gatatccgcc
     2101 tcgacgagcg gcggctcgcg ctggattttg gcatcagccg cacgcccgtg cgcgaagcca
     2161 tggctcaatt cgagcgcgaa ggc
//
LOCUS       DATCWM010000052         4142 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_264977, whole genome shotgun sequence.
ACCESSION   DATCWM010000052 DATCWM010000000
VERSION     DATCWM010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4142
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_264977"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..785)
                     /gene="senB"
                     /locus_tag="VIQ50_00970"
     CDS             complement(<1..785)
                     /gene="senB"
                     /locus_tag="VIQ50_00970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012457150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0001887 - selenium compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenoneine biosynthesis selenosugar synthase
                     SenB"
                     /protein_id="HEY9358975.1"
                     /translation="MRWARILRQLGHRVHIAHRYDGAVADLMIALHAWRSADSIRTFR
                     ERYPDRPLIVGLSGTDIYDYIDRDRASVLRSLACADRLIALQELASRRVPARFRDKVR
                     IVHQSALPVRRRRTERTGSFDVAVIGHLREVKDPFRAAQAARRLPATSRIRIVHLGVA
                     ATPGWAAAAKAEMAANPRYVWRGDRPRADVRRLLGRARAMVLSSLSEGGANVISEAAV
                     AGVPILATRIAGSLGLLGRDYPGYFPVGDTEALARLLTRIETDR"
     gene            847..2169
                     /gene="senA"
                     /locus_tag="VIQ50_00975"
     CDS             847..2169
                     /gene="senA"
                     /locus_tag="VIQ50_00975"
                     /inference="COORDINATES: protein motif:HMM:NF041186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:1903257 - selenoneine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenoneine synthase SenA"
                     /protein_id="HEY9358976.1"
                     /translation="MNEALLYRPTSGATADDLVAQLCDARSCTRRLTDDLTAQQLMGP
                     MLPIVNPILWEIGHVGWFHEYWTLRHAHGQAPILERADRLWNSSAVAHATRWDLDLPD
                     REGVFGYLADVLSHQIDRLGGGVDHPACYFYELSIRHEDMHVEALAYTRQTLGYARPQ
                     GLGRPAADRAGAWEGDVAVPGGYWQLGSTSADGFVFDNEKWAHDVEIAPFHIAKAAVT
                     NAEFAAFVDQGGYRRREFWSAPGWEWRERVAAEHPVYWLHNQGGSWTWRSHDKQEALP
                     PHAPVTFVNWYEAQAYCNWAKRRLPSEAEWEAAALGEASADGTRLTSAKRRWPWGEAA
                     PDRGRANLGLACDGPLDVAACAAGDSAFGCRQMSGNAWEWTASDFAPFACFAADPYED
                     YSKPWFHTRKVLRGGSFATSARVARPLYRNFFTPERNDVIAGFRTCAL"
     gene            2157..3965
                     /locus_tag="VIQ50_00980"
     CDS             2157..3965
                     /locus_tag="VIQ50_00980"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007615328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY9358977.1"
                     /translation="MRAVSEPGLKPSGRLPTLARTDSLASIVGAWLSQFEGALAAPGR
                     ARLKALFHAESYWRDVLALTWHLKSVSGSDAMLRELAMHAGRVRPTGFKIDRHRTAPR
                     NVTRAGTDAIEAIFSFETSEGRGSGVLRLTPSAHDGKAFKAWTLLTSLDEIKGHEERL
                     GRLRPQSKAYSRDFRGPNWLDLRKAAAKYADRDPSVLVVGGGQAGLSIAARLTQLDVD
                     TLIADREARIGDNWRKRYHALVLHNQVHVNHLPYMPFPPNWPTYIPKDKLAAWFEAYV
                     ESMELNYWTATEFEGGSYDEKAKRWSVLLRRADGTRREMHPRHVVMATGASGIPSIPD
                     IPSLRDFHGEVLHSSRYDDGEAWKGKNVLVIGSGNSGHDIAQDLHSAGAKVTLVQRGS
                     TMIVNVEPSAQLQYALYDEGPSLEDCDLITMSMPLSLVRKSHIGLTETAREIDKELLD
                     GLEHRGFKLDFGEDGTGWQFKYLTRGGGYYFNVGCSDLIVKGEIGLAQFSDIATFVPA
                     GALMRTGETIPAELIVLATGYKGQEYLVGKLFGEDVADRVGPIWGFGEGQELRNMFTR
                     TAQPGLWFIAGSFAQCRIYSKYLALQIKASEIGLLP"
BASE COUNT          772 a         1274 c         1350 g          746 t
ORIGIN      
        1 cgatccgtct cgatgcgggt cagcaaccgc gccagcgctt cggtgtcgcc gaccggaaaa
       61 tagcccggat agtcgcgtcc gaggagccca agcgagccgg cgatgcgcgt cgccaatatt
      121 ggaacgccgg caaccgcggc ctcggatatg acgtttgctc cgccctcgct caacgatgac
      181 agaaccatcg ctcgcgcgcg cccgagcagg cgacggacat cggcacgcgg cctgtcgccg
      241 cgccagacat agcgcgggtt ggcagccatc tcggccttcg ctgccgctgc ccaacccggc
      301 gtcgcggcca cgccgagatg cacgatgcga atccgcgagg tcgccggcaa gcggcgcgcg
      361 gcttgcgcgg cacgaaacgg atctttgact tcgcgcaaat ggccgatgac ggccacgtcg
      421 aagctgccgg tacgctcggt ccggcggcgg cgtaccggca gcgccgattg atgaacgatg
      481 cgaactttat cgcgaaaccg tgccggcacg cgccggctcg cgagctcctg cagcgcgatt
      541 agccgatcgg cgcaggcgag cgagcgcaaa accgacgctc gatcgcgatc gatgtagtcg
      601 tagatgtcag tgccgctcaa gcccacgatc agtggccgat ccgggtatcg ctcgcgaaag
      661 gtgcggatgc tatccgcgct gcgccaagcg tgcagggcaa tcatcagatc tgcgacggct
      721 ccgtcgtagc gatgggcaat gtgaacgcga tgtccgagct ggcgcaagat ccgcgcccag
      781 cgcatgctcg tggtcctgtt tccggaccgt gacgataaac gcgccggcgt gataagaacg
      841 atgttcatga acgaggctct tttataccgg ccaacgagcg gtgctacagc tgacgatctc
      901 gtcgctcagc tttgcgacgc gcgcagctgc acccgtcgcc tcaccgatga tctcacggcg
      961 caacagttga tggggccgat gttgccgatc gtcaatccca tactgtggga gatcggacat
     1021 gttggctggt tccatgaata ctggacgctt cggcatgcgc acgggcaagc gccgattctc
     1081 gagcgcgccg accgtttgtg gaattcgagt gcggtcgccc atgcgacgcg atgggatctg
     1141 gacttgcccg atcgcgaggg cgtgttcgga tacctggcgg acgtgctctc gcaccagatc
     1201 gaccgccttg gcggcggggt cgatcacccc gcctgctatt tctacgagct ttcgatccgc
     1261 cacgaggaca tgcacgtcga ggcgctcgcc tatacgcgcc agacgctcgg atatgcgcgg
     1321 ccgcaagggc tcggccgtcc ggccgccgat cgcgcgggcg cgtgggaagg cgatgtcgct
     1381 gtgccgggcg ggtactggca gctcggttcg acgtcggctg atggcttcgt tttcgacaac
     1441 gagaagtggg cgcacgatgt cgagatcgcg ccgttccaca tcgccaaagc cgccgtcacc
     1501 aacgccgagt tcgccgcgtt cgtggaccag ggcggctatc gccggcggga attctggagc
     1561 gcgccgggct gggaatggcg cgagcgggtg gccgccgagc atccggtcta ctggctccac
     1621 aatcagggcg gcagctggac gtggcgcagc cacgacaagc aggaagcgct gccgccgcat
     1681 gcgccggtga cctttgtcaa ctggtacgag gcgcaagcct actgcaattg ggccaagcgc
     1741 cggctgccct ccgaggccga gtgggaggcc gcggcgctag gcgaagcgag cgcggacggc
     1801 acgcgcttga cctcggccaa gcgccgctgg ccctggggcg aggcggcacc ggatcgcggg
     1861 cgcgccaacc tcggcttggc ctgcgacggt ccgcttgatg tcgccgcttg cgccgcgggc
     1921 gacagcgcgt tcggatgccg gcagatgagc ggtaacgcgt gggagtggac cgcttcggat
     1981 tttgcgccgt ttgcctgctt tgccgcggat ccgtacgagg attattcaaa gccctggttt
     2041 cacacgcgca aggtcttgcg cggcgggagc tttgccacca gcgcccgcgt cgcgcggccg
     2101 ctctaccgca acttctttac gcccgagcgc aacgacgtca tcgccggatt ccgcacatgc
     2161 gcgctgtgag cgagccgggg ctgaagccaa gcgggaggct gccaacgctg gccagaacag
     2221 acagcctcgc gagtattgtg ggggcgtggc tgtcgcagtt cgaaggagcg ctcgccgcgc
     2281 caggccgagc tcgcctcaag gcgctgtttc atgctgagag ctattggcgt gatgtgctag
     2341 ccctgacatg gcacctcaag agtgtgagcg gttcggatgc gatgttgcga gagcttgcaa
     2401 tgcatgccgg tcgcgtccgc ccgactggtt tcaagataga tcggcatcgg actgcgcccc
     2461 gcaacgtgac tcgcgccggc accgatgcga tcgaagccat ttttagcttt gaaacctcgg
     2521 agggtcgcgg cagcggcgtc ctacgactca cgcctagcgc ccatgacggc aaggcattca
     2581 aagcatggac gctgctgacg tcgcttgatg aaataaaggg acacgaggaa cggctcggaa
     2641 gattacggcc tcaaagcaag gcctattccc gcgattttcg cggacctaac tggctcgacc
     2701 tacgcaaggc cgccgctaaa tatgccgacc gcgacccctc agtgctcgtt gtcggcgggg
     2761 gacaagcggg gttgtcgata gccgctcgcc tcacacaatt agacgtcgat actctgatcg
     2821 cggaccgcga agcgcgcatc ggagacaact ggcgcaagcg gtatcacgcg ctggttctgc
     2881 acaaccaggt gcacgtcaac catctgccgt acatgccgtt tccgccaaac tggccgacct
     2941 acattcccaa agacaaactg gccgcttggt tcgaggccta tgtggagagc atggaattga
     3001 actattggac ggccaccgaa ttcgaaggtg gtagctacga cgaaaaagcg aagcgatggt
     3061 ccgtcctgtt gcgtcgggcc gacggcacca ggcgggagat gcatccgcgg cacgtcgtga
     3121 tggccaccgg ggcaagcggc attcccagca ttccggatat tccgagcttg cgcgacttcc
     3181 atggtgaagt tctgcactcc agccgatacg acgatggcga ggcgtggaag ggcaagaacg
     3241 ttcttgtcat cggctcgggc aacagcggtc atgatattgc gcaggacctc cattcggctg
     3301 gggcgaaagt gacgctcgtg caacgcggct cgaccatgat cgtcaatgtc gagccgagtg
     3361 cgcaactgca gtatgcgctc tatgacgaag gaccttcgct cgaggattgc gatctcatca
     3421 cgatgtcgat gccgctatcg ctggtacgga aaagccacat cggattgacc gaaaccgcga
     3481 gggagatcga caaagaattg ctcgatgggc ttgagcaccg cggcttcaag ctcgatttcg
     3541 gcgaggacgg caccggctgg cagttcaaat acctcacccg cggcggcggc tactacttca
     3601 atgtcggctg ttcggatctg atcgtcaaag gcgagatcgg attggcgcag ttctccgata
     3661 tcgccacttt cgtgccggcg ggagcgctga tgcggaccgg cgaaacgatt cccgccgagt
     3721 tgatcgtgct ggcgacaggt tacaaggggc aggagtattt ggtcggcaaa ttgtttggtg
     3781 aggatgtcgc cgatcgggtc ggcccgattt ggggattcgg tgaagggcag gaattgcgca
     3841 acatgttcac gcgcaccgcg caaccaggcc tttggttcat cgcgggcagc ttcgcccaat
     3901 gtcgcatcta ctcgaaatat ctcgccctcc agattaaggc ctccgaaata ggcctcctgc
     3961 catagttgta tagctgccgg gaatcacggg cgcgacaatc gatggtggca agtcgtgcac
     4021 ccgcggctat tcggcacgag gaacgcgttc atcgtgctat cacgatcgtg gtgcaggcgc
     4081 tttccagctt tggcagctca cggctcgtcg ccatcctcac ctcgagcttg cggccgccgc
     4141 cg
//
LOCUS       DATCWM010000053         2228 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_513244, whole genome shotgun sequence.
ACCESSION   DATCWM010000053 DATCWM010000000
VERSION     DATCWM010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2228)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2228)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2228
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_513244"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1099
                     /locus_tag="VIQ50_00985"
     CDS             <1..1099
                     /locus_tag="VIQ50_00985"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEY9358978.1"
                     /translation="LAETLLKIAPVPMARVVFQCSGSEANDTAVKLAWYYWNAVGEPQ
                     RTKIIARRMGYHGSTCAAVSLSGKPDMHAGFALPFAPFKHTEFPHYYRRHEPGETETQ
                     FSARMAEALETLIQAEGPQTIAAFFAEPVMGAGGGIVPPSGYFEKVQAVLRKYDILFV
                     ADEVICGFARSGEMWGSQTYALRPDMVTSAKALSAAMQPISAVLVNERIHEAMLAQSD
                     KLGNFAHGFTYAGHPVAAAVALEVQKIYAEIDIVGRAKRLGPVLQSALGRLEAHPLVG
                     DVRGVGLIFGMELMRDGERRVPFDAALNVGGRVDAAAQRHGLLVRVIGDRLVFAPPLV
                     IEAAEIEDIAARLHRALNEVADDLTREGALG"
     gene            complement(1158..1286)
                     /locus_tag="VIQ50_00990"
     CDS             complement(1158..1286)
                     /locus_tag="VIQ50_00990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9358979.1"
                     /translation="MRNRLDSRIPDTAPYKEWLGIVGSMLAAVAICGALFAGGFFT"
     gene            1737..>2228
                     /locus_tag="VIQ50_00995"
     CDS             1737..>2228
                     /locus_tag="VIQ50_00995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018321821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9358980.1"
                     /translation="MAIPTPATIFTRDVLGNYMCNTFSEALNSGPFDVIIVGGGTFGL
                     ALAQDLFFRSRETGDGSIAEDGIRPPHFRILVLEAGPFLLPEHVQDVPSLGLANPGTQ
                     APFPPGSGLPATRQELIAQGNDKKTISEAWGLPWNSTERFGGLAYCLGGRSLYFGGWS
                     PRYL"
BASE COUNT          395 a          711 c          708 g          414 t
ORIGIN      
        1 gctcgccgag acgctgctca aaatcgcgcc cgtgccaatg gcgcgcgtgg tgttccagtg
       61 ctcgggctcg gaggcaaacg acactgcggt gaagctcgcc tggtactact ggaatgcggt
      121 cggcgagcca caacgcacca agatcatcgc gcgccgcatg ggctaccacg gcagcacctg
      181 cgccgccgtc agcctttcgg gaaagcccga tatgcatgcg ggcttcgcct tgccgtttgc
      241 gcccttcaag cacaccgaat ttccccatta ctaccgccgc cacgagccgg gagagacgga
      301 gacgcagttt tccgcccgta tggccgaggc gttggagacg ctcatccagg cggaaggtcc
      361 gcagacgatt gccgcgtttt tcgccgagcc ggtcatgggc gccggtggcg gcatcgttcc
      421 gccttccggc tatttcgaga aggtgcaggc ggtgctgcgc aagtacgaca ttctgttcgt
      481 agccgacgag gtgatttgcg gctttgcccg cagcggcgaa atgtggggct cgcagaccta
      541 tgcgcttcgt cccgacatgg tgacctcggc caaggcgctc tccgccgcca tgcagccgat
      601 ctcggccgtg ctcgtcaacg agcgcatcca cgaggcgatg ctcgcgcaat ccgacaagct
      661 cggcaatttc gcgcacggct tcacctatgc cggccacccg gtcgccgccg ccgtcgcgct
      721 cgaggtgcag aagatctatg cggagatcga catcgtcggc cgcgccaaac gcctgggccc
      781 cgtgctgcag tcggcgctcg gccggctcga ggcgcatccg ctcgtgggcg acgtccgcgg
      841 ggtcggcctg atcttcggca tggaactgat gcgcgacggc gaaaggcgcg ttccctttga
      901 cgccgcgctc aatgtgggcg gccgcgtcga tgcagcggcc cagcgccacg ggctgctggt
      961 gcgcgtcatc ggcgacaggc tggtgtttgc tccgccgttg gtgatcgaag ccgccgaaat
     1021 cgaagacatc gccgcgcggc ttcaccgcgc gctcaacgag gtggccgacg atctcacgcg
     1081 tgaaggcgcg ttaggatgac gaacggcgcg gccaagcaag atgggctttg cttccgctca
     1141 gcccagctcg cgaactctca cgtgaagaag ccgccggcga acagcgcccc gcaaatcgcg
     1201 accgccgcca gcatcgagcc gacaatgccg agccactcct tgtagggcgc cgtatcggga
     1261 attctgctgt ccaacctgtt gcgcatggca tcccccgttt gacatctgct gttgtgccgt
     1321 ctcctgtgtc cgcgaacgct tgtgctggac aatggtggcg acaattgcgg agagtcgcgc
     1381 gcgctcgcga gaaagcggcg cagtgtagct ttttggtcac agcacaagca gacatagctc
     1441 gctcgcgctc gagtagatgg ttctcgttgg ggcacgaaac agaaaagacc gcggccgcgt
     1501 ttgagcaggg tcggctctcg ctaattgggg cgctctgggg cattgtggcc cggaacgatc
     1561 gccgaacaga cggctaccct tttgttaccc aacgcgtagc ccgggacgag gcgggacggg
     1621 acgaaaatgc cctcccatct aactagttat gggcagggat cagcgcttca tcacaggttc
     1681 actagaaagc gctataaaga caaagcaaag gtagttcccg cagggaggca acgctaatgg
     1741 ccatcccgac gcccgcgacg atcttcactc gcgatgtcct cggcaactac atgtgcaata
     1801 ccttctccga ggcgctgaat agcgggcctt tcgacgtcat cattgtgggt ggcggcacgt
     1861 tcggcctcgc gctcgcacag gatctcttct ttcgttcgcg cgagacaggc gacggaagca
     1921 ttgctgaaga tgggatcagg ccaccccact ttcgcatcct ggtgttggag gccggtccgt
     1981 tccttctgcc cgagcacgtg caggacgttc cgagtctcgg gctagccaac cctggcactc
     2041 aagcaccgtt tccgcccggt agcgggttgc ccgcaactcg tcaggaattg atcgcgcagg
     2101 ggaatgacaa gaagacgatc tcggaagcgt ggggcctgcc gtggaattcg accgagcggt
     2161 tcggcggcct tgcgtattgc ctcggaggcc gttcgctgta cttcggcggc tggtcgcctc
     2221 gctacctc
//
LOCUS       DATCWM010000054         3071 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_248761, whole genome shotgun sequence.
ACCESSION   DATCWM010000054 DATCWM010000000
VERSION     DATCWM010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3071
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_248761"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..180
                     /locus_tag="VIQ50_01000"
     CDS             <1..180
                     /locus_tag="VIQ50_01000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEY9358981.1"
                     /translation="LAPDPLPIETFTAFVRTSNRAMPPYPEAVLSNDDLADIHAYLEA
                     IPKRADYKDIPLLNQ"
     gene            complement(398..1393)
                     /locus_tag="VIQ50_01005"
     CDS             complement(398..1393)
                     /locus_tag="VIQ50_01005"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDR/VanB family oxidoreductase"
                     /protein_id="HEY9358982.1"
                     /translation="MTTATAAPGEAMPANTADGLIEVRVTAIRYAARDTHLYEFAPLD
                     GKPLPAYEPGAHIDLHLPNGLIRQYSLIRAEPDPSSYSVSVKRDPASRGGSRYVHDEL
                     RVGRTLKISAPRNNFPLVENAGHVVLLAGGIGITPIWCMVQRLHKLGRSFKLYYACRS
                     RADMAFLQGLEAIGRTHFHFDDENGDKVLDIKPIISEAPRDAHLYCCGPTPMLKAFEA
                     ATADWPRAQVHVEYFTPKPGAEEKKGGFVVELARSGQEFVIPAGKSILQVLLDAGVDV
                     DYSCELGICGACEQRVISGTPEHRDAILTEEEQASNTKVMICCAGCKSERLVLDL"
     gene            complement(1614..2864)
                     /locus_tag="VIQ50_01010"
     CDS             complement(1614..2864)
                     /locus_tag="VIQ50_01010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007761608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9358983.1"
                     /translation="MDLLAERGRRVSIDELNTTRLLAHARKQAVQRKLDDVLIVDVDA
                     HHYENEHYNDILPYMENDVFRQWTMGGRGMTDRGAVVPTNAGFIQDMGGRVTRYPLRR
                     SEKTQQDGKHRDVQLGERWMDAMSVDYSCLFPTGMLNIGMHPQKEMESDLCWAYNRWV
                     TEKVLPESGGRMYSMLCLPFSDPAACVRQVETFGARPGVTGFMVTTVRHLQVNDNVYM
                     RLYRTMEERGLALAFHSGPNWQEPVFRACNRFLSVHALGFTFYNILHCTNWVINGMGE
                     RFPKLPVVWIESGLAWIPFLMQRLDHEFMMRPSEAPLLKKKPSDYMREMYYSSQPMEI
                     QDRQALECTFRMINAETQLLYSSDYPHWDFDLPSTIYDLPFLSEKAKHNILGGTAARL
                     FKLPPRNEKQRENLARFGNLAAAA"
BASE COUNT          547 a          972 c          979 g          573 t
ORIGIN      
        1 cttgcgccgg atccactgcc gatcgagaca ttcaccgcct tcgtgcgcac cagcaatcgt
       61 gccatgccac cgtacccgga ggcggtcctc tccaacgacg acctcgccga tatccatgcc
      121 tacctggagg cgatcccgaa gcgggcggat tacaaggata ttcccctgct caaccagtag
      181 agcagagcgc cgccctcatc ctgaggtgcg cgcgttaaag gtgaaagcac aatagtcaga
      241 ctcgcgtgcg cgcgtttcga aggatggggg cggcctcatg cttcgagacg catcgcagcg
      301 ccggccactt gcgcatgcag cataaatttg gacgcgctgc gttcctcctc agcatgaggc
      361 caaccggttc actcgtctgc agatcgacta ccggcgctca caggtcgagc accagccgct
      421 cgcttttgca acctgcgcag cagatcatca ccttggtgtt ggaggcctgc tcctcctcgg
      481 tgaggatggc gtcgcggtgc tcgggggtgc cggaaatcac ccgctgctcg caggcgccgc
      541 agatgccgag ctcgcaggag tagtcgacgt ccacgccagc atcgagcagc acctgcagga
      601 tgcttttgcc cgcgggaatg acgaattcct gtccggagcg cgccagctcg accacgaacc
      661 cgcctttctt ctcctccgcc cccggtttgg gtgtgaaata ttcgacatgg acctgcgcgc
      721 gcggccaatc tgcggtggcg gcttcgaatg ccttgagcat cggcgtcggc ccgcagcaat
      781 aaaggtgcgc gtcccgcggt gcctcgctga tgatcggttt gatgtcgaga accttgtcgc
      841 cgttctcgtc gtcgaaatgg aaatgcgtgc ggccgatcgc ttcgagacct tgcagaaacg
      901 ccatatcggc gcgcgagcgg caggcatagt aaagcttgaa cgagcggccg agcttgtgca
      961 gccgctgcac catgcaccag atgggggtga tgccgatacc gcctgccagg agcacgacgt
     1021 gtccggcgtt ctccaccagc gggaaattgt tgcgcggcgc gctgatcttc agcgtgcggc
     1081 cgacgcgcag ttcgtcgtgc acgtaacgcg agccgccccg gctcgcagga tcgcgcttga
     1141 cgctgacgga atagcttgac ggatcaggct cagccctgat cagcgaatat tggcggatca
     1201 atccgttcgg caaatgcaga tcgatatgcg cgcccggctc gtaggccggc agcggctttc
     1261 cgtcgagcgg cgcaaactcg tagaggtgcg tgtcgcgcgc tgcgtagcgg atcgcggtga
     1321 cgcgcacttc gatcaagccg tcggcggtgt ttgccggcat cgcctcgccg ggcgcggccg
     1381 tcgctgtagt caacgatgtt tctccctgcg gcagcgctgg cgtcatcggc cacgcaagct
     1441 cgtttgtcaa ttgtcggcca tgagatatgc gctgcgcgcg ggcaatccaa gtcgcggaaa
     1501 agccaagcga atcccaagca ggccggccgc gccggcggcg gccgagcgcg cgcgtttcgc
     1561 tcgcgccaag aaggcgggcg caggttgccc ctacgcgatc ggcggaatga cgatcaggcc
     1621 gccgcggcga gattgccgaa gcgggcgagg ttctcgcgct gcttctcgtt gcgcggcggc
     1681 agcttgaaca gccgcgccgc ggtgccgccg aggatattgt gcttggcctt ctccgagagg
     1741 aagggcaggt cgtagatcgt ggacggcaga tcgaaatccc agtgcggata gtccgaggag
     1801 taaaggagct gcgtctcggc gttgatcatg cggaaggtgc attccaacgc ctggcggtcc
     1861 tggatctcca tcggttgcga ggagtagtac atctcacgca tgtagtcgga gggcttcttc
     1921 ttcaagagcg gagcttccga cggccgcatc atgaattcgt ggtcgagccg ctgcatcagg
     1981 aacggaatcc aggcgagtcc cgattcgatc cagaccaccg gcagcttggg gaagcgctcg
     2041 cccatcccgt tgatcaccca attggtgcaa tgcaggatgt tgtagaacgt aaatccgagc
     2101 gcgtgcaccg acaggaagcg gttacaggcg cggaataccg gttcttgcca attcggcccg
     2161 gaatggaacg caagcgcgag cccgcgctcc tccatggtgc gatagagccg catatagacg
     2221 ttgtcgttca cctgcaggtg ccgcaccgtg gtgaccatga agccggtcac gcccggccgg
     2281 gcgccgaagg tctcgacctg ccgcacgcag gcggcgggat cggaaaacgg caggcacagc
     2341 atggagtaca tgcggccgcc cgattccggc agcaccttct cggtgaccca gcggttgtag
     2401 gcccagcaaa gatccgactc catctccttc tgcggatgca tgccgatgtt gagcatgccg
     2461 gttgggaaca ggcaggagta atccacgctc atcgcgtcca tccagcgctc gccgagctgc
     2521 acgtcgcgat gcttgccgtc ctgctgcgtc ttttccgaac gccgcagcgg atagcgcgtc
     2581 acccgcccgc ccatgtcctg gatgaatccc gcattggtcg gcacgacggc gccgcggtcg
     2641 gtcatgccgc gaccgcccat cgtccactgg cggaaaacgt cgttttccat gtagggcaga
     2701 atgtcgttgt agtgctcgtt ctcgtaatgg tgggcatcca cgtcgacgat gagaacgtcg
     2761 tcgagcttgc gctgaaccgc ctgcttgcgc gcgtgcgcga gaagcctggt ggtattcagc
     2821 tcgtcgatcg atacgcgtcg gccgcgttca gcgaggaggt ccatcttcgt ctcctgacgt
     2881 ttccaaaacg gcttgctaat tccttgcggg cgcacccgcg ctcgaatcta acgcccggtc
     2941 caactctgcc acatgccgag ctcgaacacg gcgaggttgg cggctttgag caggccgctc
     3001 gccgtgatca tgacctcggt cgcggtggcg ccgccgcgct ggggaagcgg cagcacctgc
     3061 tcgcccgctt c
//
LOCUS       DATCWM010000055         3308 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_183997, whole genome shotgun sequence.
ACCESSION   DATCWM010000055 DATCWM010000000
VERSION     DATCWM010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3308
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183997"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(645..1832)
                     /locus_tag="VIQ50_01015"
     CDS             complement(645..1832)
                     /locus_tag="VIQ50_01015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018268884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
                     /protein_id="HEY9358984.1"
                     /translation="MRPALEVADIFRRHGEAYRHAHGAGMGRVERRVMSAIATCRTAA
                     LGGHVEQCTGCRAIRVSYNSCRNRHCPKCQGLARAEWLEARQAELLPVPYFHVVFTVP
                     APIAEIAFQNKAMVYDMLFQATAETLRTIAADPEHLGAEIGMLAVLHTWGQNLQHHPH
                     VHCVVPGGGPSPDGTRWVAARPCFFLPVRVLSALFRRLFLERLRAAFEADKLRFFGAL
                     LDLLQPAVFARRLAAWRRIDWVVYAKRPFGGPAQVLAYLGRYTHRVAIANSRLIQLEE
                     GRVSFRWRDYRQRGKTKVMTLATAEFIRRFLLHTLPDGFKRIRHYGLLANGHRAAKVA
                     LCRRLLAAPAPPTPQPIDYRERYRRLTGHSLDICPGCGGHMQSLGRLPPGDPVGSEWH
                     DTS"
     gene            complement(1842..2702)
                     /locus_tag="VIQ50_01020"
     CDS             complement(1842..2702)
                     /locus_tag="VIQ50_01020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007599989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEY9358985.1"
                     /translation="MAAMSPLRRRMIEDMTVRNLSPTTQRSYVHAVAKFSAYFGKSPD
                     RLDVEDVRAYQVHLASKGVAWASLNQVVCALRFFYGVTLGRPEMPERIAYAREPRKLP
                     VVLCVEEVVRFLEAVPGLKSRVALTTAYAAGLRVSEVIALQISDIDSKRMVIRIAHGK
                     GGKERYAMLSAQLLRILRGYWRLARPHPWLFPGRDPSHPIDQQVLHAACRSARQAAGL
                     AKHVTVHALRHSFATHLLESGADIRVIQVLLGHNNLSTTARYTHVSTGIIQKTTSPLD
                     RLDLEIVPPA"
     gene            complement(3037..>3308)
                     /locus_tag="VIQ50_01025"
     CDS             complement(3037..>3308)
                     /locus_tag="VIQ50_01025"
                     /inference="COORDINATES: protein motif:HMM:NF013920.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="OB-fold domain-containing protein"
                     /protein_id="HEY9358986.1"
                     /translation="DCLAAEAQWQPVSGRGKVFSFVVFHRAYHPAWEGKVPYNVALIE
                     LDEGPIMLSNVIATDDTKLAVGVPVAVAFERVDDSLSIPVFKPAQ"
BASE COUNT          631 a          978 c         1149 g          550 t
ORIGIN      
        1 ggcccgcacc atcaaccggg cgcgcacctt cctgaagcgg cacctgccgg cgtaagcccc
       61 gacgtattgt tttgtagacc gtggcccacg gagcgcttcc cttcgggcgg gccgcgcgtt
      121 tgcttcaatc atgctgcgcg ctgaggatag aatgaggggc cgcgttgctg cgattgctca
      181 cggccggttt tggcagatat tgttgcaaaa gtcgccgcgg cgccgctgtg gaattcaaat
      241 ttgaaacaat cgaatcggga catgcgcact cttgaatcag gagggttatg tgaggtcggg
      301 gaactatggt ggtcgcgagg cgcggccgtg gaggcgacct cacataagcc ggattgaact
      361 gaaccgccgg gcacggcgct atggggattg gatcggtgcg gcggggtgag gcgcgaggga
      421 tggtgagcgc catgggggat tgcgggtgag ccggagatcg gcggccctgc tggtgagagg
      481 ccttgatatg ggccgacgaa ctacggcgaa cggcgattcg agtgatgcct gcaccacgat
      541 cagggtcacg atgacacgtc cggcgaggtc agccgcgcgg tggctgtcgg cagaaggcgc
      601 tgtgagcccg aggggcgaga ggcggtcgga tcggcgatgc cgggtcatga cgtgtcgtgc
      661 cattcggagc cgactggatc gccgggaggc agccgaccga gcgattgcat gtggccgccg
      721 cagcctgggc agatgtcgag tgaatggccg gtgagccgcc gatatcgctc gcgatagtcg
      781 atcggctgtg gtgttggtgg agccggagcg gcgagtagcc tgcggcagag cgcgactttg
      841 gcggcgcggt gtccattggc gagcaagccg taatggcgga tgcgcttgaa gccatccggc
      901 agggtgtgca ggaggaagcg gcggatgaac tccgcggtgg caagcgtcat gaccttggtc
      961 ttgccgcgct ggcgatagtc gcgccagcgg aagctgacgc gaccctcttc aagctggatc
     1021 agccggctgt tggcgattgc gacacggtgc gtgtagcggc cgagataggc gagcacctgc
     1081 gcgggaccgc caaagggacg cttggcgtag accacccagt cgatgcggcg ccacgcggcc
     1141 agacgccgag cgaagaccgc cggctgcagc aagtcgagga gggcgccgaa gaaacggagc
     1201 ttgtcggcct cgaaggcagc tcgcagacgc tcgaggaaca gcctcctgaa cagagcggag
     1261 agcacacgga ccggaaggaa gaagcagggc cgggcggcga cccatcgggt tccgtcgggt
     1321 gacgggccgc cgccgggaac gacgcagtgg acatggggat gatgctgcag attttgtccc
     1381 caggtgtgca gcacggccag catgccgatc tcggcgccga ggtgctcggg atcggccgca
     1441 atggtgcgca gcgtctcggc cgtggcctgg aacagcatgt cgtacaccat ggccttgttc
     1501 tggaaggcga tctcggcgat cggagccggc acggtgaaga cgacgtggaa gtaagggacc
     1561 ggcagcagct cggcctggcg tgcctcgagc cattcggcgc gcgccagacc ttggcacttc
     1621 ggacaatgcc ggttgcgaca cgagttgtag gagacgcgga tcgctctaca gcccgtgcac
     1681 tgctcgacat ggccccccag agcggcggtc cggcatgtcg caatggcgct catcacgcgg
     1741 cgctcgacac ggcccatgcc ggcgccatgg gcgtgccggt aagcctcgcc atgacggcgg
     1801 aagatgtccg ccacctcgag cgcggggcgc acgtccgccg ctcaggccgg cgggactatc
     1861 tccagatcga ggcggtccag cgggctcgtc gtcttttgga tgatgccggt cgacacatgg
     1921 gtgtagcggg ccgtggtcga caggttgttg tggccgagaa ggacctggat cacgcggatg
     1981 tcggcaccgc tctccaacag atgggtggca aagctgtgtc gaagcgcgtg caccgtgacg
     2041 tgcttggcaa gccctgccgc ttgtctggcc gatcgacagg cggcgtgaag gacctgctga
     2101 tcgatcggat gcgacgggtc gcggccgggg aacagccacg gatgcgggcg ggccagacgc
     2161 cagtagccgc gtaggattcg cagaagctgc gccgacagca tggcatagcg ctccttgccg
     2221 cccttgccgt gcgcgatccg gatcaccatc cgcttgctgt cgatgtcgga gatctgcagc
     2281 gcaatgacct ccgagacgcg caggccggcg gcataggccg tggtcaatgc cacccggctc
     2341 ttcaggccgg gcacggcctc gagaaagcgc accacttcct cgacacagag aaccaccggc
     2401 agcttgcgcg gctcacgtgc gtaggcaatc cgctctggca tctcgggccg cccgagcgtc
     2461 accccataga aaaagcgcag cgcgcagacc acctggttga ggctcgccca ggccacgccc
     2521 ttcgacgcca ggtggacctg ataggcgcga acgtcctcca catcgagccg atccggtgac
     2581 ttgccgaaat atgcgctaaa cttcgctacc gcgtgcacgt aagatcgctg cgtcgtcgga
     2641 gacagattgc ggaccgtcat gtcctcgatc atccggcgac ggagagggct catcgcagcc
     2701 atcgggttct cctgtctgag gggtgggctt gcacaaccca aatcctctca gacgggggac
     2761 cttcggcgct accgcatccc ataccgcgca gcggtttagt tcaatcgccc gagagtcaaa
     2821 atttcaggga cccggtatta aaccttgtta atgaatattc attaattcat gtaatactgg
     2881 agaaataaag cgacacataa tgaaataaac tatgaaacac atttcgagga ctatgtcgcg
     2941 ggaagggtcg cgcgcaacaa tcacacgcag cgggttcgca agatgcgtgg ctttcggcac
     3001 gcagcgccgg cccgaataca gcaacgacct gaacggctat tgcgccggct tgaacacggg
     3061 gatgctcaaa ctgtcatcca cgcgctcgaa ggcgaccgcg acgggaacgc cgacggcgag
     3121 cttggtgtcg tcggtcgcga tcacgttgct gagcatgatc ggtccttcgt cgagctcgat
     3181 cagcgcgacg ttgtagggga ccttgccctc ccaggcggga tgataggcgc ggtgaaacac
     3241 cacgaaggaa aacaccttgc cgcgcccgct caccggctgc cattgcgcct cggcggcgag
     3301 acagtccg
//
LOCUS       DATCWM010000056         2508 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_318951, whole genome shotgun sequence.
ACCESSION   DATCWM010000056 DATCWM010000000
VERSION     DATCWM010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2508
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_318951"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..181
                     /locus_tag="VIQ50_01030"
     CDS             <1..181
                     /locus_tag="VIQ50_01030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9358987.1"
                     /translation="NGAAPFPSANAFGAATVAVGKYSSHALRKQGDNRALGKFRAELL
                     HCGYTSRVTSPAMTR"
     gene            230..463
                     /locus_tag="VIQ50_01035"
     CDS             230..463
                     /locus_tag="VIQ50_01035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9358988.1"
                     /translation="MDSSEDAAYARAALSTTVVLFRTLLKKGLITREEAVRIILDEAV
                     SKAIQAEAQDQGRAGSEADRRCAEILKLIAERL"
     gene            complement(584..1927)
                     /gene="pcaB"
                     /locus_tag="VIQ50_01040"
     CDS             complement(584..1927)
                     /gene="pcaB"
                     /locus_tag="VIQ50_01040"
                     /EC_number="5.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047472 - 3-carboxy-cis,cis-muconate
                     cycloisomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-carboxy-cis,cis-muconate cycloisomerase"
                     /protein_id="HEY9358989.1"
                     /translation="MPTSAIDSVIFRDIFGSPAMREVWSDRFRTQKYLDWEAALARAE
                     AKVGLIPREAADEITRVCKVENIDFEAYAKETVTIGYPVLGLVHQIAHLCRGDAGNYC
                     HWGATTQDITDSATILQIKASFDLIAKDLDRAIAATEKLARKHRSTPMPARSNLQQAV
                     PITFGFKMARLLATLKRHRARLAEIRPRIEVFEFGGAAGTLATLGEKGLAVQEALARE
                     LGLAQPDIAWHTERDRIAEAGCFLGLLTGTLAKFATDLKLMMQTEVGEASEPYAANRG
                     SSSTMPQKRNPISCCYIHACAASVRQGVAALLDAMVEDHERSTGPWEIEWITLPDIFT
                     LAGGALAQACFVLDGLEVDADRMRANLDATRGLIVSEAVMMGLAPKMGRDKAHDVLYA
                     IIHDPAMGNKSLAEMLLAREDVMADLSETEIRRLTDPTNYLGLSETMVDRVLGST"
     gene            complement(1991..>2508)
                     /locus_tag="VIQ50_01045"
     CDS             complement(1991..>2508)
                     /locus_tag="VIQ50_01045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008836973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY9358990.1"
                     /translation="AAPHWRARNGFGWVAQEREIFPSLSVEENLLIAARPGRWDLAAV
                     YGLFPRLRERRGSRGNHLSGGEQQMLAIARALMTNPRLLLLDEPLEGLAPIIVEELTA
                     AIRRMTADEGTAFVLVEQHAEVALSLSADAIVLERGSIVHRARSQDLLKDEATLERLI
                     GLRLAEEAGAG"
BASE COUNT          429 a          846 c          790 g          443 t
ORIGIN      
        1 caacggtgcc gcacctttcc cctccgcaaa cgccttcggc gcggcgaccg tggccgtcgg
       61 caagtattcc tcccacgcgc tgcgcaaaca aggggataac cgcgccctcg gcaaattccg
      121 tgctgaactg ttgcattgcg gttacacatc tagggtgaca agtccggcca tgacgcgcta
      181 ggcagagctg atagacctgc tgcgccttca agcatcgcga gaacacgaca tggattcctc
      241 cgaagatgcg gcctatgcgc gggcggcgtt gagcacgacc gtcgtgttgt tccgcacgct
      301 gctcaaaaag ggcctgatta cccgcgagga ggccgtgcgc atcattctcg acgaagcggt
      361 atcgaaagcc atccaggccg aagcccagga tcaagggcgg gccggcagcg aggcggaccg
      421 ccgatgcgcg gagatcctga agttgattgc ggaacggctt tgaccgagtt ttggtccgtg
      481 agcagacatc agctcgacgg tcgtccgtgc tcgactcgcg cccctacatt attcggcgtc
      541 gcgcgatcat cccgctgcaa ataggccacc agagccctgc ccgttacgtg cttcccagca
      601 cccggtcgac catcgtctcc gagagcccga gatagtttgt ggggtcggtc agcctcctga
      661 tctccgtctc ggacagatcc gccatcacat cctcacgcgc gagcagcatc tcggcgagac
      721 tcttgttgcc catggcaggg tcgtggatga ttgcgtagag gacgtcgtgc gccttgtccc
      781 gacccatctt gggagcgagc cccatcatca ccgcctccga gacgatgagt ccgcgcgtcg
      841 catcgagatt ggcgcgcatg cggtcggcgt ccacctcaag tccgtcgagc acgaagcagg
      901 cctgcgccaa ggcgccgccc gcaagcgtga aaatatcggg caacgtgatc cactcgatct
      961 cccacggccc ggtggaacgc tcatggtctt ccaccattgc gtcgagcagc gccgccaccc
     1021 cctgccgcac cgatgcggcg caggcgtgga tgtagcaaca cgagatcggg ttgcgcttct
     1081 gcggcatggt cgaggacgaa cctcggttgg cggcgtaggg ctcgctcgcc tcgccaacct
     1141 cggtctgcat catcagcttg aggtcggtgg caaatttggc gagcgtgccg gtgagcagcc
     1201 cgaggaagca gcccgcctcg gcgatgcggt cgcgctcggt atgccaggcg atgtcgggct
     1261 gcgcgaggcc gagctcgcgc gccaatgcct cctgcaccgc cagacccttc tcgccgaggg
     1321 tagcaagtgt gccggcggcg ccgccaaact cgaacacctc gatgcgcggc cggatctcgg
     1381 cgagccgcgc gcgatggcgc ttcagagtgg cgagcaggcg cgccatcttg aagccgaagg
     1441 tgatcggcac cgcctgctgc agattcgagc gcgccggcat tggcgtcgag cgatgtttgc
     1501 gagcgagctt ttcggtcgcc gcaatcgcgc ggtcgaggtc cttggcgatc aggtcgaacg
     1561 acgccttgat ctgcaggatg gtggcggaat ccgtgatgtc ctgggtggtg gccccccagt
     1621 ggcagtagtt gccggcatcc ccccggcaca gatgcgcaat ctggtggacg aggccgagca
     1681 ccggatagcc gattgtcacc gtctccttgg cgtatgcctc gaagtcgatg ttctcgacct
     1741 tgcatacacg ggtgatctca tcggccgctt ctcgcgggat caggccgacc ttggcctcgg
     1801 cgcgggcgag cgccgcttcc cagtcgaggt acttctgggt gcggaaccgg tccgaccaca
     1861 cctcgcgcat cgccggcgag ccgaagatgt cgcgaaagat cacgctgtcg atggcgctgg
     1921 tgggcatcag agatctcctt tcgatcattt cgcgtcgtgc cgcgccggcg gcctcatcgc
     1981 cgtgaagcct tcaacccgcg cccgcctcct ccgccaggcg cagtccaatc aagcgctcga
     2041 gcgtcgcctc atcctttagc aagtcttgcg agcgcgcgcg gtgcacgatg ctgccccgct
     2101 ccagcacgat cgcatcggca ctcaacgata gggcgacttc cgcatgttgt tctaccaaaa
     2161 cgaaggcggt tccttcatcg gcggtcatgc gccggatcgc cgccgtcagc tcctcgacga
     2221 tgatcggcgc caacccctcg agcggctcgt cgagcaagag aagtctcggg ttcgtcatca
     2281 gcgcgcgcgc gatcgccaac atctgctgct cgccgccgga aaggtggttg ccgcggctcc
     2341 ctcgccgctc gcgcagccgg ggaaacaagc catagaccgc cgcgaggtcc cagcgcccgg
     2401 gccgcgccgc aatcagcagg ttttcttcga cgctgagcga ggggaaaatt tcccgctcct
     2461 gcgcgaccca gccgaacccg ttgcgcgcgc gccaatgcgg cgcggccc
//
LOCUS       DATCWM010000057         2291 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_22002, whole genome shotgun sequence.
ACCESSION   DATCWM010000057 DATCWM010000000
VERSION     DATCWM010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2291)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2291)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2291
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22002"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..830)
                     /locus_tag="VIQ50_01050"
     CDS             complement(<1..830)
                     /locus_tag="VIQ50_01050"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0046417 - chorismate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HEY9358991.1"
                     /translation="MGKPSQSEALSLAELRREIDRIDEAMHRLLMERGEIIDRLIATK
                     QTQETGSAFRPAREADMMRRLVDRHKGILPLDTAESIWRVIISTFTYVQAPFSVHADL
                     SAGDAAMRDSARFHFGFTVPFVPHADAASVVAAVSDSRGDLGLVPAFGTAGTGAWWSA
                     LESDSAPKIIARLPFVERADHPAGVPVFVVSRAAADAMVRDVEVWSVRLAGWSSAAAE
                     AVAPLAEVIAVPDRGFDSAALLISVPQGGRIERVTDTLVKAGASVRTAALVGSHATRY
                     "
     gene            1027..2223
                     /locus_tag="VIQ50_01055"
     CDS             1027..2223
                     /locus_tag="VIQ50_01055"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006018830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HEY9358992.1"
                     /translation="MVEADFSVAFDPADRAREADNPHSLVVRFGMDKPLALDAGIDLA
                     PFQIGYQTYGALNAERSNAVLICHALTGDQHVANLHPVTQKPGWWETMVGPGRPIDTE
                     RYFVISPNVVGGCMGTTGPASTNPKTGMPWGLDFPVITIRDMVRAQAMLLDHLGIASL
                     FSMAGGSMGGMQVLQWCASYPQRVFSALPIASSTRHSAQNIAFHEVGRQAVMADPEWR
                     HGRYFAEGTNPRRGLAVARMGNHITYLSDAALHRKFGRRFQDRDNPTFSFDADFQVES
                     YLRHQGISFVERFDANSYLYLTRAMDYFDLAADYDGVLANAFKDTPTRFCVTSFTSDW
                     LFPTSDSRAIVHALNAGGARVSFAEIVTDKGHDAFLLEEPELFAIVRGFLEGAAKARG
                     LPPARR"
BASE COUNT          395 a          760 c          720 g          416 t
ORIGIN      
        1 ctatagcggg ttgcgtggct tccgacgagg gcagcggtgc gcacggaggc gccggccttc
       61 accagcgtgt cggtcacccg ctcgatgcgg ccgccctgcg gcaccgatat cagcaacgct
      121 gcgctgtcga agccacgatc cggcacggcg atcacctcgg ccaacggggc gacggcctcc
      181 gccgccgcgc tactccagcc ggcaaggcgc acgctccaca cttcaacgtc cctgaccatg
      241 gcatcggccg cggcccgcga caccacgaat accggcacgc ccgccggatg gtcggcgcgt
      301 tcgacgaagg gcaagcgggc gatgatctta ggcgcggaat cggattcgag cgcgctccac
      361 caggcgccgg tgccggccgt gccgaaggcg ggcaccaatc caagatcacc cctggagtcg
      421 gacacggccg ccaccacgct cgccgcgtcc gcgtgcggga caaacggcac cgtaaagccg
      481 aaatggaacc gagcggaatc gcgcatcgcc gcgtctcccg ccgacaggtc ggcgtgaacc
      541 gaaaacggcg cctgcacata ggtgaacgtc gaaatgatga cccgccagat gctctcagcg
      601 gtgtcgagcg gcaggattcc tttgtggcgg tcaaccaacc gtcgcatcat gtccgcctcg
      661 cgcgccgggc ggaacgcgga gccggtttcc tgcgtctgct tggtggcgat caggcgatcg
      721 atgatctcgc cgcgctccat taggagcctg tgcatcgctt cgtcgatgcg gtcgatttct
      781 cgccgcagtt cggcaagcga tagtgcttca gactgggacg gttttcccat ggcgcgtctt
      841 cgtcgcctcc tcgcgcccgc gtctcgaggg gatgtgggcg tggcattgat aggtggggca
      901 atgggttaaa gcaaagaaaa cattgacagc cccgccctgc ggcctatcta agccgatcgc
      961 agcggcccac cttcaggcgg tcgcataatt cggcggctgt ttcgcatcgc cggccgggtc
     1021 gcaaccatgg tcgaagccga tttcagtgtc gcatttgatc ccgccgaccg cgcgcgcgag
     1081 gctgacaatc cgcattcgct cgttgtgcgc ttcggcatgg acaagccact ggcacttgat
     1141 gccggcatcg atcttgctcc attccagatc ggctatcaga cctatggcgc gctcaatgcc
     1201 gagcgcagca acgcggtgct gatctgccac gcgctcacgg gcgaccagca tgtcgccaat
     1261 ctgcatccgg tgacacagaa gcccggctgg tgggaaacta tggttggccc tggacggcca
     1321 atcgataccg agcgctattt cgtcatttcc cccaacgtgg ttggcggctg catgggcacg
     1381 actggaccag cctccaccaa cccgaagacc ggcatgccct ggggtctcga tttccccgtc
     1441 atcaccattc gcgacatggt gcgcgcgcag gcaatgctac tcgaccatct cggcatcgcg
     1501 tcgctgttct ccatggcggg tggctcgatg ggcggaatgc aggtgttgca atggtgcgcg
     1561 agctatccgc agcgggtatt ctcggcgctg ccgatcgcga gctcgacccg ccactcggcg
     1621 caaaacatcg ccttccacga ggtcggccgc caggcggtga tggcagaccc ggaatggagg
     1681 cacgggcgtt atttcgccga gggcaccaat ccgcggcgag ggctcgccgt cgcgcgcatg
     1741 ggcaaccaca tcacctatct ctccgacgca gccttgcacc gcaaattcgg tcgccgattc
     1801 caggaccgtg ataatccgac gttctctttc gacgctgatt tccaagtaga gagctatctg
     1861 cgtcaccagg ggatcagttt cgtcgagcgc ttcgacgcga attcctacct ctacctgacg
     1921 cgcgcgatgg actatttcga cctcgcggcg gactatgacg gggtgctcgc caacgccttc
     1981 aaggatacgc cgacgcggtt ttgcgtgacc tcctttacct cggactggct ttttccgact
     2041 tcggactcgc gcgccatcgt gcacgcgctc aacgcgggcg gtgcgcgtgt ttcgttcgcc
     2101 gagatcgtga cggacaaggg tcacgacgcc tttctactcg aggagccgga gctgttcgcc
     2161 atcgtgcgcg ggttcctcga gggagcggcc aaggcgcgcg gccttcctcc cgcacggcga
     2221 tgacgatgct gatgcgtttc aagcgcgatt tgaccatggc agaggcagcg cgcgagcgcg
     2281 gcggtgcgcg c
//
LOCUS       DATCWM010000058         8013 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_173218, whole genome shotgun sequence.
ACCESSION   DATCWM010000058 DATCWM010000000
VERSION     DATCWM010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8013
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173218"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..582
                     /locus_tag="VIQ50_01060"
     CDS             <1..582
                     /locus_tag="VIQ50_01060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9358993.1"
                     /translation="LVAVRSSYETFKGNREGAIFHSWAQLRSRPDLAAFERMEESLRQ
                     LDSGKNWALLPFFLGCAAELRGGYGYAPAAVALLDRATELVGITGERWCEAEIMRLRA
                     RFGGSEQAVPLLEASLATAREQGAKLWELRTATTLAGVLRDQGHSAEAEEVLAPIYAS
                     FTEGWATADLVTARELLDEVGGQAGRPRFRFSS"
     gene            711..1613
                     /locus_tag="VIQ50_01065"
     CDS             711..1613
                     /locus_tag="VIQ50_01065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012453876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEY9358994.1"
                     /translation="MLKLPGHSRYAYSPIVERKDYNWPEGKRLAFYVALNIEHFAFGA
                     GLGMDPVRSAQQTTRNFAWRDYGNRIGNWRLFEILDELKLPATILLNSSVCYHYPQIV
                     EKIKARGDDVLGHGRTNAELLRGMWEHDEARAIEECTEVIAKHVGVRPTGWMGPGALE
                     SNVTPDLLKEAGYTHLLDWPVDDQPIWMQTRSGPLLSVPYPMELNDAGAQAHRDHTGR
                     EFGEMIVDQFEEMLEQSQRQPLVFALSLHGFIVGQPFRLRPVRQAIKHCVEHKHKDRV
                     WYTRAGDIAKYCFSLPKGLIPGSQ"
     gene            1693..2787
                     /locus_tag="VIQ50_01070"
     CDS             1693..2787
                     /locus_tag="VIQ50_01070"
                     /inference="COORDINATES: protein motif:HMM:TIGR02714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ring-opening amidohydrolase"
                     /protein_id="HEY9358995.1"
                     /translation="MAVEVAKVELKTVQDASGLEACIARGQFVADEVIAVIGKTEGNG
                     GVNDFTRILADQAFRRALQKHGKRSEAEIAAIPMVWSGGCDGVITPHATIFAHNAKRG
                     AASKSRLAIGTAISAELLPEDIGRPAMVEKVAAAVKAAMRHAGIDDPSDVHYVQTKTP
                     LLTIESVREAQSRGHDVACEVHDSMGVSNGTAALGIALALGEIKLPRAEQVCRDLDLY
                     SSVASCSSGVELTQAQVVLIGNKAGAGGRYRAGHALMRDALDIDGIYDAVRNAGLELP
                     TRPRAEDLEGRLVNCFIKCEADRRGTLRGRRQIMLDDSDVHHHRHAKAAVGGVAAAAI
                     GDPAVFVSVDAMHQGPQGGGPVIAIIDAGE"
     gene            2944..3777
                     /locus_tag="VIQ50_01075"
     CDS             2944..3777
                     /locus_tag="VIQ50_01075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY9358996.1"
                     /translation="MARESPVARAKEDRAPTGAAGAKSAPSAHVTIRGLTKHFPDAIL
                     YDRFDLDIPRGKLLSIFGPNGCGKSTLINMITGLIPTDAGEILFDGKPLRDIKFGYVF
                     QNYREALFPWLRAIDNIQYPLKLMKLPKAERRMRTERMVSSLGVKVDLNRYPYELSGG
                     QQQLVSILRALVVEPQILFLDEPFSALDYEMTLFMRDQLQRIFVETGTTTVLVSHDLE
                     EAVYLADRILLLSRRPASIADYVHYDAARPRTDATLSQHDFVRVKAHCLEVFQREVRK
                     G"
     gene            3774..4535
                     /locus_tag="VIQ50_01080"
     CDS             3774..4535
                     /locus_tag="VIQ50_01080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9358997.1"
                     /translation="MKAGRFDPYLPMIGVVGLIVIWYMAVWYQVVDPVLLPSPIDTFR
                     ALWNGMVGGRLGFDFLRTLERTIFAILIAAAIAIPLGIALGASERIYRSVEFVIDFFR
                     STPASAMFPLFLVLFGVGDQTKISVAAFGAALVILFNVAYGVMHARKTRLLAAKVMGA
                     SRLRVLTDVMLLESLPQTFVGLRNGVSLALVIVVVAEMFIGSTDGLGQRVFEAQQLFA
                     MPDMYAAIFAAGGLGYGLNLTFLLVERQFVHWSGK"
     gene            complement(4718..5698)
                     /locus_tag="VIQ50_01085"
     CDS             complement(4718..5698)
                     /locus_tag="VIQ50_01085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018458943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9358998.1"
                     /translation="MRRSRLLHVAAAAVGLFAAPVTASAQAYPTRPIQVIVPFAGGSA
                     SDVVMRILLDRMAKSIGQPFIVDNRPGAGGNIGTIAGTKATPDGYTLVMGSTGPMAAN
                     RTLYRDLGYDPDRDLEPISLFAHFPILVVVSSKLPVTSLSEFVAYAKARPKQLNYGSV
                     GIGSSQHLSGIYFEQVTGLELTHVPYRNIAQYVPDLIAGAVPVGFQWLPNVSAGLQTG
                     EAKALAVAASTRMTALPDVPTVAEAGINNYESSGWLALLAPHATPKPIIAKLNEELVA
                     AVKDPQVAHKIVEQGAEGVSTTPEELAKFIASESKKWREIIVKAGIPPIQ"
     gene            5856..7259
                     /locus_tag="VIQ50_01090"
     CDS             5856..7259
                     /locus_tag="VIQ50_01090"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HEY9358999.1"
                     /translation="MKRNLDDDSQSLRGFLRLVETEYPDELLRVREPIDLRFDAAALV
                     FELDHAGKSPVVVFENVRGNGMQLVTNVAGNRKLLAACLGVDPADLPTAFRERCQKYI
                     ACEVVDRGAWEDLVLEGDDVDLTKLPIPLQFKVDAAPYITAGQIVARDPVSGVDTTGF
                     HRLMLKGKNRLGVSLHSRRRLYEFHRRAEERGQALPAAITLGTHPLHYMGSMVYAYPP
                     HVRKFEIIGGLFGEPYRLARCGVADLEVPAGAEIIIEGEILPNVHEPEGPFSEFTGYA
                     SYRSTQNVFVAHRIRMRRDAMFHSVTSGMSRDHIQVSCITREGEILNALRRNLPNVRA
                     VHVPHTTCGAFMAFISMKKIAEGEPQMAIMAALGTELYTKYVIVVDDDVDIFNINDVM
                     WAVATRVRAEKDIMFIPGAKGAILDPTSDPENFTLTKMGIDATRPAGREFAERLTIPD
                     DQRARARSILAAAGVKL"
     gene            7351..>8013
                     /locus_tag="VIQ50_01095"
     CDS             7351..>8013
                     /locus_tag="VIQ50_01095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009337077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0006797 - polyphosphate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PPK2 family polyphosphate kinase"
                     /protein_id="HEY9359000.1"
                     /translation="MPRKELLDSIRKYVHPFRISKGKGFRLKDFDPGDTCGLKLGKKE
                     AADLLQHGIAGLAEEQDMLYARDSWSLLLIFQAMDAAGKDSTIKHVMSGINPQGCQVF
                     SFKQPSSEDLDHDFLWRYVKCLPERGRIGIFNRSYYEEVLVVRVHPEILAKQKLPEGS
                     VGKRIWDERLADIANFEDYLTRQGTLILKFFLHVSRDEQKKRFMGRLNTPEKSWKFAL
                     ADI"
BASE COUNT         1461 a         2539 c         2519 g         1494 t
ORIGIN      
        1 cttgtcgcgg ttcgcagttc gtatgaaaca ttcaagggca atcgggaggg cgcgattttt
       61 catagctggg cgcaacttcg ttcgcggcca gacttggccg cttttgaacg catggaagag
      121 tctctgcgcc agctcgactc cggaaaaaat tgggcgctgc tgccgttttt tcttggctgc
      181 gccgccgaac tgcggggtgg ctacggctat gcgccggccg ccgttgcctt gctcgaccga
      241 gcaactgaac tcgttggcat caccggtgag cggtggtgtg aggcggagat catgcgtctt
      301 cgggctcgct tcggcgggag cgagcaggcg gtgcccctgc tggaggctag ccttgcaacc
      361 gcgagggagc agggcgccaa gctgtgggaa ttgcggacgg caactactct agccggcgta
      421 ttgcgcgacc aggggcacag cgccgaggcg gaggaggtgt tggcgccgat ctacgcttcg
      481 tttacggaag gatgggcaac ggcagacctc gtcaccgctc gggaactgct cgatgaggtc
      541 gggggacaag ccggtcgccc acgatttcgc ttctccagct agtcttgcgt ttatggcagc
      601 gcatgttggt atggttcgtc gccgccggct agagtagtcg gcatccgcaa tggcccgacc
      661 agccctcccc tcatccgcgc caatattccg agccaccacg gagcacaccc atgctgaaac
      721 ttcccggcca tagccgatac gcctattcgc ccatcgtcga gcggaaagac tacaactggc
      781 cggaaggcaa gcggctcgcc ttctacgtcg cgcttaatat cgagcatttc gcgttcggcg
      841 ccgggctggg gatggatccg gtccgcagcg cccagcagac cacgcgcaac ttcgcctggc
      901 gcgactacgg caaccggatc ggcaactggc ggctgttcga gatcctcgac gagctcaagc
      961 tgcccgccac catccttttg aacagcagcg tctgctacca ctacccgcag atcgtggaaa
     1021 agatcaaagc ccgcggcgac gacgtgctcg gccacggccg caccaatgcc gagctgctgc
     1081 gcggaatgtg ggagcatgac gaggcgcgtg cgattgagga atgcaccgag gttatcgcaa
     1141 aacacgtcgg cgtgcggcct acaggatgga tgggccctgg cgcgctcgag tccaacgtca
     1201 cgccggatct gctcaaagag gctggctata cccacttgct cgattggccg gtcgacgacc
     1261 agccgatctg gatgcaaacg cgctccggac cgttgctgtc cgtcccttat ccgatggaat
     1321 tgaacgacgc aggtgcgcag gcgcatcgcg atcacactgg ccgcgaattc ggcgagatga
     1381 tcgtcgatca gttcgaggag atgctggagc agtcgcagcg ccagccgctt gtctttgcgc
     1441 tgtcgctgca cggcttcatc gtggggcagc cgttccgctt gcgtccggta cgccaagcca
     1501 taaagcattg cgtcgagcac aagcacaagg atcgggtctg gtacacccgc gccggcgaca
     1561 tcgcgaaata ctgcttctcg ctgccgaaag gccttattcc gggcagtcag tgagtcatac
     1621 cggcgcccct gcaaatcctg atccggggct aatgcgggcc gcgcatgcgc gaagcaacgt
     1681 gaaggagtga agatggcggt agaggtcgca aaggttgagc tcaagaccgt gcaggatgcc
     1741 tccgggctcg aggcatgcat tgcccgtggg cagttcgtcg cggacgaggt gatcgcggtt
     1801 atcggcaaga ccgaaggcaa cggcggcgtg aacgatttca cgcgcattct ggccgaccag
     1861 gcctttcgtc gggcactgca aaagcacggc aagcgcagcg aggcggagat cgccgccatc
     1921 ccgatggtct ggtcaggcgg ctgcgacggc gtcattacgc cgcacgcgac tatctttgcc
     1981 cataacgcca agcgcggcgc ggcatcgaag tcacgcctcg cgatcggaac cgcgataagc
     2041 gccgaactct tgcccgagga tatcggccgg ccggcgatgg tggagaaggt tgccgccgcc
     2101 gtgaaagcgg cgatgcggca cgccggcatc gacgatccga gcgacgtgca ttacgtgcag
     2161 accaagacgc ccctgctcac catcgaatcc gtccgcgagg cgcaatcgcg cggccacgac
     2221 gtcgcctgcg aggttcacga ctcgatgggc gtctccaacg gcacggccgc gctcggcatc
     2281 gcgctcgcgc tcggcgagat caaactgccg cgcgccgagc aggtctgcag agatctcgat
     2341 ctttactcct cggtcgcgtc gtgctcctcg ggcgtcgagc tcacccaggc gcaggtcgtg
     2401 ctcatcggca acaaggccgg cgccggcggc cgctatcgcg ctggccatgc gctaatgcgc
     2461 gatgccctcg atatcgacgg catttacgat gccgttcgca atgccggcct cgaactgccg
     2521 acgcgcccgc gcgcggagga tctcgagggc cggctggtga actgcttcat caaatgcgag
     2581 gccgatcgcc gcggtacgct gcgcggacgc cgccagatca tgctcgacga ctccgatgtg
     2641 catcatcacc gccatgccaa agccgcggtc ggcggcgtgg cggcagcggc catcggcgat
     2701 ccggcggtgt tcgtgtcggt cgatgcgatg catcagggcc cgcaaggcgg cggcccggtc
     2761 attgccatca tcgatgcggg agagtagtgc ccgcagcggg tccgtgctgg ccggcacgtc
     2821 gcttgcttgc tggtgggcac gcaaagcatg gagacggcaa gatgagcaaa tatggatacc
     2881 ggcacgctca gcgagaaggt tgacgtgacc aaacatctgc agacgttctg aaggattatc
     2941 gccgtggcgc gggaaagccc ggtcgcgcgg gcgaaggagg accgagcgcc gacgggcgcc
     3001 gccggcgcga agtccgcgcc atccgctcac gtcaccattc gcggcctgac caagcatttc
     3061 cccgacgcca tcctctacga ccgcttcgac ctcgacatcc cgcgcgggaa gcttctctcg
     3121 atcttcggcc ccaacggctg cggcaagagc acactgatca atatgatcac cggtttgatc
     3181 ccgaccgacg ccggagaaat tctgttcgac ggtaagccgc ttcgcgacat caagttcggc
     3241 tacgtgttcc agaactatcg cgaggcgctg tttccctggc tgcgggcgat cgacaacatc
     3301 cagtatccgc tcaagctgat gaagctaccg aaggccgagc ggcgcatgcg cacggagcgc
     3361 atggtctcga gcctcggcgt caaggtcgac ctcaaccgat atccttatga gctctccggc
     3421 ggccagcagc agctggtctc gatcctgcgc gcgctggtcg tcgagccgca aatcctgttt
     3481 ctcgacgagc cattctcggc gctggattac gagatgacgc tgttcatgcg cgaccagctg
     3541 cagcgcatct tcgtcgagac cggcacgacg accgtgctcg tctcgcacga tctcgaggag
     3601 gccgtctacc tcgccgaccg catcctcctg ctctcgcgcc gcccggcatc gatcgccgat
     3661 tacgtgcatt acgacgccgc gcggccgcgc accgacgcga cgctgtcgca gcacgacttc
     3721 gtccgggtga aggcgcactg cctcgaggtg ttccagcgag aggtccgcaa gggatgaaag
     3781 cgggccgttt cgatccttac cttccaatga tcggcgtcgt cggcctcatc gtcatttggt
     3841 atatggccgt gtggtaccag gtggtcgatc ccgttctgtt gccctcgccc atcgatacct
     3901 tccgcgcgct gtggaatggc atggtcggcg gccggcttgg cttcgatttc ctgcgcacgc
     3961 tggaacgcac catcttcgcc atcctgatcg cggcggcgat cgccatcccg ctcggcatcg
     4021 cgctgggcgc ctctgaaagg atctatcgat cggtcgagtt cgtcatcgat ttcttccgct
     4081 ccacgccggc gtccgccatg ttcccgttgt tcctggtgct attcggggtc ggcgaccaaa
     4141 ccaagatttc ggtcgcggct ttcggcgcgg cgctcgtcat tctgttcaac gtcgcttatg
     4201 gcgtgatgca cgcccgcaag acgcggctgt tggcggccaa ggtgatgggt gcatcgcgcc
     4261 tgcgcgtgct cacggatgtg atgctgctcg aatcgctacc gcagaccttt gttggattgc
     4321 gcaacggggt gtcgctagcg ctggtgatcg tggtcgtggc ggagatgttc atcggctcga
     4381 cggatgggct gggccagcgc gtgttcgagg cacagcaact gttcgccatg cccgatatgt
     4441 acgcggcgat ctttgccgcc ggggggctcg gctacggcct caatctcacg tttctgttgg
     4501 tcgagcgcca attcgttcac tggtcgggaa agtaaagggc gatggccgac ttcgaggagc
     4561 cgcgcatcct ctcgatggcc aagctcccag gcggcgcatc cggtcggctg accgtcgggt
     4621 atttgagacg acagtatccg gccctctccg ctagtaattc gtcatgcccg cccggccatg
     4681 acggcgcgaa tgggtcagtc caatccagag gggaccgcta ctgaatcgga gggatccctg
     4741 ccttgacgat gatctcgcgc catttcttcg attccgacgc gatgaacttg gcgagctcct
     4801 ccggggtcgt cgaaacgcct tccgccccct gctcgacgat cttgtgggcg acctgcggat
     4861 ccttgactgc cgcgaccagc tcctcattga gcttggcgat gatcggcttg ggcgtcgcgt
     4921 gcggggccaa cagcgcgagc catcccgagg attcgtagtt attgatgccc gcctccgcga
     4981 cggtgggaac gtcgggaagc gcggtcatgc gcgtgctcgc cgccacggcc agcgccttgg
     5041 cctcgccggt ctgcagcccc gcgctcacgt tcggcagcca ctggaacccg accggcaccg
     5101 cgcccgcgat caaatccggc acatattgcg cgatgttgcg gtagggcaca tgcgtcagct
     5161 cgagtcccgt gacttgctcg aaatatatcc ccgagagatg ttgcgagctg ccgatgccga
     5221 ccgagccgta gttgagctgt ttcggtcgcg ccttcgcata ggcgacgaat tcgctcaacg
     5281 aggtcaccgg cagcttggag ctcacgacga ccagaatggg gaaatgcgcg aatagcgaaa
     5341 tgggctccaa atccctgtcc gggtcgtagc cgagatcgcg gtaaagcgtt cggttggcgg
     5401 ccatcggacc ggtcgagccc atcaccagcg tgtagccgtc gggtgtggcc ttagtccccg
     5461 cgatggtgcc gatattgccg ccggcgcccg gccggttgtc gacgatgaag ggttgcccga
     5521 tcgacttcgc catccggtcg agcagaatgc gcatgaccac gtcgctggcg ctgccgccgg
     5581 cgaacgggac gatcacttgg atcggccgcg tcggatacgc ttgcgccgat gccgtcaccg
     5641 gtgctgcaaa tagcccgacc gcggctgcgg ccacatgtag aaggcgcgaa cgtcgcatgg
     5701 atttccctcg taaggctccc atgcgttcaa gcgcaattga cctatccgtt caagccgatt
     5761 ctttgtcgca atgctgccct ctggagaggc aatcttctcg ttcacgcgaa gcgcgtatac
     5821 gatgacacgc ccttagggcc gagctgggga cggtggtgaa acgaaacctc gatgacgaca
     5881 gtcaaagcct ccgcgggttc ttgcggctgg tggagacgga atatccggac gaattgctgc
     5941 gcgtacgaga gccgatcgac ctgcgtttcg acgccgcggc tttggtgttc gagctcgatc
     6001 acgccggcaa gagcccggtt gtcgtgttcg agaacgtccg cggcaacggc atgcagctcg
     6061 tcaccaacgt cgccggcaat cgcaagctgt tggcggcctg tctcggggta gaccctgccg
     6121 atctgcctac tgcgttccgc gaacgctgcc aaaagtacat cgcctgcgag gtcgtcgacc
     6181 gcggcgcctg ggaagatctg gtgctcgaag gcgatgacgt cgacctcacc aaattgccga
     6241 tcccgctgca gttcaaggtc gatgccgccc cctacatcac cgccggtcag atcgtcgcgc
     6301 gcgacccggt gagcggcgtc gacacgaccg ggtttcaccg ccttatgctc aagggcaaga
     6361 atcgcctcgg cgtgtcgttg cattcgcgcc gccgccttta tgaattccac cgccgcgccg
     6421 aggagcgcgg gcaagcgctg cccgccgcca tcacgctggg gacccatccg ctgcactaca
     6481 tggggtcgat ggtctacgcc tatccgccgc acgtgcgaaa gttcgagatc atcggcggtt
     6541 tgttcgggga accataccgg ctcgcccgct gcggcgtcgc cgatctcgaa gtgcccgccg
     6601 gcgccgagat catcatcgag ggcgaaatcc tgcccaacgt gcacgagccc gaaggtccgt
     6661 tcagcgaatt caccggctat gcctcctacc gcagcacgca gaacgttttc gtcgcgcatc
     6721 gcattcgcat gcgccgcgac gccatgttcc acagcgtcac ctcgggcatg tcacgggatc
     6781 acatccaggt gtcctgcatc acccgcgaag gtgaaatcct caacgcgcta cggcgcaatt
     6841 taccgaacgt gcgcgcggtg cacgtgccgc acacgacgtg cggcgcgttc atggcgttca
     6901 tttccatgaa gaagatcgcc gaaggcgagc cgcagatggc gatcatggcc gcgctcggca
     6961 ccgagctgta cacgaaatac gtcatagtcg tcgacgacga cgtcgatatc ttcaatatca
     7021 acgatgtgat gtgggcggtc gcgacgcggg tgcgggcgga gaaggacatc atgttcatcc
     7081 ccggggcaaa gggcgcgatt ctcgacccga cctcggaccc ggagaacttc acgctgacca
     7141 agatgggcat tgatgccacg cgtccggccg ggcgcgagtt tgccgagcgt ctgacgatcc
     7201 ccgacgatca gcgcgcgcgg gcacgctcca tcctggccgc ggccggcgtg aagctctgat
     7261 agtcacaagc gttgttccat ctcccgcgat gtctgtgacg ttgagccggt gatcgggcga
     7321 gcgcgagttg cgcagacgaa ggagggctgc atgccgagaa aagaactcct cgacagcata
     7381 cgcaagtacg tgcacccgtt ccgcatcagc aagggcaagg gcttccggct caaggacttc
     7441 gacccgggcg acacctgcgg cctcaagctg ggtaagaaag aggccgcaga cctccttcag
     7501 catgggattg ccgggctggc ggaggagcag gacatgctct acgcgcgaga cagctggtct
     7561 ttgctgctca tctttcaagc gatggacgcg gccggcaagg acagcacgat caagcatgtc
     7621 atgtcaggaa tcaatcccca gggctgccag gtgttctcct tcaagcaacc ctcgtcagag
     7681 gacctcgacc acgatttcct gtggcgctac gtcaaatgtc tgcccgaacg cgggcgaatc
     7741 ggcattttca accgttcata ttacgaggag gtactcgtcg tgcgcgtgca cccggaaatc
     7801 ctagccaagc agaagcttcc tgaaggcagc gtcggcaaga gaatctggga tgaacggctc
     7861 gccgacatcg ccaatttcga ggactacctc accaggcagg gcacgctgat cctcaagttc
     7921 tttttgcacg tctcgcgcga cgagcagaaa aagcgtttca tggggcgtct caatacgccc
     7981 gagaagtcgt ggaagttcgc tctcgccgat att
//
LOCUS       DATCWM010000059         2956 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_378348, whole genome shotgun sequence.
ACCESSION   DATCWM010000059 DATCWM010000000
VERSION     DATCWM010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2956)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2956)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2956
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_378348"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..844
                     /locus_tag="VIQ50_01100"
     CDS             <1..844
                     /locus_tag="VIQ50_01100"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Rid family hydrolase"
                     /protein_id="HEY9359001.1"
                     /translation="HPARPGGVPVPQHSGFIPSLVCGDYVFVAGQMPNNEAMTALEPA
                     AYRAPNAVWNGTDIRLQSEFIIAGRLKPALEAGGSSLANAIKAQVYLTDINDLPEFMD
                     VWNAHFAANPCALTVVATKGLALLESKIEINIFGVRDGAKIRKEIIEHKPSQAMRLGP
                     AAVRAGEFLCLSALYAADENGALPGAPSGLRYLGAPVQHQMRAVLDAADAIARAAGSS
                     LANVVRAHHFVGDLNLAYPALQVWNERLAGAPIPFGVVRMPAPMPIPGCDVIVDTWVY
                     CRGS"
     gene            894..2162
                     /locus_tag="VIQ50_01105"
     CDS             894..2162
                     /locus_tag="VIQ50_01105"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEY9359002.1"
                     /translation="MLHPGFHKALAYLSSDNVRSLLMDLVDISSPTGNEIGVAQYLIA
                     RMRRIGMETDLPLVDAGRPNAIGHRRGHGHGLNLLFTGHMDTSYSGAEEHLAGEGFQP
                     KAIHRDGWVWGLGANNMKSGLAAALSAIEAIAAAGIKLPGDISFAGVVGEIEKTAVEE
                     FQGVEYSGYGIGTRHLVTHGVTADFALLAEPTGLKIAIANMGVVWLRITVGGTIAHSA
                     LANRPNVVNAIAVMHELQSDIAQWARDYEAKHEYMGERANVTIAAIRGGAPWRLSRNP
                     HECSLYLDIRTVPGQSIEDVKRDLRRVLRTFGERKRIPEPAMHIYVTDPPVVLDRELA
                     VVEALGRARQAVSGEAPSFIIRRPGADAVHLTAYGVPCIIFGPGGRMHPDAGGAGMHA
                     FGEHVLVEDCVTAAKIYLALALDLCSRNAP"
     gene            2189..>2956
                     /locus_tag="VIQ50_01110"
     CDS             2189..>2956
                     /locus_tag="VIQ50_01110"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9359003.1"
                     /translation="MQWLRSPVAVFACLVALWSAAPAQNYPNRPITFVVPFAPGGLSD
                     VPARVLAAIMQEKMGASIVVENKTGASGVLGATSVWRAEPDGYTLLINALADVQNLHY
                     IKVPYDPITDFSLIGKITDGPPLVLVVNSNLPYKSLAELIADAKANPNKLSFGTSGAA
                     TSPAIALTQLNHAAGTKIVDVPYRGSGEAASAVATGAVQATFTFFTSAKPLVEAGKVR
                     VLAIAGKERIPAWPEVPTIQELGYPNFNHSGFVGLAGP"
BASE COUNT          515 a          982 c          955 g          504 t
ORIGIN      
        1 gcacccagcg cgcccaggcg gcgtgccggt gccgcagcat tccggcttca ttccatctct
       61 ggtctgcggc gattacgtgt tcgtcgccgg gcagatgccc aacaacgagg cgatgaccgc
      121 gctcgagccc gccgcctatc gcgcgcccaa cgcggtgtgg aacggcaccg acattcgcct
      181 gcagtccgag ttcatcatcg ccggccggct caagcccgcg cttgaagcgg gcggcagctc
      241 gctcgccaac gccatcaagg cgcaggtcta cctgaccgac atcaacgatc tgccggaatt
      301 catggacgtg tggaatgctc acttcgccgc caacccatgc gcgctgacgg tggtcgccac
      361 caagggactc gcgctgctcg aatccaagat cgagatcaac atcttcggcg tgcgcgatgg
      421 ggcaaagatc cgcaaggaga tcatcgagca caagccgtcg caggcgatgc ggctcgggcc
      481 tgcggcagtg cgcgcgggcg agttcttgtg cctttccgcg ctctatgccg ccgacgagaa
      541 cggcgcgctg cctggcgcgc catccggcct gcgctatctc ggcgcgcccg tgcagcacca
      601 gatgcgcgcg gtgctcgacg ctgccgacgc gattgcgcgt gccgccggca gttcgctcgc
      661 caacgtcgtg cgcgcgcacc atttcgtcgg cgacctgaac ctggcctatc cggcgctgca
      721 ggtgtggaac gagcggctcg cgggcgcgcc gatcccgttc ggagtggtgc gcatgccggc
      781 gccgatgccg atccctggct gcgacgtgat cgtggacacc tgggtttatt gccgtggcag
      841 ctgaagctcg tagggcgcaa taagcgaggc gcattgcgcc atctggattc ggtatgctcc
      901 atcctggttt tcacaaggct ctcgcctacc tcagcagcga caatgtccgc tcgctgctga
      961 tggacctcgt ggacatcagc agcccgaccg ggaacgagat tggcgtcgcg caatatctca
     1021 tcgcgcggat gcgccgcatc ggcatggaga ccgatctgcc gctcgtcgat gcaggccggc
     1081 cgaatgcgat cgggcatcgg cgcggacacg gtcatggact caacctcctg ttcaccggac
     1141 acatggacac gtcgtattcc ggcgcggagg agcatctcgc cggggagggg tttcaaccca
     1201 aggcgattca ccgtgacggc tgggtctggg ggctcggcgc caacaacatg aaaagcggac
     1261 ttgccgcggc gctgagcgcg atcgaggcga tcgccgcggc aggcatcaaa ctccccggcg
     1321 atatttcgtt cgccggcgtg gtcggcgaga tcgagaagac cgcagtcgag gaattccaag
     1381 gcgttgaata ttccggctac ggcatcggca cgcgccatct cgtcacccac ggcgttaccg
     1441 ccgacttcgc cctcttggcc gagccgaccg gcctcaagat cgcgatcgcg aatatgggcg
     1501 tcgtctggct gcggattacc gtaggcggca caatcgcgca ttccgcgctc gccaatcgac
     1561 cgaacgtggt caacgcgatc gcggtgatgc acgaattgca gagcgacatc gcgcaatggg
     1621 ctcgcgacta cgaagccaag catgaataca tgggcgagcg ggcgaacgtg accattgccg
     1681 cgatccgcgg cggggcgcca tggcgattgt cgcgcaatcc gcacgagtgc agtctctacc
     1741 tcgacattcg caccgtgccc ggccagagca tcgaggacgt caagcgcgac ctgcgccgcg
     1801 tgctgcgcac cttcggcgag cgcaaacgta tcccagagcc ggcgatgcac atctatgtca
     1861 ccgatccgcc ggtggtgctc gaccgcgagc ttgcggtggt ggaggcgctt ggcagggcgc
     1921 gccaggccgt gagcggcgag gcgccgagct tcatcatccg ccggcccggc gccgatgccg
     1981 tgcatctcac cgcctacggc gtgccctgta tcattttcgg ccccgggggg cgcatgcatc
     2041 cggatgcagg cggagccggc atgcacgcgt tcggcgagca cgtgctggtg gaagattgcg
     2101 tgaccgcagc gaagatttat ctcgcgcttg ccctcgatct gtgcagccga aacgcgccat
     2161 gatgcgcaac atgcgggaga aagaaacaat gcagtggctt cgctcaccgg tcgcggtttt
     2221 tgcctgcctc gtcgcgctgt ggtcggcggc gccggcgcag aactatccga accggcccat
     2281 cacctttgtc gtgccgttcg cgccgggcgg gctcagcgac gtgcccgcgc gcgtattggc
     2341 ggcgatcatg caggaaaaga tgggcgcctc gatcgtggtc gagaacaaga ccggcgcctc
     2401 gggcgttctc ggcgccacct ccgtctggcg ggcagagccg gacggctaca cgcttttgat
     2461 caatgcgctc gccgacgtgc aaaatctgca ctacatcaag gtgccctatg atccgatcac
     2521 ggacttcagc ttgatcggca agatcaccga tggtccgccg ctcgtcctcg tggtcaacag
     2581 caatcttccc tacaaatcgc tggcggagct gatcgccgac gccaaggcca atcccaacaa
     2641 gctcagcttc ggcacctcgg gagctgcgac ctcgccggcg atcgcgctga cgcagctcaa
     2701 ccacgccgca ggtacgaaaa tcgtggacgt cccgtatcgc ggctcgggcg aggctgccag
     2761 cgcggttgcg accggcgcgg tgcaagcgac gtttacgttc ttcacctccg cgaagcccct
     2821 cgtcgaggcc ggaaaggtgc gggtgctggc gatcgccggc aaagagcgca ttcccgcctg
     2881 gccggaggtg ccgaccatac aggaattggg ctaccccaat ttcaatcaca gcggcttcgt
     2941 cggcctggcg ggcccg
//
LOCUS       DATCWM010000060         2484 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_75984, whole genome shotgun sequence.
ACCESSION   DATCWM010000060 DATCWM010000000
VERSION     DATCWM010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2484)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2484)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2484
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75984"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            283..1179
                     /locus_tag="VIQ50_01115"
     CDS             283..1179
                     /locus_tag="VIQ50_01115"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006613559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HEY9359004.1"
                     /translation="MAEHLQQLFASARDALRPILPKRLRGLPVVPVVRLAGVIGFSTP
                     LKPGLTLATVARALERAFNMRTARAVALLINSPGGSPVQSHQIYSRIRQLAAESARPV
                     IAFAEDVAASGGYMIACAADEIFCDPSSIVGSIGVVGGSFGFPKLMDKLGVERRLYTS
                     GEHKAMLDPFLPENPQDVERLKALQRDIHQEFIDLVKRSRGARLKGPEKTLFSGEYWT
                     GGKAIEFGLADGIGDLRATLRARFGDDVVTPLVAPARGWFGRVQPAIRPSDIAGLPRA
                     ADFAEEIISALEARALWARYGL"
     gene            1203..1415
                     /locus_tag="VIQ50_01120"
     CDS             1203..1415
                     /locus_tag="VIQ50_01120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359005.1"
                     /translation="MPPLVIAPLVRLALGAVGTGVVLRWVVKEVRRVNAELDRVKAGS
                     DPAVRESFPTLRRDPRTGEWRVTREG"
     gene            1498..2439
                     /locus_tag="VIQ50_01125"
     CDS             1498..2439
                     /locus_tag="VIQ50_01125"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008961215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HEY9359006.1"
                     /translation="MSDDLPVHLRPARSFQGLILALQRYWADYGCVILQPYDMEVGAG
                     TFHPATTLRALGPKSWNAAYVQPSRRPKDGRYGENPNRLQHYYQFQVILKPSPEDIQE
                     LYLKSLSAIGIDPKLHDIRFVEDDWESPTLGAWGLGWECWCDGMEVSQFTYFQQVAGF
                     ECAPVSGELTYGLERLAMYVQGVDRVFDLNFNGREGEKKVTYGDVFLQAEQEYSRHNF
                     EFAETEMLFEQFRMAEAACRKYVDAGWVTIGNSKRHWMALPAYDQCIKASHVFNLLDA
                     RGVISVTERQSYILRVRELAKACGEAWLATEAGGAAA"
BASE COUNT          435 a          778 c          812 g          459 t
ORIGIN      
        1 tctcgtgcgg gcgacaaaag ccagtcgcgg gccgctcgtg ctccttcccg gccttatcct
       61 caacggcgcg tcgggtcgcc ccaccgcgca agcggaagcg gtgctgcggg gtgatgccgt
      121 actgccgctg agtgaaagct gatgcggcac tcgcatcgtc ttgtcgcgcg agctaacttg
      181 agggcaacat gcaggcagcc taagacgtga catcgcgccg cgccggcaca cagccgggac
      241 gtcgcatagc tgctgagcga acggaagatc gcaaccttga ccatggccga gcatttgcag
      301 cagctgttcg cgagcgcgcg ggacgcattg cgtccgatac tgccgaagcg gctgcgcggc
      361 ttgcccgtcg tgccggtggt gcgcctcgcg ggggtcatcg gattttcgac gccgttgaaa
      421 cccggcctca cgctagccac cgtcgctcgt gcgctcgagc gcgccttcaa catgcgcacc
      481 gcgcgagcgg tcgcgctgct gatcaattcg cccggcggtt cgccggtgca gtcgcaccag
      541 atctacagtc gcatccgcca gctcgcggcc gagagcgcgc gcccggtcat tgcgttcgcc
      601 gaggacgtcg cggcctccgg cggctatatg atcgcttgcg ctgccgacga gatcttctgt
      661 gacccctcct cgatcgtcgg ctcgatcggg gtcgtcggcg gctcgttcgg ctttcccaag
      721 ctgatggata agctcggcgt cgaacgccgg ctttatactt cgggcgagca caaggccatg
      781 ctcgacccgt tcctcccgga gaatccgcag gatgtcgagc gtctcaaggc gctacagcgg
      841 gacatccatc aggagttcat cgatttggtg aagcgcagcc gaggagcgcg gctcaagggt
      901 ccagaaaaaa ccttgttctc cggcgagtac tggaccggtg gcaaggcgat cgagttcggc
      961 cttgccgatg gcatcggcga tctgcgtgcc acgctgcgtg cgcgcttcgg cgacgatgtc
     1021 gtcaccccac tcgtggcgcc cgcgcgcggc tggtttggcc gagtgcagcc cgccatccgc
     1081 cccagcgata tagccggctt gccgcgcgct gccgacttcg ccgaggagat aatctcggcg
     1141 ctggaagccc gcgcactgtg ggcgcggtat ggattataag gaagctctcc aggagaccat
     1201 tcatgcctcc gctcgtcatc gcacctttgg tcaggcttgc actgggcgcg gtcggcaccg
     1261 gtgtggtcct gcgctgggtg gtgaaagagg tgcgccgcgt caacgcggag ctcgatcgag
     1321 tgaaggcggg gagcgatccg gccgtccgcg aaagcttccc gacgttacgg cgcgacccgc
     1381 gcaccggcga atggcgcgtg acgcgagaag gatgacgccg ctcgctttga tgattgtgga
     1441 tcagactgcc ggcgatcccc tgctcgagct cacggcgtta aagctgctcc gggttacatg
     1501 agcgacgatc ttcccgtcca tctgcgcccc gcgcgctcgt tccagggact gatcctggcg
     1561 ctgcagcgct attgggcgga ctacggctgc gtgatcctgc agccctacga catggaggtc
     1621 ggcgccggca cgtttcatcc ggcgacgacg ttgcgcgcgc tcgggcccaa gtcgtggaac
     1681 gcggcctacg tgcaaccttc gcgacgaccc aaggacggtc gctacggcga gaatcccaat
     1741 cgcctgcagc actattacca gttccaagtc atcctcaaac cgtcgccgga ggatatccag
     1801 gaactctatc taaagtccct ttccgcgatc ggcatcgatc ccaagcttca cgatatccgt
     1861 ttcgtcgagg acgactggga aagtcccacg ctcggcgcgt gggggctcgg ctgggagtgt
     1921 tggtgcgacg gcatggaagt gtcccaattc acctattttc aacaggtggc ggggttcgaa
     1981 tgcgcgccgg tttccggaga gctgacctac gggctcgagc gactcgcgat gtatgtgcaa
     2041 ggtgtcgacc gcgtcttcga ccttaacttc aacggccgcg agggagaaaa aaaggtcacg
     2101 tatggcgacg tctttctgca ggccgagcag gaatactccc ggcataactt cgaatttgcc
     2161 gaaaccgaga tgctgttcga gcagttcagg atggcggagg cggcgtgccg caaatacgtc
     2221 gatgccggtt gggtaacgat cggcaacagc aagcgtcact ggatggcgct gccggcctac
     2281 gaccagtgca tcaaggcgag ccatgtcttc aatctgctcg acgcgcgcgg ggtgatttcc
     2341 gtgaccgaac ggcagagcta tattctacgc gtgcgcgaac tagccaaggc gtgcggcgag
     2401 gcatggctcg cgaccgaagc gggaggagcg gcggcatgaa tgcgcaacct gaaattggcg
     2461 gccgtgcgcc gcttgcgatc gatg
//
LOCUS       DATCWM010000061         2573 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_518731, whole genome shotgun sequence.
ACCESSION   DATCWM010000061 DATCWM010000000
VERSION     DATCWM010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2573
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_518731"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..186
                     /locus_tag="VIQ50_01130"
     CDS             <1..186
                     /locus_tag="VIQ50_01130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HEY9359007.1"
                     /translation="RLKEAQKLGFARAILPESARAESAGEAGPLLKPVSSLAKLVADI
                     VADGEQGGSRHSRQEEG"
     gene            402..1040
                     /locus_tag="VIQ50_01135"
     CDS             402..1040
                     /locus_tag="VIQ50_01135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HEY9359008.1"
                     /translation="MPITLLDIILIGVMLVSGLLAMIRGFMREVLSIAGWLIAALVTL
                     YFYNKLLPFAKSYFNNDIIAAAVVVGGTFLLTLLIVSVITVRFSDMVLDSRIGALDRT
                     LGFLFGLARGLIIVVIAFLFFAWLVPDRSQPDWVRSAKSRVVLQGTGDWLMSMLPDDP
                     ESTILKRLKKPKPDEDEPAAGQRSGIDGPGEAAGYGASDRSSLRELTRSRAR"
     gene            1071..2543
                     /gene="purF"
                     /locus_tag="VIQ50_01140"
     CDS             1071..2543
                     /gene="purF"
                     /locus_tag="VIQ50_01140"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HEY9359009.1"
                     /translation="MTEARNGAGLDLDGDRLREECGVFGIFGHTDAAAITALGLHALQ
                     HRGQEAAGIVSFDGRRFHSERRLGLVGDNFSRREVIERLPGVSAMGHVRYSTTGETIL
                     RNVQPLFAELDGGGFAIGHNGNLTNGLTLRRQLIRDGAIMQSTSDTEVILHLVAHAKR
                     NRFIDRFIEGLRQLEGAYAFVGLTNKKLIGARDPLGIRPLVIGRLDGHPILASETCAL
                     DIIGAKYVRDVENGEVVVFDEEGIYSHKPFPPMAPRPCIFEYIYFSRPDSVVGGRNVY
                     DVRKTMGAQLAREAPAGADVVIPVPDSGVPAAIGYAQESGIPYELGIIRNHYVGRTFI
                     EPSQHIRQLGVRLKHSANRAVVNGKRIVLIDDSIVRGTTSVKIVQMMREAGAKEVHFR
                     IASPPITHSDYYGIDTPERDKLLAATHDLEGMRRFIGADSLAFLSIEGIYRAMGYEQR
                     DPLKPQFTDHCFTGDYPTPLTDQTGHEASPRQLSLLAEAS"
BASE COUNT          457 a          841 c          804 g          471 t
ORIGIN      
        1 aggctcaagg aggcgcagaa gctcggcttt gcccgcgcca ttctgcctga atctgcccgc
       61 gcggaatcgg ccggcgaagc aggaccgttg ctcaaacccg tgagcagcct tgcaaaactt
      121 gtcgccgaca tcgtggccga cggtgagcaa ggaggaagca ggcactcgcg ccaagaagaa
      181 ggatgacggc gcggcctcct cccgctatac agcggctgaa ctgtcgaccc cgcgcgccgc
      241 gctgcctcga ccccggggcc gatatgacag gaacattaac aagttggggg ccattcttcg
      301 acgggccttg cggagcaagc aggaggcggg gagcttggta tcatctcatt cgccgattcg
      361 accggcggcg tcctgaagct caggagcatc cgaactcggt catgcccatc acgctcctcg
      421 acatcatcct aatcggcgtc atgctggttt cggggctgct cgccatgatt cgcggcttca
      481 tgcgcgaggt cctgtcgatc gccggttggc tgatcgcagc gctggtgaca ctttatttct
      541 ataacaagct gctgccgttc gcgaaatcgt atttcaacaa cgacatcatc gcggccgcag
      601 tagtggttgg cggcacattt ttgctgacgc tgctgatcgt ttcggtcatc accgtacgct
      661 tttccgacat ggtcctggat agccgcattg gcgcactcga ccgcacgctt ggctttctat
      721 tcgggctcgc ccgcgggctg atcatcgtcg tcatcgcatt tctgttcttc gcctggttgg
      781 tgcctgaccg cagccagccc gactgggtcc gcagcgcaaa atcgcgggtc gtgttgcagg
      841 gaaccggcga ttggctgatg tcgatgttgc cggatgaccc ggaaagcacc atcttgaaac
      901 ggttgaagaa acccaagccg gacgaggacg agccggcggc aggtcagcgg tcgggcatcg
      961 acggtcccgg cgaggctgcc gggtacgggg catccgaccg gtccagcctg cgggagttga
     1021 cccgcagcag ggcgcggtga ccacgcttac cggatggaag aggagatgag atgaccgaag
     1081 ctcgaaacgg tgccggcctc gatctcgacg gcgaccggct gcgtgaagag tgcggcgtct
     1141 tcggcatatt tggacatacg gacgcggcgg caatcaccgc cctcggcctg cacgcccttc
     1201 agcaccgcgg gcaagaggcc gccggcatcg tctctttcga cggcaggcgg tttcattccg
     1261 agcggcggtt ggggctcgtc ggcgacaatt tctcccgccg cgaggtgatc gagcgcctgc
     1321 ccggggtctc ggcgatgggc cacgtgcgct attcgaccac cggcgagacc atcttgcgca
     1381 acgtgcagcc gctgttcgcg gagctcgacg gcggcgggtt tgcgatcggc cataacggca
     1441 atctgaccaa cgggctcacc ttgcgccgcc agctgatacg cgacggcgcc atcatgcagt
     1501 cgacctccga taccgaggtc attctgcacc tggtcgccca cgccaagcgc aaccgtttca
     1561 tcgaccgctt catcgagggg ctgcgccaac tcgaaggcgc ctacgccttc gtcggcctca
     1621 ccaacaagaa gctcatcggc gcgcgcgatc cgctcggcat tcgtccgctg gtgatcggtc
     1681 ggctcgacgg ccacccgatc ctcgcctcgg aaacctgcgc gctcgatatc atcggcgcga
     1741 aatacgtacg cgacgtcgag aacggcgagg tcgtggtgtt cgatgaagag ggaatatact
     1801 cgcacaagcc gttcccgccc atggcgccgc ggccgtgcat cttcgaatac atctatttct
     1861 cgcgtccgga ttcggttgtc ggcggccgca acgtctatga cgtgcgcaag accatgggtg
     1921 cgcagctcgc ccgcgaggcg ccggccgggg ccgatgtggt gatcccggtt cccgattccg
     1981 gcgttccggc ggccatcggc tatgcccagg aatccggcat accctatgag ctcggcatca
     2041 tccgcaacca ttacgtcggg cgcaccttca tcgagccgag ccagcacatt cgccagctcg
     2101 gtgtgcgcct caagcacagc gccaatcgcg cggtcgtgaa cggcaagcgc atcgttctca
     2161 tcgacgattc catcgtgcgc gggaccacct cggtgaagat cgtgcagatg atgcgcgagg
     2221 ccggcgccaa ggaggtgcat ttccgcatcg cctcgccgcc gatcacccat tcggattatt
     2281 acggcatcga cacgccggag cgcgacaagc tgctggcggc gacccacgat ctcgagggca
     2341 tgcgccgctt catcggcgcg gattcgctcg cctttctctc gatcgagggc atctaccgcg
     2401 ccatgggcta tgagcagcgc gatccgctga aaccgcaatt tacggatcac tgcttcaccg
     2461 gggactatcc gaccccgctc accgaccaga ccggccacga agcatcgccg cggcaattgt
     2521 cgttgctcgc cgaggcgagt tgacgcgccg cgcgacggcg ggaccgcgcc cgg
//
LOCUS       DATCWM010000062         3093 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_302773, whole genome shotgun sequence.
ACCESSION   DATCWM010000062 DATCWM010000000
VERSION     DATCWM010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3093)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3093)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3093
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_302773"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1143)
                     /locus_tag="VIQ50_01145"
     CDS             complement(<1..1143)
                     /locus_tag="VIQ50_01145"
                     /inference="COORDINATES: protein motif:HMM:NF028178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HEY9359010.1"
                     /translation="MAVVIGVSWVVLEYLVPSPPSSVTIATGGKGTTFDYFGERYRAR
                     FVRAGIKLNVRATDGALENLRLLQDPKSNVQIAFTTGGISNSTQAPELLSMGLISNVP
                     FWIFYPSSQSLDSLAQLKGKRIAVGPEGSGARYVAERILSKAKIDAKTATLLPLAGDS
                     AVAALKDGTADVALLVGGADAPSVESLLNNPNVRLMNFSLADAFMRVFPDLVRLVLPK
                     GVVQLDPPNPPDDITLIGTTAKVLIRDDLHPVIIQLLAQTLKEEHSGAGLFQRSGEFP
                     VTDDPEYTMSSVAVEYYRSGPSLLAKYLPLLRTTYVQRTIAFLVAALAIVFPVFGIAP
                     RLYEWFVRQRFRQFYQRLRAIENALQERLTAAKAEALQAELDDIERS"
     gene            complement(1362..2231)
                     /locus_tag="VIQ50_01150"
     CDS             complement(1362..2231)
                     /locus_tag="VIQ50_01150"
                     /inference="COORDINATES: protein motif:HMM:NF013722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
                     /protein_id="HEY9359011.1"
                     /translation="MAQPALNYDRIMAYRPADIRVSYGERECILYALGIGIGMDPLDP
                     GELKFVYERAGLEAFPTMAVVLGWPGRMTDPAFGIDERLVVHGDLKVVLHRPLASQAT
                     LVSRPRVKEVIDKGPGGAAIIQSRRELIGEDGAPVATVDSSTFARKHGGFGGKATQTA
                     EPHAIPERAPDEICDLPTPPNLALLYRLNGDENPLHADPQRAKAAGFERPILHGAASF
                     GVAARAILRACAGSRPERLKSIEARFSRPVFPGDTIRTEMWRAGEHVSFQCRVVSRND
                     IVLSNGLATLRPG"
     gene            2327..>3093
                     /locus_tag="VIQ50_01155"
     CDS             2327..>3093
                     /locus_tag="VIQ50_01155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007565906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEY9359012.1"
                     /translation="MSESTVLISKDARGVATVTINRPKVRNAIDDTVIRSLTDVFKTL
                     HADAETRVVVLTGSGSAFSAGADLDWMRRMATAGDAENFASAKTISAMLRGLNELAKP
                     TIARVNGAAYAAGIGLVAACDIAVAAEEAMFSISEVRIGLVPSTISPYVIAAIGARAA
                     RRYFLTGEAFSAPEAHRLGLLHQVVPGGGLDAAIESVIASLLAGGPQSQARAKRLIAQ
                     IAGRPVDDALEALTARSIADARASAEGREGIAAFLEKR"
BASE COUNT          610 a          967 c          924 g          592 t
ORIGIN      
        1 tgacctctcg atatcatcta gttcagcctg gagagcttct gctttcgcag ctgtgagtct
       61 ttcttggagt gcattttcaa tggctctcag ccgctgataa aactgccgga accgttgtcg
      121 cacaaaccat tcgtacagcc tcggcgcaat gccaaaaact ggaaaaacga tcgctagcgc
      181 cgcaaccaga aacgcaatcg tcctttgtac atatgtagtc ctcaagagag gcagatattt
      241 cgcaagtagc gaagggccac tcctgtaata ctcaaccgcg acagatgaca ttgtgtattc
      301 cggatcatcg gttacaggaa attccccgct gcgctgaaag agtcctgctc cactgtgttc
      361 ctccttcagc gtctgagcta ggagctgaat gatcacagga tgaagatcat cacgaattag
      421 gaccttagcc gtggtcccta tcaacgttat gtcatctggt ggattaggag ggtcgagctg
      481 aactacgccc ttcggtaaca ccaggcgcac aagatccggg aacacccgca taaaagcatc
      541 ggccaatgaa aagttcataa gccgaacgtt cggattatta agcaaacttt ctaccgaagg
      601 cgcatccgca ccgcctacaa gcagagccac atctgccgtc ccatctttta gtgccgcaac
      661 agcgctgtca ccggccagtg gcagcaatgt cgcggtctta gcgtctattt tggctttact
      721 aagaatgcgt tccgcgacat accgagcgcc gcttccctcc ggccctactg caatgcgctt
      781 tcctttaagt tgcgccagac tatcgagtga ttggctggat ggataaaaaa tccaaaacgg
      841 aacatttgag ataagtccca tcgataggag ttcgggcgcc tgagtgctgt tggagatacc
      901 acctgtagtg aatgcaatct gtacgttgga cttcggatcc tgcaaaagtc tgagattttc
      961 taacgcgcca tcagtggccc ggacattcag ttttattccc gcgcggacaa atcgtgctcg
     1021 atatctttct ccaaagtaat caaacgtagt tcctttccca ccagtcgcga tagtgacgct
     1081 ggatggcggt gaggggacaa gatattccag tacgacccag ctgacgccga ttactacggc
     1141 caacgcgact agtcctacga tgagtcttcc gtagtccaat cgctgcatgc tgctctgtct
     1201 ccgcaaggcg gattggctcc ccaccaggac cggcaatgaa attgcgtcgc ctcatgggcg
     1261 ttgccttcga gccgacgaca acaccctagc acatcatggg tgattacagt gcagcaggtg
     1321 ctatggggcg ccgcacgctc gctccgcccg gcgaaacagc cctagccggg gcgcaacgtg
     1381 gcaagcccgt tgctgagcac gatgtcgttg cgggagacga cgcggcactg gaacgacacg
     1441 tgctcgcccg cgcgccacat ctcggtgcgg atcgtgtcgc cgggaaacac cgggcgcgaa
     1501 aatcgtgcct cgatgctttt cagccgctcc ggtcgggagc cggcgcacgc gcgcaagatg
     1561 gcgcgcgccg cgacgccgaa gctcgccgcc ccatgcagga tggggcgctc gaatcccgcg
     1621 gccttggcgc gctgcggatc ggcatgcagc ggattctcgt cgccgttgag ccggtagagg
     1681 agcgcgagat tgggcggcgt cggcaggtcg cagatctcgt ccggtgcgcg ctcggggatc
     1741 gcatgcggct cagccgtctg cgtcgccttg ccgccgaagc cgccgtgctt gcgcgcgaag
     1801 gtgctgctgt ccacggtcgc gaccggcgcg ccatcctcgc cgatcagctc gcgcctgctc
     1861 tggatgatcg ctgcgccgcc gggacctttg tcgatgacct ccttgacgcg cggacggctc
     1921 accagcgttg cctgggatgc aagcgggcga tgcagcacca ccttgagatc gccgtggacc
     1981 acgaggcgct cgtcgatgcc gaacgccggg tcggtcatgc ggccgggcca gcccagcacc
     2041 accgccatcg tgggaaaggc ttcgagcccc gcccgctcgt agacgaattt gagctcgccc
     2101 ggatcgagcg ggtccatgcc gatgccgatg ccgagcgcgt acaggatgca ttcgcgctcg
     2161 ccgtagctca cgcggatgtc ggccggccgg taggccatga tccggtcgta attcagcgcc
     2221 ggctgcgcca acgtcgtctc ctgcagtttc ctcacacggc agttttcgca aggcgagaaa
     2281 taatgcaatc tgaatccacc gatagtctac ccgatggcag gatgcgatga gcgaatccac
     2341 cgttctcatc agcaaagacg cgcgcggcgt cgccaccgtg accatcaacc ggccgaaggt
     2401 gcgcaacgcc atcgacgata ccgtcatccg gtcgttgacc gacgtgttca agacgctcca
     2461 cgccgatgcc gaaacgcgcg tcgtcgtgct gacggggagc ggctcggcgt tttccgccgg
     2521 cgccgatctc gactggatgc ggcggatggc aacggccggc gatgcggaga atttcgccag
     2581 cgccaagacg attagcgcga tgctgcgcgg tctcaacgag ctggcaaagc cgaccatcgc
     2641 cagagtaaac ggcgccgcct acgcagcggg tatcgggctt gtcgctgcct gcgacatcgc
     2701 ggtggcggcc gaagaggcga tgttctcgat ctccgaggtg cgcatcggcc tcgtgccctc
     2761 gacgatcagc ccctacgtca tcgccgcgat cggcgccagg gcggcgcgcc gctatttctt
     2821 gaccggtgag gcgttctccg ccccagaggc gcaccgattg ggcctcctgc atcaagtcgt
     2881 tcccggcggc ggcctcgacg cggccatcga aagcgtgatt gcgagcttgc tggccggcgg
     2941 gccgcaatcg caagcgcggg cgaaacggct catcgcccag atcgcgggcc gtccggtcga
     3001 cgacgcgctt gaggcgctga cggcgcgcag cattgccgac gcgcgcgcct cggccgaagg
     3061 acgcgagggc atcgccgcgt ttctggaaaa acg
//
LOCUS       DATCWM010000063         2724 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_157095, whole genome shotgun sequence.
ACCESSION   DATCWM010000063 DATCWM010000000
VERSION     DATCWM010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2724
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_157095"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2724)
                     /locus_tag="VIQ50_01160"
     CDS             complement(<1..>2724)
                     /locus_tag="VIQ50_01160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY9359013.1"
                     /translation="PKFAEAVARKVYYGPVYFRRESEPYMTLAIAGTRRDAGVSVAEV
                     NLKLIWDVVSQIKVGERGHAYVVDAQGRLIAHPDISLVLRNTDMSKLAQVRAARASTS
                     GAATPDNPAETVQEAENIEGRKVLTAYAPVAPLGWLMFVELPAEEAYAPLYAALKRLA
                     FVLLGALGFAVLAGMFLAGRMVGPIQALQTGAARIGRGDLSQRIAIKTGDELEALADQ
                     FNDMAGQLQESYAGLENKVEQRTRELSESLEQQTATSEVLRVISSSPGDLKPVFDTML
                     ANATRLCEAKFGTMFLREGDGFRNVCNIADPSGYTEWYHREPVIVLRDHHPDMPLARI
                     ADTKAVVHVADLRTEQAYIEHDPRMLALVDSAGARSLLSVPMLKENELVGAIAIYRQE
                     VRPFTDKQIDLVSNFASQAVIAIENVRLLTELRARTEELGQSVEELRALGELTQAVNS
                     TLDLQTVLSTIVSKAVQLSDTDAGSIYVHDEMRQEFELQANYGMTGDLIAALKEHHAE
                     ISGAVAEATKQGEPVQVADMRTGAPVPANALMLDAGYRARLLVPLLRFNEVIGALVVR
                     RKAPGEFPKSTIDLLRTFAAQSVLAIQNARLFQEIEEKGRQLELASQHKSQFVASMSH
                     ELRTPLNAIIGLTEMMVTNAARFGTEKASEPLKRVHRAGQHLLGLINQVLDLSKIEAG
                     KLELNPESVKLAPLVDEVIGTARQLAEQNKNRLVVEAQEKLGALTVDPMRLKQILLNL
                     LSNACKFTSQGEVKLRVRKLVDGRNWIEFAVSDTGIGMTPEQQAKLFEEFTQADSSTA
                     RRYGGTGLGLAITRKLARMMGGDVTVESAPGKGSVFSVRLPAGSDAVARSATNGSRPP
                     SGDCVLVIDDDPTARDLIADHLKADGFSVVTAAGGLEGLKLARELRPIAIT"
BASE COUNT          434 a          862 c          903 g          525 t
ORIGIN      
        1 gggtgatggc gatcggccgc aattctctgg cgagcttcaa tccctccagt ccgcctgccg
       61 cggtcacgac cgaaaagcca tccgctttga ggtggtcggc aatgagatcg cgcgcggtcg
      121 gatcgtcgtc gatgacgagc acgcaatcgc ccgacggcgg cctgctgccg ttggtagcgc
      181 ttcttgcaac ggcgtccgac ccggccggca gtcgcacgct gaagaccgag cccttgcccg
      241 gcgcgctctc cacggtgacg tcgccgccca tcatgcgcgc gagcttgcgc gtgatggcga
      301 ggccgagacc ggtgcccccg tagcgtcgcg cggtcgaaga gtcggcctga gtgaattcct
      361 cgaacagctt ggcctgctgc tccggcgtca tgccgatgcc ggtgtcgctg accgcgaatt
      421 cgatccagtt gcggccgtcg acgagcttgc gcacccgcag cttgacctcg ccctgcgagg
      481 tgaatttaca ggcattgctc aggagattga gcaggatctg tttgagccgc atgggatcga
      541 cggtgagcgc gccgagcttc tcctgcgctt ccaccacgag gcggttcttg ttctgctcgg
      601 cgagttgccg cgcggtgccg atcacctcgt cgaccagcgg cgccaacttc acggactccg
      661 ggttgagctc gagcttgccg gcttcgatct tggagaggtc gagcacctgg ttgatgaggc
      721 cgagcaggtg ttggccggcg cggtgcaccc gcttgagggg ctccgacgct ttctcggtcc
      781 cgaaccgcgc ggcattcgtg accatcatct cggtcaaacc gatgatggcg ttgagcggcg
      841 tgcgcaattc gtggctcatg ctggcgacga actgcgactt gtgctggctt gccagctcaa
      901 gttgacgccc tttctcctcg atttcctgga acaggcgcgc attttggatc gccagcacgg
      961 actgggcggc gaaggtgcgc aggagatcga tggtgctttt gggaaattcg cccggcgcct
     1021 tgcgccgtac caccagcgcg cctatcactt cgttgaagcg cagcagtggg acgagtagcc
     1081 gcgcgcggta tccggcgtcc aacatgagcg cattcgctgg aacgggcgct cccgtccgca
     1141 tgtcggcgac ctgcaccggc tcgccctgct tcgtggcttc ggcgacggca ccggaaatct
     1201 cggcgtggtg ctccttgagc gcggcgatca agtcgccggt catgccgtag ttggcctgca
     1261 gctcgaattc ctgccgcatc tcgtcatgga cgtagatcga tccggcgtcg gtgtcggaga
     1321 gctgaacagc cttggaaaca atggtggaga gcaccgtctg caggtcgagc gtggagttga
     1381 ccgcctgtgt cagttcgccc aatgcgcgca gctcctcgac cgattgcccg agctcctcgg
     1441 tgcgcgcgcg cagttcggtg agcagccgca cgttctcgat ggcgatcacg gcttggctgg
     1501 cgaagttcga cacgaggtcg atctgtttgt cggtgaatgg ccgcacctcc tggcgatata
     1561 tcgcgatagc gccgacgagc tcgttctcct tgagcatcgg caccgagagg aggcttcgcg
     1621 cgccggcgga gtcgacgaga gcgagcattc tgggatcgtg ctcgatgtac gcttgctccg
     1681 tcctgaggtc ggcaacgtgg accaccgctt tggtatccgc tatgcgggcg agcggcatat
     1741 ccggatgatg atcgcgcagc acaatcaccg gttcgcggtg gtaccattcg gtatagccgg
     1801 acggatcggc gatattgcag acgttgcgga agccgtctcc ttcgcgaagg aacatggtgc
     1861 cgaacttggc ctcgcagagc cgcgtcgcgt tcgccagcat tgtatcgaac acgggcttga
     1921 ggtccccggg cgaactcgaa atgacgcgca gcacctcgga agttgcggtc tgctgctcaa
     1981 gcgattcgct taattcgcgg gtgcgctgct cgaccttatt ttccaggccg gcataggatt
     2041 cctgcagctg gcccgccatg tcgttgaact ggtcggcgag cgcctcgagc tcgtccccgg
     2101 tcttgatcgc gatgcgctgg gagagatcgc cgcggccgat gcgcgccgcg ccggtctgta
     2161 gcgcctggat cggtccgacc atgcggccgg cgagaaacat gccagcgagc acggcgaaac
     2221 cgagcgcgcc caaaagcacg aaggcaagtc gcttcaatgc cgcgtagagc ggcgcgtagg
     2281 cttcctcggc cggcagctcg acgaacatca gccagccgag cggcgctacg ggggcatagg
     2341 cggtgagcac cttgcgccct tcgatgttct ccgcttcctg caccgtctcc gccggattgt
     2401 cgggggtcgc cgcgccggag gtgctggcgc gcgccgcgcg cacttgcgcg agcttcgaca
     2461 tgtcggtgtt gcgcagcacc aggctgatat cagggtgcgc aatcagccgc ccctgcgcgt
     2521 cgacgacata ggcgtggccg cgctcgccaa ccttgatctg cgagaccacg tcccagatca
     2581 gcttgagatt gacctcggcg acgctcacgc cggcgtcgcg tcgcgtcccg gcgatggcca
     2641 aggtcatgta cggctcggat tcacggcgga aatagaccgg gccgtagtag accttgcggg
     2701 cgaccgcttc cgcgaacttc gggt
//
LOCUS       DATCWM010000064         3181 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_373065, whole genome shotgun sequence.
ACCESSION   DATCWM010000064 DATCWM010000000
VERSION     DATCWM010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3181
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_373065"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..212)
                     /locus_tag="VIQ50_01165"
     CDS             complement(<1..212)
                     /locus_tag="VIQ50_01165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359014.1"
                     /translation="MRLCLCVFLGSLAAALSLPAALCAEPADEPFKLADTALEPVRWT
                     DLAGWAADDHLAAFATYQASCRALRNG"
     gene            complement(228..929)
                     /locus_tag="VIQ50_01170"
     CDS             complement(228..929)
                     /locus_tag="VIQ50_01170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tim44/TimA family putative adaptor protein"
                     /protein_id="HEY9359015.1"
                     /translation="MFDIYTIIFLALAVFIFLRLRSVLGQRTGRERPPYDPYSAREVR
                     GATNDNVVTLPGRGGETAQKPVDASEPGERWKGIAETGSALAAGLDSIAREDKTFDGK
                     HFIAGARAAYEMIVLAYAEGDRRSLKNLLSREVYEGFESAIRERENKGETVETRFVAI
                     DKSDIAGVEVRGRTAQVTVRFVSQLISVTRDKSGNVIEGNPDKVTDVTDVWTFARDLS
                     SRDPNWKLVATEAGQ"
     gene            1639..2139
                     /gene="secB"
                     /locus_tag="VIQ50_01175"
     CDS             1639..2139
                     /gene="secB"
                     /locus_tag="VIQ50_01175"
                     /inference="COORDINATES: protein motif:HMM:NF004392.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0051262 - protein tetramerization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HEY9359016.1"
                     /translation="MATTGNGGPAPSPAPQQGQAQLTVLGQYIKDFSFENPNAPRSLT
                     PQQTQPAINIQINVGVQQLAQTDYEITLNLEGKAENAGTILFAFDLTFAGVFRIQNVP
                     AETLQPIVMIECPRLLFPFAREIVATSVRNGGFPPLLLDPVDFVALYQQRAAQMQAPQ
                     PTTPSS"
     gene            complement(2203..2913)
                     /gene="dnaQ"
                     /locus_tag="VIQ50_01180"
     CDS             complement(2203..2913)
                     /gene="dnaQ"
                     /locus_tag="VIQ50_01180"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HEY9359017.1"
                     /translation="MREIVLDTETTGLDPFQGHRMVEIGCIELVNRIPSGQSFHRYIN
                     PEREVPAEAVAIHGLSIEFLKDKPFFAEIAEELAAFIGDAPLIAHNALFDLAFLNAEL
                     ERAGKLLLPRERVVDTLLLARRKYPGAPNRLDDLCIRCGIDNSRRTKHGALLDAELLA
                     EVYLDLIGARQAQLVLVEVGADAIGAPIGPVVVQVRPVALVPRLSTEECDAHLAFVAT
                     LGEAAIWREYLQLPAGGA"
     gene            complement(2950..>3181)
                     /locus_tag="VIQ50_01185"
     CDS             complement(2950..>3181)
                     /locus_tag="VIQ50_01185"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HEY9359018.1"
                     /translation="AVVVVSAPADVQRARTLERPGMTVDKLDAILARQMPDHEKRRRA
                     DFVVDTSRGFEAARAKVRAILDAVATMPKRRR"
BASE COUNT          584 a         1049 c         1000 g          548 t
ORIGIN      
        1 ccgttgcgca atgcccgaca gctggcctgg taagtcgcga acgcggcgag gtgatcgtcg
       61 gctgcccagc cggcgagatc ggtccatctg accggctcga gcgcggtgtc agcaagcttg
      121 aacggttcgt cggcaggctc ggcgcaaagc gccgcgggga gcgatagcgc ggctgcgagg
      181 cttccgagga agacgcacag gcagagccgc atcgcgttcc gccccggtca ctgcccggct
      241 tcggtagcga cgagcttcca attgggatcg cgcgaggaga gatcgcgcgc gaaggtccac
      301 acgtcggtga cgtcggtgac tttatcggga ttgccctcga tcacgttgcc ggatttgtcg
      361 cgggtgacgg aaatgagctg cgacacgaac cgcacggtga cctgcgcggt gcgaccgcgt
      421 acctcgacgc cggcgatgtc cgacttgtcg atggcgacga agcgggtctc gaccgtctcg
      481 cctttgttct cacgctccct gatcgcggac tcgaacccct cgtagacttc gcgcgagagc
      541 agattcttga gcgagcggcg gtcgccttcg gcataagcga gcacgatcat ctcgtaggcg
      601 gcacgcgcgc cggcgatgaa atgcttgccg tcgaaggtct tgtcctcgcg cgcgatcgaa
      661 tcgagcccgg cggccagcgc cgatccggtc tcggcgatgc ccttccagcg ctcgcccggt
      721 tccgacgcgt cgacgggctt ttgcgcggtc tcaccgcctc ggccgggcag cgtcaccaca
      781 ttgtcattgg tcgccccgcg cacctcgcgg gcggaatagg gatcataagg cggtcgttcg
      841 cggccggtgc gctggcccaa cacgcttcgc aagcgcagga agatgaacac tgccagcgcc
      901 agaaagatga tggtgtagat atcgaacacg tctcgcacac tctcgatcgc cgtgagggaa
      961 ccgcgggatc agtagaaggc cagacaggaa atctgcagac gcagagacgg ttcccgcatc
     1021 actatgtaag tgcgccaccg cactgatcca gaggccttgc gccgaactcg gcgcataaat
     1081 cgcgccgagt gaccatagac gatcccgacc gtgtcgccaa caaggctgac gaccccagga
     1141 atggcgcagg aatgggcgga tgtccttgga taaaggcgat taattgcacg cgcgcgtcgt
     1201 ggcgaactca ctgcttttat tgtcccggag agcgttcgga cgacgttttc attgcccccg
     1261 cgttgtgtcc ttctggaggt cgaaatgccc cggtcttgag cacctgcgcg gggcgctttc
     1321 ccacgaatat cgcaagccgg cattcgaagg agcacgcgaa cggaaccagg ctgctggaat
     1381 ctctgagatt tccggttttt accgccccgg cgcccggccc ggcgcgccgc gcgattggcg
     1441 cccaggctct ttctttatcg cggcaaagct cagccgcgcc ggcactcggg ccccgcgcgc
     1501 atggacgatc cacgcggcgc caatccgagg gctgtgaact ccaagtctgg caggtgaaat
     1561 ccttgtccga ccggggcgcc tgtgttagcc agccacgccg ccgattgcgg cgattgtgag
     1621 cagcgagagg tagagtcgat ggcgaccacc ggcaatggcg gacccgcgcc gagcccagcc
     1681 ccgcagcaag gtcaggcgca gctcaccgtg cttggccaat acatcaagga tttctcgttc
     1741 gagaatccga acgcgccgcg ctccttgacg ccgcagcaaa cgcagcccgc catcaacatc
     1801 caaatcaatg tcggcgtcca acaactcgcg cagaccgact acgaaatcac gcttaacctc
     1861 gaaggcaagg ccgagaacgc cggaacgatt ctgtttgcct tcgatctgac gttcgccggc
     1921 gtttttcgca tccagaacgt gccggctgag acgttgcagc cgattgtaat gatcgagtgt
     1981 ccgcgcctgt tgtttccatt cgcgcgcgag atcgtcgcaa cctcggtgcg caacggcggc
     2041 tttccgccac tgttgctcga tcccgttgac ttcgtcgcgc tctaccagca gcgcgcagcg
     2101 cagatgcaag cgccgcagcc gaccacgccg tcgagctagc atcgaatctc gctgacgctc
     2161 tctcgcaatc gcccgtagga ctgcctagga cgccctgagg cttcaggcgc cacccgccgg
     2221 caactgcaga tactcgcgcc agatcgcagc ctccccgagc gtcgcgacaa aggcgagatg
     2281 cgcgtcgcac tcctcggtgc tcaagcgggg cacgagcgcc acgggtcgca cctgaacgac
     2341 cactgggccg atcggcgcgc cgatcgcgtc cgcacccact tcgaccagaa cgagctgagc
     2401 ttgccgggcg ccaatcaggt cgagatagac ctctgccaag agttcggcgt cgagcaaggc
     2461 gccgtgtttg gtgcgccgcg aattgtcgat gccacaacgt atacaaagat catccaaccg
     2521 gttgggcgcc ccggggtact tgcgacgcgc caacagcagc gtgtcgacca cacgctcgcg
     2581 cggcagcagc agttttcccg cgcgctcgag ttcggcgttc aagaaggcga ggtcgaacaa
     2641 ggcgttgtgc gcaatgagcg gcgcgtcgcc gatgaatgcc gccagctcct cggcgatctc
     2701 ggcgaagaac ggcttgtcct tgagaaactc gatcgacagg ccgtggatcg cgaccgcctc
     2761 cgccggcacc tcgcgctcag gattgatata gcggtggaag ctctgcccgg acggaatgcg
     2821 attgacgagc tcgatgcagc cgatctccac catgcgatgg ccctggaagg gatcaagccc
     2881 tgtcgtctcg gtgtcgagca cgatttcgcg cacgttgaaa gtctcgcggt ctgggtcgca
     2941 gccggcgaat caccggcggc gcttcggcat tgtagcaacc gcgtccagga tggcacgcac
     3001 cttggcgcgc gccgcctcga agccgcgcga ggtgtccacg acaaaatccg cccggcggcg
     3061 cttctcgtga tccggcatct gcctcgccag gatggcgtcc agcttgtcca cggtcatgcc
     3121 tgggcgctcg agcgtgcgcg cgcgttgcac gtcggccggc gccgatacca ccaccaccgc
     3181 g
//
LOCUS       DATCWM010000065         2233 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_362233, whole genome shotgun sequence.
ACCESSION   DATCWM010000065 DATCWM010000000
VERSION     DATCWM010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2233
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_362233"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..454)
                     /locus_tag="VIQ50_01190"
     CDS             complement(<1..454)
                     /locus_tag="VIQ50_01190"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY9359019.1"
                     /translation="MPDDLSHERVSRLTGIALMCGAVACFALLDTTAKYLNLYMSALQ
                     VAWARYTGAFLFPFIVSNPWTRPGLTRTNRPVLQLARSVLLLGSTLCNFAALRYLQLD
                     EAIALIFSTPFFVAALSGPMLGEWVRWRRWSAIAVGFLGVVVVARPGAA"
     gene            668..1441
                     /locus_tag="VIQ50_01195"
     CDS             668..1441
                     /locus_tag="VIQ50_01195"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEY9359020.1"
                     /translation="MRFFRRIASVSATLITLTSMAGAADIRVVSVGAVQNALRDLASE
                     FGNETGHRVVLTIDSPAVVTQKIKDGEIYDAVIVSEPAMDRLDKEGVVNPESRVPLAK
                     TGMGVAVRAGAPMPDLSTPEAFKQALLAAKSVVYGDPTLPNQSGEKAERILVQAGILD
                     ALKPRLRIVPAQAASQELIAKGEVEMGLYNVSEIPEGKGLAFAGSVPKLLQVATSYEG
                     ALMSDGAVPEAARAFIRFLAGPDARAKWLAAKLEPSADH"
     gene            complement(1452..>2233)
                     /locus_tag="VIQ50_01200"
     CDS             complement(1452..>2233)
                     /locus_tag="VIQ50_01200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020810031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEY9359021.1"
                     /translation="PTLADLRACFWSIARGTALGSLLGVLPGGGALLASFAAYMVEKK
                     IAKPPRAFGEGDIRGVAAPESANNAGAQTSFIPMLTLGIPSNPTMALMIGALMIQGIA
                     PGPQVMTERPELFWGLIASMWIGNLMLLVLNLPLVGVWIKLLAVPYRLLFPAIFVFCC
                     IGAYAVDNKIFDVYALAALSALGYVLLKLDCEPAPMVLGFILGPMMEENLRRAMMISF
                     GDPTVLITRPISAGFLLAALALLLAIALPALRARREEAMQE"
BASE COUNT          455 a          710 c          741 g          327 t
ORIGIN      
        1 tcgccgcgcc cggacgcgcc accaccacga caccgaggaa accgaccgcg atcgcactcc
       61 agcgccgcca gcgcacccac tcgcccagca tcggtccgga cagtgccgcg acaaagaacg
      121 gtgtggagaa gatgagcgcg atcgcctcgt cgagctgaag gtatcgtaaa gcggcaaaat
      181 tgcagagcgt ggaacccagc agcagcaccg accgcgcgag ctgcagcaca gggcggttgg
      241 tgcgggtcaa gccagggcgc gtccacggat tggacacgat gaaagggaac aggaatgccc
      301 ccgtatagcg cgcccacgcc acttgcaacg cactcatgta gaggttgaga tatttcgccg
      361 tggtgtcgag cagggcaaaa cacgccaccg ccccgcacat cagcgcgatg ccggtgaggc
      421 gcgaaacgcg ctcgtgcgat aggtcgtcgg gcatggtgca ggatcaaggc gaccgctttg
      481 aagttcccgt catgccgccg cccgctcgct cgagaacttc aaatccaagg atcgcaccac
      541 gatcataagc tgcccgtgtc cgctcgattc cgaagtttgc atttgagagc gccgtgaggg
      601 tgtgcaaagt tcggaatcgg gacctaggga tgatggggac atgtggcacc tccgaggaga
      661 agacacaatg cggtttttcc gccggatcgc atccgtctcg gcaacactga tcacgctgac
      721 gagcatggct ggcgcggccg acatccgcgt ggtcagcgtc ggcgcggtgc aaaacgcgct
      781 cagagatctc gcctccgagt tcggcaacga gaccggtcac cgcgtggtcc tcaccatcga
      841 ttcacccgcc gtcgtcacgc aaaagatcaa ggacggcgag atctacgacg ccgtcatcgt
      901 ctccgaaccg gccatggatc ggctcgacaa agagggcgtg gtcaatccgg aaagccgcgt
      961 cccgctcgcc aagaccggca tgggagtggc cgtgcgcgcc ggtgcgccga tgccggacct
     1021 gtcgacaccg gaggcgttca agcaggcgct gctggcggcg aagtcggtgg tgtacggcga
     1081 cccgacgcta cccaatcaaa gcggggaaaa ggcggaacgc atcctcgtcc aagccggcat
     1141 cctcgacgcg ttgaaaccgc ggctcaggat cgttcccgcg caggcggcga gccaggagct
     1201 catcgccaag ggcgaggtgg agatgggctt gtataacgtc agcgaaatcc ctgagggcaa
     1261 ggggctggca ttcgccggtt cggtgccgaa gctgttgcag gtcgcgacca gctacgaggg
     1321 cgccttgatg tcggacggcg cggtgccgga agcggcgcgt gcgttcatcc gctttctcgc
     1381 cggccccgac gcgcgcgcca agtggctcgc cgccaagctc gaaccgtcgg ccgaccatta
     1441 ggcagcccgg ctcactcctg catcgcctct tcgcgcctgg cccgcagcgc cggtagcgcg
     1501 atcgcgagaa gcagcgcaag cgcggccaat aggaagccgg cggagatggg ccgcgtgatt
     1561 aacaccgtgg gatcgccaaa cgagatcatc atcgcgcggc gcaggttctc ctccatcatc
     1621 ggcccgagga tgaatccgag caccatgggc gcgggctcgc aatcgagttt gagcagcacg
     1681 tagccgagcg ccgacagcgc ggcgagcgca tagacgtcga agattttgtt gtcgacggca
     1741 taggcgccga tgcagcagaa cacgaagatc gcgggaaaca gcagccggta gggcaccgcg
     1801 agcagcttga tccacactcc gaccagcggc aagttgagca cgagcagcat gaggttgccg
     1861 atccacatgc tcgcgatcag accccagaac agttcagggc gttcggtcat cacctgcggg
     1921 ccgggggcga taccctggat catcagcgcg ccgatcatca gcgccatagt cggattcgag
     1981 gggatgccga gggtgagcat cgggatgaac gaggtctgcg cgccagcatt gttggcggat
     2041 tcgggcgccg ccacgccgcg gatgtcgccc tcgccgaacg cgcgcggcgg tttagcgatc
     2101 ttcttctcga ccatgtaggc tgcgaacgag gcgagcagcg cgccgccgcc tggtagcacc
     2161 ccgagcaacg agcccagcgc ggtgccgcgc gcgatcgacc agaagcaggc acgcaggtcc
     2221 gcgagtgtgg gca
//
LOCUS       DATCWM010000066         2020 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_200277, whole genome shotgun sequence.
ACCESSION   DATCWM010000066 DATCWM010000000
VERSION     DATCWM010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2020
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200277"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(112..696)
                     /locus_tag="VIQ50_01205"
     CDS             complement(112..696)
                     /locus_tag="VIQ50_01205"
                     /inference="COORDINATES: protein motif:HMM:NF012787.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEY9359022.1"
                     /translation="MAAGGFRSLWRLTVLRGWLVRASLLVGLCITGASGNAEDGKPTG
                     NTTLAALVDSPQSSFALPSLDGPALELAQLRGRIVLIHFFATWCEPCRAEMASLRDLQ
                     VRLGGRPVAIVPISVAEADGAVRRFFAGESLPFAVLLDRDRSVARAWGIHTLPSTVVL
                     DRTLKPRFMAEGDVDWARPDVMKILSDLLIEVPG"
     gene            complement(842..1894)
                     /locus_tag="VIQ50_01210"
     CDS             complement(842..1894)
                     /locus_tag="VIQ50_01210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0104 family protein"
                     /protein_id="HEY9359023.1"
                     /translation="MLDALHRAAVFCDQKVGWNRIGVTLSLTIIAIAAVVLYRILRTI
                     NAREVVEAVMATAPRDITLAAVFVACGYLTLTFYDLFALRTIGRTEVPYWGAALAAFT
                     SYAVGHNVGASVFTGGAVRYRVYSAWGLTAVEVAKICFVAGLTFWLGNATVLGLGIAY
                     APLAATAIDQLPAWLNRAGAVLILIVLALYVSWVWRRPRVVGREAWCVNLPGGPLTLL
                     QIVIGIVDLGFCALAMYMLVPDEPNIGFVTLAVIFVSATLLGFASHAPGGIGVFDAAM
                     LVALWQFDKEDVLAGLLLFRLLYYIVPFALSLLILGTRELVLLLRGTAPPPLEPIPSL
                     APTDVATSPEARREQA"
BASE COUNT          403 a          670 c          643 g          304 t
ORIGIN      
        1 cgcggcagtg ccgtggccgc cgccaatgcc gcgccgccgc gcaagaattc tcgtctcttc
       61 atgcgctctt ctcccgtgtt gagtgacttg ccgagtttgg atgccgcatc ttcagccggg
      121 tacctcgatg agcagatccg aaagtatctt catcacgtcg ggccgcgccc aatcgacgtc
      181 gccttcggcc atgaaacgag gtttcaaggt ccggtccagc acgacggtcg acggcaaggt
      241 gtggatgccc cacgccctcg cgaccgatcg gtcgcgatcg agcaaaaccg caaacggcaa
      301 cgactcgcct gcgaagaacc ggcgcaccgc tccgtcggcc tcggccacac tgataggcac
      361 gatggcgacg ggccgcccgc cgagccgcac ctgcaggtct cgcaagcttg ccatttccgc
      421 ccggcagggc tcgcaccagg tggcgaagaa atggatgagc acgatccggc cgcgaagctg
      481 cgcaagctcg agggccggac cgtcgaggct tggcagcgcg aacgaggatt gaggcgaatc
      541 gacgagagcc gcgagcgtgg tgttgccggt cggcttgccg tcctcggcgt tgcctgacgc
      601 cccggttatg cataggccga cgagaaggga tgcccgcacc agccagccac gcaacaccgt
      661 cagccgccac agggagcgga aaccgccagc agccatttcg agcatcatcg taagcaggat
      721 cggggcccgg gatcgccgac cattactgcg gccgcgcacg agcgtgtcaa taccgctcgg
      781 tgtgcttatc gccgatgtga tttcccgtga gttcctcgcg tgagatcgac ccgctgagct
      841 cctaagcttg ctcccgccgc gcttccggcg aggttgccac gtcggtcggc gccagcgacg
      901 gaatcggctc gagcggcggc ggagcggtgc cgcgcagcag caggacgagt tcgcgggtgc
      961 cgaggatcag gagcgaaagc gcaaatggaa cgatgtagta gagcaaccga aacaagagca
     1021 gcccggcgag cacatcttcc ttatcgaatt gccacagcgc gaccagcatg gcggcgtcga
     1081 acacgccgat tcctcccggc gcatggctcg caaagccgag cagcgtggcg gagacgaaaa
     1141 tgacggcaag ggtgacgaag ccgatattcg gctcgtcggg aaccagcatg tacattgcga
     1201 gcgcacagaa gccgagatcg acgatgccga tgacgatctg cagcagggtc agcggcccgc
     1261 ccggcaagtt cacacaccac gcctcacgcc cgacgacgcg cggacggcgc catacccagc
     1321 tgacgtacag cgccagcaca atcaggatca gcaccgcgcc cgcgcggttt aaccatgccg
     1381 gcaactggtc gatcgccgtc gcggcgagcg gcgcataggc gatgcccagc cccaacacgg
     1441 tcgcgttccc gagccagaac gtcagcccgg ccacgaagca gattttggct acctcgacgg
     1501 cggtgagccc ccaggccgaa tagacgcggt agcgaaccgc gccgccggtg aacacgctcg
     1561 cccctacatt gtggccgacc gcgtagctgg tgaaggcggc gagcgcggcg ccccagtagg
     1621 gcacctccgt gcgcccgatc gtgcgcagcg cgaaaagatc atagaacgtc agggtcaaat
     1681 atccgcaggc gacgaacacg gcggcaagcg tgatgtcgcg cggcgcggtg gccatcacgg
     1741 cttcgaccac ttcgcgggcg ttgatcgtgc gcaaaatccg atagagcacc accgccgcga
     1801 tggcgatgat ggtgagactg agtgtgaccc cgatccgatt ccagccgacc ttttggtcgc
     1861 agaacaccgc cgcccgatgc agcgcatcga gcacgcgatg ctcgcgatac tgaggttttg
     1921 gctccatcgg tcgacccgtc aaccggtttt ccgggaactt tggcatcccc accatatcgt
     1981 cgttgcaacc tgcgatgtcc aatggcgggt tgcagcgcca
//
LOCUS       DATCWM010000067         3444 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_650, whole genome shotgun sequence.
ACCESSION   DATCWM010000067 DATCWM010000000
VERSION     DATCWM010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3444
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_650"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..447)
                     /locus_tag="VIQ50_01215"
     CDS             complement(<1..447)
                     /locus_tag="VIQ50_01215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359024.1"
                     /translation="MIILRLICALAAASALTTTSLAQAPRSPWPPGDEIGMANTLGPA
                     TWQRCATYLADPKAKSYELSHLRSNTMPQSPFGVPLRDRYRPTVGIAGTRHAFNGEET
                     VSGEAGAQGTQMDAIGHFAVLPEAWDGKGEFPAGKARYYGGYTQADV"
     gene            731..1420
                     /locus_tag="VIQ50_01220"
     CDS             731..1420
                     /locus_tag="VIQ50_01220"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEY9359025.1"
                     /translation="MPEIGLFDAMYSARALRRLKPDPVPQEIITRILDAAIRAPSAGN
                     AQNWAFIVVRDAEQRRRLGMIYRKASDIASEVYKARGRPPHMSDEQYRRFLTSGAYLW
                     DHMGDAPVLLVPCLHDRPPPPRETLPPSVQAIYAGELAYEQRIRGASIYPAVQNIILA
                     CRAFGLGTVITTNHIRCEDEVKELLRLPSDVSTYALMPIGYPQGKFGPLARRPVAEVA
                     HADRWGAAWPT"
     gene            1678..2640
                     /locus_tag="VIQ50_01225"
     CDS             1678..2640
                     /locus_tag="VIQ50_01225"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase family protein"
                     /protein_id="HEY9359026.1"
                     /translation="MFGARAGVRYQFTLSSSLLRGLVASVSIAAQMMLAACSGGPPAS
                     SGRHLQPLSDRMLATLKAKHMDKESPILIRVFKEEAELEVWKQDDSGRFALLSTYPIC
                     RWSGELGPKFKTGDRQAPEGFYTITPGLMNPDSSQYLAINTGFPNAYDRANGRTGAFL
                     MIHGGCSSAGCYAMTDEQIAEIYALAREAFFGGQKSFQLQAYPFRMTPLNIARHRDSP
                     HMPFWKMIKQGYDHFEVTHLEPKVDVCEKSYVFDAEAAESFNSAGRCPFYRVREDVAL
                     AVREKQRRDDTEIVALINRGTPTVPVTTGGNGGMNATFLAAEAQ"
     gene            complement(2713..3168)
                     /locus_tag="VIQ50_01230"
     CDS             complement(2713..3168)
                     /locus_tag="VIQ50_01230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014332508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEY9359027.1"
                     /translation="MQEALVVRRETHISAPPAAVFALLTDPQKILRWMGTQAQVEPQP
                     GGLYLVNVTGARFARGSFREVVPVHRLAYSFGWDGSETVPPGSSLVEIDLIEQPGGTL
                     LRLTHTGLPSTEQCAGHAEGWAHYLGRLAEVAAGRDPGPDPWHGRTGTQ"
     gene            3333..>3444
                     /locus_tag="VIQ50_01235"
     CDS             3333..>3444
                     /locus_tag="VIQ50_01235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020050674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEY9359028.1"
                     /translation="MDLPAPIAWLVDEACASAAPELFLAELGGLLLADGLP"
BASE COUNT          568 a         1123 c         1127 g          626 t
ORIGIN      
        1 cacgtcggct tgcgtgtagc cgccgtaata gcgtgcctta ccagcgggga attcgccctt
       61 gccgtcccac gcctcgggca gaacggcgaa atggccgatc gcatccattt gcgtgccctg
      121 cgctccggcc tccccgctca cggtttcctc gccgttgaag gcgtggcgcg tgcctgcgat
      181 tccgaccgtg ggcctatacc tgtcccgcag cggcacgccg aacggcgatt gcggcattgt
      241 gttcgagcgc aagtgcgaga gctcgtagga cttcgccttg ggatcggcaa gataggtcgc
      301 gcagcgctgc cacgtcgccg gcccgagcgt gttggccatt ccgatctcgt cgccgggcgg
      361 ccaaggcgag cgcggcgcct gcgctagaga tgtggtcgtc aatgcgctcg cggcggcgag
      421 cgcacagatc agtcgcagaa tgatcattga tcgcatcctc gattttgatg gcgcgtcggc
      481 gccggcgtgt ccgcatccca cctgtgagcg cggtgagctt gtcacggatc gttccgactg
      541 ggggcgctgt ccgcgccgtc tgtgcgtccg tgggaaggat agcatacccg cgccgaaaga
      601 ggtggccgcg ctggcgggcc tattgcttcc gcaatttttc ccaccggcgg gcagcgcgat
      661 cgtacgatgt tgcgtctatg gcgcagctcg gtaggctccg gaacgaattc aatgcgtgtg
      721 agaacccgtc atgcctgaga tcggcttgtt cgatgccatg tactctgcgc gggcgttgcg
      781 ccgactcaaa cccgacccag tgccgcagga gatcatcacc cgcattctcg atgctgccat
      841 tcgcgcgcct tcggccggca atgcgcagaa ctgggcgttc atcgtggtgc gcgacgcgga
      901 gcaacgccgc cggctgggca tgatctaccg caaggcctcc gacatcgcga gcgaggtcta
      961 caaggcgcgc gggcgcccgc cgcatatgag cgatgagcag tatcggcgct ttctgacgtc
     1021 cggcgcgtat ttgtgggacc acatgggcga cgcgccggtg ctgctggtcc cctgtttgca
     1081 cgaccgtcca ccgccgccgc gcgagacgct cccaccatcg gtgcaagcga tctatgcggg
     1141 agagctcgcc tacgagcagc ggattcgcgg cgccagcatc tatccggcgg tgcagaacat
     1201 catcctggcg tgccgcgcgt tcggactggg caccgtgatc acgaccaacc acatccgttg
     1261 tgaggacgaa gtgaaggaac tgctccgcct gccatccgac gtgtcgacct atgcattgat
     1321 gccgatcggc tatccgcagg gaaaatttgg tccgctcgcg cgcaggccag tggccgaggt
     1381 ggcgcatgcg gatcgctggg gcgccgcttg gccgacttga tcgaacgctt ggttctggac
     1441 gcatcgtgcc ggggtccgca gcgaagtgcg taatcccaga ccgcctcggg gtatccgatt
     1501 gccgttgagg cgatacccgc agccctcgca cggttgacga aaggtgaagc cgatcgattg
     1561 tgcgctcggc ggcagtgcag gaatcgcggg gtaagctttt gttttccaac agaccctgaa
     1621 ttgcgccgct gccggccact gccctgatct cacccaagtc ccggcctagc ctgtcgcatg
     1681 ttcggggcca gggcgggcgt gcgttaccaa ttcactcttt catcatctct cctgcgtggg
     1741 cttgtggcgt cggtttcgat cgccgcgcag atgatgcttg ccgcgtgctc cggcggcccg
     1801 ccggcatcga gcggccgcca cctgcaacca ctctcggacc gcatgctggc cacgctcaaa
     1861 gccaagcaca tggataagga atcgccgatc ctgatacgcg tgttcaagga ggaggccgag
     1921 ctcgaggttt ggaagcagga cgacagcggg cgctttgccc tgcttagcac ctatccgatc
     1981 tgccgctggt cgggcgagct gggtcccaag ttcaagaccg gcgaccgcca ggcgccggag
     2041 ggcttctaca ccatcacccc cggcctgatg aatcccgatt ccagccagta tctcgcgatc
     2101 aataccggtt tcccgaatgc atacgatcga gcgaatgggc gcaccggtgc gttcctcatg
     2161 atccacggcg gctgctcgtc ggccggctgc tacgccatga ccgacgagca gatcgcagaa
     2221 atctacgcgc tcgcccgcga ggcattcttc ggcggccaga agtcgttcca actgcaggcc
     2281 tatccgttcc ggatgacgcc gctcaacatc gcccgccacc gcgattcccc gcacatgcca
     2341 ttctggaaaa tgatcaagca gggctatgac catttcgagg tcacgcacct cgaacccaag
     2401 gtcgacgtct gcgagaagag ctacgtgttt gacgcggagg cggcggaaag cttcaattcc
     2461 gccgggcgtt gtccgttcta tcgggtgcgc gaggacgtcg cgctcgcggt acgcgaaaag
     2521 cagcgccgtg acgacactga aatcgtggcg ctgatcaacc gcggcactcc gacggtgccg
     2581 gtgacgaccg gcggcaacgg tggcatgaac gcgaccttcc tcgcggccga ggcgcagtga
     2641 gcggcaccgc cttgggcact atcccggcgc aggtcaatac tccggcgggc ggcggcgacg
     2701 actagggcga tctcactgcg taccggtgcg gccgtgccac gggtctgggc ccgggtcgcg
     2761 cccggctgca acctccgcga ggcggcccag gtaatgcgcc cagccttccg catggccggc
     2821 gcattgctcg gtactgggca ggcccgtatg ggtgagccgc aggagcgtcc cgcccggctg
     2881 ctcgatcagg tcgatctcga ccagactcga ccccggcggc accgtctcgc tgccgtccca
     2941 gccaaagctg taggccagtc ggtgcaccgg cacgacctcg cggaaggaac cgcgggcgaa
     3001 gcgagccccg gtgacgttga cgagatagag cccgccgggc tgtggttcga cctgcgcctg
     3061 cgttcccatc cagcgcagga tcttctgcgg atcggtgagg agggcgaaca ccgcggcggg
     3121 cggcgccgag atgtgcgtct cgcggcggac gacgagggcc tcttgcatcg gtcgctcctt
     3181 ggtatcgttc cgcgttcgtc tcgatagacg tgctcgagat agattggcgc cgcgcatcga
     3241 acagtgacaa ctatggcagg attcagattg agcttgctca taagtgtcgg ggcgcggatg
     3301 acagcccagg gccgcggcag catgatcgcc gcatggatct gcccgcgccc atcgcctggc
     3361 tggtggacga ggcgtgcgcc tcggccgctc ctgagctgtt cttggccgaa ctcggcggac
     3421 tgctgctagc tgacggcttg ccgc
//
LOCUS       DATCWM010000068         2133 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_324485, whole genome shotgun sequence.
ACCESSION   DATCWM010000068 DATCWM010000000
VERSION     DATCWM010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2133
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_324485"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..220)
                     /locus_tag="VIQ50_01240"
     CDS             complement(<1..220)
                     /locus_tag="VIQ50_01240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359029.1"
                     /translation="MDAMAPPKPKVLFEAEPFIPYMREEDFDSRLKPVVEPYKKRMGF
                     LPNALKLYAHRPEIAETLWKLNSNVMRDP"
     gene            complement(233..1642)
                     /locus_tag="VIQ50_01245"
     CDS             complement(233..1642)
                     /locus_tag="VIQ50_01245"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HEY9359030.1"
                     /translation="MALSISHRPPPPTKPPDPSLRGYLDSNADIVTRVTKPVHMADIG
                     ALSAQSDQPILFENIIEKPNFRLCDILVKTRRSQARALGTSPENYLRTLAYRLRQPPR
                     GFNIVKSAPVKEVVKLHNEADWTELPIPFHKDKDEAPYVTAMNIIRDPETGFYNSCHA
                     GTHAVGPRRGLISFVTPHSHVVMRKYRDMGMDAMPIAFVFGVPPAYEIMANFSGLHMD
                     AWGEMEMVGTIMDRDIDMVPCETLELNVPAEAEIVVEGRINLKDRFKVGEVTSPSMYN
                     LPHYENLPEVEISAITMRADRPIYRNHQTCPDTDHQPLPRLCHEAVLYNRLSETGLDV
                     KDVRFPTWGAALSCIIQFSYPREGMVNDALMLAMGAPWLNTKLVVAVSPDTDLDDPGD
                     VYHAIATRCDPARDVIVVPNTRGSPYDPSARPLEGQYPWRIVGKMGIDATIKSRHDPA
                     DFERAWPRNWGKVKLSDYL"
     gene            complement(1757..>2133)
                     /locus_tag="VIQ50_01250"
     CDS             complement(1757..>2133)
                     /locus_tag="VIQ50_01250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359031.1"
                     /translation="RRTVYRRLLGFTLIVQTVLGLIALIVPVWLARSANLPGPPPAGW
                     VQLWGVMLLITASLYLPGWIEPLHVRLPNIVGIIARFALAIAYVSLGRGLRWFALYEL
                     IFAVALAWSYRALLRADLMSRP"
BASE COUNT          384 a          623 c          735 g          391 t
ORIGIN      
        1 tcgggtcgcg catgacgttg ctgttgagct tccacagcgt ctcggcgatc tcgggccgat
       61 gcgcgtagag cttgagcgca ttcggtagga accccatgcg cttcttgtag ggctcgacca
      121 cgggcttgag gcgggaatcg aaatcctcct cgcgcatgta agggatgaac ggctcggctt
      181 cgaacaggac cttcggtttg ggcggggcca tagcatccat gacaagtctc cttcagaggt
      241 agtcggaaag cttgaccttg ccccagttgc ggggccaggc gcgttcgaaa tcagcgggat
      301 cgtggcgcga cttgatggtg gcatcgatgc ccatcttgcc gacgatgcgc caaggatatt
      361 gcccttcgag cgggcgtgcc gacgggtcgt acggcgagcc gcgcgtgttc ggcaccacga
      421 tgacgtcgcg cgcaggatcg cagcgcgtcg caatggcgtg ataaacgtcg cccggatcgt
      481 ccagatcggt atcgggagag acggcgacga cgagcttggt gttcagccac ggcgcgccca
      541 tggccagcat caacgcatcg ttgaccatgc cctcgcgcgg atagctgaac tggatgatgc
      601 aggagagcgc ggcgccccag gtcgggaagc gcacgtcctt gacgtcaagg ccggtctcgc
      661 tgagccgatt gtacagcacc gcctcgtgac agagccgcgg caacggctga tggtcggtat
      721 cggggcaggt ctggtggttg cggtagatcg ggcggtcggc gcgcatggtg atcgcgctga
      781 tctcgacctc cggcagattc tcatagtgcg gcaagttgta catcgacggc gaggtgactt
      841 cgccgacttt gaacctgtcc ttcaggttga tacggccttc caccacgatc tcggcttccg
      901 ccggcacgtt cagctccagc gtctcgcacg gcaccatgtc gatgtcgcgg tccatgatcg
      961 tgccgaccat ttccatctcg ccccatgcgt ccatgtgcag gccggagaag ttcgccatga
     1021 tttcgtaagc cggcggcacg ccgaagacga acgcgatggg catcgcgtcc atgcccatgt
     1081 cgcggtattt gcgcatgacg acgtgcgaat gcggcgtgac gaagctgatc aatccacggc
     1141 gcggcccgac cgcgtgggtg ccggcgtgac aggagttgta aaagccggtc tcggggtcgc
     1201 ggatgatgtt catcgccgtg acatacggcg cctcgtcctt gtccttgtga aaggggatgg
     1261 gcagctcggt ccaatcggcc tcgttgtgca gcttgaccac ctcttttacc ggggcagact
     1321 tgacgatgtt gaacccgcgc gggggctggc gcagccggta ggcaagggtg cgcagatagt
     1381 tctcgggcga agtgccgagc gcgcgcgcct gcgagcggcg ggtcttgacc aagatatcgc
     1441 acaatcgaaa gttgggcttc tcgatgatgt tctcgaacaa gatgggttgg tcgctctgcg
     1501 ccgacagcgc gccgatgtcg gccatgtgga ccggcttggt gacgcgggtg acgatgtcag
     1561 cgttgctgtc aagatagccg cgcagcgagg ggtcgggcgg cttggtcggc ggcggcggcc
     1621 gatgacttat ggagagcgcc atcgcgggtc ctccatttct ttaagtaact ttactaatta
     1681 gcttaggggt gtcaaggcac gcgtccgggc gggcgcccgg cgcggaattc gcagcgagta
     1741 gcgcggtgcg gcgtatctag gggcgcgaca tgaggtcggc gcgcaacaat gcgcggtagc
     1801 tccacgccag cgccactgcg aatatcagct catagagcgc aaaccaccgc aggcctcggc
     1861 cgaggctgac gtaggcgatc gccagggcga agcgtgcgat gatgccgacg atgttcggca
     1921 aacgcacgtg caacggctcg atccaacccg gcagatagag gctcgccgtg atcagcagca
     1981 tgactcccca cagttgcacc cagccggccg ggggcgggcc gggcagattg gcgctgcgcg
     2041 cgagccaaac cggcacgatg agggcgatga ggccgagcac cgtctgcacg atgagggtaa
     2101 agcccagcag gcggcgatag acggtgcgcc gcg
//
LOCUS       DATCWM010000069         2976 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_518790, whole genome shotgun sequence.
ACCESSION   DATCWM010000069 DATCWM010000000
VERSION     DATCWM010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2976)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2976)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2976
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_518790"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..151)
                     /locus_tag="VIQ50_01255"
     CDS             complement(<1..151)
                     /locus_tag="VIQ50_01255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012555172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9359032.1"
                     /translation="MTDRPKPPFPPQKQAMPGLTRKMHPVPDHGEKTYKGAARLAGKK
                     AIVTGG"
     gene            complement(391..1536)
                     /locus_tag="VIQ50_01260"
     CDS             complement(391..1536)
                     /locus_tag="VIQ50_01260"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012631348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEY9359033.1"
                     /translation="MTKTFSVRLAARAESVALSQPSLDLQCAQLSNQVARVAFAVPGD
                     LATPTGGYRYDRRMIQELRRLGWQVDVFDLGDGFPFPTAAQRATALLILSAVPGSCPI
                     VLDGLAFGALPEAGALRSRRPLIALVHQPLALESGLHTAQADIFRESERTALAAAARV
                     VVTSEATGRIVVAEYSVQSQRLSVVRPGNDPVPPARGSGDDVVRLLSVGSVVPGKGYD
                     LLIAALATIADLPWRLTIAGDRTRNLAAAARLDADISAHRLGKRVAVLGAVAPERILE
                     LYLTSDAFVLASRFEGYGMALAEAIAHGLPVVSTTAGAIPDTIPAGAGLLVPPNDVAA
                     LAQALQRLIGDQAERQRLAINARAAAAQLPTWQDSARLFVGAIDMVR"
     gene            complement(1854..>2976)
                     /locus_tag="VIQ50_01265"
     CDS             complement(1854..>2976)
                     /locus_tag="VIQ50_01265"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012653202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEY9359034.1"
                     /translation="AAAAYFLRSHPRACRVAVIERDTSYQLASTPRASGGVRRLVSLP
                     ENIALSNYSIPFFERFDSEMAVDGEPAAINFRKGGYLFIVPPAAVRVLERNLEIQKAS
                     GVRIEWLERKDLKARFPSMNVDDLGAGVLSPDDGWLDPHGVLQGLRKKAQALGAEFVN
                     DEVVGLDVERRRLRAIRLKSGGTIQADAVINAAGAWAKEICAMAGWTVPIEPMRRYEH
                     YFETAEAIEPLPYIKDVHRLAFRPEGKGYSGGVPNLDEPRGYNFDVDHDYFQQVVWSA
                     LAARFPQFERTKEKNTMSGLYDQNEFDATPIVGPWTGKLDNFYLMAGFSGHGLMHAPG
                     CGRAIAELILDGSYQTIDLSRFGWARIAAGRQCAEKGIV"
BASE COUNT          573 a          951 c          910 g          542 t
ORIGIN      
        1 cgccgccggt cacgattgcc tttttacccg ccagccgcgc agcacctttg taggttttct
       61 caccgtgatc aggcacagga tgcatcttcc tggtcaggcc gggcatcgcc tgcttttgcg
      121 ggggaaatgg tggcttcgga cgatccgtca ttttctttct cctgcgcgcc gtagtgaccg
      181 agatagcggc tatttctcaa accgaggccg agagaatagg ttcctggggc gaatgcatta
      241 gagggcgcat gtgcaactga tctcgtgagc acgagcgcag cggctcaagt cggcatccaa
      301 acacacgctc gaactcgact gccgcatcgg cgtgcatagg ctcgatcaat ttcacgtaga
      361 cccccgccaa cccgtgcgcg gaaaagccgc ttatcggacc atatcgattg cgccgacaaa
      421 aagccgggca gaatcttgcc aagtcgggag ctgcgccgct gccgcacgag cgttgatcgc
      481 gagccgctgt cgttcggcct gatcgccgat taggcgttgc agcgcctgcg cgagcgcggc
      541 gacatcgttc ggcggcacta gcagaccggc gccggccggt atcgtgtcgg ggattgcgcc
      601 cgccgtggtg gacacgaccg gcagcccgtg ggcgatcgct tcggccagcg ccatgccata
      661 cccctcgaaa cgcgacgcga gcacaaacgc gtcggatgtc aaatacagct cgaggatacg
      721 ctcaggcgcg acggcgccca gcaccgcaac ccttttgccg agacggtggg ccgagatgtc
      781 ggcatcgagc cgcgcagccg cggccaggtt gcgggtccgg tcaccagcga tggtcagccg
      841 ccaaggcagg tcggcaatcg tagcaagtgc cgctatcagc agatcgtatc ctttgcccgg
      901 cacgaccgat cccaccgaga gaagccgaac aacgtcgtcg ccgctgccac gcgccggcgg
      961 cacggggtca ttacctggtc gcacaacgct gaggcgctga gactggacgc tgtactcagc
     1021 gaccacgatc cgcccggttg cctcgctcgt gaccacgacg cgcgcggcag cggcaagcgc
     1081 ggtgcgctcg ctctcgcgaa agatgtccgc ctgcgcagtg tggagaccgg attccagagc
     1141 aagcggttgg tgcaccaggg cgatgagcgg ccggcgagat cggagcgcgc cggcctcggg
     1201 cagggccccg aaggcaagcc catcgaggac gatcggacag ctgcccggaa ccgcggacag
     1261 tatcagcagc gccgtcgcac gctgcgcggc ggtagggaac ggaaagccgt ctcccaagtc
     1321 gaagacatcc acctgccaac ccagccgccg cagctcctgg atcatgcgcc ggtcataacg
     1381 ataacctccg gtcggcgtgg cgagatcacc cggtacggcg aacgcaacgc gcgcgacttg
     1441 gttagaaagc tgcgcacact gcagatccag cgatggttgc gaaagcgcga cggattccgc
     1501 gcgagcggca agccgaacac taaacgtctt tgtcacggtg cacgcctctt gccgggccgg
     1561 cttctttgcc cgcggacaag gagatgagga gtggcgttta atcgcggcca agcaatttca
     1621 cgctgcccat cgctcattcg ttaacgggtc cgaaacgggg aaagtttgta aacggttccc
     1681 tttgggccca actttttgcg tgaaaatctt acggttgagt cgggtggctg accgttcgcg
     1741 cacaggagcg cgtcatgcgg atagcccgtt tcatcgatat agcgtgtcgc tgacctgtgt
     1801 ggctgctggc gctggagtca ttcggccgcg acttttcaac gcatcagaat agctcaaaca
     1861 attccttttt cggcgcattg ccggccagcg gcaattcgcg cccagccgaa acgagaaaga
     1921 tcgatcgtct gatagctccc atccaggatc agttcggcga tcgcccggcc gcagcccggc
     1981 gcatgcatca ggccatgccc ggaaaaaccc gccatgagat aaaaattgtc gagctttccc
     2041 gtccacggcc cgacgatcgg cgtggcgtcg aactcgttct gatcgtagag gcccgacatc
     2101 gtgttctttt cttttgttcg ctcgaactgg gggaagcgag cggccagcgc cgaccagaca
     2161 acctgctgga aataatcgtg gtcgacgtcg aagttgtatc ctctcggctc gtcgaggttc
     2221 ggcacgcccc cggaatagcc ttttccctcc gggcgaaatg ccaaccgatg cacatccttg
     2281 atgtacggca acggctcgat cgcttccgct gtttcgaagt agtgctcgta gcgtcgcatc
     2341 ggctcgattg ggaccgtcca tcccgccatt gcgcagatct cttttgccca ggcgcctgcg
     2401 gcgttgatga ccgcgtcggc ttgtatagtc cccccggatt tcagccgaat cgcgcgcagc
     2461 cgccgtcgtt cgacatctaa cccgacgact tcgtcgttga cgaactccgc gccgagcgcc
     2521 tgcgctttct ttcgcaagcc ttgcagcacc ccatgggggt cgagccaacc gtcatcgggt
     2581 gaaagaacgc ccgcgccaag gtcgtctaca ttcatcgagg gaaacctcgc cttcaggtcc
     2641 tttcgctcca accattcgat gcgcactccg ctcgcctttt ggatctcaag gttgcgttcg
     2701 agcacgcgca cggcggccgg aggaacgatg aaaaggtagc cgcccttgcg aaagttgatc
     2761 gcggccggct cgccatcgac cgccatctcc gaatcgaagc gctcaaaaaa cggaatgctg
     2821 tagttggaga gcgcgatatt ctcgggaagc gaaaccagcc gccgcacgcc gcccgatgca
     2881 cgcggcgtcg acgccagctg atagctggtg tcgcgctcga tgaccgcgac acgacacgct
     2941 cggggatggc tgcgcaggaa gtaggcggcg gcggct
//
LOCUS       DATCWM010000070         2188 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_140884, whole genome shotgun sequence.
ACCESSION   DATCWM010000070 DATCWM010000000
VERSION     DATCWM010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2188
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140884"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(40..795)
                     /locus_tag="VIQ50_01270"
     CDS             complement(40..795)
                     /locus_tag="VIQ50_01270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006051218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY9359035.1"
                     /translation="MKIVVIGGTGLIGSKSVAILRQGGHEAIAASPKSGINSITGEGL
                     KEAMAGAQVVIDLANSPSFEDKAVLEFFETSGRNLRAAETAASVRHHVALSIVGTDRT
                     TENGYFRAKVAQEKLIETSGIPYTIIRSTQFMEFLGGIAAASTVGNVVRLSPGLFQPI
                     AADDVAAIVADVALAAPRNSIVEIVGPERAPFNEIVARYLKAVGDPREVVSDPEARYF
                     GGRVEEHSLVPLGEARLGRIGFDEWLRRSQARA"
     gene            complement(999..>2188)
                     /gene="guaA"
                     /locus_tag="VIQ50_01275"
     CDS             complement(999..>2188)
                     /gene="guaA"
                     /locus_tag="VIQ50_01275"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HEY9359036.1"
                     /translation="WRKGERYPVWMSHGDRVTRLPPGFRVVGTSPNAPIAMIVDEHRR
                     FYATQFHLEVVHTPHGAALIRNFVRKIAGCRGDWTMRAFKAEAVDKIRAQVGKGRVIC
                     GLSGGVDSAVAAVLIHEAIGEQLTCVFVDHGLLRLAEAEKVVALFRDSYNIPLVHVEA
                     EALFLEALAGVTDPELKRKTIGRLFIDVFEAEAKKLGGADFLAQGTLYPDVIESVSFT
                     GGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRALGRELGLPQAFVGRHPFPGP
                     GLAIRCPGEITREKLDILRRADDIYIEEIRRAGLYDDIWQAFAVLLPVRTVGVMGDYR
                     TYDYVVGLRAVTSTDGMTADFYPFDMKFIGHVATRIVNEVKGVNRVVYDITSKPPGTI
                     EWE"
BASE COUNT          395 a          690 c          701 g          402 t
ORIGIN      
        1 cgtgacagga gaatccctgg gcgtacctcc gatgcgggat caggctcgtg cctgtgagcg
       61 gcggagccat tcgtcgaaac cgatgcggcc gaggcgcgcc tcgcccaacg gcacgagcga
      121 gtgctcctcg acccggccgc cgaagtatcg ggcctcgggg tcgctgacga cctcacgcgg
      181 gtcgccgact gcctttagat agcgggcgac gatttcgttg aacggtgctc gttccgggcc
      241 gacgatctcg acgatgctgt ttcgcggcgc cgccagcgcg acatcggcaa cgatggctgc
      301 aacatcgtcc gccgcgatgg gctggaacag gccgggcgaa agcctgacaa cgtttccaac
      361 ggtacttgca gcagcgatgc ccccgaggaa ttccatgaac tgggtcgagc ggatgatggt
      421 gtaggggatg ccggaggtct cgatcagttt ctcctgggcg accttggcgc ggaaataacc
      481 attttcggtc gtccggtcgg tcccgacgat ggatagcgcg acatggtgcc gcacgctcgc
      541 cgcggtctct gccgcgcgaa ggttgcggcc ggaggtctcg aagaattcca gcaccgcttt
      601 gtcttcaaat gagggcgaat tggcgaggtc gatcaccacc tgcgcaccgg ccatggcctc
      661 cttgagcccc tcgccggtga tgctgttgat accgcttttg ggcgaagcgg cgatggcctc
      721 gtggccgccc tggcgcagaa tggcgacgct cttcgagccg attaggccgg tgccgccgat
      781 gacaacgatc ttcatcgtta ccccctactt ctcgatggct gcagaccctt aaatgggttc
      841 gaatgcgagt ggggacaacc cgagagcccg tcggtgggag ccgcaccgga aactgacgtc
      901 atctcgaacg cgcgaggcgc attgatgagg tgggtgagat cgcaaacgaa atgcgaatta
      961 ctttgtcttc ggtgagtttt ttccgaattt cttagttctc actcccactc gatcgtgccc
     1021 ggcggcttcg aggtgatgtc gtacacgacg cggttgaccc ccttcacctc attgacgatg
     1081 cgcgtcgcca cgtggccgat gaacttcatg tcgaagggat aaaagtcggc ggtcatccca
     1141 tcggtcgagg tcaccgcgcg cagcccgacg acgtaatcgt aggtgcgata atcgcccatg
     1201 acgccgacgg tgcgcaccgg cagcagcacg gcgaacgcct gccagatgtc gtcgtagagc
     1261 ccggcgcggc ggatctcttc gatatagatg tcatcggcac ggcgcaggat gtcgagcttt
     1321 tcccgcgtga tctcgccggg acagcggatg gcgagcccgg gtccgggaaa cgggtggcgg
     1381 ccgacgaagg cctgcggcaa accaagctcg cggccgagag cgcgcacctc gtccttgaac
     1441 agctcgcgca gcggctcgac cagcttcatg ttcatgcgct cgggcaatcc gccgacattg
     1501 tgatgggatt tgatggtgac tgacggcccg cccgtgaacg agacgctctc gatcacgtcg
     1561 gggtagagcg tgccttgcgc caggaaatcc gcaccgccga gttttttcgc ctccgcttcg
     1621 aacacatcga tgaacaggcg gccgatggtc ttgcgcttga gctcgggatc ggtgacgccg
     1681 gcaagcgcct cgagaaacag cgcttcggct tcgacatgga ccagcgggat attgtagctg
     1741 tcgcgaaaca gcgccaccac cttctccgcc tcggcgagcc gcagcaatcc gtggtcgacg
     1801 aaaacgcagg tgagctgctc gccgatcgcc tcatgaatca acacggccgc gaccgccgaa
     1861 tctaccccgc ccgacaatcc acagatcacc cgccccttgc cgacctgcgc gcggattttg
     1921 tcgactgcct ccgccttgaa cgcgcgcatg gtccagtcgc ccctgcagcc ggcgatcttg
     1981 cgcacgaagt tgcgaatgag cgcggcgcca tgcggcgtgt gcacaacctc gaggtggaat
     2041 tgcgtggcgt agaaccggcg gtgctcgtcc acgatcatgg cgatgggcgc gttcggcgag
     2101 gtgccgacca cgcggaagcc cgggggtaat cgcgtgacgc ggtcgccgtg gctcatccac
     2161 accggatagc gctcgccctt gcgccaca
//
LOCUS       DATCWM010000071         3961 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_313662, whole genome shotgun sequence.
ACCESSION   DATCWM010000071 DATCWM010000000
VERSION     DATCWM010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3961
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_313662"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..520
                     /locus_tag="VIQ50_01280"
     CDS             <1..520
                     /locus_tag="VIQ50_01280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008961616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HEY9359037.1"
                     /translation="PPAALQVVPGGSPWFHPGRSGTIQIGPQTVLGHFGELHPRALEA
                     LDAEGPLVAFEVMLEKIPEPKAKATRARPVLELSPFQPLERDFAFVVDRTVHATDVLG
                     AAQSADRKLITNVVVFDVYEGAGIEPSKKSIAISVTLQPREKTMTDAEIEAVAGKIVA
                     EVGKRTGGALRG"
     gene            complement(527..1885)
                     /locus_tag="VIQ50_01285"
     CDS             complement(527..1885)
                     /locus_tag="VIQ50_01285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY9359038.1"
                     /translation="MRHLTRRSFLASAAALTTAPALAAPAPAPEVPRSGWVDAVVVGA
                     GAAGIAAGRRLAAAGKRFVVLEAANEIGGRCITETRTFGVPYDRGAHWIYAADINPLM
                     KLAPQAGVEIYAAPPGQRMRIGRRYAREGEMEDFLASLVRANTAIADVARKSDIACTQ
                     ALPKDLGEWRPTVEFVLGPYGCSKELAEVSTADLSRAGERDNSAFCRQGFGTLLAKLA
                     ASLPILPATPVKSIEWWSRARIEVETPKGQFKTAAVILTVSTNVLTSGKIKMAPELPK
                     RHLEAASKLKLGSRDHVALELTGNPLGLRSDELVFERTESRQTAALFGNMSGSTICVI
                     DIGGSFGRDLSAKGEAAMIDFAISWLGGLYGTDIKNAVKRRHATRWNNEPWVLGAISA
                     AAPGAQSARKILAESISGRIFLAGEATHETRWGTVNGAWESGERAADAVVKLLGGPSK
                     RT"
     gene            2080..2790
                     /locus_tag="VIQ50_01290"
     CDS             2080..2790
                     /locus_tag="VIQ50_01290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008143996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate transporter family protein"
                     /protein_id="HEY9359039.1"
                     /translation="MIDAAVKALVQMFSPPFRWVLLKSSGLALGLIVLFAIALHRLLV
                     WLATAGANWVESMFGVSAPAPISIFVWVLSIAAGIGIIVGSVFLMPAVTALLGSFFVD
                     DIALEVERTHYPTEPVGTPLPLPRAVLQGAKTALLAILIYLIAVPFLLVAGAGAVIFF
                     LASAYLLGREYFELAAMRHQPIAQAKRLRQTHQSTVFLAGILIAAFVSIPIVNLATPL
                     FATALMVHVHHRIRTKDR"
     gene            complement(2831..>3961)
                     /locus_tag="VIQ50_01295"
     CDS             complement(2831..>3961)
                     /locus_tag="VIQ50_01295"
                     /inference="COORDINATES: protein motif:HMM:NF025714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4403 family protein"
                     /protein_id="HEY9359040.1"
                     /translation="GLLGGRLGQGLQNLQGKALDQRADIHGEVTLTAHPSLLPAWRVE
                     PNLSSQIALADASLPIMGVKLSVSNELKPFLDRAVNEQMAALAARLRDDPSLELAARR
                     EWAKMCRAISLGAAVAGMPNLWLEVRPTRAFAAQPRIDSTALTLTIGVEAQTRIVPNE
                     TKPDCPFPAQLELVPQAEQGRVNIAVPIDIPFTEVTRLLDAQLKGKSFPEDKGSAFTA
                     TIRGVNLAASGDRLLLSLRVRANENKSWLGLGAEATIYVWGRPVLDSAHQVLRLTDIA
                     LDVQSEAAFGLLGAAARPAVPYLEQAVAEHAVVDLVPLAANARQSIDAAISDFRKSAD
                     GVRVDAGISDLRLVDIEFDAKTLRVVAEVNGTAQVAVTKLGE"
BASE COUNT          661 a         1293 c         1265 g          742 t
ORIGIN      
        1 gccgccggcg gcgctccaag tcgtgccggg agggtcgcca tggttccatc cgggacgctc
       61 ggggacgatc caaattggcc cgcagaccgt cctcgggcat tttggagagc tgcatccgcg
      121 cgcgctcgaa gcgctcgacg ccgagggccc gctggtcgcc ttcgaggtga tgctggaaaa
      181 aatcccggaa ccgaaggcga aggcaacgcg cgcgcggccg gtgctggagc tttccccctt
      241 ccagccactc gagcgcgact tcgcctttgt cgtcgatcgc acggtgcacg cgaccgacgt
      301 gttgggcgcg gcacagagcg ccgatcgcaa actcatcacc aatgtcgtgg tgttcgacgt
      361 ctacgagggc gcggggatag agcccagcaa gaagtcgatc gccatcagcg tgacattgca
      421 gccgcgggaa aagaccatga ccgacgcaga gatcgaggcc gtggccggga agattgtcgc
      481 cgaggtcggc aagcgcaccg gcggcgcgtt gcgtgggtga cggtgctcac gtgcgcttgc
      541 ttgggccgcc aagcagcttc accaccgcat ccgccgctcg ctcacccgac tcccaggcgc
      601 cgttgacagt gccccaacgg gtctcatgcg tggcctcacc ggccaagaag atgcggccgc
      661 tgatcgactc ggccagtatc ttgcgcgcgg attgagctcc gggcgcagcg gcagagatgg
      721 cgccgagtac ccacggctcg ttgttccagc gtgtggcgtg gcgacgttta accgcgtttt
      781 ttatatccgt gccgtagaga ccgcccagcc agctgatcgc aaaatcgatc atcgccgcct
      841 cgcctttggc cgagagatcg cgcccgaaac ttcccccgat gtcgatgacg caaatcgtgg
      901 aacccgacat gttgccgaag agggccgcgg tctgcctgct ctcggttctc tcgaagacca
      961 gttcgtcgga acgcagcccg agcgggttgc cggtcaattc cagcgccacg tgatcgcggc
     1021 taccgagttt gagctttgag gcagcctcca gatggcgttt cggcaactcc ggtgccatct
     1081 tgatctttcc gctggtgagc acattggtcg agacggtgag gatgaccgcg gcggtcttga
     1141 attgcccctt gggcgtttcg acctcgatgc gggcgcggct ccaccattcg atcgacttga
     1201 ccggcgttgc cggaagaatt ggaagggaag ctgcgagctt cgccagtagg gtgccgaacc
     1261 cttgccggca gaatgcacta ttgtcgcgct cccccgcgcg ggaaagatca gcggtcgaca
     1321 cctccgcgag ctccttgctg cagccgtaag ggcccagcac gaattcgacg gtcggccgcc
     1381 attcgccgag atccttgggc agcgcctggg tgcaagcgat gtcgctcttg cgcgcgacgt
     1441 cggcgatggc tgtgttggca cgcacgaggc ttgcgagaaa gtcctccatc tctccttcgc
     1501 gggcataacg gcgtccgatg cgcatgcgct ggcctggcgg cgcggcgtag atctcgaccc
     1561 cggcctgcgg cgcgagcttc atcaacggat tgatgtctgc ggcatagatc cagtgggcgc
     1621 cgcgatcgta gggcacgcca aatgtcctgg tctcggtgat gcagcgcccg ccgatctcgt
     1681 tcgcggcctc gagcacgaca aatcgtttgc ccgctgcggc aagtcgtcgc cccgcggcga
     1741 tgccggcggc gccggcgccc acgacgacgg cgtcgaccca tccggagcgg ggcacctcgg
     1801 gggctggcgc cggcgctgca agcgcaggcg cggtagtgag cgccgcggcg gacgcaagga
     1861 acgatcggcg ggtcaaatgt cgcatgtgag cgcgcaagcg ttaggcgttt cgaggtctag
     1921 cacggaacgc gtgcctgcca tgtctaaatt ctttttcatc atcatcgcgg ttgcgctatc
     1981 gccgtcggcg gtgccccatt caataggcgc tcctatggag cgcctagttc cagggtcgct
     2041 gcaccgggca tcgcacggcc ggtagaaagg atgcagacga tgatcgacgc ggccgtcaaa
     2101 gcactcgtcc agatgttctc gcccccgttc cgctgggtgc tgttgaagtc ctccggcttg
     2161 gcgctcggcc tgatcgtgct gttcgcaatc gcacttcatc ggctgctagt ctggcttgcc
     2221 actgccggcg cgaattgggt cgagagcatg ttcggcgtca gcgcgcccgc accgatctcg
     2281 attttcgtct gggtcctttc cattgccgcg ggcatcggga tcatcgtcgg atcggtgttt
     2341 ttgatgccgg cggtcaccgc gctgctcggc agctttttcg tcgacgacat cgcgctcgaa
     2401 gtcgaacgca cgcactatcc cacggagcct gtcggcactc cgctgccact cccgcgcgcg
     2461 gtgctccagg gtgccaagac ggctttgctc gcaatcttga tctacctcat cgcggtgcca
     2521 ttcctgctag tcgccggcgc gggcgcggtc atttttttcc tagccagcgc ctatttgctc
     2581 ggccgcgaat atttcgagct cgccgccatg cgtcatcagc cgatcgccca ggccaaacgg
     2641 ctacggcaaa cccaccagag cacggtcttt ctcgccggca tcttgatcgc ggcgttcgtg
     2701 tctatcccaa tcgtcaatct cgccacaccg ctgttcgcca cggctctgat ggtgcatgtg
     2761 caccatcgca ttcgcacgaa agataggtga ggataatccg ccggcactcg gccgcctgag
     2821 cgggtttcgt ctattcgccc agcttcgtca cggcgacctg tgcggtgccg ttgacctccg
     2881 caaccacgcg cagcgttttg gcatcgaact cgatgtcgac gagacgcaga tcgctgatgc
     2941 cggcgtccac acgaacacca tcggcgctct tgcgaaaatc cgagatcgcc gcatcgatgc
     3001 tctggcgagc attggccgcg agcggcacca gatccacaac cgcatgctcc gcaaccgcct
     3061 gttccaagta tggcactgcg gggcgcgccg ctgcgcccag caagccgaaa gcggcctcgg
     3121 attggacatc cagcgcgatg tcggtcaggc ggagcacctg atgcgcggaa tcgagcaccg
     3181 gccgacccca gacgtagatc gtagcttcgg cgccgaggcc gagccagctc ttgttctcat
     3241 tggctctcac ccgcagcgac agcaacaagc gatcgccaga cgcggccaag ttgacgccgc
     3301 ggatcgtggc ggtaaaggcg ctgcccttgt cttcgggaaa gctcttcccc ttgagctgcg
     3361 cgtccagcag cctagtcacc tcggtaaacg ggatgtcgat cggcacggcg atattgacgc
     3421 ggccctgctc ggcctgcgga acgagctcca gttgcgccgg gaagggacaa tcgggcttag
     3481 tctcattagg gacaatgcgc gtttgggcct ctacgccgat cgttagcgtg agggcagtgg
     3541 agtcaatgcg gggctgcgcg gcgaaggcgc gggttggccg aacttccagc cacagattcg
     3601 gcatgccggc gaccgccgcg ccgagggaga tcgcccggca catcttggcc cactctcgcc
     3661 gcgccgccag ttcaagggac ggatcgtcgc gcaggcgcgc cgcgagtgct gccatttgtt
     3721 cgttgaccgc gcgatcgagg aagggcttga gctcgttcga cacgctcagc ttcacgccca
     3781 tgattggcag cgaggcgtcg gcgagcgcga tctgagaact caggttgggc tcaacccgcc
     3841 acgccggcag cagcgagggg tgcgccgtga gcgtgacttc gccgtggata tccgcacgtt
     3901 ggtcgagcgc ttttccctgc aggttctgca gcccttgtcc caaccgtccg cccagcagac
     3961 c
//
LOCUS       DATCWM010000072         2418 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_32861, whole genome shotgun sequence.
ACCESSION   DATCWM010000072 DATCWM010000000
VERSION     DATCWM010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2418)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2418)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2418
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32861"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(119..964)
                     /locus_tag="VIQ50_01300"
     CDS             complement(119..964)
                     /locus_tag="VIQ50_01300"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9359041.1"
                     /translation="MAGLEDTGGRVAEAARERSLYRWLQRAGWAFARVFSILALALAW
                     ELAARSGAFTPYMLPALSAVLERIWNDLFTGDLLTNTAVTLYRALSGFLIGAAAGVAL
                     GMGISRNRLTRWFFDPIISVGFPMPKIAFLPVVILWLGVYDVSKITMIAVEGVFPVVT
                     ATVVGIRGVERELLWSARNMGAGERELLWQIALPAALPQIITGLQVALPIALIVAIVT
                     EMFMGGYGLGGAMNTAARFADSRGVFAGIVEIAVIGYALVKGMTMMRRRLLLWHQEAV
                     APSTA"
     gene            complement(952..1695)
                     /locus_tag="VIQ50_01305"
     CDS             complement(952..1695)
                     /locus_tag="VIQ50_01305"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9359042.1"
                     /translation="MTAALLRYVPLLLLALAWEVGARSGLISALALPPLSSVLAAWVE
                     LLKDGELISNGAASLWRTGAGLTLAIVIGAGLGIFMAWWRTVNVLLSPLVEMFYPMPK
                     SALIPVTVLWLGFGNGSKILLIFLGCMLPVTIGAFNGARSSEQALVWSARSMGANRLR
                     MLWDVVVPSAMPELLNGVRTALALSFILLVSSELIAAREGLGYLIGFLGASGTYDAMF
                     AVVLTVALLGFVADRIYLVVMQRMLRWQG"
     gene            complement(1807..>2418)
                     /locus_tag="VIQ50_01310"
     CDS             complement(1807..>2418)
                     /locus_tag="VIQ50_01310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY9359043.1"
                     /translation="PTETGKILIEGKPIGAPGPDRGIVFQHFALFPWKTVRANVLYGL
                     ERMRLAREERERRAQSFIDLVGLNGFEDSYPSQLSGGMRQRTAIARTLAFDPKILLMD
                     EPFGALDAQTRSLMQSELLSIWQRTPKTVIFVTHDVQEAVYLADRVAVMSARPGRIKA
                     LVDTKFDKSDPAIFKNQGFIDKVDEIWNLVRIEAIKAQGGRHA"
BASE COUNT          480 a          817 c          754 g          367 t
ORIGIN      
        1 ctgttcatcg atacgagcgc gatcgacgcg tcctccgccg aacgcgtgcg ccggaccttg
       61 gaaaaggtcg ccgccgagtt gaagtttcgc agccgggcag cgcagtcgaa ttgaacgctc
      121 acgccgtgct cggcgccacc gcctcctggt gccacagcaa caggcgccgc cgcatcatcg
      181 tcatgccctt gaccagcgcg taaccgatca ccgcgatctc cacgatgcct gcgaacacgc
      241 cgcgggaatc ggcaaagcgc gcggcggtgt tcatcgcccc gcccaggccg tagcccccca
      301 tgaacatctc ggtcacgatg gcgacgatga gcgcaatggg gagcgccacc tgcagcccgg
      361 tgatgatttg cggcagcgcc gctggcaggg cgatctgcca caacagctcg cgctctcccg
      421 cgcccatatt gcgcgccgac cacaacagct cgcgttcgac cccgcggatg ccgacgaccg
      481 tcgcggtaac gacggggaac accccctcga cggcaatcat ggtgatcttc gacacgtcgt
      541 agacgccgag ccacaggatg accaccggca ggaaggcgat cttcggcatc gggaaaccga
      601 ccgagatgat cggatcgaag aaccacctgg tgagccgatt gcgggaaatg cccatgccca
      661 gcgctacgcc cgcggcagca ccgatcagaa agccgctcag cgcgcgatag agtgtcacgg
      721 cggtgttggt gaggaggtct ccggtaaaga ggtcgttcca gatccgctcc agcaccgcgc
      781 tcagcgccgg cagcatatat ggcgtgaacg cgcccgagcg cgccgcaagc tcccaagcga
      841 gcgcgagcgc aaggatggaa aacacccgcg caaaggccca accggctcgt tgcagccagc
      901 gatagagcga gcgctcgcgc gccgcttcag cgacccgtcc gccggtgtcc tctagccctg
      961 ccaccgcagc atccgttgca tgacgacgag gtaaatccgg tcggccacaa acccgagcaa
     1021 cgccaccgtg aggacgactg cgaacatcgc gtcataagtg ccgctcgcgc cgagaaagcc
     1081 gatcaaatag cccaggcctt cgcgcgccgc gatgagctcg gagctgacca agaggatgaa
     1141 ggaaagcgcg agcgcggtgc ggacgccgtt gagcagctcg ggcatcgcgc tcggcacaac
     1201 cacgtcccat aacatgcgca gtcgatttgc tcccatgctg cgcgccgacc agaccagcgc
     1261 ctgctcgctc gaacgcgcgc cgttgaaggc gccgatcgtg accggcagca tgcagccgag
     1321 aaagatcagc aggattttcg agccgttgcc gaatccgagc cacagcacgg tgaccgggat
     1381 cagcgccgat ttcggcatcg ggtagaacat ctccaccaaa ggactgagca gcacgttcac
     1441 cgtccgccac caggccatga agattccgag gccggccccg atcacgatcg ccagagtgag
     1501 cccggcgccg gtgcgccaca gcgacgccgc gccgttgcta ataagctcgc cgtccttgag
     1561 aagctcgacc cacgcagcca gcacactgct gagcggcggc aaggcgagcg cggagatcag
     1621 gccgctgcgc gcgccgacct cccacgccag cgcgagcaag agcagcggaa cgtaccgcag
     1681 cagcgccgcc gtcatgccac gctctcgctg tgcttgctga accttgcccg agttcgcaga
     1741 cgggccgacg tcgagtgaac tcgacttcgc ctgggaggga ggttgggata acgtgccatc
     1801 atcggctcag gcatgccgcc cgccctgcgc cttgatcgct tcgatgcgca ccaggttcca
     1861 gatctcgtca accttgtcga tgaagccctg attcttgaag atagcaggat cgctcttgtc
     1921 gaatttggta tcgacgaggg ccttgatgcg gcccggcctg gccgacatca ccgccacgcg
     1981 gtcggcaaga taaaccgcct cctgcacgtc gtgggtcacg aaaatcacgg ttttcggcgt
     2041 gcgctgccag atgctcagca attcggactg catgaggctg cgggtctggg cgtcgagcgc
     2101 gccgaacggc tcgtccatca gcaggatttt cggatcgaag gccagcgtgc gcgcaatcgc
     2161 ggtgcgttgg cgcatcccgc ccgaaagctg cgagggatag ctgtcctcga agccgttgag
     2221 gccgacgaga tcgatgaagg attgcgcccg cctctcgcgt tcctcgcgcg caagtctcat
     2281 ccgctccaag ccgtagagga cattggcgcg gaccgtcttc cacggaaata gcgcgaagtg
     2341 ctgaaagacg atgccgcgat cgggcccggg ggcgccgatc ggcttgccct cgatgaggat
     2401 cttgccggtt tccgtcgg
//
LOCUS       DATCWM010000073         3382 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_486375, whole genome shotgun sequence.
ACCESSION   DATCWM010000073 DATCWM010000000
VERSION     DATCWM010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3382)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3382)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3382
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_486375"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            286..1419
                     /gene="solA"
                     /locus_tag="VIQ50_01315"
     CDS             286..1419
                     /gene="solA"
                     /locus_tag="VIQ50_01315"
                     /EC_number="1.5.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050131 - N-methyl-L-amino-acid oxidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-methyl-L-tryptophan oxidase"
                     /protein_id="HEY9359044.1"
                     /translation="MAHFDVVVCGLGAMGTAAAQHLARRGKRVLGIERHAPGHDRGSS
                     HGRTRIIRLGYFEHPSYVPLLRHAYGLWRDLERAAGRELLHVTGIAEIGPPSGVLVKG
                     TLGSARIHDLPHEVIPAPELMRRFPAFRVPPDYVAVLQPDGGMLEAEGAVAAQLALAT
                     AAGAHIRNGERVRALEPHPNYVRIVTDRGNIDAGAAIVTVGPWLPSFLPALGAPLRVT
                     REVMTWFAPADAQPFSPGRTPVFIIESRHGMHYGIPPRADIHAGIKIAKHHHRNETVD
                     PDAYDRTVSADDEALIRAALAEHIPAANGRLLAAKTCLYTMTPDGDFLIDRLPGAANI
                     IVASPCSGHGFKFAPVIGEIVADLATTGATPHDIAGFSLRRFG"
     gene            1538..3175
                     /locus_tag="VIQ50_01320"
     CDS             1538..3175
                     /locus_tag="VIQ50_01320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty-acid--CoA ligase"
                     /protein_id="HEY9359045.1"
                     /translation="MLGLMQDWPLLCHRIIDHAGINHAERTIVTRSVEGPLHTTTYAE
                     VRARALRLAQRLDKAGIRLGDRVATLAWNTWRHIEAWYGIMGIGAIYHTINPRLFPDQ
                     ISWIVNHAEDRLMLVDLTFVPLLEQLAGKLPTLERYVLLCDRAHMPQTSLKNAVPYEE
                     WIGEVDGDFAWKTFDENTAAGMCYTSGTTGNPKGVVYSHRSNVLHGLMANSADMKGYS
                     CRDVVMPVVPMFHANCWAMMFATPMAGAALIMPGAKLDGASVFELLDRYKVTCTAGVP
                     TVWLMLLQHLEATGGKLPHLKKVVIGGSACPRAMAKIFQDIYGVEVIHAWGMTEMSPL
                     GTACTLKPEYAGLAGDARLDIQEKQGQTPFMVEMKITDDAGRRLAWDGKTSGRLKVRG
                     PSVARAYYKEGGDVLDEEGFFDTADVSTIDRYGYMHVTDRAKDVIKSGGEWISSIELE
                     NLAVGHPKVAEAAVIGVKHPKWDERPLLIVVLKKNQSASRDEILKFMQGKVAKWSLPE
                     EVVFVDEIPHTATGKIQKTVLRERFKDFVLPSAVAAQ"
BASE COUNT          625 a         1104 c         1064 g          589 t
ORIGIN      
        1 caggttccgg agttgatgtc tgcgccggcc gcgaccgcgg caacggcacg gcctgcgcgg
       61 ccgataagcc gcagcaggtc acactgcaaa aggctgcaag aaggacgagc gcggagggaa
      121 gcttcaccgt catcatatcc gcaaggattg cgaccttatg gcggccaccc gcaccggcac
      181 gaaacccggc acgcggggcc actacggggc ccgtaacccc ttcaccgtgg cgaaagcgtc
      241 atcacaatag ctgcacttgg cgcaaaggat agtgagcccg acgttatggc gcatttcgat
      301 gtcgtggtct gcggccttgg cgcgatgggg actgcagcgg cgcagcacct agcgcgcaga
      361 ggcaagcggg tgctgggaat cgagcgccat gctcccggtc atgaccgcgg ctcttcccat
      421 ggccgcacgc gcatcattcg gctcgggtac ttcgagcatc cctcgtacgt gccgctgctg
      481 cgacacgcct acggcctctg gcgtgacctc gaaagagcgg cggggcgtga gcttctgcat
      541 gtgacaggca tcgccgagat cggcccgccc agtggcgtgt tggtcaaggg aacgctgggc
      601 agcgcccgga tccacgattt gccccacgag gtgatccccg caccggaact gatgcgccgc
      661 ttcccggcgt tcagagtgcc gccggattat gtcgccgtcc tccagccgga tggcggcatg
      721 ctcgaggcag agggcgcggt tgcggcgcag cttgcgctcg cgaccgcggc cggggcacac
      781 atccgcaacg gcgagcgggt gcgagcgctc gagccgcacc ccaactacgt gcgcatcgtc
      841 acggaccgcg gcaacatcga tgccggggcg gcgatcgtta ccgtgggtcc ttggctgccg
      901 tcgttcttgc ccgcgcttgg cgctccgctg cgggtcaccc gcgaggtgat gacttggttc
      961 gccccggccg atgcgcagcc gttttcgccc ggacgcaccc cggtgttcat catcgaaagc
     1021 cggcatggca tgcactatgg cattccaccg cgcgcggaca tccacgctgg gatcaagatc
     1081 gccaagcatc accaccgcaa cgagacggtc gatcccgacg cttacgaccg aacggtgtcc
     1141 gcggacgatg aggccttgat ccgcgcggcc ctcgccgagc acatcccagc ggcgaacggc
     1201 cggctcctcg ccgccaagac atgcctctac accatgaccc ccgacggcga cttcctcatc
     1261 gatcggctgc ccggcgccgc caacatcatt gtcgcttcgc cctgctccgg tcacggcttc
     1321 aaattcgccc ccgtgatcgg ggagatcgtc gccgatctcg cgaccactgg tgcaacgccc
     1381 catgacatcg cggggttttc gcttcgccgc tttggctgag cagcggccgc gggcgccgat
     1441 tctccggttg cgcggttgcg acatgccggt aaccttgggg gcatgcgcgg cctcgggccg
     1501 gctctgagtg caaaaacgag aactgtgagg aaacgcgatg ctcggactga tgcaggattg
     1561 gccgctcctt tgccatcgca tcatcgacca tgccgggatc aatcacgcag agcggacgat
     1621 cgtcacgcgc tcggtcgaag gcccacttca caccaccacc tacgccgagg ttcgcgcgcg
     1681 ggcgctgcgc ttggcacaac gcctcgacaa ggccggcatc cgcctgggcg atcgcgtggc
     1741 gacgttggcg tggaacacgt ggcgccatat cgaggcgtgg tacggcatca tgggaatcgg
     1801 cgcgatctat cacaccatca atccgcggct gtttcccgat cagatcagct ggatcgtcaa
     1861 tcacgccgag gatcgcctga tgctggtgga cctgacgttc gttccgttgt tggaacagct
     1921 cgccggcaaa ctgccgaccc tcgagcgcta cgtgctcctg tgcgatcgtg cgcacatgcc
     1981 gcaaacgtcg ctcaagaacg ccgtgcccta cgaagagtgg atcggcgaag tcgacggcga
     2041 ttttgcctgg aaaacgttcg acgagaacac cgcggcgggc atgtgttaca cctcgggaac
     2101 gaccggcaat ccgaaaggcg tcgtgtactc gcatcgctcc aatgtcctgc acggactgat
     2161 ggccaacagc gcggacatga agggctactc gtgccgtgac gtggtgatgc cggttgtgcc
     2221 catgttccat gccaattgct gggcgatgat gttcgcaacg ccgatggcgg gcgctgcttt
     2281 gatcatgcct ggtgccaagc tcgacggagc ctcggtcttc gaattgctcg accgctacaa
     2341 agtcacctgc accgccgggg tgccgacggt atggctcatg ctgctgcagc atctggaagc
     2401 cacgggcggc aagctgcctc acctgaaaaa agtcgtgatc ggcggctccg cctgcccgcg
     2461 cgccatggcc aagatcttcc aagacatcta tggggtggag gtgatccatg cctggggcat
     2521 gaccgaaatg agcccgctcg gcacggcctg cacgctcaaa cccgaatacg ctggtctcgc
     2581 cggggacgcg cggctcgata ttcaagagaa acaggggcag acgccgttca tggtggagat
     2641 gaaaatcacc gatgatgccg gcaggcgcct tgcttgggac ggcaagacct cgggccggct
     2701 caaggtgcgt ggaccgagcg tggcgcgcgc ctattacaag gaagggggcg acgtcctcga
     2761 cgaggaaggt ttcttcgaca ccgccgatgt ttcaaccatc gaccgctacg gctatatgca
     2821 cgtgaccgac cgtgccaagg acgtgatcaa atcggggggc gagtggattt cctcgatcga
     2881 gctcgagaac ctcgccgtcg gccaccccaa agtggcggag gcggcggtca tcggcgtcaa
     2941 gcatcccaag tgggacgagc ggccgctgct catcgtggtt ctcaagaaga accagtcggc
     3001 cagccgggac gaaatcttga aattcatgca gggcaaggtt gccaagtggt cgctgcccga
     3061 ggaggtcgtt ttcgtcgacg agatcccgca caccgcgacg ggcaagatcc agaaaaccgt
     3121 actgcgcgag cggttcaagg atttcgtgct accgagcgcc gtcgccgccc agtgaaccga
     3181 tctctcgcct gccgacatcc tcgcgcgcca aacgctcgca ttgtctctac cccatgcgct
     3241 aaaattggct cccatcaccg cggtctcctc caggaagcca acgcatgacc actttcgatg
     3301 cgaccgtctg cgcgtcgcca tcgggcactg tctgctcgtt ttgctgaggt agaacgatgg
     3361 ctcgccgcta catcccatcg ga
//
LOCUS       DATCWM010000074         3659 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_378459, whole genome shotgun sequence.
ACCESSION   DATCWM010000074 DATCWM010000000
VERSION     DATCWM010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3659)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3659)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3659
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_378459"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..193)
                     /locus_tag="VIQ50_01325"
     CDS             complement(<1..193)
                     /locus_tag="VIQ50_01325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016841108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9359046.1"
                     /translation="MTAALTPRNAVIVVLMLLLAAVPVYAAVTANTFLVTLFTRVIIL
                     GTAATTLNLILGYGGMVSFG"
     gene            complement(190..1107)
                     /locus_tag="VIQ50_01330"
     CDS             complement(190..1107)
                     /locus_tag="VIQ50_01330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9359047.1"
                     /translation="MLLFIEQCLNGLQFGLLLFLLAAGLTLVFGIMDLVNLAHGSLYM
                     LGAYFAATFAAWTDSFVLGALLALGATLLVGMVLEVVALRRLYGRDHLDHVLGTFGLI
                     LFFNELVRLIWGPAGMSLSLPMWLISPVEILPGLFYPTYRIAIILTALLVALFLYILV
                     MRTRLGMLVRAGASNREMTGALGVNINLLYTLVFGLGAALAGLAGLMQAPILTVQIGM
                     GENILILAFVVIIIGGIGSIRGAFIAAVLVGLIDTIGRAFLPDLLRLVLSSRGASTVA
                     PALSSMLIYLLMAIVLVLRPEGLFPVSSK"
     gene            complement(1190..2347)
                     /locus_tag="VIQ50_01335"
     CDS             complement(1190..2347)
                     /locus_tag="VIQ50_01335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018316864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359048.1"
                     /translation="MGTVALVALGAAPAWPQQSVKIGFVSTFSGPTAVIGNDMRNSFE
                     LALDHLGRKMAGKPVEVIYEDDQQKPEVGVQKSQKLVESDKVDFVIGYIWSNVLLASL
                     KPVVDSQTFLISANAGPSQVAGEQCSPFFFSTSWQNDQTPQAMGTYMTQKGVKTAFLI
                     GPNYAAGKDMLTGVRTTFKGQVIAEELTKWPDQLDFSTELSKVRAARPEAVFVFYPGA
                     AGVQFLTQYAQSGLKGQIPLYTAFTIDAITLPLQKDLALGVPGAQEWVNDLPNDANKK
                     FVADFRAKHKNYPSFYGAQSYDAANFANSAVVAVNGDLSKKDAMRAEMRKANYASVRG
                     PYKYGNNQFPIQNFYLQDVVKDAEGNFTLKTVTTIVKDSQDQFHDKCPMKW"
     gene            2598..>3659
                     /locus_tag="VIQ50_01340"
     CDS             2598..>3659
                     /locus_tag="VIQ50_01340"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY9359049.1"
                     /translation="MHELTGRTHWHEPSGNERAGFGEFGRPKTPYDLFMESEGIPIYR
                     DIGVSKVQNLPLAPWKRLGGKGTYIQLHGTEGKWGCYVVEVPGAGALHAERHLYEEIY
                     LVVEGRGTTEVWLDGDSKRHVFEWQKGSLFSIPVNAWHRIVNASSAPALLLGGTTAPN
                     LVNLINNVELIFNCPYEFRDRFSGADDFYRYKDDIEPDPVRGLAMRRTNFIPDVVNCD
                     LPLDNRRSPGWRRVEPFMTGNTFYLWIGQHENGRYSKAHAHTSAAVLICLKGKGYTYT
                     WPERYGVTPWKDGHGEKVKRVDYEPVGMVSAAPGGARWYHQHFGASKDPLRLTAWFGP
                     HNPGREPGPPGEKHVDYTGM"
BASE COUNT          737 a         1142 c         1151 g          629 t
ORIGIN      
        1 gtccgaagct caccatgccg ccatagccca ggatcaggtt gagcgtggtt gcggccgtgc
       61 cgagaatgat gacgcgcgtg aacaaggtga cgaggaacgt gtttgccgtc accgccgcat
      121 agaccggcac ggcggcgaga aggagcatca ggaccacgat cactgcattg cggggcgtga
      181 gcgcggcggt catttgctcg ataccggaaa gagaccctcc ggccgcaaca ccagcacgat
      241 cgccatcagc aggtagatca gcatcgacga cagcgccggc gcgaccgtgg acgccccgcg
      301 cgagctcaag accagccgaa gcagatccgg caggaacgcc cgtccgatcg tgtcgatgag
      361 tccgaccaga acggcagcga tgaaggcgcc gcgaatcgaa ccgatgccgc cgatgatgat
      421 aaccacgaag gcgaggatca aaatgttctc gcccatgccg atctgcacgg tgaggatcgg
      481 cgcctgcatc agtccggcaa gcccggcgag cgccgcgccg agaccgaaga ccaacgtgta
      541 gagcaggttg atgttaacgc cgagcgcgcc ggtcatctcc cggttggaag cgccggcgcg
      601 aacgagcatg ccgagccggg tgcgcatcac caggatgtag aggaacagcg cgaccaatag
      661 cgccgtcagg atgatcgcga tgcggtaggt cgggtagaaa agtcccggca gaatctcgac
      721 tggcgagatg agccacatcg gcagcgacag gctcattccc gccggccccc aaatgagccg
      781 caccagctcg ttgaagaaca aaattaagcc gaacgtgccg agcacgtggt cgagatgatc
      841 gcggccgtag agccggcgca gcgccaccac ttcgagcacc atcccgacca gaagcgtggc
      901 gccgagcgcc agcagcgctc ccaggacaaa actgtcggtc cacgccgcga aggtcgccgc
      961 gaaatacgcc cccagcatgt agagcgagcc gtgggcgaga ttgaccagat ccatgatgcc
     1021 gaagacgagc gtgaggccgg cggcgagcaa aaacagcagc agcccgaact gcagaccgtt
     1081 caggcactgt tcgataaaca acagcatcag attgtgacgg acgatggatg gacctttcgg
     1141 cccgtcgctc ttgtcgccgc ctgtcccccg tcccgcctcg ctcgcccagt caccacttca
     1201 ttggacactt gtcgtgaaac tgatcctgac tgtccttgac gatcgtggtg acggtcttga
     1261 gggtgaagtt gccttccgcg tccttcacta catcctgcag gtagaaattc tgaatcggaa
     1321 actggttgtt gccgtacttg tagggaccgc gcaccgatgc gtagttggcc ttgcgcatct
     1381 cggcgcgcat ggcgtccttc ttgctgagat cgccgttgac cgcgacgacc gcgctgttgg
     1441 cgaagttcgc cgcgtcatag gactgcgcgc cgtagaacga gggatagttc ttatgcttgg
     1501 cgcggaagtc cgccacgaac ttcttgttgg cgtcattcgg cagatcattc acccactcct
     1561 gggcacccgg cacgccgagc gcgagatcct tctgcagcgg aagcgtgatc gcgtcgatcg
     1621 tgaacgccgt atagagcggg atctgaccct tgagcccgga ctgggcatac tgcgtgagga
     1681 actgcacgcc ggcggctccg ggatagaaca cgaacacggc ctcgggtctg gccgcgcgca
     1741 ctttcgacag ctcggtggag aaatcgagct ggtccggcca cttggtcaat tcctcggcga
     1801 tgacctggcc cttgaaggtc gtgcgcacgc cggtgagcat gtctttgccg gcggcgtaat
     1861 tcggcccgat caggaaggcg gtcttcaccc ctttctgcgt catgtaggtg cccatcgcct
     1921 gcggggtctg atcgttctgc caggaggtcg agaagaagaa gggtgagcac tgctcgccgg
     1981 cgacctgcga ggggccggcg ttggcgctga tcaggaaggt ctgcgaatcc accaccggct
     2041 tgagcgaagc gagcagcacg ttcgaccaga tgtagccgat cacgaaatcg accttgtcgg
     2101 actcgaccag cttctgcgac ttctgcacgc cgacttcggg cttctgctga tcgtcctcat
     2161 aaatcacctc gaccggcttg ccggccatct tgcggccgag atggtcgagc gcgagttcga
     2221 aggagttgcg catgtcgttg ccgatcaccg cggtcgggcc gctgaacgtg ctgacgaacc
     2281 cgatcttcac ggattgctgg ggccaggctg gcgccgcgcc gagtgcgacg agagcaaccg
     2341 ttcccatcag aagccttttc atgtgcgcta tcctccaaga cgccgagcga actccaaagc
     2401 cgatcttagt ggatcggttc aggggtcaaa agccctcctg tccgtggcct ttcgtcccgc
     2461 atcgagcgtc gcttagctaa gcttttgcgt caacgaacgc gcgtccgtcc gcacgcctga
     2521 gcgggggcgc gccttgcctt gcccgggggc cggcagtaaa gcattcatcc ggctgcgctt
     2581 ctacgatagg cgtcgcgatg cacgaactga ccggcaggac gcattggcat gagccgagcg
     2641 gcaacgagcg agccggcttc ggcgagttcg gccggcccaa gacgccctac gacctgttca
     2701 tggaatcgga aggcattccg atctaccgcg acatcggcgt gagcaaggtg caaaatttgc
     2761 cgcttgcgcc atggaagcgg ctgggcggca aaggcaccta tatccagctg cacggcaccg
     2821 aaggcaaatg gggctgctac gttgtcgagg tgccaggggc cggcgcactt cacgcggaaa
     2881 gacacctgta cgaggaaatc tacctcgtgg tcgaggggcg cggcaccacc gaagtctggc
     2941 tcgatggcga cagcaagcga catgtcttcg aatggcagaa gggctcgttg ttctcgattc
     3001 cggtgaacgc ctggcatcgc atcgtcaacg cgagctcggc gccggcgcta ctcctcggcg
     3061 gcaccacggc acccaacctc gtgaacctga tcaacaacgt ggagctcata ttcaactgtc
     3121 cttatgagtt ccgcgaccgc ttcagcggcg ccgacgactt ctacagatac aaggacgaca
     3181 tcgagccgga tccggtgcgc gggctcgcta tgcggcgcac gaatttcatt cccgacgtcg
     3241 tcaattgcga cttgccgctc gacaaccgcc gctcacccgg gtggcgtcgc gtcgagccgt
     3301 tcatgaccgg caacacgttt tatctctgga tcgggcagca cgagaacggc cgttattcca
     3361 aggcgcacgc gcacacatcg gccgccgtgc tgatctgcct caaaggcaag ggctacacct
     3421 atacctggcc ggagcggtac ggcgtcactc cctggaaaga cgggcatggc gagaaggtca
     3481 aacgcgtcga ctacgaaccg gtggggatgg tgtcggcggc ccccggcggg gcgcgctggt
     3541 atcaccagca cttcggcgcg tcgaaagacc cgctgcgtct gaccgcgtgg ttcggaccgc
     3601 acaatccggg ccgcgagcca ggccctcccg gcgagaagca cgtcgattac accgggatg
//
LOCUS       DATCWM010000075         3364 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_265163, whole genome shotgun sequence.
ACCESSION   DATCWM010000075 DATCWM010000000
VERSION     DATCWM010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3364)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3364)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3364
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_265163"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            144..1031
                     /locus_tag="VIQ50_01345"
     CDS             144..1031
                     /locus_tag="VIQ50_01345"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016848344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEY9359050.1"
                     /translation="MEIVPLGPGFAAELRGVTLTDIAADEAAYNATRAAFEEHSVIVF
                     RGQEVTDETQLAFSRRFGPLEVTKVGSLGTGTNLVILSTIDEHGKVVPADHRLALRNK
                     ANQLWHTDSTFKRVPALASVLSARIIPARGGETEYVSTRLAWERLEDASRKRLGNSFA
                     WHDYAHSRGKIASDLASAEERAALPPQCWRMVWTNPVNGRSALYLASHAYAIEGMEQA
                     AAQKLLAELMDAATAPGLSYVHRWCKGDVVMWDNRATMHRGRPWPAHEARLMVRTTIS
                     ATEVDGLESVRPPARQAAE"
     gene            1097..1585
                     /locus_tag="VIQ50_01350"
     CDS             1097..1585
                     /locus_tag="VIQ50_01350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018326514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HEY9359051.1"
                     /translation="MSWSGRLLHIHIAKRASLAMEELDEVKLVAGRGIEGDRYFYGTG
                     TYSPKPDAREVTLIEVEVLEAIARGDPPAPGKAVELAPADHRRNLTTIGVPLGHLVGR
                     RFKVGEVVLTGGRLNFPCKYLEKLLGRPVYAPLVNRSGLNCRIEVGGLIRKGDLITPL
                     ED"
     gene            complement(1874..3100)
                     /locus_tag="VIQ50_01355"
     CDS             complement(1874..3100)
                     /locus_tag="VIQ50_01355"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ceramide glucosyltransferase"
                     /protein_id="HEY9359052.1"
                     /translation="MLALSACAFCAIAAVLHLASIAAVVRRMRRSEADKPREETLEGV
                     SIVRPICGLENFTEETLLSGFLLEYPDYEILFCVAQPSDPVIPLVRRLIDLHPHARAR
                     LLIGNECISANPKLNNVVKGWTAASHPWIVMADSNVLMPPDYLHRLLESWRPDTGLIS
                     SPAIGCAPGNVWAELECAFLNTYQARWQGFADSVGLGFAQGKTMLFRRAVLESAGGIR
                     ALGLESAEDAAFTKLVRKSGLRVRVVNRPFPQSLGHRTAAEVWRRQLRWARLRRDTFR
                     AYFVPEVAAGGLPPLTGIAGLAGGGRTHRLRRHLVWRRGGSGLHRRLAPVVAIPARVV
                     GARCTPADSVVGELAGQWVRLARHADARPQPRLSRVRERGQRRRDAGSGQNARWPCHR
                     RNPSRLNPRVPCPTPA"
     gene            complement(3113..>3364)
                     /locus_tag="VIQ50_01360"
     CDS             complement(3113..>3364)
                     /locus_tag="VIQ50_01360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359053.1"
                     /translation="SPADEAAVVKNLRRVSDAAPRAMTAIGPPPSNHRGGSCSRRLTG
                     DLHFNDGCVTPHYSAIAPRKAQMRDRYRPVIGESSIRHI"
BASE COUNT          634 a         1076 c         1081 g          573 t
ORIGIN      
        1 tcccggaagg gccgggagcg cttcctagcc gagcgcgagc gccgccgcgg tcggagcgtt
       61 tccggcgaat gaggcgctca cgtcttgcga gccggggtga tctcgtggaa gcttgagcaa
      121 taaagccaac ggagggctcg ccgatggaaa tcgttccgct gggtccgggc tttgccgccg
      181 agctgcgcgg cgtgacgctc accgacatcg ccgccgatga ggccgcctac aacgcgacgc
      241 gggcggcgtt cgaggagcat tcggtcatcg tctttcgcgg ccaggaggtg accgacgaga
      301 cgcagctcgc gttctcgcgt cggttcgggc cactcgaggt gaccaaggtc ggttcgctcg
      361 gcaccggcac caatctcgtg atcctcagca cgatcgacga gcacggcaag gtcgtgccgg
      421 cggatcaccg gctggcgctg cgcaacaagg caaaccagct ctggcatacc gacagcacct
      481 tcaagcgcgt gccggcgctc gcctcggtac tctcggcgcg gatcatcccc gcgcgcggcg
      541 gcgagaccga atatgtctcc acccgcctcg catgggagcg gctcgaagac gcgtcgcgca
      601 agcgactcgg gaattccttc gcctggcacg actatgccca ttcgcgcggc aagatcgcgt
      661 cggacctggc gagcgcggag gagcgcgcgg cactgccgcc gcaatgctgg cgcatggtgt
      721 ggacgaatcc ggtgaacggc cgtagcgcgc tctatctcgc ctcgcatgcc tacgcgatcg
      781 agggcatgga gcaggcggca gcgcaaaagc tcctcgccga actgatggat gccgcgaccg
      841 cgcctgggct cagctatgtg catcgctggt gcaaaggtga cgtcgtcatg tgggacaacc
      901 gcgcaaccat gcatcgcggt cgcccttggc ccgcgcatga ggcaaggctc atggtgcgca
      961 cgacgatctc cgccactgaa gtggacggac tcgagagcgt gcgtccgccc gcacggcagg
     1021 cggcggaata aacatgcttg ggcgcgaacc gggtggacta tcggccgctg cctacgacgt
     1081 ggccggacga caggcaataa gttggtccgg ccgtctgctc catattcata tcgcgaaacg
     1141 agcatcgctc gcgatggaag agctcgatga ggttaagctc gtcgccggcc gcggcatcga
     1201 aggcgatcgc tatttctatg gaaccggtac ctactcgcca aaacccgacg cgcgcgaggt
     1261 gacgctcatc gaagtggaag tactcgaggc gatcgcgcgg ggcgatcctc cggctccggg
     1321 caaggcggtc gagcttgcgc ccgcagatca tcgccgcaat ctcacgacga ttggcgtgcc
     1381 gctcggccac ctcgtcggca ggcgcttcaa ggtcggcgaa gtggtgctca ccggcgggcg
     1441 gctgaacttt ccctgcaagt atctggagaa gttgctgggg cggccggttt acgcgcccct
     1501 cgtcaatcgc tctgggctca attgccgaat cgaagtcggc ggccttatcc gcaagggtga
     1561 tctgatcacg ccgcttgagg actagaagcg atctacctcc ggtaagagat caatccgggc
     1621 ctacttaagc tgcgtcggcc tgcctcacgc cgggatatac atccatgaca gcacgagaac
     1681 cgttcccagg atcgagtaga gcaaaactcc cgcgcgatcc gacgtccagg tcatgacaca
     1741 tctccttctt ccaaagcacc ctctgttgtt gaagagatat atccaacagg gtggcgggtc
     1801 tgtgacctag gtcacacttt tgcgctttcc tatccgctct tgttaacctg cagttaccaa
     1861 aggggaatcc ggcctatgcc ggggtcggac agggcacgcg cgggttcagc cgcgagggat
     1921 tgcgccgatg acagggccac cgcgcgtttt gcccgcttcc tgcgtcgcga cgccgctggc
     1981 cccgttccct tacgcggctg agccgcggtt gaggacgcgc atcggcgtgc cgcgccagac
     2041 gaacccattg cccagccagc tcgccaacca cagaatcggc aggagtgcat cgcgcgccaa
     2101 ccacacgagc ggggatcgcc acgacaggtg ccaggcggcg atgtaagcca gaaccgcctc
     2161 ggcgccatac cagatggcgg cgaaggcgat gagtgcgccc gccaccggcc agtcctgcga
     2221 tccccgtgag cggagggagg ccgcccgccg cgacttccgg cacgaagtaa gctcgaaacg
     2281 tatcgcggcg cagccgcgcc cagcgcaact gccgcctcca tacctccgcg gcggtgcggt
     2341 gcccgagcga ctgcgggaag ggccggttca ccacgcgcac gcgcaaacca ctctttcgca
     2401 cgagcttggt gaatgcggca tcctctgcgc tttcgaggcc gagggcgcga ataccgcctg
     2461 ccgactcgag gaccgcgcga cgaaacagca tcgtcttgcc ttgcgcaaag cccaatccga
     2521 cgctgtcggc aaaaccttgc cagcgcgctt gataggtatt gaggaacgcg cattccagct
     2581 cggcccagac gttgccgggt gcgcatccga ttgctggcga tgaaatgaga cccgtatccg
     2641 gtcgccagct ttccagcaga cgatgaagat agtcgggggg catcagcacg ttgctgtcgg
     2701 ccatcacgat ccagggatgg gaggctgcag tccatccttt gacgacgttg ttgagcttgg
     2761 gatttgcgct gatgcattca ttgccgatca gcagtcgcgc ccgagcatgc ggatgcaagt
     2821 cgatcaagcg ccgcaccagg ggtatgactg gatcgctcgg ctgcgcgacg caaaacaaga
     2881 tctcataatc gggatattcc aggaggaagc ccgacagcaa tgtttcttcg gtgaaattct
     2941 ccagtccgca gatcggtcga acgatcgaaa cgccctcgag cgtttcctct cggggcttgt
     3001 ccgcctcgga gcggcgcatg cgcctcacga cggcggcgat gctcgccaag tgtagaacag
     3061 cggcaatggc gcaaaacgcg caggcggaga gcgccagcat cctcatccgc gctcagatat
     3121 gccgaatcga tgactctccg atgacaggcc gatatcgatc gcgcatttgc gctttgcgcg
     3181 gcgcgatcgc cgaatagtga ggagtcacac agccgtcgtt aaaatgtaga tcgcctgtca
     3241 gacgacgcga gcagcttccg ccgcggtgat tcgacggcgg aggcccgatg gccgtcattg
     3301 cgcgcggcgc ggcgtcgcta acgcgacgca ggttcttgac gactgcggct tcatcggcgg
     3361 ggct
//
LOCUS       DATCWM010000076         4048 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_16814, whole genome shotgun sequence.
ACCESSION   DATCWM010000076 DATCWM010000000
VERSION     DATCWM010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4048
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16814"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..233)
                     /locus_tag="VIQ50_01365"
     CDS             complement(<1..233)
                     /locus_tag="VIQ50_01365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006610128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HEY9359054.1"
                     /translation="MARAEVASASVSSDSIKGLAQSIAKPAYRRLLTAEPALRRAVPA
                     LIIAFLVTICVGAIVQVLDHRRQAAGEVIKQIEA"
     gene            complement(481..3132)
                     /gene="pepN"
                     /locus_tag="VIQ50_01370"
     CDS             complement(481..3132)
                     /gene="pepN"
                     /locus_tag="VIQ50_01370"
                     /EC_number="3.4.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HEY9359055.1"
                     /translation="MRTEEARPIRLEDYRPPDWLVETVELDVLLDPTASRIRAALTLR
                     PNNNGSAPAPLVLDGDALNLRGLKLDGAVLPPEQFVATPDRLTIAQPPQRPFRLEIET
                     VVDPSANTQLSGLYRSGAIYCTQCEAEGFRRITYFPDRPDVMAVYTTRVEADKAEAPV
                     LLANGNPVAAGDVPGTTRHFAVWHDPFPKPSYLFALVGGKLACVEDRFRTMSGREVTL
                     RVYVEPGKERRCLYAMDSLKRAMRWDETAFGREYDLDIFMIVAVSDFNMGAMENKGLN
                     IFNDKYILASPETATDNDFERIEAIVAHEYFHNWTGNRITCRDWFQLCLKEGLTVFRD
                     QEFSADQRSRAVERISDVRSLRAHQFVEDAGPLAHPVRPAVYREINNFYTATVYEKGA
                     EVVRMLKVLLGPENFRKGMDLYFSRHDGEAATVEQFVQCFADASRTDLGQFMLWYSQA
                     GTPEVVATGSYDGGGKTYRLEVAQRIPATPGQSDKQPMVIPLGVGLVGRDGRDLPLKL
                     SDGRVIERGVLTLTKPAETFVFADIGEPPVPSLNRGFSAPIKLSTNLSGGDLRFLAAH
                     DADPFNRWQALQTLATRLLVDNTAALRTNRAPRQDPGLLDGLGATLADGALEPAFVAL
                     ALTLPGEADIAREIGHEVDPDAVFAARTELRARIGEHLAGSLFDHYRRLSESRPYRPD
                     AADAGRRALRNTCLDLLVATRRADTISLAARQYQAADNMTDRMAALATLSLCDVPERT
                     AALEDFYNRYADDPLIVDKWLTLQATIPEPATLERVKALTQHRAFSFANPNRVRALIH
                     AFALANQKEFNRADGAGYDFIVDIVLALDRKNPQLAARLVSALKTWRMLEPMRRARAQ
                     AALRRVAAASSRSVDVDDIVHRALAEG"
     gene            3307..>4048
                     /locus_tag="VIQ50_01375"
     CDS             3307..>4048
                     /locus_tag="VIQ50_01375"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9359056.1"
                     /translation="MTLRASSLVLAGIVASLVGASPAASEQAYPNQVVRIVVPFSAGS
                     ITDGLARILADKLAEVWKQQVIVENRPGLPGTTGVAKSPPDGYTLMLTSNGHTIAGAI
                     NKNIQFDPVKDFAGVARVASVPLVAIVPPEFAAKTLKDFITLAKEKPGQLNFSSAGVA
                     STSYLSAEIFKQDAKINIVHIPYKGAPEATTAVIRNDAQMYFAPIPATQELSSTGKVR
                     AIAINSAKRVPQLPDVPTIAETLPNYKYE"
BASE COUNT          725 a         1254 c         1339 g          730 t
ORIGIN      
        1 gcttcgatct gtttgatgac ctcgccggcc gcttggcgac gatgatccag cacttgcacg
       61 atggcgccga cgcagatcgt caccagaaag gcgatgatca gcgccggcac ggcgcgccgc
      121 agcgccggct cggcggtgag cagccgccga taagccggtt tggcgatcga ctgagctagt
      181 cctttgattg aatcagaact tacggacgcg ctcgcgactt cggcgcgcgc catgcctcgc
      241 ctccgttcgg gtcctcatca ccttcatcgg aaggatgtgc cgcatctctc cgaatcaatt
      301 gtgattggaa tcgaaagatg gcgatttgtc gagaggcaaa ttaacgaatt tgcaatattg
      361 atgaatccgg gcttgctcct tgatcggtaa ggagtttcgg ggaggaagcg caaaaatttg
      421 cgttcacggt tcgtgcccga acgaggcact cgccaagcga accgggtggt ggcggcgacg
      481 tcagccctcg gccagcgcgc ggtgcacgat atcatccacg tcgaccgagc gcgaagatgc
      541 cgccgcgact cgccgtagcg cggcttgcgc gcgagcgcgc cgcatcggct cgagcatgcg
      601 ccaggtcttc agcgccgata ccagcctcgc ggcaagctgg gggttcttgc gatcgagcgc
      661 cagcacgatg tccacgatga agtcgtaacc ggcgccgtcg gcgcggttga actccttttg
      721 gttcgccagc gcgaaggcat ggatcaacgc gcgcacgcga ttgggattgg caaacgaaaa
      781 ggcgcgatgc tgggtcagcg ccttgacgcg ctcgagcgta gccggttccg ggatagtcgc
      841 ctgcagcgtg agccatttgt cgacgatcag cggatcgtcg gcgtaacggt tataaaaatc
      901 ctcgagcgcg gccgtccgct cgggcacgtc gcagagcgac agcgtcgcga gggccgccat
      961 gcgatccgtc atgttgtcgg cggcttgata ctgccgggcg gcaagcgaaa tggtgtccgc
     1021 tcgccgcgtc gccacgagaa ggtcaaggca ggtgttgcgc agcgcgcgcc ggccggcgtc
     1081 ggcggcatcg ggccggtagg gccgactttc ggagagccgg cgatagtggt cgaagaggga
     1141 tccggcgaga tgctcaccga tcctcgcgcg caactcggtg cgggcggcga acacggcgtc
     1201 cgggtcgacc tcgtggccga tctcacgtgc gatgtccgcc tcgcccggaa gcgtcaacgc
     1261 aagagcgaca aaggcgggtt cgagcgcgcc gtcggctagc gtcgcgccga gtccgtccaa
     1321 gagccccgga tcttggcgcg gcgcacgatt cgtgcgcaac gcggccgtat tgtcgacgag
     1381 caagcgagtg gccagcgtct gcagtgcctg ccagcggttg aacggatcgg catcgtgcgc
     1441 ggcgaggaag cgcagatcgc cgccggacag gttagtggag agcttgatcg gcgcggaaaa
     1501 tccgcggttg agcgaaggca ccggcggctc gccgatgtcc gcgaacacga aggtttcggc
     1561 gggcttggtc aacgtcagca cgccacgctc gatcacacgg ccatcgctga gcttgagcgg
     1621 caggtcgcgc ccgtcgcgcc cgaccaggcc cacgccgagc gggatgacca tcggctgctt
     1681 atcggactga ccgggggttg cgggaatgcg ctgggcgacc tccagccgat aggttttgcc
     1741 gccgccatcg tagctgccgg tggcgacgac ttcgggcgtg cccgcctgcg agtaccagag
     1801 catgaattgc ccaaggtcag ttctcgacgc gtcggcgaag cactgcacga attgctcgac
     1861 ggtcgccgcc tcgccgtcgt ggcggctgaa atagaggtcc atgcccttgc ggaaattctc
     1921 cgggccgagc agcactttga gcatgcgcac gacctcggcg cccttctcgt agacggtcgc
     1981 cgtataaaag ttgttgatct cgcggtagac cgcggggcgc accggatgtg cgagcgggcc
     2041 ggcatcctcg acgaattgat gtgcgcgcag gctgcgcaca tcgctgatgc gctcgacggc
     2101 gcgcgagcgt tgatcggcgg aaaactcctg atcgcgaaaa accgtaagcc cctctttgag
     2161 gcagagctgg aaccagtcgc ggcaggtgat gcggttgccg gtccagttgt ggaagtattc
     2221 gtgcgcgacg atcgcctcga tccgctcgaa atcgttgtcg gttgcggtct cgggtgatgc
     2281 caggatgtac ttgtcgttga agatgttgag gcccttgttc tccatcgccc ccatgttgaa
     2341 atcggagacc gcgacgatca tgaaaatatc gaggtcgtat tcccggccga aggcggtctc
     2401 gtcccagcgc atggcgcgct tgagcgaatc catcgcatag aggcagcgcc gctccttgcc
     2461 cggctccaca tagacgcgca gcgtcacctc gcgccccgac atggtgcgga agcgatcctc
     2521 cacgcaggcg agcttgccgc cgacgagcgc gaagaggtag gacggctttg gaaatggatc
     2581 gtgccacacc gcgaaatgcc gcgtcgtgcc cggtacgtca cccgctgcga cgggattgcc
     2641 gttggcgagc agcaccggtg cctccgcttt gtcggcctcg acgcgcgtgg tgtagaccgc
     2701 catgacatcg gggcgatccg ggaaataggt gatgcggcgg aagccctcgg cctcgcactg
     2761 cgtgcaataa atcgcgcccg agcggtacag gccggagagc tgcgtgttgg ccgaggggtc
     2821 gacgacggtc tcgatctcga gtcggaacgg gcgctgcggc ggctgcgcga tggtcagccg
     2881 gtccggcgtt gcgacgaact gttccggcgg cagcacggcg ccgtcgagct tcagcccgcg
     2941 caggttgagt gcgtcgccgt cgagcacgag cggtgccggc gccgacccat tgttattggg
     3001 ccgcagcgtg agcgccgccc gtatccggct cgccgtcggg tcgagcagca cgtcgagttc
     3061 caccgtctcg accagccaat cgggcgggcg gtaatcctca agacggatgg ggcgggcctc
     3121 ttctgtgcgc atctcggttc caatctctcg agcattctac tcgcccgcga ccgcaagaca
     3181 ccttgcggga agtgctgggt cgtgactttt ttacccatat atcggcaagc ggcttcctgc
     3241 tttaatcgct ttctcaaaag ctgcaaggcg ctgtatgggt gtgccgacaa ttgtgggagg
     3301 aatgtgatga cgttgcgtgc aagttcgttg gtgttggcgg gaatcgtggc ctcgctggtc
     3361 ggcgcgtctc ctgccgcctc ggagcaagcg tatcccaatc aggtggtgcg gatcgtggtt
     3421 ccgttctccg ccggcagcat caccgatggg ctcgcccgta ttcttgccga caagctcgcc
     3481 gaagtgtgga agcagcaggt gatcgtcgag aaccggcccg gtctgccggg cacaacgggc
     3541 gtcgccaaga gcccgcccga cggctacacg ctgatgctga cctcgaacgg tcacaccatt
     3601 gccggcgcca tcaacaagaa cattcaattc gatccggtga aggatttcgc cggcgtcgcc
     3661 cgcgtcgcgt cggtgccgct ggtggcgatc gtcccgcccg agtttgcggc caaaacgctc
     3721 aaggatttca tcacgctcgc gaaggagaaa ccgggccaac tcaacttctc ctcggccggc
     3781 gttgccagca cctcatatct gtccgccgag attttcaagc aagacgccaa aatcaacatc
     3841 gtgcacatcc cgtacaaggg cgcgcccgag gccaccaccg ccgtgatccg taacgacgcg
     3901 cagatgtatt ttgcgccgat tcccgcgacc caggagctga gctcgaccgg caaggtgcgg
     3961 gcgatcgcca tcaattccgc caagcgcgtt ccgcagctgc cggatgtgcc gaccatcgcc
     4021 gagactttgc cgaactacaa atacgagt
//
LOCUS       DATCWM010000077         3744 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_389225, whole genome shotgun sequence.
ACCESSION   DATCWM010000077 DATCWM010000000
VERSION     DATCWM010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3744
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_389225"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..435
                     /locus_tag="VIQ50_01380"
     CDS             <1..435
                     /locus_tag="VIQ50_01380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007609519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HEY9359057.1"
                     /translation="ETIRDSEITGRRTLVFGATEPQNNIAGHWQEYAFTVDGKTFDPA
                     RIDQRVRLGAVEEWTIRNTHQHDDHSFHIHTNPFQVVEIGGQPQADRTWRDTVIVPRP
                     AKGGSTVIRSRFLDYTGVFMMHCHMMNHEDLGMMQAVEVYKD"
     gene            complement(478..675)
                     /locus_tag="VIQ50_01385"
     CDS             complement(478..675)
                     /locus_tag="VIQ50_01385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HEY9359058.1"
                     /translation="MTTPPERPAGTVDPKLLEILVCPLTKGPLEYDAEKQELISRSAK
                     LAYPIRAGIPIMLPEEARRLD"
     gene            complement(765..1439)
                     /locus_tag="VIQ50_01390"
     CDS             complement(765..1439)
                     /locus_tag="VIQ50_01390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007604110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HEY9359059.1"
                     /translation="MPMNAVYQKPDDLADVIPIFPLPGALLLPRGQMPLNIFEPRYLA
                     MIDDALRTGHRLIGMIQPDPAHPGPESKPNLYKVGCVGRITQIAETGDRRYLLQLTGI
                     ARFRIDEELTVATPYRQCRVSYVPFINDFTARKGEEEVDRDSVLRALSDFLKANDLKA
                     DWEGIENAPNEALVNALAMMSPYGVAEKQALLEAPDLKTRAEILVAATEIELAKKTSG
                     GETPLQ"
     gene            complement(1528..2433)
                     /gene="trxA"
                     /locus_tag="VIQ50_01395"
     CDS             complement(1528..2433)
                     /gene="trxA"
                     /locus_tag="VIQ50_01395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011470747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEY9359060.1"
                     /translation="MTMLQGGEATAAGTVVKDTTTQTFVKDVIEESKRQPVLVDFWAE
                     WCGPCKQLGPVLEKAVRAAKGKVKLVKMDIDKHPSIPGQLGIQSIPAVFAFVNGQPVD
                     GFLGALPESQVTAFIERLTKDRLGGEEQDLLKSADDLLAKGDAAGAADLYAQVLAQDS
                     GNLAALGGLTRSYVRTGALEQAKQTLALVPEAKRNDPAVAAARAALEVSEQAKAVGPI
                     ADLEAKVAGNPLDHQARFDLALALNGKGQRQDAVDNLLEIVKRDRKWNDDGARKQLVQ
                     FFEAWGPTDEATVNGRKRLSSILFS"
     gene            complement(2619..3137)
                     /locus_tag="VIQ50_01400"
     CDS             complement(2619..3137)
                     /locus_tag="VIQ50_01400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006472222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl-tRNA synthetase associated
                     domain-containing protein"
                     /protein_id="HEY9359061.1"
                     /translation="MPATPSDLFAFLDKLGIAHATVTHPALFTVEQSRELRGTIPGAH
                     TKNLFLKDKKDALFLATALEDAVIELKSLHRRLGASGRFSFGSADLMRATLGIEPGAV
                     TPFAVMNDNDRRVGVVLDAALMRHATVNCHPLVNTMTTSIAGADLQRFLEATGHPPRI
                     VPVAEQEATPRD"
     gene            3317..3391
                     /locus_tag="VIQ50_01405"
     tRNA            3317..3391
                     /locus_tag="VIQ50_01405"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3349..3351,aa:Gly,seq:gcc)
     gene            3419..>3744
                     /locus_tag="VIQ50_01410"
     CDS             3419..>3744
                     /locus_tag="VIQ50_01410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015687166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359062.1"
                     /translation="MDRRTFIKAAAGVVGAGALAAPAIAQRGAARALRFVPQADLANF
                     DPIWNTQYVVRNAAALVWDMLYGFDDKLQPRRQMVESEEVSPDGRVWTFRLRPGLKFH
                     DGERVLA"
BASE COUNT          625 a         1191 c         1245 g          683 t
ORIGIN      
        1 gagacgatcc gcgacagcga gatcacgggc cggcgcacgc tggtcttcgg ggccaccgag
       61 ccgcagaaca acatcgcagg gcactggcag gaatacgcgt tcactgtgga cggcaagacc
      121 ttcgatcccg cgcgcatcga ccagcgggtg cggctgggtg cggtggagga atggacgatc
      181 cgcaacaccc accagcacga cgaccattcg ttccatatcc acaccaaccc gttccaggtc
      241 gtcgagatcg gtggccaacc gcaggccgat cggacgtggc gcgataccgt gatcgtgccg
      301 cggccggcca aaggcggcag caccgtcatc cgctcgcgtt tcctcgacta caccggcgtc
      361 ttcatgatgc attgccacat gatgaaccac gaggacttgg gcatgatgca ggcggtcgag
      421 gtctacaagg actgacgccc cctcatggct tgcactcctt cgccgaggtc aaggagctca
      481 gtccagccgg cgcgcctctt ccggcagcat gatcggaatg ccggcgcgga tgggataggc
      541 gagcttggcg gagcgggaga tcagctcctg cttttccgcg tcgtactcca gcggcccctt
      601 ggtcagcggg cagaccagga tttccaggag cttcggatcg acagtgccgg cgggacgctc
      661 gggcggggtg gtcatgacgg tctccaagct gctttgccgt cggctatagc atagcggcgc
      721 gcgtcaccga cggaaatcgg ccgcgccgct gcggatgacc gcagtcattg cagcggcgtt
      781 tccccgcccg atgttttctt ggcaagctcg atctcggtcg cggcgaccaa gatctcggcg
      841 cgggtcttga gatcgggcgc ttccagcagc gcctgcttct cggcaacgcc gtagggcgac
      901 atcatcgcca gcgcgttgac cagcgcctcg ttcggcgcgt tctcgatgcc ttcccagtcg
      961 gccttgaggt cgttggcctt gagaaagtcc gacagcgccc gcagcacgct gtcgcggtcg
     1021 acctcctctt cgcccttgcg cgcggtgaaa tcgttgatga agggaacata gctcacccgg
     1081 cactggcgat acggcgtcgc cacggtgagc tcttcgtcga tgcgaaaccg cgcgatcccg
     1141 gtgagctgaa ggaggtagcg gcggtcgccg gtctcggcga tctgggtgat gcggccgacg
     1201 cagccgacct tgtagagatt gggcttgctc tcggggccgg gatgcgcggg gtccggttga
     1261 atcatgccga tcaggcggtg gcccgtgcgc aaggcgtcgt cgatcatcgc caggtagcgc
     1321 ggctcgaaga tgttgagcgg catctgcccg cgcggcaaca acagcgcgcc cggcaaggga
     1381 aagattggga tgacgtcggc gaggtcgtcg ggcttctgat agaccgcgtt catcggcatg
     1441 gtcgcctccc ggccaggcaa ttgcgaccga aactgctcgc ctcgaccccg ccgcaacgcg
     1501 cgccacctcg acgcgcggcc agcaggatta ggaaaacaga atcgacgaca accgcttgcg
     1561 gccgttcacg gtggcctcgt cggtcggacc ccaggcctcg aagaattgga ccaactgctt
     1621 gcgcgcgccg tcatcgttcc atttgcgatc gcgcttgaca atctccagca agttgtcgac
     1681 cgcgtcttgc cgttgcccct tgccgttcaa ggcgagcgcg agatcgaatc gcgcctgatg
     1741 gtcgagcgga ttgcccgcaa ccttggcttc gaggtcggcg atcggcccga ccgctttcgc
     1801 ctgctcgctg acctcgagcg ctgcacgcgc ggcggcgacc gcgggatcgt tgcgcttggc
     1861 ttccggcacc aaggcgagcg tctgcttcgc ctgctcgagc gcgccggtgc gcacgtagct
     1921 gcgcgtgagc ccgccgagcg cggcgaggtt gccgctgtcc tgcgccagca cctgcgcgta
     1981 gagatcggcc gcgcctgcag cgtcaccttt ggcgagcaaa tcatcggcgc tcttcaagag
     2041 atcttgttcc tcgccgccga gccggtcctt ggtgaggcgt tcgatgaatg ccgtcacctg
     2101 gctttccggc aacgcgccga gaaatccgtc gaccggctgg ccgttgacga aggcaaacac
     2161 ggcgggaatc gactggatac cgagctgccc cgggatcgag gggtgcttgt cgatgtccat
     2221 cttgacgagc ttgaccttgc ccttggcggc gcggaccgcc ttctccagca ccggcccgag
     2281 ttgcttgcag ggcccgcacc attccgccca aaaatccacc agcaccggtt ggcgtttgga
     2341 ttcctcgatc acgtctttga cgaaggtctg cgtggtcgtg tccttgacca cggtgccggc
     2401 cgccgtcgcc tcgccgccct gtaacatcgt catctcgtcc gtccttcatc cttgccgccg
     2461 cgcctaggca gcgccgatcg cttaatggaa tcgatccccc gtccgtaccg cccaatttcg
     2521 atattgccgc gcgcggcgca aaaagagccc cggccgcggc gaaaccctgc atatgcccaa
     2581 ttaaatggtg tcaaacgggg gtgtttgcaa tcgataactc aatcccgcgg cgtggcctcc
     2641 tgttccgcga ccggcacgat ccggggcggg tgcccggtcg cctcgaggaa ccgctgcaag
     2701 tccgcgcccg cgatcgaggt ggtcatggtg ttgaccagcg ggtggcagtt gacagtggcg
     2761 tggcgcatca gcgcggcatc gagcaccacg ccgacgcgcc ggtcgttgtc gttcattacc
     2821 gcgaacggcg tgaccgcgcc gggctcgatg cccagcgtgg cgcgcatgag atcggcggat
     2881 ccgaaggaga agcggccgga ggcgccgaga cgccggtgca acgatttgag ctcgatcact
     2941 gcatcctcga gcgccgtggc caggaacaag gcgtctttct tgtccttgag gaacaggttc
     3001 ttcgtgtggg cgccgggtat ggttccgcgc agctcgcgcg actgctcgac ggtgaatagc
     3061 gccgggtgcg tcaccgtcgc gtgggcgatg ccgagcttat cgagaaacgc aaagagatcg
     3121 gacggcgtgg caggcatggg atgccattaa tgcgagaagc gccttcgttg gaagtgggat
     3181 cagcgggaag cgggtaagtg aggttaagac gtgggggccc agtgggatcg cggcgggatg
     3241 gttgcaaagg ctccttcctt ttggcatagg tgcttgatgg tccggcccgc tcggaggtag
     3301 cggccggaat tcggacgcgg gtgtagctca ggggtagagc acaaccttgc caaggttggg
     3361 gtcgagggtt cgaatccctt cgcccgctcc aaaatttctc aatcgccgca gcgtccgcat
     3421 ggaccgacga acgttcatca aagcggcggc cggtgttgtg ggcgccggcg cgctcgccgc
     3481 accggcgatc gcgcagcgcg gtgccgcgcg cgcgttgcgc ttcgtgccgc aggccgatct
     3541 cgccaatttc gatccgatct ggaacaccca atacgtcgtg cgcaacgctg ccgcgctggt
     3601 ctgggacatg ctctacggtt tcgacgacaa gcttcagccg cgccggcaga tggtcgagag
     3661 cgaagaggtg tcgccggacg gacgcgtttg gacgttccgc ttgcggcccg gattaaagtt
     3721 tcacgacggc gagcgggtgc ttgc
//
LOCUS       DATCWM010000078         8531 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_140981, whole genome shotgun sequence.
ACCESSION   DATCWM010000078 DATCWM010000000
VERSION     DATCWM010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8531
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140981"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(182..637)
                     /locus_tag="VIQ50_01415"
     CDS             complement(182..637)
                     /locus_tag="VIQ50_01415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012043183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SufE family protein"
                     /protein_id="HEY9359063.1"
                     /translation="MTAASTETLTTLDEIVDNFSLLEEWDDRYRYVIELGRALSPLPE
                     PERTDANKVQGCASQVWLATTVHPDGQSGPILTFIGDSDAHIVRGLIAILFAMFSGKR
                     AGDILSTDAIAVFDRLGLREHLTPQRSNGFRSMVERMRADARRALAKTG"
     gene            complement(787..1206)
                     /locus_tag="VIQ50_01420"
     CDS             complement(787..1206)
                     /locus_tag="VIQ50_01420"
                     /inference="COORDINATES: protein motif:HMM:NF036461.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5330 domain-containing protein"
                     /protein_id="HEY9359064.1"
                     /translation="MRFLLRMAFWLTVILALLPSGGSQPTPKLNVSAIEAMSAATATV
                     TDVQSFCDRQRDACTVGSQTAVAIGQRAQAGAKMLYEYLSQHLGSHDGGAANGASAEA
                     TPLPLARPSQHTLSPNDLTPAWRPPSSRKEGRTDRPT"
     gene            1803..2543
                     /locus_tag="VIQ50_01425"
     CDS             1803..2543
                     /locus_tag="VIQ50_01425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HEY9359065.1"
                     /translation="MTRLLSALGWKARDAVGFVLGACVAIAIVVNVLFLQSGSHPAPI
                     FQGASARVKLTAVADGAPTAVPRPRRTELAALPAPTKSTAPSAPRPPGEIINDIQREL
                     SRRGYYDGVIDGLYGPKTDAAIRDFEQAAALKPSTEPNEALLQSILRAPAKLVRATIP
                     ATVGARPAQTPSEAAGERPTASKRVIALQRALAEYGYGQIKPSGIIDAETQAAIEKFE
                     RERRLPITGQASDRLVRELAAMTGRPLE"
     gene            2662..3009
                     /locus_tag="VIQ50_01430"
     CDS             2662..3009
                     /locus_tag="VIQ50_01430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015687394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1491 family protein"
                     /protein_id="HEY9359066.1"
                     /translation="MRLKSAIWVAAYIRRCHIEGAFAAVRRRGAEEAGAIFVKLNRLD
                     GTAELFGPAPQSVFDDARPADRLFSRCLGEEPAPEAKIEERLARELRFDPDAWILEVE
                     DRAGRHFLDQVLA"
     gene            3252..3446
                     /locus_tag="VIQ50_01435"
     CDS             3252..3446
                     /locus_tag="VIQ50_01435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359067.1"
                     /translation="MGTVINFRPAERAAREPVITRTSKSAVVIILPVIRIERYDEAPS
                     LKPEVGSSARRRRRRRTQRS"
     gene            complement(3530..4072)
                     /locus_tag="VIQ50_01440"
     CDS             complement(3530..4072)
                     /locus_tag="VIQ50_01440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011157371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1254 domain-containing protein"
                     /protein_id="HEY9359068.1"
                     /translation="MIRLALWLLGALLLGGIVHLTTVLLLPRMATQDAYARVSGIAPV
                     NAVIPIPGPTPEKALMPFMDPAFQVSVCRYDLSQGPLKFSVPISQAYTSVSFYTRSDV
                     AYYAINDRAAGRRVIELDLMTAAQRAGLPENEEITAADRLIVTSPTNNGLIVIRVLAP
                     EAGWVPAVRTALAAAQCRPQ"
     gene            complement(4069..4647)
                     /locus_tag="VIQ50_01445"
     CDS             complement(4069..4647)
                     /locus_tag="VIQ50_01445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1214 domain-containing protein"
                     /protein_id="HEY9359069.1"
                     /translation="MRLLFGTVLALTIAAMAGLGATWMALTRGSAYGGVTIGAWTGWP
                     KNGTSGIDPYARAMVARTGELPVGSGDGVAFYARTDDAGQPLDGRCDVLLSGTTPQAR
                     FWTLTLYDPEGRLVANSTQRQGFTSQEIVRNADGTFDIMVGPRARPGNWLPTGGADKY
                     VLVLRLYDTPIGMATRTGSDAPMPSISKRACL"
     gene            complement(4707..6971)
                     /locus_tag="VIQ50_01450"
     CDS             complement(4707..6971)
                     /locus_tag="VIQ50_01450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018647811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PBP1A family penicillin-binding protein"
                     /protein_id="HEY9359070.1"
                     /translation="MRNLFQRGENRVSWKIRLQRFLLDLDARIDFGLYQAKTWGRELY
                     ERFTVFMDRFHVSGWRRWYFVEPLSEALTIGNGGLLVLLALAIPAFRETADDDWLKKS
                     ELAVTFLDRYGNEVGSRGIRHNDAIPLDQFPDHLIKATLATEDRRFYEHFGIDFPGLF
                     RAMLTNARAGGVVQGGSSISQQLAKNLFLSNERTIERKVKEAFLALWLEVRLPKNEIL
                     KLYLDRAYLGGGTFGVDAAAQFYFNKSARDVNLAEAAMLAGLFKAPSKFAPHINLPAA
                     RARANVVLDNLVEAGFMTEGQVFGARRNPATAVDRRDERSPNYYLDWAYDEMKKLVET
                     LPKSVHERVFVVRLALDVDLQKHSEQAIEDSLRQYGREYKAKQGAAVLMDIDGAVRAM
                     VGGRDYNESQFNRATDAMRQPGSSFKPYVYATALMNGFKPTSVVVDSPVCIGNWCPKN
                     YGGGHAGAMTLTQAITRSVNVIPVKLSIALGNGNPKIGRAKIRETARKAGIRTPLPDT
                     PSMPIGADEVTVLDHTGGYTMFPNLGKAMAPHAVLEVRSGAGELIWRWDRDGKKPVQV
                     ITPQVAMDMNMMMSKVVEEGTARRAILDGIKSAGKTGTTNAYRDAWFVAFTGNMVCGI
                     WFGNDDYTTMHQMTGGSLPAQTWHEIMAYAHQGIELKPIPGLGPQGPSAARVAEGKKD
                     GDAPAPASRPNSILTKRGADALVRLERLMDDATRALATRGEMTKASDDTRAPAQASFA
                     SAPEQTPPDRTRGN"
     gene            7162..7656
                     /locus_tag="VIQ50_01455"
     CDS             7162..7656
                     /locus_tag="VIQ50_01455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgN family cysteine cluster protein"
                     /protein_id="HEY9359071.1"
                     /translation="MNADDLPFWRRKSLSEMTDSEWESLCDGCGRCCLVKLEDADDSS
                     RTYFTDVGCGLLDNTTCRCRDYPNRTAKVKDCVKLTPRNINRIVWLPPSCAYRLLADG
                     RDLYWWHPLVSGDPETVHQAGISVRGRVGASEDEVEDEELEDRIVSWPARIPKAARKP
                     PSRR"
     gene            7764..>8531
                     /locus_tag="VIQ50_01460"
     CDS             7764..>8531
                     /locus_tag="VIQ50_01460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9359072.1"
                     /translation="MRDPLTPPPADYLDHAAARRIVVGVLLTMMLAALDQVMVATALP
                     TIAASLGDVENMSWVVTANLLCATATTPLYGKLSDIHGRRTMMLIAITVYAGGSLACA
                     LAPSMLTLILARALQGLGGGGLMPLVQTIIGDVASPRDRPRYQAYTSSTFIISTVGGP
                     ILGGFIAEHLHWSWIFWFNLPLCGLAFLFTHNVLQQLPRHDRRHKLDLLGALLMVGAA
                     IALMLALTWGGRRYAWASPQILLLLLVSIALWGAFAWR"
BASE COUNT         1472 a         2749 c         2795 g         1515 t
ORIGIN      
        1 tcacattccc ttcccagaat tccacatgaa ggaaggcccc ggggaggttg tcgccggggc
       61 ctagcagcct ctttcgttcc ttggggggtt cgatcgaggc caccacaagc aaccaggcaa
      121 atgccgcgcc agttccaccg atcgaacaat tctagggaac acgctgggga agggactggc
      181 tttacccagt tttcgccagc gctctgcgcg cgtccgcgcg catgcgctcg accatcgagc
      241 ggaatccgtt cgagcgctgc ggggtcaaat gctcacgcag gcccagccgg tcgaacacgg
      301 cgatcgcatc ggtcgaaaga atgtcgcccg cccgcttgcc ggagaacatc gcgaacaaga
      361 tggcgatcag accgcgcacg atatgggcat cgctgtcgcc gatgaaggtc agtatcggac
      421 cgctttggcc atccggatgc acggtggtcg cgagccagac ctggctcgcg cagccctgca
      481 ctttgtttgc gtcggtacgc tcgggctcgg ggagggggct cagggcgcgg ccaagctcga
      541 tgacatagcg gtagcggtcg tcccactcct cgaggagcga aaagttgtcg acgatctcgt
      601 cgagcgtcgt aagcgtctcg gttgaggctg cagtcatggc ctgccgcata gcgaatatat
      661 aggggggatc atagcgcgga cgaatgccgg ccgctgaaaa agatcgatcc cgagcgctgc
      721 ggcgcggact cgcgggtggg ccggcttcgg ctgccccatg cgggagggcg catcaaaaac
      781 ggggtcttac gtcggccgat cggtccgtcc ctccttgcgc gacgacgggg ggcgccacgc
      841 cggcgtcaag tcatttggcg acaacgtgtg ctgcgatggc cgcgcgagtg gcagtggagt
      901 ggcttcggcg gacgcgccat tcgcggctcc gccatcgtgc gacccaaggt gttggctgag
      961 atattcgtac agcattttgg ctccggcttg cgcgcgctgg ccgatcgcaa ccgctgtttg
     1021 cgatccgacc gtgcacgcgt cgcgctgccg gtcgcagaat gactgcacat cggtgacggt
     1081 cgccgtcgcc gccgacatgg cctcgatcgc actcacattg agtttcggcg tgggctgaga
     1141 gccgccgctt ggcagcagtg ccagaatgac ggtgagccaa aacgccatcc gcaagaggaa
     1201 tcgcatgcgt tgccttgagc tccccggccg tcaatgagtg caactgcggc gatgctagca
     1261 gcaagtgctg aaaccctggt ttttagcggc cgatgctttt tgtcgatatt cgacgcgaat
     1321 cagccgcagt ttctttacga attcccaacg atcggcattt ggctgaaatt gatcaaaagt
     1381 gcattcgccg aaatcccgtc gtcggcgggt gcccactgtg gcgagcggca tctgtcggca
     1441 accgaccgtt caccatgccc tgggaatgcg ccggtgaagt cgtgcccgaa ggaggcagaa
     1501 ataccccggg cgtcgcgcat cgttccggct ttagggttcg cttaagcggc ctctgacacg
     1561 atcccgccag acaggacagg gggcgcgtcc aaaatctctg ggtgcgcgcg agaacgtggg
     1621 ctcgatgcga ggccgttttg cccgttcgat aagcgcgttg gtgcggcagg agcggctgcc
     1681 gtcgcgcggc atcgcggcgg aacgggtcgt cccgacgttg cggctgcgcg cgacgcggcg
     1741 cggtgcataa gcccatggcg cgcgcggacc gagaaaaaag tgcggccctc gatggcaacc
     1801 gcgtgacgcg cctgttgagc gcgctgggtt ggaaggcgcg ggacgccgtc ggtttcgttc
     1861 tcggcgcctg tgttgcaatc gccatcgtgg tcaacgtgct gttcctgcag tccggctcgc
     1921 atccggcgcc gatattccaa ggcgcatccg cgcgggtcaa actgacagcg gtggccgatg
     1981 gcgcgccaac cgccgtgccg cggccacggc ggaccgaact ggccgccctc ccggccccga
     2041 cgaaatccac agccccgtcc gcgccgcgtc cgccaggcga gatcatcaac gacattcagc
     2101 gcgagctgtc ccgccgcggc tactacgatg gagtcatcga tgggctctat ggcccgaaga
     2161 cggatgccgc aatccgggac tttgagcagg ctgccgcgct caagccgagc acggagccca
     2221 acgaggcgct cctgcagtcc atcttacgag cgccagccaa gctggtgcgg gcaaccatcc
     2281 cagcgacggt cggcgcgcgt cctgcgcaga cccccagcga ggcggccggc gaacggccca
     2341 ctgcctcgaa acgcgtgatc gcgctgcagc gggcgcttgc cgaatacggc tatggtcaaa
     2401 tcaagccgag cggcattatc gatgccgaga cccaggcggc gatcgagaaa ttcgagcgcg
     2461 agcgcaggct gccgattacg ggccaggcct ccgaccggct cgtgcgcgag ctggcggcga
     2521 tgaccggccg acctctggaa tagccctcac cgcgggcgca aggcctcgcc ttcatcgaag
     2581 aaaatacggt cacccggctc tcgtcgggct cgcgcatgtg gtggaatact cggctcgaag
     2641 catgacgagc gagaagcagg aatgcgcctg aaatctgcaa tctgggtcgc agcctatatc
     2701 cgccgctgcc acatcgaggg cgccttcgcc gccgtgcggc ggcgcggcgc ggaggaggcc
     2761 ggcgccattt tcgtcaagct caatcgacta gacggcacgg cggagttgtt cggccccgcg
     2821 ccccaaagcg tgttcgacga tgcgcgtcca gcggaccggc tgttcagccg atgcctcggc
     2881 gaagaacccg ccccagaggc taagatcgag gaacgcctcg cgcgggaatt gcgcttcgac
     2941 cccgacgcat ggatcctcga ggtggaggac cgcgccggac gtcacttcct cgatcaagtt
     3001 ctcgcctgaa cggcgcgcgg ctccgcccgg gctcagggcg gcgtgagagc tcgggcaacg
     3061 caagcctcgg cgggtgccct ggagccgcca tggtcactgc gcctttgctg caacactttg
     3121 gatttgatgc tgcaacgcct cggatttgag cttgtctaga ggccggcgtt agcagagcgt
     3181 taaccttgtg agactcaaat cgcccaaggg gtcgcatcgg ggctgcggcc gcccggggcg
     3241 ggggcaatga catgggcacg gtgatcaatt ttcggccagc ggagcgcgcc gcgcgggagc
     3301 cagtaataac gcgcacgtcg aaatcggccg tggtgatcat tcttccggtg atccgcatcg
     3361 aacggtacga cgaggcgccg agcctcaaac ccgaggtggg gagtagcgca cgtcgccgcc
     3421 gccgtcgccg tacgcagcgc tcctgagcgc gaatccgttc ttcaagccaa ggactcgtct
     3481 cggcgtcggc tcagatgtcg gctgcgctag ttcggctgag aagccggagt cattgcgggc
     3541 ggcattgcgc cgcggccaag gcagttcgca ctgcaggcac ccatccggct tcaggcgcga
     3601 gcacgcggat gacgataaga ccgttgttcg tcggcgaggt cacgatcaac cggtccgcag
     3661 ccgtgatctc ctcgttctcc ggcagtcccg cgcgttgtgc cgccgtcatg agatcgagct
     3721 cgatcacccg ccggccggcc gcgcgatcgt tgatcgcata ataggcgacg tcggagcgcg
     3781 tgtagaacga caccgatgta taagcctgac tgatcggcac ggagaacttc aacggaccct
     3841 gcgacagatc atagcggcag acggacacct ggaacgcggg gtccatgaag ggcatgagcg
     3901 ccttctccgg agtcgggcca ggaatcggaa tgaccgcgtt gaccggagcg atgccggaga
     3961 cgcgggcata agcatcctgc gtcgccattc gggggagcag caggaccgtc gtcaggtgca
     4021 cgatgccgcc gagcagaagt gcgcccaaca gccataatgc caagcggatc acaggcaggc
     4081 tctcttgcta atcgagggca tgggcgcgtc cgatccggtt cgggtcgcca tgccgatcgg
     4141 cgtatcatag aggcgcagca ccagcacgta tttgtccgcc ccgccggtcg ggagccaatt
     4201 gccgggccgt gcgcggggcc cgaccatgat gtcgaaggtc ccgtcggcgt tgcggacgat
     4261 ctcctgactg gtgaagcctt ggcgctgtgt cgaattggcc accaggcgcc cttccggatc
     4321 atagagcgtc agcgtccaaa accttgcttg cggcgtggtg ccgctcaaca acacatcaca
     4381 gcggccatcg agcggctgac cggcatcgtc ggtgcgcgca tagaatgcca ctccgtcgcc
     4441 cgaaccgacc ggcagttcgc cggtgcgcgc gaccatggcg cgcgcgtagg ggtcgatgcc
     4501 ggaggtccca ttcttcggcc agcccgtcca cgcaccgatg gtgaccccgc cataggcgct
     4561 gcctcgcgtc agcgccatcc aggtcgcgcc gaggccggcc attgccgcaa tcgtcagcgc
     4621 aagcacggtt ccgaaaagca aacgcacgtt tggtccgcta gcgtagccgt tggggcggcc
     4681 ggtgtagcaa aagctgccgg ccgacttcaa ttaccgcgag tccgatcagg cggcgtttgc
     4741 tcgggcgcgg atgcaaagct tgcttgggct ggcgccctcg tatcgtccga agctttggtc
     4801 atctcgccgc gggtcgcaag cgcgcgcgtc gcatcgtcca tcagtcgctc gaggcgcacc
     4861 agggcgtcgg cgccgcgctt tgtcagaata gagttcggac ggctggcggg tgcgggtgcg
     4921 tcgccgtcct tcttgccttc ggccacacgc gccgcagacg gcccttgcgg gccgaggccc
     4981 ggaatgggtt tgagttcgat gccctggtgg gcataggcca taatctcgtg ccaggtctgc
     5041 gccggcagcg agccgccggt catctggtgc atggttgtgt agtcgtcgtt gccgaaccag
     5101 atgccgcaaa ccatgttgcc ggtgaaggcc acgaaccagg catcgcgata agcgttggtg
     5161 gtgcccgtct tgccggcgga cttgatcccg tcgaggatcg cgcggcgggc ggtaccttcc
     5221 tccaccacct tgctcatcat catgttcata tccatcgcca cctgcggcgt gatcacctgc
     5281 accggtttct tgccgtcgcg gtcccaacgc caaatcagct cgccggcgcc actgcggacc
     5341 tctagcaccg cgtgcggcgc catcgctttc ccaaggttgg ggaacatggt gtagccgccg
     5401 gtgtgatcga gcacggtgac ctcgtcggcg ccgatcggca tcgagggtgt gtccggcagc
     5461 ggcgtgcgta tgccggcctt gcgcgccgtc tcgcggatct tggcgcggcc gatcttcggg
     5521 ttgccgttgc cgagcgcgat cgacagcttc accggaatga cgttgaccga gcgcgtgatc
     5581 gcctgcgtga gcgtcatcgc gccggcgtgg ccgccgccgt agttcttcgg gcaccagttg
     5641 ccgatgcaca ccggcgaatc gaccacgacc gaggtcggct tgaatccgtt catcagcgcg
     5701 gtggcgtaga catagggttt gaacgaggag ccgggctggc gcatggcgtc ggtggcgcgg
     5761 ttgaactggc tctcattgta atcgcggccg ccgaccatcg cgcgcaccgc gccgtcgata
     5821 tccatcagca cggcggcgcc ttgcttggcc ttgtattcgc gcccgtactg ccgcagcgaa
     5881 tcctcgatcg cctgctctga gtgcttctgc aggtcgacat ccagcgccag ccgcaccacg
     5941 aacacgcgct cgtgcaccga cttgggcaag gtctcgacca gcttcttcat ctcgtcgtag
     6001 gcccagtcga ggtagtagtt tggcgagcgt tcgtcgcgcc ggtcgactgc ggtggcagga
     6061 ttgcgccgcg cgccgaacac ctggccctcg gtcatgaacc cggcctcgac caggttgtcg
     6121 agcacgacgt tggcgcgcgc gcgcgctgcc ggcagattga tatgcggggc gaattttgac
     6181 ggcgccttga acagccccgc cagcatggcc gcttctgcca ggttcacgtc gcgcgcggat
     6241 ttgttgaaat agaactgcgc cgccgcgtcg acgccgaagg tgccgccgcc gagataggca
     6301 cgatcgagat agagcttgag aatctcgttc ttgggcagcc gcacttcgag ccagagtgcg
     6361 aggaacgcct ccttgacctt gcgctcgata gtgcgctcat tcgacaggaa caggttcttc
     6421 gccaactgct ggctgatcga ggagccgccc tgcacgacgc cgccggcgcg cgcgttggtg
     6481 agcatggcgc ggaacagacc ggggaagtcg atgccgaaat gctcgtagaa gcggcgatct
     6541 tcggtggcga gcgtcgcctt gatcaaatga tcgggaaact gatcgagcgg aatcgcatca
     6601 ttgtgtcgga taccgcgcga gccgacctcg ttgccataac gatcgaggaa ggtgacagcg
     6661 agctcggatt ttttcagcca gtcgtcgtcg gcggtttcgc ggaaggcggg gatggcgagc
     6721 gccagcagga ccagcaggcc gccattgccg atggtgaggg cctccgacaa cggctcgacg
     6781 aaataccagc gccgccaccc ggagacatgg aagcggtcca tgaagacggt gaagcgctcg
     6841 taaagctcgc gcccccaggt cttggcctgg tacagcccga agtcgatgcg ggcatcgaga
     6901 tcgagcagga accgttgcag cctgatcttc cagctgaccc gattctcgcc gcgttggaag
     6961 agattgcgca agatttccct ctgagccgaa gtctacccgc ggcggggcgc ccgcgcccaa
     7021 ccggtgcacg caaggtttaa ccgatccagg ggttccaaac tatggcggca ttgtcacaag
     7081 atgaatagca ggcgagggga caatgcgaag ggtcgacgat cgatccctgg caagcctagt
     7141 ctgcgacaag gcgactcacc catgaatgct gacgatctcc cgttctggcg ccgtaagtca
     7201 ttgagcgaaa tgacggattc ggagtgggag agcctttgcg acggctgcgg gcggtgctgc
     7261 ctggtgaagc tggaagacgc cgatgactcc tcacgcacct acttcaccga tgtgggctgt
     7321 ggcctgttgg acaacaccac ttgccgctgc cgcgactatc ccaaccggac tgccaaggtg
     7381 aaggactgcg tcaagttaac ccccagaaat atcaaccgaa tcgtctggtt gccgccaagc
     7441 tgcgcctacc gcctcttggc cgacggccgt gacctctatt ggtggcaccc gctcgtttca
     7501 ggagatccgg agaccgtgca ccaggccggg atctcggtgc gcgggcgcgt cggcgcgagc
     7561 gaggacgagg tcgaggacga ggagcttgag gaccgcattg tgagttggcc cgcacgcata
     7621 ccgaaggcgg cgagaaagcc cccatcgcgc cgataaaccc cgcattggcg catggcgccg
     7681 tcgcgccccg acgccttgtg ctcgccgccg ttccccgcgt agatgccccg cgccttgccg
     7741 cccgggccgg cgcaggcgaa atcatgcgcg acccgctcac gccgccgccg gcggactacc
     7801 tcgatcacgc cgccgcgcgg cgcatcgtcg tcggcgtcct cctgaccatg atgctcgcgg
     7861 ccctcgacca agtgatggtt gcgaccgcgc tgccgaccat cgccgctagt ctgggcgacg
     7921 tcgagaacat gtcatgggtc gtcaccgcca atcttttgtg tgcgaccgcg acgaccccgc
     7981 tctacggcaa gctctccgat atccacggcc gccgcaccat gatgctgatt gcgatcaccg
     8041 tctatgccgg cgggtcgctc gcctgcgcgc tggcgccatc catgctgacg ctgattctcg
     8101 cccgcgcgct tcagggtctc ggcgggggcg gcctgatgcc gctagtgcaa accatcatcg
     8161 gcgacgtcgc ctccccgcgc gatcgaccgc gttatcaggc ctatacgtcg tcgaccttca
     8221 tcatatcgac cgtgggcggc ccgattctcg gcggcttcat agccgagcat ctgcattggt
     8281 cctggatctt ctggttcaac ttgccgctct gcgggctcgc ctttctgttc acgcacaacg
     8341 tgctgcagca attgccgcgc cacgatcgcc ggcacaagct cgatcttctc ggggcgctgc
     8401 tgatggtcgg ggcggcaatc gcgctgatgc ttgcgctcac ctggggcggg cggcgctatg
     8461 cctgggcatc gccccagatt ctcttgctgc ttctcgtgtc catcgccctc tggggcgcgt
     8521 tcgcctggcg c
//
LOCUS       DATCWM010000079         2484 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_454010, whole genome shotgun sequence.
ACCESSION   DATCWM010000079 DATCWM010000000
VERSION     DATCWM010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2484)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2484)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2484
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_454010"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(75..929)
                     /locus_tag="VIQ50_01465"
     CDS             complement(75..929)
                     /locus_tag="VIQ50_01465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9359073.1"
                     /translation="MNGLMLGSIYAMVAVALTLSIGVLRFLNFSIPGLFMIGGMTAWA
                     SLRAGLPWPLAIAAALVAGAFASLVVERFTWRWMRGAQDFVPLVSSMAFLLLFEHLAV
                     IYWGSELRTVPPLFANTDWRVAGLVISLPQLGGLVASIALIWALTLALARTRLGRGLR
                     TIAEDSDTALLLGVEINRIVPVLFLISGLFAALAGVIFALNYRQVQPFMGEMVGLKGI
                     SAMIVGGMGSVWGSIAGGLIIGLVEVMSIGYFGADFVDIAVYGLLLLILFVRPTGLFA
                     AAFAGQRA"
     gene            complement(1176..1778)
                     /locus_tag="VIQ50_01470"
     CDS             complement(1176..1778)
                     /locus_tag="VIQ50_01470"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEY9359074.1"
                     /translation="MSISRLARARRRAKRDTSAAYVLPPTVSRADLLKKGSDRPFRTL
                     VNDLFTIASRMEIVRAHLGRRMGISGPQYSVLIAIAHLQGETGVRVGTLARAMHVSSA
                     FIASETGKLARLGLLLKRPNPQDRRGVLLTLTRAGGHEIDRLSAEIRAINDLFFGSLD
                     AKSFTALCAAAQALVKGSAKAMHYLNTVEHESLLALKAAE"
     gene            complement(1765..2397)
                     /locus_tag="VIQ50_01475"
     CDS             complement(1765..2397)
                     /locus_tag="VIQ50_01475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359075.1"
                     /translation="MDAIAPPKPKVLFEAEPFIPYMREEDFDPRLAPVVEPYKKRMGF
                     LPNALKLYAHRPEIAETLWKLNSNVMRDPSSTLDQLLKRKLAAVACATNGCAYCTAHS
                     CAMLKKSTGTGAEGWGLSEEELQDIITGVYEPKNEMERVCFDYVRSASEDATSVPDEI
                     LQRLRQHLSPPQIVELACVVGFWKFYNTVHDSLHIPVEATLLRDTGYVDL"
BASE COUNT          504 a          777 c          792 g          411 t
ORIGIN      
        1 gagcggcagg aagccgccat aggcgaagac cacgttgacc gcgagcagaa ccataatgcc
       61 ttcgagatat ccgctcatgc gcgctgtccc gcgaaagctg cggcgaacag tccggttggt
      121 cggacgaaca gaatgagcag cagcagtccg tagaccgcga tgtcgacgaa gtcggcgccg
      181 aaatacccga tcgacatcac ctcgaccaag ccgatgatca gtccgccggc gatcgagccc
      241 cagacgctgc ccatgccgcc gacgatcatg gccgagatgc ctttgagacc gaccatttcg
      301 cccatgaacg gttgcacctg gcggtagttc aacgcgaaga tcacgccggc gagcgcggca
      361 aacaaaccgc tgatcaggaa tagcaccggg acgatgcgat tgatctcgac cccgagcagc
      421 agcgcggtat cggaatcttc ggcgatcgtg cgcaggccgc ggccgaggcg ggtacgtgcc
      481 agtgccagcg tcagtgccca gatcagcgcg atcgacgcga caagcccgcc aagttgcggc
      541 aggctgatca cgagaccggc gacgcgccaa tcggtattgg cgaacagcgg cggcacggtg
      601 cgcagctccg atccccaata gatcaccgcc aaatgctcga acagcagcag aaaggccatc
      661 gagcttacca gcggcacgaa atcctgcgcg ccgcgcatcc agcgccaggt gaaccgctcc
      721 accacgagcg aggcgaacgc ccccgcgaca agggctgctg cgattgcaag cggccaggga
      781 agtccagccc gcagtgacgc ccacgccgtc atgccgccga tcatgaataa gccggggatg
      841 ctgaaattga ggaagcgcag aaccccgatg ctcagcgtca aagcgacggc gaccatcgcg
      901 tagatggagc caagcatcag gccgttcacg atctgctggg agaaaatgac aacgccctcg
      961 atctcgcgcc cggcgctcca tcctagcctt cgatcagaac accagcttgc cgatcacggc
     1021 cgcatgcgtc acttcgccgc tgagtggcga gaagcggtga gaatcctcac gcgcgcttcc
     1081 gccgggagcg gcgctcaagg ttgacacatc agcgaacgac cacaagcaca tttttcgcgc
     1141 gcggcgcgat cattccggcg tcagctcacg tcggctcatt cggccgcctt gagcgccaat
     1201 aacgattcat gctcgaccgt gttcaagtag tgcatggctt tcgcggaacc ttttaccaac
     1261 gcttgcgcgg cggcgcacag agcggtgaac gacttggcat cgagcgagcc gaagaacagg
     1321 tcgttgatcg cgcggatctc ggcgctgaga cgatcgatct cgtggccgcc ggcgcgcgtc
     1381 aaggtgagca gcaccccgcg tcgatcttgg ggattgggcc gcttcagcag cagtccgagg
     1441 cgcgcgagct tgccggtctc cgacgcaatg aaggcgctcg atacgtgcat cgcccgggcg
     1501 agcgtcccga ccctgacgcc ggtctcgcct tgcaggtgcg cgatggcgat cagaacactg
     1561 tattgtggcc cgctgatccc catgcgccgg ccgagatgcg cgcgaacaat ctccatccgg
     1621 cttgcgatgg tgaagagatc attgacgaga gtgcgaaacg ggcggtcgga gcccttcttg
     1681 agcaagtccg cgcgggagac ggtgggcggc aacacataag ccgcggacgt atcccgcttc
     1741 gcgcggcgcc gtgcgcgcgc aagcctagag atcgacatat ccggtgtcac gcagcagcgt
     1801 cgcctcgaca ggaatgtgca ggctgtcgtg tacggtgttg tagaatttcc agaaccccac
     1861 gacgcaagcg agttcgacga tctgcggcgg gctgagatgc tgccgcagcc gctgaagaat
     1921 ctcgtcgggg accgaggtgg catcctcgga agcggagcgg acgtaatcga agcagacgcg
     1981 ctccatctcg ttcttcggct cgtagacgcc ggtgatgata tcttgcagct cttcctcgct
     2041 cagtccccag ccctcggcgc ccgtgcccgt cgattttttc aacatcgcgc agctgtgggc
     2101 ggtgcaatag gcacagccgt tggtcgcgca ggcgaccgcg gcaagtttgc gcttgagcaa
     2161 ttgatccagc gtcgagctcg ggtcgcgcat gacgttgctg ttgagcttcc acagcgtctc
     2221 ggcgatctcg ggccgatggg cgtagagctt gagcgcattc ggtaggaatc ccatgcgctt
     2281 cttgtagggc tcgaccaccg gcgcgaggcg gggatcgaaa tcttcctcgc gcatgtaagg
     2341 gatgaacggc tcggcttcga acagaacctt cggcttgggc ggggcaatgg catccatgac
     2401 ggggctcctt cagaggtagt cggaaagctt gaccttgccc cagttgcggg gccaggcgcg
     2461 ttcgaaatcg gcgggatcgt ggcg
//
LOCUS       DATCWM010000080         5319 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_38496, whole genome shotgun sequence.
ACCESSION   DATCWM010000080 DATCWM010000000
VERSION     DATCWM010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5319)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5319)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5319
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38496"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..368)
                     /locus_tag="VIQ50_01480"
     CDS             complement(<1..368)
                     /locus_tag="VIQ50_01480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018062961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEY9359076.1"
                     /translation="MTRPFEGIRVIDVTHVLAGPFATYQLGVLGADVIKVEHPEEPDQ
                     SRGSGTDKALNRRNMGTAFLTQASNKRGITLDLKRPADRDVLKKLVATADIFVENYRP
                     GAFEALGLGYETLAAINPRL"
     gene            complement(802..1428)
                     /locus_tag="VIQ50_01485"
     CDS             complement(802..1428)
                     /locus_tag="VIQ50_01485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015316336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HEY9359077.1"
                     /translation="MRRLIIGMTGSTGAIFGVRMLEALRESEVETHLIISKWAQRTLE
                     HETRYTVEQVRALAGVVHSQGDMGASISSGSFKTDGMAVMPCSVHTLAGIANGYGEHL
                     VHRAADVVLKERRRLVLVVRETPLSEVHLENMLKLARMGVTIVPPVPAFYNHPQTVDD
                     IVNHIVARVLDQFDLPAPFAKRWDGHLHTATKIATVAGSSSPAAKSGT"
     gene            1722..2660
                     /locus_tag="VIQ50_01490"
     CDS             1722..2660
                     /locus_tag="VIQ50_01490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359078.1"
                     /translation="MGTSANTSNGMIAVDKIGTKVLFLNPVSFATEVVLDGFPRTVHE
                     LLVVPDTGFAYVPIFGDGIHGRNPNPGHLLCIIDLHRRAHVGDIDLTPYIAPHTLRLA
                     PDGMIYITCENSAVVATIDPTTHKVVGAIDSGSTNGHRLVISPDGQRLYTENEEDATV
                     SVIDLPGRRLLGKIETPRPLAGIAISPDGRTIVAVDDAQPALFLIDTAVGRVSDEVRL
                     EGVPKPAQIARYAPDNNLIVVTSLNSGTVSLIDPSFRQQTAIKVGSQPMDMAFRGDEL
                     FVACQGDGSVHVIDMVERRAKRSFRAGAGCECLGFF"
     gene            complement(2676..3644)
                     /locus_tag="VIQ50_01495"
     CDS             complement(2676..3644)
                     /locus_tag="VIQ50_01495"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9359079.1"
                     /translation="MLKSPTFLLITMAAAVVNATPAAAQPYPSKPVRIITANSPGGTS
                     DVFVRALADELQKRWAQPVIIENRSGGGMNIAGRACADSSNDGYTICILPNETLTLNQ
                     FTYKSIPFDPAKDFEPITNAFINTQVLVVSAALNVSSLDELAALSKAKPGTLSYSALA
                     IPMQITMENWKQKTGADLISVPSRGGGDIVTGLLTGTTPVAIVGLPNFIAHIRSGTVK
                     ALAVDSDTRSPLFPEVPTLNELGFPNLAPVYFAFVAPAGTPKPIIDKLHEEISRIGNE
                     PSFRQKRLIDIGIQPVFDAPERFARYLEEQRANSARLIRDSGFQAR"
     gene            complement(3739..4002)
                     /locus_tag="VIQ50_01500"
     CDS             complement(3739..4002)
                     /locus_tag="VIQ50_01500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359080.1"
                     /translation="MAIVLRALFIGALIAVTVRVSSPQSETLSSVYETPGDLIRLALG
                     FAVGLWIVIHLFMLPRTAEGYRTWVYLGLVIVPLAWAVAIYIW"
     gene            complement(4305..>5319)
                     /locus_tag="VIQ50_01505"
     CDS             complement(4305..>5319)
                     /locus_tag="VIQ50_01505"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEY9359081.1"
                     /translation="FFNDSKYSVTVDLKKPAGVALARRMAQWCDLIIENMRPGVMERL
                     GLGFAALAERNPRLVMLSTCNMGQTGPRSDQPGFGSQLSALAGMCELTGVPEGPPMLL
                     YGPYIDYIASLLGASAALAGVIRSRQTGKGALIDLSQYECGLVFMGAALQEFFAGGRV
                     PTRCGNDDPVAVPHGAFLCHDREWVTLSCWSDDDFVALARAIGEGNLAGEPRFATAPA
                     RRANSRALDAVISAWTGQRSAEAAAIGLQAAGVAAYPVVSMAGLFSDPQLRARRQFRV
                     RRHPEMGDHAYCYPGFDLAEAPGDIVGPAPCVGADNDFVFRDLIGLSEAEYDSYRQHG
                     VFD"
BASE COUNT          999 a         1646 c         1695 g          979 t
ORIGIN      
        1 atcagccgcg gattgatcgc tgcaagcgtc tcatagccta gccccagcgc ctcgaacgcg
       61 ccgggccggt agttctcgac gaagatgtcg gccgtggcga cgagcttttt gaggacgtcg
      121 cgatccgccg gccgtttcag gtcgagggtg attccgcgct tgttggaggc ttgcgtcagg
      181 aacgctgtgc ccatattgcg gcggttgagc gccttgtcgg tgccggaacc gcggctctga
      241 tcgggctcct cggggtgctc gaccttgatc acgtcggccc cgagcacgcc caattgatag
      301 gtcgcaaacg gcccggccag aacatgcgtg acgtcgatca ctcgtatgcc ctcgaacggt
      361 cgcgtcatct cggtctcctt atcgatttgt ctctgctcag cgggggctgg aagtgacgga
      421 tggcgttcgc ggctcgcgat cacgcatctt caggccgatg aataagcttg taagtgggaa
      481 ctttggtcga gtcccacctg tccatcgttt gctggcacac gacgcatttc gcaacgttac
      541 tttcgcttcg ggggagccgc gaatgcgtca ccgaataaag tgctccgcag tggggacaaa
      601 agaacgtccc gccggtggaa atcggtccgg tgagaggcat gcgggagcct ccgtcgacca
      661 acccagtatg cgccgcgacg aaagagaatt ccagcgcgca cggggagcat agcccagatc
      721 gagcaaagcg aaatccgcgt cagccgccag ccgtggcgaa ggtcgctagc tccatccggg
      781 ctgtggaccc taaatggaca ctcacgtccc gctcttcgcg gccgggctcg agcttcccgc
      841 caccgtggcg atcttggtcg cggtatgcag gtggccatcc cagcgcttgg cgaagggcgc
      901 gggcaaatcg aactggtcga gcacgcgggc gacgatgtga ttgacgatgt cgtctaccgt
      961 ctgcgggtga ttatagaacg ccggcaccgg gggtacgatg gtcactccca tgcgggcaag
     1021 cttgagcatg ttctcgagat gcacctcgga tagcggcgtt tcgcgcacca ccagcacgag
     1081 ccgccggcgc tccttgagca cgacatcggc ggcgcgatga accaggtgct cgccgtagcc
     1141 gttggcgatg ccggcaagcg tatgcaccga acacggcatg accgccatgc cgtcggtctt
     1201 gaacgagccg gaagagatcg aagcgcccat gtcgccctgg ctatgaacga ccccagcaag
     1261 cgcgcgcact tgctcgacgg tgtagcgggt ctcgtgctca agtgtacgct gtgcccactt
     1321 gctgatgata aggtgggttt cgacctcgct ttccctgagc gcctcgagca tgcgcacgcc
     1381 gaagatcgcg ccggtcgagc cggtcatgcc gataatgagc cgccgcattc ggtttcctcc
     1441 gccgtgacct gcgatcaacg cgcatcatgg ccgtttgtat gccagcaaac gcacgaaatc
     1501 cattgtgttg caaggatgtc ccgggctcta ttctcacccg cggccaagga tcaaggggaa
     1561 gggttaagcc cgcaggatcg ccatcgcgtc tgtcttgcct gcgctcggcg ctcagctgcc
     1621 gggttactct tgcaaaacga ggcagaagcg catctcgcaa cgttcaagcc gggctactgc
     1681 ctggcgaccg tggtaagatg catcggcagc gaaggaacga catgggcact agcgccaata
     1741 cctcgaatgg aatgatcgca gtcgacaaga tcggcacaaa agttctgttt ctcaatcccg
     1801 tcagttttgc gaccgaggtt gtactcgacg gctttccccg cacggtgcac gagctcctgg
     1861 tcgtgccgga caccgggttc gcctatgtgc cgatcttcgg cgacggaatc cacggccgca
     1921 atcccaatcc gggtcatctt ctttgcatca tcgacctgca cagacgcgcc catgtcggcg
     1981 atatcgacct cacaccttat attgcgccgc atacgctcag actcgcgccc gacggcatga
     2041 tctacatcac ttgcgagaac agcgccgttg tggcgaccat cgaccccacc acgcacaagg
     2101 tggtcggtgc catcgattcc ggatccacca acggccatcg gctggttatc tcgccggatg
     2161 gtcagcggct ctataccgag aacgaggagg acgccacggt ctcggtgatc gatcttccgg
     2221 gacgaaggct gctcggcaaa atcgagaccc cgcgcccgct cgccggcatc gcgatctccc
     2281 cggacggccg gacgatcgtg gcggtcgacg acgcgcaacc tgcgctgttc ctgatcgata
     2341 ccgcagtggg ccgcgtttcc gacgaagtgc gcctggaagg cgtgcccaag ccggcacaga
     2401 tcgcgcgata tgcgcctgac aataatctga tcgtcgtcac cagtctcaat agcggcacgg
     2461 tgagtctcat cgatccctcg ttccggcagc aaaccgcgat caaggtgggc agccagccga
     2521 tggatatggc gttccgcggt gacgaactat ttgtcgcttg ccagggcgac gggtccgtcc
     2581 acgtcatcga tatggtcgaa cgccgggcga agcgcagctt ccgcgctggc gcgggttgcg
     2641 agtgcctcgg ctttttctga gatctcgggc agtgatcagc gtgcctggaa gccggagtcg
     2701 cgaatgagcc gcgccgagtt tgctcgctgt tcctccaaat aacgggcgaa tcgttcgggc
     2761 gcgtcgaaaa ccggttgtat gccgatgtcg atgagccgtt tttggcggaa cgacggctcg
     2821 ttgccgatgc gactgatctc ctcatgcaat ttgtcgatga tgggcttggg agtgccagcc
     2881 ggggcaacga atgcgaagta aacgggcgcc aggttcggaa agcccagctc gtttagggtc
     2941 ggcacctcgg gaaacagcgg agatcgggtg tcggagtcga cggcgagcgc tttgaccgtg
     3001 ccgctgcgga tgtgagcgat aaagttgggt aatccgacga tcgccaccgg cgtcgttccg
     3061 gtcaaaagac cggtcacgat gtcgccgccg ccgcgagagg gaacgctgat gagatcggcg
     3121 ccggtcttct gcttccagtt ctccatggtg atctgcatgg gaatggccag cgcgctatag
     3181 ctcaaggtcc cgggtttggc tttggaaagc gcagcgagct cgtcaagcga gctaacgttg
     3241 agcgccgcgc tcaccaccag gacctgggtg ttgatgaagg cgttggtgat gggctcgaaa
     3301 tccttcgccg gatcgaacgg gatcgactta taggtaaatt ggttcagcgt cagcgtctcg
     3361 ttgggcagaa tgcaaatcgt atatccatcg tttgacgaat cggcacacgc gcggccggcg
     3421 atgttcattc ctcctccgga gcgattctcg atgatcaccg gctgagccca gcgcttctgc
     3481 agctcgtccg cgagcgcacg gacgaacacg tcgctggtcc cgcccggact gttggcggta
     3541 atgatccgca ccggcttgct cggatagggt tgggcggccg caggcgttgc gttgacgact
     3601 gccgcagcca tcgtgatgag caggaaagtt ggcgatttca acatgctctc gctcgtccgt
     3661 cccgatgcac gacagatggg cttgcccgtt tgcgaccctc cctccgccgg cgcgtgatcg
     3721 gttggacgac taaaggcatc accagatgta gatagccacc gcccatgcaa gcgggacaat
     3781 caccaagccg aggtaaaccc acgtcctata tccctcggcg gtccggggaa gcatgaagag
     3841 atggatcacg atccacagcc ccactgcgaa tccgagcgca agcctgatga gatcgcccgg
     3901 cgtctcgtag acggagctaa gagtctcgct ctgagggctg ctgacgcgta ccgtcaccgc
     3961 gatgagcgcc ccaataaaca gcgctcgaag gacgatagcc actattcgca ggctaatcgg
     4021 gatagttgct gccgaggtcc cgacgtcgga tggaccaggc tgctgcgagt tggcgctcat
     4081 aatttgatct ggcgccgcta gccatccctc cgttgccact ccgagcttta gttcgtgcgg
     4141 gcaagttccg caatgccgag agcgcaatac aggggcaatc tcccggtatc cctgtgcggc
     4201 cgatggggcc ccttgaagtg cgggtgttca ccggaagagt tcgggccgag cgacttcgct
     4261 cggcccgcga atccggctca agctagcctc caggagtaca cgtctcaatc gaacacgcca
     4321 tgctggcgat aggagtcgta ttccgcctcg ctcagtccga tgaggtcgcg gaacacgaaa
     4381 tcgttatcgg cgccgacgca gggagccggt ccgacgatat cgccgggagc ttcggcgaga
     4441 tcgaacccgg ggtagcaata ggcgtggtca cccatctccg gatggcgccg cacgcggaat
     4501 tgccggcggg cgcgaagctg cgggtcggag aacaggccgg ccatgctcac cacgggataa
     4561 gccgcgacgc cggccgcctg caagccgatg gcggcggcct cggcactccg ttgcccggtc
     4621 caggccgata tgacggcatc gagggccctg ctgttcgcgc gccgcgccgg cgccgtcgca
     4681 aagcgcggct cgccggcaag gttgccctcg ccgatcgctc gcgcgagcgc cacgaaatcg
     4741 tcgtccgacc agcacgacaa ggtgacccat tcccgatcgt ggcacaggaa cgcgccgtgc
     4801 ggcacggcga ccgggtcatc gttgccgcag cgggtgggaa cgcggccgcc ggcgaagaac
     4861 tcctgcagcg ccgcgcccat gaacacgagg ccgcattcgt attgcgacag atcgatcagc
     4921 gcgcccttgc cggtctgccg actgcggatg acgccggcga gcgcggccga ggcgccgagc
     4981 agtgaggcga tgtagtcgat atagggaccg tagagcagca tcggcggacc ttcgggaacg
     5041 ccggtcaact cgcacatgcc ggcgagtgcc gagagctgcg agccgaagcc gggctggtcc
     5101 gagcgcggcc cggtctgccc catattgcag gtcgagagca tcaccagccg cgggttgcgc
     5161 tccgcgagcg cggcgaaacc gaggccgaga cgctccatca cgcctggccg catgttctcg
     5221 atgataaggt cgcaccattg cgccatgcgg cgcgcgagcg cgacacccgc gggcttcttg
     5281 aggtcgacgg tgacgctgta tttcgagtcg ttgaagaag
//
LOCUS       DATCWM010000081         3506 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_11399, whole genome shotgun sequence.
ACCESSION   DATCWM010000081 DATCWM010000000
VERSION     DATCWM010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3506
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11399"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..494)
                     /locus_tag="VIQ50_01510"
     CDS             complement(<1..494)
                     /locus_tag="VIQ50_01510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HEY9359082.1"
                     /translation="MTTLLLAEHDNTHLKEATAKALTAAGQLGGDVHLLVAGSRCRSV
                     AEEAAKLDGVAKVLLADAPPYEHFLPECVAELLKSVAGSYDALVAPSTANGRNIMPRL
                     AALLDVMQISDMMKVVGPDTFERPVFAGNVIETVRSRDAKKVFTVRTTAFQAAGNGGT
                     ASIEA"
     gene            complement(494..1243)
                     /locus_tag="VIQ50_01515"
     CDS             complement(494..1243)
                     /locus_tag="VIQ50_01515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HEY9359083.1"
                     /translation="MKVMVPVKRVVDPNAKVRVKPDGSGVDLSNLKMSINPFDEIAVE
                     EAVRLKEKGLVSEIVCVSIGPPRAEEAIRSSLALGADRGILVGFQGELEPLAVAKILK
                     AIALEEAPNLIILGKQAIDYDCDQTGQMLAALLGWPQGTFASKVVVEGSAVIVTREVD
                     GGHQTVKLNMPAIVTTDLRLNEPRFAALPAIMQAKKKPVVKKSVDAFGIDTAARLEIL
                     KMAEPPARKGGVKVKTTQELVEKLRKEAGVL"
     gene            complement(1276..2469)
                     /locus_tag="VIQ50_01520"
     CDS             complement(1276..2469)
                     /locus_tag="VIQ50_01520"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007792039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEY9359084.1"
                     /translation="MVDFSSFVAAPGAAVILSDFGADVIKVEPPSGDPWRHVHKIPPQ
                     PVADEPYQWHLVNRNKRSITLDLKSPSAPQVLQQLVTWADVFIVNTPHPARKRLRLEY
                     DDVVRWNPRLIYADLTGFGERGPDADLPGFDITAYWARSGLLSMTRDAGAPPTWPVAG
                     SGDNATGVGIYSAIVTALYRRERTGKGAYVTTSLLAEGVWAASVSIQAALAGAKFYGL
                     HDRMHPANAALNVYSAADGTWFVLMVTPDKLAAVAKAIGRADLLTDPRFSDPAKLMAN
                     MPQLTSILDEVFSAQPMAHWHKVFSGVHVTFGAVRGPQEVINDPQLVANDILVPLNGV
                     GGKLTSTISNPIQVHGVAKVPAHRGPNLGEHTEEILRELGFDEKDIDGLRAGGAVPKI
                     REHVA"
     gene            2806..>3506
                     /locus_tag="VIQ50_01525"
     CDS             2806..>3506
                     /locus_tag="VIQ50_01525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014493454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEY9359085.1"
                     /translation="MVPHSQNVAYSDGGSQVLWQDGERVFRRGWRPGDDGKRRAVLLV
                     APVADHPSRSSLDRLAHEYELRNELDRLWAVRPLELVRDTGGTILVLEDEGSEPLDRL
                     LGAPMEVGRFLRLAILVAAALGRLHQRGLVHKDIKPANILLNDATGEVRLTGFGIASR
                     IVRERQSPHPPEMIAGTLAYMAPEQTGRMNRSVDSRSDLYALGVTFYQMLTGALPFIA
                     TEPMEWVHCHLARWPV"
BASE COUNT          616 a         1096 c         1081 g          713 t
ORIGIN      
        1 gcttcgattg aagctgtccc gccgttcccc gccgcttgga atgccgtggt gcgcacagtg
       61 aacacctttt tggcatcacg cgaccgaacg gtttcaatga cgtttccggc gaagaccggc
      121 cgctcgaatg tgtccggccc gaccaccttc atcatgtcgg agatttgcat gacatcaagc
      181 aacgcagcga ggcgcggcat gatgttgcga ccgttggccg tcgacggtgc tacgagtgcg
      241 tcatagctgc cggccaccga tttcaggagt tccgcgacgc actcgggcag gaagtgctcg
      301 taagggggcg cgtcggcgag aagaaccttg gccacgccgt ctaatttagc ggcttcctcg
      361 gccaccgaac ggcaacgtga gccggcaaca agcaagtgaa cgtcgccgcc caactgcccg
      421 gctgcggtca gcgccttggc ggtcgcctct ttgagatggg tgttgtcgtg ttcggccagc
      481 aacagcgtcg tcatcacagt actcctgctt ctttcctgag tttttcaacg agttcctgag
      541 tggtcttaac cttgacgccg cctttgcgtg ccggaggctc cgccatcttc aggatttcca
      601 accgggcggc ggtatcgatg ccgaaggcat cgaccgactt tttgacgacc ggctttttct
      661 tggcctgcat gatggccggc agggccgcga agcgcggctc gttgaggcga agatcggtgg
      721 tgacgatcgc cggcatgttg agctttacgg tctggtgacc gccatcgact tcgcgggtca
      781 cgatcaccgc gctgccctcg accaccactt tcgaggcgaa ggtgccttgc ggccagccaa
      841 gcagtgcagc gagcatttga ccggtctgat cgcagtcata gtcgatcgcc tgcttgccca
      901 agatgatcag attcggggct tcctcgaggg caatcgcttt aaggattttt gctaccgcaa
      961 gcggctccaa ttctccctga aaaccgacca ggatgccgcg gtcggcgccc agcgccaagg
     1021 acgaacgaat ggcttcctcg gctcgcggcg gccctatcga gacgcagacg atttcggaca
     1081 ccagaccttt ttctttcagc cggacagcct cctcgacggc gatttcatcg aacggattga
     1141 tggacatctt gagattggag aggtcgacac cggagccatc gggcttgacc cgaaccttgg
     1201 cgttgggatc gacaactcgt ttaacgggta ccataacttt cattggctac tccttgcgcc
     1261 gctcgagact gtgcttcagg ccacgtgttc cctgattttc ggcaccgcgc cgcccgcgcg
     1321 cagaccgtcg atgtccttct cgtcaaaccc cagttcccgg agaatctctt cggtgtgctc
     1381 gccgagattg ggcccgcggt gggccggaac cttggcgaca ccgtgcactt gaatcgggtt
     1441 gctgatggtc gaggtcagct tgccgccgac gccattgagc ggaacaagga tgtcgttcgc
     1501 cacaagctgc gggtcgttga tcacctcttg cggcccgcgt acggcgccga acgtgacgtg
     1561 cacgccgctg aaaaccttgt gccagtgcgc catcggctgc gcagagaaga cctcgtcgag
     1621 aatggaggtg agctgcggca tattcgccat cagcttcgcc ggatcggaga accgcggatc
     1681 ggtcaggaga tccgcccggc cgatcgcctt cgccacggcg gccaacttgt cgggcgtgac
     1741 catgaggacg aaccaggtgc cgtcggctgc ggaatacacg ttgagcgccg cattggccgg
     1801 atgcatgcga tcatgcagcc cgtagaactt cgcgccggcc agcgcggcct ggatggaaac
     1861 actcgccgcc cagacaccct cggcgagcag cgaggtcgtg acgtacgccc ccttgccggt
     1921 acgctcgcgg cggtacagcg ccgtgacgat cgccgaatag attccgacgc ctgtcgcgtt
     1981 gtcgccgctg ccggccaccg gccaggtcgg cggcgcgccg gcatcgcgcg tcatcgacag
     2041 caaaccgcta cgcgcccagt atgccgtaat gtcgaagccc gggagatcgg catccggccc
     2101 cctttcgcca aagccggtaa ggtccgcata gatcaggcgt gggttccagc gcaccacgtc
     2161 gtcgtattcg agtctcaacc tcttgcgcgc gggatgtggt gtattgacga tgaatacatc
     2221 ggcccacgtc acaagctgct ggaggacctg aggggcgctg ggtgacttca ggtcgagtgt
     2281 gatgctgcgc ttgttgcggt tgaccagatg ccactgatag ggttcatcgg ccaccggttg
     2341 cggcgggatc ttgtgcacat gtctccacgg gtcgccgctc ggcggttcga ccttgatgac
     2401 gtcggcgccg aagtccgaca ggatgaccgc ggcgccgggc gccgcgacga agctcgagaa
     2461 gtccaccacc ttgagtccgg aaaagatgtt gtcgcttgtc attgcgtctc tccaaaaatc
     2521 gtcgtgcttg cttcaccggc cctggaatcg tgcggcgcgc tttccggcct ttccttcgat
     2581 gtcacagtcg tccgtctcgc cttgcctcgg tgggcatctg tttgaccgat atgtgccgtc
     2641 gtcgcgagta aaaccctgct attcgcgccc aattgctgct aaggcgaggc tggcgtttct
     2701 cagccgatcg gatacgattt ctgcgggccg catagggccg cgcctggcgc acggaaggct
     2761 tgactaaccg gaactcattt ggagttcgga tgcggagtct aacagatggt gccgcactcc
     2821 cagaacgtcg cgtactcgga cggtggctct caggtcttgt ggcaggacgg tgaacgcgta
     2881 tttcgccgcg gttggcgacc gggcgacgac ggcaaacggc gcgccgtgct gcttgttgct
     2941 cctgtcgccg accacccgtc tcgctcaagc ctcgatcgtc tcgcgcacga atacgaacta
     3001 aggaacgaac tcgacaggtt gtgggcagtg cgcccgctag aactcgtacg cgacactggt
     3061 ggcacgatac tggtgctcga agacgagggg agtgagccgt tggaccggct gctcggcgca
     3121 ccgatggagg tgggacgctt cttgcgcctc gccattcttg tcgcggcagc tcttggcaga
     3181 cttcaccagc gtggcctcgt ccataaagac atcaagccgg ccaacatcct gctcaacgac
     3241 gcaaccggcg aggtgcggct gaccgggttc ggcatcgcct cgcgcatcgt gcgcgagcgc
     3301 cagtcgcctc accctcccga aatgatcgcc ggcacgttgg cctacatggc ccccgagcag
     3361 accggacgga tgaatcggtc cgtcgattca cgcagcgatc tttacgcgct tggtgtcacc
     3421 ttctaccaaa tgctcaccgg tgctttaccg tttatcgcca cggagccgat ggaatgggtg
     3481 cactgccatc tcgccaggtg gccggt
//
LOCUS       DATCWM010000082         2164 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_254399, whole genome shotgun sequence.
ACCESSION   DATCWM010000082 DATCWM010000000
VERSION     DATCWM010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2164
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_254399"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            163..786
                     /locus_tag="VIQ50_01530"
     CDS             163..786
                     /locus_tag="VIQ50_01530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY9359086.1"
                     /translation="MRSDFAGLVPDIAAAGRAPKAQHNDSSDAALIAKVATGNRLAMQ
                     VLFARHHARVYRFIFRLLGSEAAAEDLTSEVFLGVWRHAHRFEARSSVTTWLLAIARY
                     KALAELRRRPELACDEAAAQTSDPADDPEATFAIKHRGEIVRDCLGRLSRRHREVIDL
                     VYYHGKSVQEAAAILGIPGNTVKTRMFHARKNLSELLAARGVMGALA"
     gene            complement(811..1545)
                     /locus_tag="VIQ50_01535"
     CDS             complement(811..1545)
                     /locus_tag="VIQ50_01535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEY9359087.1"
                     /translation="MPSPSAKSQGERTRDKLSLLRSHPLFRDLPPGVIEHLGSYMKTR
                     RVARGTTIFAKGDPGSGLMGVLAGAVKVSVASADGKDIVLNVFREGDIFGEIALLDGR
                     PRTADATAMSDCELIVIERRDFVPFLSSQPDVMLKFIEILCSRLRRTSEQVQDITFLN
                     LPTRLAKTLLQLTGGVQGSATPTKAAITQREISQMIGMSRESTNKQLRAWAKRGWIRL
                     ERGGVGVIAPDKLTAIAAEGADFDPS"
     gene            1877..>2164
                     /locus_tag="VIQ50_01540"
     CDS             1877..>2164
                     /locus_tag="VIQ50_01540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEY9359088.1"
                     /translation="MQMQQIRYFLALCEERNFTRAAGRCGVTQPSLTNAIIALERELG
                     GALFQRRPAIALTVLGHAVQPYLQCVAENADRAWNAAQAMVGVRPANRVPAA"
BASE COUNT          379 a          708 c          700 g          377 t
ORIGIN      
        1 gagccgccga tgatgatggc gcgcgggcgg cggcgtttgc tcggcatttt ggcgcccgtc
       61 gccctcggca ttggatgacg tttggtctct gtgaagtagt taacaaaagg tttccgccgg
      121 gcagtctagg catattggta ggccaaaaca ggggagctac caatgcgcag cgactttgcc
      181 gggcttgtcc ccgatatcgc agccgccggg cgggcgccga aagcgcagca taacgacagt
      241 tcggatgcgg cgctgatcgc caaggtcgca accggcaaca ggctcgccat gcaggtcctg
      301 ttcgcccgcc atcatgcgcg cgtgtaccgc ttcatatttc ggcttctcgg cagcgaggcg
      361 gcggcggagg acttaaccag cgaggtcttc ctaggcgtgt ggcggcacgc gcaccgcttc
      421 gaggcgcgct cctcggtcac gacctggctg ctggcaatcg cgcgctacaa ggcgctcgcg
      481 gagctgcggc gccggccgga gctcgcctgc gacgaagcgg ccgcgcaaac aagcgatccg
      541 gccgacgatc cggaggcgac cttcgcgatc aagcaccgcg gagaaattgt gcgcgactgc
      601 ctgggccgcc tgtcgcgccg gcatcgcgag gtcatcgatc tcgtctacta tcacggaaaa
      661 tcggtgcagg aggccgccgc gattctcggc attccgggca atacggtcaa aacccgcatg
      721 tttcacgccc gcaagaatct ctccgagctg ctcgccgcgc gtggcgtcat gggcgcgctg
      781 gcgtagctca aacccgggga tcgctccgct tcacgacgga tcgaagtccg cgccctctgc
      841 cgcgatggcg gtgagcttgt ccggcgcgat cacgccgacg ccgccgcgct cgagccgaat
      901 ccagccgcgc ttggcccatg cccgcagctg cttgttggtg ctctcgcgcg acatgccgat
      961 catctggctg atctcgcgtt gggtgatggc cgccttggtc ggcgtcgccg agccctgcac
     1021 gcccccagtc agctgcagca atgtcttcgc caagcgcgtc ggcaggttca ggaacgtgat
     1081 gtcctgcacc tgctcgctgg tgcggcgcag ccgcgagcag agaatttcga tgaacttgag
     1141 catcacgtcc ggctgactgc tcaggaaggg aacgaaatcg cgccgctcga tgacgatgag
     1201 ctcgcagtcg gacatggcgg tcgcatccgc ggtgcgcggg cggccgtcga gcaaggcgat
     1261 ttccccaaaa atatcgccct cgcgaaagac gttgagcacg atgtccttgc cgtcggcgga
     1321 ggcgacgctg actttcaccg cgccggcgag cacccccatg agcccgcttc ccggatcgcc
     1381 cttcgcgaag atggtggtcc cgcgcgccac ccggcgcgtc ttcatgtagg agccgaggtg
     1441 ctcgatcacc cccggcggaa gatcgcgaaa cagcggatgg ctgcggagca gggataactt
     1501 gtcacgcgta cgttccccct gcgacttagc gcttggactc ggcatgaggg ctcccctccc
     1561 cgttgcaaac gagtcttgca gtcgacgtgt gcgctcgagc acgcttggcg agcgtttcgt
     1621 cgcagtacca gtatagccga ttccagtata gccgattcca tcgtcgatgc ggcgccgccg
     1681 gcttttcccg cgcgaaaggc cgcatactct cgaaaagaag cgaaggtcac aaatgcacgc
     1741 ttagagtgca tctgccctcc gccccctagc ttggggtcga caaggaaaat gcgccttatg
     1801 tgaagggcct caccctccaa acccgacgcc gatggcagtc tcgcacgcga gccaaatcga
     1861 gacggcgagg tgtgacatgc agatgcagca gatccgttac ttcctggcgc tctgtgagga
     1921 gcgcaatttc acgcgagcgg ccggacgctg cggcgtcacg cagccctcgc tgaccaacgc
     1981 catcatcgcg ctcgagcggg agctcggcgg cgcactgttt caacgcaggc cggcgatcgc
     2041 gctcaccgtg ctcggccacg cggtgcaacc atacctgcaa tgcgttgcgg aaaacgccga
     2101 tcgagcgtgg aatgcggcgc aggcgatggt cggtgtgcgg ccggcaaatc gcgtgccggc
     2161 ggcg
//
LOCUS       DATCWM010000083         2721 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_535060, whole genome shotgun sequence.
ACCESSION   DATCWM010000083 DATCWM010000000
VERSION     DATCWM010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2721
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_535060"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..753)
                     /locus_tag="VIQ50_01545"
     CDS             complement(106..753)
                     /locus_tag="VIQ50_01545"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HEY9359089.1"
                     /translation="MSTIITVATMKGGSGKSTLASCLAVHWQLAGRRPTLIDADPQRS
                     IARLAARERALGGVPVVEDATEHASEVARRLVVGGGPVIIDTPGFRSETTTKCLTASD
                     FVLVPVKASPFDVDRMLDTLNMLVNAANDWHPIYRCVLTQTTRDSVVAKHIRSELGAA
                     GFRLLESEMTNRVIYAEAALWGATPSLIESTGPAARDIAAIAGEVDNILAIKQAA"
     gene            complement(900..1955)
                     /gene="cobD"
                     /locus_tag="VIQ50_01550"
     CDS             complement(900..1955)
                     /gene="cobD"
                     /locus_tag="VIQ50_01550"
                     /EC_number="4.1.1.81"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013531122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0048472 - threonine-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine-phosphate decarboxylase CobD"
                     /protein_id="HEY9359090.1"
                     /translation="MSSINTATMVSVTAMTSDSGVRLEHGGDLATARRLFPGAPQPFI
                     DLSTGINPHPYPLPPLGANVFAQLPDSAAQIRLSAIAAQTYGAPSAAHVVCAPGTQAL
                     LPLVAGLVPAGRAVILGPTYSEHARAAAHAGHAVLDARDIEELRGADLAVVVNPNNPD
                     GRIIGKEELLALSDELNVRGGLLLVDEAFMDVGPAEASLAGEIDRGNIVLLRSFGKFF
                     GLAGLRLGFALAAPDLATKLNAKLGPWAVSSPAIAIAEQALADTVWIDATRIRLASAA
                     KKLDQLLASADVEVIGGTSLFRLVRSPQAKAIFQHLGAGGIIVRHFHEHPTWLRFGIP
                     GEPYWDRLGLALAPRPT"
     gene            1912..>2721
                     /gene="cbiB"
                     /locus_tag="VIQ50_01555"
     CDS             1912..>2721
                     /gene="cbiB"
                     /locus_tag="VIQ50_01555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019858755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016880 - acid-ammonia (or amide) ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobinamide-phosphate synthase CbiB"
                     /protein_id="HEY9359091.1"
                     /translation="MAVTLTIVAVLIELIAGYPDWLLRSIGHPVTWMGRLIAALERRW
                     NRETDAPALRRMFGVLAVVILLGVVAVPTLVIQSGLLILPFGLIGAAILGSTLIAQRS
                     LHQHVERVADALESDGLRGGREAVSHLVGRDTETLDEAGIARAAIESLAENFSDGVVA
                     PVFWMIIAGLPGAAIYKAISTADSMIGHRSPRYQAFGWAAARLDDLLNLPASRLSALL
                     IIAAAAVKKGHSAPAAWRALCRDAPHHLSPNAGYPEAAMAGALGLALGGPRA"
BASE COUNT          495 a          849 c          843 g          534 t
ORIGIN      
        1 tacctgctgg agccgctcgc cagtcgttgc cgttcccggc cgcgacctcg ggcgtgccgt
       61 caatcgtggg tctgattacg tttgggagct tttttttgct cacgttcatg ccgcctgctt
      121 gatcgcaaga atattgtcga cttcgccagc gatcgccgcg atgtcacggg cagccggccc
      181 agtactctcg atgagactcg gtgtcgcgcc ccagagcgca gcctcggcat agatgacgcg
      241 gttggtcatc tcgctttcga gcagccggaa cccggctgcg ccaagttcag agcgaatatg
      301 cttggcaacg acggagtccc gagttgtttg ggtaagtacg caccggtaga tcggatgcca
      361 gtcattcgca gcattgacga gcatgttcag cgtatccagc atgcggtcaa catcgaatgg
      421 ggaggccttg accgggacaa ggacaaaatc gcttgccgtg agacatttcg tcgtcgtttc
      481 ggagcgaaag ccgggcgtgt cgatgatgac ggggccgcca ccgaccacga gccggcgggc
      541 cacttcgctg gcgtgttcag tcgcatcctc gaccacgggg acaccgccga gtgcccgttc
      601 acgtgcggcg agccgcgcaa tcgaccgctg cggatcggca tcgatcagcg tgggacggcg
      661 tccagcaagc tgccaatgca ccgccaaaca gcttgcaagc gtactcttgc cgctgccgcc
      721 tttcatggtg gccactgtga tgatcgtgct catcgcctat cgtctccagc cctaaaagcg
      781 acgaatcatc cgaatcaagg ttatcgtctt cttgcgcaac tgcctactct gggcagtggg
      841 cgtttgactg gggacgcccg tcatgaatcg ggccaattcg ccttcatcgg gtaccacgtt
      901 caggtaggcc gcggcgctag ggccaggccg aggcggtccc agtacggttc gcccggaatc
      961 ccaaatcgca gccatgtcgg atgttcatgg aagtggcgca ctattattcc gccggcacca
     1021 agatgctgaa atatcgcctt tgcctggggg ctccgaacca ggcggaacaa ggacgtgccg
     1081 ccgatgacct cgacatcggc acttgccaag agctgatcga gcttcttcgc agcgcttgcc
     1141 agtcggatgc gcgtggcgtc gatccacaca gtatccgcga gtgcctgctc ggcgatcgca
     1201 atcgcaggac tagacaccgc ccacgggccc aacttcgcat tgagctttgt tgcaaggtcc
     1261 ggcgcggcga gcgcgaagcc tagcctcagt cctgccagtc cgaaaaactt tccaaaggag
     1321 cgaagcagga caatatttcc acggtcgatt tcgcccgcca aacttgcttc tgcaggtcca
     1381 acatccatga aagcttcgtc aaccagcaga aggccgcccc ggacattaag ctcgtctgat
     1441 aatgcgagca gctcttcttt gccgatgatc cggccatcgg ggttgttcgg gttgacgaca
     1501 accgcgagat cggcgccccg caactcctcg atatccctgg catccaatac ggcatgtccc
     1561 gcatgcgcgg cggcgcgcgc atgctccgaa tacgtcggcc cgagaatgac tgcgcgacct
     1621 gcaggcacga gccccgccac gagcggcagc aaggcctggg tccccggcgc gcacaccaca
     1681 tgggcggccg atggagcgcc gtaggtttgc gccgcaatcg cggaaaggcg aatttgcgcg
     1741 gcagaatccg gtagttgcgc gaatacattc gcgcccagcg gcggcagagg gtaaggatga
     1801 gggttgattc ccgtcgacaa gtcgatgaac ggttgtggcg ccccggggaa cagtcgtcgg
     1861 gccgtggcga ggtcgccacc atgctcgagc cgcacgccgg aatcggaggt catggctgtc
     1921 acgctgacca ttgttgccgt gttgatcgag ctcattgccg ggtacccaga ttggctgctg
     1981 cgatcaatcg gtcatcccgt gacctggatg ggtcgattga tcgcggcgct ggaacgccga
     2041 tggaaccgcg aaacggacgc tccggcgctc agacgaatgt tcggagtctt ggccgtcgtc
     2101 attctccttg gcgtcgtggc cgtgccgacg ctcgttattc aaagcggact tctcattctg
     2161 ccattcgggc tgatcggcgc cgccatcctc ggcagcacgt tgatcgccca gcgaagcctg
     2221 catcaacatg tggaacgtgt tgccgatgcg ctcgaaagcg atggtcttcg cggcggccgg
     2281 gaagcggtat cgcatctcgt cggccgcgat accgagacac tcgacgaggc aggcatcgcc
     2341 cgtgccgcaa tcgaaagctt ggcagagaat ttttccgatg gcgtggtcgc gcctgtcttc
     2401 tggatgatca tcgcgggcct tcctggcgcg gcaatttaca aggcgatcag cacagctgac
     2461 agtatgatcg ggcatcggag tccgcgttac caggccttcg gctgggccgc tgcacgcctc
     2521 gacgatttgc tcaacctgcc ggcatcgcgc ctttcggctt tgctgatcat cgctgcggct
     2581 gccgtgaaga aagggcattc ggcgccggcg gcttggcgcg cgttgtgccg tgacgcgccc
     2641 catcacctct cgccgaacgc cggctatcct gaagcggcta tggcaggcgc gcttggtctc
     2701 gcgctcgggg gcccccgcgc g
//
LOCUS       DATCWM010000084         2787 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_362355, whole genome shotgun sequence.
ACCESSION   DATCWM010000084 DATCWM010000000
VERSION     DATCWM010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2787)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2787)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2787
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_362355"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..515
                     /locus_tag="VIQ50_01560"
     CDS             <1..515
                     /locus_tag="VIQ50_01560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="peptidoglycan recognition family protein"
                     /protein_id="HEY9359092.1"
                     /translation="PLGLPADAVKWRNIIVHQTEGPAGSAKSMALAQAKNPTKRGVTV
                     WVETDGTVYWSTAENVIPTHGDGANRNDNKYIDNSKTYRSVIKTNSIGVEFVGNYPDV
                     AKPATREQRQAWLILVRFLQERYDIPAENIYAHNWIDFKDRRYCEGCELATLARKLGY
                     APGRRASSSE"
     gene            600..1310
                     /gene="queC"
                     /locus_tag="VIQ50_01565"
     CDS             600..1310
                     /gene="queC"
                     /locus_tag="VIQ50_01565"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HEY9359093.1"
                     /translation="MSSVDPEAALVLFSGGQDSTVCLAWALERFARVETLGFDYEQRH
                     RAELEARQRVREHITALEPAWSERLGEDHVLHLGALAAISDTALTREVAIEVGASGLP
                     TTFVPGRNLVFLAFAGALAYRRGVKHLVAGMCETDFSGYPDCRDDTIKSMQLALNLGM
                     DRRFVIHTPLMWIDKAATFALAHEIGGDALVDVLVEDTHTCYLGDRSRRNDWGYGCGT
                     CPACQLRAEGFAKWMSMR"
     gene            1313..1873
                     /locus_tag="VIQ50_01570"
     CDS             1313..1873
                     /locus_tag="VIQ50_01570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:1990397 - queuosine salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VUT family protein"
                     /protein_id="HEY9359094.1"
                     /translation="MIETRRRYEGMLFLALFALTIPAANWLIGHLGTVCQPAGVCLIP
                     VAPGLMAPSGVIMAGAALVLRDLVQRRLGVAASSLAILVGAVLSALLAPPSLVIASAA
                     AFLLSEFADLAVYTPLARRGLITAVVASSAMGLVVDSVVFLWLAFGSLEFLLGQIVGK
                     AWMVLLSIPCVGWLRRRDARLGMASV"
     gene            1903..2604
                     /locus_tag="VIQ50_01575"
     CDS             1903..2604
                     /locus_tag="VIQ50_01575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease activity regulator RraA"
                     /protein_id="HEY9359095.1"
                     /translation="MHMSAALYDTLRTITTATITTILLKKGIRRCWMNGPRPLVSGGA
                     RIVGSAFTLRFVPVREDLATPESWAKPISTRGAIEEMPADCIAVADAMGVTSAGIFGD
                     ILTLRMLKRNVAALVTDGVVRDKEGVLASKLPVWCAGTAAPASVNGLTFVGWQEPIAC
                     GGCAIFPGDVIVCDDDGAVVIPKDLLAFVAEEGAEHERMESFIVAEVERGAKLPGLYP
                     MNEETKARYAAWKKT"
BASE COUNT          459 a          876 c          909 g          543 t
ORIGIN      
        1 atccgctcgg gttgccggcc gatgcggtca agtggcgcaa catcatcgtg caccagaccg
       61 aagggccggc cggctcggcg aagagcatgg cgctggcaca ggcgaaaaat ccaaccaagc
      121 gcggcgttac cgtgtgggtc gagaccgacg gcacggtcta ctggtcgacc gccgagaatg
      181 tgatcccgac gcatggcgac ggcgccaatc gaaacgacaa caaatacatc gacaattcca
      241 aaacctatcg cagcgtgatc aagaccaact cgatcggggt ggagttcgtc ggcaactatc
      301 ccgacgtcgc caagccggca acgcgcgagc agaggcaagc ttggctgata ttggtgcgct
      361 tcttgcagga gcgctacgac attccggccg agaacatcta tgcccacaat tggatcgact
      421 tcaaagatcg ccgctattgc gaggggtgcg agctggcgac gcttgcgcgc aagctcggct
      481 acgcgcccgg gaggcgagcg agcagcagcg agtagcaaac agcgatcggc gaacagcgcg
      541 tggcgagtta gaggaatcat gtggtgtccg ccattcgctg gtcacacgtg tgatgaatcg
      601 tgagctcagt ggatcccgag gccgcgctcg tcctgttttc cggcgggcaa gattcaaccg
      661 tgtgcttggc gtgggcactc gagcgtttcg ctcgcgtcga aacgctgggc ttcgactacg
      721 agcaacgcca tcgcgccgaa ctcgaggcgc ggcaacgcgt gcgtgaacac atcacggcgc
      781 tcgagccggc gtggagcgaa agactcggcg aggatcacgt gcttcacctt ggggcgctgg
      841 cggctatttc cgataccgcg ctcacgcgcg aggtcgccat cgaggtcggg gcgagcgggt
      901 tgccgacgac gttcgttccc gggcgcaatc tcgttttcct cgcctttgcc ggcgcgctcg
      961 catatcggcg cggcgtgaaa catctcgtcg ccggcatgtg cgagaccgac ttctccggtt
     1021 atcccgattg tcgcgacgac acgataaaaa gcatgcagct cgcgctcaac ctcgggatgg
     1081 atcgccggtt cgtgatccat acgccgttga tgtggatcga caaggcagcg accttcgcgc
     1141 tggcgcacga gatcggcggg gatgcgttgg ttgacgtgct ggtcgaggac acccacacct
     1201 gctatctcgg cgaccgctcg cggcgcaacg attggggcta cggctgcggg acctgtccgg
     1261 cctgccaatt gcgcgccgag ggcttcgcca agtggatgtc gatgcgatga ccatgatcga
     1321 gacgagacgc cggtacgagg gcatgctgtt cctcgcgtta ttcgcgctca ccattccggc
     1381 ggccaactgg ttgatcgggc acctcggcac ggtgtgccag ccggcgggcg tctgcctcat
     1441 tccggtcgcg ccgggactga tggcgccctc gggcgtgatc atggccggtg cggcgctcgt
     1501 gttgcgcgac ctggtgcagc gccggctcgg cgtggcggca tcctcgcttg ccattctcgt
     1561 tggtgccgtc ctttcggcgc tgctcgcgcc gccttcgctc gtcatcgcgt cggccgccgc
     1621 attcttgctc tcggaattcg cggatctcgc ggtctatacc ccgcttgctc ggcgcgggct
     1681 gatcactgcc gtggtggcct cgagcgcaat gggtctcgtc gtcgactcgg tcgtgtttct
     1741 gtggctcgcc ttcggctcgc tcgaattcct gctcggccag atcgtcggca aggcgtggat
     1801 ggtgctgctc tcgatcccgt gcgtgggctg gttgcgccgg cgcgacgcgc ggctcggcat
     1861 ggcgtcggtt tgaagtcgcc cactgaggtc ttcgcaagag gtatgcacat gagtgcggcc
     1921 ctttacgaca ccctgcggac gatcaccacc gcgaccatca ccaccatatt attgaagaag
     1981 ggcatccgtc gctgctggat gaacgggccg cggccgctcg tctccggcgg cgcacgcatc
     2041 gtgggttctg ctttcacgct gcgcttcgtg ccggtgcgcg aggatctcgc gacgccggaa
     2101 agctgggcca agccgatttc cactcggggc gccatcgaag aaatgccggc agattgcatt
     2161 gcggtcgccg acgcgatggg cgtcacgtcg gccggcatct tcggcgatat cctcaccctg
     2221 cgcatgctga agcgcaatgt cgcggcgctc gtgaccgatg gcgtcgtgcg cgacaaggag
     2281 ggcgtgcttg cctctaagct gccggtatgg tgcgccggca ccgccgcgcc ggcctcggtc
     2341 aatggcctca ccttcgtcgg atggcaggag ccgatcgcct gcggcggctg cgcgattttt
     2401 cccggcgatg tcattgtctg cgacgacgat ggagccgtgg tgatcccgaa ggaccttctc
     2461 gccttcgtcg ccgaggaggg cgccgagcac gagcgcatgg agagctttat cgtcgccgag
     2521 gtcgagcgtg gggccaaact tcccggtctt tatcccatga acgaagaaac caaggcccgc
     2581 tacgccgctt ggaagaagac gtgacgagcg ggcacgcatc gagcgcggcg ttcgtccgtc
     2641 agcgcccaag aatgtgttcc tttcctgcgg acgcgatctg acacgcccgc cgacgcgccg
     2701 atgtttttcc ctctttccaa aattctcggc ttcttcgcca tcccgtccaa ccttgtcata
     2761 tcgattggtg taatcgggct cttgctg
//
LOCUS       DATCWM010000085         2465 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_389277, whole genome shotgun sequence.
ACCESSION   DATCWM010000085 DATCWM010000000
VERSION     DATCWM010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2465)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2465)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2465
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_389277"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1817)
                     /gene="asnB"
                     /locus_tag="VIQ50_01580"
     CDS             complement(<1..1817)
                     /gene="asnB"
                     /locus_tag="VIQ50_01580"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HEY9359096.1"
                     /translation="MCGIAGMIDWRAATPADALRTIGEAMIESVRHRGPDAGDVWVEA
                     EGGVALGQRRLAIIDLSPGGAQPMHSADRRYVITFNGEIYNFRDIRRELQAAGRSMRS
                     ESDTEVLLEACALWGVEAAIDRTVGMFAFALWDRKTRSLVLARDRLGIKPLYYAATPE
                     RVIFASQLKAFRATPGWTPSIDDDAVVGYLRHAYIAQPRTIYREARKLPPGHILTLRE
                     GVAPAPKCFWDLRGIAIAGQRRNDPAPNTDEAIERLDALLRDAVGLRMIADVPLGAFL
                     SGGIDSSTVVALMQAQSSRPVKTFSIGFHESGYDEAQCAKQVAAHLGTDHTEFYVEPR
                     HALDVIPRLADWFDEPFADPSQIPTYLVSELTRKHVTVALSGDGGDELFAGYNRYLWA
                     ERLAGAVSLVPHPLRGASAALLRALAPQTWNRLFAFVPASWRPALPGDKLHKITTLLD
                     NPEPDAIYRRLVSQWERPDQVAIAGVEPRGPLWDTTIAKDFPEFVARMQFLDMVSYLP
                     DDILTKVDRATMAVGLEGRVPLLDHRVVAYSWSLPLAFKVRGGRGKWLLRRVLDRYVP
                     RSLVERPKMGFGVPIDAWLRGPLREWAESLLAPARLASDG"
     gene            complement(1972..>2465)
                     /locus_tag="VIQ50_01585"
     CDS             complement(1972..>2465)
                     /locus_tag="VIQ50_01585"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEY9359097.1"
                     /translation="PADLVRDGSVLQLLAPNSSLDFVYAIEVFRYLDTRDNAQGHSEI
                     VRVLRPGGIYFGTYVNKWALDGFRQLSQFRKLAERLSGTPRRYHVEFETPSSLHEKLR
                     AAGFSRITTHGAMFAPLRVLHKISPRVGAAVSRITMPHEARLSDYGPFRAFAAHLIIV
                     ARR"
BASE COUNT          464 a          793 c          786 g          422 t
ORIGIN      
        1 ccatcagaag caagccgcgc cggcgcgagc agcgattccg cccattcccg cagcggacct
       61 cgcagccatg catcgatcgg cacgccaaag cccatcttcg gccgctcgac cagcgacctc
      121 ggcacatagc gatcgagcac ccggcgcagc agccatttgc cgcggccgcc gcgcaccttg
      181 aacgcgagcg gtaagctcca ggagtaagcc accacgcgat gatccaggag cggcacgcgc
      241 ccctcgaggc ccactgccat cgttgcccgg tcgaccttgg tcagaatgtc gtcgggaagg
      301 tagctgacca tgtcgaggaa ttgcatgcgc gcaacgaact cggggaagtc cttcgcgatc
      361 gtcgtgtccc acaatggtcc gcgcggctcc acaccggcga tggcgacctg atcgggccgc
      421 tcccattggc tcacgagccg gcggtagatc gcatcgggct cgggattgtc gaggagcgtg
      481 gtaatcttgt gcagcttgtc gccggggagc gccggccgcc atgacgcagg cacgaaggca
      541 aacaatcgat tccaggtctg tggcgcgagc gcgcgcaaca acgcggccga agcgccgcgc
      601 aacggatgcg gcacgaggct caccgcgccg gcgagccgct ccgcccacag gtagcggtta
      661 tagccagcga aaagctcgtc cccgccgtcc cccgacaatg cgacggtcac gtgcttgcgg
      721 gtcaattccg acacgagata ggtcgggatc tgggatggat cggcaaatgg ctcgtcgaac
      781 cagtcggcaa ggcgcgggat gacgtcgagc gcgtgtcgcg gctcgacata gaactcggtg
      841 tggtcggtgc cgagatgggc ggcaacctgc tttgcacatt gtgcttcgtc gtaaccgctc
      901 tcgtggaagc cgatggagaa cgtcttgacc gggcgcgaac tctgcgcctg catcagtgcg
      961 accacggttg aggagtcgat cccgccagac aggaatgcgc caagcggcac gtctgcaatc
     1021 attcgcagac caacagcatc gcgcagtagc gcatccaacc gctcgatggc ctcgtccgtg
     1081 tttggcgccg ggtcgttgcg ccgctgcccg gcgatcgcaa tgccgcgcag atcccagaaa
     1141 catttcggcg ccggcgcgac gccttcgcgc agcgtcagga tatggccggg cgggagtttt
     1201 cgcgcttcac gatagatcgt gcgcggctgg gcgatgtagg cgtgacgtag gtaaccaacg
     1261 acagcatcgt cgtcgatgct tggcgtccag cccggagtgg cgcggaatgc cttgagttgc
     1321 gaagcgaaga tcacccgctc cggcgtcgcc gcgtaataga gcggcttgat gccgaggcgg
     1381 tcgcgcgcca acaccaggct gcgggtcttg cgatcccaca gcgcgaacgc aaacatgccc
     1441 actgtgcggt cgatcgcggc ttccactccc cacaatgcgc aggcttcgag cagaacctcg
     1501 gtatcggact cgctgcgcat cgagcggccg gcggcctgca gctcgcgacg gatatcgcgg
     1561 aaattgtaaa tctcgccatt gaaggttatg acgtagcgcc gatcggccga atgcatcggc
     1621 tgggccccgc cggggctgag atcgataatg gcgagccggc gctgacccag cgccacgccg
     1681 ccttcggctt cgacccaaac atctcccgca tccggcccgc gatgccgcac gctctcgatc
     1741 atcgcttcgc cgatcgtacg cagcgcatcg gccggcgtgg ccgcgcgcca atcgatcatg
     1801 ccggcaatgc cgcacatcgc gcttcctcga agaatgatgg tcgttcgagc ttgtaggtat
     1861 ctcgctttcc gctcatgccc tcacgggttg cttgatcgag gagagctgcc tctcctcgaa
     1921 ggtgtggcat gcggccgtcg cgttcgatca tacccttcat ccccctaatt tctaacggcg
     1981 cgcgactatg atcaagtgag ccgcgaacgc ccgaaatggt ccgtagtcgg aaagccgcgc
     2041 ctcgtgcggc atggtgatcc tcgagacggc ggcgccgacg cgcggagaaa tcttgtgaag
     2101 gacacgcagc ggcgcgaaca tggcgccatg cgtggtgatc cgcgaaaatc ctgccgccct
     2161 caacttctcg tgcagggagg atggcgtttc gaattcgacg tggtagcgcc gcggagttcc
     2221 actcaagcgc tccgcgagtt tgcgaaactg cgaaagctgc cggaagccgt ccagagccca
     2281 cttgttgacg taggtgccga agtaaatccc gcccggcctt agaacgcgga cgatctcgct
     2341 gtggccttgc gcattgtcgc gcgtgtcgag gtatctaaaa acctcgatgg cgtagacgaa
     2401 atccagtgat gagttgggtg ccagcagttg cagcaccgag ccgtcgcgaa caaggtcggc
     2461 gggta
//
LOCUS       DATCWM010000086         2811 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_205827, whole genome shotgun sequence.
ACCESSION   DATCWM010000086 DATCWM010000000
VERSION     DATCWM010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2811)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2811)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2811
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205827"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..802
                     /locus_tag="VIQ50_01590"
     CDS             <1..802
                     /locus_tag="VIQ50_01590"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013215077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004604 - phosphoadenylyl-sulfate
                     reductase (thioredoxin) activity [Evidence IEA];
                     GO_process: GO:0019379 - sulfate assimilation,
                     phosphoadenylyl sulfate reduction by
                     phosphoadenylyl-sulfate reductase (thioredoxin) [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoadenylyl-sulfate reductase"
                     /protein_id="HEY9359098.1"
                     /translation="AALTRLRHAYQPGLRNPQPLRWNASKNEADELNLRLVRVKNLPD
                     RIREMRRRIEGRIAFSTNLGLEDQAILHAIAESGADIDVFTLDTGRLFPEVLETVEIS
                     EIRYGIRIRLVAPEASEVEALVSRDGVFGFKNSVANRKACCEVRKVRPLTRELKGAQG
                     WITGIRREHSDERAAAPLAAWDEERALMKVNPVVDWSTQDLTAYIAANNIPVNPLHAR
                     GFISIGCAPCTRAVQPGENPRAGRWWWEHEEKKECGLHMNPNREGKAA"
     gene            799..1704
                     /gene="cysD"
                     /locus_tag="VIQ50_01595"
     CDS             799..1704
                     /gene="cysD"
                     /locus_tag="VIQ50_01595"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010914955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004781 - sulfate adenylyltransferase
                     (ATP) activity [Evidence IEA];
                     GO_process: GO:0019419 - sulfate reduction [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HEY9359099.1"
                     /translation="MTALTSHLKLLEAESIHIFREAAAQFRAPVLLYSIGKDSTVLLH
                     LARKAFWPAKPPFPLLHVDTTWKFPEMIAFRDKTARDFGLDLIVHTNHDGLARNINPF
                     DHPPSVYTDVMKTVALRQALDTGGFDAAFGGARRDEEGSRAKERVFSFRSAGHRWEPR
                     CQRPEMWQLLNGRLGKGETVRVFPLSNWTEGDVWRYIQLEKLDVVPLYFAAERPVVSR
                     NGQLLVVADERMRFEPGKRPVLRKVRFRTLGCWPLTAAIESDADDIESVVEETLAARV
                     SERAGRLIDHDTAGAMEMKKREGYF"
     gene            1704..>2811
                     /locus_tag="VIQ50_01600"
     CDS             1704..>2811
                     /locus_tag="VIQ50_01600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015598204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEY9359100.1"
                     /translation="MHVAALRDEVSVGPRTVRATQAGALVKLLTCGSVDDGKSTLIGR
                     LLWDAAGVTDDQRAAVALASQNRAVNGEKIDFSLLLDGLQAEREQGITIDIAWRYFET
                     PGRRFIIIDSPGHEQYTRNMATGASHADIAILLVDARHGAKRQTRRHAAICDLVGIKK
                     VVLAVNKMDAVGWSEARYRDIERDFLAMAGSFNFAQVMTFPVAALTGDNVVYRSTAMP
                     WYAGPTLLDYLEAVDPVAELVDAPFRLPVQLVLRAAGDFRGYAGTVTSGRIKVGDRIV
                     DARSSLGATLRRIASMDGDMPVASKGDAVTLVLDTDLDISRGAVLSETARRPVNADVI
                     EARLVWLSETPFDPEAGYLLRTATDLTPVTSMSVS"
BASE COUNT          482 a          929 c          887 g          513 t
ORIGIN      
        1 ggcggcgctc acgcggctgc gtcatgccta tcagcccggc ttgcgtaacc ctcagccgct
       61 ccgctggaat gcctccaaga atgaagccga tgaactcaac ctccgtctcg tgagagtgaa
      121 gaacctgccc gaccgcatcc gggagatgcg ccggagaatc gagggacgca tcgccttctc
      181 caccaatctc ggcctcgagg accaggcgat cctgcacgcc atcgccgaat ccggcgccga
      241 catcgacgtg ttcacgctcg atactgggcg tctctttccc gaggtgctcg agaccgtcga
      301 gatttccgaa atccgctacg gcatccgcat ccgcctggtc gcgcctgagg cgagcgaagt
      361 cgaggctctc gtctcacgcg atggtgtgtt cggcttcaag aattcggtcg cgaaccgcaa
      421 ggcctgctgt gaggtgcgca aagtgcggcc tctgacccgc gagcttaagg gcgcgcaagg
      481 ctggatcacc ggcatccggc gcgagcattc cgacgagagg gcagccgcgc ctctcgccgc
      541 ctgggacgag gaacgcgcgc tcatgaaggt caatcccgtc gtcgactggt ccacgcagga
      601 tctcaccgcc tacatcgccg ccaacaacat ccccgtcaat ccactgcatg ctcgcggctt
      661 catctcaatc ggatgcgcgc cgtgcacgcg cgccgtgcag ccgggcgaga acccgcgcgc
      721 cgggcgctgg tggtgggaac acgaggaaaa gaaggagtgt ggcttgcaca tgaacccgaa
      781 ccgggaaggc aaggccgcat gaccgcgctt acctcccatc tcaagctgct ggaagcggag
      841 agcatccaca tcttccgtga ggccgcagcg cagttccgcg cgccggtgct gctttactcc
      901 atcgggaagg actcgacggt cctgctgcat cttgcgcgca aggccttctg gccggccaag
      961 ccacctttcc cgcttctgca cgtcgatacg acttggaagt ttccggagat gatcgcgttc
     1021 cgcgacaaga cggcgcgcga cttcggactc gatctgatcg tgcacacgaa ccacgacggc
     1081 ttggcgcgca acatcaaccc gttcgaccat ccgccttcgg tttataccga cgtgatgaag
     1141 actgttgcgc tgcgtcaggc ccttgacacc ggcggcttcg atgcggcctt cggcggggca
     1201 cgccgcgacg aggaaggctc gcgcgccaag gagcgggtgt tctcgtttcg ctccgcaggt
     1261 caccgctggg agccgcgctg ccagcgtccg gagatgtggc aactcctgaa tggccgcctc
     1321 ggcaagggcg agacggtgcg cgtctttccc ctgtcgaatt ggaccgaagg cgacgtgtgg
     1381 cgctacatcc agctggagaa gctcgacgtg gttcccctct atttcgccgc cgagcggccg
     1441 gtggtgtcgc gcaacggtca gctgctcgtc gtggccgacg agcgcatgcg cttcgagccc
     1501 ggcaagcggc cggtgctccg caaggtgcgg ttccgcacgc tgggctgctg gccgctgacc
     1561 gcagcaattg aatccgacgc cgacgacatc gaatccgtcg tggaggaaac gctcgctgcg
     1621 cgggtttctg agcgggcagg gcgtctgatc gatcatgaca cggcgggcgc catggagatg
     1681 aaaaagcgcg agggctattt ctgatgcatg tggcagcgct cagggatgag gtttcggtcg
     1741 gaccgaggac ggtcagggct acgcaagccg gggcgctggt caagctgctc acctgcggct
     1801 cggtcgatga tggcaagtcg actctgattg gccgcctctt gtgggatgcc gccggcgtca
     1861 ccgacgatca gcgcgcggca gtcgcgcttg cctcgcagaa ccgtgccgtc aacggcgaga
     1921 agatcgattt cagtctgctg ctcgacggcc tccaggccga gcgcgagcag ggcatcacca
     1981 tcgacatcgc ttggcgctat ttcgagacgc ctggccggcg cttcatcatc atcgattccc
     2041 cagggcacga gcaatacacg cgcaacatgg cgaccggcgc ctcgcacgcc gacatcgcca
     2101 ttctcctggt cgatgcgcgc catggcgcca agcgtcagac ccggcgtcac gccgcgatct
     2161 gcgatctggt cggcatcaag aaggtcgtgc tcgcggtcaa caagatggat gcggtcggct
     2221 ggtccgaggc gcgctatcgc gatatcgagc gcgatttcct cgccatggcc ggaagcttca
     2281 attttgcgca agtcatgacc ttccccgttg ctgcgctcac gggagataat gtcgtttatc
     2341 gctctactgc aatgccttgg tatgcggggc cgacgctgct cgattatctc gaagccgtcg
     2401 atcccgtggc tgagcttgtc gacgcgccgt tccgccttcc ggttcagctc gtgctgcgcg
     2461 ccgccggcga cttccgcggc tatgccggca cggtcacctc cggccgcatc aaggtcggcg
     2521 accgtatcgt cgatgcccgc agcagtcttg gcgctacctt gcgccgtatc gccagtatgg
     2581 acggcgacat gccggttgca tcgaagggcg atgccgtcac gctcgtactc gacaccgacc
     2641 tcgatatttc ccgcggtgcg gttctgtccg aaaccgcacg gcgccctgtc aatgccgacg
     2701 tcatcgaggc gcggctggtg tggctctccg agacgccgtt cgatcccgag gcaggctatc
     2761 tgcttcggac cgcgaccgac ctcacgcccg tcaccagcat gagcgtctcg g
//
LOCUS       DATCWM010000087         2245 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_508171, whole genome shotgun sequence.
ACCESSION   DATCWM010000087 DATCWM010000000
VERSION     DATCWM010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2245
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_508171"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(199..747)
                     /locus_tag="VIQ50_01605"
     CDS             complement(199..747)
                     /locus_tag="VIQ50_01605"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0006168 - adenine salvage [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HEY9359101.1"
                     /translation="MTSTQLENDLQSSIRAIPDYPKPGIVFRDITTLLGNARAFRRAV
                     DELVQPWAGMKIDKVAGIEARGFILGGAVAHQVSAGFVPIRKKGKLPHKRVSIAYSLE
                     YGLDEMEMHEDAVEKGDRVIVVDDLIATGGTAEGAVKLLRQLGAQVLACCFIIDLPDL
                     GGAAKLRQLDVPVRTLISFAGH"
     gene            847..1725
                     /gene="lsrF"
                     /locus_tag="VIQ50_01610"
     CDS             847..1725
                     /gene="lsrF"
                     /locus_tag="VIQ50_01610"
                     /EC_number="2.3.1.245"
                     /inference="COORDINATES: protein motif:HMM:NF006081.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxy-5-phosphonooxypentane-2,4-dione
                     thiolase"
                     /protein_id="HEY9359102.1"
                     /translation="MPEADEEGKKYRIEQPQLAPGFYLKGSHQLDWGMKNRLARVFEP
                     TTGRTVMLAIDHGYFQGPTSGLERIDLSIIPLLPECDALFCTRGILRSVIPAQSTKPM
                     VLRASGGPSILREELSDEQIAMDMEDALRLNAAGVGIQVFIGGDFETRSIHNMTKLVD
                     AGLRYGMPVMGVTAVGKNMVRNAKYFRLACRIIAELGAHYVKTYYVEEGFETVTASCP
                     VPIVMAGGKKLPELDALTMAYNAVQQGAAGVDMGRNIFQSEAPKAMIAAVHAVVHKNL
                     KPAEGFELFKSLKSKG"
     gene            complement(1738..>2245)
                     /locus_tag="VIQ50_01615"
     CDS             complement(1738..>2245)
                     /locus_tag="VIQ50_01615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359103.1"
                     /translation="ACERAAAALAPMIDLWRDHRPELLWAATARFLDDLSQSARSHGV
                     RVLYAVRDIPQPPADCPAASARADLLVHMQREFTSRAIRLIDWSAAVAEVVGGPAHVP
                     QLHGFGIHTGAGHLNYDGHRAWAIALIDVLRRELPLDAASRDSSQAIHPAAEHAPAHA
                     LPGTPAKP"
BASE COUNT          444 a          709 c          698 g          394 t
ORIGIN      
        1 aatgagcccg ccacgtcgct tgcacaatct tctcctccct ctcctccgat agcggcagaa
       61 gctatttcgg gaactcgtta cgctccgagg cgcaagttcg atacgggaag ctggatgtag
      121 agcccgcacc gcaacagttc cttagtttgc acagcagcag cgagctatgg cttgtgttga
      181 cggcgttgca cggggccttc aatgccctgc gaacgaaatg agcgtgcgta ccggcacgtc
      241 gagctggcgc agcttggcgg cgccgccgag gtcgggcaaa tcgatgatga agcagcaggc
      301 gagcacctgc gcgccgagtt ggcgcaagag cttgaccgcg ccctccgccg tgccgccggt
      361 ggcaatgaga tcgtcgacta cgatgacgcg gtcgcccttc tccaccgcgt cctcgtgcat
      421 ctccatctcg tcgaggccgt attccagtga ataggcgatc gacacccgct tgtgcggtag
      481 cttgcccttc ttgcggatcg gcacgaaccc ggccgagacc tggtgcgcca ccgccccgcc
      541 gaggatgaag ccgcgcgcct cgatgccggc gaccttgtcg atcttcatcc ccgcccaggg
      601 ctggaccagt tcgtcgaccg cgcggcggaa ggcgcgcgcg ttgccgagca gcgtcgtgat
      661 gtcgcggaac acaatgcccg gcttgggata gtccggaatc gcacggatcg aagattggag
      721 atcgttctcg agttgcgtcg aagtcatgga ttatccgcca atgcttgtgc tatccagcct
      781 gacgccttca ctttgaccaa cagcgcaaac ttttgtcaaa gcaaaagcat cgcagcaagg
      841 tgaaacatgc ctgaggctga tgaagaaggg aaaaaatacc gaatcgagca gccgcagctt
      901 gcgcccggat tttatctgaa aggctcccac caactcgact ggggcatgaa gaaccgcctc
      961 gcgcgcgtct tcgaaccgac caccggccgg acggtgatgc tggcgatcga ccacggctac
     1021 tttcaaggcc cgacgagcgg tctcgagcgc atcgatctga gcatcatccc gttgctgccc
     1081 gagtgcgacg ccctgttctg tacgcgcgga attctgcgct cggtgattcc ggcccaatcc
     1141 acaaagccca tggtgctgcg cgcgagcggc gggccgagca ttctccggga ggaattatcc
     1201 gacgaacaga ttgccatgga catggaggat gcgcttcgcc tcaatgccgc cggcgttgga
     1261 atccaggtat tcatcggcgg cgacttcgag acgcgttcga ttcacaacat gaccaagctc
     1321 gtcgacgccg ggctgcgtta cggcatgcct gtcatgggtg tcaccgccgt cggcaagaac
     1381 atggtgcgca acgccaaata tttccgcctt gcatgccgca tcatcgccga gctcggcgcc
     1441 cattacgtca aaacttatta cgtggaggaa ggattcgaga ccgtcaccgc ctcctgcccg
     1501 gtgccgatcg tcatggccgg gggcaagaaa cttcccgagc tcgacgcgct caccatggct
     1561 tacaatgccg tgcagcaggg cgcagccggc gtcgacatgg gccgcaacat ctttcaatcc
     1621 gaggcgccga aagccatgat tgccgcggtt catgccgtcg tgcacaagaa tctcaaaccg
     1681 gccgaggggt tcgaactgtt caaatcgctc aagtcgaagg gctgaggacg gcgcgcgtca
     1741 aggtttggct ggcgtgcccg gcaaggcatg agccggcgcg tgctcggccg cgggatgaat
     1801 ggcctgcgac gaatcccgcg aagccgcatc gagaggcagt tcccgccgca ggacatcgat
     1861 caacgcgatg gcccaggcac ggtgcccgtc gtaattgagg tggccggctc ccgtgtggat
     1921 gccgaagcca tgcagttgcg ggacatgtgc cggcccaccc acgacttcgg cgactgccgc
     1981 agaccaatcg atcagacgga tcgcgcggct ggtaaactcc cgctgcatgt gcacgagcag
     2041 atcggcgcgt gcagaagctg cgggacaatc ggcgggcggc tgcgggatgt cgcggaccgc
     2101 atagaggacg cgaaccccat ggctgcgcgc gctctgcgac agatcatcca agaaccgcgc
     2161 ggtcgccgcc caaagcagtt ccggacgatg gtcgcgccaa agatcgatca tgggcgcgag
     2221 cgccgctgcg gcacgctcgc aggcg
//
LOCUS       DATCWM010000088         5625 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_378602, whole genome shotgun sequence.
ACCESSION   DATCWM010000088 DATCWM010000000
VERSION     DATCWM010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5625
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_378602"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..829)
                     /locus_tag="VIQ50_01620"
     CDS             complement(<1..829)
                     /locus_tag="VIQ50_01620"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359104.1"
                     /translation="MSVARIAVPDLVSNSYFPAIAAIELGFFAREGLDVAHELIFPNY
                     KAYEALRDGKIDFVAGPAHVAFRAFPEGEGAKLLAALAQGMYWLLVMRADLAATPGDV
                     NAVKGRTIGAAPLVDQGLKLLLIDAGLDLDRDGVRIVGVPGATEPGVSSGVAAAKALA
                     DGKLDGFWANAMGAENAVRAGVGKVILDVRRGLGPPAAFHYTLPALVTSDDVIRRDPD
                     MAAAAVRAVVKAQRALKDDVGLATKVGQALFPPPEAALIAHVVARDLPYYDPAISEAA
                     "
     gene            complement(865..1851)
                     /locus_tag="VIQ50_01625"
     CDS             complement(865..1851)
                     /locus_tag="VIQ50_01625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359105.1"
                     /translation="MHGFSNRALVCVIAAVFALPLIPQPAKALDNVTLITDFGYNGRH
                     AYFFVAIEKGYYKDADLDVKVVRGQGSVDAIRQVGANNAIVGFADAGSLVLARGNDQI
                     PAKVVAIVYAKPPQAVFCREDSGIKRPSDLEGASIANPAGGATVDMFPVYAKAAGFDA
                     SKVKWVIAGSDSLPGLLASNRVPCVGQFTVGEPLLRMQAAPAKLVRFAFADAGVSFYG
                     NGIIATDSTIASKPDLLRRFVAATIRGMKDAFARPDEAGRIMNKYHPAIDATVAEGET
                     KAVAELAQIKGRDLGRIDPARIQETIDVVNSVFKLKAPVAVNDIYAPGFVVN"
     gene            1997..2824
                     /locus_tag="VIQ50_01630"
     CDS             1997..2824
                     /locus_tag="VIQ50_01630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative hydro-lyase"
                     /protein_id="HEY9359106.1"
                     /translation="MSDAARQANDLWSESWDASDPRAARQQVRNGAYTGYTAGIAPGF
                     VQANICILPVKWAGDFLLYCQRNPRPCPLIACSDIGNPRLPTLADDLDIRTDVPRYHI
                     FRDGAFVEEVTDIRPHWRDDLVTFALGCSFSFEEALQEAGVRLKFRERNNVAAVYVTN
                     VDTVPAGPFKGPLVVTMRAFTPADAIRAVQITSRFPNVHGAPVHLGDPQSIGVDLSRR
                     YLNVGDPEVDEDELPVFWACGLTPQLAVKNATPPMCITHAPSSMLITDLRNASLAVL"
     gene            2861..4084
                     /locus_tag="VIQ50_01635"
     CDS             2861..4084
                     /locus_tag="VIQ50_01635"
                     /EC_number="4.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008838 - diaminopropionate ammonia-lyase
                     activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopropionate ammonia-lyase"
                     /protein_id="HEY9359107.1"
                     /translation="MLSSTGSRAFANPRATRNAPYAADERAAILSLAALACAKREIMA
                     WPGYKPTPVHPLPKLAARAGIEAILYKDEAERFGLGSFKALGGAYAVFKLLRKSIQEQ
                     KNVTASSLDLTSGRYADVTSRITVTCATDGNHGRSVAWGARTFGCRCVIYIPETVSAG
                     RCQAIAAYGAEIRRFAGTYDDGVRRAAADAAAEGWMVVSDTAYEGYTDVPRDVMQGYS
                     LMVEEALRQTSAPPSHVFVQGGVGGLAASVCAYLWERYGSARPFFVVVEPEKADCFYR
                     SGVAGRPTPAEGALDTIMAGLACGEVSPLAWRILATGADAFMTIDDEAAVDCMRLLAD
                     GRFGDDPVVAGESAVAGLAGLLMASTDSDARARLDLHRDSRVLVFGTEGATDPEVYRT
                     IVGRRPDEVVARRGT"
     gene            4081..5292
                     /locus_tag="VIQ50_01640"
     CDS             4081..5292
                     /locus_tag="VIQ50_01640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEY9359108.1"
                     /translation="MMNSSPTDAVCRDIDAAREELIELCGQLVAAASVNPPGRTVEVA
                     EVVRAYLSGYGIATEMVTADDEAPNIVGCVEAGAGGRHVVFNAHMDTMEAGDEVAWTV
                     PITRLSRRDGRLYGLGMGNMKGALAAMCLATAILKRHSNAWKGRLTLTAVSDEVMFGE
                     RGAVFLLRERPDVASDFLISGEGPGFMHFAVAEKGLLWLDVEARSGGGHASRALRGDT
                     AVTKLAAFLARIDAMNEMYATLPRELTGVSGGEGNLGLRLSLNAGTLAAGTVRSQVAP
                     RARAQLDIRLPPGISAQACERMIRERTDGDAISIAVVKSWDANWTALDNPLVVELATA
                     ATLVRGIAPPFVVRLPGSDARRWRELGVPAVCYGPQPTLSAGVDDYANEQDVVDCAKI
                     YARTVLALMRR"
     gene            complement(5306..>5625)
                     /locus_tag="VIQ50_01645"
     CDS             complement(5306..>5625)
                     /locus_tag="VIQ50_01645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA synthetase"
                     /protein_id="HEY9359109.1"
                     /translation="FDFWIGIDIKGPREAHEIGLTALFADPNVDLVLCTLLAPGNADF
                     PEFGELLRRLRRAYDKPVALVIYGGEAQQRWTADLEGADVPIFHTTRAGVRALSLMVD
                     ATM"
BASE COUNT         1032 a         1759 c         1791 g         1043 t
ORIGIN      
        1 ccgccgcttc cgagatggcc gggtcataat agggcagatc gcgggcgact acgtgcgcga
       61 tcagcgcggc ctcggggggt ggaaacaacg cctgccccac ttttgtggcg aggccgacgt
      121 cgtcttttaa ggcccgctgg gccttcacca cggcgcgcac cgcggccgcc gccatgtccg
      181 gatcgcgccg gatcacgtca tcgctcgtca ctagggctgg cagggtgtag tggaaagccg
      241 ccggcgggcc caatccgcgc cgcacgtcaa ggatcacttt gccaacgccc gcgcggactg
      301 cgttctcggc ccccatggca tttgcccaaa atccatcgag cttgccgtcc gcgagcgctt
      361 tcgccgccgc cactccagaa gatacgccgg gctcggttgc accgggaacg ccgactatgc
      421 gcacgccgtc gcgatcgaga tcgagccccg catcgatcaa gaggagtttc agtccctgat
      481 ccaccagcgg cgccgccccg atcgtgcggc ccttcactgc gttaacatca ccgggagttg
      541 cggcaaggtc ggctcgcatg accagaagcc agtacattcc ctgggcgagc gcagcgagca
      601 atttggcgcc ctccccttcg ggaaacgcgc gaaaggcgac gtgcgcggga cctgcgacaa
      661 aatcgatctt gccgtcgcgc agcgcctcat aggccttata attcgggaag atcagctcat
      721 gggcgacgtc gagcccttcc cgtgcgaaaa agccgagctc gattgcagca atcgccggaa
      781 aatacgaatt cgagacgaga tctggcaccg ctatgcgtgc aacgctcacg caacctcctg
      841 ccgccgtcga ggcgcacaat catgtcaatt cacgacgaat cctggcgcat agatatcgtt
      901 caccgccacc ggcgccttga gcttgaagac gctgttgacg acgtcgatcg tttcttggat
      961 gcgggcggga tcgatgcggc cgaggtcgcg gcccttgatt tgcgccagtt cggcgacggc
     1021 tttggtttcc ccttcggcta ctgtggcatc gatcgccggg tgatatttgt tcattatccg
     1081 gcccgcctcg tcgggcctgg cgaacgcgtc cttcatgcca cgaatggtgg cagcgacaaa
     1141 ccgccgtaga aggtcgggct tgctcgcgat ggtactgtcg gtcgcaatga tgccattgcc
     1201 gtagaagctc acacccgcat cggcaaacgc gaaacggacg agcttggctg gagccgcttg
     1261 catacgcaaa agaggctcac cgaccgtgaa ttgaccgaca catggcactc gattgctggc
     1321 gagcaatccc ggtagcgagt cgctgcccgc aatgacccac ttcaccttgc tcgcgtcaaa
     1381 tccggcggcc ttggcgtaga ccggaaacat gtcgaccgtc gccccgcctg ccggatttgc
     1441 aatcgaggct ccctcaagat cgctgggccg cttgatcccg gagtcctcgc ggcagaacac
     1501 cgcctgcggc ggcttggcat acacgatcgc aacgaccttg gccggaattt gatcgttccc
     1561 gcgcgccagc acaagcgagc ccgcgtcggc aaagcccacg atcgcattat ttgcgccgac
     1621 ctgccggatg gcgtcgactg atccttgacc gcggacgacc ttcacatcga gatcggcgtc
     1681 cttgtaatag cctttctcga ttgcaacgaa aaaataggcg tgacggccat tataaccgaa
     1741 gtcggtgatg agcgtgacat tgtccaacgc cttcgcgggt tgagggatca acggcagggc
     1801 gaaaactgcg gctatgacgc aaacgagcgc acgattggag aaaccatgca tgtgcaacct
     1861 ctctgcctcc cggtcgacgt gagtatacaa gcgcgggtca gatttggtat acaagaattc
     1921 ccgtcccagc cgagccatca cgggaagaca tcataagcgt gcaacaagag cgatttcgca
     1981 atcactggtc gatctcatgt cagatgcagc gcggcaagcc aatgacctct ggagcgaatc
     2041 ctgggacgcg tcggatccgc gcgcagcccg gcaacaggtt cgcaacggcg cgtataccgg
     2101 gtatacagcc ggcatcgcgc cgggtttcgt ccaggccaac atctgcattc ttccggtcaa
     2161 gtgggccggg gactttctgc tttattgtca acgcaaccca aggccttgtc cgttgatcgc
     2221 ctgctccgac atcggcaacc cccgcctgcc gacgctcgcc gacgatctcg acatccgcac
     2281 cgatgtgccg cgctatcaca tcttccgcga cggtgcattt gtcgaggaag tgaccgacat
     2341 ccgcccgcat tggcgtgatg acctggtgac attcgcgctc ggctgctctt tctcattcga
     2401 ggaggcactg caggaggcag gcgtgcggct gaaattccgc gaacgcaaca atgtcgcggc
     2461 ggtgtacgtg accaatgtgg acaccgtccc ggcagggccg ttcaagggcc cgctggtggt
     2521 gaccatgagg gccttcacac cggccgatgc catccgcgcc gtgcaaatca cgtcgaggtt
     2581 tccgaatgtt catggtgctc cggtccacct gggcgacccc cagagcatcg gcgtggactt
     2641 gagccggcgc taccttaatg tcggtgatcc ggaggtcgac gaggacgaac tgccggtatt
     2701 ctgggcttgc ggacttactc cgcaattggc cgtgaagaat gcgaccccgc caatgtgcat
     2761 cactcacgca ccgtcctcca tgctgatcac ggacttgcgg aacgcgtctc ttgccgtgct
     2821 gtagcgacac ctccgcgatt tcgaactgcc tgctcgcgcc atgctgagct caacaggatc
     2881 ccgggcattc gcgaatccgc gcgccacgcg taatgcgcct tatgccgctg acgagcgcgc
     2941 agcgatcctg agtctcgcag cgttggcctg cgccaaacgc gagatcatgg cgtggcccgg
     3001 ctacaaaccg acaccagtgc atcccctacc gaagctggcg gcgcgggccg ggattgaggc
     3061 gattctctac aaagacgaag ccgaacgttt cggcctcggg agcttcaagg cgctgggcgg
     3121 tgcctacgcc gtattcaaac tgctgcgaaa gagtattcag gagcagaaaa acgtcaccgc
     3181 gtcgtcgctc gacctcacat cgggtcgtta cgccgatgtc acgtcgcgca ttacggtgac
     3241 gtgcgcaacc gacggcaatc acggtcgctc cgtcgcatgg ggagcgcgca cctttggttg
     3301 ccggtgcgtg atttatatcc cagaaaccgt cagcgcgggt cgctgccagg cgatcgccgc
     3361 ctatggcgcg gagatcaggc gcttcgccgg gacttatgac gacggcgttc gacgcgccgc
     3421 tgcggatgca gcggcggagg gctggatggt ggtttctgac acggcttatg agggttacac
     3481 cgacgtcccg cgtgacgtga tgcagggcta tagcctcatg gtcgaggagg cactgcggca
     3541 gacatcagcc ccgccatccc acgtcttcgt ccagggaggc gtcggagggt tggcggcaag
     3601 tgtgtgcgca tatctttggg agcggtatgg ctctgcacgc ccctttttcg tggtcgtcga
     3661 accggaaaaa gcagactgct tttaccgcag cggtgtcgca ggccgtccga caccggcaga
     3721 gggcgcgctc gacaccatca tggcaggcct ggcctgcggc gaggtctcac cgctggcctg
     3781 gcgtattctc gcgacgggcg ccgacgcatt catgaccatc gatgacgaag cggcagtcga
     3841 ttgcatgcgg ctgttggctg atggccgctt cggcgacgat cccgtcgtgg cgggtgaatc
     3901 ggcggtggcg ggactggccg gcttgctgat ggcaagcacc gactccgatg cgcgggcacg
     3961 tctcgatcta caccgcgaca gtcgcgtcct cgtctttggc accgaaggag ccacggatcc
     4021 ggaggtttac cgcaccatcg tcggccgtcg acccgatgag gtggttgctc ggcggggcac
     4081 atgatgaata gcagccccac cgatgccgtt tgtcgcgaca tagatgcggc gcgcgaggag
     4141 ctgatcgagc tgtgcggtca gttggttgca gcggcgagcg tcaatccgcc cggccgtacg
     4201 gtcgaggtag ccgaggtggt gcgcgcctat ctgtcgggtt acggcatcgc caccgagatg
     4261 gtgacggccg acgatgaggc tcccaatatt gttggctgcg tcgaggccgg tgccggggga
     4321 cgtcacgtcg tcttcaatgc gcatatggac accatggaag ccggcgacga ggtggcgtgg
     4381 accgtcccga tcacgcggct ctcgcgccgc gatggccgtc tctatggact cggaatgggt
     4441 aacatgaagg gcgcattggc ggcgatgtgc ctagcgacgg ccattctcaa acggcacagc
     4501 aatgcgtgga agggtcgttt gaccctgacc gcggtctccg atgaggtcat gttcggagag
     4561 cgcggcgctg tcttcctgct acgggagcgg ccggatgttg ccagcgactt tctgatcagt
     4621 ggcgaaggtc cgggattcat gcacttcgcc gtcgccgaga aaggtctgct ctggctcgat
     4681 gtggaggcgc gctctggcgg cggacacgcg tcgcgggcgc tgcgcgggga cactgcggta
     4741 acgaagctcg ccgccttctt ggcccgcatc gatgcgatga acgagatgta tgcgaccttg
     4801 ccgcgcgagc ttaccggggt gagcggtggt gagggaaatc tcgggcttcg gctctcgctg
     4861 aatgcaggga cgctggcggc tggcacggtt cgcagccaag tggcgccacg cgcgcgggcg
     4921 cagctcgata tccggcttcc acccgggatc agcgcgcagg catgtgagag gatgatccgc
     4981 gagcggacgg acggcgatgc catcagcatc gccgtagtca agtcctggga cgccaattgg
     5041 actgcgctcg acaacccgtt ggtggtcgag ctggcgaccg cggcgaccct ggtgcgcggc
     5101 atcgcaccac ctttcgtggt acgcttgccg ggaagcgacg cccggcgctg gcgcgagctc
     5161 ggcgtccctg cggtctgcta tggtccccag ccaacgctgt cagccggcgt cgacgattac
     5221 gcgaacgagc aggacgtcgt cgattgcgcg aagatctatg cgcggacggt gctggcgctg
     5281 atgcgccgct gagacggcgg ctcgattaca ttgtcgcgtc taccatgagc gacaatgcgc
     5341 gcacacccgc ccgcgtcgtg tggaagatcg gcacgtcggc cccttcgaga tccgcggtcc
     5401 agcgctgctg cgcctctcca ccgtagatta cgagcgcaac gggcttatca taggcgcggc
     5461 gcaggcgccg cagaagctcg ccgaattccg ggaaatcggc gttgcctggc gcaagcaagg
     5521 tgcagagcac aaggtccaca ttcggatcgg caaacagcgc cgtgagtccg atttcgtgcg
     5581 cttcgcgtgg tcccttgatg tcaataccaa tccagaagtc gaacg
//
LOCUS       DATCWM010000089         2164 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_378607, whole genome shotgun sequence.
ACCESSION   DATCWM010000089 DATCWM010000000
VERSION     DATCWM010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2164
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_378607"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..684
                     /locus_tag="VIQ50_01650"
     CDS             <1..684
                     /locus_tag="VIQ50_01650"
                     /inference="COORDINATES: protein motif:HMM:NF042682.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6537 domain-containing protein"
                     /protein_id="HEY9359110.1"
                     /translation="GRLVRETARHLAVRMSYEDVIRVAQAKIDPARIARIGAELGVKP
                     GEPFMVTEFLKPGIEELCSLLPPAPATRILAFAERRGLSERLHWGMEVNTTSVFGFLR
                     VWLLAKLRRWRRKSYRFHGEQGSIEAWLGRVIEAARLSPDLALEVAECARLIKGYGDT
                     LKRGSANYRLIETRIIDPVLAGRMPPARGLDAIASARAAALADPEGEALTRCIAEIEA
                     QGIVSIAAE"
     gene            981..2003
                     /locus_tag="VIQ50_01655"
     CDS             981..2003
                     /locus_tag="VIQ50_01655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007759303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9359111.1"
                     /translation="MRIDAYTHFFPKKFFDKMQEVAGDYKDMGKRVRSLPALFDLDHR
                     KKMVDGFKDYRQILSYPQPPVETFAKTPAQIDELIRLINDGFAELCAKERDHFPGWVA
                     QISLDAPDAGVREAERAIKELGALGVQIYTNVAGKPLDRPQYLPFWKKMNELGKPVWM
                     HPARGANMPDYIDEKKSLYEIWWTFGWSYETATAMARLVFSKIIDNHPNLKIITHHFG
                     GIVPMLEGRIGPGWDVLGSRTSDEDYVSLRKSLKKRPLDYFKQDFYADTAVFGGKPAT
                     KCGLEFFPLEKIVFASDCPFDPEGGTMYPRLTLEILDSLDISKADREKLDYKNLEAIT
                     GRKLVN"
BASE COUNT          416 a          672 c          691 g          385 t
ORIGIN      
        1 gggcggctcg tgcgcgagac agcgcggcac ctcgccgtgc gcatgtcata tgaggacgtg
       61 atccgagtgg cgcaggccaa gatcgatccg gcgcggatcg cgcgcattgg cgccgagctg
      121 ggcgtcaagc ccggcgagcc gttcatggtc acagagttcc tcaagcccgg catcgaggaa
      181 ctatgctcgc tgcttccgcc cgcgcccgcc acgcgcattc ttgcatttgc cgagcgacgc
      241 ggtttgagcg agcgcctgca ttgggggatg gaggtcaata ccacctcggt tttcggattt
      301 ctgcgcgtct ggctgctggc caaactgcgc cggtggcgac ggaaatcgta ccgcttccac
      361 ggggagcaag gctcgatcga agcgtggctc ggacgcgtca tcgaggcggc gcggctctcg
      421 cccgatctcg cgctcgaagt cgccgaatgc gcacggctga tcaagggcta tggcgatacg
      481 ttgaagcgcg gcagcgccaa ttaccggctg atcgagacgc gcatcatcga tccagtcctg
      541 gccggacgca tgccgcccgc ccgcggcctg gacgccatcg cgagcgcgcg cgccgctgcg
      601 ctcgccgatc ccgagggtga ggcgctcacg cgctgtattg ccgagatcga ggcgcaaggc
      661 atcgtgagca tcgccgccga gtaggccggc aagtattatg atggactccg ggcattcgag
      721 ccgttaagag caacggcgtt aaatgctgat ctattctctg ccgacatggc cgggcttggc
      781 accgcaaagt cgcgtttacg cgacttgcgg cactgaatat tgcggaattc gggcaggccc
      841 gagctccgat gccatccacg tctttgttgg atcaaggaag agaaaactgg atgcccggca
      901 gcgcagacaa gtttagcgca gtctgcgcag gcttgactgc atgccgggca tgacgaaaga
      961 gagaacccgg agaactgcag atgcggatcg atgcgtacac acactttttt cccaagaaat
     1021 tcttcgacaa gatgcaggag gtcgcgggcg actacaagga catgggcaag cgcgtgcgct
     1081 cgctgccggc gctgttcgat ctcgatcatc gcaagaagat ggtcgacggc ttcaaggact
     1141 atcggcagat cctgtcctat ccgcagccac cggttgagac tttcgccaag actccggccc
     1201 agatcgacga gctgatccgc ctcatcaacg acggctttgc cgagttgtgc gccaaggagc
     1261 gcgaccattt tcccggttgg gtcgcgcaga tatcgctcga tgcacccgat gccggcgtgc
     1321 gcgaggcgga gcgcgcgatc aaggagctcg gcgcgcttgg cgtgcagatc tacaccaacg
     1381 tcgccggcaa accgctcgac cggccgcaat atctgccgtt ctggaaaaaa atgaacgagc
     1441 tgggaaagcc ggtctggatg caccccgccc gcggcgccaa tatgccggac tatatcgacg
     1501 agaagaagtc actctatgaa atctggtgga cgttcggctg gtcgtacgag acggcgaccg
     1561 ccatggcgcg cctggtgttc tcgaagatca ttgacaacca tcccaacctc aagatcatca
     1621 cccatcactt tggcggcatc gtgccgatgc tcgaggggcg catcgggccg ggttgggacg
     1681 tgctgggctc gcgcaccagc gacgaggatt acgtctcgct gcgcaagagc ctcaagaaac
     1741 gcccgctcga ctatttcaag caggacttct acgccgacac cgcggtgttc ggcggcaagc
     1801 cggcgaccaa atgcggcctg gagttcttcc cgttggagaa gatcgtgttc gcctccgact
     1861 gcccgttcga tccggaaggc ggcacgatgt atcctcgcct tacgctcgaa atcctcgatt
     1921 cgctcgatat ctcgaaggcc gaccgcgaga agctcgatta caagaatctg gaagccatta
     1981 ccggccgcaa actggtaaac tagggcgtcc ggactgcgcc gcgcccggcg caagcgaggc
     2041 agggacgcca tgcatatttc ccgccgtcgc tttctgcatc aagcggtcgc ggccggcgcg
     2101 gtttgcgccg cggcgcgggg cgcccgcgcg caggcctatc cggcgcggcc gctgcgctgg
     2161 gtgg
//
LOCUS       DATCWM010000090         4041 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_324673, whole genome shotgun sequence.
ACCESSION   DATCWM010000090 DATCWM010000000
VERSION     DATCWM010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4041
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_324673"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..591)
                     /gene="queF"
                     /locus_tag="VIQ50_01660"
     CDS             complement(139..591)
                     /gene="queF"
                     /locus_tag="VIQ50_01660"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033739 - preQ1 synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preQ(1) synthase"
                     /protein_id="HEY9359112.1"
                     /translation="MARTLRHLGKPSRLPASPQAAVLDRVANPHPDTDYVARFTAPEF
                     TTLCPITGQPDFAHLVIDYVPAKWLLESKSLKLYLGSFRNVGAFHEDCTVAIGKKLVA
                     LLKPKFLRIGGYWYPRGGIPIDVFWQSGKLPRNVWLPDPGVASYRGRG"
     gene            737..2017
                     /gene="eno"
                     /locus_tag="VIQ50_01665"
     CDS             737..2017
                     /gene="eno"
                     /locus_tag="VIQ50_01665"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004634 - phosphopyruvate hydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEY9359113.1"
                     /translation="MTAITDIIGREILDSRGNPTVEVDVVLEDGTRGRAAVPSGASTG
                     THEAVELRDGGKRYLGKGVRKAIDAVNGEIFDAVGGMDAEAQAKIDETLIALDGTPNK
                     GRLGANAILGVSLAVAKAAAAAHSAPLYRYVGGTSARLLPVPMMNILNGGVHADNPLD
                     FQEFMIMPVGAASFAEALRMGAEIFHTLRAALKQAGQDVNVGDEGGFAPDLPTADAAL
                     DFVMTAIHKAGFAPGKDVCLALDPAATEFFKDGGYRYEGEGKVRSKREQADYLADLVS
                     RYPIVSIEDGMAEDDMEGWKTVTDLIGDRCQLVGDDVFVTNVARLAEGIKNGIANSIL
                     IKVNQIGTLTETLATVEMAHKAGYTAVMSHRSGETEDATIADLAVATNCGQIKTGSLA
                     RSDRTAKYNQLLRIEEELGAQARYAGRTALKALR"
     gene            2086..2403
                     /locus_tag="VIQ50_01670"
     CDS             2086..2403
                     /locus_tag="VIQ50_01670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation initiator family protein"
                     /protein_id="HEY9359114.1"
                     /translation="MVTRKRFRTAINALALYTIAALVIGYFGVNAYSGNRGLRAKQDL
                     DQQIAELTAELDALKAERAQWERRIVLLKPESIDPDMLDERARILLNYADPRELTLRL
                     KQP"
     gene            2578..3621
                     /gene="pdhA"
                     /locus_tag="VIQ50_01675"
     CDS             2578..3621
                     /gene="pdhA"
                     /locus_tag="VIQ50_01675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045250 - cytosolic pyruvate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HEY9359115.1"
                     /translation="MAVASNKPAAQPAAVRRASVESAPQVPEFSQEQELHAYRQMLLI
                     RRFEEKAGQLYGMGLIGGFCHLYIGQEAVVIGMQMAIKPGDEVITGYRDHGHMLACGM
                     DPKGVMAELTGRRGGYSKGKGGSMHMFSVEKGFFGGHGIVGAQVPLGTGLAFANKYRG
                     NDNVSLTYLGDGATNQGQVYESFNMAKLWKLPVIYIIENNQYGMGTSVARASATVNLS
                     QRGRSFDIPGEQIDGMDVRAVKAVGDKAVKWCRDGNGPIILEMLTYRYRGHSMSDPAK
                     YRPKEEVDKMRTEHDPIEQVRSRLLKRGFASEDSLKKIDAEVRATINEAAEFASSDAE
                     PDPAELWSNVYAE"
     gene            3742..>4041
                     /locus_tag="VIQ50_01680"
     CDS             3742..>4041
                     /locus_tag="VIQ50_01680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HEY9359116.1"
                     /translation="MPIEVLMPALSPTMEKGNLAKWHKKEGDAVKSGDVIAEIETDKA
                     TMEVEAVDEGTLGKILVAEGTNDVAVNTPIAMILGEGEDASALTDGGTAARRQKAP"
BASE COUNT          805 a         1260 c         1311 g          665 t
ORIGIN      
        1 gatcggcggc gtgaacgcga cgcgggcggc agaagttctc gccgccggac cggccggtat
       61 cgccgtcatg ggcagcatca tgcgcgcgct cgaacctacc cgcgaagtga aggcgctctt
      121 ggcaatcgtt gccgcggctt atccccggcc gcgataggag gctacgccag gatcgggcag
      181 ccaaacgttc ctgggcaact tgcctgattg ccagaaaacg tcgatcggga tgccgccgcg
      241 cggataccag tacccgccaa tgcgcaaaaa tttgggcttg agcagggcca cgagcttctt
      301 gccgatcgcg accgtgcagt cctcgtggaa ggcgccgacg ttgcggaagc tgccgagata
      361 gagtttcaac gatttggatt cgagaagcca ttttgccggc acgtagtcga tcaccaagtg
      421 ggcgaagtcg ggctgaccgg tgatcgggca cagcgtggtg aattccggcg cagtgaagcg
      481 cgcgacgtag tcggtgtcgg ggtgggggtt ggcgacgcga tcgagcaccg ctgcttgcgg
      541 ggaggcgggg aggcgactcg gcttaccgag atgacgaagc gttctggcca atgtcttatc
      601 ctcgtcatcg agcgcaactt taacgcgccg aagccgattt gatcgaacgg aaccgcccgt
      661 acaggttatt ggatgccgcg cttccgcggg acatgacaag ggtattttcc atcctgtaga
      721 aggcaggcga ggccccatga cagccatcac cgacatcatc ggccgcgaaa tcctcgacag
      781 ccgcggcaat ccaaccgtcg aggtcgatgt ggtgctcgag gatggcacac ggggccgcgc
      841 cgcggttccc tcgggagcct cgaccgggac gcacgaagca gtcgaactgc gcgacggcgg
      901 caagcgctat ctcggcaagg gcgtgcgcaa ggcgatcgac gccgtcaatg gcgaaatctt
      961 cgatgccgtc ggcgggatgg atgcggaggc gcaggccaag atcgacgaga cgctcatcgc
     1021 cctcgacggc acgccgaaca agggccggct cggcgccaat gccatcctgg gcgtgtcgct
     1081 tgccgtcgcc aaggccgcgg ccgccgccca cagcgcgcca ctctaccgct atgtgggagg
     1141 gacttcggcg cggcttctgc ccgtaccgat gatgaacatc ctcaatggcg gcgtgcacgc
     1201 cgacaacccc ctcgattttc aggaattcat gatcatgccg gtgggcgcgg cgtccttcgc
     1261 cgaagcgctg cgcatgggcg cggagatttt tcacacgctg cgagcggcgc tcaaacaggc
     1321 gggccaagac gtcaatgtgg gcgatgaggg tggctttgcc cccgacctgc ccacggccga
     1381 cgccgcgctc gacttcgtca tgacggcgat ccacaaggcg ggcttcgcgc cgggaaagga
     1441 cgtttgcctc gcgcttgacc cggccgcaac cgagtttttc aaggacggcg gctaccgcta
     1501 cgagggcgag ggcaaggtcc gttcgaagcg cgagcaggca gactatctcg ccgatctcgt
     1561 ttcccgctat ccgatcgtct ccatcgagga tggaatggcg gaggatgaca tggagggctg
     1621 gaagaccgtg accgatctga tcggcgacag gtgccaactg gtcggcgatg atgtcttcgt
     1681 caccaacgtc gcgcggctcg ccgagggcat caagaacggc attgccaatt cgatcctgat
     1741 caaagtcaac cagatcggca cgctgaccga gacgctcgcg acggtcgaga tggcgcacaa
     1801 ggctggctac accgccgtca tgtcgcaccg ctcgggggag accgaggatg cgaccatcgc
     1861 cgatctcgcg gtcgcgacca attgcgggca gatcaagacc ggctcgctcg cccgctccga
     1921 ccgcacggcc aaatacaatc aactgctgcg gatcgaggag gaactgggcg cgcaggcgag
     1981 gtacgcaggc cgcaccgccc taaaggcatt gcgctgaagg ggacggagcc gccttgcgcg
     2041 ccaggcatta aaaccgtctt aacaccgccg cggcatggtt gcgcaatggt cacccgcaag
     2101 cggtttcgca cggccatcaa cgcgctggcg ctttacacga tcgccgcgct ggtaatcggc
     2161 tattttggcg tcaacgccta ttccggcaac cgcgggcttc gcgccaagca ggacctcgat
     2221 cagcagatcg cagagctcac tgcggaactt gatgcgctca aggccgagcg cgcccagtgg
     2281 gaacgccgca tcgtgctgct caagccggaa agcatcgatc ccgacatgct cgacgagcgt
     2341 gcccggatcc tgctcaacta tgccgatccg cgcgagctga cgttgcgcct caagcaaccc
     2401 tgatcaccgc gccggccgtc tcgggcggcc gccgaatttg cgaaatcggc ttctctacct
     2461 atttgccgcg gcaaaagagg ccggcgcgcc ggtccccatc cgcttccgcc gtgcggcaat
     2521 ttcggctatt ggggacggac gcctcaccga cgtagagccc cccacccgag gagaaaaatg
     2581 gccgttgcca gcaacaaacc agcggctcag cctgccgccg tgcgccgggc atccgttgag
     2641 tcggcgccgc aggtgcccga gttcagccag gagcaggagc ttcatgccta tcgccagatg
     2701 cttctcatcc gccggttcga ggaaaaggcg gggcagctct acggcatggg attgatcggc
     2761 ggtttttgcc acctctacat cggtcaggag gcggtcgtca tcggcatgca gatggcgatc
     2821 aagccaggcg atgaggtcat caccggatac cgcgatcatg gtcacatgct ggcgtgcggc
     2881 atggacccca agggcgtgat ggcggagttg accggccggc ggggcggcta ttccaagggc
     2941 aagggcggct cgatgcacat gttctctgtc gagaagggct ttttcggcgg acacggcatc
     3001 gtcggcgccc aggttccgct cggaaccgga ttggccttcg ccaacaaata ccgaggcaac
     3061 gacaatgttt cgctaaccta tctgggcgac ggcgctacca atcagggcca ggtctacgaa
     3121 agcttcaaca tggccaagct gtggaagctg ccggtcatct atatcatcga aaacaaccag
     3181 tacgggatgg gcacctccgt tgcccgggca tcggcgaccg taaatctctc ccagcgcggg
     3241 cgctccttcg atattcccgg cgagcagatc gacggcatgg acgtgcgcgc ggtcaaagcc
     3301 gtcggagaca aggcggtgaa gtggtgtcgc gacggcaacg gtcccatcat cctcgaaatg
     3361 ctgacttatc gctatcgcgg ccactccatg tcggatcccg ccaagtaccg acccaaggag
     3421 gaggtcgaca agatgcgcac cgagcacgat ccgatcgaac aggtgcgcag ccgcctgttg
     3481 aagcggggct ttgccagcga agactctttg aagaagatcg atgccgaagt acgcgcgacg
     3541 atcaacgaag cggccgaatt cgcgagcagc gacgcggagc ccgatccggc cgagctctgg
     3601 agcaacgtct acgccgagta ggatatggcc ggtgcactcg acaaattgct ccccgccttc
     3661 ttgcccggtg cccgccgggc ggtgacatcg gctacgtctc tcgcgcgggt ctgcgctgga
     3721 ccgtcaacgc ggtgatgctc gatgccgatt gaagtgctca tgcccgcgct ctcgcccacc
     3781 atggagaaag gcaatctcgc caagtggcac aagaaagaag gcgacgccgt caaatccggt
     3841 gacgtgatcg ccgagatcga gactgacaaa gccaccatgg aggtcgaggc ggtcgacgag
     3901 ggcacgctcg gaaaaatttt ggtggcggaa ggaaccaacg acgtggcggt caatacgccg
     3961 atcgccatga tcctgggcga gggcgaggac gcctccgcat tgaccgacgg cggtaccgcg
     4021 gcgcgccggc agaaggcgcc g
//
LOCUS       DATCWM010000091         2244 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_265316, whole genome shotgun sequence.
ACCESSION   DATCWM010000091 DATCWM010000000
VERSION     DATCWM010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2244)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2244)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2244
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_265316"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..298
                     /locus_tag="VIQ50_01685"
     CDS             <1..298
                     /locus_tag="VIQ50_01685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359117.1"
                     /translation="FHEVPMSTRSEVKKAKLEHPANHYKSPDEITKDTDLSEDEKRQA
                     LNTWEQDARQMMTASNEGMEGDDEGLDQSDTHRLGEVVRAKAKIGAKPKHKPSH"
     gene            678..986
                     /locus_tag="VIQ50_01690"
     CDS             678..986
                     /locus_tag="VIQ50_01690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359118.1"
                     /translation="MQIAQLTIFRAVALPMRGGNLQGDQCMVRVNKPMAAVLALGVAI
                     STLATPSFAQRSDEGGSSAREKALHDCNVEAGKMTQHTWGDHQVHKYRSCMMQKGEQE
                     "
     gene            complement(1134..1844)
                     /locus_tag="VIQ50_01695"
     CDS             complement(1134..1844)
                     /locus_tag="VIQ50_01695"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family cysteine hydrolase"
                     /protein_id="HEY9359119.1"
                     /translation="MHTLSIPQSVVDRVIERRGREHIYDNLDPAKTALVVVDMQNAFM
                     LPGVAHALCPMAEKIVPNINRLARAVRETGGTVVWIKTTFTEDALRSWSTYFDMVTPQ
                     HGAKRVQALTAGSEGHQLWAALDVRTEDLIVEKNRFSAFIQGSSNLAEILRRRGIDTI
                     LVTGTVTNVCCESTARDAMMLNFKTIMVTDGNAAVTDQDHNASLCAFYLTFGDIMSTN
                     MLIACLGRTASSNLAAAE"
     gene            complement(1880..>2244)
                     /locus_tag="VIQ50_01700"
     CDS             complement(1880..>2244)
                     /locus_tag="VIQ50_01700"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEY9359120.1"
                     /translation="ARTGADVQAVVSMHGTLTTPQPAKRGDVKAAVLVVHGAADPVAP
                     KAERDAFEAEMTDAGACWALLTFGDVYHGFTDPQANAPGRAAYDEPATRHGYALAHAF
                     IADAFAGKRHGCPASSPA"
BASE COUNT          436 a          685 c          734 g          389 t
ORIGIN      
        1 atttcatgag gtccccatga gcacgcggtc ggaagtgaag aaggccaagc tcgagcaccc
       61 ggcaaatcac tacaagtcgc cggacgagat caccaaggat accgatttgt cggaggacga
      121 aaaacgccag gcgctcaaca cctgggaaca ggacgcgcgg cagatgatga ccgccagcaa
      181 cgagggcatg gagggggacg acgaggggct cgaccaaagc gacacgcatc ggctcggcga
      241 agtcgtgcgc gcgaaagcca agatcggcgc aaagcccaag cacaaaccgt cgcattagga
      301 ttggacggtc cgccagcttt ctagcgccaa agttcgctcc gctgatccgg ctacgcagcg
      361 tgtaagtagg taagagatac cctctctcga cgcggcaccc agcgccgttg taaacggcat
      421 aacctcgcac ggaaaagggt cttgaagttc gtcgccacgc gcgccggggt acctgggcac
      481 gccgtgcgtc gatgaggcga gtgccccgcc agggccttac tgtgcccccg caaccatctc
      541 tcggcgcgca tcccgaactc gtctgatcgt cggcgaaccg cgagggcaca tggctgcagt
      601 agacttttca cgggctctgc gcggggatgt caattttgta accgttccca cgagatgcga
      661 gacgcagatt tgcagcagtg cagatcgcgc agctgacgat tttccgcgcc gtcgcgttac
      721 ccatgcgcgg ggggaatttg caaggagatc aatgcatggt tcgtgtgaac aaaccaatgg
      781 ccgcagtgct tgcgctgggg gttgcgattt ccacgctcgc cacgccgagc ttcgcgcaac
      841 gaagcgacga aggcgggagc agcgcgcggg aaaaggcgct gcacgactgc aatgtcgagg
      901 cggggaaaat gacccaacat acctggggcg accaccaagt gcataagtac cggtcctgca
      961 tgatgcagaa aggtgagcag gaatagcggc gctcggtaca aacgaggggc gcgaccgtct
     1021 catccggtcg cgccctcccg cgtctcgcaa cggttactcc cgccgccagc tcttggcgaa
     1081 cgccatatcg gctccaggcc cttcacccaa gcccgctcgc ccggttttgc gtcttactcg
     1141 gccgccgcca ggttgctcga ggccgtgcgc cccaggcaag cgatcagcat gttagtcgac
     1201 atgatgtcac cgaaggtgag atagaacgcg cagagcgatg cattgtggtc ctggtcggtc
     1261 acggcggcgt tgccatcggt taccatgatc gtcttgaaat tgagcatcat ggcgtcgcgc
     1321 gcggtcgatt cgcagcacac gttggtgacc gtgccggtga cgagaatggt atcgatcccg
     1381 cgccggcgca ggatttcggc gagattcgag gagccctgaa tgaaggcgct gaaacgattc
     1441 ttctctacga tgagatcttc cgtgcgcaca tcgagcgcgg cccagagctg atgcccctcg
     1501 ctgccggcgg tgagcgcttg cacgcgttta gcgccgtgtt gcggcgtcac catgtcgaaa
     1561 taggtcgacc agctccgcag cgcgtcctcc gtgaaggtgg tcttgatcca gacgacggtt
     1621 ccgccggtct cgcgtaccgc gcgcgcgaga cgatttatgt tgggcacgat cttttccgcc
     1681 atcgggcaga gtgcgtgcgc aacgcccggc agcataaacg cgttctgcat gtcgaccacg
     1741 accagtgcgg tcttggccgg atcgagattg tcatagatgt gctcgcggcc gcgccgctcg
     1801 atgacgcgat cgacgaccga ttgcggaatg gacagcgtgt gcatcgaagg ttcctcctcg
     1861 cgaggacggg acgagattat catgccggcg atgacgcggg acaaccatgc cgcttcccgg
     1921 caaacgcgtc ggcgatgaag gcatgggcga gcgcatagcc gtggcgggtg gcgggttcgt
     1981 cgtaggccgc gcgtccgggt gcgttggcct gcgggtcggt gaagccgtgg tacacgtcgc
     2041 cgaaggtgag cagcgcccag catgcgccgg cgtccgtcat ctccgcctcg aatgcgtccc
     2101 gctcggcctt cggcgcgacc gggtcggcgg cgccatgcac gacaagcact gctgctttga
     2161 cgtcaccgcg cttggcgggc tgcggcgtcg tcaaggtccc gtgcatggag acgaccgcct
     2221 gcacatcggc gccggtgcgg gcga
//
LOCUS       DATCWM010000092         3116 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_49354, whole genome shotgun sequence.
ACCESSION   DATCWM010000092 DATCWM010000000
VERSION     DATCWM010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3116
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49354"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..804
                     /locus_tag="VIQ50_01705"
     CDS             <1..804
                     /locus_tag="VIQ50_01705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019904162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359121.1"
                     /translation="PPLDAPRVPIDYELMKSVGHSTMALGQIVAPYVNSPNDKSWRPS
                     MATYRIRMQAALDGLDATALRDDWKPNSRAILQNNIAFMDECLKSDAVTPEGVAEFAK
                     KQAPLLKKNIAWAAQTQVGHWMNVIAGWKQMLGADWDKTYAASNTIYVARQNNILFSV
                     LAQFFGPEAINDRLMLIETISFTTTPDEMLDSLTRIIGDRWVGAAFFGNYYTMDFELM
                     GGDARQAIIDEDAKMKITTTLPPQVPFGSHQWPALITPGPGAKTLADLP"
     gene            932..>3116
                     /locus_tag="VIQ50_01710"
     CDS             932..>3116
                     /locus_tag="VIQ50_01710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007609517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY9359122.1"
                     /translation="MRISRREFVNSVTASGIALSVSRLAIAEEPSFAARETLPGRQAW
                     NPAATGVGRIDGVAKVTGAKLYASDFRAADLPGWPQNTAHAMFILAPDATHVYTGMDL
                     SRLSGALKPAVVVTAADLARIGTRVPEFYAGDLFCPVGTTPLYLGQPVALLIFEQFDA
                     FDQARLALRDGTFVKFGEETGPIRAPDYGAYRFTRVAGPTPDAPDVYSTFKDGLVSPE
                     HFQNTELPVWAPLAMPKAQPYAKAATYGEQIRAELAASNPALLVLDREFENQSNDPVF
                     LEPECGIAWYDAGRKNLELVLGVQSPFENAEAIAFLLGEASAAFKPTRINAQFAYVGG
                     GFGGRDHTPFPMYVALAGMFFPNRPVRLAYDRYQQFQAGIKRHAFKIHTRIGVDRASG
                     KIVAFAADHILDGGGLANFSGTVAKVGAQMAIGVYDIPRVDVTTVALHSRGVTAGSMR
                     GYGVLETNTALEALVDEMCAALSLDPIDFRRRNALKTGGRTLSGNQYDVAIRTSEILD
                     KLEKHPIWQQRADEKARAQAGTLVGTGVACTSKNYGSGGDASLSTVEIGPDGRIVIYC
                     DGAEMGNGIGTAVANRVAAHLGGVADEVAILQVHGFGPLALVTSGNCYTMDQKTQDAA
                     ARNPRWVPAISSATFASIGAYIMTHAAAEAARVIFRFGLWPAALELWGIAPKDPRANE
                     WKTARWKDGQLVMPGLAPLALPAVAAKAHARNGVTGAMTHCFNRWA"
BASE COUNT          590 a          956 c          993 g          577 t
ORIGIN      
        1 ccgccactcg atgctccacg agtgccgatt gactatgagc tgatgaagtc ggttggtcac
       61 agcaccatgg cgctcggcca gatcgttgcg ccttatgtca acagtccaaa tgacaagagc
      121 tggcgtcctt cgatggcgac gtatcgcatc cgcatgcagg cggcgctaga cggactcgat
      181 gccacggctt tgcgggacga ttggaagccg aacagtcgcg cgattctgca gaacaacatt
      241 gcgttcatgg acgaatgtct gaagagcgac gcggttacac ccgagggtgt ggcggaattc
      301 gccaagaaac aggctccgct cctgaagaag aacattgctt gggcggcgca aactcaggtc
      361 ggccattgga tgaacgtgat cgccggctgg aaacagatgc ttggggccga ctgggataag
      421 acctatgcag ccagcaacac gatctacgtc gcgcgacaga acaacatcct gtttagcgta
      481 cttgcgcagt tcttcgggcc cgaagccatc aacgatcggc tgatgctgat cgagacgatc
      541 tcgttcacaa ccaccccgga cgagatgttg gattcgctga cccgcatcat cggcgatcgg
      601 tgggtcggtg ctgcgttctt cggcaattac tatacgatgg atttcgagct gatgggcggg
      661 gacgctcgtc aggcgattat cgacgaggac gccaagatga agatcacgac aacgctgccc
      721 ccgcaggtgc cattcggttc acaccaatgg ccggcgttga tcaccccggg cccgggcgca
      781 aagacattgg ccgatcttcc ctgaggccaa aactttccgt accggcgctc acctcctcag
      841 tgagcgccgc tgcacacgaa cgtgggtccg acagcggatt cctgaatagc tcgtccatag
      901 ttccggttca ggcagtgaga ggcgcggcat catgagaatt tcacgacgcg aattcgtcaa
      961 ctcggtcact gcgagcggca tagctctcag cgtgtcgcgc ttggcgatcg ccgaggagcc
     1021 cagctttgcc gcgcgtgaga ccttgcccgg ccgacaggcg tggaacccgg cagccaccgg
     1081 tgtcggtcgc atcgacggcg ttgccaaggt cacgggagcc aagctatacg cgtccgattt
     1141 tcgcgctgcc gatctgccgg gctggccgca gaacaccgcg cacgccatgt tcatcctggc
     1201 cccggacgcc acgcatgttt acaccggcat ggatctctcg cgcctgagtg gcgcgttgaa
     1261 gcccgcggtt gtcgttaccg ccgccgatct cgcgcgcatt ggcacaaggg ttcccgaatt
     1321 ctatgccggc gatctgttct gcccagtcgg cacgacgccg ctctatctcg gccagccggt
     1381 tgctctgttg atcttcgagc agttcgacgc cttcgatcag gcgcgtcttg cgctgcgcga
     1441 tggaactttc gtgaagttcg gcgaggaaac cggccctatc agggcgcctg actacggcgc
     1501 ttatcgtttc acgcgcgtgg ccggcccgac ccctgacgcg cccgatgttt actcgacgtt
     1561 caaggacggt ttggtcagcc ccgaacactt ccagaatacg gaactcccgg tatgggcacc
     1621 gctcgcgatg ccgaaggcgc agccctacgc taaggccgcg acctatggcg agcagatccg
     1681 cgctgaactt gcggcgagca acccggccct tctggtgctg gaccgcgaat tcgagaacca
     1741 atcaaacgac cccgtgtttc tcgagccgga atgcggcatc gcctggtacg acgcgggccg
     1801 caagaacctc gagctcgtgc tcggggtgca gtctccgttc gagaacgcgg aagccatcgc
     1861 gttccttctg ggcgaagcca gcgctgcttt caagccgacg cgcatcaacg ctcaattcgc
     1921 ctatgtcggc ggcggattcg gcggacgcga ccataccccg ttcccgatgt acgttgcgct
     1981 ggcggggatg ttcttcccga atcgtccggt ccggctcgcc tacgaccgct atcagcagtt
     2041 ccaggcgggc atcaagcggc acgcattcaa aatacacacg cggatcgggg tcgatcgcgc
     2101 gagcggcaag attgtcgcat tcgccgccga ccacatattg gatggcggcg gcctcgccaa
     2161 tttctcgggc acagttgcga aggttggcgc ccagatggcg atcggcgtct atgatattcc
     2221 gagagtcgac gttaccacag tcgccctcca ctcacgcggc gtgaccgcgg ggtcgatgcg
     2281 cggctatgga gtgctggaga caaacacggc gctggaggca ttggtcgacg aaatgtgcgc
     2341 ggcgttgtcg ctcgacccga tcgatttccg gcgacgcaac gcgctcaaga ccggcggccg
     2401 gaccctgtcg ggaaatcagt atgacgttgc gatccgcacg tcggagattc tggacaagct
     2461 cgagaagcat ccgatctggc agcagcgtgc cgatgaaaaa gcccgggccc aagcggggac
     2521 actcgtgggg acaggcgtcg cttgcaccag caagaattac ggctccggag gggacgcgtc
     2581 gctctcgacg gtggaaatcg gcccggatgg ccggattgtc atctattgcg acggcgccga
     2641 gatgggcaac ggcattggga cggcggtggc caatcgggtc gctgcccatc tgggtggcgt
     2701 ggccgacgaa gtcgcgatct tgcaggtgca cgggttcggc ccgctcgcgc tcgtgacctc
     2761 cggcaactgc tacacgatgg accagaagac acaggacgcc gcagcgcgca atccgcgttg
     2821 ggtgccggcg atcagttcgg ccacgtttgc ctcgatcggc gcttacatca tgacgcatgc
     2881 ggcggccgag gcggcgcgtg tcatcttccg cttcggtctg tggccggccg cgctcgaact
     2941 gtggggcatc gcgccgaaag atcccagagc gaatgagtgg aaaacggcgc gatggaaaga
     3001 cgggcaactg gtcatgccgg ggttggcgcc gctcgcgttg ccggcggtgg cggcgaaggc
     3061 gcatgcgcgc aacggcgtga ccggggcgat gacgcattgc tttaaccgtt gggcgt
//
LOCUS       DATCWM010000093         2362 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_357027, whole genome shotgun sequence.
ACCESSION   DATCWM010000093 DATCWM010000000
VERSION     DATCWM010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2362)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2362)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2362
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_357027"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(86..490)
                     /gene="mce"
                     /locus_tag="VIQ50_01715"
     CDS             complement(86..490)
                     /gene="mce"
                     /locus_tag="VIQ50_01715"
                     /EC_number="5.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006934701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA epimerase"
                     /protein_id="HEY9359123.1"
                     /translation="MIGRLNHVAIAVRDIAKAADVYRRTLGAQVSQAAPQPEHGVTTV
                     FITLPNTKIELIEPLGAASPIAKFLERNPDGGIHHVCYEVEDIRAARDSLKAQGARVL
                     GDGEAKMGAHGKPVLFLHPKDFCGTLIELEQA"
     gene            complement(631..2298)
                     /locus_tag="VIQ50_01720"
     CDS             complement(631..2298)
                     /locus_tag="VIQ50_01720"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HEY9359124.1"
                     /translation="MPPSDELVFAPLGGVGEIGMNLAIYGFGDERHRRWIAVDFGVAF
                     ADDALPGIDLIMPDIRYLTEERRNLLGLVLTHAHEDHFGALLDLWPRLNIPVYATPFT
                     AALIEAKREGEVGAPEIPVNVVPLGGRFSLGPFDIELVSMAHSIPESNGLIIRTPVGA
                     VLHTGDWKIDPTPVIGPPTDEAKLRALGNEGCLALIGDSTNAFREGRSPSEADVAKCL
                     AELIRSAPARVAVTTFASNVARLRAVAQAAAACEREVVLVGRAMERIAQVARETGYLD
                     GIQDFRSAEVYGHLPPDKVLALCTGSQGEPRAALARIAHDDHPEVAFSRGDRVIFSSR
                     AIPGNEKAVMRVINGLVTQGIEVITDRTHLVHVSGHPRVSELIDMIGWVRPQILIPVH
                     GEALHMAEHAKVARRAGVGKVVLCRDGELVRLAPGDPGKIDEVPAGRLYKDGALVVSA
                     EERTVADRRRLGFAGMVSVALAVNARGDLIGDLRVRLTGIPEAGTLGRRTEELAYDAA
                     VEAFESMPRARRRDPDALAEAIRNAVRAALSAVWNKKPTCHVHVLEV"
BASE COUNT          419 a          784 c          763 g          396 t
ORIGIN      
        1 gttgcggagt gcgcttcgcg cacacgcggc taagctggcg caaggcagca gcgtacagtt
       61 ccagacgacg aaaagtcagt gttccctatg cctgctcgag ctcgatgagc gtgccgcaaa
      121 agtccttcgg gtgtaggaac agcacgggct tcccatgggc acccatcttc gcctcgccat
      181 cgccgagcac ccttgcacct tgcgccttga gactgtcccg cgcagcgcga atatcttcga
      241 cttcgtagca cacgtggtga atgccgccgt cgggattgcg ctcgaggaat ttcgctatcg
      301 gggacgcggc cccgagcggc tcgatgagct cgatcttggt gttgggcaag gtgatgaaaa
      361 cggtcgtgac cccgtgctcc ggctgcggcg ccgcctggga tacctgtgcg cccagggtgc
      421 ggcgatagac gtctgcagcc ttggcgatgt cgcgcacggc gatcgctaca tgattgagcc
      481 gtccgatcat ggtcatctcc tgcgaccgtt tcattgcccc tccgccccca cgcgggccaa
      541 ccggcgtcaa ggacgcgggt taggagccgc gcatccatcc ttgttttcga tgatcatgga
      601 tcgccgggtc aagccgggac aacgtttccg tcaaacctcg agcacgtgca cgtgacatgt
      661 gggcttcttg ttccacacgg cgctcagcgc ggcgcgcacc gcattgcgta tagcctcggc
      721 gagcgcgtcg ggatcgcgtc ggcgagcgcg cggcatcgac tcgaaagcct cgaccgcggc
      781 gtcatacgcg agttcctcgg tgcgacgtcc cagcgtgccg gcttcgggga tcccagtcag
      841 cctcacccgc aggtcgccga tcaagtcgcc gcgtgcgttc accgcgagcg caaccgagac
      901 catcccggca aaaccgagcc gacggcgatc ggcgacggtg cgctcttccg cgctgacgac
      961 cagcgcgccg tctttgtaga gccgtcccgc cggcacttcg tcgatctttc ccggatctcc
     1021 gggcgcgagc cgcaccagtt ccccatcgcg acacagaacc accttgccga cgccggcgcg
     1081 acgcgcgacc ttggcatgct cggccatgtg cagagcctcc ccgtgcaccg gaatgaggat
     1141 ctgcggccgt acccacccaa tcatgtcgat caactcgctc acccgcggat gcccggagac
     1201 gtgcacgaga tgggtgcggt cggtgatgac ctcgatcccc tgggtaacga ggccgttgat
     1261 gacccgcatg accgcctttt cgttgccggg gatagcgcgc gaggagaaga tcacgcgatc
     1321 gccgcgcgag aacgccactt caggatgatc gtcatgagcg atgcgggcga gcgccgcccg
     1381 cggctcgccc tggctgccgg tgcagagcgc gagcactttg tccggcggca gatgaccata
     1441 gacctccgcc gagcgaaaat cctggatgcc gtcgaggtag ccggtctcac gcgcgacctg
     1501 cgcgatgcgc tccatggcac ggcccaccag cacgacctcg cgctcacacg cggccgcggc
     1561 ctgcgccacc gcgcgcagcc gcgccacgtt ggaggcgaac gtcgtgaccg caacccgcgc
     1621 tggggcgctg cggatgagct cggcgagaca cttggcaacg tcagcctccg agggggagcg
     1681 gccctcgcgg aaggcgttgg tcgagtcccc aatcagcgcg aggcatccct cgttgccgag
     1741 ggcgcgcagc ttggcttcgt cagtcggagg tccgatcaca ggcgtcggat cgatcttcca
     1801 atcgccggtg tggagcacgg cgccaaccgg cgtgcgaatg atgaggccgt tcgactccgg
     1861 gatcgaatga gccatggaca cgagttcgat gtcgaacggt ccaaggctga atcggccacc
     1921 caacggcacg acgttgacgg gaatttcagg tgcgccaact tcgccctccc gcttggcctc
     1981 gatcaacgcg gcggtaaacg gcgtggcata gaccggaata ttgagccgcg gccacaggtc
     2041 aagcaaagcg ccgaagtgat cttcgtgcgc atgtgtgagc acgagtccca aaaggttgcg
     2101 tcgctcttcc gtgagatagc ggatatccgg catgatgaga tcgatgccag ggagcgcatc
     2161 atcggcgaaa gcaactccga aatcgaccgc gatccatcgg cggtggcgct catcgccgaa
     2221 tccgtaaatc gcgaggttca tgccgatttc gccgactccg ccgagcggcg cgaacacgag
     2281 ctcatcggag ggaggcacgg gcgcgatctc aatcacgtcc cgctgcgggg cggtgcgggc
     2341 gtgaacacgt cgccggcggc ga
//
LOCUS       DATCWM010000094         2174 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_70990, whole genome shotgun sequence.
ACCESSION   DATCWM010000094 DATCWM010000000
VERSION     DATCWM010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2174)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2174)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2174
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70990"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            86..1063
                     /locus_tag="VIQ50_01725"
     CDS             86..1063
                     /locus_tag="VIQ50_01725"
                     /inference="COORDINATES: protein motif:HMM:NF024376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhnD/SsuA/transferrin family substrate-binding
                     protein"
                     /protein_id="HEY9359125.1"
                     /translation="MANLKLTLACWDYDRTRPLIDGRVKPEGIDFDIEILRPRHAFQR
                     MLDNKEFDVSELSLASYTALKGRGACPFVAVPVALSKMFRHSCIYVRTGAGIVTPQDL
                     KGKRVGTSQWSSTGLVFMRGMLQHDYGVKPQDMHWFMGGLNTFVEPPLIALDLPKDIR
                     LDFLSGAQTLEQMFAAGELDALLSLYIPKLFLEGSPTIARLFANYKEVEGDYYRRTRI
                     LPIMHTVLLREDVYRQHPWAARSIYRAFAEARDLAVGGLYDTDALRVALPWLIDHVEE
                     ARRVFGADFWAYGLEPNRPAFGAIGRYVHEQGLSPRVVSADELFAPGVE"
     gene            complement(1493..2068)
                     /locus_tag="VIQ50_01730"
     CDS             complement(1493..2068)
                     /locus_tag="VIQ50_01730"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003905 - alkylbase DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HEY9359126.1"
                     /translation="MPKPRLLRRSFFTRSVHVVAPDLIGATLLFKGIGGIIVEVEAYH
                     HTDPAAHSFGGQTARNTVMFGPPGYAYVYRSYGIHWCLNFVCEAEGSASAVLIRALAP
                     THGLAAMRRRRGVTDEQLLCSGPGRLCQALGITDAQYGLALDQPPFEIFARGEGIDVD
                     VGPRIGLTKAVDHPWRYGLKGSRFLSKPFKR"
BASE COUNT          385 a          682 c          694 g          413 t
ORIGIN      
        1 ccgatggtga tcaactcgct gccgctcttg ttccttccgc cgctgatgcg gtttcggcgg
       61 tcgccgccaa tctcgtagtc cgaccatggc caatctcaag ctaacgctcg cctgctggga
      121 ttatgaccgc acgcggccgc tgatcgatgg gcgggtcaag cctgagggca tcgacttcga
      181 catcgagatt ctgcgcccgc gccacgcgtt ccagcgcatg ctggacaaca aggaattcga
      241 cgtcagcgag ctctcgctcg cttcctacac ggcgctcaaa ggccgcggcg cttgtccgtt
      301 cgttgccgtg ccggtcgcgc tgtcgaaaat gttccgccat tcctgcattt acgtgcgcac
      361 cggcgcgggc atcgtcacgc cacaggattt gaagggcaaa cgcgtcggca cctcgcaatg
      421 gagttcgacc ggcctcgtgt tcatgcgcgg catgttgcag cacgattacg gcgtcaagcc
      481 gcaggacatg cactggttca tgggcggcct caacaccttc gtcgaaccgc cgctgattgc
      541 gctcgatctg cccaaggaca tcagactcga ttttctctcc ggcgcgcaga cgctcgagca
      601 gatgttcgcg gctggcgagc tcgacgcgct gctgtcgctc tatattccga agctctttct
      661 tgaaggctcg ccgacgatcg cgcggctgtt tgcgaactac aaggaggtcg aaggcgacta
      721 ttaccgtcgc acccggatcc tgccgatcat gcacacggtg ctgctgcgcg aggacgtcta
      781 tcgtcagcac ccgtgggcgg cacgcagcat ctaccgcgcg ttcgcagaag cgcgcgacct
      841 cgcggtcggc ggcctctacg ataccgatgc gctgcgagtc gcgttgccct ggctgatcga
      901 ccatgtcgag gaggcgcggc gcgtattcgg cgccgacttc tgggcctacg gccttgagcc
      961 gaaccgtccc gcctttgggg cgatcggccg ctacgtccac gagcagggcc tctcgccgcg
     1021 cgtcgtgagc gcagacgagc tgttcgcacc cggggtggag tgagccgctc tttgtcagct
     1081 catgctgcca tcaacccggg tggagcattc atatcgaatt tatgtattga ctacaaattg
     1141 cgtctatgct acgcattcgc agcctttgtc ctgcggcagc ggctcgtaac cgcttgtccc
     1201 gggaggcaaa aacccgggca caaaaacgcg ccgcgggaac gaataaggct gggctgtttg
     1261 acattgtgag ccgtggagca cgttgcgcgt cctcatcctg gggagcgcac atgcgagatc
     1321 gtgccgccaa cgcgaacgtg cgtacgcgtg tctcgaagga tgaggccggt gcacttgccc
     1381 gcggtgaaga gccaacctgc acgtgtgctc aggtgcggtc cattgttttg ggattgttat
     1441 ttacaatgaa aataccaact caaagttgcg agccgcccgg cggcgtggag gatcaccgct
     1501 tgaatggctt gctgagaaag cgcgagcctt tgaggccgta gcgccaggga tggtcgaccg
     1561 ccttggtgag cccgatgcgc ggcccgacgt cgacatcgat gccctcgccg cgcgcgaaaa
     1621 tctcgaatgg cggctgatcc agcgcaagcc cgtattgcgc atcggtgatg ccgagcgcct
     1681 ggcacaaccg tcccggcccc gagcacagca gctgctcgtc ggtgacgccg cggcgccggc
     1741 gcattgcggc aagtccatgc gtgggcgcca acgcacggat cagcaccgcg ctggcgcttc
     1801 cttctgcctc gcacacgaag ttgaggcacc agtggatgcc gtaggagcga tagacgtagg
     1861 catagcccgg tgggccgaac atcaccgtat tgcgtgcggt ctgcccgccg aaggaatgcg
     1921 ccgccgggtc ggtgtgatgg taggcctcga cctcgacgat gatgccgccg atgcctttga
     1981 acagcagcgt cgcgccgatg agatcggggg cgacgacgtg cacgctgcgg gtgaagaagc
     2041 ttcggcggag caggcggggc ttgggcatcg acgcgtctcg accggaaacg gcgcaggcgg
     2101 caaagcggaa cggttaagtt gaatcgtcat gcccgcgaca gaagcgcgtt cacgcgcgtc
     2161 ttccgacgcg ctta
//
LOCUS       DATCWM010000095         3451 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_286943, whole genome shotgun sequence.
ACCESSION   DATCWM010000095 DATCWM010000000
VERSION     DATCWM010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3451)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3451)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3451
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_286943"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(63..1301)
                     /locus_tag="VIQ50_01735"
     CDS             complement(63..1301)
                     /locus_tag="VIQ50_01735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011652873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9359127.1"
                     /translation="MPELAAASSLTRHRSFMLFWCARTFTNGAYMMQGVAVGWQIYEL
                     TNDPFDLGLVGLMQFLPLVGFSIVIGQVADLFDRRFVIAISQLSKAAAALALAVGTAR
                     NALTRDAMLAILLASGTARAFEIPTIHALLPGIVPAKLLPRAIAASASAQQTAVICGP
                     SLGGLLYMLSPTGVYATCTLVFIAASALISLVHVTARNEPRKPVSLATMFAGFRYIRG
                     HPILLGAISLDLFAVLLGGVTALLPIYARDVLEAGPWALGVLRSAPAVGALATSLILA
                     RRAIGGGAGHIMFAAVGVFGLASLAFGLSTSVVLSFLALMVYGASDAISVVIRQSLVQ
                     MRTPYEMLGRVLAVNSMFTGSSGSLGEFRAGAVAAALGAVPSALIGGLGTIAVMLIWM
                     WAFPQLRRVDKLTPEAGAAP"
     gene            complement(1312..1782)
                     /locus_tag="VIQ50_01740"
     CDS             complement(1312..1782)
                     /locus_tag="VIQ50_01740"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006725 - cellular aromatic compound
                     metabolic process [Evidence IEA];
                     GO_process: GO:0019439 - aromatic compound catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic-ring-hydroxylating dioxygenase subunit
                     beta"
                     /protein_id="HEY9359128.1"
                     /translation="MNIELKLKVEDLNGRYAQAIDDGKLEAWPDFFIEHGRYRITTAE
                     NFERGLPLGMIYATSRAMLRDRVRSLREANVYEAQRYRHVIGPALLTAGEGGAVKAQT
                     SFMVARIMHSGETTLFATGCYHDHIVFDAGDARFAEKIVILDSRLIDTLLAIPL"
     gene            complement(1797..2696)
                     /locus_tag="VIQ50_01745"
     CDS             complement(1797..2696)
                     /locus_tag="VIQ50_01745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEY9359129.1"
                     /translation="MRRSIVFALAAGVSIGLATRAESQGLEGTLKKVRESGAITIGHR
                     DSSIPLSYLDDKLQPVGFSIELCKHVVEAVKAKLGLANLNVKYNPVTSATRIPLVANG
                     TVDIECGSTANMSSRQKQVGFSYTFFVPQFKWIARANRDIKSADDLRGKTVAVTAGTN
                     TALFVNKMNNEEKLGMTIMQGKDHAESFLLVETGRAGAWMEDDILIAGFRANAKNPAD
                     FMLLEKAYPSDPYALMLRKDDRQFKTLVDATLAELMRSGEFEKLYTRWFERPIPPRDI
                     NIQLPMSDALKRNVKEPNDRPNS"
     gene            complement(2734..>3451)
                     /locus_tag="VIQ50_01750"
     CDS             complement(2734..>3451)
                     /locus_tag="VIQ50_01750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018097983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEY9359130.1"
                     /translation="ETVVGATMGAVPAVPGYFQRVREICDRHGILLILDEVMCGMGRT
                     GTLHACEQEGVSPDLMAIAKGLGGGYAPIGALLLQEKIFQALAQGSGAFQHTHTYMGH
                     PLACAAALAVQRVIRRDDLLGNVRAQGAHLSRRLKQRFGNHPFVGDVRGRGLLQGLEL
                     VADRGSKEPCDPKLKLHARVKGEAMARGLMVYPMGGTVDGKRGDHVLLAPPFIVDAAA
                     IDTIVERLGEAIDAATAAIG"
BASE COUNT          633 a         1121 c         1119 g          578 t
ORIGIN      
        1 ttgggcgggc gcgcttgggc aggcgcggaa cgagcgcacc ttaatcggtc ccaatgtcgc
       61 ggtcacggcg ccgctcctgc ctccggcgtc aatttgtcga cgcggcgaag ttgcgggaat
      121 gcccacatcc agatcagcat caccgcgatc gtgcccaagc cgccgatcag cgccgacggc
      181 accgcgccca gcgccgccgc gacggcgccg gcgcgaaatt cgccgagcga gcccgaggaa
      241 cccgtgaaca tcgagttgac cgccagcacc cggcccagca tctcgtaggg ggtgcgcatc
      301 tgcaccagcg attgccggat gacgacgctg atcgcatcgg aggcgccgta gaccatcagc
      361 gcgagaaacg aaagcacgac cgaggttgac agcccgaagg cgaggctggc gagcccgaac
      421 actccgaccg cggcaaacat gatgtggccg gcgcccccgc cgatcgcgcg ccgcgccaga
      481 atgagcgagg tggcgagcgc cccgaccgcc ggcgccgagc gcaacacccc gagcgcccac
      541 ggtcccgcct caaggacatc gcgggcatag atcggcaaca gcgcggtcac gccgccgagc
      601 aacacggcaa acaggtcgag cgagatcgcg cccagcagga tcggatggcc gcggatgtag
      661 cgaaagccgg caaacatcgt cgccagactg accggcttgc gcggttcgtt gcgcgccgtg
      721 acgtgcacga ggctgatcag cgcgctcgcc gcgatgaaaa ccagcgtgca ggtcgcgtac
      781 acgccggtcg ggctgagcat atagaggagt ccgccgagcg atggtccgca gatgacggcg
      841 gtctgctgcg cgctcgccga ggcggcgatc gcacgcggca acagctttgc cggtacgatg
      901 ccgggcagca gcgcgtggat cgtcggtatc tcgaaggccc gggccgtgcc cgacgcgagc
      961 aaaatcgcca gcatggcgtc gcgggtgagc gcgttgcgcg cggtgccgac ggcaagcgcg
     1021 agcgccgcag ccgccttgct cagctggctg atggcgatga cgaaccgacg gtcgaacaga
     1081 tcggcgacct ggccgatgac gatcgagaat cccaccaacg gcaggaattg catcagcccg
     1141 accaggccga gatcgaaggg atcgttggtg agctcgtaga tctgccaacc caccgcgacg
     1201 ccttgcatca tgtaggcgcc gttggtgaag gtgcgcgcgc accagaacag catgaacgag
     1261 cggtggcgcg tcagcgacga ggcggcggca agctcgggca tacgtgcaag actacagcgg
     1321 aatggcgagg agcgtgtcga tcagccggct gtcgagaatg acgatcttct cggcgaaacg
     1381 cgcatcgccc gcatcgaaca cgatgtggtc gtggtagcag ccggtggcga acagcgtggt
     1441 ctcgccgctg tgcatgatgc gcgcaaccat gaaactcgtc tgcgccttga ccgcgccgcc
     1501 ctccccggcc gtgaggagcg cgggcccgat cacgtggcgg tagcgctgcg cttcgtagac
     1561 gttggcctcg cgcagcgagc gcacccggtc gcgcagcatc gcccgcgatg tggcgtaaat
     1621 catgccgagc ggcagcccgc gctcgaaatt ctccgccgtg gtaatgcggt agcggccatg
     1681 ctcgatgaaa aaatccggcc acgcctcgag cttgccgtcg tcgatcgcct gagcatagcg
     1741 gccgttgaga tcctccacct tgagcttgag ctcgatattc atgacgaggc ggacggctac
     1801 gaattcggcc tgtcgttcgg ctcctttacg ttgcgtttga gggcatccga catcggcagc
     1861 tggatgttga tgtccctggg cgggatcggc cgctcgaacc agcgcgtata gagtttctcg
     1921 aattcgccgg agcgcatcag ctcggcaagc gtcgcatcga ccaatgtctt gaattgccga
     1981 tcgtcctttc gcagcatcaa tgcataagga tcggatggat aagctttttc gagcagcatg
     2041 aaatccgcag gatttttcgc attcgcccgg aagccggcga tcaggatgtc gtcttccatc
     2101 catgcgccgg cgcggccggt ctcgaccagc aggaaggatt cggcatgatc cttgccctgc
     2161 atgatggtca tcccaagctt ctcttcattg ttcatcttgt tgacgaacag cgccgtgttg
     2221 gtgccggcgg tcacggcgac ggtcttgccg cgcaaatcgt ccgcgctctt gatgtccctg
     2281 ttggcacggg cgatccattt gaattgcgga acgaagaacg tgtaggaaaa tccgacctgc
     2341 ttttgtcgac tgctcatatt ggcggtcgag ccgcactcga tgtcgacagt gccgttggcg
     2401 accagcggga tgcgggtggc ggacgtcacc gggttgtact tgacgttgag attcgccaga
     2461 ccgagcttcg ccttcaccgc ctccacgaca tgcttgcata gttcgatcga gaacccgacc
     2521 ggctgcagct tgtcgtcgag ataggacaag ggaatcgaac tgtcgcgatg accgatcgtg
     2581 atggccccgc tctcccgcac ctttttcagc gtgccctcga ggccttggct ctcggcccgc
     2641 gtcgctaggc cgatcgacac acccgccgct agtgcgaata cgattgatcg cctcatgagc
     2701 gtcctcctgc agcatttcgt agacatgcgc ggctcacccg attgctgccg tcgccgcgtc
     2761 gatcgcctcg ccgagccgtt ccacgatcgt gtcgattgcg gcggcatcga cgatgaaggg
     2821 aggcgcaagc aggacgtggt cgccgcgctt gccgtcgacc gtcccgccca tgggatagac
     2881 catcagcccg cgggccatgg cttcgccctt gacgcgcgca tgcagcttga gtttcgggtc
     2941 gcacggctcc ttgctgccgc gatcggcgac gagttctagt ccttgcagga ggccgcggcc
     3001 gcgcacgtcg ccgacgaagg gatgattgcc gaagcgctgc ttcaaccggc gcgaaagatg
     3061 cgcgccctgc gcccgcacat tgcccaagag atcgtcgcgg cgtatcaccc gctgcacggc
     3121 caaagcggcg gcgcaagcga gcggatgacc catatacgtg tgcgtgtgct ggaaggcacc
     3181 ggagccctgc gcgagggctt ggaaaatctt ttcctgcagc aacagcgcgc cgatcggcgc
     3241 gtacccgccg ccgaggccct tcgcgatcgc catcagatcg gggctcactc cctcctgctc
     3301 gcaggcgtgc agcgtgccgg tgcggcccat gccgcacatc acctcatcga gaatgagcag
     3361 gatgccatgc cggtcgcaga tctcccgcac gcgctggaaa tagccgggta ccgcgggaac
     3421 cgcacccatg gtggcgccga ccacggtctc g
//
LOCUS       DATCWM010000096         3099 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_443463, whole genome shotgun sequence.
ACCESSION   DATCWM010000096 DATCWM010000000
VERSION     DATCWM010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3099
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_443463"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2564
                     /gene="dnaE"
                     /locus_tag="VIQ50_01755"
     CDS             <1..2564
                     /gene="dnaE"
                     /locus_tag="VIQ50_01755"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008131047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEY9359131.1"
                     /translation="AADEAAELRRRAEAGLEHRMRVHGIAPGHSVEEYRERLAFELNV
                     IEGMKYPGYFLIVSDFIQWAKAQGIPVGPGRGSGAGSLVSYALTITDLDPIRFGLLFE
                     RFLNPERVSMPDFDIDFCQERRDEVISYVQERYGRARVAQIITFGTLQARGVLRDVGR
                     VLQMPYGQVDKLCKLVPQNPLNPVTLKRAIDDEPRLQAARDGDPLVARAFDIAQKLEG
                     LHRHASTHAAGIVIGERSLTEMVPLYRDPKSNMPVTQFNMKWVEQAGLVKFDFLGLKT
                     LTVLEKAAALLRKRGVEIDLAAIPLDDEKTYAMLARAEAVGIFQLESQGMRRALLDMR
                     PDRFEDIIALVALYRPGPMANIPTYCARKHRVEQPDYIHPKLEPVLRETFGVIVYQEQ
                     VMQAAQILAGYSLGEADLLRRAMGKKIRSEMQKQRSRFVSGCVERGMDQGQAEAIFEL
                     LARFADYGFNKSHAAAYALVAYQTAFMKANYPVEFLAASMTLDMGNTDKLSEFRAEAE
                     RLGVKVEPPSVNHSGIDFEVEGSTIHYALAALKGVGRQAVEAILHARGERPLVDLSDF
                     AARIYPHAINKRVLESLAAAGAFDALDANRARVFAAVDAMLASAQRAHDDLSVGQSEL
                     FGGGAARPPLAIGQIEPWLPAERLQKEFGAIGFFLSGHPLDDYAAVLKRMRVQSWAEF
                     ARAVRGGASAGRVAGTVVARTERRTRTGSKMGITELSDPSGHYEAVVFSEGLAQFRDL
                     LEPGAAVLLMLSAELQGDDVRAHIQMVEPLDQAAAKLAKGLRVFLRDEAPIESVAKWL
                     EGPVRAASDNGEVALVLMLGEGTEVEVKLPGRFKVSPQIAGAIKAVPGVVAVEAV"
     gene            2721..>3099
                     /gene="rpsB"
                     /locus_tag="VIQ50_01760"
     CDS             2721..>3099
                     /gene="rpsB"
                     /locus_tag="VIQ50_01760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HEY9359132.1"
                     /translation="MSLPDFSMRQLLEAGVHFGHQAHRWNPKMSEYIFGTRNNIHIID
                     LAQSVPMLHRALQAVSDTVANGGRILFVGTKRQAQDAIAEAAKKSAQYYVNSRWLGGT
                     LTNWKTISQSISRLRKLEEMLSSG"
BASE COUNT          542 a         1019 c          992 g          546 t
ORIGIN      
        1 ccgcagccga cgaggcagcc gaattgcgcc ggcgcgccga ggccgggctc gaacaccgca
       61 tgcgggtcca cggcatcgcc cccggccata gcgtcgagga gtatcgcgag cgcctcgcct
      121 tcgagctcaa cgtcatcgaa ggaatgaagt accccggcta tttcctcatc gtctccgatt
      181 tcatccagtg ggcgaaagcg caaggcattc cggtcgggcc gggtcgcggc tcgggcgcgg
      241 gctcgctcgt ctcctacgcg ctcaccatca ccgatctcga tccaattcgg ttcggcctcc
      301 tgttcgagcg cttcctcaat cccgaacgcg tgtcgatgcc ggatttcgac atcgacttct
      361 gccaggagcg gcgcgatgag gtcatcagct acgtgcagga gcgctacggg cgcgctcgcg
      421 tagcgcagat catcaccttc ggcaccttgc aggcgcgcgg cgtgctgcgc gacgtcggcc
      481 gcgtgctgca gatgccgtac gggcaagtcg acaaactatg caaactcgtg ccgcagaacc
      541 cgctcaaccc cgtcacgctg aagcgggcga tcgatgacga gccgcgcctg caggcggcgc
      601 gcgacggtga tcccttagtc gcgcgtgcgt tcgatattgc gcaaaagctc gaagggctgc
      661 accgtcacgc ctcgacgcat gccgccggca tcgttatcgg cgagcggtcg ctcaccgaga
      721 tggtgccgct ctatcgcgat cccaaatcca acatgccggt gacccaattc aacatgaaat
      781 gggtcgagca ggcgggcctg gtaaagttcg acttcctcgg cctcaagacg ctgaccgtcc
      841 tggaaaaggc ggcggcgctc ctacgcaagc gcggcgtcga gatcgacctg gcggcgatcc
      901 cgctcgatga cgagaagacc tacgccatgc tcgcgcgcgc cgaggcggtg ggcatcttcc
      961 agttggaaag ccagggcatg cggcgcgcgc tgctcgacat gcggccggac cgcttcgagg
     1021 acatcatcgc actggtcgcg ctctatcgtc ccggcccgat ggccaacatc ccgacctatt
     1081 gcgcgcgcaa gcatcgcgtg gagcagcccg actacatcca tcccaagctc gagccagtcc
     1141 tgcgcgagac cttcggcgtc atcgtctacc aggagcaggt gatgcaggcg gcgcaaatcc
     1201 tcgccggcta ttcgctcggg gaagccgacc tgctgcggcg cgccatggga aaaaagattc
     1261 gcagcgaaat gcagaagcag cgcagccgct tcgtatccgg ctgcgtcgag cgcggcatgg
     1321 accagggcca agccgaagcg atcttcgaat tgctcgcgcg tttcgccgat tacggcttca
     1381 acaagagcca cgccgccgct tatgcgctgg tcgcctatca gaccgctttc atgaaagcga
     1441 attacccggt cgagtttctc gcggcgtcca tgacgctcga catgggcaat accgacaagc
     1501 tttcggagtt tcgcgctgag gccgagcggc tgggcgtgaa ggtcgagccg ccatcggtca
     1561 atcactccgg catcgatttc gaggtggagg gttcgaccat ccactacgcg ctcgccgcgc
     1621 tcaaaggcgt cggccgccag gcggtcgagg ccattctcca tgcccgcggc gagcggccgt
     1681 tagtcgattt gtccgatttc gcggcgcgca tctacccgca cgcgatcaac aagcgggtgc
     1741 ttgaaagcct tgccgctgcc ggcgccttcg atgccctcga cgcaaaccgt gcgcgcgtct
     1801 tcgccgccgt cgatgcgatg cttgcgagcg cgcagcgcgc ccatgacgat ctttcggtcg
     1861 gccagtcgga gctgttcggc ggcggtgccg cgcgcccccc gcttgcgatc ggccaaatcg
     1921 agccatggct tcctgcagag cggctacaga aagagttcgg cgcgatcggc ttctttctct
     1981 ccggccatcc gctggacgac tatgccgccg ttctcaaacg catgcgggtg cagtcttggg
     2041 ccgagtttgc gcgcgcggtg cgcggcggcg ccagcgccgg ccgggtcgcc ggtaccgtgg
     2101 tggcacgcac ggagcggcgc acgcgcaccg gaagcaagat ggggatcacc gaactgtcgg
     2161 atccaagcgg gcactacgag gcagtcgtgt tctcggaagg gctggcgcaa ttccgcgacc
     2221 tgctcgagcc cggcgccgcg gtgttgctga tgctttcggc ggaactgcag ggggatgacg
     2281 tgcgcgcgca tatccagatg gtcgagccgc tcgatcaggc ggcggccaag ctggccaagg
     2341 gcttgcgcgt tttcctgcgc gacgaggcgc cgatcgagag cgtcgccaag tggctcgaag
     2401 ggccggttcg cgcggcgagc gacaacggcg aggtcgccct ggtactcatg ctgggcgagg
     2461 ggaccgaggt cgaggtgaag cttcccggcc gcttcaaggt ctcgccccag atcgccggcg
     2521 ccatcaaggc ggtgccgggc gtagtcgcgg tggaggcggt gtaatcggcc tgctcgatcc
     2581 ttgcgcccgc tggttcatcc ctatataagc cccgtcatct cacacgcgga ccttggcctt
     2641 acagccgtcc ggtggctcgc tccgaccgca aagggaggat gagctcacgg gtccgcggcg
     2701 gctcaaccgg agaatagacc atgtcgcttc ctgacttttc catgcgccag ctgttggagg
     2761 ctggcgttca tttcggccat caggctcacc gctggaatcc gaagatgtct gaatacatct
     2821 tcggtacccg caacaacatc cacatcatcg atctcgccca atccgttccg atgctgcacc
     2881 gcgcgctgca ggcggtgagc gacactgttg ccaatggcgg gcgtatcctc ttcgttggca
     2941 ccaagcggca agcgcaggat gccattgccg aggcggccaa aaagtcggca cagtattacg
     3001 tcaattcgcg ctggctcggc ggcacgctca ccaactggaa gaccatctcg caatcgattt
     3061 cgcggctgcg caagctcgag gagatgctgt cttcgggag
//
LOCUS       DATCWM010000097         7294 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_92474, whole genome shotgun sequence.
ACCESSION   DATCWM010000097 DATCWM010000000
VERSION     DATCWM010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7294
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92474"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..233)
                     /locus_tag="VIQ50_01765"
     CDS             complement(<1..233)
                     /locus_tag="VIQ50_01765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY9359133.1"
                     /translation="MTDASELRIRAMRPDEITIALDWAAAEGWNPGLADAPCFATVDR
                     DGFLIGELDGSAAATISCLNYDEGFAFLGFYIVR"
     gene            complement(251..2170)
                     /locus_tag="VIQ50_01770"
     CDS             complement(251..2170)
                     /locus_tag="VIQ50_01770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propionyl-CoA synthetase"
                     /protein_id="HEY9359134.1"
                     /translation="MDARSSRYYEVYARWQRDPQGFWREAARDIDWIEPPKQVFDPKA
                     GIYGRWFTGGVCNTCWNAVDRHVLKGRGEQAAIIYDSPLAGQKRTISYHRLQVETQVL
                     AAILRNLGVEKGDRVVLYMPMVPEAVIGMLACARIGAVHSVVFGGFAANELATRIDDA
                     RPRVILSASCGLEVGRLVKYKPLLDEAIRLVRHKPEACLILQRPQEEAPLVAGRDHDW
                     AKLRDEAIVFARSVYDCVPVEATDPLYILYTSGTTGRPKGVVRDNGGHMVALKWSMQN
                     FYGVEPGEVYWAASDVGWVVGHSYIVYAPLLHGCTSILYEGKPVGTPDAGAFWRVIAE
                     HGCVALFTAPTAFRAIKKEDPQGRLLAQYDLGKFRTLFLAGERADPDTVQWAEKLLKV
                     PVIDHWWQTETGWAIAGNPVGLGQLPVKYGSAAVPMPGYQVDVVDDACKPVAAKTIGS
                     IVIKLPLPPACLPTLWQQDERFKESYLAEFPGYYKTADAGFKDEDGYIHVMSRTDDII
                     NVAGHRLSTGGMEEVLSAHKDVAECAVIGVADPLKGEVPCGFIVLKTGVERPAAEIEQ
                     ECVALVRDKIGPVAAFKLAIVVARLPKTRSGKILRGTMKKIADGETWTMPATIDDPAI
                     LEEIGAALQGKGLRA"
     gene            2374..4002
                     /locus_tag="VIQ50_01775"
     CDS             2374..4002
                     /locus_tag="VIQ50_01775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase"
                     /protein_id="HEY9359135.1"
                     /translation="MTHTPYDIDLDRNAANFQPLTPLSFLERSAAVFPDHTAIIHGAL
                     RRSYAEFYARARCLASALTKRGIKRGDTVSALLANTPAMLECHYGVPMAAGVLNTINT
                     RLDAAIVAFQLDHADAKVLFVDREFSRLAKEALALAKVKPLVIDYADPEFTGAGERIG
                     ASEYEDFLAAGEADFAWKMPRDEWDAISLNYTSGTTGDPKGVVYHHRGAYLLAIGNVL
                     TGSMGKHCVYLWTLPMFHCNGWCFPWTLSVVAGTHVCLRQVRAPAMYDAISRHKVTHL
                     CGAPIVMTTLLNAQDEEKKPLPQVVEFFTAAAPPPEAVLAAMKAAGFNVTHLYGLTET
                     YGPAAVNEWRAGWDALSPAEQAAKKARQGVRYVPLEGLDVRDPDTLKPVPWDGETMGE
                     VMFRGNVVMKGYLKNKTATEKAFAGGWFHSGDLGIMHRDGYIQLKDRSKDIIISGGEN
                     ISSIEVEDALYKHPAVGAAAVVAKPDEKWGETPCAFIELKPGEAATREDLIAWCRKNL
                     AGYKCPRYVVFTELPRTSTGKIQKFKLREMAKAV"
     gene            complement(4044..5390)
                     /locus_tag="VIQ50_01780"
     CDS             complement(4044..5390)
                     /locus_tag="VIQ50_01780"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEY9359136.1"
                     /translation="MLHAPAVTPILARFAVETRWEEVPAAARQQAKRALLNFFAVALA
                     GCRSTPVEIARKSLQEFSGRDQATVIGRRERTDALSAAFLNAAAANVLDFCDTHVATV
                     IHPTFSVAAALFALSELHRVSGVELLLAFVLGVEIECRIGRAISPGHYAKGWHITSTC
                     GVFGAATAAGKLMGLDERRTSWALASAATQACGLCECLGWPAKSIGVGNSARNGLWSA
                     QLAHCGLEGPPEPIAGVQGFLSAMAEPPNWPALIEGLGETWEIEENSIKPYPCGFVIH
                     PVLDCVLDWRRDHPRESIERVIVRGHPLLSDRTDRPHVATGSESQVSVQHAVAAALVT
                     GNAGLDQFSDGCVGDPAVLAMRRKVEVIRDPKIATVAAAVELWTSDGTKHRLSTPAAR
                     GSPSNPMTDKDIEDKLRTLAAGWCAGYDADPLIEAIWALEESADVATLLAHTVPRD"
     gene            complement(5468..>7294)
                     /locus_tag="VIQ50_01785"
     CDS             complement(5468..>7294)
                     /locus_tag="VIQ50_01785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridine nucleotide-disulfide oxidoreductase"
                     /protein_id="HEY9359137.1"
                     /translation="RLPVVVIGGGLTAIDTATEALAYYPLQVEKFLNRYEMLIAERGE
                     AAVRAGWSAQEVETASEFTQHAREIRAERALAAREGRKPQLAELMRRWGGATLVYRRR
                     LIDSPSYTLNHEEVGKALEEGIAFAERLTPQEVLLDAFGCARALRLFEAQADPSGPPR
                     DVVLPARTILVAAGTQPNTVLAREEPQHVGIDGKYFQAVDENGRNVTPERVTKPSAAH
                     VLMSVDADGRAISFFGDLHPSFAGNVVKAMASAKQGYPVVSRMLARQRPSQVSPAALI
                     ARLNDELRPTVREVNRLTPAIVEVVVHAPMAARAFAPGQFYRLQNYETLSRDADGTRL
                     AKEGLALTGAAVDREGGLLSTIVLEMGGSSDLCAQLAPGEPVVLMGPTGHPTETPSGE
                     TVLLIGGGLGNAVLFSIGQALRRNGSRVLYFAGYKRAIDRYKVDEIERAADAIVWCCD
                     EPPGFRAERAQDKAFVGNIVAALDAYGSGALGKAPIALGEVDRVVAIGSDGMMAAVSR
                     ARQGMLAQHLKPGHKAIASINSPMQCMMKEICAQCLQVHRDPASGVESVVFSCFNQDQ
                     DLDRVDFDNLRARLNQNGVQEKLTRLWIDRSLRQLGLRQAAE"
BASE COUNT         1240 a         2452 c         2365 g         1237 t
ORIGIN      
        1 cgcacgatgt agaagccgag gaacgcgaat ccctcgtcgt aattgaggca ggagatggtc
       61 gcggccgccg atccatcgag ctcgccgatg agaaagccgt cacggtcgac ggtggcgaag
      121 caaggggcat cggcgaggcc cggattccag ccttcggccg ccgcccaatc cagcgcgatg
      181 gtgatctcgt ccggccgcat ggcgcgaatg cgcagctcgc ttgcgtccgt catttcggtc
      241 tgccggcctt ttatgcccga aggcctttgc cctgcaacgc ggcgccgatc tcctcgagga
      301 tcgcgggatc gtcgatcgtc gccggcatgg tccaggtctc gccgtcggcg attttcttca
      361 tggtgccccg cagaatcttt cccgaccgcg tcttcggcaa tcgcgcaact acgatcgcaa
      421 gcttgaacgc cgcgaccggg ccgatcttgt cgcgcacaag agcgacgcac tcctgttcga
      481 tctcggccgc gggccgctcg acgccggtct tgagcacgat gaagccgcag ggaacctcgc
      541 ccttgagcgg atccgcgacg ccgatcacgg cgcattcggc gacatccttg tgcgcagaga
      601 gcacttcttc catcccgccg gtggacagcc gatggccggc gacgttgatg atatcgtcgg
      661 tgcggctcat gacgtggatg tagccgtcct cgtccttgaa gccggcatca gcggttttgt
      721 agtagccggg aaactcggcg agatagctct ccttgaaacg ttcgtcctgc tgccagagcg
      781 tcggcaggca cgccggcggc agcggcagct tgatgacgat cgagccgatc gtcttagcgg
      841 caaccggctt gcaggcatcg tccacgacgt cgacttgata gccgggcatc ggcaccgccg
      901 cggagccgta cttcaccggc aactggccca agcccacggg attgcccgcg atcgcccagc
      961 cggtctcggt ctgccaccag tggtcgatca ccggcacctt gagcagcttc tccgcccact
     1021 gcaccgtgtc gggatcggcg cgctctccgg caaggaacag ggtgcggaac ttgccgagat
     1081 cgtattgcgc gagcagcctg ccctgcgggt cctccttctt gatggcgcga aacgcggtcg
     1141 gcgcggtgaa caaggcgacg cagccgtgct cggcgatcac gcgccagaac gcgccggcat
     1201 cgggcgtgcc caccggtttg ccttcgtaga ggatcgaggt gcagccgtgc aggagcggtg
     1261 cgtagacgat gtaactgtgg ccaaccaccc agccgacatc ggaggcggcc caatagacct
     1321 cgccgggctc gacgccgtag aagttctgca tcgaccattt gagcgcaacc atgtggccgc
     1381 cgttgtcgcg caccacgcct ttaggccggc cggtcgtgcc cgaggtgtag aggatgtaga
     1441 gcggatcggt cgcctcgacg ggcacacaat cgtacactga acgcgcgaac acgatcgctt
     1501 cgtcgcgcag cttggcccag tcgtggtcgc ggccggcgac gagaggtgct tcctcctgcg
     1561 ggcgctgcag gatgagacaa gcctcgggct tgtgccgaac gagccggatc gcttcgtcga
     1621 gaagcggctt gtatttgacg aggcggccca cctcgaggcc gcagctcgcg gataggatca
     1681 ctctcggcct cgcgtcgtcg atgcgggttg cgagctcgtt ggcggcgaag ccgccgaaca
     1741 ccactgagtg caccgcgccg atgcgcgcgc acgccagcat gccgatcacc gcttccggca
     1801 ccatcggcat gtagaggacg acgcggtcgc ccttctccac gccgagattg cgcaggatgg
     1861 cggcgagaac ctgcgtctcc acctgcaggc gatggtaact gatggtacgc ttttgcccgg
     1921 cgagcggaga atcgtagatg atcgccgcct gttcgccccg ccctttcagg acatgccgat
     1981 cgacggcgtt ccagcaggtg ttgcagacgc cgccggtgaa ccagcgtccg tagatgccgg
     2041 ctttagggtc gaagacctgc ttgggcggct cgatccagtc gatgtcccgc gccgcttcgc
     2101 gccagaaacc ctgcggatcg cgttgccagc gcgcatagac ctcgtaatag cggctcgagc
     2161 gggcatccat ggcgctactc cctcacaccg cctcaccacc gtccgcggcg gcgtgaggcg
     2221 acccagcccg tcccatgtca ccgccattgt gcggcgagcc gtggcgtttg caagtcgcgt
     2281 cggcggtgcc ggcgccgcca tgcgccccag caccgatttg acaccccaca cgcccgttga
     2341 aatgatacga gcgacccacc gcatgattgc gccgtgacgc acacgccgta cgacatcgat
     2401 ctcgaccgca acgcggcgaa ttttcagccg ctcacgccgc tctcgttcct ggagcgctcg
     2461 gccgcggtgt ttcccgacca caccgccatc atccatggtg cattgcgtcg cagctacgcc
     2521 gagttctacg cgcgcgcgcg gtgccttgcg tccgcgctga cgaaacgcgg gatcaagcgc
     2581 ggcgataccg tgtcggccct gctcgccaac actccggcga tgctcgaatg ccactacggc
     2641 gtgccgatgg ctgccggcgt gctcaacacc atcaacacgc ggctcgacgc cgccatcgtg
     2701 gcgttccagc tcgaccatgc cgacgccaag gtgctcttcg tcgaccgcga attttcaaga
     2761 ctagccaagg aggcgctcgc gctcgccaag gtcaagccgc tggtgatcga ctacgccgac
     2821 cccgaattca ccggtgcggg cgagcggatc ggcgcgagcg agtatgagga cttcctcgcc
     2881 gcgggagagg ccgacttcgc ctggaaaatg ccgcgtgacg agtgggacgc catttcgctc
     2941 aattacacct ccggcaccac tggcgatccc aaaggcgtgg tttatcacca ccgcggcgct
     3001 tatctgctgg cgatcggcaa cgtgctcacc ggcagcatgg gcaagcactg cgtctatctc
     3061 tggacgctgc cgatgttcca ctgcaacggc tggtgcttcc cgtggacact gtcggttgtg
     3121 gccggcacgc atgtgtgcct gcgccaggtg cgggcgccgg caatgtacga cgctatttcc
     3181 cgccacaagg tcacgcatct ctgcggcgcg ccgatcgtga tgacgacgtt gctcaacgcc
     3241 caggacgagg agaagaagcc gctgccgcaa gtggtcgagt tcttcaccgc agcggcgccg
     3301 ccgcccgaag cggtgctggc cgccatgaag gcagcggggt tcaacgtcac ccacctctac
     3361 ggcttgaccg agacctacgg ccctgccgcg gtcaacgaat ggcgcgccgg ctgggacgcg
     3421 ctatcgcccg ccgagcaggc cgcgaaaaag gcgcgccaag gcgtgcgcta cgtgccgctc
     3481 gaggggctcg acgtgcgtga ccccgacacg ctcaagccgg tgccgtggga cggcgagacc
     3541 atgggcgagg tgatgttccg cggcaatgtg gtgatgaagg gctacctcaa gaacaagacc
     3601 gcgaccgaaa aggcgttcgc cggcggctgg tttcattcgg gcgacctcgg catcatgcac
     3661 cgcgacggct acatccagct caaggatcgt tcaaaagaca tcatcatctc cggtggcgag
     3721 aacatttcct cgatcgaggt ggaggacgcg ctctacaaac accccgcggt cggggccgcc
     3781 gcggtggtag cgaagcccga cgagaaatgg ggcgagacgc cctgcgcctt cattgagctg
     3841 aagccgggcg aggcggcgac ccgggaggat ctcatcgcct ggtgccgcaa gaatctcgcc
     3901 ggctacaaat gcccgcgcta tgtcgtgttc accgagttgc cgcgcacctc gacaggcaag
     3961 atccagaaat tcaagctgcg cgaaatggcg aaggcggtgt gagcctgata gtcgcattcg
     4021 gaccgaacta atgcctgcgc cggtcagtcg cgcggcaccg tgtgcgcaag cagggtcgcg
     4081 acatccgcgc tttcctcaag cgcccagatc gcctcgatca gtggatcggc gtcgtagccg
     4141 gcgcaccagc cggcggcgag cgtacgcagt ttgtcctcga tgtctttgtc ggtcattgga
     4201 tttgacgggc ttccgcgcgc cgccggcgtc gacaagcggt gcttggttcc atcgctcgtc
     4261 cacaattcca ctgccgccgc cacggttgca attttggggt cgcggatgac ctcgaccttc
     4321 cggcgcatcg cgaggaccgc cgggtcgccg acgcagccat cgctgaactg atcgagtccg
     4381 gcgttgccgg tgacgagcgc ggccgccact gcgtgctgca cgctgacctg ggactcgctg
     4441 ccggtcgcga cgtgcggtcg gtcggtgcgg tcgctgagca ggggatgacc gcgcacgatc
     4501 acccgctcga tgctctcgcg cgggtgatcg cgccgccaat cgagcacgca gtcgagaacc
     4561 ggatgaatca cgaagccgca gggataaggc ttgattgaat tttcttcgat ttcccacgtt
     4621 tcgcccaacc cttcgatcaa ggccggccag ttgggcggct ccgccatggc gctgagaaac
     4681 ccttgcacgc cggcgatcgg ttcgggcggg ccttcgaggc cacaatgggc gagctgcgcg
     4741 gaccacagac cgttgcgcgc gctgttgccg acgccgatgc tcttggccgg ccagcccagg
     4801 cattcgcaca ggccgcacgc ctgcgtggcg gcgctcgcca gcgcccagct cgtgcgccgc
     4861 tcatcgaggc ccatgagttt gccggcggcg gttgccgcgc caaacacgcc gcaggtcgag
     4921 gtgatgtgcc aacccttggc gtaatggccg ggagagatgg cgcggcctat gcggcattcg
     4981 atctcgacgc cgagaacgaa cgccagcagc agctcgacac cgctcacgcg gtgcagctcg
     5041 gagagcgcga acaacgccgc cgccaccgaa aaggtcggat ggatgacggt cgcaacgtgt
     5101 gtgtcgcaaa aatcgagcac attggcggct gccgcgttga ggaacgcggc actcagcgcg
     5161 tcagtgcgct cgcggcggcc tatcactgtc gcctggtcgc gcccggaaaa ttcctggagc
     5221 gatttccgcg cgatctccac cggcgtgctg cgacagccgg caagcgcgac ggcaaagaaa
     5281 ttcaacaagg cacgctttgc ctgctggcgc gcggctgcgg gcacctcttc ccagcgagtt
     5341 tcgaccgcga agcgggcgag gatcggcgtg acggcggggg catgcagcat aggacatcat
     5401 atgttccggc ccgagccctt cggggcggcg cgatgaagtt tccttcacag cgctgcggcg
     5461 aggcaagcta ctccgccgct tgccgcaggc ccagctgccg caacgagcgg tcaatccaca
     5521 ggcgcgtgag cttttcctgc acgccgttct ggttgagccg agcgcgcaga ttgtcgaaat
     5581 cgacgcggtc gagatcctgg tcttgattga agcaggagaa caccacgctc tcgacgccgc
     5641 tggcgggatc gcgatggacc tgcaggcatt gcgcgcagat ttccttcatc atgcactgca
     5701 tcggcgaatt gatcgaggca atcgccttgt gtccgggctt gagatgctgc gctagcatgc
     5761 cctgccgcgc gcgcgagacc gccgccatca ttccgtcgga tccgatcgcg accacccgat
     5821 caacctcgcc gagcgcgatc ggcgccttcc ctagcgcgcc cgatccatac gcatcgagcg
     5881 cagcgacgat gttgccgacg aaggccttgt cttgcgcccg ctcggcgcga aagcccggcg
     5941 gctcgtcgca gcaccacacg atggcgtcgg ccgcgcgctc gatctcatcg accttgtagc
     6001 ggtcgatcgc acgcttgtag ccggcgaaat agagcacgcg gctgccgttc cggcgcagtg
     6061 cttgcccgat cgagaacaga acggcattgc cgaggccgcc gccgatcagc agcacggttt
     6121 cgccactggg cgtctccgtc ggatgcccgg tcgggcccat gagaacgacc ggctctcccg
     6181 gcgcaagttg cgcgcacaga tcggaggagc cgcccatttc cagcacaatg gtcgacaata
     6241 ggccgccctc gcgatcgacc gcagcgccgg tcagcgccag cccttccttc gccagccggg
     6301 tgccgtcggc atcgcgcgac agcgtctcat agttctgcag ccgatagaat tgcccgggcg
     6361 cgaaggcgcg cgcggccatg ggggcgtgca ccaccacctc gacgatcgcg ggcgtgagcc
     6421 ggttgacctc ccgcaccgtg ggccgcagct cgtcgttcag gcgcgcgatc aacgccgccg
     6481 gcgagacctg cgatggtcgc tggcgcgcca acatccggct gaccacgggg tagccttgct
     6541 tggcgcttgc catcgctttg accacattgc cggcaaagga ggggtgcaga tccccgaaaa
     6601 agctgatggc gcggccatcc gcgtcgacgc tcatcaacac atgggcggcg gacggcttgg
     6661 tgacgcgttc cggcgtgacg ttgcggccgt tctcgtcgac tgcctggaaa tacttgccat
     6721 cgatgcccac gtgctgcggc tcctcgcgcg cgagcacagt attgggctgc gtgcctgccg
     6781 cgaccagaat cgtgcgcgcc ggcaggacca cgtcgcgcgg gggaccggaa ggatcggctt
     6841 gcgcctcgaa gaggcgcagc gcgcgggcgc agccgaaggc atcgagcagg acttcttgcg
     6901 gggtcaaccg ttcggcaaag gcgatccctt cctccagcgc tttgcccacc tcctcgtggt
     6961 tgagcgtgta gctcggagaa tcgatcagac gccgccgata gacgagggtg gcgccccccc
     7021 atcggcgcat gagctcggcg agttgcggct tgcggccttc gcgcgcggcc aaggcgcgct
     7081 cggcgcgaat ctcgcgcgcg tgctgcgtga attcggatgc ggtttccacc tcctgtgcgc
     7141 tccaaccagc gcgcactgcc gcttccccgc gctcggcgat cagcatctcg tagcggttca
     7201 ggaacttctc cacttgcagc gggtaatagg cgagcgcctc ggttgcggtg tcgatcgcgg
     7261 tcagtccgcc gccgatgacc acgaccggca gccg
//
LOCUS       DATCWM010000098         2285 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_6145, whole genome shotgun sequence.
ACCESSION   DATCWM010000098 DATCWM010000000
VERSION     DATCWM010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2285)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2285)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2285
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6145"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            143..295
                     /locus_tag="VIQ50_01790"
     CDS             143..295
                     /locus_tag="VIQ50_01790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359138.1"
                     /translation="MAKDAQLDMAGFRNVLKLRAEIEGQWGGNPPPPDKYLDLSYYER
                     ALSAIH"
     gene            complement(381..1232)
                     /locus_tag="VIQ50_01795"
     CDS             complement(381..1232)
                     /locus_tag="VIQ50_01795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity EipB family protein"
                     /protein_id="HEY9359139.1"
                     /translation="MTIFGRSMLGAVLATAAVSFPFNAQRATALTPVGELASHRAVYE
                     LKLAQTRGNSPAAAARGRILYDFSGNVCDGYALHFRQVSELDNGEGKVTLSDLRSTTW
                     EDGAAKKFIFKSQNYLNEMLVDSVDGQAEREPDKVAVTLTQPAAKTFDLEAAMVFPSD
                     HMRRIIEAAREGKNILELPVYDGSEKGEKVYNTLTVIGAAIAPNERVPTDAAAREPAL
                     AALKRWPVTVSYFEKTARDDQAPVYSIRFEVYENGVSRALVLDYNDFAISGELTSIEL
                     RNSTPCK"
     gene            1390..1857
                     /locus_tag="VIQ50_01800"
     CDS             1390..1857
                     /locus_tag="VIQ50_01800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015685590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEY9359140.1"
                     /translation="MAGTVDKKLAELGIALPTPASPVANYIPFVRVGSLLFVSGQICL
                     DAAGKLVAKGKLGSGVSLEDGQKAARACAINVLAQVKAALGDLDKVKQVARLGGFINS
                     DPAFLDGPKVMNGASDLMVAVFGDKGRHARTTVGVAVLPGDAAVEVEGIFEIA"
     gene            1869..>2285
                     /locus_tag="VIQ50_01805"
     CDS             1869..>2285
                     /locus_tag="VIQ50_01805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /protein_id="HEY9359141.1"
                     /translation="MADLDWLIARPLAHRGLHGDGKSIIENTMSAFAAAIAGRYGIEC
                     DLQISGDGEAMVFHDDVLGRLTEGAGRLDAMTAAELKRVEFKGTADRMITLGELCDFA
                     AGRAALLIELKSPRARDRRLAARAAEVLSGYGGNAAV"
BASE COUNT          402 a          737 c          758 g          388 t
ORIGIN      
        1 atcagcgcgc tgatcgaggg ccgccgctgg gcgctcgatc ctgccaacag agcaagcgat
       61 tgcgctgctc ggggagcggc tcaagctcac gccgcaaatc gcggcgcaag cctatgccgt
      121 tgcgaccgat cccgccgaag gcatggccaa ggacgcacag ctcgacatgg cgggtttcag
      181 gaacgtcctc aagctgcgcg cggaaatcga gggccaatgg ggcggcaatc cgccgccgcc
      241 cgataaatac ttggacctgt cgtattacga gcgcgcgcta tcggcgatcc actgacggag
      301 caacttgtcc cgcatgcggc gcagcgcggc agcggtgcac cgctgatccg gggccgccac
      361 gaccggcaca cgagcggccg tcacttgcag ggggtgctgt tgcgcagctc gatcgaggtc
      421 agctcgccgc tgatcgcgaa gtcgttgtaa tcgagcacca gcgcacgcga gacgccgttc
      481 tcgtagactt cgaacctgat cgaatagacc ggcgcctggt catccctggc ggttttctcg
      541 aaatagctga ccgtgaccgg ccaacgcttg agcgcggcaa gcgccggctc gcgcgccgcc
      601 gcatcggtcg gcacccgctc gttcggcgcg atcgcggcgc cgatcacggt gagcgtgttg
      661 tagaccttct cgcctttctc cgacccgtcg tagacgggaa gctcgagaat attcttgccc
      721 tcgcgcgcgg cctcgataat gcgccgcatg tggtcgctgg gaaataccat cgccgcctcg
      781 aggtcgaacg tcttggcggc gggttgggtc agggtgacgg cgaccttgtc gggctcgcgc
      841 tccgcctgtc cgtcgacgga atcgaccagc atctcgttaa ggtagttctg cgatttgaag
      901 atgaacttct tcgccgcgcc atcctcccag gtggtcgagc gcaggtcact gagcgtgact
      961 ttgccttccc cgttatcgag ttccgacacc tgtcggaaat gcagcgcgta gccgtcgcag
     1021 acgttgccgg aaaaatcgta gaggatgcgc ccgcgcgcgg cggccgcggg cgaattgccg
     1081 cgtgtctgcg cgagcttgag ctcgtagacc gcgcgatggg aggccagctc gcccaccggc
     1141 gtcaaagccg ttgcacgctg cgcgttgaaa ggaaagctca cggccgccgt cgccaggaca
     1201 gcgccgagca tcgacctgcc gaagatcgtc attgccatcc gcctccgcgc cgccggcatg
     1261 cgccgcaaca taaggacgcc gttcgcctcc tgcaaccatg caatgccgga acgcggacgc
     1321 gtgccgcttg catgcgcacg cccgatcggc gaagacaagg ccttcgaccc agcgcagcag
     1381 gaggatgtca tggccggaac ggtcgacaaa aagctcgccg aactcggaat tgcgcttccc
     1441 acgccggcga gccccgtcgc caattacatt ccgttcgtgc gcgtcggctc gctgctgttc
     1501 gtttccggtc agatttgcct cgatgcagcc ggcaagctgg tcgctaaagg caagctcggc
     1561 agcggtgtat cactcgagga cggccaaaaa gcggcacgcg cctgcgcgat caacgtgctg
     1621 gcgcaggtca aggccgcgct cggcgatctc gacaaggtca agcaggtggc gcggctgggc
     1681 ggtttcatca attccgatcc ggcttttctc gatggtccga aggtgatgaa cggcgcctcc
     1741 gacctcatgg tcgcggtttt cggcgacaag gggcggcacg cccgtacgac ggtcggcgtg
     1801 gcggtgctgc caggcgacgc cgcggtcgag gtggaaggca tcttcgagat cgcctgacac
     1861 tgccgcgaat ggccgatttg gattggctga tcgcacggcc gttggcgcac cggggtctgc
     1921 acggtgatgg aaagagcatc atcgagaaca cgatgtcggc gttcgccgcc gccatcgcgg
     1981 ggcgttacgg catcgaatgc gatttgcaga tcagcggcga cggcgaagcg atggtgttcc
     2041 acgacgacgt gctgggccga ctgactgaag gagccggccg cctagacgcg atgacggccg
     2101 ccgagctcaa acgcgtcgag ttcaagggaa ccgcagaccg catgatcacg ctcggtgaat
     2161 tgtgcgactt cgcggccggc cgagcggcgc tactcatcga gttgaagagc ccgcgtgccc
     2221 gcgaccggcg gctcgccgcc cgcgctgccg aggtgctctc cggttacggc gggaacgccg
     2281 cggta
//
LOCUS       DATCWM010000099         7671 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_157348, whole genome shotgun sequence.
ACCESSION   DATCWM010000099 DATCWM010000000
VERSION     DATCWM010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7671)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7671)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7671
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_157348"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..612
                     /locus_tag="VIQ50_01810"
     CDS             <1..612
                     /locus_tag="VIQ50_01810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY9359142.1"
                     /translation="VKVTTVAGDITTAQGRSAALAACPAPDILLNNADGPLPGDFRDW
                     SRDDWIAALDAMMLSPIEMMRLTVDGMVARRFGRIINIVSRSVKMPQLELGLSNGARS
                     GLVGFVAGLARQTVAHNVTINNLLPGIFDSGAQRAHVGALVEASGKTFEELWRARAEA
                     NPARRYGRPDELGAYCAFLCSQHASFITGQNLLIDGGSYPGTH"
     gene            700..1656
                     /locus_tag="VIQ50_01815"
     CDS             700..1656
                     /locus_tag="VIQ50_01815"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9359143.1"
                     /translation="MTSALALALAAPMGAARAENYPSRTVTVVVPFPAGGSVDGVARI
                     LVQKLNETAGQHFIVENRAGGASGIVGANAVAKAAPDGYTLLLSASVHVINPFLYKNV
                     PYDVVRDFTPVALLAEGPLIVSTTPSVGADSLKDFFALVRKDPQKYTFGATTIGAASH
                     LAIELLKLDAGLDTLVVAYKGTAPALTDLMSGQIQLLADPMLSSLPLAQGGKIKALGI
                     TSLKRAAAAPDIPTVEESGMTGFAFVSWYGLWGPKNLAPDVSNRLQADVAKVLALPDV
                     KARMNGLGFEPMELGGEQFAGYVRDEMAKYEKIIKDAKISVE"
     gene            1677..4037
                     /locus_tag="VIQ50_01820"
     CDS             1677..4037
                     /locus_tag="VIQ50_01820"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEY9359144.1"
                     /translation="MSDSKSIGRSVKRLEDRPLLMGKGRFVADLAFPGMLEAAFVRSP
                     HAHAAIRGIDTHAARRCAGVHAVLTLAELAPHLAQERLPLQFRTANLPPDITPFVLAK
                     DEVAFVGEAVAVVIAQTRYIAEDAVPLVAVDYEPLPAVSDCRQALAPHAPRAHRGRDN
                     NLLIEFRQSYGDVAAAFAHAPHRVSVNLKQHRGGAHSIEGRGAVAVYDANEDRLTLWS
                     STQLAHEVRAFLMTMLRLDENQLRVVAPDVGGGFGAKFVMYPEEATLAASCLLLRRPI
                     RWIEDRREHFLAAVQEREQYWDLEVACDGDGRLLGVRGQMIHDEGAYTPQGINLPYNA
                     STALPGPYILPAFEIDVRVAETNKVATMPVRGAGYPEGAFAMERLLDRIADELHLDRA
                     DVRRRNLVPPEKMPYVSPLKTRSGAPITLDSGDFPGCQRAALEAIDYARFAERQRRAR
                     ENGRYLGIGIGNGVKGTGRGPFESGIVRIGRSGRVSVLTGAMPMGQGIKTALAQICAE
                     QFGIAPHDISVIAGDTAVIPHGQGGFASRQTVTAGSAVHLAAVKVREKALAVAAHLLE
                     ASVSDLAVRDGRIEIAGAPGSGLSLREVAEAVSGVPGYSMPGQFEPGLENMQSFLPSA
                     LTYGGGCHAVEVEVDIETCGVRILRYIVVNDSGRIINPMIVEGQLVGGAAHAIGNALY
                     EWMGYDDAAQPLTTTFADYLLPTSTEVPKIEVIFAEHPSPLNPLGVKGVGESGCVPAA
                     GAIVSAIENALAPFAVRITEYPVTPARLFALLAPDRAARAIRACRP"
     gene            complement(4015..6000)
                     /locus_tag="VIQ50_01825"
     CDS             complement(4015..6000)
                     /locus_tag="VIQ50_01825"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEY9359145.1"
                     /translation="MNFRFAEFEIDMARQELRRAGAIVHVEPQVFDLLVYLIRNRHRT
                     VSKDELFDSIWQGRVVSEATLSSRISAARRALGDSGNDQSFIRTLHKRGFRFVGDIEE
                     NSSALAPVIATGVVLDDAAHATPNLVPASPSLPLSDEPSVAYDPISGDSEQGHDAHGI
                     AIAERRGSPDRASEGAGGSIAFHGGDREVALAAEEKASSWRGTARNLLATVAAAALAT
                     LPIVAAWWLLSPPSTPHAEGRLALASDGLSMADRFKPSPPLIAVLPFANHSSDPKRDY
                     LADGITDSLISDLARALPGISIVSRDTAFTYKDRSVDGREIGRELGVRYLLEGSVVPE
                     EERVRVNTRLVETKEASQLWAERFDAELKSILQVEDEIVSRVSRAIGLQVVDLEARRS
                     LRERPDSAELIDLVLRGRAVLNLPSSRATMIEARGLFEQALKVEPASADGLAGIATTL
                     VFEYLNGYYEADGDERLGEAERLLNHALAIKPRHLMALKANAALRRAQGRFDDAIAAA
                     EAIIMENPGEPWAYKEIGLSNLYLGKAGQALDWFAKAERMGPRDPARWTWLDGRGHAL
                     LLLGRDEEAIRALISALDANPKNISSHGFLAAAYALVGRSEEAHAALAAYLERHPGTR
                     VSTFRTLSPVPLVLTGPNYRQLRAHINEGLLKAGMPE"
     gene            6268..>7671
                     /locus_tag="VIQ50_01830"
     CDS             6268..>7671
                     /locus_tag="VIQ50_01830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007591961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEY9359146.1"
                     /translation="MAIKATFSPTAHLLTEFGDTLDNTIVTSRDAAGQILVNGGAVPV
                     QGGTATVANTAQIQVFGQGGNDTITLDEANGALPAALLFGGAGNDVLTGGSGADQLFG
                     GAGNDTLLGKGGNDLLFGGAGNDTLIGGDGDDQVFGEAGNDRMIWNPGDDSDLFEGGD
                     GVDTAEVNGGNGSETFTITANGTRVRFDRTNPAPFTIDIGTTENLVVNANGGDDVITA
                     GNGLANLIKLTIDGGAGNDTITGGDGNDTLLGGDGNDVIIGGRGNDTAQLGAGDDTFV
                     WNPGDGSDVVDGQDGTDTLVFNGANVNEKISISANHGRVSLARDVGAITMNLSGVEQI
                     QLTARGGADTIAVNDLSGTGVTQVAIDLSSTPGSGVGDLAAESVTVSGTKGDDNIVVE
                     GQSGSLIIAGLPELVTISGAEATDALVVTGGAGNDTLSAATLAADTVMLTLDGGAGDD
                     TIIGSQGADLLLGGDGND"
BASE COUNT         1365 a         2546 c         2447 g         1313 t
ORIGIN      
        1 gtcaaggtca cgacggttgc cggcgacatc accaccgcgc aaggacgctc tgccgcactt
       61 gcggcctgtc ccgcgcccga tatcctgctc aacaacgccg acggccccct gcctggcgac
      121 ttccgcgatt ggtcgcggga cgattggatc gccgccctgg acgcgatgat gctttccccc
      181 atcgaaatga tgcgtctcac cgtggacggc atggtggcgc gccgcttcgg ccgtatcatc
      241 aacattgtct cgcgcagcgt gaagatgccg cagctggagc tcggcctttc caacggcgcg
      301 cgctccgggc tcgtgggctt cgtcgccgga ttggcgcgac agacggtcgc ccacaacgtc
      361 accatcaaca atctcttgcc gggaatcttc gatagcggtg cacagcgggc gcacgtcggc
      421 gcattggtgg aggcgagcgg caaaacattt gaggagctct ggcgcgcccg cgccgaggcc
      481 aatcccgcta gacgctacgg tcggccggac gagctcggtg cttactgcgc atttctctgc
      541 tcgcaacacg ccagttttat caccggccaa aatctgctga tcgatggcgg aagttatccg
      601 gggacgcact gaaccgcggc tcaaagggac cgtcccatgc gactcgtacg aactctgctt
      661 gctcgtcatt gcgaggcgga attgatgcgg atcatcataa tgacatccgc gcttgcgctg
      721 gcgctcgccg cgcccatggg cgccgcacgc gcggagaatt atccatcccg caccgtcacc
      781 gtggtggtgc cgtttccggc cggcggatcg gtcgacggcg tcgcgcgcat cctggtgcag
      841 aagctcaacg agacggcagg ccagcacttc atcgtcgaga atcgcgcagg cggcgcgtcg
      901 ggaatcgtcg gcgccaatgc cgtcgccaag gcagcgcccg acggctacac cttgctgctc
      961 tcggcgtcgg tgcacgtgat caatccgttc ctctacaaga acgttcccta tgacgtggtg
     1021 cgcgacttca cgcccgtggc gctcttggcc gagggaccgc tgatcgtcag caccactccg
     1081 agcgtcgggg cggacagtct caaggatttc ttcgcgctgg tacgcaaaga tccgcagaaa
     1141 tacaccttcg gcgcgacgac catcggcgct gccagccacc tcgccatcga gctgctcaag
     1201 ctcgacgctg gcctcgatac cttggtggtc gcgtacaagg ggacggcgcc ggcgctcacc
     1261 gacctcatga gcggacagat tcagctcctc gccgacccca tgctctcctc gctgccgctg
     1321 gcgcagggcg gcaagatcaa ggcgctcggc atcaccagcc tcaagcgcgc cgcggcggca
     1381 ccggacattc cgaccgtgga ggagtccggc atgacgggat tcgccttcgt gtcgtggtac
     1441 ggattgtggg gcccgaagaa cctagcgccc gatgtgtcca acaggctgca ggcggatgtt
     1501 gccaaggtgc tggcgctgcc ggacgtcaag gcgcgcatga acggactggg cttcgagccg
     1561 atggagttgg gcggggagca gttcgccggc tatgtgcgcg acgagatggc gaaatatgaa
     1621 aagatcatca aggacgccaa gatcagcgtg gagtgatggc gagcacgagg taaggcgtga
     1681 gcgacagcaa atctatcggc cgctccgtca agcggctgga agatcgcccg ctgctcatgg
     1741 gcaaaggccg cttcgtcgcc gatctggcgt ttcctggcat gctggaggct gcgtttgtcc
     1801 gcagcccgca cgcccacgcc gcaatccgcg gtatcgacac gcacgctgcg cgccgctgcg
     1861 ccggcgtgca tgcggtattg acgctcgccg agcttgcgcc gcatctcgcg caggagcggt
     1921 tgccgctgca gtttcgcacc gccaatctcc ctcccgacat cacgccattc gtgcttgcca
     1981 aggacgaagt ggccttcgtc ggagaagccg tggcggtggt gatcgcgcaa acgcgttaca
     2041 tcgctgaaga cgccgtgccc ttggtcgcag tcgactacga gccgctgccc gcggtgtccg
     2101 attgccgcca ggcgcttgcg ccacacgcac cccgcgctca ccgtggacga gacaacaatc
     2161 ttctaatcga gttcagacag tcctatggcg acgtcgcggc cgcattcgcg cacgcgcctc
     2221 accgcgtcag cgtcaacctc aagcagcacc gcggcggggc gcactcgatc gaagggcgcg
     2281 gcgcggtcgc ggtctacgac gccaacgagg accggcttac gctatggtca tcgacgcagc
     2341 ttgctcacga ggtgcgcgcc ttcctcatga caatgttgcg cttggacgag aatcagctgc
     2401 gcgtggtggc tcccgatgtc ggcggaggct tcggcgccaa attcgtgatg tatccggaag
     2461 aggcgacgct cgccgcgtcg tgccttctgt tgcgccggcc gatcagatgg atcgaggacc
     2521 ggcgcgagca ttttcttgcc gctgtccagg agcgcgagca atattgggat ctcgaggtcg
     2581 cctgcgacgg tgacggccgt ctcctcggcg tgcgcggaca gatgattcac gacgaaggcg
     2641 cctacacccc gcagggcatc aatcttccct acaacgcgtc gaccgcgctg cccggcccct
     2701 acatcctgcc tgccttcgag atcgacgtgc gcgtcgccga gaccaacaag gtcgccacca
     2761 tgccggtgcg cggcgcgggt tatccggaag gcgccttcgc gatggaacgc ctgctcgacc
     2821 gcatcgcaga cgagcttcac ctcgaccgcg ccgatgtgcg ccgccgtaat ctcgtgccgc
     2881 cggaaaaaat gccctatgtc tctccgctca agacgcgctc cggcgcgccc atcactctcg
     2941 acagcggcga ctttcccggc tgccagcgcg ccgcactcga ggcgatcgat tatgccaggt
     3001 ttgccgagcg ccaacggcgc gcgcgggaga acggccgcta cctcggtatc ggcatcggca
     3061 acggcgtcaa gggcacgggc cgcggtccat tcgaatccgg catcgtgcgg atcggccgct
     3121 ccggccgcgt ctctgtcttg accggcgcga tgcccatggg tcaagggatc aagacggcgc
     3181 ttgcccaaat ctgcgccgag cagttcggga tcgcgccgca cgatatcagc gtgattgccg
     3241 gcgacaccgc cgtcattccc catggccagg gtggcttcgc cagccgtcag accgtgaccg
     3301 cgggctccgc cgtgcacctc gcggcagtca aggtccgcga gaaggcgctc gcggtcgcgg
     3361 ctcacctgtt ggaggcgagc gtgagcgacc ttgcggtgcg cgacggccgg atcgagatcg
     3421 ccggcgcgcc cggcagcggg ctttcgctgc gcgaggtggc cgaagcggta tccggcgtgc
     3481 ccgggtattc catgcccggc caattcgagc cgggactcga aaacatgcag agcttcctgc
     3541 cgagcgccct cacctatggc ggaggatgcc atgcggtcga ggtcgaggta gatatcgaga
     3601 cctgcggcgt gcgcatcctg cgctacatcg tggtcaacga cagcggccgg atcatcaatc
     3661 cgatgatcgt cgaggggcag ctcgtcggcg gtgccgcgca cgcgatcggc aacgcgctct
     3721 acgaatggat gggctacgac gatgcggcgc agcctctcac cacgaccttt gccgactatc
     3781 ttctgccgac ctcgaccgag gtgccgaaga tcgaggtgat atttgccgag catccctccc
     3841 cgctcaatcc gctcggggtc aaaggcgtcg gcgaatccgg ctgcgtgccc gccgccggtg
     3901 cgatcgtctc ggcgatcgag aacgcgcttg cgcctttcgc cgtgcggatt acggaatatc
     3961 cggttacgcc ggcgcggctg ttcgcgctgc tcgcgccgga ccgagccgca agggctattc
     4021 gggcatgccg gccttaagca gtccctcgtt gatatgagcg cgcagctggc ggtagttcgg
     4081 gccggtgagc acgagaggaa ctggtgagag cgtgcggaat gtcgacaccc gcgtgccggg
     4141 gtgcctttcc aaatacgccg cgagcgccgc gtgagcctcc tcggagcgac cgaccagcgc
     4201 gtacgccgct gccaaaaagc cgtgcgatga gatgttcttg ggattagcgt caagcgcgct
     4261 gatcagcgcg cggatggcct cctcgtcgcg cccgagaaga agaagcgcat gacctcgacc
     4321 gtctagccag gtccaccgtg cgggatcgcg tggacccatg cgctccgcct tcgcgaacca
     4381 gtccagtgct tgtcccgctt tgccgagata caagttcgac aagccgatct ctttgtaggc
     4441 ccacggctcg ccgggatttt ccatgatgat cgcttcggcc gcggcaatgg cgtcgtcgaa
     4501 tctaccttgc gcgcgccgca gcgcggcatt ggccttcaac gccatgaggt gccggggctt
     4561 gatcgcgagc gcgtgattga gtagccgctc cgcctcccca agccgctcgt cgccatcggc
     4621 ttcgtagtag ccgttgaggt attcgaagac gagcgttgtg gcgatccccg cgaggccgtc
     4681 ggcgctggcc ggctcgacct tgagcgcctg ctcgaatagg ccacgggctt ctatcatcgt
     4741 ggcgcgcgac gacggcaagt tgagcaccgc cctgccgcgc aaaacgaggt cgatgagttc
     4801 agcgctgtcc ggcctttcgc gcaagctccg ccgcgcttcg agatccacca cttgcaagcc
     4861 gatcgcgcgc gacactcggc taacgatctc gtcttcaacc tgcaggatgc tcttcaattc
     4921 cgcgtcgaaa cgctccgccc acaactggct tgcctccttg gtctcgacca gccgcgtgtt
     4981 gacgcgcacc cgctcttcct cgggcacgac gctgccctcg agcaaataac gcacccccag
     5041 ctcgcggccg atctcccgcc cgtctacgct gcggtccttg taggtgaacg cggtgtcgcg
     5101 cgagacgatc gagatccccg gcagcgcgcg cgcaagatca ctgatgagac tatcggtaat
     5161 gccgtcggct aggtaatcac gcttgggatc gctgctgtga ttggcgaacg ggaggactgc
     5221 gatcaacggc ggcgacggct tgaatcggtc cgccatcgag agaccgtcgc ttgctaacgc
     5281 aaggcgacct tccgcgtggg gtgtggaggg cggcgacaat agccaccaag cggctacgat
     5341 gggcaatgtc gcaagggcgg cggccgccac ggtggcgagc aggtttcgtg cagtgccgcg
     5401 ccaactcgat gctttctctt cggccgcgag agcaacttcg cgatcaccac cgtggaaggc
     5461 gatcgagccg ccggcgcctt cggacgcgcg atcagggctc ccccgccgct cggcgatggc
     5521 aataccgtgc gcgtcgtggc cctgctccga atcgccactt atcgggtcgt acgcaacgga
     5581 aggctcgtcg gacaggggca acgatgggct ggctggcacg aggtttggcg ttgcatgcgc
     5641 cgcatcgtcc aggacaaccc cggtggcgat cacaggagcc agcgcggagc tattctcctc
     5701 gatgtcgccg acgaaacgaa acccgcgctt gtgcaacgtg cgtatgaagc tctggtcgtt
     5761 gccgctgtcg ccgagcgcgc gccgtgccgc gctgatgcgg gagctcagcg tcgcctccga
     5821 gacgacgcgg ccctgccaaa tcgagtcgaa cagctcgtcc ttgctgacgg ttcgatgacg
     5881 gttgcgaatg agataaacaa gcaggtcgaa cacctgcggc tcgacgtgaa cgatcgcgcc
     5941 ggcgcgccgc aactcttgtc gcgccatatc gatctcgaat tcggcaaagc gaaaattcaa
     6001 ggcggcccct ctttttttgt ctcgttcgtt tcgctgctgc gcgacggctt tgtcaaatag
     6061 ccgccggcta tcgcaacggt gcactccacg cttgggaaaa tctttaggga atccccaaag
     6121 agaatccaag aagactcaag acggactgaa gctcgaggtc aagcttgtca tacggtccgc
     6181 ggctaagggt gcctcacacg ctgacgtatc cgattcgagc caagtcaggg ctcaattccg
     6241 tccacggcgc atcgtgagga gcagatcatg gctatcaaag cgacgttttc tcccaccgcc
     6301 cacttgctca ccgagttcgg tgacaccctc gataacacga tcgtgaccag ccgcgatgct
     6361 gctgggcaaa ttctcgtgaa cgggggggcc gtacccgtcc agggcggcac agccacggtc
     6421 gctaataccg ctcagatcca ggtattcggc cagggcggca acgacacgat cacgctcgac
     6481 gaagccaacg gggcgctccc cgccgccctg ctgttcggcg gcgccggcaa cgacgtgctg
     6541 actggcggct cgggcgcgga ccaactgttc ggcggcgcgg gcaacgacac cctcctcggc
     6601 aaaggcggca acgacctgct gttcggcggc gcgggcaacg acacgctgat tggcggagat
     6661 ggcgacgacc aagtgttcgg cgaagccggc aacgatcgca tgatctggaa tccgggcgac
     6721 gactccgacc tcttcgaagg cggcgacggc gtcgacacgg cggaggtcaa cggcggtaac
     6781 ggctccgaaa cctttaccat cacggccaac ggtacgcgcg tacgcttcga ccgcaccaac
     6841 cctgcgccct tcaccatcga tattggcacg accgagaatc tcgtcgtcaa cgcgaacggc
     6901 ggcgacgacg ttattaccgc cgggaacggc cttgccaatc tgatcaagct cactatcgac
     6961 ggcggcgccg gcaacgacac gatcaccggc ggcgacggaa acgacacgct gctcggcggt
     7021 gatggcaatg acgtcatcat tggcggccgc ggcaacgata cggcgcagct cggcgcaggc
     7081 gacgacacgt tcgtctggaa tcccggcgac ggctccgatg ttgtcgacgg tcaggacggc
     7141 accgatacgc tcgtcttcaa cggtgccaac gtcaacgaga agatcagcat ctcggccaac
     7201 cacgggcggg tgagcctcgc ccgcgacgtc ggcgccatca ccatgaacct cagcggcgtc
     7261 gagcagatcc agctcaccgc acggggcggt gccgacacga tcgccgtcaa cgatctctct
     7321 ggtaccggcg tgacgcaggt cgccatcgac ttgagctcga cgcccggcag cggcgtcggc
     7381 gacctcgccg cggaaagcgt gacagtcagc ggcaccaagg gcgacgacaa catcgtggta
     7441 gaggggcaga gcggctcgtt gattatcgct ggcctgccgg aacttgtgac catcagcgga
     7501 gcggaagcga ccgatgcgct cgtcgtcacc ggcggcgccg ggaacgatac gctctccgcg
     7561 gcgacgctgg ccgcagacac tgtgatgctc accctcgacg gcggcgcggg cgacgacacc
     7621 atcatcggca gtcagggcgc cgatctcttg ctcggcggcg acggcaacga c
//
LOCUS       DATCWM010000100         3380 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_76314, whole genome shotgun sequence.
ACCESSION   DATCWM010000100 DATCWM010000000
VERSION     DATCWM010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3380)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3380)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3380
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76314"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1035
                     /locus_tag="VIQ50_01835"
     CDS             <1..1035
                     /locus_tag="VIQ50_01835"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359147.1"
                     /translation="PPIEGLRLYVDRLNASGGINGKKIQLTVLDDQGEPSKAAANAKR
                     LLTQENVSLLVLSSLSSTFAPVIAETRRANVALMLMGAVCPKEVYPPADLLQFCTTAY
                     AGGYDSRATLAFIKETAKEPVRIGFAAMAIPLSRGEIDYAEEQAKAMGMTPVDKEVIP
                     PPTADYTPFATKLKDANPNWIFSWAPWVTQVKTFEALRRLGWEGDYITWAHIEAESEL
                     ARLKDAKFYVIGANSLFQDNLPIHKQIVAEAKKANIRYPAEQMTEGWIGGLVLEAVLK
                     AGGWPADAAKVRAAMENVKVDTQGLRGGPIEWSKENHFRTRQYYRVYRWDPAKSAVAV
                     TKDWVAYDVK"
     gene            1116..1988
                     /locus_tag="VIQ50_01840"
     CDS             1116..1988
                     /locus_tag="VIQ50_01840"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9359148.1"
                     /translation="MQLIANITVLAAIYALLACGYVLIYRVSRVMNMAHGELAMLGAY
                     LLYTTASLFADHPVSAIAAALVLSLTVGVLVYVALMRKMTGQMVLAAILTTIAIGILL
                     RGVIVLIWSASQQHPLQALKFSNPSIELIGGARISTCAALMVLATVAVYAALFAFLRF
                     GRWGMRLRAAGQNPLLAAQRGINLNAIYALAWALSTLTGSIAGMLIALDSGLDQTMVV
                     IGLKAFAPALVGGLDSLLGALLGAVIVAAAEVLAIHYIDPLLSDVVPFLVLIATLIVR
                     PWGLFGTREELDRV"
     gene            1981..3060
                     /locus_tag="VIQ50_01845"
     CDS             1981..3060
                     /locus_tag="VIQ50_01845"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9359149.1"
                     /translation="MSRSPRASGYFRTSYDQDLALVQTRLERTSLGVFIVALLAFPLI
                     ASPFQLDLACQVFLASIGSLSLMLLTGYAGQISLGHAGLLAAGAFTVGILFREANAPF
                     WITLPAAAAVGGLLGIIFGLPSLRLRGLYLAVSTLALHFVVIYLGGEYEARRGFSTGI
                     VIDPPKLGGVSITDARAWYFILLGAAAATLFVCLNLLRTRTGRAWRALRTRETVAEAL
                     GIGVASYKLLAFVISSAATAVAGALFAYYRGFVSVEAFSLFLTIQYLAMVIIGGMGSL
                     LGALLGAIFVTLFPYIIEVGLLALPGAQRHASLLFAMNYAAFGLVMILFLMFEPLGLV
                     GIWRRTQSYFLLWPFKHRPAAGSRG"
     gene            3057..>3380
                     /locus_tag="VIQ50_01850"
     CDS             3057..>3380
                     /locus_tag="VIQ50_01850"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY9359150.1"
                     /translation="MTAALLTLEKLEVVYHRAITAVQGITLSVDPGSIVALLGTNGAG
                     KTTTLRAISGFLGIDDARVTEGAIIFKGERIENRPPHENTRRGIVLVPERDKVFPNLT
                     VAENLA"
BASE COUNT          535 a         1122 c         1058 g          665 t
ORIGIN      
        1 ccgccgatcg agggtttgcg tctctacgtc gaccgcctca acgcctccgg cggaatcaac
       61 ggcaagaaga ttcagctgac cgtgctcgac gatcaaggcg agccatcgaa agcggcggcc
      121 aacgccaagc ggctgctcac gcaggagaac gtcagcctgc tggtgctttc gagcctctcc
      181 tcgaccttcg cgccggtgat cgccgaaacg aggcgcgcca acgtggcgct catgcttatg
      241 ggcgcggtct gcccgaagga ggtctacccg ccggccgatc tgctgcagtt ctgcaccact
      301 gcttacgccg gcggctacga cagccgcgcg acgctcgcgt tcatcaagga gacggcgaaa
      361 gagcccgtgc gcatcggatt tgcggcgatg gcgattccgc tctcgcgcgg cgagatcgac
      421 tacgcggagg agcaggccaa ggcgatgggc atgacaccgg tcgacaagga ggtgattccg
      481 ccgcccaccg ctgactacac gccgttcgcg accaagctca aggacgccaa cccgaactgg
      541 atattctcct gggcgccgtg ggtcacccag gtgaagacat tcgaagcgct gcgccgcctc
      601 ggctgggaag gcgattacat cacctgggcg cacatcgagg ccgagagcga actcgcgcgc
      661 ctcaaggacg caaaattcta tgtcatcggc gcgaattcgt tgtttcagga caacttgccc
      721 atccacaagc agatcgtagc ggaagcgaaa aaagcgaata ttcgctatcc ggccgagcag
      781 atgaccgaag gctggatcgg cggactggtg ctcgaagccg tgctcaaggc cggcggctgg
      841 ccggccgacg ccgcgaaggt tcgcgcggca atggagaacg tgaaggtcga cacgcagggc
      901 ctgcgcggcg gaccgatcga gtggagcaag gaaaaccact tccgaacgcg tcagtattac
      961 cgcgtctatc gctgggaccc cgcgaaatcg gcggttgccg tgacaaagga ttgggtggct
     1021 tacgacgtga agtgatgacg ctgcgggaag cagggacatc gcggcgctgc ctcgcgtcgc
     1081 ctgtgatcgc aattcctgcc gacgtgcact gacccttgca gctcatcgcc aacatcaccg
     1141 tactcgccgc gatttacgcg ctgctcgcct gcggctacgt gctcatttat cgcgtcagcc
     1201 gagtgatgaa catggcgcac ggcgaactcg ccatgctcgg cgcctacctc ctatacacga
     1261 ccgcctccct gttcgccgat catcccgtca gcgcgatcgc tgcggcgctg gtgctcagct
     1321 tgaccgtcgg cgtcctcgtc tacgtcgcgc tgatgcgcaa gatgaccgga cagatggtgc
     1381 ttgcggccat tcttacgacg atcgcgatcg gcatcttgtt gcggggggtc atcgtgctga
     1441 tctggtcggc gtcgcaacag cacccgctgc aggcgctcaa gttctccaat ccatccatcg
     1501 agcttatcgg cggcgctcgc atttcgactt gcgcggcatt gatggtgctc gcgacggtgg
     1561 cggtctatgc cgccctgttc gcgttcttgc gcttcggtcg ctggggcatg cgactgcggg
     1621 cggccggcca gaatccgctg ctggcggcgc agcgcggcat caatctcaac gcgatctatg
     1681 ccctcgcctg ggcgctctcg accctgaccg gatcgattgc cggcatgctg atcgcgctcg
     1741 attccggcct cgaccagacc atggtcgtga tcggcctcaa ggcgttcgcg ccggcactgg
     1801 tcgggggcct cgacagcctc ctcggcgcgc tccttggcgc ggtcatcgtc gccgcggccg
     1861 aggtgctcgc catccactat atcgatccgc tgctctccga cgtggtgccg ttcctggtgc
     1921 tcatcgccac cctgatcgtg cgcccgtggg ggctgtttgg cacgcgcgag gagctcgacc
     1981 gtgtctaggt ccccgcgcgc cagcggctac ttccgcacca gctacgacca ggacctcgcg
     2041 ctcgtgcaga ctcggctcga acgcacgagc ttgggcgtgt tcatcgtcgc gctgctggcg
     2101 tttccgctga ttgcgtctcc attccagctg gatctcgcct gccaggtgtt tctggcctca
     2161 atcggctcgc tctcgctcat gctgctgacc ggctatgccg gacagatctc gctcgggcat
     2221 gccggcctac tcgccgcggg cgcgttcacg gtgggaatcc tgttccgcga ggccaatgcg
     2281 ccgttctgga tcacgctgcc cgcggcggcg gcggtgggag ggctcctcgg catcatcttt
     2341 ggcttgccgt cgctgcgctt acgcggcctc tatctcgccg tgagcacgct cgcgctgcat
     2401 ttcgtcgtga tctatctcgg cggcgaatac gaagcgcggc gcgggttctc gaccggcatc
     2461 gtcatcgatc cgcccaaact cggcggcgtt tcgatcacgg atgcgcgggc ttggtacttc
     2521 attctgctgg gcgcggcagc ggcgacgctt ttcgtctgcc tcaatcttct gcgcacgcgc
     2581 accggccgcg cctggcgcgc gctgcgcacg cgtgagaccg tcgccgaagc gctcggcatc
     2641 ggcgttgcct cctacaagct gctggccttc gtgatcagct ctgccgcgac cgcggtcgcc
     2701 ggtgcgctgt tcgcctatta ccgcggcttc gtttccgtcg aggcgttctc gctcttcctc
     2761 accatccagt atctcgccat ggtgattatc ggcggcatgg gctcgttgct cggcgcgctg
     2821 ctcggggcaa tctttgtcac cctctttccc tatatcatcg aagtcggcct gctcgcgctg
     2881 cctggggcgc agcgccatgc cagcctgctg tttgcgatga attacgccgc tttcgggctg
     2941 gtcatgatcc tgttcctgat gttcgagccg ctcgggctcg tcggcatatg gcggcgcacg
     3001 caaagttatt ttctgttgtg gccgttcaag caccgaccgg ccgcgggatc gcgcggatga
     3061 ccgctgcact gttgacgctc gagaagctcg aagtggtgta tcaccgcgcc atcacggcgg
     3121 tgcagggcat cacgctttcg gtcgacccgg gaagcatcgt cgcactattg ggaacgaacg
     3181 gcgccggcaa aaccaccaca ttgcgggcga tctccggctt tctcggcatc gacgacgcgc
     3241 gcgtcaccga gggcgcgatc atcttcaagg gcgagcgcat cgagaatcgt ccgccgcacg
     3301 agaacacgcg gcgcgggatc gtgctggtgc ccgagcgcga taaggtattt cccaatctca
     3361 ccgtcgccga gaatctcgcc
//
LOCUS       DATCWM010000101         3396 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_6188, whole genome shotgun sequence.
ACCESSION   DATCWM010000101 DATCWM010000000
VERSION     DATCWM010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3396)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3396)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3396
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6188"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..759
                     /locus_tag="VIQ50_01855"
     CDS             <1..759
                     /locus_tag="VIQ50_01855"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY9359151.1"
                     /translation="VSLGLGAFASRQTVTAGSSVLLAARAVADKAKKLASHVLEAAEH
                     DLEIADGEVRVVGAPQLSVKLGELARILKGAPGYGFPADIEPGLDASVNWRTDALAYA
                     NACHVAEVEVDPDTGGIKLLKYVALQDSGTLINPLLVDGQVRGGVAHGIGNAVLEWMG
                     YDETGQPLTTSFADYLLPSATEVPAIATLYTETPSPLNPLGAKGAGEVSTIPAAAAVI
                     SAIEDALQPFGVRIAQTPVTPQKLVELIANGVKS"
     gene            764..2221
                     /locus_tag="VIQ50_01860"
     CDS             764..2221
                     /locus_tag="VIQ50_01860"
                     /inference="COORDINATES: protein motif:HMM:NF023222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase N-terminal
                     domain-containing protein"
                     /protein_id="HEY9359152.1"
                     /translation="MRTGPEYLRSLNDGRQVFVDGERVKDVTAHRAFREAARSIARLY
                     DIAAAPEMRERMTFRSPTTGEPVLRAYQIPHNHADLRARRLFSETWAEATFGLMGRTP
                     DHVAGFFCGYAATPSVLAAGGRHFADNVVAYYEHLRDNHLYASYAIVPPQIDRSKPAH
                     QQSDPTLYAGVVKERDDGIVISGAQQLATGGAISDVIHLSCIHPLQPGDENYANCLAV
                     PVNAPGVKLYPRRPFAMVATNAFDYPLSSRFDETDSYVVFDNVFVPWEHVFIYRNLEL
                     SRDQWWKTPSHLYGNHQAQVRYVIKLRFMIGVAQRMNEMTGNAGNPAVQIMMGELAAW
                     VSIYEHMLLAHEVSAVIDKDGVLWPSKSALYSAMALQSELNGRMLEIIRELSGAAMIT
                     LPSSLRDFESAETAGDVERYMRSASADAKSRVALMRLAWDLIGSEFGSRHQQYEKFYG
                     GASFLVKQNVYRNFDFKRAGALVDAALKLPPLDED"
     gene            complement(2255..3178)
                     /locus_tag="VIQ50_01865"
     CDS             complement(2255..3178)
                     /locus_tag="VIQ50_01865"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359153.1"
                     /translation="MKLAVPDMISNSYFPAIAAIELGCFKQEGLDVSLELIYPVDKSY
                     AALREGAVDFVGGSAHSALAAFPGWEGAKLLCAQAQGMYWFLVMHADLGANRGDLGVV
                     KGRSIGAAPWVEMGLRRLLIEAGIDLARDQVKIAPVPGAQGAGVNFGVTAAKALEERK
                     LDGFWANGMGAEVAVRRGVGTVVLDVRRGDGPKPCFNYTMASIATTDRLIERSGETAA
                     AAVRAMVKAQAALKANVARATEIGRKLFPPSEAELIAELIRRDLPYYDASISPGFVAG
                     MNQFSRDVGILKGDVPYERIVATQFSHLWEA"
BASE COUNT          593 a         1153 c         1062 g          588 t
ORIGIN      
        1 gtctcgctcg ggctcggcgc ctttgccagc cgtcaaaccg tgaccgccgg ttcgtctgtg
       61 cttcttgcgg cgcgggctgt tgccgacaag gcgaagaaac tggcgagcca tgtgctcgag
      121 gcggcggagc acgatctcga aatcgccgac ggcgaggtgc gcgtcgtcgg cgcgccgcaa
      181 ctttcggtca agctcggcga gctcgcgcgc atcctcaagg gcgcgcccgg ctatggcttt
      241 ccggcggata ttgagcccgg cctcgacgcc agcgtcaatt ggcgcaccga cgcgctcgcc
      301 tacgccaatg cctgccacgt cgccgaggtc gaggtcgatc ccgacaccgg cgggatcaag
      361 cttctcaaat acgtggcgct gcaagactcc ggaacgttga tcaaccccct cctggtcgac
      421 ggccaggtgc gtggcggcgt ggcgcacggc atcggcaatg ccgtgctgga gtggatggga
      481 tacgacgaga ccggccaacc gctcaccacg agtttcgccg attacctgtt gccgagtgcc
      541 actgaggtgc cggcgatcgc aacgctctac acagagacgc cgtccccgct caatccgctc
      601 ggcgccaaag gcgcgggtga ggtcagcacc atccccgccg cggccgcggt gatctcggcc
      661 atcgaggacg cgttgcagcc tttcggcgtg cgcattgcgc aaacgccggt cacgccgcag
      721 aagctggtcg agctcatcgc caatggcgta aagtcttagg tcgatgcgaa ccggccccga
      781 gtatcttcgc tcgctcaacg acggacggca ggtgttcgtc gacggcgaac gcgtcaagga
      841 cgtgaccgcg catcgcgcct tccgcgaggc ggcgcgctcg atcgctcggc tttacgacat
      901 cgcggccgcg cccgagatgc gcgaacgcat gacgttccgc tcgcccacga ccggcgagcc
      961 ggtgctgcgc gcctaccaga tcccgcacaa ccatgccgac ctgcgggcgc gacgcttgtt
     1021 ttccgagacc tgggcggagg cgacattcgg cttgatgggc cgcacgcccg accacgtcgc
     1081 cggctttttc tgcggctacg ccgcgacgcc gagtgtgctg gccgccgggg gtagacattt
     1141 cgctgacaac gtcgtcgctt actacgagca cctgcgcgac aatcacctct acgcctccta
     1201 cgcgatcgtc ccgccgcaga tcgaccgcag caagcccgct caccaacaga gcgacccgac
     1261 cctctatgcc ggcgtggtca aggaacgcga cgacggtatc gtcatttccg gcgcgcagca
     1321 gctcgctacc ggcggcgcga tttcagacgt catccacttg agttgcatcc acccgctgca
     1381 gccgggcgac gagaactacg ccaactgcct ggcggttccg gtcaacgcgc ccggcgtcaa
     1441 gctctatccg cggcggccgt tcgccatggt cgcgaccaac gccttcgact atccgctctc
     1501 gagccgcttc gacgagaccg acagctacgt cgtcttcgac aacgtattcg tgccgtggga
     1561 gcacgtgttc atctatcgca atctcgagct gtcccgcgac cagtggtgga agacgccgtc
     1621 gcatctctac ggcaaccatc aggcgcaagt gcgctacgtc atcaagctgc gcttcatgat
     1681 cggcgttgcc cagcgtatga acgagatgac cggcaacgcc ggaaacccgg cggtgcagat
     1741 catgatgggc gagctcgccg cctgggtctc gatctatgag cacatgctgc tcgcacatga
     1801 ggtctcggcg gtcatcgata aagacggcgt gctctggccc tctaagagcg cgctctattc
     1861 cgcgatggcg ctgcagtcgg agctcaacgg ccgcatgctg gaaatcatcc gcgagctttc
     1921 cggcgcggcc atgatcacgc tgccgtcctc gctgcgcgat ttcgaaagtg cggagaccgc
     1981 cggcgatgtt gaacgctaca tgcgctcggc ctctgccgac gcgaagagca gggtggcgct
     2041 gatgcggctc gcttgggatc tgatcggatc ggaattcggc agccgccacc agcagtacga
     2101 gaagttctac ggcggcgcct cgttcctggt gaagcagaac gtctatcgaa atttcgattt
     2161 caagcgggcg ggcgccctag tcgacgcggc gctcaagctg ccgccgctgg acgaggattg
     2221 agacaccttc cgcgaccgct cgcggcaatc accttcaggc ctcccacaaa tgcgagaact
     2281 gcgtggcgac gatgcgctca tacggcacgt cgcctttgag gatgccgacg tcgcgcgaga
     2341 attggttcat gccggccacg aagccgggcg agattgaagc gtcgtaatag ggaagatcgc
     2401 gccggatgag ctcggcgatg agctcggctt ccgacggcgg aaaaagcttg cggccgatct
     2461 cggtcgcccg cgcgacattc gccttcagcg cggcttgcgc cttcaccatg gcgcgcacgg
     2521 cggcggcggc ggtctcgcct gagcgctcga tcaggcggtc cgtcgtggcg atcgaggcca
     2581 tggtgtagtt gaagcacggc ttcggtccgt cgccgcgccg cacgtcgagc acgacggtgc
     2641 cgactccccg ccgcaccgcc acctcggcgc ccatgccgtt cgcccagaag ccgtcgagct
     2701 tgcgctcctc gagcgccttg gcggcggtga cgccaaaatt aaccccggcc ccttgcgcgc
     2761 cgggcaccgg tgcgatcttc acctgatcgc gcgcaaggtc gatgccggct tcgatgagca
     2821 ggcggcgcag ccccatctcg acccacggcg cggcgccgat gctgcgcccc ttcaccacgc
     2881 cgagatcgcc gcggttggcg ccgaggtccg cgtgcatgac cagaaaccag tacatgcctt
     2941 gggcttgcgc gcacagaagc ttggcgccct cccagcccgg aaaggccgcg agcgcggaat
     3001 gcgcggagcc gccaacgaag tcgaccgcac cctcgcgcaa tgccgcatag cttttgtcga
     3061 ccggatagat cagctccagc gagacatcga ggccttcctg tttgaagcaa ccaagctcga
     3121 tcgcggcgat cgcgggaaaa tacgagttcg agatcatgtc gggcacggcg agtttcatct
     3181 cggcatttct cctgcatcaa ctattgggga cgaatcgcga tctcaacaca gggtgaaaac
     3241 ccgcgctact cgcgctcgat tggcgtgttc atggcgacgt cgctgcgccg ctcgttgacc
     3301 aattgcttgc caagctcgaa atagtcgctt cgcgccgcca tttcggcttg gcgctccaac
     3361 tcgtgcggcc aatggccgag atcatagccg tgccac
//
LOCUS       DATCWM010000102         3301 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_443557, whole genome shotgun sequence.
ACCESSION   DATCWM010000102 DATCWM010000000
VERSION     DATCWM010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3301
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_443557"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(39..350)
                     /locus_tag="VIQ50_01870"
     CDS             complement(39..350)
                     /locus_tag="VIQ50_01870"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEY9359154.1"
                     /translation="MASANGRDCIKITPALPRSADFSFIADGRDEWGLGFLITADQVP
                     GKRSPGSLSWGGINNTYFWIDPSRGIAGVILMQYLPFADVKALAIYDAFERGGLSARE
                     R"
     gene            complement(512..1522)
                     /locus_tag="VIQ50_01875"
     CDS             complement(512..1522)
                     /locus_tag="VIQ50_01875"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359155.1"
                     /translation="MSRALIARVLAAAVIAACLQSAAAQAQERDLKFVLDFISLGRHA
                     PWYVALGKGYFKEEGLNVTIMPSKGTADAIRTVATGGAEIGFIDIPSLVASGSAGGAV
                     KIVAANYQKPPYCIFTLNPGANVTEPKQMAGLELGSSTASFVPKIWAAFMEMNKVDSK
                     TLKVVNIDAASRVPMLAAGKVQSIDQFLMSEPAIRRAVTDAKPVCLFAGDYGLEIYAN
                     SIGVAEDFLAKNPEVVKKFVRAALKGWKDALADPEEASRIETQYVKALDPQIVVEEIQ
                     ILKRIAVTPDVEAHGFGYVSPERMKNTVDFINKNIEVPGEKLTAEQIYRAGYLPEVPI
                     KP"
     gene            1732..2559
                     /locus_tag="VIQ50_01880"
     CDS             1732..2559
                     /locus_tag="VIQ50_01880"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008593481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9359156.1"
                     /translation="MAFGVIKNVRKVFQLEEIGWTALEPVVALDDATFEFEEGELVAL
                     LGPSGCGKTTLLRIVGGLIAKSAGSVAIAGREVTKPMGDYGFVFQAPSLMPWRNVLDN
                     VLFPMEILRKNDAAARRHAHELLELVGLSGFLSARPHQLSGGMQQRVALCRALVHRPR
                     LLLMDEPFGALDELTRMEMNDLLLRIRHETRASVLFVTHSISEAVYLSDKVVIFSKRP
                     ARVVKEIAIPLAYPRSQKVRFTTAFTAAERIASEALGVVAPTADEAPAHAAQEVWRQ"
     gene            2571..>3301
                     /locus_tag="VIQ50_01885"
     CDS             2571..>3301
                     /locus_tag="VIQ50_01885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008593479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9359157.1"
                     /translation="MSQFLYPLAGILLIIAVWVLACWLANIPTVVLPSPDKVLRALVL
                     RSDLLLSESWVTLRETLYGFLLALLVGLPLAVAVANSRPLNLMFYPLLIALQSVPKVA
                     LAPMILVWLGTGLESKLAIVWLVAFFPIIVDTAAGLRATPKELLELAQSLNASPLQIF
                     LKVQLPAALPFVVTGAKVAITLAVIGAVIGEFVGSSEGLGFLLLTATSQLDTPLAFAA
                     LFALSILGIFVYALVGMGERLMSSWL"
BASE COUNT          522 a         1059 c         1069 g          651 t
ORIGIN      
        1 gccggggacc gcgggctacc gtggcgcgct cctagcgctc agcgctcacg agctgatagg
       61 cccccccgct cgaacgcatc gtagatagcc aacgccttga catcggcgaa cggcaggtac
      121 tgcatcaaga tcacgcccgc aatgccgcgg ctcggatcga tccagaaata ggtgttgttg
      181 atgccgcccc agctcaggct gccaggtgag cgcttgccgg gcacttgatc ggccgtgatc
      241 aggaaaccca gaccccactc gtcgcgaccg tccgcgatga agctgaagtc ggcgctgcgc
      301 ggcagcgcgg gcgtgatctt gatgcagtcc ctgccgttcg ccgacgccaa ggcgctggct
      361 ctctacgata cgttcgagcg aggcgcctat cagctcgtga gcgctgagcg ttaggaagaa
      421 ggccggcata gcgccgctat gccggccatg acgcctgtcg gtgtgggtgc aaccgcgccg
      481 ttttggcttc gagcgacagc gcgccgatcc gttacggctt gatcgggacc tcgggaagat
      541 agccggcgcg gtagatctgc tcggcggtaa gcttttcccc cggcacctcg atgttcttgt
      601 tgatgaagtc gacggtgttc ttcatgcgct cgggtgaaac atagccgaag ccgtgcgcct
      661 ccacgtccgg cgtgacggcg atgcgcttga ggatctgaat ttcctcgacc acgatctgcg
      721 gatcgagcgc cttgacgtat tgggtctcga tgcgcgaggc ctcttcggga tcggcgagcg
      781 cgtccttcca gcccttgagc gccgcgcgca cgaatttctt cacgacctcg ggattcttgg
      841 cgagaaaatc ctccgcgacg ccgatcgagt tggcatagat ctcgaggccg taatcgccgg
      901 cgaacaggca gaccggcttg gcatcggtca ccgcgcggcg gatggccggc tcgctcatca
      961 ggaactgatc gatcgattgc accttgccgg cggcgagcat gggcacgcgc gaggcggcgt
     1021 cgatattcac gaccttcagc gtcttgctat ccaccttgtt catttccatg aatgccgccc
     1081 agatcttcgg cacgaacgat gccgtgctcg agccgagctc gaggccggcc atttgctttg
     1141 gctcggtgac gttggcgccg ggattcaagg tgaagatgca atagggtggc ttctgataat
     1201 tggcggcgac gatcttgacc gcgccgccgg cgctgcccga ggcgaccagg ctcgggatgt
     1261 cgatgaagcc gatctcggcg cctccggttg cgacggtgcg gatggcatcc gcggtgccct
     1321 tcgagggcat gatggtgacg ttcaagcctt cctctttgaa atagcccttg ccgagcgcga
     1381 cgtaccacgg cgcgtggcgg cccaggctga tgaaatcgag cacgaatttg aggtcgcgct
     1441 cctgcgcttg cgcggccgcg gactgcaggc acgcggcgat aacggcggcg gccagcacgc
     1501 gtgcgatcaa cgctcgagac atctgtccct ccctcacttg tgaaccgtcc gcgtgcaatc
     1561 gagtggcgag tgcggccgtc gcagcggcat ttgacgcccg aaacaccata agatatttca
     1621 cgtgatactc aagacgccgc tcgcagcggg tcgccgcaac cgggctccgc gtgcttcgtt
     1681 cagcgcatgc ttcgtcaagc ccgtgcgggc cggtggttag cgagctcatt gatggcgttc
     1741 ggggtcatca agaacgtgcg caaggtgttc cagctggagg agatcggctg gacggcgctc
     1801 gagcccgtcg tcgccttgga tgacgccacg tttgaattcg aggagggcga gctcgtcgcg
     1861 cttttggggc cgagcggatg cggcaaaacc acgctgctgc gcatcgtcgg cgggctgatc
     1921 gcgaaatccg ccggctcggt cgcaatcgct ggccgcgagg tcaccaagcc gatgggcgac
     1981 tacgggttcg tgtttcaggc gccgagcctg atgccctggc gcaatgtgct cgacaatgtc
     2041 ctgtttccga tggagatcct gaggaagaac gacgccgcgg cgcgccgcca cgcccacgag
     2101 cttttggagc tggtggggct gagcggattc ctttcggcgc ggccgcatca gctctccggc
     2161 ggaatgcaac agcgcgtcgc gctgtgccgc gcgctggtcc accgcccgcg gcttttgctc
     2221 atggacgagc cattcggcgc gctcgacgag ctcaccagga tggagatgaa cgatctgctg
     2281 cttcgcatcc gtcacgaaac cagggcgtcg gttctgttcg tcacgcactc gatctcggaa
     2341 gcggtctacc tctccgacaa agtcgtgatt ttcagcaagc gtccggcgcg ggtggtgaag
     2401 gagatagcga tcccgctcgc ttacccgcgc agccaaaagg ttcgcttcac gacggcgttc
     2461 accgccgccg agcggatcgc gagcgaggcg ctcggcgtcg tcgcgccgac ggcggacgag
     2521 gcgccggccc acgcggcgca agaggtatgg cgccaatgag gccccgcctc gtgtcccagt
     2581 tcctctatcc gctcgccggg attctcttga tcatcgcggt ctgggtcctc gcctgctggc
     2641 tcgccaacat tcccacggtc gtcctgccct cgccggacaa ggtgctgcgc gcgttggtcc
     2701 tccgctccga cctcttgctc agcgaaagct gggtcacgct cagggagacg ctctacggat
     2761 tcctgctggc gctgctcgtc ggacttccgc tcgcggtcgc ggtcgcgaac tcgcggccgc
     2821 tcaatctcat gttctatccg ctgctcattg cgctccaatc ggtaccgaaa gtggcgttgg
     2881 cgccgatgat cctggtttgg ctcggcacgg gtctcgaatc caagctcgcc atcgtctggc
     2941 tggttgcgtt ctttcccatc atcgtcgata ccgcggcggg actgcgggcg acgcccaagg
     3001 aactgctcga gctcgcgcag agtttgaacg cctcgccgct gcaaatcttc ctcaaggtgc
     3061 agcttccggc ggcgcttccg ttcgtggtca ccggcgccaa ggtcgccatc acgctggcgg
     3121 tcatcggggc ggtgatcggc gaattcgtgg gctcgagcga ggggctcggc tttctcttgc
     3181 tgaccgccac ctcgcagctc gacacgccgc tcgcgttcgc cgccctgttc gccttgtcca
     3241 tcctcgggat cttcgtctat gcgctggtcg gcatgggcga gcggctaatg tcgtcgtggc
     3301 t
//
LOCUS       DATCWM010000103         3102 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_54733, whole genome shotgun sequence.
ACCESSION   DATCWM010000103 DATCWM010000000
VERSION     DATCWM010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3102
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54733"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2838)
                     /locus_tag="VIQ50_01890"
     CDS             complement(<1..2838)
                     /locus_tag="VIQ50_01890"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: protein motif:HMM:NF010706.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008882 - [glutamate-ammonia-ligase]
                     adenylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamine synthetase]
                     adenylyltransferase/[glutamine
                     synthetase]-adenylyl-L-tyrosine phosphorylase"
                     /protein_id="HEY9359158.1"
                     /translation="MSRPNADVISVGTLSDASLARRIAAAPCVEAAKEAQARLADWLA
                     EIADAPTGDPLRRVIAENPALEALLTGLAGGSSYLWDLVRASPQRLLVLIEAEPERRF
                     ADILAEARRAIAATREEAETMRLLRCMKTEAALLIALADIGGVWPITRVLELQTMLAD
                     AAIGAAVDYLLLGAQRQGKLKVADPGNPAANSGYIVLAMGKMGSGELNYSSDVDLIVF
                     YDPAALVPGTEPAAFYVRLTRALVKLLQERTADGYVFRVDLRLRPDPASTQIAISTAA
                     ALDYYESRGQNWERAALIKARPCAGDLAAGEALLAALSPFIWRKYLDFAAVADVHAMK
                     RQIHVYRGHDEIAVEGHNIKLGRGGIREIEFFVQTQQLIAGGRYPELRVKATLQTLDA
                     LVGGAWIDQHVRDDLGAAYRFLRLVENRLQMVADEQTHSLPADRDDLQRFACFAGFAD
                     RDAFAQALLVHLRNVQRHYATLFENAPVGEAGRRSLLFPSEADDRETLDRLAQMGFRR
                     PLEVSALVRRWNAGSYGALKSEFARGQFAEIVPLLLEHFARSADPDAAVIAFDRFLAG
                     LHGGGRLFSLLRQNPDLIALIALVLGTAPRLADGLAQSPDIMDAVIDPSFFGALPEGG
                     ELAAALERSLRQARSYEDFLDRIRIFAQEQMFLIGTRILSGTLSAEQAGEAFARLADS
                     LIRSLQRETEEQFARLHGRVAGQQIAILALGKLGGREITASSDLDLIVVYDFDPEHPE
                     STGPRRLFGAQYFSRLTQRLISGLTAQTNHGLLYRVDMRLRPSGRSGPVATQIDGFAG
                     YQETEAWTWEHLALTRARVVSAPPEFAARVEEVIRSVLCRPRDAGMISADVLEMRNAI
                     ATERGDSDRWNLKYVAGGLIDIEFIAQYLQLIHAAQTPDILDTSTTQVLDKAWRLGLL
                     TAGDAELLRRAVRLYHDLTQILRLCLSAPFDP"
BASE COUNT          572 a         1023 c         1008 g          499 t
ORIGIN      
        1 gggatcgaac ggcgccgaaa ggcacaggcg cagaatctgc gtgagatcat gataaagccg
       61 caccgcgcgg cgcagcagtt cagcgtcccc ggccgtcagc agcccgagcc gccacgcctt
      121 gtcgagcact tgcgtggtgg aagtgtcaag aatatccggc gtctgcgccg cgtggatgag
      181 ttgcagatat tgcgcgatga actctatatc gatcagccct ccggcgacgt atttgagatt
      241 ccaccgatcg ctgtcgcctc tctccgtcgc gatggcgttg cgcatttcaa ggacatcggc
      301 ggagatcatg cccgcatcac gcggccggca tagcaccgag cggatgacct cctcgacccg
      361 cgcggcaaat tccggcggtg ccgatacgac tcgcgcgcgg gtgagcgcca ggtgttccca
      421 ggtccaagcc tccgtctcct ggtagcccgc gaaaccatcg atctgcgtcg caaccggacc
      481 cgaacggccg gagggccgca gacgcatatc gacgcggtag agcaagccgt ggttggtttg
      541 cgcggtgagc ccgctgatca gacgttgcgt cagccgcgag aaatattgcg ctccgaacag
      601 gcggcgcggg ccggtcgatt ccggatgttc cgggtcgaag tcatagacca cgatgaggtc
      661 gaggtccgag ctcgccgtta tctcgcgtcc accgagcttt ccaagcgcca aaatcgcgat
      721 ctgctggccg gcgacgcggc catgcaggcg cgcgaattgc tcctcggtct cgcgttggag
      781 cgagcggatg agcgaatccg ccaaccgggc gaaggcctca cccgcctgct cggccgacag
      841 cgtccccgac aggatgcgcg tcccgatgag gaacatttgc tcctgcgcga agatgcggat
      901 gcgatcgaga aagtcctcgt acgatctcgc ctgccgcagc gagcgctcga gggccgccgc
      961 aagctcccct ccttccggca gcgcgccaaa gaagctgggg tcgatgaccg cgtccatgat
     1021 gtccggagac tgcgccagac cgtcggcaag ccgcggcgcg gtgccgagca ccagcgcgat
     1081 cagcgcgatc aggtcgggat tctggcgcag cagcgaaaac agccgtccgc cgccgtgcaa
     1141 cccggcgaga aaccggtcga acgcaatgac cgccgcgtcc ggatccgccg agcgggcgaa
     1201 atgctccagc aacagcggca cgatttccgc gaactggccg cgcgcgaact cgcttttgag
     1261 cgcgccgtag cttccggcgt tccagcgccg caccagcgcc gacacctcga gcgggcggcg
     1321 aaaacccatt tgagcgaggc gatcgagtgt ctcgcgatcg tccgcctcgg atggaaaaag
     1381 caagctgcgg cgcccggcct cgccgaccgg cgcattctcg aacaaggtcg cataatggcg
     1441 ctgcacgttg cgcaaatgga cgagcaaagc ctgcgcgaac gcgtcacgat cggcgaagcc
     1501 ggcgaaacaa gcgaatcgct gcaggtcatc gcgatcggcc ggcaggctgt gggtctgctc
     1561 gtcggccacc atttggagac ggttctcgac gagacgcaga aaacggtaag ccgcgccgag
     1621 gtcgtcacgc acatgctggt cgatccaggc gccgccgacc agcgcgtcga gcgtctgcag
     1681 cgtcgccttg acgcgcagct cggggtagcg cccgccagcg atgagttgct gcgtctgcac
     1741 gaagaattcg atttcgcgga tgccgccacg cccgagcttg atgttgtggc cctcgaccgc
     1801 gatctcgtca tggccgcggt agacgtggat ttgacgcttc atcgcgtgca cgtcggcaac
     1861 cgccgcgaag tcgagatatt tgcgccagat gaaaggtgaa agcgcggcga gcaatgcttc
     1921 ccccgccgca aggtcgccgg cacacggccg cgccttgatc agcgcggcgc gttcccaatt
     1981 ctgtccacgg ctctcatagt agtcgagcgc cgccgcggtg gagatggcga tctgggtcga
     2041 agcaggatcg gggcgcagcc gcagatcgac gcgaaatacg tagccatcgg cggtacgctc
     2101 ctgcaacaat ttcaccagcg cgcgcgtgag ccggacgtag aaggcggcgg gctcggttcc
     2161 cggaacaagc gcggcggggt cgtaaaagac gatgagatcg acgtcgctcg aatagttgag
     2221 ctcgccagag cccatcttgc ccatggcgag cacgatgtag cccgagttcg cggccggatt
     2281 gccgggatcg gcgaccttga gctttccctg ccgttgcgcg ccgagcagga gataatccac
     2341 cgcggcgcca atggctgcgt cggcaagcat cgtctgcagc tcaagcaccc gcgttatcgg
     2401 ccaaacgccg ccgatatcgg cgagcgcgat caacagcgcc gcctcggttt tcatgcaccg
     2461 aagcaggcgc attgtctcgg cctcctcgcg tgtcgctgcg atcgcgcgcc ttgcctcggc
     2521 gagaatatcg gcgaagcggc gctccggctc tgcctcgatc aacacgagta gccgctgcgg
     2581 tgacgcgcgc accaggtccc agagatagga ggagccgcct gccagcccgg tcagcagcgc
     2641 ttcgagcgct gggttttccg cgataacccg tcgcagcggg tcgccggtgg gcgcatcggc
     2701 gatttcggcg agccagtcgg cgaggcgcgc ctgcgcctcc ttcgcggctt caacgcatgg
     2761 cgctgccgcg atccgccgcg cgagcgaagc gtcgcttaaa gtccccaccg agatcacatc
     2821 cgcgttcggc cggctcataa gcttcgtccg taccttcccg cactacaggc cggcgtcgct
     2881 gcgcaaattg cgccgccact ccggctttgt caggagtcca ccgtcaacgc cgcaacctgg
     2941 caaataggaa ccggttcggg atcacaagcg cagcaatgat ggcgatatcg tagcggctta
     3001 ggccgccgag ggaaccgacc ctgcgcgcgg cagcgatatc acagtcttaa gcccggggtt
     3061 gttgtcctcg agcttgagct caccgccgtg gaggcgggcg ac
//
LOCUS       DATCWM010000104         3337 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_168196, whole genome shotgun sequence.
ACCESSION   DATCWM010000104 DATCWM010000000
VERSION     DATCWM010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3337)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3337)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3337
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168196"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            427..3147
                     /gene="ligD"
                     /locus_tag="VIQ50_01895"
     CDS             427..3147
                     /gene="ligD"
                     /locus_tag="VIQ50_01895"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase D"
                     /protein_id="HEY9359159.1"
                     /translation="MGLQVYRRKRKFNVSPEPRGRVRRTEGHQFVIQKHAARRLHYDL
                     RLELGGVMKSWAVTRGPSLVPGEKRLAVHVEDHPIEYNAFEGTIPAGEYGGGTVMIWD
                     RGRWHPEGDPDAGYKKGHLDFTLEGKKLHGRWHLVRMHGRAGEKKEPWLLIKSKDEAA
                     RRASDPDILEEQPLSVVSGRSIPEIAEGKGRKRVWHSNRSVKENVKAGATKGHAVLPR
                     AGAPKSSQQRARTPRDRDGAKKGSKGSAGKSKDKDRRLGDAPLPDFVPPSLATLHSTA
                     PSSPGWAHEIKYDGYRMQARLDRRKVRLLTRKGLDWTEKFPNVAAAVAKLPARTALID
                     GEVVVEDEDGASSFSALQAALKQGERERFIYYVFDLLHLDGRDQTGLPMAERKAELAR
                     LLPTAESGPVIYSEHFEGDGQAVLRTACLWRLEGIVSKRLDAPYRSGRSESFIKIKCS
                     NAQELVVGGYSPSTALPRAIGALVVGYYDDGRLIYAGRVGTGYTRTLARDLWKRLHPL
                     ETSAPPFDQIPRAEARRSDVRWVEPSTVIEAQLRGWTADGLVRQAAFKGVREDKSPRE
                     VVREQAAPAAVEADGAAAPKSAAETAKTMTSTSKTKSRASPRKSPSQRLAGPSDVRFT
                     HPDRVYWADVGVTKQDLADYYRSVWDWMAPHIVSRPLALVRCPEGTSGQCFFQKHASA
                     GLTEANLRTVIDSNRRQVIAVEDLDGVLSLVQAGVLELHVRGSTLDRLDVCNRIVFDI
                     DPGEGVSWAGVVAAARDVRERLDALDLESFVKLSGGKGLHVVLPIGGADWRTTKNFAQ
                     AVALAITADAPARYVAKITKSLRRGKIFIDYLRNSLEQTSVAAYSTRARPGAAVSAPV
                     TWEELGRTKGGNQYTMLNLGKRLGGLKQDPWKDIGRLKQNLPDARTLRRR"
     gene            complement(3224..>3337)
                     /locus_tag="VIQ50_01900"
     CDS             complement(3224..>3337)
                     /locus_tag="VIQ50_01900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HEY9359160.1"
                     /translation="ALKRRCEELLRQAEARVEKITLDAAGKPTGTEPLDVT"
BASE COUNT          643 a         1026 c         1112 g          556 t
ORIGIN      
        1 gtctcctggc gcagctcgtc agccagctgg cgcagttggc cgctgtccag tcgacgcagg
       61 tcggctggcg tcttgacgag atccaggagt ggggtcttcg aaggctgatg cacggggagc
      121 tccaccgaca agggggcggt aacctaacgg gttgcccatg gtttaaccag ccaggacagc
      181 aagggcaaat ccgaaacgtt gcgaagtact taacttagct cgatttttct gcaatgctcc
      241 ggaacctgcc gcgccgccgc ggcgttgctc tcatcgccca agggtgcgag ttgcgtcatg
      301 tcagcacttg caacttggac gtacttctgc cgcaagtcgt cacccggcct gttatcagct
      361 gtcactaggc gggatcgcgt ccctttcgag cgcgccccgg caaaatgcag gcgtgtgagc
      421 tgaccggtgg gtcttcaggt atatcgcagg aaacgcaagt tcaacgtgag cccggagccg
      481 cgggggcggg tccgtcggac cgaaggacac cagttcgtaa tccaaaagca cgcggcgcgg
      541 cgtctgcatt atgacctgcg gctcgagctg ggcggggtca tgaagagttg ggccgtgact
      601 cgcggcccaa gtctcgttcc gggcgagaag cgcctggcgg tccacgtgga agaccatccc
      661 atcgaataca acgctttcga ggggaccatc ccggcaggag agtacggcgg cggcacggtc
      721 atgatttggg atcgcggccg ctggcatccg gaaggcgatc ctgacgccgg atacaagaaa
      781 ggccatctcg actttaccct cgagggcaag aagctgcacg gacgatggca tctcgtgcgg
      841 atgcacggcc gggcaggaga gaaaaaggag ccctggcttc tgatcaagtc caaggatgaa
      901 gcagcccgca gagccagcga tccggatatt ctcgaggagc agccactgtc ggtggtcagc
      961 ggccgatcaa tccccgagat cgctgaaggc aagggccgca aacgggtctg gcactcgaac
     1021 agaagcgtga aggagaacgt caaggcaggg gcgaccaaag gccatgccgt cctgccgcgt
     1081 gcgggtgcgc ccaaaagctc acaacagcgc gcgcgcacgc cgcgcgatcg ggatggagcg
     1141 aagaaaggca gcaagggcag cgccggcaag agcaaggaca aggatcggcg gctaggcgac
     1201 gcgccgctgc cggatttcgt gccgccttcg ctcgccacct tgcattcgac cgcgccgagc
     1261 agccccggct gggcgcacga gatcaagtac gacggctacc gcatgcaggc ccggctcgac
     1321 cgccgcaagg tgcgtctgct cacccgcaag ggtctcgact ggaccgaaaa attcccgaac
     1381 gtcgcggccg cggttgccaa gcttcccgcg cgcacggcgc tgattgacgg cgaggttgtc
     1441 gtcgaagatg aagacggggc ttccagtttt tcggcgctgc aggcggcgct caagcaagga
     1501 gagcgagaac gcttcatcta ctacgtattc gatcttcttc atcttgatgg ccgcgatcaa
     1561 acggggctgc ccatggccga gcgcaaagcc gaactggcgc ggctgctccc aaccgcagag
     1621 agcggaccgg tcatctacag cgaacatttt gagggtgacg gtcaggcggt tcttcgcacc
     1681 gcctgcctat ggagactcga aggaatcgtc tcgaagcgcc tggacgcgcc gtatcgcagc
     1741 gggcgctcgg agagcttcat caagatcaaa tgttccaacg cgcaggaact ggtggtcggc
     1801 ggctattcgc cgtcgaccgc cttgccgcga gcgatcggag cgctggtggt cggctattac
     1861 gatgatggcc ggctcatcta tgcgggccgg gtcggcaccg gatacacgcg cacgctcgcc
     1921 cgggacttgt ggaagcggct gcatccgctt gagacgagcg caccgccctt cgatcaaatt
     1981 ccccgcgccg aggcacggcg ctccgacgtc cgctgggtcg agccgagcac cgtgatcgaa
     2041 gcgcaactgc gtggttggac cgcagatggg ctcgtgcgtc aggcggcgtt caagggtgtg
     2101 cgtgaggaca agtcgccgcg ggaggtggtc cgcgagcagg cggcgccagc agcggtggag
     2161 gcggacggag cggccgcgcc gaagagcgca gcggagacgg caaagaccat gacgagtacc
     2221 tcgaagacga agtcgcgagc gagcccgcgc aagtcgccga gccaacgttt ggcaggtcca
     2281 agcgacgtcc gcttcaccca ccccgaccgg gtctattggg ccgacgtcgg cgtcaccaag
     2341 caagatttgg cggattacta tcgctcggtc tgggactgga tggcgccgca cattgtcagt
     2401 cggccgctcg cgctcgtacg ctgtcccgag ggcacgagcg gccagtgctt tttccaaaag
     2461 catgcttcgg ccggtctgac cgaggcaaac ctccgcaccg tcatcgattc caaccggcgg
     2521 caggtgatcg cggtcgaaga cctcgatggt gtgctttccc tggtccaggc aggcgtgctc
     2581 gaactgcatg tgcgcggatc gacactcgat cgcttggacg tttgtaaccg catcgtcttc
     2641 gatatcgatc ccggcgaggg cgtttcctgg gccggcgtgg tcgctgccgc gcgcgacgtg
     2701 cgtgagcggc tcgacgcgct ggatctggaa agtttcgtca aactctccgg cggcaagggc
     2761 ctgcacgtcg ttttgcccat cggcggcgcc gactggcgca ccacaaagaa cttcgcgcag
     2821 gcagtggcgc tcgcgatcac cgccgacgct cccgctcgat acgtcgcgaa aatcacgaaa
     2881 tcgctgcgca ggggaaagat cttcatcgat tacctgcgca attcgttgga acagacctcc
     2941 gtcgccgcat actcgacccg cgcccggccg ggagcggcgg tttcggcgcc ggtgacttgg
     3001 gaggaacttg gccgcaccaa gggcggcaac caatatacga tgctcaatct gggcaaacgc
     3061 ctcggcggcc tcaagcagga cccgtggaag gatatcggac ggctgaagca gaatttgccg
     3121 gatgcgcgga cactgcgacg ccggtaatca gccgagcaac agtcgaatgc ccgctttcgc
     3181 gggcgtgacg gggcgcggag agactgcgga gagactctaa tgcttaggtc acgtccagcg
     3241 gctcggttcc tgtcggcttg ccggcggcgt cgagcgtgat cttctccacc cgcgcctcgg
     3301 cttggcgcaa cagctcctca cagcggcgct tgagcgc
//
LOCUS       DATCWM010000105         6135 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_49479, whole genome shotgun sequence.
ACCESSION   DATCWM010000105 DATCWM010000000
VERSION     DATCWM010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6135
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49479"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..294
                     /locus_tag="VIQ50_01905"
     CDS             <1..294
                     /locus_tag="VIQ50_01905"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEY9359161.1"
                     /translation="RWRINAVTVVNNNSSGNQSKRGFDRVYGGTQTEQAREMWTFSKV
                     NFARIAEDMGALGIRVEKPSEIGPAVAQALQANRPAIIDVVTDIDALAPLAVS"
     gene            complement(533..829)
                     /locus_tag="VIQ50_01910"
     CDS             complement(533..829)
                     /locus_tag="VIQ50_01910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013420525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2293 domain-containing protein"
                     /protein_id="HEY9359162.1"
                     /translation="MAKRSDIEMALRRLAPRIPPHEFAAVVDHAVDSPGLSVAAPETA
                     AWLSLVAYVRHTFTDYDELLREDYDQESARHFVADEIAATLAGWGVRRRLSAED"
     gene            1160..2479
                     /locus_tag="VIQ50_01915"
     CDS             1160..2479
                     /locus_tag="VIQ50_01915"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HEY9359163.1"
                     /translation="MNATTNVSRATSGSAPIGMVAAVSIGVGGMVGAGIFSILGVVAH
                     AAGNAMWLAFAIGGVVALLSTYSYAKLGATFPSAGGAVHFLVKGFGDGVLAGGLNLFM
                     WAGYIISLALYATAFGGYAATFVTTAPSPVLLKSLAIAAVVLLTLVNALGPGLMGRWE
                     TVIVAVKLAILVLFAAVGLWFIRPGYLSPELWPETSSILFGAGVLFIGYEGFGLVTNA
                     AADMRDPRRLLPRALYTSVLLVIALYLAVSLTVTGNLSDFEIERTKDYALAEAAKPFL
                     GQFGFRLIAIAALFSTASAINATLFGAANVCYMIARDGGLPAGLSRTEWRGATGGLVL
                     TAALVLAVMLSFDLSGIAMMGSAAFLLIYAAVNAGHLKVLKATGASAVLVWLSLLSCL
                     AMLAVLCVYIQQEQPRALAALVVIAAASFAAEWAYRRWTGRTISEAA"
     gene            2635..2868
                     /locus_tag="VIQ50_01920"
     CDS             2635..2868
                     /locus_tag="VIQ50_01920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359164.1"
                     /translation="MSRIANLDPATAELVSAAFDKSWQFVKTDPALAHPDPQHMRARL
                     AESLARLAQDGERDMWRLANAAIGQLRRDSRAA"
     gene            complement(2962..4485)
                     /locus_tag="VIQ50_01925"
     CDS             complement(2962..4485)
                     /locus_tag="VIQ50_01925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEY9359165.1"
                     /translation="MEAFGLLLHGFHVLLTWKTLAVMMVGLVLGIFVGVLPGLGGPNG
                     VAILLPLTFTMDPTSAIVMLSCIYWGALFGGAITSILFNIPGEAWSVATTFDGYPMAQ
                     QGKAPEALTAAFTSSFIGSLAAVLLITFLAPGIAAFALQFGPPEFFAVYLLTFCSFVG
                     LGREDKHKTIISMTLGLLFAGIGMDTVSGTLRMTFGWNELLRGINFLVAVIGLFGISE
                     ILLTMEERLALRGHTASISLRVVLRVWKALPRYWVTLLRSSVIGCWLGITPGGAIAAS
                     FMGYNLAKRFSKDKDSFGKGRIEGVFAPETAAHASGTSALLPMLALGIPGSGTAAILL
                     GGLMVWGLNPGPLLFVEHKDFVWGLIASMYLGNVVGLVLVLTTVPVFAAVLRVPFSAI
                     APMIVVSCAIGAYAIQNAMFDIWLMLVFGVVGYVFKKIGIPLAPFTLALVLGNRAEDA
                     FRLAMIGAGGDLRVFWSNGLVGSITTLALILLFWPLISPLFERASRLWRPAGGSRAA"
     gene            complement(4505..5047)
                     /locus_tag="VIQ50_01930"
     CDS             complement(4505..5047)
                     /locus_tag="VIQ50_01930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HEY9359166.1"
                     /translation="MPSPEADIVVDDPTAPADNSPSVVSTRTVEIVVSVLLLALAGIF
                     CFDNWRTGIAWEADGPQPGYFPFYLGVLLAGASLYGLIATLVTRTGAARIFLTHDQLR
                     RVMQVFIPTLLFCLFTQWLGLYVASFLLIAGFMRIIGRIALWKSLLTAFLFAVIMFFT
                     FDVAFDVIMPKGPLEAAFGY"
     gene            complement(5240..>6135)
                     /locus_tag="VIQ50_01935"
     CDS             complement(5240..>6135)
                     /locus_tag="VIQ50_01935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008963551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9359167.1"
                     /translation="VVAAGAGGASDQMARMMQAAVQKNNLMKQPMVVSLKGGASGAEA
                     LIYMKSNEGDPNKVLIAYSLIYMLPLSAKIPFNWRDLTPVSVIALDEFALWVNAQEPY
                     KTVKEFVAAAKSANPPLKMGGTGSRREDHVLTVFLEKKTGAKFAYLPYKSGGEAATQL
                     VGNHTAANVNNPSENLEVWRAGQVRPLCVFDKERIEYKGKVAGDMSWNDIPTCKDEGL
                     DIQYLMLRAMFLPGKVTPEQTAFYVDLFKKLTQTTEYKDYMEKQALKPIFLTGGDMVK
                     FLEEDDALNKNLMTEAGFVAH"
BASE COUNT         1124 a         1939 c         1994 g         1078 t
ORIGIN      
        1 cgctggcgca tcaacgccgt cacggtggtc aacaacaact ccagcggcaa tcaatcgaag
       61 cggggcttcg accgcgtcta tggcggcacc caaaccgagc aggcgcggga aatgtggacc
      121 ttcagcaagg tcaacttcgc gcgcatcgcc gaggacatgg gcgcgctcgg cattcgcgtg
      181 gagaaacctt ccgagatcgg tcccgccgtc gcgcaggcgc tgcaggcgaa ccgcccggca
      241 atcatcgatg tggtcaccga catcgatgcg ctggcgccgc tggcggtgag ctgagggtgt
      301 aacgcactaa cagctcgtca tggccgggct gtccccgcac gtcgcgttta cccgacttgc
      361 ggcattttat tagcgcggag ctcgggctag cccgagcttc gatgccatcc acgtctttgc
      421 cgccgcaaga caagcaagac gtggatgccc ggcagcgcag acaagtttac gcagtcttcg
      481 caagcttgac tgcgtgccgg gcatgacgga tcagtggctg agaccgccag cctcaatcct
      541 ccgcgctcaa gcgccgccgc acgccccagc cggccagggt cgcggcgatc tcgtcggcca
      601 cgaagtgtct cgcactctcc tggtcgtagt cttcgcggag gagctcgtcg tagtcggtga
      661 aggtgtggcg cacataggcg acgagcgaca gccacgccgc ggtctccggc gccgcgacgc
      721 tcagccccgg gctgtcgacg gcgtggtcga ccaccgcggc gaactcatgc ggcggtatcc
      781 gcggcgcgag gcgccggagc gccatttcga tatcgctgcg tttggccatc tcgctttatt
      841 ttaagctcgc atcccgcagg cggactatcg ccgctcgtgc cctccccccg gcggggagag
      901 ggctgctcgc tggtgcaaga tcgggggagc gggtgagagg ggttgcatcc atcattgccg
      961 ccggtaatcc cctcacccca gccctccctc aagtggggga gggagcaaac cgcgtatgcg
     1021 gcacgtttat gcgcaccttc tgccgtgcga gcaaatgtgc cattaagagc tgcgcgaagc
     1081 cgcacgcggg gaatgaattg ccaatcggga agcagcaaac gcgacgcgct ggcgcgaaag
     1141 tcggcctgcg ggtgcaacca tgaacgccac gacgaatgtc tctcgcgcca cctcgggatc
     1201 ggcgccgatc ggtatggtgg ccgccgtctc gatcggcgtc ggcgggatgg tcggggcggg
     1261 aattttttcg atcctcggcg tcgtggcgca tgctgccggc aacgccatgt ggctggcatt
     1321 cgcgatcggc ggcgtggttg cgctgttgtc cacctattcc tatgccaagc tcggcgccac
     1381 gttcccgtcg gccggcggcg ccgtgcattt cctggtgaag ggctttggcg acggcgtgct
     1441 cgccggcggg ctcaacctgt tcatgtgggc gggctacatc atctcgctgg cgctctatgc
     1501 cacggcgttc ggcggctacg ctgccacctt cgtgaccacg gcgccgtcgc ccgtgttgct
     1561 gaaatcgctg gcgatcgccg cggtcgtgct gctgacgctg gttaatgccc tcggtccagg
     1621 cctcatgggc cgctgggaaa cggtcatcgt cgccgtgaag ctcgccatcc tcgtgctgtt
     1681 tgcggcggtg ggcttgtggt tcatccggcc tggctatctc tcgcccgagc tttggcccga
     1741 aacaagctcg atcctgttcg gagcgggcgt gctgttcatc ggctacgagg gcttcggcct
     1801 cgtgaccaac gccgccgccg acatgcgcga tcccaggagg ttgttgccgc gcgcgctcta
     1861 taccagcgtg ctgctcgtga tcgcgctcta tctcgcggtg tcgctgaccg tgactggcaa
     1921 cctctcggac tttgaaatcg agcggaccaa ggattacgcg ctcgccgagg cggcgaagcc
     1981 gttcttaggt caattcggtt tccgcctgat cgccatcgcc gccctgttct cgaccgcctc
     2041 ggcgatcaat gccacgctgt tcggcgcggc gaacgtttgc tacatgatcg cccgcgacgg
     2101 cggattgccg gccggtttgt cgcgcacgga atggcgcggg gcgaccggcg gcctcgtgct
     2161 caccgcggcg ctcgtgcttg cggtcatgct gagcttcgac ctctccggca tcgcgatgat
     2221 gggaagcgcc gccttcctct tgatctatgc cgcagtcaac gcgggccacc tcaaggtgct
     2281 caaggcgacg ggagcgagcg cagtgctcgt atggctatcc ctgctgagct gcctggcgat
     2341 gctcgccgtc ctgtgcgtct atatccagca ggagcagccc cgggcgcttg ccgcgctcgt
     2401 ggtcatcgcg gcggcctcgt tcgccgccga atgggcctac cggcgttgga ccggccgcac
     2461 gatcagcgaa gcggcatagc gatttcatct gcgcggtcgc gggacttcct cgatgtgagc
     2521 gcgagagatt gcgcggcact gcagcatatt ttggcagcgc aacatggaac tgtgcgctgg
     2581 actgccctct ctctccgtga gataggaaaa gtaagaacgt acggggagga aaaaatgagc
     2641 aggatcgcaa acctcgaccc cgccaccgcg gagctggtga gcgccgcgtt cgataagtca
     2701 tggcagttcg tcaaaactga tcctgcgctc gcgcaccctg atccgcagca tatgcgcgca
     2761 cggctcgccg agagcttggc gcgtctggcg caggacggcg agcgggatat gtggcgtctc
     2821 gccaacgccg cgattggtca attgcggcgc gacagccgcg ccgcttaact catcattcca
     2881 ctatccccgt catgcgcggg cagaagcgcg tcttccgacg cgctatgccg ggcaatgacg
     2941 ctcaccaaat gatctcagcc atcacgccgc gcgcgagccg cctgccgggc gccagagccg
     3001 gctggcgcgt tcgaatagcg ggctgatcag cggccagaac aacaggatga gcgccagcgt
     3061 cgtgatcgaa ccgacgagcc cgttcgacca gaacacgcgt agatcgccgc ccgcgccgat
     3121 catcgccagg cggaaggcat cctccgcgcg gttgcccagc accaatgcca gggtgaacgg
     3181 cgccagcgga atcccgatct ttttgaaaac gtagccgacg acgccgaaaa cgagcatcag
     3241 ccagatgtcg aacatggcgt tctggatggc gtaggcgccg atcgcgcagg acaccacgat
     3301 catcggcgcg atcgccgaaa acggcacgcg caggacggcg gcgaagaccg gcaccgtggt
     3361 gagcaccaag acgaggccga cgacgttgcc gagatacatc gaggcgatca gcccccacac
     3421 gaaatccttg tgctcgacga acaggagcgg cccgggattg agtccccaaa ccatcagccc
     3481 gccgagcagg atcgccgccg tgccggaacc ggggattccc aaggccagca tcggcaacag
     3541 cgccgaggtc cccgacgcgt gcgccgccgt ttccggagcg aacacgcctt cgatgcgtcc
     3601 cttgccgaag ctgtccttgt ccttggaaaa acgcttggcg aggttgtacc ccatgaaaga
     3661 ggccgcaatc gccccgcccg gcgtgatccc gagccaacaa ccgatgaccg aggagcgcag
     3721 cagcgtcacc caatagcgcg gcagggcctt ccataccctg agcaccacgc gcaggctgat
     3781 gctggcggta tgtccgcgca acgccagccg ctcctccatg gtcagcagga tttcgctgat
     3841 gccgaacagg ccgatcaccg cgaccaggaa gttgatgccg cgtaagagct cgttccagcc
     3901 gaaggtcatg cgcaacgtgc cggagacggt gtccatgccg atgccggcga acagcaggcc
     3961 gagcgtcatg gagatgatgg tcttgtgctt gtcctcgcgc ccgagaccga cgaacgaaca
     4021 gaacgtcagc aggtaaaccg cgaagaactc cggcggcccg aattgcaggg cgaaagcggc
     4081 gatgccgggc gcaagaaagg tgatcagcag cacggcggcg agcgagccga tgaacgagga
     4141 ggtgaaggcg gcggtgagcg cttcgggcgc tttgccctgc tgcgccatcg gatagccgtc
     4201 gaaggtggtc gccaccgacc aggcctcgcc ggggatattg aacaggatcg aagtgatggc
     4261 gccaccgaac agcgcccccc agtagatgca ggagagcatc acgatcgccg aggtcgggtc
     4321 catcgtgaac gtgaggggga gcagaatggc gacgccgttg ggcccgccca atccgggcaa
     4381 caccccgacg aaaatgccga gcacgagccc gaccatcatc accgctagcg tcttccacgt
     4441 cagcaggacg tgaaagccgt ggagcaggag gccgaaggct tccatcgcgc caacctatag
     4501 ccgtttagta gccgaaggcg gcttcgagcg gacctttcgg catgatcacg tcgaaggcga
     4561 catcgaaggt gaaaaacatg atgacggcga acaggaacgc ggtgagcaag gacttccaca
     4621 gcgcgatgcg gccgatgatg cgcatgaagc cggcgatcag gaggaagctc gcgacgtaga
     4681 gcccgagcca ttgcgtgaat aggcagaata gcagcgtggg gatgaagact tgcatcacgc
     4741 ggcgcagttg gtcgtgcgtg aggaagatcc gcgcggcgcc ggtacgggtc acgagcgtgg
     4801 cgatgagacc gtagaggctg gcgccggcga gcaagacgcc gaggtagaac gggaaatagc
     4861 ctggctgcgg gccgtctgcc tcccaggcga ttcccgtgcg ccagttgtcg aagcagaaga
     4921 tccccgccaa ggcgagcagt agcaccgaga cgacgatctc gaccgtgcgg gtgctcacca
     4981 ccgaggggga attgtccgcc ggcgcggtcg ggtcgtcgac gacgatgtca gcttcgggcg
     5041 agggcattgt cggcatcgct gctaatgccc tttccgcggg ggcggagggc aggttgctgt
     5101 tgcaacatca aggaagggat gagggggttc ggatccatcg gccgtgccgc taatcccctc
     5161 acctcaaccc tctccgcgaa cggcgacagg gagcgcgccg gccttgcagc gcgtttatgc
     5221 gcacgatgta gatgcgtcac taatgtgcga caaatcccgc ctcggtcatg agattcttgt
     5281 tcaatgcatc gtcctcttcg aggaacttca ccatgtcgcc gccggtcagg aagatcggct
     5341 tgagcgcctg cttctccatg tagtccttgt attcggtggt ctgcgtcagc ttcttgaaca
     5401 gatcgacgta aaacgccgtc tgctcgggcg tcaccttgcc cggcaggaac atggcgcgca
     5461 gcatcagata ttggatgtcg agaccctcgt ccttgcaggt cgggatgtcg ttccaggaca
     5521 tgtcgccggc gaccttgccc ttgtattcga tccgctcctt gtcgaatacg cacaacggcc
     5581 gtacttggcc ggcgcgccag acttcgagat tttccgaggg attgttgacg ttggcggcgg
     5641 tatgattgcc gacgagctgg gttgctgcct cgcccccgga cttgtagggc agatacgcga
     5701 acttcgctcc ggtcttcttc tccaggaaca cggtgagcac gtgatcttcg cgccgtgagc
     5761 cggtgccgcc catcttgagc ggcgggttcg cgctcttcgc tgcggcgacg aattctttca
     5821 ccgtcttgta gggctcctgc gcgttcaccc acagcgcgaa ctcatcgagc gcgatgacgg
     5881 agacgggggt gaggtcgcgc caattgaacg gaatcttggc agagagcggc agcatataga
     5941 tcagcgaata ggcgatgaga accttgttgg ggtcgccttc gttcgatttc atgtagatga
     6001 gcgcctcggc acccgacgcg ccgcccttga gcgaaacgac catcggctgc ttcatcagat
     6061 tgttcttctg cacggcggcc tgcatcatgc gcgccatctg gtcggatgcc ccgcccgcgc
     6121 cggcggcaac gacga
//
LOCUS       DATCWM010000106         6283 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_270781, whole genome shotgun sequence.
ACCESSION   DATCWM010000106 DATCWM010000000
VERSION     DATCWM010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6283)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6283)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6283
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_270781"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(45..1175)
                     /locus_tag="VIQ50_01940"
     CDS             complement(45..1175)
                     /locus_tag="VIQ50_01940"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEY9359168.1"
                     /translation="MLPSPCSAPPQIPMRSRRRCACCSRRNIRCYVLYAQASDRLAAL
                     AELIPAPVLTTNPGKSAIPETHPLALGASTRSRPKMVTEFMAKADLVLAVGSSLTRTP
                     FGPSVPAGKTIIHATNDAADINKEYRVDHAVIGDAALVLDAIIAEVDRQKGAGGANAL
                     ASLKEEVAAAKKAWLAEWDKHLNSEEVPINQYRVIRDLMRSVDRDNVIITHDSGGPRE
                     QLLPFWETTAPGSYMGWGKSTQLGYGLGITMGAKLAAPEKLCINIMGDASIGMTGMDI
                     ETAARNRIAILTIVFNNGVMAAERDVLELSTKKYGALTIGGNYTKVAEGLNVAAMRIA
                     KPGDIVPAIKDAVRVTETGAPFLLEILVKEGYDFSRYPLTGL"
     gene            complement(1390..1872)
                     /locus_tag="VIQ50_01945"
                     /pseudo
     CDS             complement(1390..1872)
                     /locus_tag="VIQ50_01945"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
     gene            1935..2768
                     /locus_tag="VIQ50_01950"
     CDS             1935..2768
                     /locus_tag="VIQ50_01950"
                     /inference="COORDINATES: protein motif:HMM:NF018352.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MipA/OmpV family protein"
                     /protein_id="HEY9359169.1"
                     /translation="MRGRRAAIAGILAALATPMVASAADDIARTYRAPASAYDWTVTV
                     GAEGRDEPLFQGSSRERLRPYPIFAVRRYGAPEPFRGPRDGLDIAVIDQGNYQVGPVG
                     QLVYSQRDKADLPSVRSLGNVPWAAEVGVFAQYWWVPWLRSRVEVRQGFNGHHGIVSD
                     ITTDAVVPVTRQWTLSAGPRLTLATTPAVSPYFSITPIQSLLSGLPAYDAKGGVRSYG
                     AGAQARYLWTPQLATHVFIEYERLTGDVSGSPLVTQRGSPDQVTIGFGATQAFDIKSP
                     W"
     gene            2854..3873
                     /locus_tag="VIQ50_01955"
     CDS             2854..3873
                     /locus_tag="VIQ50_01955"
                     /inference="COORDINATES: protein motif:HMM:TIGR03476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flippase-like domain-containing protein"
                     /protein_id="HEY9359170.1"
                     /translation="MIKQAGVIAWLAGIAALVALTVWSGLDQVGHAIASIGWGILLVV
                     VVRAGTVFVAGAGWWLLFPPKVRPQFGPCLLLRFIREAVNVLLPVAQVGGDVVGARLL
                     TGYGVPGALAAASVIVDVLIQAAAQFLFAALGLLTLMALGADHTLARSAAIGIAVAAL
                     LLAGFYVAQRRGGQRVLQAIVNRLAGDREWRVLGTIDAVYRNLAMIYAARASLVASSV
                     VHLAGWVVGTAEVWIVFAFMGHPVSIGEALVIESLLHAVRGAAFAVPSALGAQEGALV
                     LLCAAFGIPPEEAIALSLVKRAADLVLGVPGLIGWQMLEWGRLMPTYREQPVRESVDP
                     RSRSH"
     gene            3882..5042
                     /gene="hpnI"
                     /locus_tag="VIQ50_01960"
     CDS             3882..5042
                     /gene="hpnI"
                     /locus_tag="VIQ50_01960"
                     /inference="COORDINATES: protein motif:HMM:TIGR03472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohopanetetrol glucosamine biosynthesis
                     glycosyltransferase HpnI"
                     /protein_id="HEY9359171.1"
                     /translation="MVLFWCSVAASAVAGIGCGYLITAAILLRRFAHDRVGASPAATP
                     SVTILKPLHGSEAGLFENLGSFCAQDYPGDIQIICGVQHTSDGAVAVVERLRELKPTR
                     NLDLVVDAKVHGLNRKVSNLVNMAPRIRHEIVVLADSDIRVDPGYLCRVIAALEQPGV
                     GAVTCLYHGVALTGVWARLAALLTNAQFLPSVVFALAFGLAHPCFGSTLALRREALTA
                     IGGFKPFVDCLADDYAMGAALRAHGGNVVIPRFAVAHVCTQTSLSELWRQQLRWARTI
                     RSIDPIGYAGSLVSHPLGWALLAVLVGAGSTALLPAAAAVIAAIACRVAVLRQVERAY
                     RLASQPYWLVPACDLLSFAVFAISFLNWKVSWRGHRFRMVAGDWTADRGTNQ"
     gene            5042..>6283
                     /gene="hpnJ"
                     /locus_tag="VIQ50_01965"
     CDS             5042..>6283
                     /gene="hpnJ"
                     /locus_tag="VIQ50_01965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012317976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hopanoid biosynthesis associated radical SAM
                     protein HpnJ"
                     /protein_id="HEY9359172.1"
                     /translation="MRTLFLQAPSFDGFDGGAGARYQMRREIQSYWYPTWLAQPAALV
                     ADSKLIDAPPHRLKFADVAPEATSRDLVVMHTSTPSFSVDVRTAEALKTLKPSLKIGM
                     IGAKVAVEPEASLKASPAIDFVARNEFDFTVKEVADGRDFARIAGLSWRNADGVIVHN
                     ADREVLENMDELPFVTPVYKRDLVIENYFSGYLRHPYLSFYSGRGCKSRCTFCLWPQT
                     IGGHRYRTRSVGHVIEELAWAQKAFPQVKEFFFDDDTLTDNLPRVEALAREIGKLGMM
                     WSCNAKANVPRSTLKVLKDNGLRLLLVGYESGNQKILHNIKKGMRVDVAKRFAKDCRE
                     LGIVTHGTFILGLPGETKETIEETIRFAIEVNPHTIQISLAAPYPGTFLYKQALENGW
                     LVDENAELLTDSGMQIASLSYP"
BASE COUNT          992 a         2029 c         2081 g         1181 t
ORIGIN      
        1 gcgcggggag aggccgcccg cccagttcgc accgcggatt tcagctacag ccccgtcagc
       61 gggtagcgcg agaagtcgta gccttccttg accaggatct ccaacaggaa cggcgcgccc
      121 gtttcggtga cgcgcacggc gtccttgatc gccggcacga tgtcgcccgg ctttgcgatc
      181 cgcatcgcgg caacgttgag gccctcggct accttggtgt agttgccgcc gatcgtcagc
      241 gcgccgtatt tcttggtcga gagctcgagc acatcgcgtt cggccgccat gacgccgttg
      301 ttgaacacga tggtgagaat ggcgatgcga ttgcgggccg cggtctcgat gtccatgccg
      361 gtcatgccga tggaggcgtc ccccatgatg ttgatgcaaa gtttctccgg cgccgcgagc
      421 ttcgcgccca tggtgatgcc gaggccgtag ccgagctggg tcgacttgcc ccaacccatg
      481 taggaaccgg gcgcggtcgt ctcccagaac ggcagcagct gttcgcgcgg gccgcccgaa
      541 tcgtgggtga tgatgacgtt atcacggtcc acgctgcgca tgagatcgcg aataacgcga
      601 tactgattga tcggcacttc ctcggaattg agatgcttgt cccactccgc gagccacgct
      661 ttcttggccg cggcgacctc ctccttgagg gaggcgagcg cgttcgcccc gcccgcgccc
      721 ttttgccgat cgacttcggc aatgatcgcg tcgagcacca gcgcggcgtc gccgatcacc
      781 gcatggtcga cccgatactc cttattgatg tcggcggcgt cgttggtggc atggatgatc
      841 gtcttgccgg ccggcacgct gggcccgaac ggcgtgcggg tgagactcga gccgacggcc
      901 agcacgagat cggctttggc catgaactcg gtgaccatct tcggccgcga gcgggtcgag
      961 gccccgagcg cgagcggatg cgtttcggga atcgcgcttt tccccgggtt ggtggtgagg
     1021 acaggcgccg gaatgagctc ggccagcgcc gcgaggcgat cgctcgcttg cgcataaagt
     1081 acgtagcagc ggatgtttcg ccgcgagcag catgcgcacc gccgtcttga ccgcatcggg
     1141 atctggggcg gcgcgctgca cggggacggg agcataatcg agttcgcccg cgtattcggc
     1201 ctcccaaact tcggccggaa cctctatgag taccggcccg cccttgccgc tgcgcatggc
     1261 gtgataggcg cggcgcatca ggtccggcag ctcctgcacc gaatgggcca gtgccgacca
     1321 tttggtgacc ggccggtaca cgtcggctgc gcggaatacc gggcgcacgt attggcgcgc
     1381 cagcgacagc ccggcgggaa tcatgagcag cgggacgttc tcggaaaacg cctgggcgac
     1441 cccaggaaag gcattctcga tgccgggacc cgcttgcgcg gcgaatacgc cattgcgctt
     1501 gccgcacttg atgcgggtgt aaccgtccgc caagccgacg cccacgcgct cttgccggca
     1561 gaggatcggg cgaatctcga gggcggcgca ggcctcgatc agcgggttgc gcggatagca
     1621 cgagagaaac tccgtgccct cgcgcctgag gatttcggcg atgacggcgg cgccgttcat
     1681 ggatggttcc tcccttgctg ccgcggcatt ctgccatacc ccgacaccat gcggcggcgg
     1741 aacgcacccg ccggcggccc ctgaattttc gcaattttta gaacctgttg gagccaggcc
     1801 acacgcccac tggaaaagga gttgcagggg gcccatccac cggccgcgcg ttgtgcaggg
     1861 ggcctccgtc atgttaacga gggctgaata gagtcgagca atattatccc tcctggggac
     1921 taaagagggg gcgaatgagg ggtcggcgcg ccgcgatcgc cggtattttg gctgcgctgg
     1981 cgacccctat ggtggcgtcc gccgccgacg acattgcgcg cacctaccga gcgccggctt
     2041 ccgcctatga ctggaccgta acagtcggag cggaaggcag ggacgagccg ctctttcaag
     2101 gttcgagccg cgagcgcctg cgtccctatc ccatcttcgc cgtgcgccgc tatggcgcgc
     2161 ccgaaccttt ccgcggccca cgcgatggct tggacatcgc ggtaatcgac caagggaatt
     2221 accaggtcgg tcctgtcggc caattggtgt attcgcagcg tgacaaggcc gacttgccgt
     2281 cggtgcgcag cctcggcaac gttccctggg cggcggaggt gggcgtcttt gcgcagtatt
     2341 ggtgggttcc ttggctgcgc agtcgcgtcg aggtgcggca gggcttcaac ggccaccacg
     2401 gcatcgtctc cgatatcacg acggacgccg tcgttccggt gacccggcag tggaccctgt
     2461 cggctgggcc gcggctcacg ctggcgacca cgcccgcggt cagtccgtat ttcagcatca
     2521 cgccaatcca gtcgctgcta tcgggcctgc cggcctatga cgccaagggg ggcgttcggt
     2581 cgtacggcgc aggcgcgcaa gcgcgctacc tgtggacgcc gcagttggcg acgcacgtct
     2641 ttatcgaata cgaacggctc accggcgacg tctcgggctc gccgctcgtc acgcagcgag
     2701 gttcgcccga ccaggtgacg atcggattcg gggcaaccca ggccttcgac atcaaatcgc
     2761 cgtggtaatt cgcgactgcg gataggatgg gccggcccgg cccgcttgtc cccaagaagc
     2821 ggacagcggg tcgcgtcgag cgggggagcg ggaatgatca agcaagccgg cgtgatcgcg
     2881 tggttggccg gcattgccgc gctcgtcgcg ctcaccgttt ggtccgggct cgaccaggtc
     2941 ggccacgcga tcgcaagcat cggttgggga attctgctcg tggtggtggt gcgcgccggc
     3001 acggttttcg tggcgggcgc aggctggtgg ctgctcttcc cgcccaaggt gcgcccgcag
     3061 tttggtccct gtctgctcct gaggttcatt cgcgaggcgg tcaacgtcct gttgccggtg
     3121 gcgcaagtcg gcggcgacgt ggtcggtgcg cgattgctga caggctatgg cgtcccgggg
     3181 gcgctcgcgg ccgcaagcgt catcgtcgac gtcctcatcc aagctgccgc acaatttcta
     3241 tttgcagcgc tcggcctgct tacgctgatg gcgctgggag cggatcatac gctggcgcga
     3301 agcgcggcga tcgggattgc cgtcgcggcg ctgttgcttg ccgggttcta tgtcgcgcaa
     3361 cggcgcggcg ggcaacgcgt gcttcaagcg atcgtcaatc gtctggccgg cgaccgggaa
     3421 tggcgcgtgc tcggcaccat cgacgccgtc tatcgcaacc tggccatgat ctacgcagcg
     3481 cgagcgagcc tcgtcgcgag cagcgtcgtg cacctggccg gctgggttgt cggcaccgcg
     3541 gaagtatgga tcgtgttcgc cttcatgggg caccccgtca gtatcggcga ggcgctcgtg
     3601 atcgagagcc tgctgcacgc cgttcgtggc gccgcgttcg ccgttcctag cgcgctcggg
     3661 gcgcaggaag gcgcgctcgt cctgctgtgc gcggcatttg gaattccgcc ggaggaggcg
     3721 attgcactgt cgctcgtcaa gcgggcggcc gatctcgtgc tcggcgtgcc tggcctcatc
     3781 ggctggcaga tgctggagtg gggtcggctg atgccgacct atcgcgagca accagtccgc
     3841 gagagcgtcg atccacgttc gcggagccac tgagccacgg catggtcttg ttctggtgtt
     3901 ctgtcgcggc gtcggcggtc gccggcatcg gctgcggata tctgatcacg gctgcgattc
     3961 tcctgcgccg cttcgcgcac gatcgcgtcg gcgccagtcc cgccgccacg ccgtcagtca
     4021 ccattctcaa gccgttgcac ggcagcgagg cgggcttgtt cgagaacctc ggctcctttt
     4081 gcgcccaaga ttatcccggc gacattcaga tcatctgcgg cgtccagcat acgagcgacg
     4141 gcgcggtggc ggtcgtcgag cgcctgcgcg agctcaagcc cactcgcaat ctcgatctcg
     4201 tggtcgacgc caaggtgcac gggttgaatc gcaaagtctc gaacctcgtc aacatggcgc
     4261 cgcgcatacg ccacgagatc gtcgtcctcg ccgatagcga tattcgggtc gatcccggct
     4321 atctttgccg cgtgatcgcc gcgctcgagc agccgggcgt cggtgccgtg acctgcctct
     4381 accacggcgt tgccctcacc ggcgtctggg caagattggc agcgctcctc accaacgcgc
     4441 aattcctgcc gagcgtcgtg ttcgcccttg cgttcggcct ggcgcatcct tgcttcggct
     4501 cgacgctggc gctcaggcgc gaggctttga cggcgatcgg tggcttcaag cctttcgtcg
     4561 actgtcttgc ggacgattac gcgatgggag cagcgttgcg cgcacacggc ggcaatgtcg
     4621 tgataccgcg cttcgccgtc gcccatgtct gcacgcagac gtcgctgagc gaactctggc
     4681 ggcagcagct gcgatgggcg cgcacgatca ggagcatcga ccccatcggc tacgcgggtt
     4741 cgctcgtgag ccatcccttg gggtgggcgc ttctcgcggt gcttgtcggc gccggctcga
     4801 ccgcccttct tccggcggcc gccgcggtga tcgcagcaat tgcgtgccgg gtggcggttc
     4861 tgcgacaggt cgagcgggcc tatcgtcttg cctcccaacc atattggctt gtgcccgcct
     4921 gcgacctatt gtcgttcgcg gtgttcgcta taagctttct gaactggaag gtgagttgga
     4981 gaggtcaccg gttccggatg gttgcggggg actggacggc tgatcggggg acaaatcaat
     5041 gatgcggacg ctgtttctac aagcgccatc gttcgacggc ttcgacggcg gcgccggcgc
     5101 gcgctaccag atgcgccgcg agatccagtc ctactggtat cccacctggc tcgcgcagcc
     5161 tgccgcgctc gttgccgact caaagctcat cgacgcgccg ccgcaccggc tcaaattcgc
     5221 cgatgtcgcg ccggaggcca cgagtcgcga tctcgtcgtg atgcatacct cgacgccgtc
     5281 gttctcggtc gacgtgcgca ccgccgaggc gctcaaaacg ctcaagccga gcttgaagat
     5341 cggcatgatc ggggcgaagg tcgccgtcga accggaggcg agcctgaagg cttcccccgc
     5401 gatcgatttc gtcgcccgca acgagttcga tttcaccgtc aaggaagtgg cggacgggcg
     5461 tgacttcgcg cgcatcgccg ggctctcctg gcgcaacgcg gatggcgtca tcgtgcacaa
     5521 cgcggaccgc gaggtgctgg agaacatgga cgagcttccg ttcgtcacgc ctgtctacaa
     5581 gcgcgatctc gtcatcgaga attatttcag cggctatctg cggcacccct acctttcctt
     5641 ctattccggc cgcggatgca agtcccgctg caccttctgc ctgtggccgc agacaatcgg
     5701 cggtcatcgc taccgcactc gcagcgtcgg ccatgtgatc gaggaactcg cctgggcgca
     5761 gaaggcgttt ccgcaagtca aggaattctt cttcgacgac gacacgctga ccgacaacct
     5821 gccacgcgtc gaggcgctcg cgcgcgagat cggcaagttg gggatgatgt ggtcgtgcaa
     5881 cgccaaggcc aacgtgccgc gatcgaccct gaaggtcttg aaggacaacg gccttcggct
     5941 gctgctcgtc ggctacgagt ccggcaacca gaagattctt cacaacatca agaaggggat
     6001 gcgggtcgac gtagccaagc gcttcgccaa ggactgccgc gagctgggga tcgtcaccca
     6061 cggcaccttc atcctcggcc tgcctgggga gaccaaggag acgatcgagg aaaccatccg
     6121 cttcgccatc gaggtcaacc cccacaccat ccagatttcg ctggcggcgc cttatcccgg
     6181 cacattcctc tacaaacagg cgctggagaa cggctggctg gtcgacgaga atgccgagtt
     6241 gctgaccgac agcggcatgc agatcgcatc gctgagttac ccg
//
LOCUS       DATCWM010000107         2264 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_297724, whole genome shotgun sequence.
ACCESSION   DATCWM010000107 DATCWM010000000
VERSION     DATCWM010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2264
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_297724"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..506
                     /locus_tag="VIQ50_01970"
     CDS             <1..506
                     /locus_tag="VIQ50_01970"
                     /inference="COORDINATES: protein motif:HMM:NF039581.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359173.1"
                     /translation="AVRRSEVSVAGIAVERSADMRYVGQEHAVTVELPLELFQAEDRD
                     AIKARFDAVHARRYGYSAPGERAEIVSLRSAVTGLLRKPAFEPIAAGNAAPPAAAFRV
                     ARPVYFAEAGCWVDTPSYDRAALLAENRITGPALIEEYASTTVVHPGDVVAVDAFGDL
                     VIEVLRS"
     gene            509..>2264
                     /locus_tag="VIQ50_01975"
     CDS             509..>2264
                     /locus_tag="VIQ50_01975"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HEY9359174.1"
                     /translation="MDAALKPKVSSAGYRPDPVTTEIVRNGLIAATEEMKTNLMRTAY
                     NMIIYEALDFTVGLFDAEGNTVSIGLGLPMFIRGMSDTVKAKLAHYGVENLDPGDILL
                     TNDAYITGSHLNHMTFTVPIFHDGEVVGFSCCMAHWPDVGGTLDGATTDIFSEGLQMP
                     IVKIYRKGVPNEELISIIRTNVRLPERAMGDFRAQIAAVKTGERRFLEMIDKYGHDAV
                     VGGIEAIMQHSEAATRARLREIPDGIYEAESFMDDDGVRLGERVPIRVRVEIAGERMK
                     VDLTDVAKQVAGFYNSGETAGRSCCQVAFKCLTSPLDLPINDGQFRALEIVLPPGRVV
                     SALKPAAMRMWMTYPMTIIDTIFKALAPAIPERIIAGHHADLVVGRVNGRRPRDDSFY
                     IYLGGLIGGGWGAKHNGDGRNATIAMNDGDTHNGPSEQVEAKYPLLVERYALRPDSGG
                     PGRFRGGLGCEQVVQARHELRFNSQMDRVKCKPWGLAGGLCGAGNSVAIHRFAAAQEQ
                     RFHNGKALNQVLHAGDAYILRSGGGGGFGSPLDRDLEGLARDVRCGYVSRQAAETYYG
                     AVFAPGSNTIDAAATAARR"
BASE COUNT          407 a          730 c          732 g          395 t
ORIGIN      
        1 aggccgtccg ccgcagcgag gtttccgtcg ccggaatcgc cgtagagcgt tcggcggaca
       61 tgcgctacgt cgggcaggag cacgcggtca ctgtcgagtt gccgctcgaa ctgtttcaag
      121 ccgaggatcg cgatgccatc aaagcgcgct tcgatgccgt gcacgcaagg cgctacggct
      181 attcggcccc cggggaaagg gcagagatcg tcagcctgcg cagtgcggtc acgggcttgc
      241 tgcgaaagcc ggcattcgaa ccgatcgccg caggcaatgc cgcgcctcct gcggccgctt
      301 ttcgcgtcgc gcgtcctgtc tattttgccg aggcgggctg ctgggtcgat accccaagtt
      361 atgatcgcgc agcgctgctc gccgaaaacc gcatcaccgg cccggcattg attgaggaat
      421 atgcgtccac caccgtcgtg catcccggtg atgtcgtcgc ggtcgacgct ttcggcgatc
      481 tggtgatcga ggttttgcgg agctgagcat ggatgccgcg ctgaaaccca aggtctcgtc
      541 tgccggctac cggccggatc cggtgacgac ggaaatcgtg cgcaatggtc tcatcgccgc
      601 aaccgaagag atgaagacca atctgatgcg caccgcctac aacatgatca tctacgaggc
      661 gctcgatttc accgtcggcc tgttcgatgc agagggcaat accgtttcga tcgggctcgg
      721 attgccgatg ttcatccgcg gcatgagcga tacggtgaaa gccaagctcg cccattacgg
      781 cgtcgagaac ctcgaccccg gcgacatcct cctgaccaac gatgcctata tcaccggcag
      841 ccacctcaac cacatgacct tcaccgtgcc gatctttcac gatggcgagg tggtgggatt
      901 ctcctgctgc atggcgcatt ggcccgacgt cggcggcacg ctcgacggcg ccacgaccga
      961 catcttttcc gaaggcctgc agatgccgat cgtgaagatc taccgcaagg gcgtgccgaa
     1021 cgaggaactc atctccatca tccggaccaa cgtgcgtctg cccgagcggg cgatgggaga
     1081 ctttcgcgct cagatcgccg cggtcaagac tggcgagcgg cgcttcctcg aaatgatcga
     1141 caaatacggc cacgacgccg tggtcggagg catcgaagcc atcatgcagc acagtgaggc
     1201 cgccacgcgc gcgcgcctgc gcgagattcc cgacggcatc tacgaggcgg aatccttcat
     1261 ggatgacgac ggcgtacggc tgggcgagcg ggtgccaatc cgcgtgcggg tcgagatcgc
     1321 gggcgaacgg atgaaggtcg acctcaccga cgtggcgaag caggtggcgg gcttctacaa
     1381 ctccggcgag acggcgggcc gatcctgctg ccaagtcgca ttcaaatgtc tgacctcgcc
     1441 gctcgatctt cccatcaacg acggacagtt ccgcgcgctg gaaatcgtgc tgccgcccgg
     1501 acgtgtggtc agtgcgctca aacccgccgc gatgcgcatg tggatgacct atccgatgac
     1561 catcatcgac acgatcttca aggcgctcgc acctgcgatc cccgagcgca tcatcgccgg
     1621 ccaccacgca gatctcgtcg tcgggcgcgt caatggccgc cggccgcggg acgacagctt
     1681 ttacatctat ctcggcggct tgatcggcgg cggctggggc gccaagcaca acggcgacgg
     1741 ccgcaatgcc accatcgcga tgaacgacgg cgacacccat aacgggcctt ccgagcaggt
     1801 cgaggcgaaa tatccgctgc tggtcgagcg ctatgcgtta cgtcccgatt cgggcggacc
     1861 tggtcgcttc cgcggcgggc tgggctgcga gcaggttgtg caggcgcgcc atgagcttcg
     1921 tttcaactcg cagatggatc gcgtgaagtg caagccgtgg ggtctcgcag gcgggctgtg
     1981 cggcgccggc aattcggtcg cgatccaccg tttcgccgcg gcgcaggagc agcgtttcca
     2041 caacggcaag gcgctcaacc aggtcctgca cgcgggcgat gcctacatcc tgcgctccgg
     2101 cggcggcggc ggcttcggct cgccgctcga tcgcgacttg gaaggcctcg cgcgcgacgt
     2161 gcgctgcggg tatgtgagta gacaggcggc cgagacatat tacggcgcgg tgttcgcgcc
     2221 cggttcgaat acgatcgacg cggcggcgac cgctgcgcgg cgcg
//
LOCUS       DATCWM010000108         2201 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_378731, whole genome shotgun sequence.
ACCESSION   DATCWM010000108 DATCWM010000000
VERSION     DATCWM010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2201
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_378731"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..433
                     /locus_tag="VIQ50_01980"
     CDS             <1..433
                     /locus_tag="VIQ50_01980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008139178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9359175.1"
                     /translation="ANLPLARAQDVVREAAEIVGLAERLDQPAGQLTTAGKKRLELAR
                     ALSARPELLLLDEVLAGLNPTEIERMIAVIRRIRDRGIAILMIEHVMRAIMRLSDRIV
                     VLNLGGKLAEGTPRSVANNPEVIAAYLGAPEPAGQSADVSK"
     gene            430..1146
                     /locus_tag="VIQ50_01985"
     CDS             430..1146
                     /locus_tag="VIQ50_01985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9359176.1"
                     /translation="MSEPLLRVEALEAGYDEVQVLWGISLGVAPGTMTTLVGANGAGK
                     TTSLRAITGNIQPFGGRVFFAGEDVTQLAPHAKAGRGLVLVPEGRQLFDTMSVQDNLE
                     MGAFSKRARRRFAERLDQIYTLFPRLKERARQKAGTLSGGEQQMLAIARGLMSDPEVL
                     IIDELSLGLAPVVVQQLASTLRALKESGMTILLVEQNVQLALALSDYAYVIAEGRAFT
                     EGSSAEVARKPEIRQAYLGL"
     gene            complement(1174..1662)
                     /locus_tag="VIQ50_01990"
     CDS             complement(1174..1662)
                     /locus_tag="VIQ50_01990"
                     /inference="COORDINATES: protein motif:HMM:NF028004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P460 family protein"
                     /protein_id="HEY9359177.1"
                     /translation="MLQRLRLLSATLGLLAVGAFSAEPADDIKPPSGYRQWFHVNTMI
                     IDKGSPLFANLGGMHNVYVNSTGLAALKKGGPYPDKSTFVTDLHQFTVSDGLYVEGAR
                     KALAIMVKDAKKYASTGGWGFQLWASGDANKPMVTDAAKQCFACHQPKKDQDYVYSTY
                     IP"
     gene            1821..>2201
                     /locus_tag="VIQ50_01995"
     CDS             1821..>2201
                     /locus_tag="VIQ50_01995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008960839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEY9359178.1"
                     /translation="MSASVKQMLEAANAAVPRITPAQAREMIAKGNTLVVDVRDPPEV
                     QQSGKVAGAVAVSRGMLEFRADPESPYHDKNFAKNKSVIVYCASGGRSALAGKVLKDM
                     GYEQVYNLGGFKDWAEAGGAVDKPS"
BASE COUNT          405 a          680 c          724 g          392 t
ORIGIN      
        1 tgcgaacctg ccgctcgcgc gcgcgcagga cgtcgtgcgc gaagcagccg agatcgtcgg
       61 cctcgccgaa cgcttggatc agcctgccgg gcaattgacg actgccggca agaagcggct
      121 ggagcttgct cgcgctctga gcgcgcgccc cgaacttttg ctgctcgacg aggtgctcgc
      181 cggtctcaat ccgaccgaga tcgagcgaat gatcgcggtg atccgccgca tccgcgaccg
      241 cggcatcgcc atcctgatga tcgagcatgt gatgcgcgcg atcatgaggt tgtccgaccg
      301 gatcgtggtg ctcaatctcg gcggcaagct cgccgaggga acgccgcgct cggtggcgaa
      361 caatccggaa gtcattgccg cttatctcgg cgcgcccgag ccggccggtc aaagcgcgga
      421 cgtctcgaaa tgagcgagcc gctgttgcgc gtagaggccc tcgaggcggg ctatgacgag
      481 gtccaagtcc tctgggggat ttcgctcggc gtggcgccag gcaccatgac gacgttggtc
      541 ggcgccaatg gcgccggaaa aacgacgagc ctgcgcgcca ttaccggaaa catccagcca
      601 ttcggcggca gggtgttctt cgccggcgaa gatgtcaccc aactcgctcc gcacgccaag
      661 gccgggcgcg gattggtgct ggtgccggaa gggcgccagt tgttcgacac gatgagcgtg
      721 caggacaact tggagatggg cgccttctcc aagcgcgcgc ggcgccgctt cgccgagcgg
      781 ctcgatcaaa tctacacgct gtttccgcgg ctgaaagaac gcgctcgaca aaaggccggc
      841 acgctttccg gcggcgagca gcagatgctg gcgatcgcgc gcggcctcat gtccgatccc
      901 gaagtcttga tcatcgacga attgtcgctc ggattggccc ccgtcgtcgt gcagcagctc
      961 gcgagcacgc tgagagccct gaaagagtcg ggcatgacca tcctgctcgt cgaacagaac
     1021 gtgcagctgg cgctggcgct gagcgactac gcctatgtca tcgccgaggg gcgggcgttc
     1081 accgaaggat catctgccga ggtggcgcgg aaacccgaga tccggcaagc ctacctcgga
     1141 ctttgagcct tgtcggctgc ctcgctccgt gcgtcaggga atgtaggtgg aatagacgta
     1201 gtcctggtct ttcttcggct gatgacatgc gaagcattgc ttcgcggcat ccgtcaccat
     1261 gggcttattc gcgtctccgc tagcccagag ctggaacccc cagccgccgg tcgacgcgta
     1321 cttcttcgcg tccttcacca tgatggccag cgccttgcgc gcgccttcca cgtacaagcc
     1381 gtcggaaacc gtgaattgat gcaggtcggt cacgaaggtg ctcttatccg gataaggtcc
     1441 gcccttcttg agcgcggcta gtccggtcga attgacgtag acgttgtgca ttccgccgag
     1501 attggcgaac agcgggcttc ctttgtcgat gatcatggta ttgacgtgga accactgccg
     1561 ataaccgctc ggcggcttga tatcgtcggc gggttcggcg gagaatgcgc cgacggcaag
     1621 gaggccaagg gttgccgaaa gcaagcgtag tctctgcaac atgccgtgtc ctccgatgct
     1681 gatcgccggc gccgcgcggc atgcggccgc agtctaaggc ccggcacgca ggaagcaaat
     1741 tcgtctcgat ccgggtccat ccgattgctc tggcccgcgg tcgaaaagcg cagtttcgaa
     1801 tccggggaaa ggaggacgca atgtccgcaa gtgtcaagca gatgctggaa gccgccaatg
     1861 ccgctgtgcc gcggatcacg ccggcgcaag cgcgcgagat gatcgccaag ggcaacacac
     1921 tggtggtcga cgtgcgcgac ccgcccgaag tgcaacagag cggcaaggtt gccggcgcgg
     1981 tggccgtctc gcgcggcatg ctggaatttc gtgccgatcc ggaatcgccg taccacgaca
     2041 agaatttcgc gaagaataag agcgtcatcg tctactgcgc ctccggcggg cgctcggcgc
     2101 tcgctggcaa ggtgctcaag gatatgggct acgagcaggt ctacaatctc ggcggtttca
     2161 aggattgggc cgaggccggc ggcgccgtcg acaagccgag c
//
LOCUS       DATCWM010000109         3057 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_76408, whole genome shotgun sequence.
ACCESSION   DATCWM010000109 DATCWM010000000
VERSION     DATCWM010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3057
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76408"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..806)
                     /locus_tag="VIQ50_02000"
     CDS             complement(<1..806)
                     /locus_tag="VIQ50_02000"
                     /inference="COORDINATES: protein motif:HMM:NF015272.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004833 - tryptophan 2,3-dioxygenase
                     activity [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan 2,3-dioxygenase family protein"
                     /protein_id="HEY9359179.1"
                     /translation="MSNSSRKDAFYYADYLKLSALLAAQQPESARHGRPAHDEMLFIV
                     VHQTYELWFKQILHELDRIQADFGGEVVEDEYLGRIVHGLERINEILKLLIQQLEVLE
                     TMTPLDFLDFRDFLIPASGFQSAQFRLIEIRLGLARAMRSDYAGKPFDDTLSEADRAR
                     IAAAEDAPKLVDQLDRWLSRTPFVHRSDYDFSREYRNAVQRMLEDDAARLRANQAMSP
                     EQREAEAKRIEASLVEFQAIFAAASGPSPWQMSRAAVQAALFIIVYRDRPV"
     gene            complement(950..1909)
                     /locus_tag="VIQ50_02005"
     CDS             complement(950..1909)
                     /locus_tag="VIQ50_02005"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012041233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9359180.1"
                     /translation="MAAHKQKIGWIGVGRMGSPMAERLLKAGYDLSIWNRTRAKAEPL
                     AKMGGKVVDNLLELKDVDVLFSIVSTGKDLDQVYFGKNSVSGHGGKLPKIFVDCSTIS
                     VEESAAIRDRLAQLGCDYVAAPVSGNAKVIKAGKLSAVISGPEAACKTVTPMLEAIAP
                     RGVSYVGDGELARICKIAHNVMLGVVIENLIEITLLANKMGVPRHAFLAFMNNGVMGS
                     MFTAYKSPALVNLDWTTTFTPELLRKDLDLGLALGREWDVPMPVTAAAREVLQGHFGA
                     ATLKSDPQEYLQKDFAALMETMALASGMKLKSENKNVPTGLES"
     gene            complement(2071..>3057)
                     /locus_tag="VIQ50_02010"
     CDS             complement(2071..>3057)
                     /locus_tag="VIQ50_02010"
                     /inference="COORDINATES: protein motif:HMM:NF016999.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB family transcriptional regulator"
                     /protein_id="HEY9359181.1"
                     /translation="VHLPLPWLLGALFTTMALSLAGAPVRLIPWGRPAGTVVVGASTG
                     LQFTATVVAKLVTLLPLIIAAAFISTIVGAIGGLLYMRLTGIDRVTAFFATVPGGVVE
                     TTTIAPYYGGHLEPIMVAQTTRVALIVMFAPFLVISLVGGGAQNPLLAIPVVPWLPIL
                     GLLVVSGITATLLSRTRSPNAWLMAPLFIAAGASHLGWMEGRMPDVLLIAAQILIGSA
                     LGAQFRPAFLTRLFRLLWASCLVVLFAAGSMALFAAAFAWLADYPVPTMVLAMAPAGI
                     AEMVLTGKVLGLDATLIAGFQLMRIIIVLIWCRTALVLFHRVADWAFGKPQL"
BASE COUNT          564 a          978 c         1019 g          496 t
ORIGIN      
        1 accggccggt cgcggtagac gatgatgaac agcgccgcct gcaccgccgc gcgcgacatc
       61 tgccacggcg acgggcccga cgcggccgcg aaaatggcct gaaattcgac cagcgacgcc
      121 tcgatccgtt tcgcctcggc ctcccgttgc tccgggctca tcgcttggtt ggcgcgcagg
      181 cgcgccgcgt cgtcctcgag catgcgctgc actgcattgc gatattcgcg cgagaaatcg
      241 tagtcgctgc ggtgcacgaa gggcgtgcgc gagagccagc ggtcgagttg gtcgacaagc
      301 ttcggagcgt cttccgcggc ggcaatgcga gcacggtcgg cttcgctcag cgtgtcgtcg
      361 aacggcttgc cggcatagtc cgagcgcatc gcgcgcgcga gcccgagcct gatctcgatc
      421 agccggaatt gcgccgactg gaagccggag gccggaatga gaaagtcgcg aaaatcgagg
      481 aagtcgagcg gcgtcatcgt ctccagcact tcgagctgct ggatcaagag cttgaggatc
      541 tcgttgatgc gctcgaggcc gtgaacgatg cgcccgagat actcgtcctc caccacctcg
      601 ccgccgaaat cggcctggat gcgatcgagc tcgtgcagaa tttgcttgaa ccacaattcg
      661 taggtctggt gcacgacgat gaacagcatt tcatcgtgcg cgggccggcc gtgacgcgcg
      721 ctctccggct gctgggcggc gagaagcgcg gaaagcttca ggtaatcggc atagtaaaag
      781 gcgtccttgc gcgaggagtt ggacatcgcc gaacctttcg cacccgtgcc gaatgttccg
      841 cccgctgagc gaagcgacat tggggaatgc cggatggcgc cggcgctcat ccgggttaca
      901 ggcctagttt atcgccgttt cgcgacgacg aggggctgtt ctacccgcct cagctctcca
      961 atcccgtcgg cacgttcttg ttctcgcttt taagcttcat gccggaggcg agcgccatgg
     1021 tctccatcag cgcggcaaag tccttttgca gatactcctg cggatcggac ttgagcgtcg
     1081 ccgcgccgaa atggccctgc agcacctcgc gcgcagccgc ggtgaccggc atgggcacgt
     1141 cccattcccg gccgagcgct agaccgagat cgaggtcctt gcgcaaaagc tccggcgtga
     1201 aggtcgtggt ccaatcgagg ttgaccagcg ccggcgactt ataggcggtg aacatcgatc
     1261 ccatcacgcc gttgttcatg aacgcgagga acgcgtggcg gggaacgccc atcttgttgg
     1321 cgagcagcgt gatctcgatc aagttctcga tcactacgcc gagcatgacg ttgtgggcga
     1381 tcttgcagat gcgcgcgagc tcgccatcgc ccacgtagga gacgccgcgc ggcgcgatcg
     1441 cctccagcat cggcgtcacc gtcttgcacg cggcctccgg tccggagatc acggcggaga
     1501 gcttgcccgc cttgatgacc ttggcgttgc cgctcaccgg cgccgcgacg tagtcgcagc
     1561 cgagctgggc gagccggtcg cggatggccg ccgactcctc gactgagatg gtcgagcaat
     1621 cgacgaagat tttcggcagc ttgccgccgt ggccgcttac gctgttcttg ccgaaataga
     1681 cctgatccag atcctttccg gtcgacacga tcgagaacag cacgtcgaca tccttgagct
     1741 ccaagagatt gtcgacgacc ttgccgccca tcttcgccag cggttcggcc ttggcgcgag
     1801 tgcggttcca gatggagaga tcgtagccgg ccttgagcag gcgctcggcc atggggcttc
     1861 ccatgcggcc gacgccgatc cagccgatct tctgcttgtg tgccgccatt gcaactctcc
     1921 ttcatccgca cggggtcgaa ctcgccggtc tcctagcaca cggggaatgc gtttgtcgtc
     1981 acgcttgcgg tacgcgagca cgccggtagg gtgggcaaag gcgcattacg caatcttcat
     2041 gcgtgggaaa atcgcggcgc cttgcccacc ctacaactgc ggcttgccaa aggcccagtc
     2101 ggcgacccgg tggaacagaa ccagcgccgt gcggcaccag atcagcacga tgatgatgcg
     2161 catgagctgg aagccggcga tcagcgtcgc atcgagcccc agcactttgc cggtaagcac
     2221 catctcggcg atgccggcgg gcgccatggc gagaaccatg gtcggcacgg gatagtcggc
     2281 gagccacgca aacgccgccg cgaacagcgc catcgagccg gccgcgaaca gcacgacgag
     2341 acacgaggcc cacagcaggc ggaacagccg ggtgagaaac gcgggcctga actgcgcgcc
     2401 gagcgcgctg ccgatgagga tctgcgccgc gatcaggagg acatcgggca tgcggccctc
     2461 catccagccg agatggctgg cgccggccgc gatgaagagc ggcgccatca gccaggcatt
     2521 gggcgagcgc gtgcgcgata gcaaggtcgc ggtgattccc gacaccacga gcaggccgag
     2581 gatcggcagc cagggcacca cgggaatggc gagcagcgga ttctgggcgc cgccgccgac
     2641 gagggagatc accaggaacg gcgcgaacat cacgatgagc gccaccctgg tcgtctgcgc
     2701 gaccatgatg ggctcgaggt ggccgccgta gtacggggcg atggtcgtcg tttccaccac
     2761 gccgccggga acggtggcga agaatgcggt gacgcggtcg atcccggtga gccgcatgta
     2821 aagcaaccca ccgatggcgc cgacgatggt ggagatgaag gcggcggcga tgatcaacgg
     2881 cagcagcgtg acgagtttcg cgaccacggt ggcggtgaac tgcaggccgg tggaggcgcc
     2941 gaccaccacc gtccccgccg gccgtcccca cgggatgagc cgcaccggtg cgcccgcgag
     3001 cgacagcgcc atagtggtga agagcgcgcc gagcagccac ggcagcggca gatggac
//
LOCUS       DATCWM010000110         2107 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_459666, whole genome shotgun sequence.
ACCESSION   DATCWM010000110 DATCWM010000000
VERSION     DATCWM010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2107
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_459666"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..236)
                     /locus_tag="VIQ50_02015"
     CDS             complement(<1..236)
                     /locus_tag="VIQ50_02015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEY9359182.1"
                     /translation="MGIDTVNLARIDLNLLVHLDALLKERSVTRAAARVGIGQSAMSH
                     NLARLRELFGDELLTRGSEGMRLTPRAVALLEPAR"
     gene            442..>2107
                     /locus_tag="VIQ50_02020"
     CDS             442..>2107
                     /locus_tag="VIQ50_02020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HEY9359183.1"
                     /translation="MLALSIALWLDMPRPYWAMASVYITSNPLTGATRSKALYRMVGT
                     LIGAAGTIALIPNLVDAPELLSLAIALWVGVFLYFSLIDGTPRSYVFMLSGYTVALLG
                     FPILSTPELTFDIVVARVQEIMLGIVCASVVSMLVMPQSVASAIAAKADAWLADACRL
                     GKDVLTDRGSDQERDNERMRLAAAAAEIDQLSRHLDYEAATSANMARGLQRLRQHMLS
                     LLPLLGSIEDRKIALHSHEEASASFVGIRARIARWLEAGGHDGHEADALRAALDEIRP
                     ALEADADWIDITVAGLALRLRNLVDVMQDCRLLREAIADGRNPDQLRLAFISDTLTVA
                     VPHRDHGLALWAGVATALSVLTCCAFWILTGWADGASAALFAALIGSFFAGMDDPLPA
                     FRNFGGVILAVIAINGIYTFGVLPRITTLEVLIAALAPTFLLFGWMAARPATARIGSM
                     VAIYVSVQLALTSSYSADFSSFANSSVALMVGVALTGVVCGIVRLLGAGWIASRLLRS
                     NWSTLAAVAEGTSRQDRVAIASLMQHRLALLATRIAVIPAEARSGAA"
BASE COUNT          340 a          657 c          659 g          451 t
ORIGIN      
        1 cgcgctggct cgagtaaggc caccgcgcgt ggggtcagtc gcatgccctc ggaccctcgc
       61 gtgagaagtt cgtcgccgaa caactcccgc aggcgcgcga ggttgtggct catcgcggac
      121 tgaccaatgc cgacgcgggc cgccgctcgc gtgacgctcc gttccttgag cagcgcatcg
      181 agatgaacga gcagattcaa gtcgatacga gcaagattga cggtatcgat acccattatc
      241 gatcctatct gtttgatcaa tgatcatagc ccgatcatat tctgcggcaa gggagcagac
      301 gggcgaccgg cccgccgccc aagccaacgg agggtcgctg tcgatccgcc gccggacgcc
      361 aaggtcccca tgagcgaacc ttcatcattc tgggctcgac atgccgctct cctctttggg
      421 gtgaggacgt tcgcagcggc aatgcttgcg ctctcgattg cgctctggct ggatatgccg
      481 cgcccctatt gggcgatggc gtctgtttat atcacctcca atccattgac tggggcaaca
      541 cggtcgaagg cgctctatcg catggtggga acgctgatcg gcgcagcagg aacgattgcg
      601 ctgatcccca acctcgtgga tgcacccgaa ctgctcagtc tcgccattgc gctgtgggtg
      661 ggcgttttcc tgtatttttc gctgatcgac ggcaccccgc gcagctacgt gttcatgctg
      721 tccggctaca ccgtcgcgct gctcggcttt cccatccttt caacgcccga gttgacattc
      781 gacatcgtcg tcgcccgcgt gcaggaaatc atgctgggta tcgtctgtgc gagcgtcgtt
      841 tcgatgctgg tgatgccaca gagcgtcgcc tctgcaattg cagcaaaagc ggacgcctgg
      901 ctcgccgatg catgtcggct tggtaaggat gttctgaccg accggggcag cgatcaggag
      961 cgtgacaacg aacgcatgcg ccttgccgcc gcagctgccg agatcgacca gcttagccgg
     1021 catctcgact atgaggccgc tacttccgca aatatggcgc gaggcctgca gcgcctccga
     1081 caacacatgc tgtcgctgct tccgctgctc ggatcgatcg aggaccgcaa gatcgcgctc
     1141 cactcgcacg aagaggcgtc ggcgtcgttt gtcggaatcc gcgcaaggat agcgcgatgg
     1201 ctcgaagcgg gcggtcacga cggacatgaa gcggatgcgt tgcgcgcggc gcttgatgaa
     1261 atccggccgg cgctggaggc cgatgccgat tggatcgaca tcacggtcgc cggcctcgca
     1321 ctccggcttc gcaatcttgt ggatgtcatg caggattgcc ggctgctgcg cgaggcgatc
     1381 gccgatggcc gcaatccgga ccagcttagg ctcgctttca tatctgacac gttgactgtc
     1441 gccgtgccgc accgcgatca tgggcttgcg ctgtgggccg gcgtggcgac agcgctttcg
     1501 gtgcttacct gctgtgcgtt ctggatcttg accggctggg ccgatggcgc atccgccgcg
     1561 ctgttcgcgg ctctgattgg atcgtttttt gccggcatgg atgatccgct tccggcattc
     1621 cgcaacttcg gcggggtgat tctcgccgtc attgcgataa acggaatcta cacatttggt
     1681 gtgttgccgc ggatcacgac gcttgaggtg ttgatcgccg cactcgcgcc gactttcctg
     1741 ctgttcggct ggatggctgc gcggcctgcg accgcgcgca tcggctcaat ggtcgcgatc
     1801 tacgtctcgg tacaactggc gctcacctcg tcctactcgg ccgatttctc ttcctttgcc
     1861 aactccagcg tcgcgctgat ggtgggggtc gcgttgacgg gcgtcgtctg cggcatcgtt
     1921 cgcctgctcg gggccggctg gattgcgagc cggttgctcc gaagcaactg gagcacgctt
     1981 gctgcggtcg ccgaaggcac gtcgcgccag gatcgcgttg cgattgccag tctgatgcag
     2041 catcgcctgg ccctgcttgc cacgcggatc gccgtgattc ctgccgaggc aagaagcggt
     2101 gcagcca
//
LOCUS       DATCWM010000111         2334 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_27893, whole genome shotgun sequence.
ACCESSION   DATCWM010000111 DATCWM010000000
VERSION     DATCWM010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2334
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27893"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..242
                     /locus_tag="VIQ50_02025"
     CDS             <1..242
                     /locus_tag="VIQ50_02025"
                     /inference="COORDINATES: protein motif:HMM:NF023816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9359184.1"
                     /translation="DEPTQGLSLEETDRAVQILKGMLSVGNLSVLLVEHDMEVVFKLA
                     DDITVLHRGRVIADGPPVAVKANATVRSAYLGGSE"
     gene            242..937
                     /locus_tag="VIQ50_02030"
     CDS             242..937
                     /locus_tag="VIQ50_02030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9359185.1"
                     /translation="MLRIEGLHTYYGHGHILQGVNLEIPQGRIAAVLGRNGVGKTTTL
                     RSIIGLAPPRRGRVLLGDRDVAGWPPHRIVRVGVGYVPEGRMIFPDLTVVENLQVAQR
                     VPAKQWSMERLFTLFPSLAERRRNKGSQLSGGEQQMLAVARALVTDPKVMLLDEPSQG
                     LAPLVVEELRRLIGRLRDEGVSLLLVEQNLKLAEAVADVIYVMVKGKMVYDAPLERFR
                     TEREDVKAKYLTL"
     gene            980..1756
                     /locus_tag="VIQ50_02035"
     CDS             980..1756
                     /locus_tag="VIQ50_02035"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9359186.1"
                     /translation="MSGETDFETRKVLVTGGSRGIGRAVCLELARRGADVAFIYRNRD
                     AEAEATAAEIRALGRRALALKTDLAHASGVGAAIDRAAGEFGRLDVLVQAAGAMGAWH
                     ETAELSTDDWDHYVAVDLSGAFYAIRASLPHLRKAGGGAIVAISSIAAQMCQPRNVQG
                     AAAKAGLEAIVRVVAREEGRRGIRANAVAVGLTDTEMGRMAFAEWGPETAERVIRSIP
                     LRRIGTPEEVARVVCFLAGPDAAYITGKVLQVDGGQIIAA"
     gene            1818..>2334
                     /locus_tag="VIQ50_02040"
     CDS             1818..>2334
                     /locus_tag="VIQ50_02040"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY9359187.1"
                     /translation="MAFETRLTTAMAARWRGAGLWSDKTFATVLARRLRETPDREALT
                     DGTRRLTYRELAHGIDRMAARLRALGIGQGDVVTIQLPNWIEFAFVFFALERLGAVAV
                     TVSMDFRSRELEYIMRFAGSKMLVCCAQFRDFDHVAMAEELRPRLPALACIGVVRGAP
                     RPGMASLDDIAA"
BASE COUNT          387 a          712 c          829 g          406 t
ORIGIN      
        1 ttgacgagcc gacccagggc ctctcgctcg aggagaccga tcgggccgtg cagattctga
       61 aggggatgct cagcgtcgga aatctcagcg tgctcctggt cgagcacgac atggaagtgg
      121 tgttcaagct cgctgacgac atcacggtcc tgcatcgcgg tcgcgtgatc gccgatggac
      181 cgcctgtcgc tgtcaaggcc aatgcgaccg tgcgtagcgc ctatctcgga gggtccgagt
      241 gatgctgcgc atcgaaggcc ttcacaccta ttacggccat gggcacatcc tccagggcgt
      301 gaatttggag attccgcaag gccgcattgc ggccgtgctc ggccgcaatg gcgtcggcaa
      361 gaccaccacg ctgcgctcga tcatcggctt ggcgcccccg cggaggggcc gagtgctact
      421 cggcgaccgg gacgtcgcgg gctggccgcc gcatcgcatc gttcgggtcg gcgtcggcta
      481 cgtgccggaa ggacgaatga tctttccgga cctgacggtc gtggaaaacc tccaggtggc
      541 gcaacgtgtg ccggcgaagc aatggtcgat ggagcgcctt ttcacgctat tcccctcgct
      601 cgccgagcgg cggcggaaca aggggtcgca gctttccggg ggcgaacagc agatgctcgc
      661 tgttgcgcgc gcgctcgtca ctgatcccaa ggtcatgctg ctcgacgaac cctcgcaagg
      721 cctggcgccg ttggtggtgg aggagctcag gcggctgatc gggcggctgc gggacgaggg
      781 ggtaagcctc ctgctggtcg agcagaactt gaaactcgcc gaggccgtgg ccgatgtgat
      841 ctacgtcatg gtcaagggga agatggtcta tgacgccccg ctcgaacggt tccggaccga
      901 gcgcgaggac gtaaaggcga agtacctcac attgtaatgt tcacgatcga acgcgtctgg
      961 ggaaggctgt gatcaggcga tgagcggcga gaccgatttc gaaaccagga aggtcctcgt
     1021 gaccggcggc agccgcggca tcgggcgtgc ggtgtgcctc gagcttgcgc gccggggtgc
     1081 cgacgtggcg ttcatctatc gcaatcggga tgccgaggcc gaggcgacgg cggctgagat
     1141 tcgcgcgctc ggtcggcgcg cgctggcgct caagaccgat cttgctcacg cctctggtgt
     1201 cggcgccgca atcgaccgcg ccgcgggcga gttcggaagg ctcgatgttc tggtgcaggc
     1261 agccggtgcc atgggcgctt ggcacgagac cgcggagctc tcgaccgacg attgggacca
     1321 ctacgtggcg gtcgacttgt cgggggcgtt ctacgcgatt cgagcgtccc tgccccatct
     1381 acgcaaggct ggcggtggcg cgatcgtggc catctcgtcg atcgccgcgc aaatgtgcca
     1441 gccgcgcaac gtccaaggag ccgcggcaaa ggccggactg gaggcgatcg tgcgcgtggt
     1501 ggcgcgcgag gagggaaggc gcggcattcg cgcgaacgcc gtggccgtcg gtttgacgga
     1561 caccgagatg gggcgcatgg ccttcgccga atggggaccg gagaccgccg aacgggtcat
     1621 tcgcagcata ccattgcgcc ggatcggcac gcccgaagag gttgcgcgcg tcgtgtgctt
     1681 tctggccggg cccgacgcgg cctacatcac cggcaaggtg ctgcaagtcg atggcgggca
     1741 gatcatcgcg gcataagccc acatcgcaac gaagaagaat gcgtcatggc gtctgttgtc
     1801 caggcaagga aggttgcatg gcattcgaaa cgcgtctgac gacggcgatg gccgcgcgct
     1861 ggcgcggcgc cggcctatgg agcgacaaaa ctttcgcgac tgtgctggcc cgccgcctgc
     1921 gcgagacgcc cgatcgcgag gcgctgaccg acgggacgcg ccggctcacc taccgcgaac
     1981 tcgcgcatgg gatcgatcgc atggcggccc ggttgcgcgc gctcggcatc ggtcaagggg
     2041 acgtcgtgac gatccagctg ccgaactgga tcgagtttgc gtttgtgttc ttcgcgttgg
     2101 agcgcctcgg cgcggtggca gtgacggtca gcatggactt ccgcagccgg gagcttgaat
     2161 acatcatgcg tttcgccggc agcaagatgc tggtctgctg tgcgcagttc cgcgatttcg
     2221 atcacgtcgc tatggccgaa gagcttaggc cgcggcttcc tgcgctcgca tgtatcggcg
     2281 tcgtccgcgg cgctccgcgc ccgggcatgg cgagtctcga cgacatcgcc gccg
//
LOCUS       DATCWM010000112         4828 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_162883, whole genome shotgun sequence.
ACCESSION   DATCWM010000112 DATCWM010000000
VERSION     DATCWM010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4828
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162883"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(153..1496)
                     /locus_tag="VIQ50_02045"
     CDS             complement(153..1496)
                     /locus_tag="VIQ50_02045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012318463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-CoA decarboxylase"
                     /protein_id="HEY9359188.1"
                     /translation="MLQSIAERGRALIDRTRDRRGVAEQRSESLAQLCEDLLSGRGEA
                     SGVALARELLSRYAELTTGPRIAFFEALASRFGADRNRLSAAASAWLTAPSDAAASKV
                     HRASEPRRLELFRRLNLAPGGTAALVRMREQLLDAMNHRDDLAVIDDDFLHLFSSWFN
                     RGFLVLKSINWSTPAHLLEKIIRYEAVHTIRDWNDLRARVDSPDRRCYAFFHLALADE
                     PLIFVEVALTRGNPAAIDRILSAKRDPVEPERATTAVFYSISNCQRGLAGVSFGHFLI
                     KQVVEEVSRELPRLATFVTLSPAPNFAEWLKTERAKEGSVALGAEDRAALAALDRPNW
                     WRDEASAEMVHEPLLRAAAWYYLRARSPRGTPLDSVARFHLGNGARLERLNFLADTSE
                     RALQQSHGLMVNYLYDLEHIEQNHEAYAQQHAIVAASAVTRLARAPARDIVPADD"
     gene            complement(1599..2678)
                     /locus_tag="VIQ50_02050"
     CDS             complement(1599..2678)
                     /locus_tag="VIQ50_02050"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEY9359189.1"
                     /translation="MRLPRYVHAFVDRHGRPRFYFRRAGFEPKPLRGLPWSADFMADY
                     EAALIGQPLSVGADRARPGTMAALALSYFASPQFRGMRLSSQKIYRGLIERFCREHGD
                     KRVALLGREHIVRLMACHADQPNVANALRRVLRAMLRHAMDINLRRDDPTRDVQAIRV
                     KSTGHHSWTDAEIAQFERRHPVGSRARLALALLVYTGQRRGDVIRMGPQHERDGALHV
                     KQEKTGAELAIPIHPELTAVIAATPSGHLTFLTTRFGRPFEGSGFSHWFRDACDQAGL
                     PHCSPHGLRKAAARRLAEAGCTAHEIGAITGHASLAELVRYTRAADQRRLAEAAMAKT
                     RKSSGKPGQKFANRGENVLKIKGQK"
     gene            complement(2675..2860)
                     /locus_tag="VIQ50_02055"
     CDS             complement(2675..2860)
                     /locus_tag="VIQ50_02055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009466294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359190.1"
                     /translation="MARAPSTFRQQDVTRAVKAVTAAGVHIARIEIDKSGKIVIITAD
                     QPDRLGNMAEANEWDRV"
     gene            complement(2902..3660)
                     /locus_tag="VIQ50_02060"
                     /pseudo
     CDS             complement(2902..3660)
                     /locus_tag="VIQ50_02060"
                     /inference="COORDINATES: protein motif:HMM:NF024547.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3987 domain-containing protein"
     gene            complement(3683..4066)
                     /locus_tag="VIQ50_02065"
     CDS             complement(3683..4066)
                     /locus_tag="VIQ50_02065"
                     /inference="COORDINATES: protein motif:HMM:NF020811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA primase/polymerase"
                     /protein_id="HEY9359191.1"
                     /translation="MTAAPPDNPNLTAALSLAAAGPPVFPAGPDKRPLLTGWQEKAST
                     EPEQIRDWWRAHTAALPAVFVGRADLVVIDCDRHPGGSDGIKAFNRLVSANGGNLPNV
                     PVTKTARGGAHLLAVLLCVAGRTGT"
     gene            complement(4138..4533)
                     /locus_tag="VIQ50_02070"
     CDS             complement(4138..4533)
                     /locus_tag="VIQ50_02070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359192.1"
                     /translation="MTREEVFPSKYLKASDLKGKPRIVTIESAPYETLKGLDGKENQK
                     IVVYFENVVKSLPLNATNFDAVCDATGCPDTEDWPGQQIELYPTKTTMGGKTVDCIRI
                     RPPSGSRRAAAVPPPPPPPISEMNDEIPW"
     gene            complement(4602..>4828)
                     /locus_tag="VIQ50_02075"
     CDS             complement(4602..>4828)
                     /locus_tag="VIQ50_02075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359193.1"
                     /translation="LGAVLDRYARIPAHIPRALGADALRPQIHRIKISHSVTSDIADG
                     RQWPPPDPDVLWVVVRRAEGCTVWRSIQLA"
BASE COUNT          885 a         1479 c         1549 g          915 t
ORIGIN      
        1 cgcttcgccg gagaaccgcg tcactcgcgg ggctgtcgtg ccggtgtacg gacgatcgta
       61 gcgcacctgt cccggacgca gcgcagcacg aagtggcgcg ctacagatcc gggacctttc
      121 cgcggtccga gccctgtgag ccggattagc tgttagtcgt ccgccggcac gatatcccgc
      181 gccggcgcgc gcgcgaggcg tgtcaccgcg cttgcagcca cgatcgcgtg ttgctgtgcg
      241 taagcttcgt ggttctgctc gatgtgctcg agatcgtaaa gataattgac catcaagccg
      301 tgtgattgct gcagtgcccg ctccgaggtg tcggccagga agttgagccg ttcgagccgc
      361 gcgccgttgc cgagatggaa gcgcgcgacc gaatcgagcg gcgtgccgcg gggcgagcgc
      421 gcacgcaggt aataccaggc ggcggcgcgc aacagcggct cgtgaaccat ctcggcgctc
      481 gcctcgtcgc gccaccagtt cgggcgatcg agcgcggcga gcgcggcgcg atcctcggcg
      541 ccgagcgcca ccgagccttc cttggcgcgc tcggttttga gccattcggc gaaattcggc
      601 gctggcgaca acgtgacgaa cgtcgccaag cgcggcagtt cgcggctgac ttcctcgacc
      661 acctgcttga tgagaaaatg gccgaaggac acgccggcga gcccgcgctg gcagttggag
      721 atcgaataga acaccgccgt ggtcgcgcgc tcgggctcga ccgggtcgcg cttggccgac
      781 aggatccgat cgatcgcggc ggggttgccg cgggtgagcg cgacctcgac gaagatcagc
      841 ggttcatcgg ccagcgccag atggaagaag gcgtagcaac gccgatcggg cgaatcgacc
      901 cgcgcgcgca ggtcgttcca gtcgcggatc gtgtgcaccg cctcgtagcg gatgatcttc
      961 tcgagcaggt gcgccggggt cgaccagttg atgctcttga gcaccaggaa gccgcggttg
     1021 aaccaggatg agaacaggtg gaggaagtcg tcgtcgatga cggcgagatc gtcgcgatga
     1081 ttcatcgcgt cgagcagttg ctcgcgcatg cgcaccagcg ccgcggtgcc gcccggggcg
     1141 agattgaggc ggcggaaaag ctcgagccgt cgcggctcgg atgcgcgatg caccttggag
     1201 gcagccgcgt cggagggtgc cgtcagccaa gcgctggccg cggcgctgag ccggtttcga
     1261 tcggcgccga agcggctcgc cagcgcctcg aagaaggcga tgcgcggtcc ggtcgtcaat
     1321 tccgcgtagc gcgagaggag ttcgcgcgcg agcgccacgc cggaggcttc gccgcgaccg
     1381 gagaggagat cctcgcagag ctgcgccagg ctttccgagc gctgctcggc gacgccgcgc
     1441 cggtcgcgcg tgcggtcgat gagcgcgcgg ccgcgctcgg cgatcgactg cagcatgtcg
     1501 ctgaaggagg aggtgctcac ggggggtaaa tctctcgcgg catcggatca tagatagggt
     1561 tgccgtgacg aatcacaaat catgccaaat tgtgctagtc acttttggcc cttgatcttc
     1621 aagacatttt cgccccgatt ggcaaacttt tggcccggtt tgccactcga ttttctcgtt
     1681 ttggccatgg ctgcttcagc cagccggcgc tgatccgccg ccctagtgta ccgcacaagc
     1741 tcagcaaggc tagcgtgtcc ggtgatggca ccaatttcgt gggcggtaca gccggcctcg
     1801 gccaaacgac gggccgccgc tttgcgcaat ccatgcggcg aacagtgcgg caagccagcc
     1861 tgatcacagg catcgcgaaa ccagtgacta aaacctgatc cctcaaacgg ccggccaaat
     1921 cgggtggtca aaaacgtcag gtgcccactt ggggtggcag caatgaccgc cgtgagctcc
     1981 gggtggatcg gaatagcaag ctcagcgccg gtcttttcct gtttgacgtg cagtgcgccg
     2041 tcacgttcgt gctgcggccc catgcggata acgtcaccgc ggcgttggcc ggtatagacc
     2101 aacagcgcca gcgccagccg tgcacgagaa ccgaccggat ggcgccgctc gaactgggcg
     2161 atttcggcgt ctgtccagct gtggtggccg gtgctcttga cgcgtatagc ctgcacatca
     2221 cgtgttgggt catctcggcg aagattaata tccatcgcgt gtcgcagcat ggcccgcaac
     2281 acccggcgca aggcgttggc aacattaggt tgatcggcat ggcaggccat cagtcgcacg
     2341 atgtgctcgc gccccaagag cgccacgcgt ttatcgccgt gttcccggca aaaccgttcg
     2401 atgaggccac gataaatttt ttggctgctc aaacgcatcc cacggaattg cggcgacgca
     2461 aaataactca gcgccagcgc ggccatcgtc cccggcctcg cccggtcagc accaaccgaa
     2521 agcggctggc caatcaaggc tgcttcgtaa tccgccatga agtcggccga ccaaggcaag
     2581 ccacgtaacg gtttgggctc aaagccagcg cgccggaaat aaaaccgagg ccggccatga
     2641 cggtccacga aagcatgaac atagcgcgga agcctcaaac gcggtcccat tcgttcgcct
     2701 ccgccatgtt gccaagccta tcaggctggt cagcggtaat gatgacgatc tttcctgact
     2761 tgtcgatttc gatgcgggcg atatgcacac cagccgcagt gacggctttg accgctctgg
     2821 tcacgtcttg ctgccggaat gtggagggcg cgcgcgccat ggtatctacc cgtgaggcct
     2881 tctcattggc ggggaatccc gtcagcggcc caaggctttc gtggcgctcc aagccctgct
     2941 gggaatctct cccaggtgcc cgggaaccgc agcctctgtg tcagaaaggt cagaaaggtc
     3001 ggaaaggtgc tcaccgtcat gacaggcacc cctttctgac ctttccgacc tttctggcgt
     3061 tggggcccca gaaaaaagta gcgggttgac ccgccaccga tggatggcgc ggccgcccgt
     3121 cttggtcgtt aatagcttca gccaaccggc acgcaccaaa ccatcgagca gggtgcgcgt
     3181 ctgttcagcg tcaagccgac ggccgagcgc ctcacgacgg atatccagca gcgatacctc
     3241 ggtcttctga tttgctcgaa tccaacacag cgcccggcgg gcgttgttat gcttttcagt
     3301 cagcccaatt tgccggagcg ccgcccggct gtgcggccag aaataatctc gccacagctg
     3361 cacagcggct tcaacgtatt gttcagctat ggattgcggc tcggtgccgc ccagcatagc
     3421 ccaatccagg taagccagcg tggcactcag tctcagcaca tgggtggcgc ccttggccgc
     3481 ccattcccgt tctcgcccgt ccaactctgc ctttgcttgt gccagaaagg cccgaaaggt
     3541 ctcgaaggcc gcgaggccct caggtgacag gtccacggtt cgtggtgcaa agacgaagtc
     3601 ctcgccggtg ggcaaatcga cgatgcgcgt taacgcgttc tgaatttcag gctcaatttc
     3661 ggcaacctca ttggaaagcg gcctatgtgc cggttcttcc ggccacgcaa agaagaaccg
     3721 ctaacaagtg agcaccgccg cgcgccgtct ttgtcaccgg cacgttgggg aggttgccgc
     3781 cattggcgct cacaagccga ttgaaggctt tgatgccgtc gctgccgcca ggatgtcgat
     3841 cgcagtcgat gacgacgagg tcagcgcgcc cgacgaagac tgccggcagc gcggcagtat
     3901 gagcgcgcca ccagtcgcgg atctgctccg gctcggtgct cgccttttcc tgccagccag
     3961 ttagcaatgg ccgcttgtct ggtcccgctg ggaaaacagg cgggccggcg gcggccaggc
     4021 tgagcgcggc agttagattt ggattatctg ggggagctgc cgtcacagaa aaggccaggt
     4081 gtattcacgc tgttctggaa gttgtcgagg ccgcgcggat cagacgcggc ctcgatgtca
     4141 ccacgggatc tcgtcgttca tttcactgat aggcgggggc ggcggtggtg gtaccgctgc
     4201 cgcccgtcgt gaaccggaag gcggacggat gcggatgcaa tccaccgtct ttcctcccat
     4261 agttgttttg gtcgggtaca gttcgatctg ctgtcctggc cagtcttccg tgtcaggaca
     4321 gcccgtggcg tcgcaaacgg cgtcgaagtt cgttgcgttc aacggcagcg atttgacgac
     4381 gttctcgaag taaacaacga tcttttggtt ttctttcccg tccagacctt taagcgtctc
     4441 gtatggtgcg ctctcaatcg tgacgatccg cggtttgcct ttgaggtcag aggctttcag
     4501 gtatttgcta ggaaaaactt cctctcgtgt catgagatta acctttcagg tttagttgct
     4561 gcctattgga gaattgcgaa gtccgcggca gcgggtcgga cttaagcaag ctggatcgag
     4621 cgccaaaccg tgcagccctc ggcacgtcgc acgacgaccc aaagaacgtc ggggtcaggt
     4681 ggcggccatt gccgcccgtc cgcgatgtcg ctggtgacac tgtgtgaaat cttgatgcga
     4741 tgaatctgcg gccgcagcgc gtcggcgccg agcgcgcggg ggatatgcgc ggggatacga
     4801 gcgtaccgat cgagtaccgc gccaagtg
//
LOCUS       DATCWM010000113         4177 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_125115, whole genome shotgun sequence.
ACCESSION   DATCWM010000113 DATCWM010000000
VERSION     DATCWM010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4177)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4177)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4177
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125115"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..582)
                     /locus_tag="VIQ50_02080"
     CDS             complement(<1..582)
                     /locus_tag="VIQ50_02080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007614663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HEY9359194.1"
                     /translation="MQIRVGFQMVYEFAARTPVVLMLNVHPSRATDMIEPDQLRITPA
                     LPVTRYLDAFGNLCSRLVAPAGELTISTDALIADSGLPDPFEPTERAHEIAELPHDAL
                     VFLLGSRYCETDRLMDTAWSRFGATPPGWPRVQAICDFVHSHVSFGYHHARATRTAAD
                     VVVERRGVCRDFAHLAITLCRCMNIPARYCTGYL"
     gene            complement(878..2089)
                     /locus_tag="VIQ50_02085"
     CDS             complement(878..2089)
                     /locus_tag="VIQ50_02085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018259567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY9359195.1"
                     /translation="MDFTLPPEIEDIRARTSRFVEEHVLSLEADHGNYDDHENIRLDV
                     LRTVQAKARAEGLWAPQAPKEYGGMGLPVVAWAAMYEEANRSIFGPLAFNCAAPDDGN
                     MNLLARVGTPAQKDKWLKPIVEGSVRSSFVMTEPAPGGGSDPGMIRTRAEKKGDGWLV
                     HGHKWFITGAGVADHFILMARTSQDPRRGLTAFLYHRDQPGWRILRRIPIMGPEEHGG
                     HCELVFEGLEVPDENVLMKVGDGLRVTQIRLGPARLTHCMRWLGLAKRSMEIAQAYVA
                     DREGFGMRLADRESVQIKLGEVAHQIQIGRLLVMHAAWKLDQGDRARKEVSMAKLHVA
                     DTLHQAADVAIQLNGARGYSKDTILEWIYRYARQARLVDGASEVHNMVLARFMREEGS
                     DFWRWSAGNRV"
     gene            complement(2125..2901)
                     /locus_tag="VIQ50_02090"
     CDS             complement(2125..2901)
                     /locus_tag="VIQ50_02090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010683557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9359196.1"
                     /translation="MTAAELFDVKGRVALVTGASSGLGLRFAELLAGEGAAVALVARR
                     ADRLAAVKARIEQAGGRAVAISADVTDRRAMVRAFDEAEKAFGTVTILVNNAGVVHSG
                     RVMELPEQEWRRVVGTNLDAVFLWAQEAARRMLSSGNGGAIVNIASVLGFGVAKGTAA
                     YAVAKAGVIQLTKALGLELAFKGVRVNAIAPGWIVTDINRDYLASEQGAAIKREIPVG
                     RFGEERDLDGALLLLVSDAGRFIAGTTIVVDGGQMVALRG"
     gene            3032..3652
                     /gene="nthA"
                     /locus_tag="VIQ50_02095"
     CDS             3032..3652
                     /gene="nthA"
                     /locus_tag="VIQ50_02095"
                     /EC_number="4.2.1.84"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018822 - nitrile hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0050898 - nitrile metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrile hydratase subunit alpha"
                     /protein_id="HEY9359197.1"
                     /translation="MAQHEHDEHGSELSETQLRVRALETVLTEKGYIDPAALDLIIEA
                     YETKIGPHTGARVVAKAWHDPAFKRALLDDGSKAVRTLGHESRVGDHLVAIENTPARH
                     NMVVCTLCSCYPWDVLGLPPVWYKSAPYRSRAVKDPRGVLADFGVALPASTEIRVWDS
                     TAETRFLVLPMRPSGTEGWSEERLTQLVTRDAMIGTGLPKRPDEVT"
     gene            3652..>4177
                     /gene="nthB"
                     /locus_tag="VIQ50_02100"
     CDS             3652..>4177
                     /gene="nthB"
                     /locus_tag="VIQ50_02100"
                     /EC_number="4.2.1.84"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007610314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018822 - nitrile hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0050898 - nitrile metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrile hydratase subunit beta"
                     /protein_id="HEY9359198.1"
                     /translation="MNGVHDMGGMDGFGKVEPEPKEPVFHAPWEGRVLAMQRAMGYAG
                     AWPIDASRFAQERLAPQAYLGASYYQRWALAMERNLVERGYAETDELASGRALRSGKQ
                     LARKLTSDVVTQGMTRGSFYRQAQAPARFKPGDRVRTKNIHPPTHTRLPRYARGRLGV
                     IELVHGCHAFPDTMA"
BASE COUNT          727 a         1392 c         1334 g          724 t
ORIGIN      
        1 caggtagcca gtgcagtagc gcgccgggat gttcatgcag cgacacagcg tgatcgccag
       61 atgggcaaag tcgcggcaca cgccgcggcg ctcgactacg acgtcggcgg cggtcctggt
      121 cgcgcgggcg tgatggtaac cgaaggagac atgggaatga acgaaatcgc agatcgcctg
      181 cacgcgcggc cagcccggcg gcgtcgcgcc gaagcgggac caagccgtat ccatgagacg
      241 atcggtctcg cagtatcggc tgccgagcag gaagaccagc gcgtcgtgcg gcagttccgc
      301 gatctcgtgc gcgcgctccg tcggttcgaa cgggtcgggc aggcccgaat ccgcgatcag
      361 cgcgtccgtg gaaattgtga gctcgcctgc cggcgccacc agtcggctac agagattgcc
      421 gaacgcatcc agatatcgtg tcaccggcaa cgcgggtgtg atgcgaagct ggtcgggctc
      481 gatcatgtcg gtcgcccgcg acgggtgcac gttgagcatc agcaccaccg gcgtgcgcgc
      541 ggcaaactcg tagaccatct ggaagccgac gcgaatctgc atggatagca tctcgatctc
      601 taacaatggg gaattggcac aaatcgcgat gtcgaagaac gttctctcgt tcgcggccgg
      661 ctccgataca ggaatatagg gacaagagcc agctattttt agccatgcat tgcaactatg
      721 actttgccac tactttgggc agctcatgaa tgaactcaac gccctgttat ttgggatgat
      781 ttctttttaa caatgttgtt ttcggcattt atctatcccc tgcccgcaca tgcgcattta
      841 ttcggcttgc ctaaacaagc agcatcgccc ccgtctctca tactctgttc cccgcgctcc
      901 aacgccagaa gtcgctgccc tcctcgcgca tgaagcgcgc cagcaccatg ttgtgcactt
      961 cggaagcgcc gtcgacgagg cgcgcctgac gggcgtagcg atagatccat tccagaatcg
     1021 tgtccttgga atagccgcgc gcgccgttga gctgaatcgc gacgtcggcc gcctgatgca
     1081 acgtatcggc gacgtgaagc ttggccatgg agacctcctt gcgcgcacgg tcgccctgat
     1141 cgagcttcca agccgcgtgc atcaccaaca gccgcccgat ctgaatttga tgcgccacct
     1201 cgccgagctt gatctgcacg ctctcgcgat cggcgagccg catcccgaag ccttcgcgat
     1261 cggccacgta ggcctgcgcg atctccatcg agcgcttggc gagcccgagc cagcgcatgc
     1321 aatgggtgag ccgcgcgggc ccgagtcgga tttgggtgac gcgcaatccg tcgccgacct
     1381 tcatcagcac gttctcgtcg ggtacctcga gcccttcgaa gacgagctcg cagtgtccgc
     1441 cgtgctcctc cggccccatg atgggaatgc ggcgcaggat gcgccagccc ggctggtcgc
     1501 ggtgatagag gaaggcggtg aggccgcgcc gcgggtcctg cgacgtgcgc gccatcagga
     1561 tgaaatgatc ggcgacgccc gccccggtga tgaaccactt gtggccgtga acgagccagc
     1621 catcgccttt cttctccgcg cgggtgcgga tcatgccggg atcggagccg ccgccgggcg
     1681 cgggctcggt catgacgaac gaggagcgta cgctgccctc gacgatgggc ttgagccatt
     1741 tgtctttctg cgccggcgtt cccacccggg cgagcaggtt catgttgccg tcgtcgggcg
     1801 ccgcacaatt gaaggcaagc ggaccgaata tcgagcgatt ggcctcctcg tacatcgcgg
     1861 cccaggccac gaccggcagc cccatgccgc cgtactcttt cggtgcctgc ggcgcccaca
     1921 ggccttcggc cctggctttg gcctgcacgg tgcgcagcac gtcgaggcgg atgttctcgt
     1981 gatcgtcata attgccgtga tcggcttcga gcgacagcac gtgctcctct acgaagcggc
     2041 tcgtgcgcgc acggatgtcc tcgatctcgg ggggaagcgt aaagtccatg ccagcgtcct
     2101 tcgcttcggc ggatgatgcg tcgctcaccc tcgcaaagcc accatttgtc cgccatcgac
     2161 gacaatggtg gtgcccgcga tgaagcggcc ggcatcggag acgagcaaga gcagcgcacc
     2221 atcgagatcc cgctcctcgc cgaagcgccc cacggggatt tcgcgtttga tcgcggcgcc
     2281 ctgctcgctt gcgagataat cgcggttgat atcagtgacg atccacccgg gggcgatggc
     2341 gttcacgcgc acacccttga aggcaagctc gagtcccagc gccttggtga gctggatgac
     2401 gccggctttc gccaccgcgt aggccgccgt gcccttggca acaccgaagc ccagcaccga
     2461 cgcgatgttc acgatggcgc caccattgcc ggaggagagc atccgccgcg ccgcttcctg
     2521 cgcccataag aacaccgcgt cgagattggt gccgaccacg cgccgccatt cctgttccgg
     2581 cagctccatc acgcggccag aatgcacgac gccggcattg ttaaccagga tggttacggt
     2641 gccgaacgcc ttctcggctt catcgaacgc gcggaccatc gcccggcgat cggtgacgtc
     2701 ggccgagatc gccaccgcgc ggccgcccgc ctgttcgatg cgggccttga ccgcagcgag
     2761 ccgatcggcg cgacgcgcca ccagcgccac cgcggcaccc tcccccgcca gcagctcggc
     2821 gaagcgcagg ccgagtccgc tcgacgcgcc ggtgacgagc gcgacgcggc ccttgacgtc
     2881 gaagagctcc gctgcagtca tcggacctcg cgtggcagaa cctcgtgtca tagggcgcgc
     2941 tgacgccgta gcgcctaccc tcgacttagc gctcggcggg gaggatactg catcatccgc
     3001 ccgaatgaac aatgcattca caggtttccc catggcccag cacgagcatg atgagcacgg
     3061 ctcggagctc tccgagacgc agctgcgcgt gcgcgcgctg gagacggtcc tgaccgagaa
     3121 gggctacatc gatcctgccg cgctcgatct catcatcgaa gcctatgaga ccaagatcgg
     3181 tccgcacacc ggcgcgcgcg tggtggcgaa ggcgtggcac gacccagcgt tcaagcgcgc
     3241 gctgctcgac gacggctcca aggcggtgcg cacgctcggt catgagagcc gcgtcggcga
     3301 ccatctcgtc gcgatcgaga ataccccggc gcggcacaac atggtcgttt gtacgctatg
     3361 ctcttgctat ccgtgggacg tgctcgggct gccgcccgtt tggtacaaat ccgcgcccta
     3421 tcgctcgcgc gcggtaaagg atccgcgcgg ggtgctcgcc gacttcggcg tcgcgctgcc
     3481 cgcgagcacc gagatccgcg tgtgggattc gacggcagaa acccggtttc tcgtgctgcc
     3541 gatgcgaccg tccgggacgg agggttggag cgaggagcgc ctcacgcaac tggtcacccg
     3601 cgatgcgatg atcggcacgg ggctccccaa gcggccggac gaggtcacct gatgaacggt
     3661 gttcacgaca tgggcggcat ggacgggttc ggaaaggttg agcccgagcc gaaagagccc
     3721 gtctttcatg ctccgtggga ggggcgcgtg ctggcgatgc agcgtgccat gggctatgcc
     3781 ggagcgtggc ccatcgatgc ctcccgcttc gcgcaggagc ggctggcccc gcaggcctat
     3841 ctcggcgcct cctattacca gcgctgggcg ctcgccatgg aacgcaacct cgtcgagcgc
     3901 ggctacgccg agaccgacga gcttgcttcc gggcgtgcct tgcgctcggg caagcagctc
     3961 gcgcgcaagc tcacgtccga cgtcgttacc caggggatga cgcgcggctc gttctatcgg
     4021 caggcgcagg cacctgcccg ctttaaaccg ggcgaccgtg tgcgcaccaa gaacatccat
     4081 ccgcccacgc acacgaggct gccgcgctac gcgcgcgggc ggctcggcgt gatcgagctg
     4141 gtgcatggct gccacgcgtt tccggatacg atggcca
//
LOCUS       DATCWM010000114         2312 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_535352, whole genome shotgun sequence.
ACCESSION   DATCWM010000114 DATCWM010000000
VERSION     DATCWM010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2312)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2312)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2312
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_535352"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..938)
                     /locus_tag="VIQ50_02105"
     CDS             complement(<1..938)
                     /locus_tag="VIQ50_02105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008839696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HEY9359199.1"
                     /translation="MNPFSYERASDIASACASAARPAAKFIAGGTNLVDLMKLQIEAP
                     GQLVDITRLPLDRIEETAEGGLRIGALVSNSAAAADMRVRRRYPLLAQAILAGASTQL
                     RNKATTGGNLLQRTRCPYFYDTTKPCNKRAPGSGCAALEGLNRMNAVLGVSDNCIAAH
                     PSDMAVAMTALDAVVETVAPDGSARVIPIDELYRPPGNTPHIETVLESGELIVSVLLP
                     APPAGRQVYRKVRDRASFAFALVSVAAVLDVDGERVRAARVAFGGLSYKPWRSGEAED
                     ALVGAPATRASFDAAGVAALKDARGYGHNDFKIPLAR"
     gene            complement(935..1576)
                     /locus_tag="VIQ50_02110"
     CDS             complement(935..1576)
                     /locus_tag="VIQ50_02110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018098835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEY9359200.1"
                     /translation="MNDLLKLESKATRRGFLKTTGAATLVLASSPALAETAETVPQQS
                     EQVRLTINGRPYALNLDPRTTLLDTLREHLGFTGSKKGCDQGQCGACTIIVNGQRINS
                     CLALAVMHDGDEITTIEGLADEGVLHPMQAAFVRHDGFQCGYCTPGQICSAVALLSEH
                     RAGWSSYATADVATVPALTDAEIAERMSGNICRCSAYPNIVAAIREVAKEGSQ"
     gene            complement(1632..2252)
                     /locus_tag="VIQ50_02115"
     CDS             complement(1632..2252)
                     /locus_tag="VIQ50_02115"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY9359201.1"
                     /translation="MDEALTYGGSIRRLWVGEAELYRGHLLHLDAESRRNRFGGAVSD
                     DFIRGYCEPRALSGAIIYGFFVDDVLRGAAELRLLEPAGDAEVALSIERAWQSQGVGT
                     ALLEHLLLAASNRRINRLHVLCLAENGCMQHLARKFDAELSIQSGSVVGEMKAPHPTP
                     ISVMRELVADSADLALAILHVPSQLAKRLERMSGRAERLMPVDNWR"
BASE COUNT          397 a          746 c          757 g          412 t
ORIGIN      
        1 cgggcaagcg ggatcttgaa atcattgtgg ccgtaaccgc gcgcgtcttt gagcgcggct
       61 acgccggcgg cgtcgaagga tgcgcgggtt gccggtgcgc cgacgagcgc atcctcggcc
      121 tcccccgacc gccacggctt ataggacaag ccgccgaatg cgacgcgcgc cgcgcgcacc
      181 cgctcaccgt ccacgtcgag aaccgccgcc accgaaacca gggcgaaggc gaaggacgcg
      241 cggtcgcgga ccttgcgata gacttgccgc ccggcgggcg gggccggaag cagcaccgaa
      301 acgatcagct cgcccgactc gagcaccgtc tcgatgtgcg gcgtgttgcc gggcgggcgg
      361 tacagttcat cgatcggaat aacgcgcgcc gacccgtcgg gcgccacggt ctcgaccacg
      421 gcatcgagcg ctgtcattgc caccgccatg tcggagggat gtgcggcaat gcagttatcg
      481 ctcacaccga gcaccgcgtt catccggttg aggccctcga gcgccgcgca acccgatcca
      541 ggcgcgcgct tgttgcaggg cttggtcgtg tcgtagaaat aagggcagcg cgtgcgttgc
      601 agcagattgc cgccggtggt ggctttgttg cgaagctggg tcgatgcgcc ggccaggatc
      661 gcctgtgcca gtaacggata ccggcggcgc acgcgcatgt cggcggcagc cgcgctgttg
      721 ctgaccaacg cgccaatgcg caagccgcct tccgccgtct cttcgatgcg atcaagcggc
      781 agccgggtga tgtcgacaag ctggcccggc gcttcgatct gcagcttcat gaggtcgacg
      841 agatttgtgc ccccggcgat gaacttcgcg gcgggccgag cggccgatgc gcaagcggac
      901 gcgatgtcgc tcgcccgttc gtagctgaac ggattcattg actgccctcc ttggccacct
      961 cgcggatggc ggcgacgatg ttggggtaag cggagcagcg gcaaatgttg ccgctcatcc
     1021 gctcggcgat ttcggcgtcg gtcagggccg gtacggtggc gacatccgcc gtcgcataac
     1081 tggaccagcc ggctcggtgt tcggagagga gcgcgacggc ggagcagatc tggccgggcg
     1141 tgcagtaccc gcattgaaat ccgtcatgcc gcacgaacgc ggcctgcatc ggatgcagaa
     1201 cgccctcgtc tgccaacccc tcgatcgtgg ttatttcgtc gccatcatgc atcaccgcga
     1261 gcgccaggca gctgttgatg cgctgtccgt tgacgatgat ggtgcaggcg ccgcactggc
     1321 cctgatcgca gcccttcttg gagccggtga acccgagatg ctcgcgcagg gtatcgagca
     1381 acgtcgtgcg cgggtcgagg ttaagagcat aaggccgtcc attgattgtc agcctgacct
     1441 gctcgctctg ctgaggaacg gtttccgccg tctccgcgag cgccggcgaa gaagctagca
     1501 ccagagtcgc ggctccggtc gttttcagga acccgcgccg cgtagccttg gattcaagct
     1561 tgagcaaatc gttcacgaca ccgcctctac gttcgttcgc atgcgattta gagtaatgat
     1621 ctctgcgttc cctatcgcca gttgtcgacg ggcatcaggc gttccgcgcg gccgctcatg
     1681 cgttcaagcc gctttgcgag ctgcgatgga acatgaagta tcgccagcgc aaggtcggcg
     1741 ctgtcggcca cgagctcgcg catgaccgaa atcggcgtcg gatgcggggc tttcatttct
     1801 cccaccacac tgccggattg aatgctcagc tcggcgtcga atttgcgcgc gaggtgctgc
     1861 atgcacccgt tttcggcgag gcaaagcaca tgcagccggt tgatccgccg gttgctggcc
     1921 gcgagcagga ggtgctcgag cagcgccgtt cccacacctt ggctctgcca tgctcgctcg
     1981 atgctcaagg ccacttcggc gtcgcccgca ggctcgagca ggcgcaactc ggccgcgccg
     2041 cgtaacacgt cgtcgacgaa gaaaccgtag atgatcgcgc cgctaagcgc gcggggctcg
     2101 cagtaccccc ggatgaagtc gtcggaaacg gcgccaccga accgattgcg ccggctttcg
     2161 gcatcgaggt gcagcaaatg ccctcggtag agctcggcct caccgaccca caacctgcgg
     2221 atgctgccgc cgtatgtcag agcctcatcc atcgggtctc ctgagattcg atcgggagat
     2281 aagcggcagc taagcttggc gcttgcgcga aa
//
LOCUS       DATCWM010000115         3142 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_114349, whole genome shotgun sequence.
ACCESSION   DATCWM010000115 DATCWM010000000
VERSION     DATCWM010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3142
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114349"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(207..902)
                     /locus_tag="VIQ50_02120"
     CDS             complement(207..902)
                     /locus_tag="VIQ50_02120"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEY9359202.1"
                     /translation="MRPRLRIFCLFVAAAGVFGPLAALTQVGSPPTVGQIMPSDIDPQ
                     SGFRLPLPKREDLDDAGKAHYDRVAAPGATIAGLQGPSGIGLYSPKASELARALNRYL
                     RFEAGLAPRVREIAILTTAREMDSQFEWAAHEPEARKEGVEDRVIDIIKHRMPTAGLE
                     ETDATVIELGRQIFRDRKVTSDTFAKAQALFGANKLVELVMLMGNYAGTAALLTAVDM
                     QLHPGQKPLLPMP"
     gene            complement(1275..2588)
                     /gene="fahA"
                     /locus_tag="VIQ50_02125"
     CDS             complement(1275..2588)
                     /gene="fahA"
                     /locus_tag="VIQ50_02125"
                     /EC_number="3.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004334 - fumarylacetoacetase activity
                     [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetase"
                     /protein_id="HEY9359203.1"
                     /translation="MIDETHSVARRSWVASANGHADFPIQNLPFGVFTPGNGAACGGV
                     AIGDEIFDLAAALDLGLFDAQAAPAAEAASGATLNPLFALGRGARVALRRRVSEILDA
                     DGPERARIEGLRARLLHRAANCRLELPAAIGDYTDFFAGIHHATNAGKLFRPDNPLLP
                     NYKYVPIGYHGRASSIRPSGANVRRPNGQRKGATETAPSFGPSRSLDYELELGVWVGP
                     GNELGTPLPIAEAGNHVAGFCLLNDWSARDIQGWEYQPLGPFLGKSFFTTVSPWVVTP
                     EALTPFRTAQASRPAGDPPPLPYLFDQADQAAGAFDIELEVLLLTSGLAVKGLPPQRL
                     SLGNTRHLYWTVAQLVAHHSSGGCNLRAGDLLGTGTISAPTDEGLGSLLEISAGGRRP
                     LTLTSGETRRFLEDGDTVIMRARCQREGFASIGFGECRGTIAPAL"
     gene            2858..>3142
                     /locus_tag="VIQ50_02130"
     CDS             2858..>3142
                     /locus_tag="VIQ50_02130"
                     /inference="COORDINATES: protein motif:HMM:NF014653.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ldh family oxidoreductase"
                     /protein_id="HEY9359204.1"
                     /translation="MGAGMPSNTQSQVISSADLERFARALFVAAGVAPAMADAWAKSL
                     VWANLRGVDSHGVLRIPGYIERLKRKDINPAPDMRVEKRAGAIAVLEADRA"
BASE COUNT          536 a          994 c         1093 g          519 t
ORIGIN      
        1 cgtgaagcgg agtaaaaata ccatcccgcc gcaacgaaac tataaactaa caacccacta
       61 acgtagctca ggtcgggaac cgaggaagcg aaggacgtag gactgcggcc tgctcgccat
      121 cgtggtcgcg ctgttcgccg cctaggcgct gagcctcccc gcgcctgcgc aagggttacc
      181 gcaattcaat ccgatcagca catgctttac ggcatgggca acagcggctt ttgccccgga
      241 tgcagctgca tatcgacggc cgtgagcagc gccgcggtac cggcatagtt gcccatcaac
      301 atcaccagtt cgacgagctt gttcgctccg aacagcgcct gcgccttggc gaaggtgtcc
      361 gaggtcacct tgcggtcgcg gaaaatctgc cggccaagct cgatgacggt ggcatcggtc
      421 tcctcgagcc ctgcggtcgg catgcggtgc ttgataatgt cgatgacgcg atcttcgaca
      481 ccttctttgc gcgcctccgg ctcatgcgcc gcccactcga attggctgtc catctcacgc
      541 gcggtcgtca ggatcgcgat ctcgcgcacg cgcggagcca gaccggcctc gaaacgcagg
      601 taacggttga gggcgcgcgc taactcggac gccttcgggc tataaagccc gatcccgctc
      661 gggccttgca gcccggcgat cgtggcgccc ggcgccgcca cccggtcgta gtgcgccttg
      721 ccggcgtcgt ccaaatcttc gcgtttcggc agcggcaggc ggaaccccga ttggggatcg
      781 atgtcggatg gcatgatctg tcccacggtc ggcggcgaac cgacctgcgt caaagccgcc
      841 agcggaccga agacgccggc ggcggcgacg aaaaggcaaa atatacgcaa gcgcgggcgc
      901 atggggctgc cctcttgcga gactcgtgcg gggggaatgt cgcctatctg aacgcgatgc
      961 gccaggcgtt cttgagtgcc ggccagcgcc tgagggggta gcgccggtat attccgtagt
     1021 gcagcagcag gcgttgcagg aagtccacgt cgtccactcc cattatgggg tacccaccaa
     1081 acgccgaacc ggggcaatgg ttccgatcat ttccgagtcg gccgcagccg tcgagaggcc
     1141 cgactcgttg gggcggatac tcagcaagat ctataagccc tgtgtatcgc tttgatgacg
     1201 ccgagaaagc ggcgccgcac gcgacggcgc ccggagggcc catcaccgcg ggctggcgcg
     1261 ggagccggcc aacctcaaag ggctggggca atcgttccgc ggcactcgcc aaagccgatg
     1321 ctggcaaatc cttcgcgctg gcagcgcgcg cgcatgatga cggtatcgcc atcttcgagg
     1381 aaacggcgcg tctcgcccga ggtgagggtc agcgggcgcc gtccgcccgc tgagatctcg
     1441 aggaggctgc cgagcccctc atcggtcggc gccgagatcg tgccggtgcc caacagatcg
     1501 cctgcgcgca gattgcagcc tccgctgctg tgatgcgcaa cgagctgcgc caccgtccag
     1561 tagagatgcc gcgtgttgcc gagcgacagt cgctgcgggg gaaggccctt caccgcaagg
     1621 ccggacgtga gcagcaacac ctcgagctcg atatcgaagg cgcccgccgc ctggtccgcc
     1681 tgatcgaaga ggtaaggtag cggagggggg tctcccgcgg gccggctcgc ctgtgccgtg
     1741 cggaagggcg tcaaggcttc cggcgtgacc acccagggcg aaacggtggt gaaaaagctt
     1801 ttgccgagga agggcccgag cggctggtat tcccacccct gaatgtcgcg cgcagaccaa
     1861 tcgttgagca ggcaaaatcc tgcgacgtgg tttccggcct cggcgatggg gagcggcgtg
     1921 ccgagctcgt tgccgggacc gacccaaacg cccaactcga gctcgtagtc gagactgcgc
     1981 gacggcccga agctcggcgc cgtctcggtt gcgcctttgc gctggccgtt cgggcggcgc
     2041 acgttcgcgc cggagggccg gatcgaggac gcccggccgt ggtagccgat cgggacgtat
     2101 ttgtagttcg gcagcagcgg attgtcggga cgaaacagct tgccggcgtt ggtggcgtga
     2161 tgaatgccgg cgaagaagtc ggtgtagtcg ccgatggcgg cgggaagctc gaggcggcaa
     2221 ttcgccgcgc ggtgcagaag ccgcgcgcgc aatccttcga tgcgcgcgcg ctcggggccg
     2281 tccgcgtcga gaatctcgct cacgcgccgg cggagcgcaa cgcgcgcgcc gcgcccgagc
     2341 gcgaacagcg gattgagggt tgcgccggaa gcggcctcgg cggcgggggc ggcctgcgcg
     2401 tcgaataggc cgagatcgag ggccgcggcg agatcgaaga tctcgtcgcc gatggcaacg
     2461 cccccgcagg cggcgccgtt tcccggcgtg aacacgccga atggcaggtt ctggatcggg
     2521 aaatcggcat ggccattggc cgaggccacc caactgcgcc gcgcgacgga atgggtttcg
     2581 tcgatcatga tcttcgctga gttggagaaa agccggccgc tcggcgcggc ttacggccgc
     2641 tcgcgtttcg gatggaggcg cctgtgcagg attttcctcc ccggtcgcat gccgcgcgtt
     2701 tgcgcgcttg cgagcatagt gccgttcgct ttgcgccgag acaagccgac cactgcgcca
     2761 atcccacaca cgcgcgcgtg cgagcgaggc gggattgttg cccggtcagt cccttcgtat
     2821 agaggtcgtg gagagttatg ccagcgcgag tgttgccgtg ggtgccggta tgccgtcgaa
     2881 tactcaatcg caggtgattt cgagcgccga tctcgagcgc ttcgcgcgcg cgctgttcgt
     2941 ggcggccggc gttgcgccgg caatggcgga tgcgtgggcg aaatcgctgg tctgggcgaa
     3001 tctgcggggg gtggactcgc acggcgtctt gcgcatcccc ggttacatcg agcggctcaa
     3061 gcgcaaggac atcaatccgg ccccggacat gcgggtggag aagcgcgccg gcgcgatcgc
     3121 ggtgttggaa gcggatcgcg cg
//
LOCUS       DATCWM010000116         3377 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_465213, whole genome shotgun sequence.
ACCESSION   DATCWM010000116 DATCWM010000000
VERSION     DATCWM010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3377
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_465213"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..207)
                     /locus_tag="VIQ50_02135"
     CDS             complement(<1..207)
                     /locus_tag="VIQ50_02135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HEY9359205.1"
                     /translation="MAATVRLQREPFDAASETEKLRRGRSNIGAVVTFTGICRGDEAG
                     APLLAMTLEHYPDMAEAEIARHVAA"
     gene            complement(233..484)
                     /gene="moaD"
                     /locus_tag="VIQ50_02140"
     CDS             complement(233..484)
                     /gene="moaD"
                     /locus_tag="VIQ50_02140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin converting factor subunit 1"
                     /protein_id="HEY9359206.1"
                     /translation="MKLRYFAWVRERIGKPEEEIDPPAGVATIAELVTWLSQRGEEYA
                     HAFQNPRVIRAAIDRAHVRSDAAISGAREIAFFPPMTGG"
     gene            complement(488..1096)
                     /gene="pgsA"
                     /locus_tag="VIQ50_02145"
     CDS             complement(488..1096)
                     /gene="pgsA"
                     /locus_tag="VIQ50_02145"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013912880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HEY9359207.1"
                     /translation="MNTATSRQVSSRQLAVPNLLTYARIAAVPAVVACLYWQDILQGG
                     LWLRWVAVVIFISAGVTDALDGYFARKRGEQSAFGRMLDPIADKLLVASCLLMLAADG
                     TIRGWSLWAAIVILCREILVSGLREYLAELRVSVPVTQLAKWKTTLQLVAVGFLIAGK
                     AGDVILPVVTPIGLTLLWLSALLTLYTGWDYFRAGVRHLTED"
     gene            complement(1283..3313)
                     /gene="uvrC"
                     /locus_tag="VIQ50_02150"
     CDS             complement(1283..3313)
                     /gene="uvrC"
                     /locus_tag="VIQ50_02150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HEY9359208.1"
                     /translation="MNGTKNDTDPTTELREDEDEPALPELESEIDLAAAGALAAGRAV
                     ILNYAKLAPSSPGVYRMIDANGEVLYIGKAKSIRKRIIAYARPTGYDPRIERMIAATA
                     ALEFVSTATETEALLLEANLIKRLRPRFNVLLRDDKSFPYILITADHWAPQILKHRGA
                     RTRQGNYYGPFASVWAVNRTITALQRAFLLRSCSDPFFESRTRPCLLYQIKRCSGPCT
                     REIDFAEYGKLVREANAFLSGKSRAVKDALAAEMEKASGTLEFERAAIYRDRLAALSA
                     VQSHQGINPRGVEEADVFAVHQAGGFSCVEVFFFRTGQNWGNRAYFPKADRSLAAGEV
                     LGAFLAQFYDDKPCPRCIFISHEIEERALLAEALSTKSGHKVEVNVPQRGEKKDLVDH
                     ALANAREALARKLADSSSQRRLLELLADVFALPRPPRRIEVYDNSHIQGSNAVGAMIV
                     AGAEGFQKNQYRKFNIRAADLVPGDDFGMMREVLSRRFKRLMNEAPRPMPGASSPGAQ
                     AGEAIDIAGSPDGDAASPWPDLVVIDGGRGQLSAAQETLTALGIIDVPLVAVAKGPDR
                     DAGMETFFVPGRDPFKLKPRDPVLYFIERLRDEAHRFAVGSHRIRRRRDIREAGLQEI
                     PGIGPTRKRALLHHFGTLKAIERAAPADLAKVPGISAETARKIYDFFHERAG"
BASE COUNT          597 a         1103 c         1105 g          572 t
ORIGIN      
        1 cgccgccacg tgacgcgcga tctcggcctc ggccatgtcc ggataatgct ccagcgtcat
       61 ggcgagcagc ggagcacccg cctcgtcgcc tcggcagatg ccggtaaacg taacgaccgc
      121 accgatattg ctgcgaccgc gacggagctt ctccgtctcg ctggcggcat cgaacggttc
      181 gcgctgcagt cgcacggtgg cggccatgtc cgtctcccgc ttgtcctcgc gactatcccc
      241 ccgtcatcgg cggaaagaag gcgatctcgc gcgcacccga aatggctgcg tcggagcgaa
      301 cgtgggcgcg atcaatggca gcgcggatta ccctcgggtt ttggaacgcg tgggcgtatt
      361 cctcgccgcg ctggctcagc caagtcacga gttccgcgat cgttgcgacg cccgccggcg
      421 ggtcgatttc ctcctcgggc ttgccgatgc gctcgcgaac ccaggcgaaa taacgaagct
      481 tcaacgctta atcctcggtc aagtgacgca ccccggcacg gaaatagtcc caacccgtat
      541 acagcgtcag caatgccgag agccacagca gggtaagccc gatcggcgtc accaccggca
      601 ggatcacatc acccgccttg ccggcaatga ggaagccgac cgcgacgagc tgcagcgtcg
      661 tcttccattt cgcgagctgc gtgaccggaa cgctgacgcg cagctcggcg agatattcgc
      721 gcaggccgga aaccagaatc tcgcggcaga gaatgacaat cgccgcccac agcgaccagc
      781 cgcggatggt gccgtcggcg gccaacatca acaggcacga ggccaccagg agcttgtccg
      841 cgatcggatc gagcatgcgg ccgaaggcgg attgctcacc gcgcttgcgc gcaaaatagc
      901 cgtcgagagc gtcggtcact ccggcgctga tgaagatcac cacggcgacc caccgcagcc
      961 acaggccacc ttgcagaatg tcctgccaat agaggcacgc cacgaccgcc ggcaccgcgg
     1021 cgatgcgggc gtaggtcagg agattcggca ccgcaagctg ccgcgacgaa acctgacgtg
     1081 aggtggccgt attcatggac cgaaggaata cctttcccgc gtcggcgtca aacgggaatg
     1141 ccggcccgcc catcgctttg tgcggcacgg gacataagcg tgaacaccat caccggttcc
     1201 caacacaaat tccctacata aatatgacga gcattcggga catgcatccc tgctccgcct
     1261 atcggcgata cgccggcgcg cgttatcccg cgcgctcgtg gaagaagtcg taaattttgc
     1321 gcgcggtctc cgcgctgatt cccggcactt tggcgagatc ggccggcgct gcgcgctcga
     1381 tcgccttgag cgtcccgaaa tgatggagca gggcgcgctt gcgggtcggg ccgattccgg
     1441 ggatttcctg tagccccgcc tcgcggatat cgcgccggcg gcgaatgcgg tgcgagccga
     1501 cggcgaaacg atgcgcctcg tcccgcagcc gctcgatgaa gtaaaggacc ggatcgcgcg
     1561 gcttgagctt gaatggatcg cgccccggca caaagaaggt ttccatcccg gcgtcccgat
     1621 ccgggccctt ggcgacggca acgagcggca cgtcgatgat gccgagcgcc gtgagggtct
     1681 cctgtgccgc gctcaactgc ccgcggccgc cgtcgataac gacgagatcg ggccacggcg
     1741 aggcagcatc gccatccggg ctaccggcga tgtcgatcgc ctcgcccgcc tgcgctcccg
     1801 ggctggacgc acccggcatc gggcgcggcg cctcgttcat cagccgcttg aaacggcggc
     1861 tcagcacctc ccgcatcatg ccgaagtcgt cgcccggcac caggtcggcg gcacggatat
     1921 tgaatttgcg gtactggttt ttctggaacc cctccgcccc ggcgacgatc atggcgccga
     1981 cggcgttgct gccctggatg tggctgttgt cgtagacctc gatgcggcgc ggcggccgcg
     2041 gcagggcgaa gacgtcggcc agcaactcca gcagcctgcg ctgggaggaa ctgtcggcaa
     2101 gcttcctcgc cagcgcctcg cgcgcattgg cgagcgcgtg atcgacgaga tccttcttct
     2161 cgccgcgctg tggcacgttc acctcgacct tgtggccgct cttggtgctc aatgcctcgg
     2221 caagcagcgc gcgttcctca atctcgtgcg agatgaagat gcagcgcgga cacggcttat
     2281 cgtcatagaa ttgcgcaaga aacgcgccca gcacctcgcc ggcggcgagc gagcgatcgg
     2341 ctttggggaa ataggcgcga ttgccccagt tctgcccggt gcggaagaag aacacctcca
     2401 cgcagctgaa gccgccggcc tgatgcacgg cgaacacgtc cgcctcctcg acgccgcggg
     2461 gattgattcc ctgatgcgat tgcaccgccg agagcgcggc gagccggtcg cggtagatgg
     2521 ctgcgcgctc gaactcgagc gtaccggagg ctttctccat ttccgctgct agcgcgtcct
     2581 tcacggctcg gctcttgccg gagagaaacg cattcgcttc gcgcacgagc ttgccgtatt
     2641 cggcaaaatc gatctcgcgc gtgcaggggc cggagcagcg cttgatctgg taaagcaggc
     2701 acggccgcgt gcggctctcg aagaagggat ccgagcatga gcgcagcaga aacgcgcgct
     2761 gcagcgcggt gatggtgcgg ttgaccgccc acaccgaggc gaacggaccg tagtagttgc
     2821 cctgacgggt gcgcgcgccg cggtgcttga ggatttgcgg cgcccagtgg tcggcggtga
     2881 tcaagatata gggaaacgac ttgtcgtccc gcagcagcac gttgaagcgc gggcgcaggc
     2941 gcttgatcag gtttgcttcc agcagcagcg cctcggtctc cgtcgcagtc gagacgaact
     3001 cgagcgcggc ggtcgcggcg atcatgcgtt cgatgcgggg gtcgtagccg gtcggacggg
     3061 cataggcgat gatgcgtttg cggatgctct tcgccttgcc gatatagagc acttcgccgt
     3121 tggcatcgat catgcggtag acgccggggg aggacggcgc gagcttggca taattaagga
     3181 tcaccgcgcg gccagccgcg agcgcaccgg cggcggcaag gtcgatctcc gattcgagct
     3241 cgggcagcgc cggctcgtcc tcgtcctcgc gcaattcagt ggtgggatcg gtgtcgttct
     3301 tggtgccgtt cattgcgaac gttaattagg ttttcggcgc ggcgacggcc accgacgcga
     3361 gcggcgtccg tggcctg
//
LOCUS       DATCWM010000117         2231 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_470594, whole genome shotgun sequence.
ACCESSION   DATCWM010000117 DATCWM010000000
VERSION     DATCWM010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2231
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_470594"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..449)
                     /locus_tag="VIQ50_02155"
     CDS             complement(<1..449)
                     /locus_tag="VIQ50_02155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359209.1"
                     /translation="MLNHWLIHLIGHLSGLSDAQLREIEKSLPATKALIDLLNRAQPI
                     IEQAQSLYAEAEPLIDQAKEEWQMVGPAAQILIDVISHHVNKGSSPAEAAEAVRTALD
                     GSIKSVAQDQGMDREISRVTVFGGTGFVGRRIARHLRGSGATVRIASR"
     gene            924..1496
                     /locus_tag="VIQ50_02160"
     CDS             924..1496
                     /locus_tag="VIQ50_02160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359210.1"
                     /translation="MRAKPTPPAAAAAVNKQSPAPQQETDATVAQPARKAAKDAKALP
                     PRKHTKTDTSVAEKEPRGQTSAEALARAALANVDANRPAPSDAPIEPGLADTRSAPVD
                     IQSRQADVPPRRADVGAPPPIIAVPSSAPGVEAAPHSLDIQSPPVAQSSPVAPVDIQP
                     RPVVGVEAPPRTSEIPRPPMPVGTASPEIK"
     gene            complement(1845..2183)
                     /locus_tag="VIQ50_02165"
     CDS             complement(1845..2183)
                     /locus_tag="VIQ50_02165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359211.1"
                     /translation="MDDDLHEQVLQIEAHIEQLADVIERCRKIILISKAAVVVGGTLI
                     LATITGAIGFDPTIMIGAIAAAIGGTVVFGSNMSTLKQTVTNMKAAEAHRTELIGRMD
                     LRVVGDGAGG"
BASE COUNT          410 a          759 c          617 g          445 t
ORIGIN      
        1 cgcgaggcga tgcgcaccgt ggcgcccgat ccgcgcaaat gacgcgcgat gcgacgacca
       61 acaaagccag tcccgccgaa caccgttacg cggctaattt ctcgatccat cccttgatcc
      121 tgcgcgacgc tcttgattga cccgtcaagc gccgtccgca cggcctcagc cgcctctgct
      181 ggcgaactac ctttgttgac atgatgcgag atcacatcga tcaaaatttg cgccgcgggg
      241 ccgaccattt gccactcctc cttagcttga tcgatcagcg gctcggcttc ggcgtacagg
      301 ctttgcgcct gttcgataat gggctgggct ctattgagaa gatcaatcag cgccttggtc
      361 gctggcaacg atttctcaat ctccctgagt tgtgcatcac tcagaccgga aaggtgacca
      421 atgaggtgaa ttagccagtg gttcagcata gttccacctt gctggtagcg acgctaactc
      481 ccgtaactcc tgggtggctc cccagccggc cgccgggacg ggtatctcgg tggtgttcgc
      541 attgccggcc aaggtcgcgt tgttgccgat gtcgtagacc tcgattcctc cgtctcgcct
      601 tgctgccacc tccattggcg ggctgaactt ttcccatagt atcgtcactt tttctcgcgg
      661 ctcgcgccct gaattcgccc tgagggcgcc gttggaattc cgcacggttc cttcggaggg
      721 ggatctccat gtcgggcgag aattcctgct tttcgcgctt cctcgtgaag ttcgtcgagg
      781 tcagcgccgc tggcctcgct actgcgatta gtgcctatgc actagcgcat ctcggggggc
      841 tcctgtcatc ctctcccacg ccaccttccg cgccggcgac cgctgttcac gtcagtccga
      901 tcgccagcga gccggccgag ggcttgcgcg ccaaaccgac cccgcctgct gcggccgctg
      961 cggtcaacaa gcagagccct gcgccgcagc aggagaccga tgcaaccgtc gcgcagcccg
     1021 cgcgtaaggc cgcgaaggac gcgaaagcat tgccgccgcg caagcacaca aagaccgata
     1081 cgagcgtggc cgagaaggag cctcgcggcc agacatcggc ggaagccctg gcccgggccg
     1141 cactcgccaa tgtcgacgcc aatcggccgg caccaagtga cgcgccgatc gaacccgggc
     1201 tcgccgacac tcgttctgcg ccggtcgaca tacagtcgcg tcaggccgac gtgccgccgc
     1261 gccgggcgga tgtcggggcg ccgccgccga ttatcgcagt tccttccagc gctccgggtg
     1321 tcgaggcggc tccgcattcc ctcgacattc agtcgccgcc ggtcgcccag tccagtccgg
     1381 tcgcccctgt cgacatccag ccgcggccgg tcgtcggcgt cgaggcgccg ccgcgtacca
     1441 gcgaaatccc gcgtccgccc atgccagtcg ggacagcgtc gcctgaaata aaatagtcac
     1501 cagatcgccg acgccctcaa cgcacgcggc atcagcacga cgcgcggtgg ccaatcgtat
     1561 gcgaactcag tgagcaacgt gttggcacga gcgtaggcgt tccatccgcc gcgtcaaagc
     1621 gcgaagccgc tcacactgtc tcaaccgctt tgcccctagc tcggcgagtg tcatggatcc
     1681 gtcagcacgt cgcgaccagg acaactccca gagacccgac tggctggctg atcgcaaatt
     1741 atccctttga acggtcgcac agattttcgg gaatcgagcc gaattccgtc ctcagagact
     1801 attcgcgtta gctctggacg ctccgagtcc caccatccgc gtgcctagcc gccggccccg
     1861 tctcccacca ccctaagatc cattctgccg atcagctcgg tcctgtgcgc ctcggcggct
     1921 ttcatgttag tcacagtctg cttcaaggtg ctcatgtttg acccaaaaac gaccgtccct
     1981 ccgatagcag ccgcaatcgc cccgatcatg atagttggat cgaacccgat cgctccggtg
     2041 attgtggcca ggatcaaagt tccgccaacg acaacggcgg cttttgaaat gagaatgatc
     2101 ttccgacatc tctctataac atcggcgagc tgctcaatgt gagcttcgat ctgcaagact
     2161 tgttcatgca ggtcgtcatc catgtgaaat ctattttatc ctcaccgaac ccaggggttc
     2221 acatgcaaat a
//
LOCUS       DATCWM010000118         2214 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_368124, whole genome shotgun sequence.
ACCESSION   DATCWM010000118 DATCWM010000000
VERSION     DATCWM010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2214
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_368124"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2214)
                     /locus_tag="VIQ50_02170"
     CDS             complement(<1..>2214)
                     /locus_tag="VIQ50_02170"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007199945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="error-prone DNA polymerase"
                     /protein_id="HEY9359212.1"
                     /translation="NDRARLARRAALARQIGVPLIAVNDVLYHHPDRRELQDVLTCIR
                     EHLTIDTAGRRLVVNAERYLKPPAEMARLFHDIPEAIAETAALDAALTFSLGELHYEY
                     PEEMRAGFATPQEALVHLAWEGAAARYPDGIPDTVCQSLDHELALIAKLNYAPYFLTV
                     HHIVGYARSQNILCQGRGSAANSAVCYCLRITDVDPRDGRLLFERFISSDRGEPPDID
                     VDFEHERREEVIQHIYAHYGRDHTGIAATVISYRGRSAIREVGKVFGLSEDTIGALSS
                     SIWGMGGGGVRSTELVRVGIDVNSPRMQKIRALAVEIQSFPRHLSQHVGGFVITRSRL
                     DEVVPIGNGAMEDRTFVEWDKDDLDALGILKVDVLGLGMLTCLRKAFELTEKHYGLSF
                     RSFREGQETGQGYFTLATLPKEDPAVYRMLQRADSLGVFQVESRAQMSMLPRLKPKEF
                     YDLVIEVAIVRPGPIQGDMVHPYLRRRQQIEPVSYPSEELKAVLDKTLGVPLFQEQAM
                     KIAIVAGGFTPGEADKLRRAMATFKRTGTIGMFKSKMIEGMVARNYPRDFAERCFSQI
                     EGFGEYGFPESHAASFALLVYASAWLKCRYPDVFAAALLNAQPMGFYAPAQIVRDLRE
                     HGVEVRPVDINHSHWDATLEPGPQPAARMHALHHDMAGDMRTTHALRLGFRKIKGLSE
                     EHGRSITQNRAAGYTCIRDLWLRTGLSPRIIARLADADAFGSLGLSRRQALWAAKA"
BASE COUNT          407 a          678 c          732 g          397 t
ORIGIN      
        1 cgctttcgcc gcccacaacg cctgccgccg gctgagcccg agcgagccga acgcatcggc
       61 atcggccagg cgcgcgatga tgcgcggcga caggccggtg cgtagccaga gatcgcggat
      121 gcaggtgtag ccggcagcgc ggttctgcgt gatgcttctg ccatgttctt ccgacaatcc
      181 cttgatcttg cggaacccca gtcgtagcgc gtgggtggtg cgcatgtcgc ccgccatgtc
      241 gtggtggagc gcatgcatgc gcgccgccgg ctgcgggcct ggctcgagcg tggcatccca
      301 gtgggaatgg ttgatgtcga ccggacgcac ttcgacacca tgctcgcgca gatcgcgcac
      361 gatttgcgcc ggcgcgtaga accccatcgg ttgcgcattg aggagagccg ccgcaaacac
      421 gtccggatag cggcatttga gccaggccga agcataaacg agcagcgcga aactcgcggc
      481 gtgactttcc gggaagccgt attcgccgaa tccctcgatc tggctgaagc agcgctcggc
      541 gaagtcacgc ggataatttc tcgccaccat tccttcgatc atcttgctct tgaacatgcc
      601 gatggtgccg gtgcgcttga aggtcgccat cgcgcggcgc agcttgtcgg cttcgcccgg
      661 cgtgaagccg cccgccacga tggcgatctt catcgcttgc tcctgaaaca aggggacgcc
      721 gagcgtcttg tcgaggaccg ccttgagctc ctccgaagga tacgacaccg gctcgatttg
      781 ctgccgacgg cgcagatagg gatgcaccat gtcgccctgg atcgggcccg gccgcacgat
      841 cgcgacttcg atgacgagat cgtagaattc cttcggcttc agacgcggca gcatcgacat
      901 ctgcgcgcgg ctttcgacct gaaatacgcc gagcgagtcg gcgcgttgca gcatgcgata
      961 aacggcgggg tcctctttcg gtaacgtagc gagggtgaaa tatccctgcc cggtctcttg
     1021 tccttcgcgg aaggaacgga aggaaaggcc atagtgcttc tcggtcagct cgaacgcctt
     1081 gcgcaggcac gtgagcatgc ccagcccgag cacatcgacc ttgaggatgc cgagcgcatc
     1141 gagatcatcc ttgtcccact cgacgaaggt gcggtcctcc atcgcgccat tgccgatcgg
     1201 aaccacctcg tcgagccggc tgcgggtgat gacgaacccg ccgacatgct gcgagagatg
     1261 gcgcgggaaa gattgaatct cgacggcgag cgcgcggatt ttctgcatac gcgggctgtt
     1321 cacgtcgatg ccgacgcgca cgagttcggt gctgcgcacg ccgccgccac ccatgcccca
     1381 gatcgaggag gaaagcgcgc cgatcgtgtc ttccgacagc ccgaagacct tgccgacctc
     1441 gcggatggca gaacggccgc ggtaggagat gacggtcgcg gctatgccgg tatggtcgcg
     1501 accgtaatgc gcgtaaatgt gttggatcac ctcctcgcgc cgctcatgct cgaagtcgac
     1561 atcgatatcg ggcggctcgc cgcgatcgga ggagatgaag cgctcgaaca gcaggcggcc
     1621 atcccgcggg tcgacatcgg tgatgcgcaa gcaatagcag accgccgagt ttgccgccga
     1681 gccccggcct tgacacagga tgttttggct gcgcgcgtaa ccgacgatgt gatggacggt
     1741 gagaaagtaa ggcgcgtagt tgagcttggc gatcagcgcc aattcatgat cgagcgattg
     1801 gcagacggta tcggggatgc cgtcgggata acgcgcggcg gcaccctccc aagccagatg
     1861 gacgagcgct tcttgaggcg tcgcaaaacc cgcgcgcatt tcttcgggat attcgtaatg
     1921 cagctcaccg agcgagaagg tcagcgccgc gtcgagtgcc gcggtctcgg cgatcgcttc
     1981 cgggatgtcg tggaagagac gcgccatctc ggcgggcggc ttgagatagc gctcggcatt
     2041 gacgacaagg cggcgtcctg ctgtgtcgat cgtcaggtgc tcgcggatgc aggtgagcac
     2101 gtcctgcaat tcgcgccggt cgggatgatg atagagcacg tcattgacgg cgatgagcgg
     2161 cacgccgatt tggcgcgcga gcgcagcgcg ccgggcgagc cgcgcgcgat catt
//
LOCUS       DATCWM010000119         3426 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_497613, whole genome shotgun sequence.
ACCESSION   DATCWM010000119 DATCWM010000000
VERSION     DATCWM010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3426
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_497613"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..246)
                     /locus_tag="VIQ50_02175"
     CDS             complement(<1..246)
                     /locus_tag="VIQ50_02175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011157996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEY9359213.1"
                     /translation="MLDAARRLITPSARSDVPPFMVMDVMAAAARIEAAGGHVIHMEV
                     GQPAAAPPASAIAAARAALASGRLRYTESLGIATLRAR"
     gene            415..1827
                     /locus_tag="VIQ50_02180"
     CDS             415..1827
                     /locus_tag="VIQ50_02180"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020508823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HEY9359214.1"
                     /translation="MTGTERPIRPWRTTPAARLIALVTATALAGAGAPARAQQKGPPV
                     VRDAEIEQLLREYTQPILRAAGLAQQNVQVVIINDRSFNAFVADGRRIFVNGGALMEA
                     ETPNQIIGVLAHESGHIAGGHLSRMREAIASATTQSIIAMLLGAGALVAASRSGGADL
                     GQAGVAALAGPSMAIQNTMFGYMRAQEEQADRAGVKFLTATGQSPKGMYETFKRMADQ
                     SLYQVRYMNPYLQTHPLPSERVAALEGLAKASPYWDHKDPPALQMRHDLMRAKLYGFI
                     ERADGVARRYPLSDTSLPARYARAIAAYRFYDPRAALAQIDGLIQAQPQNPYFYELKG
                     QALLEAGKPAEAVGPLRHAVQLAPNPSLIQIMLGQALVATRDRAHVDEAIPLLQAAVM
                     REQDSPDAYGHLAMAYGLKNDLPHADLASAQAAYIRGDLKTARELAARAKTRFPVGSP
                     GWVRADDLASLKPPKSAQRR"
     gene            1848..2621
                     /locus_tag="VIQ50_02185"
     CDS             1848..2621
                     /locus_tag="VIQ50_02185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HEY9359215.1"
                     /translation="MKCDPRPFAAALLALAMALPAAGLAQAQSFSGDQRREIERIVKD
                     YLLSNPELLQDVMNELEKRQATAEAEKHRASVKEHSAALFSSPRQVTLGNPQGDVTVV
                     EFFDYNCSYCKRAMSDMLDLLKSDGHLKFVLKEFPVLGDGSVQAAQVAAAVRMQDPSG
                     KKYLEFHQKLLGGRGQADQARALAAAKDAGLDMARIEKDMASDEVKATLEESFKLADA
                     LGLNGTPSYVVGNDVVVGAVGLNSLKEKVNAARCGKPTC"
     gene            2821..3276
                     /gene="aroQ"
                     /locus_tag="VIQ50_02190"
     CDS             2821..3276
                     /gene="aroQ"
                     /locus_tag="VIQ50_02190"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HEY9359216.1"
                     /translation="MAKTVYVLNGPNLNLLGKREPKIYGRATLRDVEKLCRQAAARHK
                     LEVEFRQSNHEGEIVDSIHEAAAKKAAGIVINPGAYTHTSVAIRDAVAATDVPVVEVH
                     ISNIFARESFRHHSHIAAVAKASLCGFGVAGYALAIDGLAALIGARRKS"
BASE COUNT          640 a         1166 c         1112 g          508 t
ORIGIN      
        1 gcgcgcgcgc agcgtggcaa tgccgagcga ctcggtgtag cgcaggcggc cggaagcaag
       61 cgccgcgcgt gcggccgcga tggcgctcgc gggcggcgct gccgccggct ggccgacctc
      121 catgtggatg acgtgaccgc ccgctgcctc gatgcgcgcc gccgccgcca tcacgtccat
      181 gaccatgaac gggggaacat cgctgcgcgc tgacggcgtg atcaagcgtc gtgccgcgtc
      241 caacatcggc tttgtgctct cgacgactcg cgccgacccc gccccgctgt cgccgcattt
      301 ttccgcatga tttgcgtcac tgaggtcccg caatcagacc ctgatcgtaa ctgcgttgac
      361 cgccctgcgg cgcaccaata ggttgcgcgg gaaacggtgc caagcccagc ggacatgacc
      421 ggaaccgaaa gacctatcag gccgtggcga acgacgccag cggcgcgtct catcgccctc
      481 gtgaccgcca ccgccctcgc cggcgccggc gctcccgccc gcgcgcagca gaagggaccg
      541 cccgtcgtcc gcgacgcgga aatcgagcag ttgctcagag aatacacgca accgatcctg
      601 cgggcggcgg ggcttgccca acagaacgtg caggtcgtca tcatcaacga tcgttcgttc
      661 aatgccttcg tcgccgacgg ccgccgcatc ttcgtcaacg gtggcgcatt gatggaggcc
      721 gagacgccga atcagatcat cggcgtgctg gcgcacgaga gcggccacat cgccggcgga
      781 catctgtcgc gcatgcgcga ggcgatcgcc tctgcgacga cgcaatcgat catcgccatg
      841 cttctcggcg ccggcgcgct ggttgccgcc agccgcagtg gcggcgcaga cctcgggcaa
      901 gccggcgtgg ccgccttggc cgggccctcg atggcgatcc aaaatacgat gttcggttac
      961 atgcgcgccc aggaggagca ggccgaccgc gccggcgtaa agttcctcac cgcgaccggg
     1021 caatccccca aaggcatgta cgagaccttc aagcggatgg ccgatcagtc tctctatcaa
     1081 gtgcgctaca tgaatcccta tctgcagacc cacccgctcc cgagcgagcg cgtggcggcg
     1141 ctggagggac tagccaaggc gagcccctac tgggatcaca aggacccgcc ggcgctgcag
     1201 atgcgtcacg atctcatgcg cgccaagctc tacggcttca tcgagcgtgc ggatggggtg
     1261 gcgcgccgct atccgctgag cgacacctcg ctccccgcgc gctacgcgcg cgccatcgcc
     1321 gcgtatcgct tctacgatcc gcgcgccgcg ctggcgcaga tcgacgggct gatccaggcg
     1381 cagccgcaaa acccgtactt ttacgaactc aagggacagg cgctgctgga agcgggcaag
     1441 ccggcggaag cggtcggccc gttgcggcac gcggtgcagc tcgcacccaa cccgtcgctg
     1501 atccagatca tgctcgggca ggcactggtc gccacgcgtg accgcgcgca cgtcgacgag
     1561 gcgataccgc tcttgcaggc ggcagtgatg cgcgaacagg actcgcccga cgcctacggc
     1621 catctggcga tggcctacgg cctgaagaac gacttgccgc atgcggacct cgcgtccgcg
     1681 caggcggcct acatccgcgg cgacctcaag accgcgcgcg aacttgccgc ccgggccaaa
     1741 acccgctttc cggtcggatc gccaggctgg gtcagggccg acgatcttgc cagcctcaag
     1801 cccccaaaaa gcgctcagcg ccgttgatga cagaaggacg aacaacgatg aaatgtgatc
     1861 cgcgcccctt cgccgccgcg ttgcttgcgc tcgccatggc attgccggcg gctgggctcg
     1921 cgcaagccca atccttcagc ggcgatcagc gccgtgagat cgaacgcatc gtcaaggatt
     1981 atctgctgag caaccccgag ctgctgcaag acgtgatgaa cgagctcgag aagcggcagg
     2041 ccacggcgga ggcggaaaag catcgcgcca gcgtcaaaga gcacagcgcc gcgcttttca
     2101 gctcgccgcg gcaggtgacg ctgggcaatc cgcagggcga cgtcactgtg gtcgaattct
     2161 tcgactataa ttgcagctac tgcaaacgcg ccatgagcga catgctcgat ctcctcaaga
     2221 gcgacgggca tctcaaattc gtgctcaagg aattcccggt gctcggcgac ggctcggtac
     2281 aggcggcgca ggtcgcggcg gcggtgcgca tgcaagaccc cagcggcaag aaatatctcg
     2341 aattccatca gaagctgctc ggggggcgcg gccaggcgga ccaggcccgc gcactcgcag
     2401 cggcgaagga tgcaggcctc gacatggcac ggatcgagaa ggacatggcg agcgacgagg
     2461 tcaaagccac cctcgaagag agcttcaagc tcgccgacgc gctcgggctc aacggcacgc
     2521 cgagctacgt cgtgggcaac gacgtggtgg tcggcgcggt cggcctgaac tcgcttaagg
     2581 aaaaggttaa cgccgcacgc tgcggcaagc cgacctgcta gggattgggc cgctccccgc
     2641 gatcggacca acgccgagcg gctgcggccc ccacctcatg tgaattcgcg ttccgcgccg
     2701 acccgaggac ggcgatcggg cgagccgtcc gatgcgacgt gcgcgcgcgt ctcggcttcc
     2761 cctttatacg cgaggtccct ataaagcgga tgctgcgtgg gtcacggcgt cggaccgtcc
     2821 atggcgaaaa ccgtttacgt cctcaacggc cccaacctca atctgctcgg caagcgcgag
     2881 ccaaagatct atggccgcgc gacactgcgg gacgtggaga aactttgtcg tcaggccgcc
     2941 gcgcgccaca agctcgaagt cgaatttcgc cagtcgaacc acgaaggcga gatcgtggac
     3001 tcaattcacg aggctgccgc gaagaaagcc gcgggcatcg tcatcaaccc gggcgcctat
     3061 acgcacacct cggtcgcgat ccgcgacgcg gtcgcggcga ccgacgttcc ggtggtggaa
     3121 gtgcacataa gcaacatctt cgcgcgcgag agctttcgcc atcattccca tatcgccgcg
     3181 gtggcaaagg cgagcctgtg cggcttcggc gtcgccggct atgcgcttgc catcgacggg
     3241 ttggccgcgc tgatcggcgc gcgccgcaag agctaggcgc atgaccggcg agcgcaggag
     3301 caaggacaag gagaagctcg cgatcgatcc cgacatcgtg cgcgagcttg cgcgcctgct
     3361 cgacgaaacc gggctgagcg agatcgagtt cgagcgcgac ggtcaacgcg tgcgcgtggc
     3421 gcggca
//
LOCUS       DATCWM010000120         2302 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_330366, whole genome shotgun sequence.
ACCESSION   DATCWM010000120 DATCWM010000000
VERSION     DATCWM010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2302)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2302)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2302
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_330366"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            349..600
                     /locus_tag="VIQ50_02195"
     CDS             349..600
                     /locus_tag="VIQ50_02195"
                     /inference="COORDINATES: protein motif:HMM:TIGR03809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03809 family protein"
                     /protein_id="HEY9359217.1"
                     /translation="MPAHALDAVAQKWRALAERRRAHFLELYDSGRWKHYYSEEQFLY
                     RMREAIRMTQRWSEIAPAMDEVAPGQEQSLAKSLRRTAA"
     gene            735..1835
                     /locus_tag="VIQ50_02200"
     CDS             735..1835
                     /locus_tag="VIQ50_02200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase/NADH oxidase"
                     /protein_id="HEY9359218.1"
                     /translation="MTSALFSPIRLAQLELPNRIAVSPMCQYSADDGVASDWHLNHLG
                     MLANSGAALLVIEATGIERGGRISHGCLGLYSADCEAALARVLAHCRRYGSAKIGIQL
                     AHAGRKASARRPWEGGQPLTPDEDAWQTLAPSAIAFGPAWPVPREMTAADMKRVRDNF
                     VEAAKRAVRVGVDAIELHAAHGYLIHSFLSTISNKRSDRYGGSLTARMRYPLEVAQAV
                     RAVIPRGVPLGARITGNDWVEGGLTPDDAVVFSQELKAVGMDFVCVSSGGISADARPT
                     LVANTNVEFAEKVKRGAGIVTRAVGLIAAPKQAEAIIAEGKADMVALARAMLDDPHWG
                     WRAAYVLGAEVARPKQYQRAAPKVWAGAAFRD"
     gene            complement(1959..2288)
                     /locus_tag="VIQ50_02205"
     CDS             complement(1959..2288)
                     /locus_tag="VIQ50_02205"
                     /inference="COORDINATES: protein motif:HMM:NF021365.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2064 domain-containing protein"
                     /protein_id="HEY9359219.1"
                     /translation="MLVIGTDCPALTADHLRAAADILRGGADAAIIPAEDGGYALIGL
                     RAPARTLFSEMHWSVPSVMEETRRRLRDLGMTWQEPVTLWDLDLPEDIERLRQIGLHD
                     LIPSANA"
BASE COUNT          387 a          770 c          727 g          418 t
ORIGIN      
        1 taataggcga acaggcccac tgaggcctga attacagccc cgatcggcgc tcacgccccc
       61 ccgatcccct gcgccgatca acgcgacccg cccggatttc cccgtccggg cgggtcagtt
      121 tttgggcccc cgcacgctgc gcctccccca ggagcaagcg aaatcccttc cggcctggac
      181 gactcccgcc cttgtgcccc gcagaaggac tatgatgtcg agcgattcgc tgatgtgcct
      241 tgggtgcagc gatcttaaga gcggtctgtc gttgcttgtg cgtgctccgg accagacgac
      301 ccaacgtcgc catgagcatt gcgacccggc tcctccatgt cggcacgaat gcctgcgcat
      361 gcactcgacg cggtcgccca gaaatggcgc gccctcgcgg agcgccgccg tgcgcatttt
      421 ctcgagctct atgacagtgg gcgctggaag cactactaca gcgaagagca attcctctat
      481 cgcatgcgtg aggccattcg catgacgcag agatggtccg agatcgcgcc ggcgatggat
      541 gaagtcgcgc cggggcagga gcaaagcctc gccaagagtc tgcgtcggac cgcagcttga
      601 agcgtcttcg cgttgtctcc cctgtcatgc gccgtgcccg gacgtcataa gcgcgatccc
      661 aagcgcttcc gcgccgcgcc gccattccct atggttcact ttcctccatc gtggctcgta
      721 accgatcgtg tgatatgacc agcgccctgt tttctcccat ccgcctcgcc caactcgagc
      781 ttccaaaccg catcgcagtc tcgccgatgt gccaatacag cgccgatgat ggcgtggcct
      841 cggattggca cctcaatcac ctcggtatgc tcgccaactc cggcgcggcg ctactcgtaa
      901 tcgaggcgac cggcatcgaa cgcggcggcc gcatcagcca cggttgcctt ggtctttatt
      961 cagccgactg tgaagcggcg ctggctcgcg tgctcgccca ttgccgtcgc tacggtagcg
     1021 ccaagatcgg catccagctc gctcacgcgg gccgtaaagc ctccgcgcgg cggccgtggg
     1081 agggaggcca gccgctcaca cccgatgagg atgcctggca aaccctcgct ccgtcggcga
     1141 tcgccttcgg ccccgcttgg ccggtgccgc gcgagatgac ggcggcggat atgaagcgcg
     1201 tgcgcgataa cttcgtcgaa gccgcaaagc gtgcggtccg ggttggcgtc gatgccatcg
     1261 agttgcacgc agcgcacgga tatctcattc atagttttct ctcgacaatc tccaacaaac
     1321 gcagcgaccg gtatggcggc tccctgacgg cgcgcatgcg ctatccgctc gaagtcgcgc
     1381 aggcggtgcg cgcggtcata ccgcgcggcg tgccgctcgg cgcgcgcatt actgggaacg
     1441 actgggtcga aggcgggctc acgcccgacg atgcagttgt cttcagccag gagctaaagg
     1501 cggttgggat ggatttcgtg tgcgtttcct caggcggcat tagcgccgat gcccggccca
     1561 ccttggttgc taacaccaac gttgagttcg ccgaaaaggt gaagcgcggc gccggcatcg
     1621 tgacgcgtgc ggtcgggctg atcgccgcgc ccaagcaggc cgaggcgatc atcgccgaag
     1681 ggaaggccga tatggtcgca ctcgcgcgcg ccatgctcga cgatccccat tggggctggc
     1741 gggcggcgta tgtgctcggc gccgaagttg ctcgccccaa gcagtaccag cgcgccgcgc
     1801 cgaaggtatg ggcgggagcg gcgtttcggg attgaggcgc ggatcgtcat acggcctccg
     1861 ggacggccgt gttgtcgcgg cattgatgat cgtcccggga gcgaccctga tccgcctcca
     1921 ttgaaacttt cgtgctgcgc cggcgggaca cgagacattc acgcgttcgc tgacgggatc
     1981 aggtcatgca ggccgatctg gcgcaagcgt tcgatatcct ccggcaaatc caagtcccac
     2041 aatgtgaccg gctcttgcca tgtcatgccg aggtctcgca ggcggcgccg ggtttcctcc
     2101 atcacgctcg gcacgctcca gtgcatctct gaaaacagcg tccgggcggg tgcccgcagc
     2161 ccgatgagtg catagccgcc gtcctctgcc ggaatgattg cggcgtcggc gccgccgcgc
     2221 agaatatcgg cggccgcgcg caaatgatcg gccgtgaggg cggggcaatc ggtgccgatc
     2281 acgagcacag gcatatctgc cg
//
LOCUS       DATCWM010000121         2306 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_189894, whole genome shotgun sequence.
ACCESSION   DATCWM010000121 DATCWM010000000
VERSION     DATCWM010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2306
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189894"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1433
                     /locus_tag="VIQ50_02210"
     CDS             <1..1433
                     /locus_tag="VIQ50_02210"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEY9359220.1"
                     /translation="FWGRRIKPASGPFLLEGKNPFGYVYQAGWGVGGAALHYFANFPR
                     LLPNDFKIKSEHGRALDWPISYQDVAPYYDKVAQDVGVSGDAKAEEVWRPAGTPYPMP
                     PMKTFRHGEVWLKGCEAAGIRLVPAAVGMNSTDYKGRPACIYDGWCHVGCPTGALANP
                     LVTYLGEAKKSDAEVRPLSTVTRVLTNAQGNKVTGVEYYDAKKERQVQEASVVVLAAW
                     AAQNPRLLFNSATDKHPKGLANSSGLLGKYMMAHFSSGTWAMFDEDIQSYMGTTGSQF
                     MSYDRYGKTSQKDAFGSSFMVAGTALKTSDLGGFANARLDLFGPDLAAFMKRAARGLT
                     RIGAFGEELPNIENRVEPASDKDEFGMPLAKIVHSFDQDAVALWNANFEEGLKIGKAT
                     GAKEVWSARGNMPTIHLMGGTIMGTQAGDSVTNSYGQTHEIANLYIAGPGIFATAGAS
                     NPTYTILALSLRGAEQLAANWSTVAG"
     gene            complement(1461..>2306)
                     /locus_tag="VIQ50_02215"
     CDS             complement(1461..>2306)
                     /locus_tag="VIQ50_02215"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9359221.1"
                     /translation="SPPRWSPASSLEDMDKSGIATAILSIVQPGIWFGDNVEEARGLA
                     RQLNEYGARLVRDHPGRFGLFAVIAPPDVQGSLKEIEYAFDTLKADGIGLLTSYQSKY
                     LGDASFAPVYEELNRRKAVVYVHPTSPDCCRGLVPGIPPSSIEYATDTTRTIAHLVFS
                     GTAMKFPDIRWIFSHSGGTLPFLTGRFVRLAEERKPANLPEGPLPEFRKFYYELAQGN
                     TPGQIAALLKLVSISQVLYGTDFPFRDGGEVNRGIAEWGFTPADERAIERENALALLP
                     RLRAS"
BASE COUNT          437 a          723 c          749 g          397 t
ORIGIN      
        1 atttctgggg ccggcggatc aagcctgcga gcggtccgtt cctgctcgaa ggcaagaatc
       61 ccttcggcta cgtctatcag gcgggctggg gcgtgggcgg cgcggcgctg cactacttcg
      121 ccaactttcc tcgcctcctg cccaacgact tcaagatcaa gagcgagcac ggccgcgcgc
      181 tcgactggcc gatctcctac caggatgtcg cgccctatta cgacaaggtc gcgcaggacg
      241 tcggcgtgtc gggcgacgcc aaggcggagg aagtctggcg gccggcgggc acaccctatc
      301 cgatgccgcc gatgaagacc ttccgccatg gcgaagtctg gctcaagggt tgcgaagcgg
      361 ccggcatccg cctggtgcct gcggcggtcg gcatgaattc gaccgactac aagggtcggc
      421 cggcttgcat ttacgacggc tggtgccacg tcggctgccc gaccggcgcg ctcgccaacc
      481 cgttggtcac gtatcttggg gaagccaaga agtccgacgc cgaggtgcgc ccgctctcga
      541 cggtcacccg cgtcctaacc aatgcgcagg gcaacaaggt gactggcgtt gagtattacg
      601 acgccaaaaa agagcgccag gtgcaggagg cgagcgttgt cgtgctcgcg gcctgggcgg
      661 cgcagaaccc gcgcctcctt ttcaactccg caaccgacaa gcaccccaag gggctcgcca
      721 attcaagcgg cctcctcggc aaatatatga tggcgcattt ttcctcgggc acgtgggcga
      781 tgttcgacga ggacatccag agttacatgg gcacgaccgg ctcgcagttc atgtcctatg
      841 atcgctacgg caagaccagc cagaaagacg ccttcggcag ctcgttcatg gtcgcgggca
      901 ctgcgctcaa gacgagcgat ctcggcgggt ttgcaaacgc ccgcctcgat ctgttcggtc
      961 ccgatctcgc cgccttcatg aaacgtgcgg cgcgcggact gacccgcatc ggggcgtttg
     1021 gcgaggaatt gcccaacatc gagaaccgcg tcgagcccgc gagcgacaag gatgagttcg
     1081 gcatgccgct ggcgaaaatc gttcatagct tcgaccagga tgcggtcgcg ctgtggaatg
     1141 ccaatttcga ggaaggcctc aagatcggca aagccaccgg tgccaaggaa gtctggtccg
     1201 cgcgcggcaa catgcccaca atccatttga tgggaggaac catcatgggc acgcaagccg
     1261 gcgattcggt caccaacagc tacggacaga cccacgagat cgcgaatctc tatatcgccg
     1321 ggcccggcat atttgcgacc gcgggtgcat ccaacccgac ctacacgatc ctggcactgt
     1381 cgctgcgcgg cgccgaacag ttggccgcga attggagcac ggtggccggt tgagccggcc
     1441 agatcggcaa gggcagggac tcagctcgct ctcaagcgcg gcaacagcgc gagcgcgttc
     1501 tcgcgttcga tggcgcgctc gtcggccggc gtgaaccccc attcggcgat gccgcggttg
     1561 acctccccgc cgtcgcggaa cgggaaatcg gtgccgtaga gcacctgcga gatcgacacc
     1621 agcttcaaca gtgcggcgat ctggcccggc gtgttgcctt gcgccagctc gtaatagaac
     1681 ttcctgaact ctggcaaagg cccctcgggg aggttcgcgg gcttgcgctc ttcggccagg
     1741 cggacgaagc ggccggtcag gaacggcagc gtgccgccgc tgtgggagaa tatccagcgg
     1801 atgtccggaa acttcatcgc cgttccgctg aatacgaggt gggcgatggt gcgcgtggtg
     1861 tcggtcgcgt attcgatcga agacggcggg atgccgggaa cgagcccgcg gcagcaatcc
     1921 ggcgaggtcg ggtggacata aaccacggcc ttgcggcggt tgagctcctc atagaccggg
     1981 gcaaacgaag catcgccgag atatttgctc tggtagctgg tcaacagccc gatgccgtcc
     2041 gccttgaggg tgtcgaaggc gtattcgatc tccttcagac ttccttgcac gtcgggcggc
     2101 gcgatgacgg caaacaggcc gaagcggcca ggatgatctc gcaccagccg ggcgccatat
     2161 tcgttgagct ggcgtgccag accgcgcgcc tcctcgacat tgtctccgaa ccagatcccg
     2221 ggctggacga tcgaaaggat cgcggttgca attccgctct tgtccatgtc ctcgagcgag
     2281 gatgcagggg accatcgcgg cggaga
//
LOCUS       DATCWM010000122         3300 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_82061, whole genome shotgun sequence.
ACCESSION   DATCWM010000122 DATCWM010000000
VERSION     DATCWM010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3300
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82061"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..939)
                     /gene="hemB"
                     /locus_tag="VIQ50_02220"
     CDS             complement(<1..939)
                     /gene="hemB"
                     /locus_tag="VIQ50_02220"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018456862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HEY9359222.1"
                     /translation="MAIKYGRPIESRLAPVEARIKRRPALDLAKRPRRNRKAEWARRL
                     VREHDLSTNDLIWPLFLVDGSNTRMPVDSMPGVERLSVDEAVREAERAATLAIPCLAL
                     FPYTDPKRRDEDGSEALNPDNLVCRAIRAIKQAVPEVGVLCDVALDPYTSHGHDGLLR
                     DGVILNDETVEILVRQAVVEAEAGCDVIAPSDMMDGRVGAIRAALDAAGFTQVQIMAY
                     AAKYASAFYGPFRDAVGSSKTLTGDKRTYQMDPGNSDEALREIELDIAEGADMVMVKP
                     GLPYLDIVRRVKDAFGMPTFAYQVSGEYSMIMAAVQN"
     gene            1167..2189
                     /locus_tag="VIQ50_02225"
     CDS             1167..2189
                     /locus_tag="VIQ50_02225"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9359223.1"
                     /translation="MRVGPIVRAVALLLLCPIAQAQAQNPAAFYKGKSVDLYIGYSAG
                     GGYDVYARALARHMGRFIPGNPTIVPKNMPGAGSLVLANWLYNVAAKDGTAFGMIGRG
                     TAFDPLLGSTKAQFDAVKFNWIGSMNDEVSVCVAWHTSGIAKLEQVVQNELTVGGTGP
                     AADTDQFPKVLNATIRTKFKIIPGYPGGNDIDLAMERGEVMGRCGWSWSSVIATHKSW
                     LDEKKINVLVQLSLNKHADLPDAPLVMDFAKTDEQRQIFKLVFARQPMGRPFLAPAGV
                     PAERTATLRKAFMDTMTDPGFLAEAEKMKLEINPVSGEAVQAILQDVYQTPKSIAAAV
                     ADILNH"
     gene            2385..>3300
                     /locus_tag="VIQ50_02230"
     CDS             2385..>3300
                     /locus_tag="VIQ50_02230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY9359224.1"
                     /translation="MDFELTEEQRAIKDTARAFAREKMLPFARQWDEDEVFPVDTLRQ
                     AAALGFGGIYVAADVGGSALSRLDAVLIFEELAQGCPSTAAYLSIHNMVAWMIDAYGS
                     SELRRRFLPDLCSMAKFASYCLTEPDSGSDAASLKTRAQRRDDHYLLDGTKAFISGGG
                     RADLYLVMARTGEGGPHGISCFVVESGTPGLSFGAQEKKLGWHSQPTAMVIFEACRIP
                     LANRVGAEGEGFKIAMRGLDGGRLNIAACSLGGAQFCLERTIAHMRERKQFGTRLADF
                     QALAFRIADYATGLEASRLMLYRAADALD"
BASE COUNT          581 a         1061 c         1057 g          601 t
ORIGIN      
        1 gttctgcacc gccgccatga tcatcgagta ctcgcccgac acctgatacg cgaaggtcgg
       61 cataccgaac gcatccttca cgcggcgcac gatgtcgaga tagggcaggc cgggcttcac
      121 catcaccatg tcggcgccct cggcgatgtc gagctcgatc tcgcgcagcg cttcgtcgga
      181 attgcccggg tccatctggt aggtgcgttt atcgccggtc aaggtcttgg atgagccgac
      241 cgcgtcgcgg aacgggccgt agaaggccga ggcgtatttc gccgcatagg ccatgatctg
      301 cacctgggtg aagccggcgg catcgagcgc ggcgcggatc gcgccgacgc ggccgtccat
      361 catgtcggag ggcgcgatga cgtcgcagcc cgcctcggcc tcgaccaccg cctgccgcac
      421 caggatttcg accgtctcgt cgttgaggat cacgccgtcg cgcaacagcc cgtcatggcc
      481 gtggctggtg tagggatcga gcgccacatc gcaaagaacc ccgacctccg gtaccgcctg
      541 cttgatggcc cttatcgcgc gacagaccag attgtccggg ttgagcgcct cgctcccgtc
      601 ctcgtcgcgc cgttttggat cggtatatgg aaacagcgcc aggcagggaa tcgccaacgt
      661 cgcggcccgc tcggcttcgc gcaccgcctc gtccaccgaa agccgttcga cgccaggcat
      721 ggaatcgacc ggcatgcgcg tattcgatcc atcgacgagg aataacggcc agatcagatc
      781 gttcgtgctc aagtcgtgct cgcggacgag ccgccgcgcc cattcggcct tgcggttgcg
      841 gcggggccgc ttggcgagat cgagagcggg ccggcgcttg atcctggcct cgaccggggc
      901 aagacgagat tcgatcggcc ggccgtattt gatggccatt acggtgctcc cgggtgaaga
      961 tactgcctgt tgtagcgcct ctgcggcgtg cccgccagcg cgcgaagacg gtggttgctc
     1021 tcgtccgctc acgcctgcat gtttgataca acagcgcgag gtgatcgctg agcaagccgg
     1081 gtgcgaccga gggccctctg gcccgccttt ggaggcggag gcaacatcgg tgaggcggca
     1141 ttccatgccg gcaacgggag gacggtatgc gtgttgggcc aatagtccgc gccgtcgcgc
     1201 tactgctgct ctgcccgatc gcgcaggccc aggcgcaaaa cccggcagcg ttctacaagg
     1261 gcaagagcgt cgatctttac atcggctata gcgccggcgg cggatatgac gtctacgccc
     1321 gggcgcttgc gcgccacatg gggcgtttca ttccgggcaa tccgacgatc gtgccgaaga
     1381 acatgccggg tgccggcagc ctcgtcctcg ccaactggct ctacaatgtc gcggccaagg
     1441 acggcaccgc atttggcatg atcggacgcg gtacggcttt cgatcccttg ctcggttcca
     1501 cgaaagcgca attcgacgcg gtcaagttca actggattgg tagcatgaac gacgaagtca
     1561 gcgtctgcgt cgcctggcac accagcggca tcgccaagct cgaacaagtg gtgcagaacg
     1621 agttgaccgt cggaggaacc gggccggctg ccgataccga ccaatttccc aaggtcctca
     1681 atgccaccat ccgtaccaag tttaagatca tccccggcta ccccggtggc aatgacatcg
     1741 atttggccat ggagcgcggc gaggtgatgg ggcgctgcgg ctggtcttgg tcgagcgtga
     1801 tcgcaaccca caaaagctgg ctcgatgaaa agaagatcaa tgttctggtg cagctctctc
     1861 tgaataaaca cgctgacctg ccggatgccc ctctcgtcat ggattttgcg aaaactgacg
     1921 agcagcggca gatcttcaag ctcgtgttcg cccgccagcc gatgggacgg ccgtttctag
     1981 cgcccgcggg cgttcccgcg gagcgcacgg caaccctgcg caaggccttc atggacacga
     2041 tgacggatcc cggctttctc gccgaagcgg aaaaaatgaa attggaaatc aacccggttt
     2101 caggcgaggc ggtgcaggcc atcctgcagg acgtctatca aacgccgaaa tcgattgcgg
     2161 cggcggtcgc tgacatcctt aaccactagc actagcgcgt tgaccagctt ccagtgtctg
     2221 ccgaggcgac gccatgcccg tggttgccgc ccgggacgat cgcgccgcgt gtgcgggagc
     2281 tgatgatatc gatcgcggca tcctgcctcg gacggtcgag cgttgtgccg ccgccccccg
     2341 ctggtcgatt gacggtccaa tgcgtggtcg ctatcggtcg ccgcgtggac ttcgaactca
     2401 ccgaggaaca gcgggccatc aaggataccg ctcgtgcctt cgcgcgcgag aagatgttgc
     2461 cgttcgcgcg ccaatgggac gaagacgagg tcttcccagt cgacacgctg cggcaggcgg
     2521 cggcgctcgg cttcggcggc atttatgtgg cagccgacgt cggcggctcc gcgctctcgc
     2581 gacttgacgc tgtgctgatc ttcgaagagt tggcgcaagg ctgtccctcg actgccgctt
     2641 atctgtcgat ccacaacatg gtggcgtgga tgatcgatgc ttacggctcg agcgagctgc
     2701 ggcgacgttt tcttcccgac ctctgcagca tggcgaagtt cgccagctac tgcctcaccg
     2761 agccggactc gggctccgat gccgcaagcc tgaagacccg cgcgcagcgc cgggacgatc
     2821 actatctgct cgacggcacc aaggcgttca tctccggcgg tggccgggcc gatctttatt
     2881 tggtgatggc gcgcaccggg gaaggggggc cgcacggcat ttcttgcttc gtggtcgaga
     2941 gcggcacgcc agggctgagc tttggggcgc aggagaagaa gcttggctgg cactcgcagc
     3001 cgaccgccat ggtcatcttc gaagcttgcc gcatcccgct cgcaaaccgc gtcggcgccg
     3061 agggcgaagg cttcaagatc gccatgcgcg ggctcgacgg cgggcgcctc aatatcgccg
     3121 cctgctcgct cggcggcgcc cagttctgtc tcgagcgcac catcgcccat atgcgagaga
     3181 ggaagcagtt cggcacgcgg ctcgcagact tccaggcgct cgcctttcgc atcgccgact
     3241 atgcgaccgg actcgaagca tcgcgactga tgctctaccg ggcggccgac gcgctcgacc
//
LOCUS       DATCWM010000123         2219 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_114417, whole genome shotgun sequence.
ACCESSION   DATCWM010000123 DATCWM010000000
VERSION     DATCWM010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2219)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2219)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2219
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114417"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..715)
                     /locus_tag="VIQ50_02235"
     CDS             complement(<1..715)
                     /locus_tag="VIQ50_02235"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEY9359225.1"
                     /translation="MSRWRIQAPTTALLAVLVATTTSQPVHARDLQPFATGTPEQVGM
                     SAERLGRITTMLKKEIADGKLPGVVVMVARKGKIIYSDAVGFQDKGANTPMQPDAIFR
                     IYSMTKPLASVAAMMLVEDGVIQLTDPISKFLPAFKDMQVSVAAPGADGKAAYTNVPS
                     AKPVIVQDLLRHSAGLAYAEITKNEPVKAAYVEAKFSQPGIHEYDSRGMTPAGQVERI
                     AKVPLIHQPGTTWEYSMAVD"
     gene            1163..2158
                     /locus_tag="VIQ50_02240"
     CDS             1163..2158
                     /locus_tag="VIQ50_02240"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359226.1"
                     /translation="MREVRFKTRREFVALLGGAAVPSFVWPFLARAQHAPKVAVVGAL
                     VIGNTDPEQFWREFRQGLRELGYIEGQNIRYEFRSAQGQLSRLPELAAELVHLKVDVI
                     VTWFTPAAQAAKQATHEIPIVMADTGDPIGTGLVASLPRPGGNVTGIASVSAELAGKS
                     VQLIRDMLPSARRVTALANATDPFAKPSLEQIQLGAEVTGTTINAVRISSNEELESAF
                     AAMDKDRPDAVIVQPSLPSKRAAELALKQRVPAVSVPRWFAEEGGLMAYSPKFTELYR
                     RAAAYVDKILKGAQPADLPVEQPTYFELVINMRTAKALGLTIPPDLLARADEVIE"
BASE COUNT          396 a          692 c          706 g          425 t
ORIGIN      
        1 tgtcgacggc catgctgtat tcccacgtcg tgccgggctg atgaattagg ggcactttgg
       61 cgatgcgctc gacctgcccg gccggcgtca tgccgcggga gtcgtattcg tggatgcccg
      121 gctgggagaa cttggcctcg acataggccg ctttcaccgg ctcgttcttg gtgatctccg
      181 cataggcgag acccgcgcta tgccgcagaa ggtcttgcac gatgaccggc tttgccgacg
      241 gtacgttcgt ataagcggct ttgccgtccg caccgggcgc cgctacgctc acctgcatgt
      301 ctttgaaagc cggcaagaac ttggagatcg gatcggtgag ctgaatgacg ccgtcttcga
      361 ccagcatcat cgccgccacc gacgcaagcg gcttggtcat cgaataaatg cgaaagattg
      421 catcaggctg catgggcgta ttcgcgccct tgtcttggaa gccgacggcg tccgaataga
      481 tgatctttcc tttgcgggcg accatcacga ccactcccgg cagcttgccg tcggcaattt
      541 cttttttgag cattgtggtg atgcgcccga ggcgctccgc cgacatgccc acctgttcgg
      601 gcgtgcccgt ggcgaagggt tgcaggtccc gcgcgtgcac cggctgcgac gttgtcgtgg
      661 cgacgagcac cgccagcagt gccgtcgtcg gggcctgtat tctccacctg gacatgacgt
      721 tcctcccgtg accgtttctg cgagggtcga gttgtcgatc cgccgacgac cttacccgac
      781 atcgtcgttt cgggacatgc tgggcggtgc gagcaggctt gatctgctgc cgttgccgag
      841 cagcgagagg atgtcccggc gacggcgcgc ggcggcgaac atggctcgca gcctccgcag
      901 cagccgtgac ggcaattatc accccctcgc cgccttcggg gatggccgag cgcttggcta
      961 cgcagaaacc ggccgggcgc ataacctttt gatgaaaaga caaattttga tgacttaacg
     1021 tgcgtggggg acgcggcggc tcgatcgatt cagaacgatt cagatcggcc caaagacctt
     1081 gccggatgcc ttgagatagg ctgaatgtgc tggaaaccgt gcgcgcgagc cctcgcgcgt
     1141 actacggctc gcggtgcgac aaatgcggga agtccgattc aaaacgcggc gggagttcgt
     1201 cgcgctgctc ggcggcgcgg cggtgccttc gtttgtttgg ccgtttctcg cgcgcgcaca
     1261 gcatgcgcct aaggttgctg tcgtgggcgc cttggtcatc ggcaataccg atccggagca
     1321 gttttggcgg gagttcaggc aggggctgcg cgagctcggg tacatcgaag ggcaaaacat
     1381 tcgatacgaa tttcgatcgg cgcaagggca gctcagccgg cttcccgaac tggccgccga
     1441 gttggtccat ctcaaagtcg acgtcatcgt cacctggttc acgccggccg ctcaggcggc
     1501 aaagcaagcc acgcacgaaa tccccatcgt catggccgac acgggagatc cgatcggcac
     1561 gggactcgtc gcgagccttc ctcggccggg cggcaacgtc accggaattg cgagcgtcag
     1621 cgcggaactc gccggcaaaa gcgtccaact catccgcgac atgctgccgt cggcgcgtcg
     1681 cgtcaccgct ctcgcaaatg cgaccgatcc ctttgcaaaa ccctccctcg aacagatcca
     1741 gcttggcgct gaagtcactg gaacgacgat caacgcggtc aggatcagca gcaatgagga
     1801 attggagtcc gctttcgccg cgatggacaa ggaccgcccc gatgccgtca tcgtgcaacc
     1861 gagcctgccg agcaagcgcg ccgccgagct tgcgctgaag cagcgcgtgc cggcggtctc
     1921 ggtgccgcgg tggttcgccg aagaaggcgg gttgatggca tactccccaa aatttacgga
     1981 gctttatcgt cgggccgctg cgtacgtcga caaaatcctc aaaggcgccc agccggccga
     2041 tctgccggtc gagcagccaa cctatttcga gctggtcatc aatatgcgca ctgccaaggc
     2101 gctcgggttg acaataccgc ccgaccttct ggcgcgcgcg gacgaggtga tcgagtgagg
     2161 caccgtcggt tcggacgccg tgagttcatc gcgctcctcg gtggcggcgc ggcagccgc
//
LOCUS       DATCWM010000124         2369 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_308735, whole genome shotgun sequence.
ACCESSION   DATCWM010000124 DATCWM010000000
VERSION     DATCWM010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2369
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_308735"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..720)
                     /gene="purC"
                     /locus_tag="VIQ50_02245"
     CDS             complement(<1..720)
                     /gene="purC"
                     /locus_tag="VIQ50_02245"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020092484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HEY9359227.1"
                     /translation="MSRRRRIYEGKAKVLYEGPEPGTLIQHFKDDATAFNAKKHDVIE
                     GKGVLNNRISEYVFQHLNDIGVPTHFIRRLNMREQLIREVEIIPLEVVVRNVAAGSLS
                     QRLGLEEGTQLPRSIIEFYYKNDQLGDPMVSEEHITAFGWAAPQEIDDIMALAIRVND
                     FLSGLFLGVGIRLVDFKMETGRLWENDLMRIVVADELSPDSCRLWDIKTNDKLDKDRF
                     RRDLGGLLEAYTDVAKRLGIMA"
     gene            1063..1386
                     /locus_tag="VIQ50_02250"
     CDS             1063..1386
                     /locus_tag="VIQ50_02250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1476 domain-containing protein"
                     /protein_id="HEY9359228.1"
                     /translation="MTTFDKREEGFEKQFAVDEELRFKANARRNKMLGLWAAQKLGLS
                     GAEADEYAKAIVLADFEEPGEDDVFRRIRKDFDEKGITDSDHQIRRTMTELMAKAVLE
                     IKAGR"
     gene            1509..2288
                     /locus_tag="VIQ50_02255"
     CDS             1509..2288
                     /locus_tag="VIQ50_02255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEY9359229.1"
                     /translation="MTTATAFSLAGRLKAGETVYSGWCGLPAPIVAELVGREGFPAVT
                     LDAQHGLWDIATLVAGIAQVRQGGAAAMVRIPVGQFATASRALDFGAEGIIAPMINTP
                     ADARAYVSFAKFPPLGERSWGPHRATTLANMADQKVYLREANALTVAFAMIETKTALD
                     NVEAIAATPGIDALFLGPADLSIALSNGADVDPMSLQVDRELDRIMGAAHKAGKVMGA
                     YCHSAERAAALAKRGVRFLAVGSDMGFLRAGAAAAIKALKS"
BASE COUNT          410 a          779 c          771 g          409 t
ORIGIN      
        1 cgccatgatt cccagccgct tggcgacatc cgtataggcc tccagcaacc ccccgaggtc
       61 gcgccggaag cggtccttgt cgagcttgtc gttggtcttg atgtcccaca gccggcacga
      121 atcgggggac aactcgtccg ccaccacgat ccgcatgaga tcgttctccc acagccggcc
      181 ggtctccatc ttgaagtcga ccagacggat gccgacccca aggaacagcc cggagaggaa
      241 atcgttgacg cggatggcga gcgccatgat gtcgtcgatc tcctgcgggg cggcccagcc
      301 gaacgcggtg atgtgctcct cggagaccat cgggtcgccg agttgatcgt tcttgtaata
      361 aaactcgatg atggagcgcg gcagctgcgt gccctcctcc agcccgagcc gttgcgacag
      421 cgaccccgcc gcgacgttgc gcacgacgac ttcgagcgga atgatctcga cctcgcggat
      481 caactgctcg cgcatattga gccggcggat gaagtgagtc ggaacgccga tgtcgttcaa
      541 atgctggaac acgtattcgg agatgcggtt gttgaggacg cccttgccct cgatgacgtc
      601 gtgcttcttc gcattgaagg cggttgcatc gtccttgaag tgctggatca gcgttcccgg
      661 ctcgggtccc tcgtagagaa ccttggcctt gccttcatag atgcggcgac gacggctcat
      721 cggcgtgtac cgtggtttgt ttatgtccat ctggatgccg tggctccggt tcgagtcgca
      781 gcgcgcgagg cgactcgacc aaacgtggac attgcggtgc gcgtccacgg cggcaagcta
      841 gccgatcgcg ctgcgcagca caatcgcggt gaatcgcttt attgcgcacg ttccaccgcg
      901 gcgaatcgat tcgccatcgg ttgccttgac gatcgtgtcc cgctatgcaa gggcgcgcac
      961 ggtggttcca cctcggttgt gcaaaccacc cgatgcgacg cggcgcgcca cccggccgaa
     1021 atatcggtgc gagagcggcc gctgccgatg agcgaggatg cgatgaccac attcgacaag
     1081 cgcgaggaag gcttcgagaa gcaattcgcg gtcgacgagg agttgcgttt caaggcgaat
     1141 gcgcggcgca acaagatgct gggcctgtgg gcggcgcaaa agctcgggct ctccggggcc
     1201 gaggccgacg agtatgccaa ggcgatcgta ctcgcggatt tcgaggagcc gggcgaggac
     1261 gatgtgttcc gcaggattcg caaggacttt gacgagaagg gcatcacgga ctccgatcac
     1321 cagattcgcc gcaccatgac cgagctgatg gcgaaggcgg tcctggagat caaagccggc
     1381 cgctgacggt tcctgcgtga tgcgcgacgt tctccgccgg cgcggtcgct cgcagcaagg
     1441 gacgatctca tgtgcgtgat gcgcgacgtt ctccgccggc gcggtcgctc gcagcaaggg
     1501 acgatctcat gaccactgca accgccttct cgctcgccgg ccggctcaag gccggcgaga
     1561 ccgtctacag cggctggtgt ggcctgcccg cgccgatcgt cgccgagctc gtcgggcgcg
     1621 aaggctttcc cgcggtcaca ctcgacgcgc agcacggact ctgggacatc gccacgctgg
     1681 tcgccggcat cgcccaggtg cgccagggcg gcgccgcggc gatggtgcgc attcccgtcg
     1741 gccaatttgc aaccgccagc cgcgcgctcg atttcggcgc cgagggcatc atcgcgccga
     1801 tgatcaacac gcccgcggac gcgcgcgcct atgtctcgtt cgcgaaattt ccgccgctgg
     1861 gagagcgcag ctggggcccg caccgcgcca ccacgctcgc caacatggcg gatcagaagg
     1921 tttatttgcg cgaggccaac gcgctcaccg tcgccttcgc catgatcgag accaaaaccg
     1981 cgctcgacaa cgtcgaggcg atcgccgcga cgcccggcat cgacgcgctt ttcctcgggc
     2041 cggctgacct ctcgatcgcg ctgagcaacg gcgccgacgt cgacccgatg tcgttgcagg
     2101 tcgaccgcga gctcgaccgg atcatgggag cggcgcacaa ggccggcaag gtcatgggcg
     2161 cttattgcca ctcggccgag cgcgcggccg cgctcgccaa gcgcggcgtg cgcttcctcg
     2221 cggtgggcag cgacatgggc ttcttgcgcg caggcgccgc ggcggcaatc aaagcactga
     2281 agagctgacg gcgctgcgct caacgcgcgc tactgatcct cggcgatcgc tcgcgccaag
     2341 tcgtcgagca ccacctgcag ccccgcctc
//
LOCUS       DATCWM010000125         3032 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_438356, whole genome shotgun sequence.
ACCESSION   DATCWM010000125 DATCWM010000000
VERSION     DATCWM010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3032
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_438356"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..1052)
                     /locus_tag="VIQ50_02260"
     CDS             complement(72..1052)
                     /locus_tag="VIQ50_02260"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9359230.1"
                     /translation="MSERCRMPCCLLGLLIVLLAGCGHALAQSWPSRPIRAIVPFGAG
                     SATDVVPRVVLEPLSAQLGQPIVVENRGGAGTTIGAAIVAKSDPDGYTLLATSSAHTL
                     VPTVYPHAPYDTAADFAAVVSLGMSPNVLVVSPAKGFKTAHDLVAAAKARPGALNFAS
                     AGVGTATHLSAERFRMAAGIEAVHIPFRGGAESITEVLSGRADFLFTPLGTALPQVRA
                     GNLVALAVSSPKRAALLPEVPSVLELFPNSDYPFWIGIFMPAKTPGDIVEKFHHEAVK
                     TMQFPNVKERLQTLGMEPMPLTPAEFDARVRAEIGTTGVLAKAAGLQPSQ"
     gene            1467..2105
                     /locus_tag="VIQ50_02265"
     CDS             1467..2105
                     /locus_tag="VIQ50_02265"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011924238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEY9359231.1"
                     /translation="MLVARGILLALAGLALAGCMQSGPVFDANFTPRDRQQLANPPYQ
                     QAYIAPAYRRQIVDFPRKEAPGTIVVDSDARYVYFVLPERKAVRYGAIVGEKGWSGVA
                     TVARKEEWPGWTPTEGEKRRLGPLPNYVEGGAANPMGARALYLYANGQDTLYRIHGTN
                     QPGWIGHAISSGCIRLTNEDVIDLYSRVKTGATVVVLGPNQGASRLVSASAQ"
     gene            complement(2125..2739)
                     /locus_tag="VIQ50_02270"
     CDS             complement(2125..2739)
                     /locus_tag="VIQ50_02270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359232.1"
                     /translation="MNAALDHLDQFSIFGRSSIALFLILGLDWAFSAIHAYEEWRGEE
                     APLWRVFGAIVGLLVPNWVGFFFFTLVLTLALWGAGLAGICGCLPLVGHWLPATVGAL
                     GVIIGARISDTLVSHWGLYALGYRPNPGLKSTPLYVVEAVFIALTFWKGLSLAPGAAW
                     TGIAVGAVVFVLVLPVMRAFRAIRPSSARAPWIRWQPLPAWTKE"
BASE COUNT          625 a          974 c          937 g          496 t
ORIGIN      
        1 gtcagtcatc catcgatcgt ccttcgtctc ccgcaacacg gatgacgacg agcattgcgc
       61 ttcagtgccg atcattggct gggctggaga cccgccgcct tggccagtac gccggtggtg
      121 ccgatttccg cccgcacgcg ggcgtcgaac tcggccggcg tcagcggcat cggctccatg
      181 ccaagcgtct gcaggcgctc cttgacgttg ggaaactgca tggtcttcac cgcttcgtgg
      241 tggaatttct cgacgatgtc tcccggcgtc tttgccggca tgaagatgcc gatccaaaac
      301 gggtagtcgg aattgggaaa gagctcgagc acgctcggca cttcgggcaa gagcgccgcc
      361 cgtttcgggc tgctgaccgc aagcgcgacg agattgccgg cgcgaacctg gggaagcgca
      421 gtccccagcg gggtgaaaag aaagtccgcg cggccggaca ggacctcggt gatcgactcg
      481 gcgccgccgc gaaacggaat gtgcacggcc tcgatgccgg ctgccatgcg aaagcgctcc
      541 gcgctcaaat gcgtggcggt gccaacccca gccgaagcga aattcaaggc gccgggccgc
      601 gccttggccg cggcgaccag atcgtgcgcc gtcttgaagc ccttcgccgg cgagaccacc
      661 agcacattcg ggctcattcc gagcgagacc accgcggcga aatcggcggc ggtgtcgtac
      721 ggtgcatgcg gataaacggt cggcaccaac gtatgcgccg aagatgtcgc gagcagcgta
      781 tagccgtcgg ggtccgactt ggcgacgatc gcggcgccaa tggtcgtgcc cgcgccgccg
      841 cggttctcga cgacgatggg ttgccccaac tgcgccgaca aaggctccag cacgacgcgc
      901 ggcacgacgt cggtggcgct gccggcgcca aacgggacga tcgcgcggat cggtctgctc
      961 ggccagcttt gggcgagcgc atgaccgcac ccagcgagca ggacgatcaa cagcccgagc
     1021 aaacagcacg gcatgcggca gcgctcgctc atgggtcagt gctcctccgg atgcgcatcg
     1081 tttgcattga agaaaaaaag catagcacgc caaagattcc gcagcagccg gcggcaacat
     1141 cgcacgagtg cagaaatgtc acaggtgggg aatctcgagt ccaagatgtt gcgaagttga
     1201 tgagctgcag ttagcatctg catggatcac ggtttcgcca gacccgtgat cggcgctgca
     1261 caagaaagcc cctggggacc tgccacggcc ctgggggttt tcctttggcg aacatgctcc
     1321 atcgcgcttg caacgacgaa aacgatccgt agccgcaccg tccgccggaa ctgacatttg
     1381 catcggatgt gactgatttg tcacagactg cgttgcggca aatcagttag actttggcac
     1441 cctgatttgg gcttcggggg gaatcgatgt tggtcgcgcg cggcatcttg ctcgctttgg
     1501 ctggactagc gcttgctggc tgcatgcaat ccggcccggt gtttgacgcc aatttcacgc
     1561 cgcgcgatcg gcagcaactg gcgaacccgc cgtatcagca agcgtacatc gcacccgcct
     1621 atcggcgtca aatcgtcgac ttcccgcgca aggaagcgcc aggaacgatc gtggtcgata
     1681 gcgacgcgcg ctacgtttac ttcgtgcttc ccgagcgcaa ggcggttcgc tacggcgcca
     1741 tcgtcggcga gaagggatgg tccggcgtgg ccacggtcgc ccgcaaggaa gagtggccgg
     1801 gatggacgcc gaccgaaggt gagaagcgca ggctggggcc gcttccgaac tacgtcgaag
     1861 gcggcgcagc caatccaatg ggcgcccgcg cgctctacct ttatgccaac ggccaagaca
     1921 cgctctatcg catccatggc acgaaccagc ccggatggat cggacatgcg atctcgtcag
     1981 gctgcatccg gttgaccaac gaggatgtga tcgatctcta cagccgggtg aagaccggcg
     2041 cgaccgtggt ggtcttggga ccaaatcagg gagcgtcgcg tctggtgtcg gccagcgccc
     2101 aataggcgcc ccctaatctg gacgtcactc tttcgtccac gccggcagcg gctgccatcg
     2161 aatccaaggc gcgcgcgccg aggagggccg aatcgccctg aacgcccgca tcaccggcaa
     2221 caccagcacg aaaacaaccg cgcccaccgc aatgcctgtc cacgccgcac ccggagcaag
     2281 cgagaggcct ttccaaaatg tcagcgcaat gaaaaccgct tcgaccacgt agagtggcgt
     2341 agacttgaga ccaggattcg ggcggtagcc cagcgcataa agcccccaat gtgacaccag
     2401 cgtgtcggat atccgcgctc cgatgatcac ccccagggcg ccgaccgtcg ccggcagcca
     2461 atgtccaaca agcggcaggc agccgcagat gccggccagg cccgcgcccc acagcgcaag
     2521 cgtcagcacc agagtgaaaa agaagaaccc gacccaattg ggcaccaaca gcccgacaat
     2581 cgcgccgaaa acgcgccaga gcggcgcttc ttcacctcgc cattcctcat aggcatgaat
     2641 ggctgaaaat gcccagtcga gaccgaggat gaggaacaac gcaatcgaag aacggccaaa
     2701 gatcgaaaat tgatcgagat gatccaaggc ggcattcatg tctcaccctt ccccggcaag
     2761 ggcccgacgt tgcttgcaat tacacgtcga tcagcatagc acgtcgacgg attaaccgca
     2821 gcgacatccg gggccacgtt cacgtgcgca tccgcgacgc ctgattacgc ctcgctcaat
     2881 ccgggctttc aagatttctc ccgctggttt caagaatcgg ccttcccgcg aatgaggcgg
     2941 acgtattttc cagccgcgat gggcgtgttg ctcgcttgcg ccgtcggcgc ggcggcggcg
     3001 caagcggccg gaccgccggc cgattacaaa ct
//
LOCUS       DATCWM010000126         3118 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_189929, whole genome shotgun sequence.
ACCESSION   DATCWM010000126 DATCWM010000000
VERSION     DATCWM010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3118
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189929"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..479
                     /locus_tag="VIQ50_02275"
     CDS             <1..479
                     /locus_tag="VIQ50_02275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008596279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pirin-like C-terminal cupin domain-containing
                     protein"
                     /protein_id="HEY9359233.1"
                     /translation="EIVDDDGTRVRVVCGEFWGRRGPVEGVAADPRYLDVWVPPLRRK
                     VLPVETVRHAFAYVFEGSGTFSSASAPFGVLTERAAGASETLIRERTGNRSLVVFDRG
                     DEVTVEAGEEGIRFLLVSGKPIEEPVAWYGPIVMNTQAELRQAFTELNNGTFIKKR"
     gene            619..1539
                     /locus_tag="VIQ50_02280"
     CDS             619..1539
                     /locus_tag="VIQ50_02280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HEY9359234.1"
                     /translation="MSWMPSTDPVLGDKRACDALELVIVPRVRDLGDGFSVRRALPHG
                     KRQMVGPFIFFDQMGPVQFIAGQGLDVRPHPHIGLATVTYLFDGRVMHRDSEGNALEI
                     TPGAMNLMTAGRGIAHSERSPAAARRGSEGMFGIQSWIALPRAHEETEPSFQHFDADS
                     LPVTEDGGVWARVIAGAAFGMKSPVGMLSEWLYAEVVLAPGASAPLDPDQEERAIYVA
                     EGEVDIAGDTFEAPRLLIFRPGDRITVRALRHARLMLLGGAALEGPRYIWWNFVSSRQ
                     ERIEQAKEDWKMGRFAPVPNETEFIPLPEN"
     gene            complement(1588..2559)
                     /locus_tag="VIQ50_02285"
     CDS             complement(1588..2559)
                     /locus_tag="VIQ50_02285"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase family protein"
                     /protein_id="HEY9359235.1"
                     /translation="MKIVIPDDYQNMVDRLACFALLRGHDVVRYRAPARNAEELAERL
                     RDADVVVAIRERVEFSRALLEQLPRLKLIALVGRNARTIDFSACTELGIAVATGTSNS
                     PVAPAELALALMLASRRNVVFEAERMRRREWPSTLSHRLRGSTLGIFGLGAIGELVAQ
                     GGRGMGMEVLVWGQKSSLEKAAAAGYARAASKAALFERSDVLSLHVRLTPETHGVVGA
                     DDLDRMKATALIVNTARAELIAPGALLAALRRGRPGYAAVDVYEDEPVVDHPFLSMPN
                     VLCTPHLGWAEWENFELYFREAFEQIVACERGLPLRLANPQVRVRPP"
     gene            complement(2734..>3118)
                     /locus_tag="VIQ50_02290"
     CDS             complement(2734..>3118)
                     /locus_tag="VIQ50_02290"
                     /inference="COORDINATES: protein motif:HMM:NF036686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359236.1"
                     /translation="RLGVTRIAIAAPWSKTMDVPMVRFMEASGFTVVSSEVAGYVAGV
                     ELGRAGAQAAYELGRRADRPDAEAVIMPGGNWPAMSVVARLERELGKPVLANNAVSLW
                     AGLRLLKCGEPIAGHGLLLREHLAD"
BASE COUNT          527 a         1034 c         1055 g          502 t
ORIGIN      
        1 cggaaatcgt cgacgacgac ggcacgcggg tgcgcgtcgt ttgcggcgag ttctgggggc
       61 ggcgcggtcc ggtcgagggc gtcgccgccg atccgcgcta tctcgatgtc tgggtcccgc
      121 cgctgcggcg caaagtcctg ccggtcgaga ccgtgcgaca cgcctttgcc tatgtgttcg
      181 aaggctccgg aacgttcagc tcggcgtcgg cgccgttcgg cgtgctgacg gaacgcgcag
      241 cgggcgcgag cgaaacgctg atccgcgagc gaacgggaaa tcgttcgctg gtggtgttcg
      301 atcgcggcga cgaggtgacg gtcgaggccg gcgaggaggg catccggttc ctattggtct
      361 cgggcaagcc gatcgaggag ccggtagcgt ggtacggccc gatcgtgatg aacacccagg
      421 ccgagctgcg gcaggccttc accgagttga acaacggcac gttcatcaag aaacggtgag
      481 cgccagcagc cgaatatgag cgcaaccatc acctctttct ccgcagggcg gtgacccccg
      541 accgccatcg gggttaactg ctcgcgacga accccggcgc gacacacgcg cgctgacgaa
      601 gaagaaggga ggattgccat gagctggatg ccctcaaccg accccgtgct cggcgacaag
      661 cgcgcctgcg atgcgctcga gctcgtcatc gttccgcgcg tgcgcgatct gggcgacggc
      721 ttctccgtgc gccgcgcgct gccgcacggc aagcggcaga tggtcggtcc cttcatcttc
      781 ttcgaccaga tggggccggt tcagttcatc gccgggcagg ggctcgacgt gcggccgcac
      841 ccgcatatcg ggctcgccac cgtcacttat ctattcgacg gccgcgtcat gcaccgcgac
      901 agcgagggca atgcactgga gatcactccc ggcgcgatga acctcatgac cgccgggcgc
      961 ggcatcgccc actccgagcg cagcccagcc gccgcgcggc ggggcagcga gggcatgttc
     1021 ggcattcaaa gctggatcgc gttgccgcgc gcgcacgagg agacggagcc ctcgtttcag
     1081 catttcgatg ctgacagcct gcccgtgacc gaggacggcg gcgtatgggc gcgcgtcatc
     1141 gccggcgccg ccttcggcat gaaatcgccg gtcggaatgc tttcggaatg gctttatgcc
     1201 gaggtcgtgc tcgcgcccgg cgcgagtgcg ccgctcgatc cggatcagga agagcgcgca
     1261 atctatgtgg ccgaaggcga agtcgacatc gccggcgaca cattcgaagc gccgcggctt
     1321 ttgatcttcc ggcccggcga ccgcatcacg gtgcgggcat tgcggcacgc gcggctcatg
     1381 ctcctcggcg gcgccgcctt ggagggcccg cgctacatct ggtggaattt cgtgtcctcg
     1441 cgccaggagc gcatcgagca ggcgaaggaa gactggaaga tgggacgctt cgccccggtg
     1501 cctaacgaga ccgaattcat cccgctgccg gaaaattaga tcgtggtcga cgcggcccta
     1561 acgtaatccc agcacacccg aagaagctca aggaggtcgc acgcgcactt gcggattggc
     1621 gagccgcagc gggagccctc gctcacaggc gacgatctgc tcgaacgcct cgcggaagta
     1681 gagttcgaaa ttttcccatt ccgcccagcc gagatggggc gtgcagagga cgttcggcat
     1741 cgacaggaaa ggatggtcga cgaccggctc gtcttcgtac acatcgacgg cggcatagcc
     1801 gggccggccc ctgcgcagcg ctgcaagcaa cgcccctggt gcaataagct cggcccgcgc
     1861 ggtgttgacg atgagcgcgg tcgccttcat gcggtcgaga tcgtcggcgc cgacgacgcc
     1921 gtgcgtctca ggcgtgagcc gcacgtgcaa ggagaggaca tcggagcgct cgaacagcgc
     1981 cgctttgctg gcggcgcgcg cgtagcccgc ggcggcggct ttctccagcg aagatttttg
     2041 cccccagacc agaacctcca ttcccatccc gcggccgcct tgcgccacca gctcgccgat
     2101 ggcgccgagg ccgaaaatgc cgagcgtcga tccgcgcagc cgatgcgaca gggttgaggg
     2161 ccattctcgt cgccgcatgc gctcggcctc gaagaccacg ttacggcgtg acgccagcat
     2221 cagggcgagc gcaagctcgg ccggcgccac cggtgagttg ctcgtgccgg tcgcgaccgc
     2281 gatgccgagc tcggtgcagg cggaaaaatc gatcgtcctc gcgttgcggc cgacgagcgc
     2341 gatcagcttg agccgcggca attgctcgag cagcgcgcgg gaaaattcca cgcgctcgcg
     2401 gatcgccacg acgacgtcgg catcgcgaag gcgctcggcg agctcctccg cgttgcgtgc
     2461 cggcgcgcgg tagcgcacga cgtcgtgccc tcggagcagc gcaaagcacg cgagtcgatc
     2521 caccatgttc tggtagtcat cgggaatgac gattttcatc gcggttttct gcccgggctc
     2581 acgcgtggtc ggagagcata ctcgctacgc tgggtattag tggaatcact gattggctag
     2641 gttcgtcgtc caatcgggat cagactcggt ctgctccctc tccctatggg agggagggca
     2701 ccgagcgcgt ggcgatgtgc attaaagaac tcgctaatcc gccaaatgct cgcgcagcag
     2761 caagccgtgg ccggcgatgg gctcgccgca cttgagcagg cgcaggccag cccacaggct
     2821 caccgcgttg ttggcgagca cgggtttgcc gagttcgcgc tcgagccgcg cgaccacgct
     2881 catggccggc cagttgccgc caggcatgat gacggcctcg gcatccggtc ggtcggcgcg
     2941 gcgcccaagc tcgtaggccg cctgcgcccc ggcacggcca agctcgacgc cggccacgta
     3001 gccggcgact tcgctgctca ccacggtaaa gccgctcgcc tccatgaagc gcaccatcgg
     3061 cacgtccatg gtcttgctcc acggcgcggc gatcgcgatg cgcgtgacgc cgagccgc
//
LOCUS       DATCWM010000127         4716 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_287251, whole genome shotgun sequence.
ACCESSION   DATCWM010000127 DATCWM010000000
VERSION     DATCWM010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4716)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4716)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4716
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_287251"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1048
                     /locus_tag="VIQ50_02295"
     CDS             <1..1048
                     /locus_tag="VIQ50_02295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359237.1"
                     /translation="PTITLTLRRRGMARALRGPAVVLSAIFSHALLGLKLASCALLAG
                     MVALAIMNYRDAEPAVTGSEPVDNETIVYRRAASPPAHLQGTDAAEQRQETGAYYPRA
                     VQTVRFVNPEQPVSIAAAARELIKRALIKVGAFVAFPSREKVEPESSEIRQKRGMVVL
                     DEIDDYLWEVYQRAPIKKDSSGDFTWKDPVAANRMGLALQDYVIGGMDPGFREQLYNA
                     GRAMDADGIHWSMLSAFRDDYRQRLAAGFKARGGNSLHGGSRRTGGYGHGRAVDVTAV
                     EGTNAEEVWKWIDVHGAKYGLARPMPGNDPAHVQQRGDSSNVASSFRQSRVRVADNGK
                     RLRRKARLKLAHAR"
     gene            complement(1094..1621)
                     /locus_tag="VIQ50_02300"
     CDS             complement(1094..1621)
                     /locus_tag="VIQ50_02300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HEY9359238.1"
                     /translation="MDEITTKQSATPEQKADRPAEWRPFEGLRREVDRLFEDFQLGTW
                     RSPFGRGAFDVQPFWRGDLWSRAPAVDIVNKESAYELSAELPGMDENNIDVKFSDGTL
                     TIKGEKRDEREEKKKNFYLAERRYGSFQRSFSVPKSVDAGRIEANFKNGVLTVTLPKT
                     PQARQNEKKIPVRQA"
     gene            1794..3419
                     /locus_tag="VIQ50_02305"
     CDS             1794..3419
                     /locus_tag="VIQ50_02305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY9359239.1"
                     /translation="MYATPVLPAARDYGALYRSFRWQIPARYNIGVDVCDRWAESDPA
                     RTAILNVRGDGKVEEVSYGVLREASNRLANALAAHGIKKGDRVALLLPQGPAVAVCHV
                     AIYKLGAIALPLAMLFGIEAIAYRLKDSGARALISNAQGLAKLAAVRDAAPALEVVWS
                     IDGPADGAEDFNAVLARAASEFTPVATTADDPALMVYTSGTTGPPKGALHAHRVLLGH
                     LPGIEIPHEFLPQPGDRFWTPADWAWAGGLLNVLLPGLHYGVPVVAQKFDKFDPEQAY
                     ALMAKMRVRNAFIPPTALRMLRSARPPKASIVLRSVGSGGEALGTETYEWGKATLGIA
                     INEFYGQTECNLVLASCAAIAVSRPGAIGKPVPGHSVAVIGADGSPCRPGELGQIAIK
                     RPDPVMFLQYWGKPDATREKSLGEWMTTGDQGVVDEDGYFQFVGRDDDVITSSGYRIG
                     PTEIEDCLIRHPAVALAAVVGKPDALRTEIVKAFIVLKSRQAPSDALAAEIRDFVKTR
                     LSAHEYPREIAFIDEMPMTTTGKLIRRLLRQRA"
     gene            complement(3467..4237)
                     /locus_tag="VIQ50_02310"
     CDS             complement(3467..4237)
                     /locus_tag="VIQ50_02310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9359240.1"
                     /translation="MAELEIDRLTLRFGGLTVLEGVSLALKARELFALIGPNGAGKTS
                     VLNCVSGIYRGEGEIRFRGRNIAGREPHEIARLGLARTFQHGELFPQMSVLDNLLTGR
                     HARIRTNPLAEMLFLASVRREEVRHRDAVERIIEFVELARYRHAPVDGLPFGIQKLVG
                     FARALALEPAILMLDEPSAGLNRDEREDLARFIMRIKHELGVSMIWIEHDLEMVADLA
                     DRIHVLDYGRTLAEGEPGAVLKDPRVVAAYIGTSARNA"
     gene            complement(4230..>4716)
                     /locus_tag="VIQ50_02315"
     CDS             complement(4230..>4716)
                     /locus_tag="VIQ50_02315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9359241.1"
                     /translation="LAAPLARAGAAMERRRHEALAYEFFPQLAGLRHRVGGLLSGGER
                     QMLALASGLVCEPELLLVDELSLGLAPVLVEDLLRRLAEIRRRLGIGVLLVEQSATVA
                     LDIADYGYVMENGRIVLDGTAERLRRHPDIQEFYLGRKSGERRSYREVKQYRRSRRWY
                     G"
BASE COUNT          812 a         1536 c         1543 g          825 t
ORIGIN      
        1 cccgacaatc acgctgacgc tgcgcaggcg cgggatggct cgtgcgttgc gcgggccggc
       61 ggtcgtattg agcgcgattt tctctcatgc cctgcttggg ctcaagctcg cctcctgtgc
      121 cctgctcgca ggcatggtgg cgttggcgat tatgaactac cgggacgccg agccggcggt
      181 caccgggtct gaacccgtcg acaacgagac catcgtctat cgccgcgcgg cgtcgcctcc
      241 cgcgcatctg caaggcaccg atgccgccga gcagaggcag gagaccggcg cgtattatcc
      301 gcgggcggtg caaaccgtcc gcttcgtcaa tcccgagcag ccagtgtcca tcgccgccgc
      361 ggcacgcgaa ttgatcaagc gcgcgctgat caaggtgggt gctttcgtcg cgtttccgtc
      421 gcgcgagaag gtggagccgg aaagctcgga aatacgccaa aaacgcggga tggtggttct
      481 cgacgagatc gacgattact tgtgggaggt ctaccagcgc gcgcccatca agaaggattc
      541 aagcggcgac ttcacctgga aggacccggt cgccgccaac cgtatgggcc tggcgctcca
      601 ggattacgtg atcggcggca tggatcccgg ctttcgcgag cagctataca atgccggacg
      661 cgccatggat gccgacggca ttcactggtc gatgctcagc gcatttcgcg acgattatcg
      721 ccaacgcctc gccgccggtt tcaaggcgcg cggcggcaac tcgttgcatg gcggtagccg
      781 ccgcactggc ggctacggtc acggccgcgc ggtcgacgtg accgctgtag aaggaaccaa
      841 tgcggaagaa gtctggaaat ggatcgacgt ccacggggcg aaatacgggc tcgcccggcc
      901 gatgcccggc aatgaccccg cgcatgttca gcagcgcggc gactcgagca acgtcgcgtc
      961 gagctttcgg cagagccgcg ttcgtgtggc cgacaacgga aagcggctgc ggcgcaaagc
     1021 caggctgaaa ctcgcgcacg cgcggtgatg accggcgaac cggcgcgttt agagactcat
     1081 cgagggaccg atctcaggcc tgtctgaccg ggatcttctt ctcgttctgg cgtgcttgcg
     1141 gcgtcttcgg caacgtgacc gtcagcacgc cgttcttgaa attcgcctcg atccgaccgg
     1201 cgtcgacgct cttcgggacg ctgaacgaac gctggaagga gccatagcgg cgctccgcca
     1261 aatagaagtt tttcttcttc tcctcccgtt cgtcgcgctt ctcgcccttg atggtcaagg
     1321 tgccgtcgga gaatttgacg tcgatattgt tctcatccat gccgggcaac tccgccgata
     1381 actcgtaggc gctctcctta ttaacgatgt cgacggccgg cgctctgctc cagaggtcgc
     1441 cgcgccagaa cggttgaacg tcgaacgcgc cgcgcccaaa cggcgagcgc caggtgccca
     1501 actggaaatc ctcgaacaga cgatcgactt cccgtcgcag gccctcgaac ggccgccact
     1561 cggcgggacg atcggccttc tgttccggag tggcggactg cttggttgta atttcatcca
     1621 tggttccctc ctacgccttg cgtgtcctgt gcacgaacaa acgcgctgga agctcgccgg
     1681 gttgcatcaa atcggccggt tccgccgggc ggaatggcgg ccgaaacatg ttcgaatttg
     1741 gtgcgcgagc cctctatgga tttcctggag ttgcatcact agcctgcgcc gccatgtacg
     1801 caacccctgt ccttccggcc gcgcgcgact acggcgcgct ctatcgctcg tttcgctggc
     1861 aaatccccgc gcgctacaac atcggggtcg acgtctgcga ccgctgggcg gagagcgatc
     1921 cggcgcgaac cgccattctc aacgtgcgcg gcgacggcaa ggtggaggag gtgagttacg
     1981 gcgtgctgcg cgaagcctcg aatcggctcg ccaatgcgct cgcggcccac gggattaaga
     2041 agggcgatcg ggtcgcgttg ctgttgccgc aagggccggc tgtcgcggtg tgccatgtcg
     2101 ccatctacaa gctcggcgcc attgcgctgc ccctggcgat gctgttcgga atcgaggcga
     2161 ttgcgtatcg gctgaaggat tccggcgcac gggcgctgat cagcaatgcg caagggctcg
     2221 ccaagctcgc tgccgttcgc gacgccgcgc ccgcgctcga agtcgtgtgg tcgatcgatg
     2281 gaccggcgga cggggccgag gacttcaacg cggttctagc gcgcgccgcc tccgaattca
     2341 cacccgtcgc caccacggcc gacgatcccg cgctgatggt ctatacctcg ggcacgaccg
     2401 gtccgccgaa aggcgcgctg catgcgcacc gcgtgctgct cgggcatctt cccggcatcg
     2461 agatcccgca cgaatttctg ccgcagccgg gcgatcggtt ctggaccccg gcagactggg
     2521 cctgggccgg cggcctgctc aacgtgttgc tgccagggtt gcactacggc gtgccggtcg
     2581 tggcgcaaaa atttgacaaa ttcgatccgg agcaggccta cgcgttgatg gcaaagatgc
     2641 gcgtgcgtaa tgcgttcatt ccgccgacgg cgctgcgcat gttgcgctcg gcgcgcccgc
     2701 caaaggcgtc cattgtgctg cgctcggtcg gctcgggcgg cgaggcgctc ggcaccgaga
     2761 cctatgaatg gggcaaggcg acgctcggca tcgccatcaa cgagttctac gggcagaccg
     2821 aatgcaatct ggtgctggcc tcctgcgcgg ccatcgccgt ttcgcgtccc ggcgccatcg
     2881 gcaaaccggt gcccgggcac agcgtcgcgg tgattggtgc ggacggctcg ccttgccggc
     2941 ccggcgagct tggccagatc gcgatcaaac ggccggaccc ggtgatgttc ctgcagtatt
     3001 ggggcaagcc cgatgcaacg cgcgaaaaat ctctcggcga atggatgacg acgggcgatc
     3061 agggcgtcgt cgacgaggac ggctatttcc agttcgtcgg gcgcgacgac gatgtcatca
     3121 cttcgtcggg ataccgcatc ggcccgaccg agatcgagga ttgcctcatt cgccatccgg
     3181 cggtggcgct agcggcggtg gtgggcaagc ccgatgcgct gcgcacggag atcgtgaagg
     3241 ccttcatcgt actcaaatcg cgccaggcac cctccgacgc gctcgccgcc gagatccgtg
     3301 acttcgtgaa gacgcgcctc tccgcgcacg aatatccgcg cgagatcgcc tttatcgacg
     3361 agatgccgat gaccaccacc ggcaagctaa tccgcagatt gctgcggcag cgggcgtgaa
     3421 cggccaagag cggcgcgggc ttgcgcgatg cgggtaaggc gcgcggtcag gcgttgcgtg
     3481 cgcttgtccc gatataggcc gcaacgacgc gcggatcctt cagcaccgcg ccgggctcgc
     3541 cttcggctag cgtccgtccg taatcgagca cgtggatgcg atcggccaga tcggccacca
     3601 tttcgaggtc atgctcgatc cagatcatgc tgacaccgag ctcgtgtttg attcgcatga
     3661 tgaagcgcgc caagtcctcg cgctcgtcgc gattgagccc ggccgatggc tcgtcgagca
     3721 tcaggatggc cggctcgagg gcgagcgcgc gcgcaaaccc gaccagcttc tggatgccga
     3781 agggcaggcc gtccacgggc gcatggcgat agcgcgcgag ctcgacgaac tcgatgatgc
     3841 gctcgactgc atcgcggtgg cgcacttcct cgcgccgcac cgatgctaga aacagcatct
     3901 cggcaagagg attggtgcga atgcgcgcat gacggccggt caggagattg tccagcaccg
     3961 acatctgcgg aaacagttcg ccatgttgaa aggtgcgcgc aagtccgagg cgggcgatct
     4021 cgtgcggctc gcgcccggcg atgttgcggc cgcgaaaccg gatctccccc tcgccgcggt
     4081 agatgccgct cacgcaattg agcacgctgg tcttgccggc gccgttggga ccgatcagcg
     4141 caaacagctc gcgcgctttc agcgcgagcg agacgccctc gagcaccgtc aggccgccga
     4201 accgcagcgt caggcgatcg atctccagct cagccatacc atctccggct gcggcgatat
     4261 tgcttgacct cgcgatagct tcttcgctcg ccgctcttgc ggcccagata gaattcctgg
     4321 atgtccgggt ggcggcgcag gcgctcggcc gtgccgtcga gcacgatgcg tccattttcc
     4381 atcacgtaac cgtaatcggc gatgtcgagc gccaccgttg cgctctgctc cacgagcaga
     4441 acgccgatgc cgagccggcg gcggatttcg gccagccgcc gcagcaaatc ctccaccagc
     4501 acgggcgcga ggccgagcga aagctcgtcg accagcagga gttcgggctc gcagacgagg
     4561 ccgctggcga gcgccagcat ttgccgttcg ccgccggaaa gaaggccgcc gacgcgatgg
     4621 cgcaagccgg cgagttgcgg gaagaactca taggcgaggg cctcgtgccg ccggcgttcc
     4681 attgccgccc ccgcgcgcgc aagcggcgcg gcgaga
//
LOCUS       DATCWM010000128         5746 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_389658, whole genome shotgun sequence.
ACCESSION   DATCWM010000128 DATCWM010000000
VERSION     DATCWM010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5746
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_389658"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..190)
                     /locus_tag="VIQ50_02320"
     CDS             complement(<1..190)
                     /locus_tag="VIQ50_02320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreD"
                     /protein_id="HEY9359242.1"
                     /translation="MRQTAADLARTFAANRAVGGITLAVRAGNGLTRRARVREDGSLR
                     VRCPGPPSAELEAVIVNTA"
     gene            complement(212..907)
                     /gene="urtE"
                     /locus_tag="VIQ50_02325"
     CDS             complement(212..907)
                     /gene="urtE"
                     /locus_tag="VIQ50_02325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014498215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter ATP-binding subunit UrtE"
                     /protein_id="HEY9359243.1"
                     /translation="MLQVDSIDLHYGAAQALRNVSLSAEAGKVTCVLGRNGVGKTSLL
                     DALAGQHAISKGAITFDGEDITRLKPSERARRGIAYVPQGREIFPLLTVEENLKTGFA
                     PLKREDRSIPDDVFALFPVLNDMLGRRGGDLSGGQQQQLAIGRALVMRPRLLLLDEPT
                     EGIQPSIIKDIGRAIAYLRNLGRIAVVLVEQYLDFARELGDHFAVMDRGAIVYSCSRD
                     TMDEAALRRAMAI"
     gene            complement(915..1667)
                     /gene="urtD"
                     /locus_tag="VIQ50_02330"
     CDS             complement(915..1667)
                     /gene="urtD"
                     /locus_tag="VIQ50_02330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter ATP-binding protein UrtD"
                     /protein_id="HEY9359244.1"
                     /translation="MDARTTTALLYLDGVTVSFDGFRALNNLSLTVEPGEMRAIIGPN
                     GAGKTTMMDVITGKTRPDTGDVYFDGAYDLSRLDETEIALLGIGRKFQKPTVFDMHTV
                     EDNIGLALKGDRRARKTLFWRESDEEATRIERILEVIRLSPVRQRVAGSLAHGQKQWL
                     EIGMLLAQEPKLLLVDEPVAGMTDAETRQTAELLKEINRDRTVVVVEHDMAFVRELGV
                     KVTCLHEGSVLAEGTIDQVSQNERVVEVYLGR"
     gene            complement(1671..2819)
                     /gene="urtC"
                     /locus_tag="VIQ50_02335"
     CDS             complement(1671..2819)
                     /gene="urtC"
                     /locus_tag="VIQ50_02335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter permease subunit UrtC"
                     /protein_id="HEY9359245.1"
                     /translation="MTGNLVLRSLDRGALAFLATLAAIGILVPLLNLVVPASSPFYLS
                     SYFVALFGKYLCFGLLALSIDLIWGYCSILSLGHGAFFALGGYAMGMYLMRQIGTRGV
                     YAHPVLPDFMVFLNWPELPVYWYGFQHFAYAAFMVLFVPGLLAFVFGWFAFRSRVTGV
                     YLSIITQALTFALMLGFFRNNLGFGGNNGLTDFKDILGFNVQAPTTRAALFVSSTLAL
                     MLGFIICRVVVSSKFGKVLVAIRDAEARARFLGYRVEAYKLFVFTLSACMAGVAGALY
                     VPQVGIINPSEFSPGNSIEAVIWVAVGGRGTLTGAVLGAVLVNYGKTYFTSGVLAPYW
                     LFLLGGLFVAVTLLLPRGIVGTIHHHWREWRGRRLAAGVQYAAPRPAE"
     gene            complement(2816..4429)
                     /gene="urtB"
                     /locus_tag="VIQ50_02340"
     CDS             complement(2816..4429)
                     /gene="urtB"
                     /locus_tag="VIQ50_02340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018454671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter permease subunit UrtB"
                     /protein_id="HEY9359246.1"
                     /translation="MRAFSDRFVALVCALGVLAVLMTGARAGPYEDGLLRFTADSFDD
                     TIEGIYAVATSGNALAPQVIGALQEGRLLFSAGEKRVFIRETPDRLIDAATGRPVAGG
                     EPSDLVPVRLNNRLRRIIEAALGGLTLMAPDPGKRFEAAQAVLKSKDANALPALDQAI
                     PRETDAQVKQALTEARAAVVLYLDAASDADKIEAVAVIRQRGDQDALALLGGLPASAS
                     PAVKKAAADAIASIENSLALWTALQNAWYGLSLGSVLLLAAIGLAITFGVMGVINMAH
                     GEMVMLGAYTTFVVQQVIRAYEPTLFDYSLAVAIPLAFVVAGLVGILIEQGIIRFLYG
                     RPLETLLATWGLSLILQQAVRTVFGPTNKDVGNPSWMSGAFEVGHITITYNRLWIIVF
                     TLLIFMGLLALLRFTRFGLEMRAVTQNRAMAASMGIRTSRIDALTFGLGSGIAGLAGV
                     ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGAFTLGIANKFLEPYAGAVLA
                     KIAILVLIILFIQKRPRGLFALKGRAVEA"
     gene            complement(4592..>5746)
                     /gene="urtA"
                     /locus_tag="VIQ50_02345"
     CDS             complement(4592..>5746)
                     /gene="urtA"
                     /locus_tag="VIQ50_02345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0033219 - urea binding [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter substrate-binding protein"
                     /protein_id="HEY9359247.1"
                     /translation="ETVLKDTALMTFEEINAKGGVLGKKIEPVVVDPASNWPLFAEKA
                     RELISKEKVAAVFGCWTSVSRKSVLPVFKELNSILFYPVQYEGEESERNVFYTGAAPN
                     QQAIPAVDYLMSKDGGEAKRWVLAGTDYVYPRTTNKILEAYLKQKGVADSDIMINYTP
                     FGHSDWQTIVSDIKKFGSAGKKTAVVSTINGDANVPFYKELGNQGIKATDIPSVAFSV
                     GEEELAGIDTKPLLGHLAAWNYFQSIKTPINEKFIADWKAFIKNPKRVTNDPMEAHVI
                     GFAMWVKAVEKANSTDPDKVIDALPGIEAPNLTGGTSKMLPNHHITKPVYIGEVRGDG
                     QFDVVWKTPTLVPGDAWSKYLPGSKDLEADWVTLKCGNYNTVTKKCGGAS"
BASE COUNT         1092 a         1855 c         1806 g          993 t
ORIGIN      
        1 ccgcggtatt gacgataacc gcctcaagct cggccgaagg cggtccggga caacgtacgc
       61 gcagcgagcc gtcctcacgc acacgcgcgc ggcgcgtcag cccgttgccc gcgcgtaccg
      121 ccagtgtgat ccctcccacg gcgcggttcg ccgcgaatgt gcgcgcgaga tcagctgcgg
      181 tttgtcgcac ggttggcctt cgtcatcgtc ctcaaatggc catcgcccgt ctcagcgccg
      241 cctcgtccat tgtgtcacgg ctgcaggaat agacgatcgc gccgcggtcc atgaccgcga
      301 aatggtcgcc caactcgcgc gcgaagtcga ggtattgctc cacgagaacc accgcgatcc
      361 gcccgagatt gcgcagatag gcgatggcgc ggccgatatc cttgatgatc gagggttgaa
      421 tgccctcggt cggctcgtcc agcaacagta gccgcggccg catgacgagg gcgcggccga
      481 tggcgagctg ctgctgctgc ccgccggaga gatcgccgcc gcgccggcca agcatgtcgt
      541 tgagcaccgg aaacaacgcg aacacgtcgt cggggatcga gcgatcctca cgcttgagcg
      601 gggcaaagcc agtcttgaga ttctcctcga cggtgagaag tgggaagatc tcgcgcccct
      661 gcggcacata ggcaatgccg cgccgcgcgc gctcgctggg cttgaggcgg gtgatgtctt
      721 ctccgtcgaa cgtgatggcg cctttgctga tcgcatgctg tccggcgagc gcgtcaagaa
      781 ggctcgtctt gccgacgccg ttgcgtccca atacgcaggt caccttgccc gcctcggccg
      841 agagcgacac gttgcgcaag gcctgcgccg cgccgtagtg cagatcgatg gagtcgactt
      901 gcagcatccc agcgctaccg ccccagatag acctcaacca cacgctcgtt ttgcgagacc
      961 tggtcgatgg tgccttccgc cagcaccgag ccttcatgca ggcaagtgac cttgacaccg
     1021 agctcgcgca cgaatgccat gtcgtgctcg accacgacca cggttcggtc gcgattgatc
     1081 tctttgagga gctccgcggt ctggcgcgtc tccgcgtcgg tcatgccggc aaccggctcg
     1141 tcgaccagga gcagcttggg ctcttgtgcg agcagcatgc cgatctcgag ccactgtttc
     1201 tgcccgtgcg caagcgaacc ggcgacgcgc tggcgcaccg gtgagagccg gatgacctct
     1261 aggatgcgct cgatccgggt cgcctcttcg tcgctctcgc gccagaacag tgtcttgcgc
     1321 gcccgccggt cgcccttaag cgcaaggccg atattgtcct ccacggtatg catatcgaac
     1381 accgtcggct tctggaattt gcggccgatg ccgagcagcg caatctcggt ctcgtcgagg
     1441 cgcgacagat cgtaggcgcc gtcgaaatag acgtccccgg tatcgggcct ggtcttgccg
     1501 gtgatgacgt ccatcatggt ggtcttgccg gcgccgtttg gaccgatgat ggcgcgcatc
     1561 tcgcctggtt cgaccgtcaa ggagagattg ttgagcgcgc ggaaaccgtc gaacgacacg
     1621 gtcacgccgt ccaaatagag aagcgccgtg gtggtgcgcg catccatggc tcactccgcc
     1681 ggccggggag ccgcatactg cacgcctgcg gcaaggcgcc ggcctcgcca ttcgcgccaa
     1741 tgatgatgga tcgtgccgac gatgccgcgc ggcaagagca gcgtgacggc gacgaacagg
     1801 ccaccgagca ggaacagcca atagggcgcg agcacgccgc tggtgaaata ggtcttgccg
     1861 taattgacga gcacggcgcc gagcaccgcc cccgtcagcg tgccgcgacc gccgacggcg
     1921 acccagatca ccgcctcgat ggaattgccg ggcgaaaact cgctcgggtt gatgatgccg
     1981 acctgcggca cgtagagcgc gccggcaaca cccgccatgc acgcggacag tgtgaaaacg
     2041 aagagcttat acgcctctac ccggtagccg agaaaacgtg cgcgcgcttc ggcgtcgcgg
     2101 atggcgacca gcaccttgcc gaacttcgag ctcacgacga cgcggcagat gatgaatccg
     2161 agcatcagcg ccagcgtgga actcacgaac agcgccgccc gcgtcgttgg cgcctgcacg
     2221 ttgaatccga ggatgtcctt gaagtccgtg agtccgttgt tgcccccgaa gcccagattg
     2281 ttgcggaaga agccaagcat cagcgcgaag gtcagcgcct gggtgatgat cgagagatag
     2341 accccggtca cgcggctcct gaacgcgaac caaccgaaca cgaacgcgag caagcccggc
     2401 acgaacagaa ccatgaatgc ggcgtaggcg aaatgctgaa agccgtacca gtagaccggc
     2461 agttccggcc agttcaggaa caccatgaag tcgggcagaa ccggatgggc gtaaactccg
     2521 cgcgttccga tctgccgcat cagatacatg cccatggcgt agccgccgag cgcgaagaac
     2581 gcgccgtggc cgagcgaaag aatgctgcaa tagccccaga tcaggtcgat cgacagcgcc
     2641 aacagcccga agcagaggta cttgccgaac agcgccacaa aatatgacga cagataaaac
     2701 ggagaactcg ccggcaccac gaggttgagc agcggaacga gaataccgat tgccgccaag
     2761 gtggccaaaa aggcgagcgc gccgcggtcg agcgatcgca ggacgaggtt cccggtcatg
     2821 cctcgacggc ccggcccttc aaggcaaaga gcccccgcgg gcgcttctgg ataaagagga
     2881 tgatcagcac caggatcgcg atcttggcga gcacggcgcc ggcatatggc tcgaggaact
     2941 tgttggcgat accgagcgtg aatgccccga ccagcgtccc ccacagattg cccacgccgc
     3001 cgaacaccac caccatgaac gaatcaatga tgtagctctg gccgagattg gggctgacat
     3061 tgtcgatttg cgacaacgcg acgccggcga gcccggcgat tcccgagccg agcccgaaag
     3121 tgagcgcgtc gatgcggctc gtgcgaatcc ccatcgatgc tgccatcgca cgattctgcg
     3181 tcaccgcgcg catctccagg ccgaagcgcg tgaagcgcaa cagcgcgagt aaccccatga
     3241 agatgagcag ggtgaagacg atgatccaaa gccgattgta ggtaatggtg atgtgtccga
     3301 cctcgaacgc gccgctcatc caggacgggt tgccgacgtc cttgttggtt gggccgaaga
     3361 cggtgcgcac ggcctgctgc aggatcagcg agagtcccca ggtggcgagc agcgtctcca
     3421 gcggccgccc gtagagaaag cggatgatgc cctgctcgat caggatgccg accaatccgg
     3481 cgaccacgaa cgcgagcgga atggcaaccg caagcgagta atcgaacagt gtgggctcat
     3541 aggcacggat cacctgctga acgacgaacg tcgtgtaggc gccgagcatg accatttcgc
     3601 catgcgccat attgatcaca cccatcacgc cgaaggtgat ggcaagcccg atcgccgcca
     3661 acagcagcac cgagccgagc gagagtccgt accaggcgtt ctgcagcgcg gtccaaagcg
     3721 caaggctgtt ttcgatcgag gcgatggcgt cggctgcggc tttcttgacc gcgggggagg
     3781 cgctcgccgg caatccgccg agcagcgcaa gcgcgtcctg atcgccccgc tggcggatca
     3841 ctgcaacggc ctcgattttg tcggcgtcgg atgccgcatc gagatagagc acgaccgccg
     3901 cccgcgcctc ggtcagggcc tgtttcactt gcgcgtcggt ttcgcgcggg atcgcttggt
     3961 cgagcgctgg gagcgcattt gcgtccttgg atttgagcac cgcctgcgcc gcctcgaacc
     4021 gttttcctgg atcgggagcc atcaatgtca gccctccgag cgccgcttcg atgatccgcc
     4081 gcagccgatt gttgaggcgc accgggacga ggtcggacgg ctcgccgccg gcaaccggcc
     4141 ggcccgtcgc cgcgtcgatc agccggtccg gcgtctcacg gatgaagacc cgcttctcgc
     4201 ccgcgctgaa gaggagtcgc ccctcttgca acgcgccgat tacctgcggc gcaagcgcgt
     4261 tgccgctcgt ggcgacggca tagattcctt cgatggtgtc gtcgaagctg tcggcggtga
     4321 agcggagaag tccgtcctcg tatggcccgg cgcgcgcccc cgtcatcaga acggcgagca
     4381 ccccaagcgc acagacgagc gcgacgaagc gatcgctgaa ggcacgcatc cgatcgtccc
     4441 ggcattgcaa gcggggtggc ccgaattgcg cggccacgcc cgactccagt ttcgctgcga
     4501 acaccacgct cacgcttccg ggtgccgcag actcggtctg ctccctctcc cacctcagga
     4561 agggggagcg gaccgagtta cgagcgcaac gctacgacgc gccgccgcac ttcttggtca
     4621 ccgtattgta gttgccgcat ttcagcgtca cccagtcggc ttccaagtcc ttcgagcccg
     4681 gcaagtactt ggaccaggcg tcgccgggga ccaatgttgg cgtcttccag acgacgtcga
     4741 attggccgtc gccgcggacc tcgccgatat agaccggctt ggtgatgtgg tgattgggca
     4801 gcatcttgga ggtaccgccg gtaaggttgg gagcttcgat gccgggcagc gcgtcgatca
     4861 ccttatccgg atcggtcgag ttcgctttct cgactgcctt cacccacatc gcgaagccga
     4921 taacgtgcgc ttccatcgga tcattggtga cgcgcttcgg atttttgata aaggccttcc
     4981 agtcggcgat gaacttttcg ttgatcggcg tcttgatcga ctggaagtag ttccacgcgg
     5041 cgagatgccc gagcagcggc ttggtgtcga tgccggcgag ctcctcctcg ccgaccgaga
     5101 aggcgacgct cggaatgtcg gttgccttga tgccttggtt gccgagctcc ttgtagaacg
     5161 gaacgttggc atcgccgttg atggtggaga caaccgccgt cttcttgccg gccgagccga
     5221 acttcttgat atcggagacg atggtctgcc agtcggagtg cccgaacggc gtgtagttga
     5281 tcatgatgtc ggaatccgcc acgcccttct gcttgagata ggcctcgagg atcttgttcg
     5341 tggtgcgcgg atagacataa tccgtgccgg cgagcaccca acgcttggcc tccccgccgt
     5401 ccttcgacat gaggtagtcg accgcgggga tcgcctgctg gttgggagcc gcgccagtat
     5461 agaacacgtt gcgctcgctc tcctcgccct cgtactggac gggatagaac aggatgctgt
     5521 tcagctcctt gaacaccggc agcaccgact tgcgcgacac cgaggtccag caaccgaaca
     5581 cggcggcgac cttctccttg gagatcagct cgcgcgcctt ctcggcaaac agcggccagt
     5641 tggaggcggg atccaccacc accggctcga tcttcttccc cagcacccct cccttggcgt
     5701 tgatctcctc gaaggtcatg agcgccgtgt ccttcagcac cgtctc
//
LOCUS       DATCWM010000129         2398 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_422131, whole genome shotgun sequence.
ACCESSION   DATCWM010000129 DATCWM010000000
VERSION     DATCWM010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2398
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_422131"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(750..824)
                     /locus_tag="VIQ50_02350"
     tRNA            complement(750..824)
                     /locus_tag="VIQ50_02350"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(790..792),aa:Val,seq:gac)
     gene            complement(881..1240)
                     /locus_tag="VIQ50_02355"
     CDS             complement(881..1240)
                     /locus_tag="VIQ50_02355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY9359248.1"
                     /translation="MAKIILAEDDSDMRRFLVKALQSAGYDVISFDNGLSAYQRLREE
                     PFELLLTDIVMPEMDGIELARRASELDPDIKIMFITGFAAVALNPDTAAPKAAKVLSK
                     PVHLRELVNEVQKMLAA"
     gene            1478..2365
                     /locus_tag="VIQ50_02360"
     CDS             1478..2365
                     /locus_tag="VIQ50_02360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008960759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-formylglutamate amidohydrolase"
                     /protein_id="HEY9359249.1"
                     /translation="MSEVKDELDPPFEILEPAEWRGPVVFNSPHSGSIYPRAFLTASR
                     LEIASLRRSEDSFVDELSLGVVRRGYPLMRAHFPRCYVDVNREPYELDPRMFEGRLPS
                     FANTRSMRVAGGLGTVARVVGDAQEIYRQRIPVDDAIRRIEGLYKPYHRALRRLFTRV
                     HRDFGAAILIDCHSMPSSAGAKDERPRADVVLGDRYGTSCVAAVAETIEATLRAQGYS
                     VSRNKPYAGGFITEHYGNPAAGLHAIQLELNRALYMDERRFERSPSFARLAHDLETLS
                     DALAAIPLQELRPYRAAAE"
BASE COUNT          430 a          802 c          743 g          423 t
ORIGIN      
        1 tcatatggag gggcgccgac gcctcggcat caaagacggc acattgctga ccgagctcgg
       61 gcatcttcgc actgtactcc gttgggctga aaagcacggc ttaatcctgc gggcgcccta
      121 tatcgaacgg ccgtcggcac cgaagccgca gggacgccac ctcatccgcg agcaggtacg
      181 cgcgctcatt caggcttgcg atcttccgca cctgaaactg ttcgtgcatc tcgcctacgc
      241 gaccgccggt cgctcgagcg cgctgttagg gctgacttgg aatcgctgcg acttcgaacg
      301 cggcaaaatc aatctcgagg atccgaccat caaccatccg cacaagggcc gcgcgatcgt
      361 gccgatgaca gacggcctgc gcatcactct taccgaggcg cgccgcgcct tgactgactt
      421 cgtgatcgag tgggccggca agcgcgtggc gtctgtcaag cgcgggatca aggccgccgg
      481 cctgcgcgct gggatcggca aggtcacgcc gcacatgctg cggcactcgg cggcggtgcg
      541 cttggccgaa gatggcgtgc cgatggagga gatcgcgcaa tatctcggtc acggcaacgt
      601 caacgtgacg cggcgcatct atgcgcggtt ctcgccggac tatctgcgca atgccgcgcg
      661 agcgctcgaa ttggacgatc ttggtccgct tcgaccaaaa gagcactacg tgcgcaagag
      721 cagaagtgcc gattctatcg atggtgtcgt ggtgggcgcg acagggatcg aacctgtgac
      781 ccctaccatg tcaaggtagt gctcttccgc tgagctacgc gcccgagccg gcgtccgtct
      841 tatcggctcg cttgcgacga ggcaaggagc ccccgccgcc tcaggcggcg agcatcttct
      901 gcacctcgtt gacgagctcg cgcagatgca ccggcttgga caggaccttg gcggccttcg
      961 gcgccgccgt atcgggattg agcgcgaccg cggcaaagcc ggtgatgaac atgatcttga
     1021 tgtcgggatc gagctcgctg gcgcggcgcg ccaattcgat cccatccatc tccggcatca
     1081 cgatgtcggt cagcagaagc tcgaacggct cctcgcgcag ccgctgatac gccgagagcc
     1141 cattgtcgaa cgagatcacg tcgtaaccag cactctgcag cgccttcacc aggaagcgcc
     1201 gcatatcgct atcgtcctcg gcaagaatga tcttggccat ggtcctgccc cgctcaggat
     1261 ggtgagctaa cgcctgccct tattgttccc cgcctccata gagggggatg gcgggtaaac
     1321 aacgagtgaa accctcccgg agatcgcagg caaggttgat ccaaacctaa ggccgacccc
     1381 tcctgcgctt ttggcccatg gacaatagcc ggtttccggc catagtggtg ccaaaagcgg
     1441 gggtgctctt gaggtcacgt gaaagccgcc ctttgtcatg tccgaagtga aagacgaact
     1501 cgatcctccc tttgagatcc tagagcccgc cgagtggcgc gggccggtcg tattcaattc
     1561 gccgcacagt gggagcatct atccgcgcgc gttcctgacc gcctcgcgac tcgagatcgc
     1621 gtcgctgcgg cgctccgagg acagcttcgt cgacgagctc agcttgggcg tcgtgcggcg
     1681 cggatacccg ctgatgcgcg cgcactttcc ccgctgctac gtcgacgtca accgcgagcc
     1741 ctacgagctc gacccgcgca tgttcgaagg ccgacttccc tcgttcgcca atacccgttc
     1801 gatgcgcgtg gcgggaggat tggggacggt ggcccgcgtc gtcggcgacg cccaggaaat
     1861 ctaccgtcaa cgcatcccgg tcgacgacgc gatcaggcgc atcgaaggac tctacaagcc
     1921 ttaccaccgg gcgctgcgcc ggctgttcac gcgggtgcac cgggatttcg gcgccgcgat
     1981 cctgatcgat tgccactcca tgccctcgag cgccggcgcc aaggacgagc gtccgcgcgc
     2041 cgacgtggtg ctgggcgacc gctatggcac gagctgcgtc gcggcggtcg ccgagacgat
     2101 cgaggccaca ctgcgcgcgc aaggctattc ggtaagccgc aacaagcctt atgcgggggg
     2161 cttcatcacc gagcactacg gcaatccggc cgccggcctg cacgccatcc agctggagct
     2221 caaccgcgcg ctttatatgg acgagcgccg cttcgagcgc tcgccctcct tcgcccggtt
     2281 ggcgcacgac ctcgagacgc tctccgatgc gctcgccgcc atcccgctcc aggagctgcg
     2341 gccctaccgc gctgcggccg aataacggct ccttcacgat gctcggaaaa aagggccg
//
LOCUS       DATCWM010000130         8447 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_233175, whole genome shotgun sequence.
ACCESSION   DATCWM010000130 DATCWM010000000
VERSION     DATCWM010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8447)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8447)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8447
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_233175"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1897
                     /locus_tag="VIQ50_02365"
     CDS             <1..1897
                     /locus_tag="VIQ50_02365"
                     /inference="COORDINATES: protein motif:HMM:NF037959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HEY9359250.1"
                     /translation="ALWLVGLLAVSIGLPFFAIAANSPLLQAWFARTDHPAAQDPYFL
                     YAASNVGSFLALVAYPTVIEPFVRLDDQARAWSIGFCLLVVLLAACGVMLWRSPDATA
                     RAEATIDAPPTWKDAAFWAALAAVPAGLLVAVTAHISTDVAAVPLLWTLPLALYLLTF
                     VVAFARRPIIPHRLVVAVQAPCIIALVAVMIFDPIKNIIGVLAVHLTVFFVNALMCHG
                     ELARTRPPAKYLTAFYLWISAGGVIGGVATGLIAPRVFNWVAEYPILIALAALCRPGL
                     ALPRDRTQRYLLFGGIAAAAVVLVVWALDPIVVDETTFAWAVTALLVSAMLLWRVPLA
                     FAAVIAFTLLVNHRIIEQDGAISLRSFFGVSRVFDTADGQFRLLQHGTTLHGGQRLRQ
                     PTGEPAAIDPPEPMLYYWDGSAISQALEAVRARLDGPMRFAVIGLGAGALACSAGPQD
                     TVRYYEIDPAIVGMARAPHLFSFLHICRPDVPIILGDARLTLAEAPDGAYDLIIVDAF
                     SSDAIPIHLLTREAMAIYFKKLSAHGMVVMHVSNRHLELVSVVAGIAAANGLMTLVSE
                     GADIDEAANPYKFSATVAAVARSEEDFGPLAHSADWKLESPDPQQWVWSDDYSNIVGA
                     VIRKLRE"
     gene            complement(1973..2509)
                     /locus_tag="VIQ50_02370"
     CDS             complement(1973..2509)
                     /locus_tag="VIQ50_02370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEY9359251.1"
                     /translation="MFESLETHAQHVVEFVRDHEAWAAPIVFALAFGESLAFISLLIP
                     AWAALVGIGVLISHGNLNFWPIWVAGSVGAALGDWLSYWIGVKLGPPVAHIWPLSRHP
                     ELLPRGETFVKRWGPLAIFIGRFFGPLRASVPLVAGIFRMPVWEFQIANFSSAFVWAA
                     VLLTLGDVVSKLISWVWH"
     gene            2823..4904
                     /gene="parE"
                     /locus_tag="VIQ50_02375"
     CDS             2823..4904
                     /gene="parE"
                     /locus_tag="VIQ50_02375"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009340 - DNA topoisomerase IV complex
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HEY9359252.1"
                     /translation="MPKTAKAAPKSAPQNPSKDLFSDLPEMTARRLSGKAARAGRSAG
                     GAEARYTARDIEVLEGLEPVRRRPGMYIGGTDEKALHHLFAEVIDNSMDEALAGDASF
                     IEVEMEADGFVSVTDNGRGIPVDPHPKFKNKSALEVVMCTLHAGGKFDSKVYETSGGL
                     HGVGVSVANALSERMEVEVAREQTLHRMVFERGKPKGKLQKLGRVSNRRGTKVRFRPD
                     PEIFGAKAHFKPERVFKMARSKAYLFGGVEIRWSCAKELLRGVEGVPEKDTFHFADGL
                     KDYLSTAIDGAALVHPDIFTGSAGKIGVHGAAQWAVAWTADSDGSLSSYCNTIPTPDG
                     GTHESGLRSALLKGIKDHAERVGQGKRAAPVTGDDVMNGAACMISVFIREPEFQGQTK
                     DRLATAEATRIVENAIRDPFDHWLAGNPTQANKLLDFVVERAEERMRRRQEKENLRKS
                     AVRKLRLPGKLADCTNTATQGSEIFIVEGDSAGGSAKQARDRASQAVLPLRGKILNVA
                     SAGKDKLAQNQQLGELMQALGCGTGAHYREEDLRYDKVIVMTDADVDGAHIASLLITF
                     FYRQTPRLIDNGHLYLAVPPLYRLSHGGKNFYARDDKHKDELLKKEFHANAKVEIGRF
                     KGLGEMMAMQLKETTMDPKKRTLLRVVVVDDERKTTDSSVERLMGNNPEARFEFIQER
                     AEFAGDELLDV"
     gene            complement(5211..5360)
                     /locus_tag="VIQ50_02380"
     CDS             complement(5211..5360)
                     /locus_tag="VIQ50_02380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359253.1"
                     /translation="MSCIWPQASLMIFLLLYFVFLWVAWLLAVKLTEPRPGRQAARSG
                     ACDIA"
     gene            complement(5433..6425)
                     /locus_tag="VIQ50_02385"
     CDS             complement(5433..6425)
                     /locus_tag="VIQ50_02385"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9359254.1"
                     /translation="MVHFKRTMLTAGLVGLAAIVAGAAGAQGDSAASFPTRPIHLIVG
                     FAAGGGNDLFARLVGQKLSENIGQPVIVENKAGAGGRIAVEYVKSQPADGYTIMVAAS
                     GQMAVAAAIYPKLSYHPTRDFLPLTMIASFPLILAGPANDAINSVKDLVAYGKANPDK
                     SNYATSSPAFTITTELFKLKTGMPAVAVPYKSSNEMMLSVAGGNTLFSIADGPPTMPL
                     VQGGKVRALAVTGSERSFELPNVPSMAEAGYPEVNIGLWSGVFVAAGAPPAIANKLET
                     ELRRALADPGVREKLKAMAVNPGGGPGEEFRKKIDADIRVFADVVKAANLKFEE"
     gene            6656..8059
                     /locus_tag="VIQ50_02390"
     CDS             6656..8059
                     /locus_tag="VIQ50_02390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011512126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HEY9359255.1"
                     /translation="MVYSTAEQRHRSRRGARDLFGHPRGLTFLFATEMWERFSYYGMR
                     ALLVLYMVKLLLLPGHADNVIGLTTLRSFFESMTGPLGVQPFSSHIYGLYTGLVYLTP
                     VFGGMLADRVLGQHRTIVLGAAMMAIGHFMMAFEPLFLLALTMLILGNGAFKPNMSAQ
                     VGGLYARGDPRRDRAYSIFYVGINVGAFLAPLVCGTLGEQLGWHYGFTAAGIGMTIAL
                     AIYLYAMPELPPDELHKAMAAGIANKPLDRSERRGILALIALFVPTTLFWATYEQQGN
                     TIALWADDHTDRAINLILWHGEIPVTWFQAFNPFMIFAFTPLVVALWAWQAKRGKEPS
                     TVTKMSIGCFGVTLANLIMVAAAWQAAGDEASWLWLLGYFVVITIGELYLSPIGLSLV
                     SKVAPARMVSMLMGLWLATSFAGNLIAGWLGSFWSGMDKTMFFLVIAGIAFVAGAVIL
                     AFDRPLKRAIRDQASAS"
     gene            8056..>8447
                     /locus_tag="VIQ50_02395"
     CDS             8056..>8447
                     /locus_tag="VIQ50_02395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HEY9359256.1"
                     /translation="MNSTRPAPRAFGHVETWVFDLDNTLYPHHLNLWQQVDERIREYI
                     AGYLKVPHEEAFRLQKDYYKRYGTSMRGLMTEHGMEPDDFLDFVHQIDHSPLTPNAAL
                     AAAIEVLPGRKLILTNGTRRHADAVLARL"
BASE COUNT         1521 a         2734 c         2600 g         1592 t
ORIGIN      
        1 agcgctctgg ctggtcgggc tattggcagt ctcgatcggc ctgccgttct ttgcgatcgc
       61 cgccaacagt ccgttgttgc aggcctggtt cgcacgcacc gatcaccccg ccgcgcaaga
      121 tccgtatttc ctctatgctg ccagcaacgt cggcagcttt ctcgcgctcg tcgcctaccc
      181 gaccgtcatc gagccgttcg tgcggctcga tgatcaagca cgcgcgtggt cgatcggttt
      241 ttgcctgctc gtcgtgctgc tcgccgcctg cggcgtcatg ttgtggcgat ccccggacgc
      301 aactgctcgc gccgaagcca cgatagatgc gccaccgacc tggaaggacg ccgctttctg
      361 ggccgcgctc gcggcggtgc ccgcgggcct tctcgtcgcc gtgaccgcgc atatctcgac
      421 cgatgtggcg gcggtgccgc tgctgtggac gcttccgctc gcgctctatc tgctgacctt
      481 cgtcgtcgcg tttgcgcgcc gcccgatcat tccccaccgg ctcgtggtgg ccgtgcaagc
      541 gccgtgtatc attgcactcg ttgccgtgat gatcttcgac ccgatcaaga acatcattgg
      601 cgtcctcgcc gtgcatctca cggtgttctt cgtcaatgcc ttgatgtgcc acggcgagct
      661 tgcgcgcacg cgcccgccag ccaaatacct caccgcgttc tatctttgga tatcggcagg
      721 cggcgtgatc ggcggcgtcg cgacgggttt gatcgcgccg cgtgtgttca actgggtggc
      781 tgaatatccg attctgatcg cgcttgcggc gttgtgtcgc cccggcctcg cgctaccccg
      841 cgaccgaacc cagcgctatc tgctcttcgg cgggatcgcg gccgcggcgg tcgtgctcgt
      901 cgtctgggcg ctcgacccaa tcgtggttga cgagaccacc ttcgcttggg ctgtcactgc
      961 gctgttggtt tcagccatgc tgctgtggcg cgtcccgctg gcattcgccg cagtgattgc
     1021 gttcacgctc ctcgtcaacc accgtatcat cgagcaagac ggcgccatat cgctgcgcag
     1081 ctttttcgga gtcagcagag tctttgacac tgcggacggg caatttcggc tgctgcagca
     1141 cggtaccacg ctgcacggcg gtcagcgcct acgccaaccc actggcgaac cggcagccat
     1201 cgatccgccg gagccgatgc tttactactg ggacggctcc gccatttcac aggcgctcga
     1261 ggcggtgcgg gcgcggcttg atggtccgat gcgttttgcc gtcattggtc tcggcgcggg
     1321 cgcgctggcc tgcagcgccg gaccgcagga taccgtacgg tattacgaga tcgacccggc
     1381 catcgtcggc atggcgcgag ctccgcatct gttcagcttc ttacacattt gccggcccga
     1441 cgtgccgatc atcctcggcg acgcgcggct caccctcgcc gaagcgcccg acggcgccta
     1501 tgacctcatc atcgtcgatg cgttctcctc cgatgcgatc cccatccatt tgctcacgcg
     1561 cgaggccatg gcgatctatt tcaagaagct cagcgctcac ggcatggtgg tcatgcacgt
     1621 gtcgaatcgc cacctcgagc tcgtttcggt ggtcgcgggc atcgccgcag cgaacgggct
     1681 gatgacactc gtcagcgaag gcgcggacat cgacgaggcg gcaaatccct acaagttcag
     1741 cgctacggtt gccgcggttg cgcgcagcga ggaagatttc gggcccctcg cgcactccgc
     1801 ggattggaag ctcgagagcc ctgatccgca gcagtgggtc tggagcgacg attactccaa
     1861 tatcgtcggc gcggtgatcc gcaagctgcg cgagtgacac ggatcgctca tctgccagat
     1921 ggcagaccag cgtgtccgag cggactcggg tgagaattcg cagtcgctgg cactagtgcc
     1981 atacccagct tatgagcttg cttaccacgt cgcccaacgt gaggagcacc gcagcccaaa
     2041 cgaaagccga gctaaagttc gcaatttgaa attcccacac cggcattcga aagatgccgg
     2101 ccaccaatgg aaccgaggcg cgcaaaggtc caaaaaagcg gccgataaag atcgcaagcg
     2161 gcccccagcg cttcacaaat gtctcgcccc tgggcagcag ttcggggtgg cgcgacagcg
     2221 gccagatatg tgccaccggc ggtccgagct tcacgccgat ccaataagag agccaatcgc
     2281 cgagcgcagc gcccaccgaa ccggcgaccc aaatcggcca gaaattgaga ttcccgtgac
     2341 tgatcaagac gccgattccg accagcgcag cccaggccgg aatgagcagg gaaatgaatg
     2401 caagcgactc gccgaaggcg agagcaaaaa ctatgggcgc cgcccacgcc tcatggtcac
     2461 gcacaaactc caccacgtgt tgggcgtggg tttcgaggct ctcgaacata tgggaggcgg
     2521 cccggttacc ggctccgtct agcgcggctt gcctcccaac gccagtcggc cggcgcccct
     2581 gtccccaccg cgatccgcct aggggcggca cgtcgcgggc cgaacatgcg cttaaaccct
     2641 tggcaacaac gatggaccac tatccggcca gtcatcggcc tttgaggtcg ccaagttgaa
     2701 ctgatgccga gcttcgccca tatgaacggc gtgggccgcc ctcctccagc cgaataccgg
     2761 cgtcacgttg cggtcgccgc cgtggcatag tcacggctga ttcgtttgcc ctcatgagac
     2821 gcatgcccaa gaccgccaaa gcagcgccca agagcgcccc gcaaaatccg tccaaggacc
     2881 tgttctcgga tttgcccgag atgactgcgc ggcggctctc cggcaaggca gcgcgcgccg
     2941 gcaggtcagc gggcggggcc gaggctcgtt acaccgcgcg cgacatcgaa gtgctcgaag
     3001 ggctcgagcc ggtgcgccgg cgcccaggca tgtatatcgg cggcaccgac gaaaaggcgc
     3061 tgcatcacct cttcgccgag gtgatcgaca attcgatgga cgaggcgctt gccggggatg
     3121 ccagcttcat cgaggtcgag atggaggcgg acggcttcgt gagcgtgacc gacaatggcc
     3181 gcggaattcc cgtcgatccg catcccaagt tcaagaacaa gtcggcgctg gaagtggtca
     3241 tgtgcacgtt gcacgccggc ggaaagttcg actcgaaggt ctatgagacc tcgggcggct
     3301 tgcacggtgt cggtgtctcg gtcgccaacg cgctatcgga gcgcatggag gtcgaggtcg
     3361 cgcgcgagca gacgctgcac cgcatggtgt tcgagcgcgg caagccgaaa ggcaagttgc
     3421 aaaagctcgg ccgggtctca aaccgtcgcg gcacgaaggt gcgcttccgg cccgatccgg
     3481 aaatctttgg agcaaaggcg cacttcaagc cggagcgcgt gttcaaaatg gctcgctcca
     3541 aggcctattt gttcggaggt gttgagatcc gctggtcctg cgccaaggag cttctgcgcg
     3601 gggtcgaggg cgtaccggag aaggacacct tccatttcgc ggatggtctt aaggattacc
     3661 tgtccacggc gatcgacggc gccgcgctcg tccatcccga tatcttcacc ggcagcgcgg
     3721 gcaaaatcgg ggtgcacggt gctgcgcaat gggccgtcgc ctggaccgcg gacagcgacg
     3781 gctccttatc ctcctattgc aacacgattc cgacgccgga cggcggcacg cacgagtcgg
     3841 ggctgcgcag tgcgctgttg aagggcatca aggaccatgc cgagcgggtg ggacaaggca
     3901 aacgcgcggc gccggtcact ggcgacgacg tgatgaacgg cgcggcctgc atgatctccg
     3961 tattcatccg cgagccggaa ttccagggcc agaccaagga tcggctggcg accgcggagg
     4021 ccacgcgcat cgtcgagaac gcgatccgcg atccattcga ccactggctc gccggcaatc
     4081 ccacgcaagc caacaagctt ctcgacttcg tcgtcgagcg ggcggaggag cgcatgcgcc
     4141 gccgccagga gaaggagaat ttacgcaaga gtgcggtgcg caaactgcgg ctgcccggca
     4201 agctcgccga ctgcaccaat accgcgaccc aaggctccga gatcttcatc gtcgagggcg
     4261 attccgccgg cggctcggcg aagcaagcgc gggatcgcgc ctcgcaagcg gtgctgccgt
     4321 tgcgcggcaa gattctcaac gtcgcgtccg ccggcaagga caagctggcg cagaatcaac
     4381 aactgggcga gctgatgcag gcgctgggct gcggcacggg cgcgcactat cgcgaggagg
     4441 atttgcgcta cgacaaggtt atcgtgatga cggatgccga cgtcgatggc gcgcatatcg
     4501 cctcgctctt gatcaccttc ttttatcggc agacgccgag actgatcgac aacggtcatc
     4561 tttatctcgc cgtcccgccg ctctaccggt tgagccatgg cggcaagaat ttttatgccc
     4621 gcgacgacaa acacaaggat gaactcttga aaaaagagtt tcacgccaac gccaaggtcg
     4681 agatcggccg gttcaaaggc ctaggcgaga tgatggcgat gcagctcaag gagaccacga
     4741 tggatccgaa aaagcgcacg ctgttgcgcg tcgtggtggt cgacgacgaa cgcaagacga
     4801 ccgacagctc ggttgaacgc ttgatgggca acaacccgga agcgcgcttc gagttcatcc
     4861 aggagcgggc ggagtttgcg ggcgacgaat tgctcgacgt gtagcgcgcg agcgcacgcc
     4921 gcgccggtgt tcaaaccggc gccgcgtgcg actttgccga caaaggtttg gcgctcgggc
     4981 gccacattcc ggaggcgcgt cgtggggcgg cgcggcagag cttacactcc gtgctctact
     5041 ctttgcccgc gtggtcaccc gagcaatcga accttaacct aattcatgcg gggctgccac
     5101 cgcagccaag gattcatccc cgttttgcac aggcgccgcg cccaggcgag acgcgggaca
     5161 gtgcaacgca aaaagccggc gccgtctcgc agcaccagcg atgcttaggt tcaagcgata
     5221 tcgcaagcgc ctgagcgtgc ggcttgcctg ccgggtctcg gctccgtcag cttcacggcg
     5281 agcagccaag cgacccagag aaaaacgaaa tagagcagca aaaagatcat caggctcgcc
     5341 tgcggccaga tgcaggacat cgctgaaaaa gcatttctcg cgacggtcag cgacaactcg
     5401 ccgggaactc gatcctgccg cggacgtgaa cgctattcct cgaatttcag attggccgcc
     5461 ttgaccacgt cggcgaagac ccggatgtcg gcatcgattt tcttgcggaa ctcttcgccc
     5521 gggccgcccc cgggattgac cgccatcgcc ttgagtttct cgcgcacccc cggatcggcc
     5581 agcgcgcgcc gcaattccgt ctcgagcttg ttggcaatcg ccggtggcgc accggctgcg
     5641 acaaataccc cgctccatag cccgatattc acctccggat agcccgcctc cgccatgctc
     5701 ggcacgttcg gaagctcaaa ggagcgctct gatcccgtca ccgctagggc gcggaccttc
     5761 ccgccctgca caagcggcat cgtgggcgga ccatcggcga tggagaacaa ggtgttgccg
     5821 ccggccacgc tgagcatcat ctcgttgctg ctcttatagg gcactgcgac cgcgggcatc
     5881 ccggttttga gcttgaacag ctccgttgtg atggtgaaag ccggcgagga ggtcgcgtag
     5941 ttggacttgt ccgggtttgc tttgccgtag gcaacgaggt ccttcaccga gttgatcgcg
     6001 tcgttagcgg gaccagcgag gatcagcgga aacgatgcga tcatggtcag cggcagaaag
     6061 tcgcgggtgg gatggtacga aagtttcggg tagatcgcgg ctgcgaccgc catctggccg
     6121 ctcgccgcca ccatgatcgt gtatccatcc gcaggctggc tcttgacgta ttcgaccgcg
     6181 atccggccgc cggcgcctgc cttgttctcg acgatcaccg gttggccgat gttttccgac
     6241 agcttctgtc cgacgaggcg cgcgaaaaga tcgttgccgc cgccggccgc aaagccgacg
     6301 atcaaatgga tcggccgagt agggaaactc gccgcgctgt cgccttgcgc acccgccgcc
     6361 cccgccacga tcgcggccag ccccaccaag cccgccgtga gcatggtgcg tttgaaatgg
     6421 accatgggcc ttcctccgcc gttatttctc gccacagcgt tttctcagat cgcgggcagc
     6481 gtcaagtgtg taccgagacg gcccccgctt tgccagcctg cggcgggccc ggctgcgctg
     6541 gtttgacgcc ggcgcgaggc gcgttctagg gtcgcgcgcc tcgttggcgg tattgccggg
     6601 caaaatctaa tcgagcatac aaccgccaac aattcacgaa ccgcgatcac acatcatggt
     6661 gtactcgacg gccgagcaac gtcatcgcag cagacgagga gcgcgcgacc tcttcggcca
     6721 tccgcgcggg ctcactttcc tgttcgcgac cgaaatgtgg gagcgcttct cctattacgg
     6781 gatgcgggcc ttgctcgtcc tgtacatggt gaagcttctg ttgctgccgg gacacgccga
     6841 caacgtcata gggctcacga cgttgaggtc ctttttcgag tcaatgactg gccccctcgg
     6901 agtgcaacct ttctcctcgc acatctacgg gctctatact gggctcgtct atctcacgcc
     6961 tgtgttcggc ggcatgctcg ccgaccgcgt gctgggacag caccgcacca tcgtccttgg
     7021 cgcggcgatg atggcgatcg gccacttcat gatggccttc gagccgctgt tcctgctcgc
     7081 cttgaccatg ctcattcttg gcaatggtgc attcaagccc aacatgtcgg cacaggtagg
     7141 cggactttat gcgcgcggcg atccgcgccg tgaccgtgcc tattcgatct tctacgtcgg
     7201 catcaatgtc ggggcatttc tcgcaccgct ggtctgcgga acgctgggcg aacagctggg
     7261 ctggcattac ggcttcaccg ctgccggcat cggcatgacg atcgcgctcg ccatctatct
     7321 ctacgccatg cccgaactac cgccagacga actgcacaag gccatggccg cgggcatcgc
     7381 gaacaaaccg ctcgaccgca gcgagcggcg cggcatcctg gcgctgatcg cgctgttcgt
     7441 gccgacgacc ttgttctggg caacttacga gcagcaaggc aacacgatcg ctttgtgggc
     7501 ggacgaccat accgaccgcg cgatcaatct catcctctgg cacggcgaaa ttccggtcac
     7561 ctggttccag gcgttcaatc ccttcatgat cttcgctttc acgcccttgg tcgtggcgct
     7621 ctgggcttgg caggctaagc gcggcaagga gccctcgacc gtcaccaaga tgtcgatcgg
     7681 ttgcttcggc gtgacgctcg ccaatttgat catggtcgcc gctgcttggc aggccgcggg
     7741 cgacgaagca agctggcttt ggctgctcgg gtatttcgta gtcatcacca tcggtgagct
     7801 ctacttgtcg ccgatcgggc tctcgctggt gtcgaaagtc gcaccggcgc gcatggtctc
     7861 gatgctgatg ggactgtggc tggcaacgag ctttgccggc aatttgatcg ccggctggct
     7921 gggcagcttc tggtccggca tggacaagac catgttcttc ctcgtgatcg ccggcatcgc
     7981 gttcgttgcc ggcgccgtca tcctggcatt cgaccggccg ctcaagcgcg cgatcaggga
     8041 ccaggcctcg gcgtcatgaa ttccactcgt cccgcgccgc gcgccttcgg tcatgtggag
     8101 acgtgggttt tcgatctcga caacacgctt tatccccatc acctcaacct gtggcagcag
     8161 gtcgacgagc gcattcgcga gtacatcgcg ggctatctca aggtccctca cgaggaggca
     8221 ttccgcctgc agaaagatta ctacaagcgt tatggcacct cgatgcgtgg gctcatgacc
     8281 gagcacggca tggagcccga tgacttcctc gatttcgttc atcagatcga ccattcgccg
     8341 ctcacgccga atgcggcgct ggcggcggcg atcgaggtcc tgccgggtcg caagctgatt
     8401 ttgaccaacg gcacgcgccg ccacgccgat gccgtgctcg cccggct
//
LOCUS       DATCWM010000131         3765 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_297963, whole genome shotgun sequence.
ACCESSION   DATCWM010000131 DATCWM010000000
VERSION     DATCWM010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3765)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3765)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3765
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_297963"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1056)
                     /locus_tag="VIQ50_02400"
     CDS             complement(<1..1056)
                     /locus_tag="VIQ50_02400"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY9359257.1"
                     /translation="MVSETSDLHRVIVVGGGAGGLELVTRLGNKLGRYKRADVTLVDK
                     CRAHLWKPLLHEIGAGSMDLGVHEIDYLAQAHWHHFRYRIGELIGLDRRARAVHLAAH
                     VDDEGQQVTQPRSFNYDTLVIAIGSQSNDFGTPGVREHALSLDTPLEAKRFHSRLVNA
                     YIRGHAQSTPLRPEQLQVAIIGAGATGTELAAELHYTTRQVVAYGLDRIDSNRDIKIN
                     LIEAADRILPALPERLSNSAAALLKDLGVRVCASSKVAEVATNGVKLASGEFIPAELV
                     VWAAGVKAPDVLKDLDGLETNRLNQLVVTSTLQATRDENIFVIGDCAACAWNGKPDQN
                     VPPRAQAAHQQATHAFKQ"
     gene            complement(1092..3395)
                     /locus_tag="VIQ50_02405"
     CDS             complement(1092..3395)
                     /locus_tag="VIQ50_02405"
                     /EC_number="1.1.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004470 - malic enzyme activity [Evidence
                     IEA];
                     GO_function: GO:0004471 - malate dehydrogenase
                     (decarboxylating) (NAD+) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent malic enzyme"
                     /protein_id="HEY9359258.1"
                     /translation="MEEQLRRDALEYHRVPTSGKISVTPTKSLVNQRDLALAYSPGVA
                     YACLAIRDDPKEAATLTSRANLVAVITNGSAVLGLGNIGALAGKPVMEGKGCLFKKFA
                     GIDVFDIEVDESDPDKLVEIVASLEPTFGGINLEDIKAPECFYIERALRERMKIPVFH
                     DDQHGTAIIAAAAVLNGLELVGKNISNVKIACSGAGAAAIACLDQLVSLGVRMENILV
                     TDAKGVVYEGRLEGMDPIKARYARPTSARTLGDIIEGADIFLGLSAGGVLKPDMVKRM
                     AKDPLILALANPTPEILPEEAKAVRPDAIIATGRSDYPNQVNNVLCFPFLFRGALDVG
                     ATTINEAMKSAAVRAIASLAHAELSDVVATAYGDQRLQFGPDYLIPTPFDPRLIERIA
                     PAVAKAAMESGVASRPLADLEAYRQTMARFMYRSGASMEPVFAAAKVAQKQIALAEGE
                     DDRVLRAAQLIVDESLGRPVLVGRPDVINPRIESLGLRLEGGRNCEIVCFENDRRYEE
                     SWREYYDLVRRSGVTQTLAREGMRNRSTLIAAMLLRRGDVDAMLCGTSGAFAEHLNYV
                     RQVIGLREGVRTLGTMNMVILGGRPLFMCDTYVNFDPSPEQLAELTLLAAEEVRRFGL
                     APSVALLSHSSFGSADSPSAGKMRAALALIQLQAPDLAVEGEMHADAALSKRVLDRVF
                     PDSHLAEEANLLIMPSLDAANIAFNLLRAAAGGGVTVGPILLGADKSAHILTQTATVR
                     GILNMTALAVVDAAQTSARALPRMAAE"
     gene            complement(3436..>3765)
                     /locus_tag="VIQ50_02410"
     CDS             complement(3436..>3765)
                     /locus_tag="VIQ50_02410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020181030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEY9359259.1"
                     /translation="EEQCKAQGIKYGKAVFPWAASGRAIANGRDEGFTKLLFDEANHR
                     LLGGGIVGTHAGDLIGEVCLAVEMGCDPADVGKTIHPHPTLCESIGMTAEVFEGVCTD
                     LPPARKR"
BASE COUNT          625 a         1207 c         1223 g          710 t
ORIGIN      
        1 ctgcttgaag gcgtgcgtcg cttgctggtg tgccgcctgg gctcggggcg gaacgttctg
       61 gtccggcttg ccattccagg cgcaggccgc gcagtcgccg atgacgaaaa tgttctcgtc
      121 gcgggttgct tgcagggtcg atgtgacgac cagctggttg agacggtttg tctccaaacc
      181 gtcgaggtcc ttgagcacat cgggcgcctt gacgccggcg gcccagacga cgagttccgc
      241 cggaatgaat tcgccgcttg caagtttcac tccgtttgtc gcgacctcgg ctacttttga
      301 tgaggcacag acgcgcaccc cgaggtcctt caaaagggca gccgccgaat tcgacaaccg
      361 ttcgggtagc gccggcaata tgcggtctgc cgcttcgatg agattgatct tgatgtctcg
      421 gttggaatcg atgcgatcga gaccgtaggc aacgacctgt cgcgtcgtgt agtgcaattc
      481 cgcggcgagc tccgttcccg tggctcctgc accgatgatc gccacctgga gttgctcggg
      541 ccgcagcggc gtggattgcg catggccacg gatgtatgcg ttcaccaggc ggctgtgaaa
      601 ccgcttggcc tccaggggcg tatccagcga caacgcgtgc tcgcgtacgc ccggtgtgcc
      661 aaagtcattg ctctgactgc cgatcgcgat gaccagcgta tcgtaattaa agcttcgcgg
      721 ctgcgtgacc tgctgtccct cgtcgtcgac atgggcagca agatgaacgg cgcgcgcgcg
      781 ccgatcgagc ccgattagct cgccgatgcg atagcggaaa tgatgccaat gcgcctgcgc
      841 caggtagtcg atctcgtgca cgccgagatc catgctgccg gctccgatct catgcagcag
      901 cggcttccac agatgggcgc ggcatttgtc gacgagggtc acgtcggccc gtttgtaacg
      961 acccagcttg ttgccgagcc gggtcacgag ctccagcccg ccggcgccgc cgccgacgac
     1021 gatgacgcga tggagatcgg acgtctcgct caccatgtgt tccattccga gcttgccggc
     1081 gtcggacagg gtcactccgc cgccattcgg ggcagcgcac gcgcgctggt ctgtgccgca
     1141 tcgacgaccg ccaacgccgt catgttgagg atgccgcgga ccgtggcggt ctgagtcaga
     1201 atatgagcgg acttgtcggc accgagcagg atcggtccta cggtgacgcc gccgccggcg
     1261 gccgcccgca acaggttgaa ggcgatgttg gccgcgtcca gactgggcat tatcaggaga
     1321 ttggcttcct ccgccagatg cgagtcgggg aagacccgat cgagcacccg ttttgacagc
     1381 gcggcatcgg cgtgcatctc gccttccacc gccagatcgg gcgcctgcaa ctgaatgagc
     1441 gccagcgcgg cgcgcatctt gccggcggac ggcgagtccg cgctgccgaa gctcgagtgc
     1501 gaaagcagcg cgacgctggg cgcgaggccg aagcgccgaa cctcctcggc agcgagcagg
     1561 gtgagctcgg cgagttgctc tggtgatggg tcgaaattca cgtaggtatc gcacatgaag
     1621 agcggacgcc cgcccaggat caccatgttc atcgtgccca gcgtgcgcac gccctcgcgc
     1681 aggccgatga cctggcgcac gtagttgagg tgctcggcaa aagcccccga tgtcccgcac
     1741 agcatggcat cgacatcgcc gcggcgcagc agcatcgctg cgatcagcgt cgagcggttg
     1801 cgcatgccct cgcgcgccag cgtctgggtc acgccgctgc ggcgcacgag gtcataatac
     1861 tcgcgccagc tttcctcata ccggcgatcg ttttcaaaac agacgatctc gcagttgcga
     1921 ccgccctcta ggcgcaaccc caaggattcg atgcggggat tgatgacgtc gggacgcccc
     1981 acaagaacgg gtcttccgag actttcgtcg acgatgagct gcgccgcacg cagcacgcga
     2041 tcgtcttcac cctcggccag tgcaatctgc ttctgcgcga ccttggccgc tgcgaagacc
     2101 ggctccatgc tcgcgccgga ccggtacatg aagcgcgcca tggtttgccg gtaggcttcg
     2161 aggtcggcca gcgggcgact cgccacgccg ctctccatcg cggccttggc taccgctggc
     2221 gcgatgcgct cgatcaggcg cggatcgaac ggagtgggga tcaggtagtc ggggccgaat
     2281 tggagacgct gatctccata ggcggtggcg acgacatccg acagctccgc gtgcgctagg
     2341 ctggcgatgg cacgaacggc ggccgatttc atcgcctcgt tgatggtcgt tgcgccgaca
     2401 tcaagggcgc cgcggaacag gaagggaaag cacaggacgt tgttgacctg gtttggatag
     2461 tcagagcggc ccgtcgcgat gatggcatcg ggacgtacgg ccttggcttc ttccggcaag
     2521 atctccgggg tcgggttggc caatgccagg atcagcgggt ccttcgccat gcgtttgacc
     2581 atgtccggct tgagcacgcc gccggccgac agcccaagaa agatgtcggc cccctcgatg
     2641 atgtccccca gggtgcgcgc ggaagtcggc cgcgcatagc gcgccttgat cgggtccatt
     2701 ccttcgaggc ggccctcgta cacgacacct ttcgcatcgg tgacgagaat gttttccatg
     2761 cgaacgccga ggctgacgag ttggtccagg caggcgatgg ccgccgcacc ggcgccggag
     2821 caggcgatct tcacgttgct gatgttcttg ccgaccagct cgaggccatt gaggacggcc
     2881 gccgcggcga tgattgcggt gccgtgctga tcgtcgtgga acaccggtat cttcatgcgc
     2941 tcccgtagcg cccgctcgat gtagaagcac tccggggcct tgatgtcctc gaggttgatt
     3001 ccgccgaagg tcggctccag gctggccacg atctcgacca gcttgtccgg atcgctctcg
     3061 tccacctcga tgtcgaacac gtcgatgccg gcgaacttct tgaacaggca gcccttgcct
     3121 tccatcaccg gcttgccggc gagcgccccg atattgccga ggccgagtac ggcggagccg
     3181 ttggtgatta ccgcaaccag gttggcgcgc gacgtcagcg tggccgcttc cttcgggtcg
     3241 tcccggatgg cgaggcacgc gtaggcgacg ccgggcgaat aggcgagcgc gaggtcgcgc
     3301 tggttcacca ggcttttggt cggcgtgacg gagatttttc ccgacgtcgg cacgcgatga
     3361 tattccagtg cgtcgcggcg cagctgttct tccatcatgt cctcccactg tctctcgtcg
     3421 cgcagacgcg actcgctatc tcttcctggc aggcggcaga tcggtgcaca cgccctcgaa
     3481 cacttccgcc gtcatgccga tcgattcgca caatgtggga tgcgggtgga tggtcttgcc
     3541 gacgtcggcg ggatcgcatc ccatctccac ggcaaggcag acctcgccga tcaggtcgcc
     3601 cgcatgggtg ccgacgatgc cgccgccgag caggcggtga ttggcctcat cgaacagcag
     3661 tttggtgaac ccctcgtcgc gcccgttggc gatcgcgcga cccgatgccg cccacggaaa
     3721 cacggccttg ccgtacttga tgccttgcgc cttgcattgc tcctc
//
LOCUS       DATCWM010000132         4403 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_22618, whole genome shotgun sequence.
ACCESSION   DATCWM010000132 DATCWM010000000
VERSION     DATCWM010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4403
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22618"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..772
                     /locus_tag="VIQ50_02415"
     CDS             <1..772
                     /locus_tag="VIQ50_02415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359260.1"
                     /translation="FAFGTAVPFGLNSRMQTAWMYFGGGMELMNDLYKKFNIYGIPAG
                     NTGAQMGGWFRKEIKELADLNGLKMRIGGFAGHVISKLGVVPQQIAGGEIYPALEKGT
                     LDACEWVGPYDDEKLGFQKVAQYYYYPGWWEGGPMLHNFINLDKWNALPPAYKSLLRT
                     ASSMANEWMQAKYDAANPAALKRLVAGGAQLRPFPQPVMDASLRAALDVYAEVSKTND
                     DFKKVWEALLAFRNDQYLWWQVAELTYDSYLVRNRSRT"
     gene            998..2086
                     /locus_tag="VIQ50_02420"
     CDS             998..2086
                     /locus_tag="VIQ50_02420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEY9359261.1"
                     /translation="MKRREFLKAAGTGIAASAVAAPAIAQSMPELRWRLTASWPKSLD
                     TLYGAPEYMAKRIAELSDNKFHIQVFAAGEIVPGLQVLDAVQSGTVEMGHTASYYYFG
                     KDPAFTFGTALPFGLNTRQQEAWQFHGGGMELLNDFFKTYNCWGMPTGNTTCQMGGWF
                     RREIKSLDDMKGLKFRVGGFAGRILGKLGVVPQQLAAGDIFPSLEKGTIDAAEWVGPY
                     DDEKLGFVKIAKYYYYPGWWEGGAQPHLLINLPKWNELPKIYQAMIQACAREAGAWMT
                     AKYDVLNPQAVKRLVASGAELRPFPQPVMEACYNSANEIYAELAQSNAHFKRMLDSLT
                     AFRSDSYQWMQVAELAFDSFMMRMRTRA"
     gene            complement(2141..3568)
                     /locus_tag="VIQ50_02425"
     CDS             complement(2141..3568)
                     /locus_tag="VIQ50_02425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY9359262.1"
                     /translation="MIHFVRENMAPLMFGGMVLFMLIGYPAAFSLAATGLFFGFIGIE
                     LGLISPDFLGNLTYQLFGIVSNELLLAIPFFTFMGAILERCGLAEDLLDSIGQLFGPV
                     RGGLSYAVIFVGAILGAITGTVAASVIAMGVISMTPMLKYGYSTRHTMGVIAASGTIT
                     QLIPPSLVLVVLADQLGRSVGDMYAGAIGPSIIQLGLFCAWVAIVSVLWPKDVPALPL
                     EARTLKGWALWIKCLRGIIPSLGLIFLVLGTIFMGLATPTEAGALGVVGAIALAASYG
                     TLTWSLLYQGMSTTMRITAMVVYILIGARTFSLVFQGVGGKVWIEDLLTSLPGGQIGF
                     LIFVNAFIFVIAFFLDFFEIAFIIIPLLAPVADKLGIDLIWFGVLICANIQTSFMHPP
                     FGFALFYLRGIAPKSIKTSEIYWGAIPWVLLQVILVIIVIFWPGSVSYWIDRSPSIDP
                     SKIKIEIPQPDLPPPLDFGPPAQPQ"
     gene            complement(3565..4104)
                     /locus_tag="VIQ50_02430"
     CDS             complement(3565..4104)
                     /locus_tag="VIQ50_02430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016737275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HEY9359263.1"
                     /translation="MEGLLKLSRAIDCVNDRFGEIANWLVLFACLISAGNAASRYLFS
                     ASSNAWLEVQWYMFAGMVLLGGPYTLKLNEHVRVDLVYSALSERARIWIDIIGCLLFL
                     LPICIILVYFTWSWFVESWRIDETSSNAGGLVRWPVKLILPVGFALMALQGISELIKR
                     IEALLHHHRLQFEYEKPLQ"
BASE COUNT          947 a         1313 c         1400 g          743 t
ORIGIN      
        1 cttcgccttc ggcacggcgg tgccgttcgg gctcaacagc cgcatgcaaa ccgcgtggat
       61 gtatttcggg ggcggcatgg agctgatgaa cgatttgtat aagaagttca acatctacgg
      121 aattccggcc ggcaataccg gcgcgcagat gggcggatgg tttcgcaaag agatcaagga
      181 gctcgccgat ctcaatgggc tgaaaatgcg catcggagga tttgccggcc acgtcatatc
      241 aaagttgggc gtggtgccgc agcagatcgc cggcggagag atctatccgg cgctggaaaa
      301 gggcacgctt gatgcgtgcg agtgggtcgg tccctacgat gacgaaaagc tcgggttcca
      361 gaaggtggcg cagtactact actacccggg ctggtgggag ggcggaccca tgctgcacaa
      421 cttcatcaat ctggataagt ggaacgcgct gccgcccgcc tacaagtcgc tcctgcggac
      481 cgcatcgtcg atggcaaacg agtggatgca ggcaaaatac gacgccgcca atccggccgc
      541 gctcaagcgc ttggtggcgg gcggtgcgca gctgcgaccc ttcccgcagc cggtgatgga
      601 tgcttcgttg cgcgcggcgc tcgacgtcta cgccgaagtg tccaagacca acgacgattt
      661 caagaaggtg tgggaggcgc tgctcgcttt ccgcaatgac caatatctat ggtggcaggt
      721 ggcggagctg acctacgact cttaccttgt gcgcaatcgt agccgcacct gattgccgcg
      781 cgcgcccata tccagcctgg aaagccgcgc cgatttcatc gcgagcgcga ccgcgccgca
      841 gacgcccgta tacgtctcct tctcgcccgt ctaaactatc gacctcttcg ccgaactcgc
      901 caattgcacc tcacgcgtgg cgaagagcca cacgccgtgc aacgtccggc ggccggtcca
      961 aaaaaatggc cagcggccga tcgggaggac tcaaccgatg aaacgacggg aatttctcaa
     1021 ggcggcgggc accgggattg cggcctccgc ggttgccgcg ccagccatcg cccagtcgat
     1081 gcccgagctg cgatggcggc tgacggcgag ctggccgaag tcgctcgaca cgctctatgg
     1141 cgcgcccgaa tacatggcca agcgcatcgc tgaactcagc gataacaagt ttcacatcca
     1201 ggtgtttgct gcaggcgaaa tcgtgcccgg tctgcaagtg cttgacgccg tgcagagcgg
     1261 caccgtggag atggggcaca cggcgagcta ctactatttc ggcaaggatc cagccttcac
     1321 gttcggcacg gccttgccct tcggcctcaa cacgcgtcag caagaggcct ggcaattcca
     1381 tggcggcggc atggagctgc tcaacgattt cttcaagaca tacaactgct ggggaatgcc
     1441 gaccggcaat acgacctgcc agatgggcgg ctggttccgc agggagatca agagcctcga
     1501 cgacatgaag ggcttgaagt tccgcgtcgg cggcttcgcc ggccgcattc tgggaaaact
     1561 cggcgtggtg ccgcagcagc tcgcggcggg cgacatcttt ccgtcgctcg agaagggcac
     1621 gatcgatgcc gccgagtggg tcggccccta tgacgacgag aagctcggct tcgtgaaaat
     1681 cgcgaaatat tactattacc ccggttggtg ggaaggcggc gcgcaaccac accttctgat
     1741 caatctcccc aagtggaacg aactgcctaa gatctatcag gcgatgatcc aggcctgcgc
     1801 ccgcgaggca ggggcgtgga tgacggcaaa atacgacgtg ctcaatcccc aggcggtgaa
     1861 gcggctcgtc gcctccggcg ccgagctgcg tccgttcccg cagccggtga tggaggcttg
     1921 ctacaattcg gccaacgaga tctacgccga gctggcgcag agcaacgcgc atttcaagag
     1981 gatgctggac agcctgaccg cgttccgcag cgactcctat cagtggatgc aggtggcgga
     2041 gctcgcgttc gacagcttca tgatgcgcat gcgcacgcgg gcctgaccaa gcctattcat
     2101 cccgatggcg gccccggagc ttccgtcgcg ggccgcttct tcattgcggc tgcgcgggcg
     2161 ggccgaaatc gagcggcggc ggcagatcgg gctggggaat ttcgattttg atcttggagg
     2221 ggtcgatgct agggctgcgg tcgatccagt agctcaccga gcccggccag aatatgacga
     2281 tgatgacaag aatgacttgt agcagtaccc agggaatggc gccccaataa atctccgacg
     2341 tcttgatcga ttttggcgcg atgccgcgca gatagaacaa agcgaagccg aacggcggat
     2401 gcatgaagct cgtctgaata ttggcgcata tcagcacgcc gaaccagatg agatcgatgc
     2461 caagcttgtc ggcgacggga gccaacagcg ggatgatgat gaaggcgatc tcaaaaaaat
     2521 cgaggaagaa ggcgatcacg aagatgaagg cattgacgaa gatcaggaag ccgatctgtc
     2581 cgcccggcag cgacgtcagc aggtcctcga tccatacctt tccgcccacg ccttgaaaca
     2641 cgaggctgaa ggtgcgcgcg ccgatcagga tgtagaccac catggcggtg atgcgcatgg
     2701 tggtcgacat cccttgatag agcagcgacc acgtgagcgt gccgtaagag gcggcgagcg
     2761 cgatggcgcc gacaacgccc aaggctcccg cctcggtggg cgtggccagt cccatgaaga
     2821 tggtccccaa caccaggaag atcagtccga gcgagggaat gatgccgcgc aggcatttta
     2881 tccacagcgc ccagcccttc agggtgcgcg cttcgagcgg caaagccggc acgtctttcg
     2941 gccatagcac gctgacgatc gccacccagg cgcaaaacag cccgagctga atgatgctcg
     3001 gaccgatggc gcccgcgtac atgtcgccga ccgagcggcc aagctgatcg gcgagcacca
     3061 ccagaacgag ggagggcgga atgagctgag tgatcgtgcc cgacgccgcg atcacgccca
     3121 tcgtatgccg cgtcgaatag ccgtacttca acatcggcgt catcgagatc acgcccatgg
     3181 cgatcaccga agcggcgacc gtgccggtga ttgcgccgag aatggcgccg acgaaaatca
     3241 ccgcatagga caagccgcca cgcaccgggc cgaacaattg tccgatcgaa tcgagcagat
     3301 cctcggccag tccgcagcgc tcgaggatgg cgcccatgaa ggtgaagaaa ggaatcgcga
     3361 gcagcagttc gttggagacg atgccgaaca actgataggt gaggttaccg aggaagtcgg
     3421 ggctgatgag cccgagctcg atgccgatga aaccgaagaa caggccggtc gcggcgagcg
     3481 agaaagccgc cggatagccg atcagcatga aaagcaccat gcccccgaac atcaggggtg
     3541 ccatgttctc ccgcacgaag tgaatcattg gagcggcttc tcgtactcga actgcagccg
     3601 gtgatgatgc aggagcgcct cgatgcgctt gatgagttcg gagatgcctt gcagcgccat
     3661 cagcgcgaag ccgacgggaa gaatgagctt caccggccag cggacgaggc cgccggcatt
     3721 cgacgaggtt tcgtcgatgc gccaggattc cacaaaccat gaccaggtga agtagacgag
     3781 gatgatgcag atcggcagca gaaaaagcag gcagccgatg atgtcgatcc agatgcgcgc
     3841 tcgttccgag agcgccgaat acacgagatc gacgcgaacg tgttcgttga gcttgagcgt
     3901 atagggaccg cccagcagca ccatgcccgc gaacatgtac cactgaactt caagccaggc
     3961 gttggagctc gcgctgaaga gataacggct tgccgcattg ccggcgctga tcaggcaggc
     4021 aaatagcacg agccaattgg cgatctcgcc gaaccggtca ttcacacagt cgatggctcg
     4081 gctgagcttg agcaaaccct ccacgcaccg ttccccgttg gcatggtccc ggcagatggg
     4141 gaccgcgctg ttgcgcagct tcttgttggc cccgagtttt ggctcggccg cagggcacgc
     4201 cgagacggag aactttccta gacgcctgcg cggaggtcaa tcggtaaaac gcgccgcagc
     4261 cgccgacgcc gtgtccggcg tctcgcccca gcgccgccgg tttagccgcc ggtcacgttc
     4321 atgtggcggg cgagcgccgg gcgctgatgg cgccggtcga ttatgaaatc gtggcccttc
     4381 ggcttgcgcg agatcgcctc ggc
//
LOCUS       DATCWM010000133         4623 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_422162, whole genome shotgun sequence.
ACCESSION   DATCWM010000133 DATCWM010000000
VERSION     DATCWM010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4623
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_422162"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(105..1208)
                     /locus_tag="VIQ50_02435"
     CDS             complement(105..1208)
                     /locus_tag="VIQ50_02435"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEY9359264.1"
                     /translation="MPRTKPPFRADHVGSLLRPAALKAARARHECGEITAAELAAIED
                     SEIERAVRKQEDVGLRSVTDGEFRRAFWNYDFLGKLNGVEAYLGERKIKFQGPQPKPM
                     MLRVTGKLDGDGSHPMTEHFKFVAARAKSTAKMTIPSPSSLHFRYGRDAVPAAIYPSM
                     DDFYRDLGQSYRKVVRAFADAGCRYLQLDEVNFAYLCDPKLRALVAERGDDPQALPHV
                     YAAMINAAVSDAPAGMTTAMHLCRGNFQSSFVASGGYEPVAEILFNAIDIDAYFMEYD
                     SERAGGFEPLRFVPKDKTVVLGLVTSKRGSLEPKDALKRRIEQAAKFIDLEQLCLSPQ
                     CGFASTEEGNILTEDEQWAKLRLIVDVADEVWG"
     gene            complement(1382..2263)
                     /locus_tag="VIQ50_02440"
     CDS             complement(1382..2263)
                     /locus_tag="VIQ50_02440"
                     /inference="COORDINATES: protein motif:HMM:NF012976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0018576 - catechol 1,2-dioxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0009712 - catechol-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dioxygenase"
                     /protein_id="HEY9359265.1"
                     /translation="MPYVTEANLTDVALERWKDIPDPRLRQIMQSLIKHLHAFLRDIE
                     PTQAEWAAAIDWLTRTGKLSSEKRHEFILASDVLGVSMLVDAINHRQPSGATPSTVEG
                     PFHVPDAPAMSHGGNMAQGAPGIACFVTGTVRGLDGEPIAGAVLDLWQTDGEGLYEDQ
                     RDVKGPWMRGLYRTQRDGSYVIRTVAPIAYTIPMDGTVGELMEQTNISHMRPAHIHFA
                     VSAPGYHGLITHLFQRDGEYLDTDVVYAVKEPLIVDFVKRPPGKAPTGETMTAPFYEV
                     TYDFVLAKGAEALAAAE"
     gene            complement(2302..3324)
                     /locus_tag="VIQ50_02445"
     CDS             complement(2302..3324)
                     /locus_tag="VIQ50_02445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008962980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase family protein"
                     /protein_id="HEY9359266.1"
                     /translation="MLLPTTLVGSYPQPVWLIDQGKLSKQVPRVRAQDLWLIDPDRLE
                     AAQDDATLLAIRDQERAGLDIITDGEQRRESYSNRFATALAGIDLDNPGKTPNRTGGF
                     STVPRVVGPIRRKHPVEVRDVEFLRANTERTIKMTVPGPFTMSAQCQDDFYGDGERLA
                     LDYAAAVNAEIKDLFAAGADIVQIDEPWMQSRPEEARKYGLKALDRALAGVGGTTAVH
                     ICFGYAAVVKDKPSGYSFLAEFERSAVDQVSIEAAQPKLDVSILQQLSSKTIILGVLD
                     LSDRTVETPDTVAGRIRKALPFAPVDRIVVAPDCGLKYLPREVAFAKMRAMVEGTAIV
                     RRELAA"
     gene            complement(3445..4551)
                     /locus_tag="VIQ50_02450"
     CDS             complement(3445..4551)
                     /locus_tag="VIQ50_02450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HEY9359267.1"
                     /translation="MKRTKPPFRADHVGSFLRPAVLREARAKREKGAITAAELKAVED
                     REIENNIKKQEELGLQLATDGEFRRSWWHFDFLGMLDGVEIYEAEQGIQFRGVQTKAQ
                     GLRIVGKIGFSDHPMLEHFKFLKAHTKVTPKMTIPAPPVLHFRLPKDGIKKNVYPDLD
                     QFFHDLATAYQQAIKAFYQAGCRYLQFDDTVWAYLCSQEELRKARERMSNVDQLQGIY
                     ARVINTALEAKPADMTITTHVCRGNFRSTWISEGGYEPVAETLLGKVNYDGYFLEYDT
                     ERAGGFEPLRFLPKGNKLVVLGLVTSKSGTLEKKDDVKRRIDEAGKFAPLEQFCLSPQ
                     CGFASTEEGNVLAEEEQWAKLRMIVDVAGEVWGR"
BASE COUNT          795 a         1475 c         1453 g          900 t
ORIGIN      
        1 tttcagcggc gccggccgca gcaagctgcc cacgtgatcg gcgcggaacg gcggcttcga
       61 tcgcttcatg cccataccct tctcgtcttc tgtcgggttg cccctcagcc ccaaacctcg
      121 tcggccacat cgacaatcag gcgcagcttc gcccactgct cgtcctcggt caaaatattg
      181 ccttcctcgg tcgaggcgaa gccgcattgc ggcgacaggc agagttgctc gaggtcgatg
      241 aattttgccg cctgttcgat gcggcgcttg agagcatcct tcggttcgag gctgccgcgc
      301 ttcgaggtga ccaatccgag caccacggtc ttgtccttgg gaacgaagcg cagcggctcg
      361 aagcctccgg cgcgctcgct gtcgtattcc atgaaatagg cgtcgatatc gatggcgttg
      421 aacaggattt cggcgaccgg ctcgtagccg ccggatgcga cgaagctcga ttggaaattg
      481 ccccggcaaa gatgcatcgc cgtggtcatg ccggcggggg cgtcggagac cgccgcgttg
      541 atcatggcgg catagacgtg cggcagcgcc tgcggatcat ccccgcgctc ggccaccaac
      601 gcgcgcagct tgggatcgca gagataggcg aagttgacct catcgagctg caagtaccgg
      661 cagccggcgt cggcgaaggc gcgcacgact ttgcggtagc tttgcccgag gtcgcggtag
      721 aagtcgtcca tgctcggata gatcgccgcc ggcacggcat cgcgcccgta gcggaaatgg
      781 agcgacgacg gcgacggaat cgtcattttc gccgtcgact tggcacgcgc agcgacgaat
      841 ttgaaatgct cggtcatggg atgggaaccg tcgccgtcga gttttccagt gacgcgcagc
      901 atcatcggct tgggttgcgg accttggaac ttgatcttgc gctcgcccag ataagcttcg
      961 acgccgttga gcttgccgag aaagtcgtaa ttccaaaacg cgcggcggaa ttcgccgtcg
     1021 gtaaccgagc ggagcccgac atcctcttgc ttgcggaccg cccgctcgat ctcactgtcc
     1081 tcaatcgccg cgagctcggc cgcagtgatt tccccgcatt cgtgcctggc gcgcgccgcc
     1141 ttgagcgcgg cggggcgcag caggcttccc acgtgatcgg cacggaacgg aggcttggtt
     1201 ctgggcatga tgacgtcggc ccttggcttt gcgccgggca aagaagctac gtctgcgccg
     1261 gcgagcgatc ccggcgccgt ctcggccgac ctcgctcgcg cgcgccgcct tgcccggggc
     1321 tcgaaggacg gcgtcggctg ttccggcgcc gactgggctg tgtcggattg cgtcggactc
     1381 ctcactcggc cgcggcgagc gcctcggctc ccttcgccag cacgaagtcg tatgtcacct
     1441 cgtagaacgg cgccgtcatg gtttcgccgg tcggcgcctt gccgggaggc cttttgacaa
     1501 agtcgacgat cagcggctct ttcacggcat aaacaacgtc ggtgtcgagg tactcgccgt
     1561 ctctctgaaa gaggtgggtg ataaggccgt gatagcccgg tgcggagacc gcgaaatgaa
     1621 tgtgcgccgg ccgcatatgg ctgatattgg tctgctccat cagctcgccc acggtgccgt
     1681 ccatcgggat cgtgtaggcg atcggcgcca cagtgcggat cacgtaactg ccatcgcgtt
     1741 gcgtgcggta gagcccgcgc atccaaggtc ctttcacgtc gcgctggtcc tcgtagaggc
     1801 cttcgccgtc ggtctgccac agatcgagca ccgctcccgc gatcggctcg ccgtcgaggc
     1861 cgcgcaccgt cccggtcacg aagcaggcga tgccgggcgc tccctgcgcc atgttgccgc
     1921 cgtgcgacat tgccggcgcg tcgggcacat ggaacggacc ttccaccgtg ctcggcgtcg
     1981 caccgctggg ctggcgatga ttgatggcgt cgaccagcat gctcacgccc aggacgtccg
     2041 aagcaaggat gaattcgtgc cgtttctccg agctcagctt gccggtgcgc gtgagccaat
     2101 cgatggcggc ggcccattcc gcctgcgtcg gctcgatgtc gcgcaagaag gcgtgcagat
     2161 gcttgatcag ggattgcatg atctgccgca ggcgcggatc gggaatgtcc ttccaccgct
     2221 ccagcgcgac atcggtcagg ttggcttcgg tcacgtaggg catggtcggc tcctcatttc
     2281 cttgtgttgc agcacgttat ctcaagccgc gagctcgcgg cgcacaatcg cggtgccttc
     2341 gaccatggcg cgcatttttg cgaatgcgac ctcgcgcgga agatatttca ggccacaatc
     2401 cggcgccacc acgatccgat cgaccggcgc aaacggcaat gccttgcgga tgcgcccggc
     2461 gaccgtgtcc ggcgtctcga ccgtgcggtc ggagagatcg agcacgccga gaatgatcgt
     2521 cttagatgac aattgttgca agatcgaaac atcgagcttg ggctgagccg cttcgatcga
     2581 gacctggtcg accgccgaac gttcgaactc cgcgaggaaa gaatagccgg acggcttatc
     2641 cttcaccacc gcggcataac cgaagcagat gtgaaccgcc gtcgtcccgc cgacgccggc
     2701 aagcgcgcgg tcgagcgcct tgagcccata tttgcgcgcc tcctccggcc gcgactgcat
     2761 ccaaggctcg tcgatctgca cgatatcggc accggcggcg aacagatcct tgatttcggc
     2821 gttgaccgcc gccgcgtagt cgagcgccag gcgttccccg tccccataga aatcgtcctg
     2881 gcactgcgcc gacatggtga agggccccgg caccgtcatc ttgatcgtcc gctccgtgtt
     2941 ggcgcgcagg aactccacgt cgcgcacctc gaccggatgc ttgcgccgaa tcggtcccac
     3001 tacccgcggc acggttgaaa acccgccggt tcgattggga gttttgcccg gattgtcgag
     3061 atcgataccc gcgagcgcgg tggcgaacct attggaatag ctctcgcgcc gctgctcgcc
     3121 gtcggtgatg atgtcgaggc ccgcgcgctc ctgatcgcga atggcaagca gcgtggcgtc
     3181 gtcctgggcg gcctcgagcc ggtccggatc gatgagccag agatcctgcg cgcgcacccg
     3241 cggcacttgt ttggaaagct tgccctggtc gatcagccag accggctggg gataggaacc
     3301 gaccaaagtg gttggcagga gcatcgcggt gacctctcgt gcccgcaccc ggcggcggga
     3361 acacgcggcg acggcgtcgc cttcggttaa aggttgatca cgtgtgaccg tgcttcgccg
     3421 atccctcgct cattacgctt gcactcatcg cccccacacc tcgccggcga catcgacgat
     3481 catccgcaat ttcgcccatt gctcctcctc ggcgaggaca ttgccttcct cggtcgaggc
     3541 gaagccgcat tgcggggata ggcagaactg ctcgagcgga gcgaacttgc ccgcttcatc
     3601 gatgcgccgc ttgacgtcgt ctttcttctc cagcgtgccg ctcttggagg tgacgaggcc
     3661 caacaccacg agcttgttgc ccttcggcaa gaaacgcagc ggctcgaatc caccggcccg
     3721 ctccgtgtcg tattcgagaa agtagccgtc gtagttcacc ttgcccagca acgtctccgc
     3781 caccggctcg taaccgccct cggaaatcca ggtcgaacgg aaattgccac ggcagacgtg
     3841 ggtggtgatg gtcatgtcgg cgggcttggc ttcgagcgcg gtattgatca cccgcgcgta
     3901 aatgccctgg agctgatcaa cgttcgacat ccgctcgcgc gccttgcgca gttcctcctg
     3961 cgagcagaga taggcccaga ccgtatcgtc gaattgcaga tagcgacagc cggcttggta
     4021 aaatgccttg atcgcttgtt gatacgcggt ggcgagatcg tggaagaatt gatcgagatc
     4081 gggatagacg ttcttcttaa tgccgtcctt gggaagacgg aaatgcagta ccggcggggc
     4141 ggggatggtc atcttcggcg tgaccttggt gtgggccttg agaaatttga agtgctcgag
     4201 catcggatgg tcggagaagc cgatcttgcc gacgatgcgc agcccttgcg ccttcgtttg
     4261 cacgccgcgg aattggatgc cctgctcggc ctcgtaaatt tcaacaccgt cgagcatgcc
     4321 gagaaaatcg aagtgccacc aggagcggcg aaactcgccg tcggtcgcca gctgaagccc
     4381 cagctcctcc tgcttcttga tgttgttctc gatctcgcgg tcctcgacgg ccttgagctc
     4441 ggccgcggtg atggcgccct tttcgcgttt ggcgcgtgcc tccctcagca ccgcggggcg
     4501 caagaagctg ccgacatgat cggcgcggaa cggcggcttg gtccttttca tcgctggaac
     4561 tcctcgggga caatctagcg cgcgtaaagc catggcggac aagccgccgt caacaataaa
     4621 acg
//
LOCUS       DATCWM010000134         4286 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_238653, whole genome shotgun sequence.
ACCESSION   DATCWM010000134 DATCWM010000000
VERSION     DATCWM010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4286
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_238653"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(164..1135)
                     /locus_tag="VIQ50_02455"
     CDS             complement(164..1135)
                     /locus_tag="VIQ50_02455"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9359268.1"
                     /translation="MKTFHVFAGILGALASLAAQLPAAAQADYPNKPLTMIVPFPAGG
                     RTDLVGRIVAQELTKHIGRPVAVVNKPGASSVLGAREVAESPPDGYTLGFFSTSAVTA
                     QYTVPTPIPLSNFELVAIVNTDPAAVAVQYGAAWKTLKDLVEDARKQPGKLRLGMIPG
                     ASAQIFAAGLENAAGIETIQVPFKGDTDGAIALAGGHIDIHVAVPVSYKSLEAAKKVR
                     MLAVADNARSPLYGNLPTFKDNGVDLVIGAFHGVYVPKGTPQTVIDKLADALAKTMES
                     QELRAGMDNAGAGIAFLRGTEAKTYLAKQDETYRAIIDKLGLRVSPK"
     gene            complement(1187..2401)
                     /locus_tag="VIQ50_02460"
     CDS             complement(1187..2401)
                     /locus_tag="VIQ50_02460"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEY9359269.1"
                     /translation="MTPKNRRVVIVGGGPVGLVSALALAQRDIPVLVLEAHPDLFMDL
                     RAGSFHPPTLEVLEASGVTKRLLEIGIVVPAWQLRDRAEGVIAVFELASLLKDETPYP
                     FRLHCEQHKLTPLVYDMLKRLPHVEMRFSSRVTEVSQDADNITVKAETLDGIETFTGA
                     WVIGADGGGSIVRKSANIGFEGFTYPEKFALISTPYDLGERGFTDTAYISHPIEWCAV
                     FRLPHKGPPGLWRFLYGCRADETDEEALEDDRVEERLQTVVPKAGRYETVHRTIYRVH
                     QRVATTFRAGRMLLAGDSAHLNNPLGGFGLNSALQDAINLTDKLVAVWRGEADDSLLD
                     RYVRQRRTANVEYVQESSIRNKRTLEEVDAVIRKQRLDELRRASEVPALAKEVVMKSS
                     MIASMRRANSIM"
     gene            2473..2979
                     /locus_tag="VIQ50_02465"
     CDS             2473..2979
                     /locus_tag="VIQ50_02465"
                     /inference="COORDINATES: protein motif:HMM:NF025268.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF255 domain-containing protein"
                     /protein_id="HEY9359270.1"
                     /translation="MVNGLAQERSAYLRQHWSNPVNWLPWGEAALSEAKTFNKPILLS
                     IGYSACHWCHVMARESFEDPEIAALMNQGFVNIKVDREERPDLDALYLKALQAGSQAW
                     VAAHDVSYPRRRALLGRNLFSARRAERAAVIPRSARVCRRRLPVGPAGRRTEGTRVDR
                     RPDEPPNE"
     gene            2960..>4286
                     /locus_tag="VIQ50_02470"
     CDS             2960..>4286
                     /locus_tag="VIQ50_02470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HEY9359271.1"
                     /translation="MSRPTNDQHRATITDESAQAAAAEVLEQIDRKNGGLEGAPKFPY
                     PAVFAFLWNQGLRSGRRDLCAAAGFTLERIAASGLHDHVGGGFFRYTVDAEWKIPHFE
                     KMLYDNALLVSLYSELYRREAGTLHRDLVRRTVEWLLGEMRVGDTAFASTLAAESEGR
                     EGAYYLLDPAEVASVLGDAAHEFRAQYLGSSADFEGGKVLNRFGEASRERNQASFLAH
                     CDRLLAARRRRPRPERDEKIVADWNGLAIAALVQAAVVFDEPRWLEAAGAAFAFVADA
                     MTVGDTLHHAWNGGQLGAPGVLDDYANMSLAALRLLEATGEAQYLQRAAAWTKSCIRH
                     FADPCGGFFHTADNVRHLVARIRDGHDGATPSGNGIMARVLSELFLSTGDTLYRRAAQ
                     ELFESFATDFERDGFLLASIIDAAQFNARAVQVTIIGRRHDPSTRALWQL"
BASE COUNT          797 a         1314 c         1352 g          823 t
ORIGIN      
        1 agcggcggtg atccaatcgt tctggatttc gttccacaag acttgaacgg cagccattgg
       61 accgaaaacc ccgtcagacg cgaaaagcgg cattggcgtc ggtgcatgct gcaagccaga
      121 cttgcgccgg gcgcaacaaa catcgcacct gagaggtgag ggtttatttc ggcgagactc
      181 gcaggcctaa cttgtcgatg attgcgcggt aggtctcgtc ctgcttcgca agataggtct
      241 ttgcttcggt gccgcgcaga aatgcgatgc cggcgccggc gttgtccatg ccggcgcgaa
      301 gttcctggga ctccatcgtc ttggcgagcg cgtcggctag tttgtcgatg accgtctgcg
      361 gggtcccctt ggggacatac acgccgtgaa acgcgccgat caccaaatcc acgccgttat
      421 ctttgaaggt ggggagattt ccgtacagcg gcgagcgggc gttgtcggcc accgccagca
      481 tccgcacctt ctttgccgcc tcaaggctct tataggacac cgggaccgcc acgtgaatgt
      541 cgatgtggcc gccggccaag gcgatggcgc catcggtatc gcccttgaaa ggcacctgaa
      601 tggtctcgat gcccgccgca ttctcgaggc cggcggcaaa aatctgcgcc gatgcaccgg
      661 gtatcatgcc gagccgcagc tttcccggtt gcttgcgggc gtcctcgacc agatccttta
      721 gcgtcttcca agccgcgcca tactggacgg ccaccgccgc gggatcggtg ttgacaatgg
      781 cgacgagttc gaaattggac aaaggaattg gcgtgggcac agtgtactgc gccgtaaccg
      841 ccgaggtcga aaagaaaccg agcgtgtacc cgtccggcgg agattcggct acttcacgcg
      901 cgccgagtac actgcttgcg ccgggcttgt ttacgaccgc taccgggcgg ccgatatgct
      961 tggtcagttc ctgcgcgaca atgcggccga cgaggtcggt tctgccgccc gccgggaaag
     1021 ggacgatcat cgtcagcggc ttgttcgggt agtccgcttg cgcggcggcg ggcaactggg
     1081 ccgcgagcga ggcgagggcg cccagaatgc ctgcgaagac gtgaaatgtc ttcatgccct
     1141 ttctccgtat acttcgatcg aagctcgatt gtcttctgac gccgtctcac atgatcgaat
     1201 tggcccgtcg catgctagcg atcattgacg atttcatgac aacctctttg gcgagggcag
     1261 gcacttcgga ggcgcgccgc aactcgtcca gcctttgctt gcggatgacc gcatcaactt
     1321 cttcgagcgt gcgtttgttg cggatcgacg attcctgcac gtattcgacg ttggcagtgc
     1381 gacgctggcg gacgtagcgg tcgagcagcg agtcgtcggc ttctccgcgc cagacggcaa
     1441 cgagcttgtc cgtgagattg atggcatcct gcagcgcgct gttgaggcca aagccgccga
     1501 gcggattgtt cagatgcgcg gaatcgccgg ccagcagcat gcggccggcg cggaacgtcg
     1561 tggcaacgcg ctgatggacc cggtagatcg tccgatgaac ggtttcatat cggcccgctt
     1621 ttggcactac cgtctgcaag cgctcttcta cgcgatcgtc ttcgagtgct tcttcatcgg
     1681 tctcgtcggc ccggcaaccg tacaggaacc gccacaagcc cggcggaccc ttgtgcggca
     1741 gacggaacac cgcgcaccat tcgatgggat gcgaaatata cgcggtatcc gtaaagcccc
     1801 gctcaccgag atcgtagggc gtgctgatca gcgcgaattt ttcaggatag gtgaaaccct
     1861 caaagccgat gttggcagac ttgcgcacga tgctgccgcc gccatcggcg ccgatcaccc
     1921 aagctccggt gaaagtctcg atgccatcaa gcgtttccgc cttcacggtt atattgtcgg
     1981 catcctgcga gacttcggtg acgcgggagg aaaaccgcat ctcgacatgc ggcaagcgtt
     2041 tgagcatgtc gtagacgagc ggcgtaagct tatgctgctc gcaatgaagg cgaaacggat
     2101 agggtgtttc gtcctttagc aacgaggcga gctcgaaaac ggcgatcact ccctcagcgc
     2161 ggtcgcgcag ctgccaggcg ggaacgacaa tgccgatctc cagcaacctt ttggtgacgc
     2221 cgctggcctc aaggacttca agggtcggtg ggtgaaacga tcccgcccgc aaatccatga
     2281 acaggtctgg atgcgcctcg agcaccagaa ccggaatgtc gcgctgggcg agtgccagcg
     2341 cggacaccag ccccactgga ccgccgccaa cgatgacgac ccgccgattt tttggcgtca
     2401 cgctgcactc cgtgcgtaag gcggcgaagc ccccgccttg tccctcaaga tgaatacagt
     2461 gtacagtctc gcatggtcaa cggtttggct caagagcgca gcgcctacct gcgccagcat
     2521 tggagcaacc cggtgaactg gctgccatgg ggcgaggcgg ccttgagcga ggcaaagacc
     2581 ttcaacaaac cgatcctgct gagcatcggc tactcggcct gccattggtg ccatgtgatg
     2641 gcccgcgaga gcttcgagga tcccgagatc gccgcgttga tgaaccaagg cttcgtcaac
     2701 atcaaagtgg atcgcgaaga gcggcccgat ctcgacgcgc tctacctcaa ggcgctgcaa
     2761 gcagggtcgc aggcctgggt ggccgctcac gatgtttctt acccccgacg gcgtgccctt
     2821 ctggggagga acttattttc cgcacgaagg gcagaacggg ctgccgtcat tccgcgaagt
     2881 gctcgagtat gtcggcgacg cctaccggtc ggacccgcag ggcgtcgcac agaagggacg
     2941 cgcgttgatc gacggcctga tgagccgccc aacgaatgat caacaccgcg cgacgatcac
     3001 cgacgaaagt gcgcaggcgg ctgcggccga ggtgctcgag caaatcgatc ggaaaaacgg
     3061 tgggctcgaa ggggcgccga agtttcccta tcctgccgtg ttcgcgttcc tctggaatca
     3121 gggcttgcgt tcgggccggc gcgacctttg cgcggccgcc ggcttcacgc tggagaggat
     3181 cgccgcgagc ggacttcacg accacgtggg cggcgggttt tttcgctaca ccgtggatgc
     3241 cgagtggaag atcccgcatt tcgaaaaaat gctttacgac aatgccctgc tggtgtcgct
     3301 ctattccgaa ctttatcgca gggaagccgg cacactccac cgcgatctcg tgcggcgcac
     3361 ggtcgaatgg ctgctcggcg agatgcgcgt cggcgatacc gcctttgcct ccacccttgc
     3421 ggcggaaagc gaggggcgcg agggcgccta ttatctgctc gatcctgccg aggtggcgtc
     3481 agtcctggga gacgcggcac acgaatttcg agcgcaatac ctgggttcca gcgcggattt
     3541 cgagggcggc aaagttctca accggtttgg cgaagcatcg cgcgagcgca atcaagcgtc
     3601 tttccttgcg cattgcgatc ggctgcttgc ggcccggcga cggcggccgc gtcccgagcg
     3661 cgacgagaag atcgtcgccg actggaacgg tcttgccatc gccgcccttg tgcaagccgc
     3721 cgtggtgttc gatgaaccgc gatggctcga ggcggcaggg gctgcgttcg ccttcgtggc
     3781 ggacgcgatg accgtgggcg acacccttca tcacgcgtgg aacggaggtc aactcggcgc
     3841 gcccggggtc ctggacgact atgcgaacat gagtctcgct gcgctgaggc tgctcgaagc
     3901 aacgggcgag gcgcaatacc tgcaacgagc cgcggcctgg acgaagtcct gcatcagaca
     3961 tttcgccgac ccgtgcggcg gcttttttca taccgccgac aacgttcggc acctcgtcgc
     4021 gcgcatccgc gatgggcatg acggtgctac gccctccggc aacggtatca tggcgcgcgt
     4081 gctctcggag cttttcctgt cgacgggtga cacgctttac cgacgggccg cacaggaact
     4141 gttcgagtcg ttcgcgaccg atttcgaacg ggatggcttc ctgctcgcga gcatcatcga
     4201 tgccgcgcag ttcaacgctc gggcagttca agtgacgatc atcggccgcc gccacgatcc
     4261 ctccacgcgg gcgctatggc agctcg
//
LOCUS       DATCWM010000135         3506 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_222409, whole genome shotgun sequence.
ACCESSION   DATCWM010000135 DATCWM010000000
VERSION     DATCWM010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3506
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_222409"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            40..222
                     /locus_tag="VIQ50_02475"
     CDS             40..222
                     /locus_tag="VIQ50_02475"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
                     /protein_id="HEY9359272.1"
                     /translation="MDRERLLGVYTGRVLKGEKPADLLILRAVKFEFVINLQTAKTIG
                     LEVPPTLLGRADEVIE"
     gene            295..1251
                     /locus_tag="VIQ50_02480"
     CDS             295..1251
                     /locus_tag="VIQ50_02480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-alpha-hydroxyglycine alpha-amidating
                     lyase family protein"
                     /protein_id="HEY9359273.1"
                     /translation="MATVGNGAYTYEPVEDWAKLPPGWSFKEIGGVGVDRHDNVFVFN
                     RGEHPMIVFDCAGNFLRSFGEGMFPRAHGVFMAPDDTIWLTDDGDHTVRQCTLEGKVL
                     LTLGISGKPAPFMSGEPFHRCTHTAMSPQGDIYVSDGYGNSRVHKYAPNGKLLLSWGG
                     PGTDPGEFNIAHNITCDADGWVYVADRENHRVQVFDGNGKYETQWNNLHRPCGLFMPP
                     GKYPVCYIGELGAVQPVSRNVPNLGPRITIVDNTGKRISRLGGLGPGLGPTEFLAPHG
                     LAVDSNGDLYVGEVSWTNWPQTYRDKPRPDNLRSLHKFRKLA"
     gene            1390..1713
                     /locus_tag="VIQ50_02485"
     CDS             1390..1713
                     /locus_tag="VIQ50_02485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359274.1"
                     /translation="MLVHFRETPYGLAMSLVETHRENRRVRHEHIASLGSIEMPPSVA
                     ARIEFWRGLHERLDQLSNRLDAETRGKVMGAVHARVPMVTPDEQRALQLEDAKGDAEQ
                     RPPVS"
     gene            1953..2939
                     /locus_tag="VIQ50_02490"
     CDS             1953..2939
                     /locus_tag="VIQ50_02490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9359275.1"
                     /translation="MTSYFERRKFLATLGGAVAWPLAAQAQSYPSRPITIVVPFPAGG
                     PTDALARVLADRMKGALGQSVIVENPTGAAGTIGTGRVARAAPDGYTVILGHWQTHVV
                     NGATYALPYDLVEDFTPISLVADCPVWFVGKATLPPKNLEELIAWMKDNPGKATVGIG
                     GVGGGADVVGTYFQKNTGTRFQFVPYRGAAPMIQDLVAGQIDLTFTQVASALAQVRAG
                     QLKAYGVMAKGRWPATPDTPTFDEAGVPGLHASFWHGLWAPKGTPKDVIASLHAAVVE
                     TLADPSVRQRLADLGQGIWPREQQTPEALAAQQKAEIEKWWPIIKAANIKAE"
     gene            3000..>3506
                     /locus_tag="VIQ50_02495"
     CDS             3000..>3506
                     /locus_tag="VIQ50_02495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012047570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9359276.1"
                     /translation="MHLAASAAALPAASRFAFAQDYPTRPVRLIVGFAPGGTTDITAR
                     LMGQWLSERLGQQFVIENRTGAATNIATEAVVRAPADGYTLLLVTASNAINATLYDKL
                     SYNFIRDIAPVAGIIRYPLVMQVNLSFPAKTVPEFISYVKSNPGKISYGSGGIGTSIH
                     VASELFKMM"
BASE COUNT          682 a         1106 c         1093 g          625 t
ORIGIN      
        1 tgttgaagct ggcgggctga cgagctacgg tcgagcatca tggatcggga gcgcctgctc
       61 ggcgtttaca ccggccgcgt tcttaaaggc gagaagccgg ccgacctgct gattctgcgg
      121 gcagtgaagt tcgagttcgt catcaaccta cagacagcca agacgatcgg tctcgaagtg
      181 ccgccgacgc tgctcggccg tgccgacgag gtgatcgaat aatgtgaagg tagagggagg
      241 gttcgaatgc ttcgtgacaa gcttccgacc ggcaacgaac agggaagcgc gggcatggct
      301 accgtcggca acggcgcata cacctacgaa cccgtggagg actgggcaaa actcccgccc
      361 ggctggtcat ttaaggaaat cggcggcgtc ggcgtggacc ggcacgacaa cgtctttgtc
      421 ttcaatcggg gcgagcatcc gatgatcgtg ttcgactgcg cgggcaattt cctgcgctca
      481 ttcggagaag gtatgtttcc ccgtgcccac ggcgtcttca tggcgcccga cgacacgatc
      541 tggctcaccg acgatggcga tcacaccgtc cgccagtgca cgctggaagg aaaggtgctg
      601 ctgacgctgg gcatttccgg caagccggca cccttcatga gcggggagcc gtttcatcgc
      661 tgcacccaca ccgcaatgtc tccgcagggc gacatctatg tgtccgacgg ctatggcaat
      721 tcgcgcgtgc acaaatacgc gccgaacggc aagctgctcc tctcctgggg cgggcccggc
      781 accgatccgg gcgagttcaa catcgcgcac aacatcacct gcgatgccga cggctgggtg
      841 tatgtggccg atcgcgagaa ccatcgcgtc caggtgttcg acggcaacgg gaagtacgag
      901 acgcagtgga acaacctgca ccgtccctgc ggcctgttca tgccacccgg caagtacccg
      961 gtctgctaca tcggcgaact cggcgctgtg caaccggtga gccgcaatgt gccgaacctt
     1021 ggcccgcgca tcaccattgt cgacaacacg gggaagcgca tttcccgact aggcgggctt
     1081 ggcccaggcc ttggtccaac cgagttcttg gcaccgcatg ggcttgcagt ggacagcaac
     1141 ggcgaccttt atgtcggcga ggtatcgtgg accaactggc cgcaaaccta cagagacaag
     1201 ccgcgtccgg ataatctgcg ctccctgcac aagttccgga aactggcata ggctcgacat
     1261 tcccgcggcc gtactcgccc gcgctgacga ggtaatcgag tgaaacgccg ttcgccaaga
     1321 gccggcggga gcagcgaaga gaggtcgcgc ctcgctggga aggaacctgg cgggtatcgt
     1381 gccactacaa tgctcgtgca ctttcgcgag acgccctacg ggctggcaat gagcttggtc
     1441 gaaacccacc gggagaaccg cagggtccgc cacgagcata tcgcgagctt gggctcgatc
     1501 gagatgccgc catcggttgc cgcacgcatt gagttctggc gcggattgca cgagcggctg
     1561 gaccagctct ccaaccggct cgacgccgag acacggggca aggtcatggg ggcggtgcat
     1621 gctcgggtcc ctatggtcac gccagacgag caacgcgcat tgcagctcga agacgcgaag
     1681 ggggatgccg agcaacggcc accggtttct tgaacctgac gacttagccg gaggcattgt
     1741 cgtcgtaccg ccctcgcgcc gaagttcgtc cagctatgtc cgctctacgg gcaaaccgga
     1801 cattgagccg atatcgccga actgtctgag ctgacccccc accgttcatt cgaagcattc
     1861 actcgacttg cctatcggcc ttagtaacta ccgcgatgga aacgtggtat catccctcca
     1921 ttgcatgaat gacccccaac cggagggtca ccatgacaag ctactttgaa cggcgaaaat
     1981 tcttagccac gcttggcggc gcggttgcct ggccgctcgc ggcgcaggca cagtcctatc
     2041 cgtcgcgacc catcaccatt gtcgtgccgt tcccggcggg cgggccgacc gacgcgcttg
     2101 cgcgcgtgct cgcggatcgg atgaaggggg cactcggcca atcggtcatc gtcgaaaacc
     2161 cgacgggggc cgcgggcacc atcggcaccg gccgcgtcgc gcgtgccgcg cccgatggct
     2221 atacggtcat cctcggccac tggcagacgc atgttgtcaa cggcgcgacc tacgcgcttc
     2281 cgtacgactt ggtagaggat ttcacgccga tatcactggt ggcggactgt cctgtgtggt
     2341 tcgtcgggaa agctactttg ccgccgaaga atctggagga gctcatcgct tggatgaaag
     2401 acaacccggg caaggcgacc gtgggaatcg gcggcgtcgg cggcggcgcg gatgtcgtcg
     2461 ggacttactt ccaaaagaat accggcaccc gattccagtt cgtgccctac cgcggtgccg
     2521 cgccgatgat ccaggatttg gtggcggggc agatcgacct gaccttcacc caggtggcga
     2581 gtgcgctggc gcaagtccgc gccggtcagc tcaaggctta tggcgtgatg gctaaggggc
     2641 gttggccggc gacgcccgat acgccgacgt tcgacgaagc aggggtcccc gggcttcacg
     2701 cgtcgttctg gcacgggcta tgggcgccca aaggcacccc gaaggatgtc atcgccagcc
     2761 ttcatgccgc ggtcgtggag actttggccg atccgtcggt acgccagcgg ctcgccgact
     2821 tgggccaggg aatctggccg cgcgagcaac agacgcccga ggcgctcgcc gcccagcaaa
     2881 aggccgagat cgagaagtgg tggccgatca tcaaggcggc gaacatcaag gcggaatgaa
     2941 gtggcttggt tgcctgcatt tcagagagta atgccgtgaa acttccccgc cgtcgatttc
     3001 tgcatctggc agcgagcgct gccgcgctgc cggccgcctc gcgttttgct ttcgcgcaag
     3061 actatccgac gcgaccggtg cgcttgattg tcggctttgc ccccggcggc accactgaca
     3121 tcaccgcacg cctgatgggc caatggctgt cagaacggct cggccagcaa ttcgtcatcg
     3181 aaaatcggac cggggcagcc accaatatcg ccaccgaagc cgtcgtgcgc gcgcccgcgg
     3241 acggttacac gctgctcctc gtcacggcct cgaacgcgat caacgccacg ctctacgaca
     3301 agctcagcta caatttcatc cgcgacatcg caccggtcgc gggcatcatc cgctaccccc
     3361 ttgtcatgca ggtaaatcta tcgttcccgg cgaagacggt tcccgagttc atcagctatg
     3421 tgaagtccaa tcccggcaag atcagctatg gatcgggcgg catcggcacg tcgatccatg
     3481 tcgccagcga actgttcaaa atgatg
//
LOCUS       DATCWM010000136         3489 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_486930, whole genome shotgun sequence.
ACCESSION   DATCWM010000136 DATCWM010000000
VERSION     DATCWM010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3489)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3489)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3489
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_486930"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..802)
                     /locus_tag="VIQ50_02500"
     CDS             complement(<1..802)
                     /locus_tag="VIQ50_02500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009398884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY9359277.1"
                     /translation="MAKISAGDGVKLHVETVGSGTPVVFVHEYAGDYRSWEPQMRHFC
                     RRHRCVTYSQRGYPPSDVPSDPARYSQDIARDDVIAVMDALGIDKAHVVGHSMGGYTA
                     LHVGIRYPRRCLSVTAAGCGWGSSADAGKREAMKAMATETGKMFADEGIVSAAAKYAD
                     APMRQAFKNKDPRGWSEFARMLSEHSAEGHAHTMLNLQLKRPTLWEMEGELKQFSVPL
                     LVIVGDEDDLCLDGSLFIKRTAPTAALLVVPRAGHTINSEEPAMVNAAL"
     gene            complement(918..1760)
                     /locus_tag="VIQ50_02505"
     CDS             complement(918..1760)
                     /locus_tag="VIQ50_02505"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEY9359278.1"
                     /translation="MKIVDMSHVMNVHTPGWVGYAGNKMYYAQNLQTQMIVAQRIDTA
                     LHVGTHFDGAMHATDDPKGDMASLPLDYLVNCGVVVDISSRMSDWAVITPEIIESAGA
                     DIRDGDILLLHTGWHRHYEGQPQQDLVKYFCYHPGPNLDTLHWMLKRKIKWWGMDTGS
                     CDHAMNTSIRAMRPDLAAQFTKLHGKTPGEFFGTFEYIHRKSGRRVTSDVFPFHNWAF
                     QEGLLHAENLGGDIELMLNKRALIGAFPWRYEGLEGCPCRIVAFLDTGDQVEAVGNAA
                     KAIM"
     gene            1970..2566
                     /locus_tag="VIQ50_02510"
     CDS             1970..2566
                     /locus_tag="VIQ50_02510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359279.1"
                     /translation="MKIQTILALALASLVFGCGGQLSSDEAGLMDAVAFVTGGQQEDA
                     IPQGFETRWRRTVRGREIEYQSIGPYAGFGQANDPHRDSRHVRIGVTITSPKKCVFKT
                     VVTTEYSKGESKGSFGAATSEATTLDLNKVRRLDVEEGDSANVVIEGTAWMCKEGGCQ
                     DNVKIAISAPREEALARTIQSKRHAIDFIRKACPGLPR"
     gene            complement(2683..3447)
                     /locus_tag="VIQ50_02515"
     CDS             complement(2683..3447)
                     /locus_tag="VIQ50_02515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FCD domain-containing protein"
                     /protein_id="HEY9359280.1"
                     /translation="MTETGEKFDRINAIPAYQLVADAIEREILARRIRPGEPIGTEAQ
                     LVKQFGVNRSTVREGIRLLEQSGLIHRDSGRRLTASLPHYSRLATRMSRAMLLHEVTF
                     RELWEATTALEIATVEQAAAHATADVIAELQANVASTEQASADPAAVAELDTQFHSLI
                     AKASQNRVLQLAREPSSLLIFPTTEIILRKLKEGVPRLIQAHRKIVDAVSRHDKEASR
                     LWMLRHANDWRRGFERAGKDVDQPIDRVYMKEVMTR"
BASE COUNT          620 a         1072 c         1109 g          688 t
ORIGIN      
        1 cgagcgctgc gttcaccatc gccggttcct cactgttgat ggtgtggccc gcacgcggca
       61 ccaccagaag cgcggcggtc ggagccgtgc gtttgatgaa taggctgccg tcgagacaga
      121 gatcgtcctc gtcgccgacg atcaccagca gcggcaccga gaactgcttg agctcgccct
      181 ccatctccca cagcgtcggc cgcttgagct ggaggttgag catggtgtgg gcgtgaccct
      241 ccgccgagtg ctccgacagc atgcgcgcga actcgctcca gccgcgtgga tctttattct
      301 tgaacgcctg gcgcatcggc gcatcggcgt atttggcggc ggcggaaacg atgccttcgt
      361 cggcgaacat ctttccggtc tccgttgcca tcgccttcat ggcctcgcgc ttgcccgcgt
      421 ccgcgctcga gccccagccg cagccggcgg cggtcacgga gaggcagcgg cgcggatagc
      481 ggatgccgac gtgcagcgcg gtgtagccgc ccatcgagtg cccgaccacg tgggccttgt
      541 cgatgccgag cgcgtccatc acggcgatca cgtcgtcgcg ggcgatgtcc tgggagtagc
      601 gggcggggtc ggagggcacg tccgatggcg gatatccgcg ctgactatag gtgacgcagc
      661 ggtgccggcg gcaaaagtga cgcatctgcg gttcccagct gcggtagtcg ccggcatatt
      721 catgcacgaa cacgaccggc gttccggagc cgaccgtctc gacgtgaagc ttgaccccat
      781 cccctgcgga aattttcgcc attgcgggct tttcgaatgc gccggagcgc gatgcaactt
      841 cgtttgcgta ggaacaaaat gctagtcggg acattgcgcg cccgcaagct gcgcaaagcc
      901 cgcgtcggat ctcagcccta catgatcgcc ttcgccgcgt tgcccaccgc ctcgacctgg
      961 tcgccggtat cgagaaaggc gacgatgcgg caggggcagc cttcgagacc ttcgtatcgc
     1021 caggggaatg cgccgatcag cgcgcgcttg ttgagcatga gctcgatgtc gccgccgagg
     1081 ttctcggcgt gcagcagccc ctcctggaag gcccagttgt gaaatggaaa aacgtcggac
     1141 gtgacccggc gtccggattt cctgtggatg tattcgaagg tgccgaagaa ctcgcccgga
     1201 gtcttgccgt gcagcttggt gaattgcgcg gcgagatccg gccgcatggc gcggatcgag
     1261 gtgttcatgg cgtgatcgca cgatcccgta tccatgcccc accacttgat ctttcttttc
     1321 agcatccaat gcagggtgtc gagattgggg ccggggtgat agcagaagta tttcacgaga
     1381 tcctgctgcg gttgaccctc gtaatggcga tgccagcccg tgtgcagaag caggatgtcg
     1441 ccgtcgcgga tatcggcgcc ggcgctctcg atgatctccg gcgtgatcac ggcccagtcc
     1501 gacatccgcg atgaaatgtc caccacgacg ccgcaattga ccaggtaatc gagcggcagc
     1561 gaggccatgt cgcccttggg gtcgtcggtg gcgtgcatgg cgccgtcgaa atgcgtgccg
     1621 acgtgaagcg ccgtgtcgat gcgctgcgca acgatcatct gcgtctgcag attctgcgcg
     1681 taatacattt tgttgccggc atatccgacc catccggggg tatgcacgtt catcacgtgg
     1741 ctcatgtcga cgattttcat cgcttgcccc ttcgctctcg ctcgactatc agcttcatac
     1801 catcacagat tccgactcct cgcacgcggt ccgcccgcgt tgtggcaaat tcggcgcacc
     1861 ctctcccggt gcctccgcgg aaaggctaag gtgaagcgct ttcgatcgat agcgtcgcgt
     1921 agatcgacga cggcatgagc acgcgtgctg ccccgcttgg gagagaaact tgaagattca
     1981 aaccattctg gcgctggcat tggcaagcct ggttttcgga tgcgggggcc aactcagctc
     2041 agacgaagca gggctgatgg atgcggtcgc attcgtcacc ggcggccagc aggaggatgc
     2101 gatcccgcaa ggatttgaaa cccgctggcg gcgcaccgtt cgcggacgag agatcgagta
     2161 ccaatcaatt gggccatatg cgggcttcgg ccaagccaat gatccgcatc gcgacagccg
     2221 ccacgtgcgg atcggcgtga ctatcacttc accaaaaaaa tgcgtgttca agacagtcgt
     2281 aacgaccgag tactcgaagg gcgagagcaa aggaagcttc ggcgctgcga ccagtgaagc
     2341 tactacgttg gatctgaata aggtgcgccg gcttgatgtc gaggaaggcg attctgcgaa
     2401 tgtggtgatc gagggcacgg cctggatgtg caaggaaggc ggatgtcaag acaacgtcaa
     2461 gatcgcgatt tcggcacccc gcgaggaagc actggcgcgc acgatccaaa gcaagcggca
     2521 cgctattgac ttcattcgga aggcctgccc gggactgcct cgctagcgag agcgtttttc
     2581 ggcgaagcgg ctacgccgaa tatgacgcgt tgcgactttg cttatgtgcc gcgaacgatc
     2641 ctgctcggtc tctgctaaaa aaccgcgcgc ttacgttcgt gctcagcgcg tcatcacctc
     2701 tttcatgtag acgcggtcga tcggctgatc gacatccttg ccggcgcgct cgaaacctcg
     2761 gcgccagtcg ttggcgtggc ggagcatcca cagccggctt gcttccttgt cgtgccgact
     2821 gaccgcatcg acgatcttgc gatgcgcttg aatgaggcgc ggcacgccct ccttcagctt
     2881 gcgcaatatg atctcggtgg tcggaaagat gagcagactc gagggttcgc gcgcgagctg
     2941 aagcacccgg ttctgcgacg ccttggcgat cagggaatgg aactgggtgt ccaattcggc
     3001 gacggcggcc ggatccgcgg atgcctgctc ggtgctggcc acattcgcct ggagttcggc
     3061 gatgacgtcc gccgtcgcat gcgcggccgc ctgctccacg gttgcgatct cgagcgcggt
     3121 cgtcgcctcc caaagctccc ggaacgtgac ctcgtgcagc agcatcgcgc ggctcatgcg
     3181 ggtggcgagg cgactgtagt gcggaaggct ggccgtcagc cggcggcctg aatcgcggtg
     3241 gatcaggccg ctctgctcca agaggcggat gccttcgcgc accgtcgacc ggttcacgcc
     3301 gaactgtttg acgagctgag cctcggtgcc gatcggttcg cccggccgga tccggcgcgc
     3361 cagaatctcg cgctcgatcg cgtcggcgac cagctggtac gcgggtatcg cattgattcg
     3421 atcgaatttt tcgcctgttt ccgtcatacg gcgattctcg cttccagccg attctcacct
     3481 actccgatc
//
LOCUS       DATCWM010000137         4914 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_535569, whole genome shotgun sequence.
ACCESSION   DATCWM010000137 DATCWM010000000
VERSION     DATCWM010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4914)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4914)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4914
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_535569"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(46..2430)
                     /locus_tag="VIQ50_02520"
     CDS             complement(46..2430)
                     /locus_tag="VIQ50_02520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008134793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEY9359281.1"
                     /translation="MHSSVHNDQGIGVPLRRVEDRRFLTGRGRFVADVELSGALACAL
                     VRSPHAHAAIRRIDISAALASSGVVAVLTGADMAADGMAPMRPLWVIRSREGSPMAEP
                     PRFALAREKVRHVGEPVAAVIAETPTQALDAAERVEVGYEPLAAVTDARAAQAAHAPQ
                     LHVCAPGNVCFRWTRGDEAAVRAAFGSASHVVAIDLVNNRLVGAALEPRAALAEPQSE
                     KLTLYTSTQAPHHIRRQVTEQLGISESALRVISPDVGGGFGYKGKLYPEEGIIAWAAR
                     RLRRPVRWVASRAESFVADNQGRDHLTHAELALDADGRFLALNVETFANLGAYVSTFG
                     AAIPSAIYSALLAGGYLTPAILVQVTGVFSNTTPTDAFRGAGRPEACYVLERLADRAA
                     RQLGIDRAEIRRRNLIPPSAMPYRTPIGPTYDCGDFPKILARALALADYENFEKRRMQ
                     GEQRGRLRGIGMACYVESSGVAPSRFAGALGARVGFYEAASIRVEPDGAVRAMLGTHN
                     HGQGHATTFAQILSARLGVPVEKIEVIEGDTDTVPHGTGTFGSRSIAVGGCALDRAAD
                     KIIAKGKLIAAHLLEAAAGDVDFRDGAFVIAGTDRRVSFAAVAQAAYVPHNFPLETLE
                     PGLQETAVYDPPSFAFSNGAHVCEVEIDPETGRLEILGFWAVDDIGTVINPMIVEAQI
                     HGGLAQGLGQALLERCAYDDGGQPLCGSFMDYALARADDLPAFVTECDESQPCTHNPL
                     GAKGCGEAGAIGAPAAVISAALDALDPLGITDLDMPLTSEQVWRRIRQARQKSP"
     gene            complement(2523..3551)
                     /locus_tag="VIQ50_02525"
     CDS             complement(2523..3551)
                     /locus_tag="VIQ50_02525"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY9359282.1"
                     /translation="MVEAETRKAGSAFVSELEAKHLHPLWDRYQRITPMQPQAPDAPF
                     IWRWRDVEPMLHRSVVEVSINDIERRALIMAHPAFGAETTTTSTLLAAFTVLDPGERA
                     RPHRHTGAAIRFATRAEGAVTIVDGRRCEMKAGDLILTPPMVWHGHINESDQRIIWFD
                     AANMPLIRGLDAHFFEPGDPRNNQFWQVDAGDESLWADAGLRAQGAAANAAHSPKYRY
                     PGEATRRLIAVAPIGVEGMRVVRYVDPATGGPVMPTLDCYAARLDKGAATRRKRATYN
                     VVCLVIAGEGRSSVGEATFEWSQHDVFTIPHWTWARHQARGGHADLFMVTDRSAFERL
                     DLVREEMD"
     gene            complement(3646..4581)
                     /locus_tag="VIQ50_02530"
     CDS             complement(3646..4581)
                     /locus_tag="VIQ50_02530"
                     /inference="COORDINATES: protein motif:HMM:NF024799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEY9359283.1"
                     /translation="MFKARMAALAAALIIPAALAVAWAATAQQNITIGVSLAQDDNPF
                     YIAMLRGIRARAQELGWDVATVSANEDKLKQINGVQDLIARGVKGILISPIDAVGVNA
                     AYDAAAAAKVPIVSVARGSASPNQTIHVAMDEKQIGRDIAEWTARRLGGKGKVALLMG
                     PSGAPTFRNLGEGFSEIMAKYPGIEIVSRADGPLTRERGVKQAEDVLVAHPDLAAIYT
                     ANDDVALGAMQAVNAANRKGKTLVTGMNGVPPALRAVKEENLAMTVELNPAEWGRLGV
                     DVLAAFLKGDKVETRVFIKHVIIDGSNVDAKLPKT"
     gene            complement(4675..>4914)
                     /locus_tag="VIQ50_02535"
     CDS             complement(4675..>4914)
                     /locus_tag="VIQ50_02535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9359284.1"
                     /translation="AGEFYELTAIAAVVLGGASLQGGEGTLYKSVIGVFIMIVLGNAL
                     NLLNVDSYWQRVAVGAVIIAAAAAERLRSHTASGQ"
BASE COUNT          793 a         1649 c         1632 g          840 t
ORIGIN      
        1 ggccgccaac agcacaccat cctgatgcca tccggcccga tggtctcaag gcgatttctg
       61 ccgcgcctgc cggattcggc gccacacctg ctccgatgta agcggcatgt cgaggtcggt
      121 gatgccgagc ggatcgagcg catcgagcgc cgcgctgatc actgcggcgg gcgcgccgat
      181 ggcgcccgct tccccgcagc ccttggcacc gagcgggttg tgggtgcagg gttggctttc
      241 gtcgcactcc gtcacgaagg cgggtagatc gtccgcccgc gccagcgcat agtccatgaa
      301 cgacccgcac agcggctgac cgccgtcgtc ataggcgcac cgctcgagca gcgcctggcc
      361 gaggccctgg gcgaggccgc cgtggatctg cgcttcgaca atcatcggat taatgacggt
      421 gccgatgtca tcgaccgccc agaaaccaag gatctcgagc cggccggtct ccggatcgat
      481 ctcgacctcg caaacatgcg ccccgttgct gaaggcgaag ctcggcggat cgtagacagc
      541 cgtctcctgc aagccgggct ccagcgtctc gagcggaaag ttgtgcggca cgtaggccgc
      601 ctgcgcaact gccgcgaagg atacccgtcg gtcggtgccg gcgatgacga atgcgccgtc
      661 gcggaaatcg acgtcgcccg cggccgcctc gagcagatgc gccgcgatca acttgccctt
      721 ggcaatgatc ttgtcggcgg cgcgatcgag cgcgcatcca ccgaccgcga tcgagcgcga
      781 gccgaaggtg ccggtgccgt gcggcaccgt gtccgtatcg ccctcgatca cctcgatctt
      841 ctcgaccggc acgcccaacc ttgccgagag gatctgagca aaggtggtgg cgtgaccttg
      901 gccgtgattg tgggtgccca gcatcgcccg cacggcgcca tcgggctcga cgcggatgga
      961 tgcagcttca tagaagccga cgcgggcacc gagtgcgccg gcaaatcgcg acggcgcgac
     1021 ccccgaggac tcgacgtagc atgccatgcc gatgccgcgc agccgtccgc gctgctcgcc
     1081 ttgcatgcgg cgcttctcga aattctcgta gtcggcgagc gcgagcgcgc gggcgaggat
     1141 tttcggaaaa tcgccgcagt cgtaggtggg cccgatcggt gtcctgtagg gcatggcgct
     1201 gggcggtatg aggttgcgcc ggcggatttc cgcccgatcg atgccgagtt gccgcgctgc
     1261 gcgatcggca agccgttcca ggacataaca agcctccggc ctgccggcgc cgcgaaaggc
     1321 gtcggtcgga gtggtgttgc tgaacacgcc ggtgacctgc acgaggatcg caggggtgag
     1381 gtagcccccc gccaacagcg cgctgtagat cgcgctcgga atggcggcgc caaaagtaga
     1441 gacgtaggcg ccgaggttgg cgaaggtctc gacattgagc gcgaggaacc gcccgtcggc
     1501 atcgagtgcg agttccgcat gggtgaggtg atcgcggccc tgattgtcgg ccacgaagct
     1561 ttccgctctg cttgcgaccc agcgcacggg acggcgcagg cgtcgcgcgg cccaggcaat
     1621 gatcccctct tccggataaa gcttgccctt gtagccgaag ccgccgccca cgtcgggcga
     1681 aatgacgcgc agcgcgctct cagaaatgcc gagctgctcg gtgacctggc ggcggatgtg
     1741 atggggagcc tgcgtggagg tgtagagcgt gagtttttcg ctctgcggtt cggcgagcgc
     1801 cgcgcgcggt tcgagcgccg cgccgaccag acggttgttg acgagatcga tcgcgaccac
     1861 gtgggacgcg ctgccgaacg ccgcacgcac ggccgcttcg tcgccgcgtg tccagcgaaa
     1921 gcaaacgttg ccgggagcgc agacgtggag ctgcggcgcg tgcgctgcct gcgccgcacg
     1981 cgcatcggtg acggcggcga gaggctcgta gcccacctcg acacgctcgg ccgcgtcgag
     2041 cgcctgcgtg ggggtttcgg cgatgacggc cgcgaccggc tctccgacgt ggcggacctt
     2101 ctcgcgcgcc agcgcaaagc gcggcggctc ggccatgggc gagccctccc gcgatcggat
     2161 cacccacagc ggccgcatcg gcgccattcc gtcggctgcc atatccgcgc cggtaagtac
     2221 cgcgacgacg ccggacgagg cgagcgcagc cgatatgtcg atccggcgaa tggccgcatg
     2281 cgcgtgcggc gagcgaacga gggcgcaggc gagcgcaccc gagagctcga catcggccac
     2341 gaaacgtccc cggccggtca gaaagcgccg gtcctcgacg cggcgcagcg ggacgccaat
     2401 gccttgatcg ttgtgcacgc tagaatgcat cgtgctgttt gccaggatgg gattgcgcgc
     2461 tgtcgatctt gtgactcgcg tcgcgtccgg cgcctgcgct gattccaacc acgcactgag
     2521 ctctaatcca tttcctcccg caccaggtcg agccgctcga acgccgacct atccgtcacc
     2581 atgaagaggt cggcgtggcc gccgcgcgcc tggtggcgtg cccacgtcca gtgcgggatg
     2641 gtaaagacgt catgctgcga ccattcgaac gttgcctcgc caacgctcga gcgcccctcg
     2701 cccgcgatca caagacaaac cacgttgtaa gtcgcgcgtt tcctgcgcgt ggcggccccc
     2761 ttgtccaagc gggcggcata gcagtcgagc gtcggcatga cggggccgcc ggttgcaggg
     2821 tcgacgtagc ggaccacgcg cataccctcc acgccgatgg gcgcgacggc gatgagccgg
     2881 cgcgtcgcct cgccgggata gcggtatttc ggcgagtgtg ccgcgtttgc cgccgcacct
     2941 tgcgcgcgca ggcccgcgtc ggcccacaag ctctcgtccc ctgcgtccac ctgccagaac
     3001 tggttattgc gcgggtctcc cggctcgaag aagtgcgcgt cgagtccgcg gatcagcggc
     3061 atgttggcgg cgtcgaacca gatgatgcgc tgatcgcttt cgttgatatg gccgtgccag
     3121 accatcggcg gggtcaggat caagtcgccg gccttcatct cgcagcgccg cccgtcgacg
     3181 atggtgaccg cgccttccgc gcgcgtggcg aaacggatcg cggcgccggt gtggcgatgc
     3241 ggccgggcgc gctcgccggg atcgagcacg gtgaaggcag cgagcaacgt gctcgtcgtg
     3301 gtcgtttccg ctccgaacgc cggatgcgcc atgatcaacg cgcgacgttc gatgtcattg
     3361 attgatactt ccacgacgga acggtgcagc atcggttcga cgtcgcgcca gcgccagatg
     3421 aacggcgcgt cgggcgcctg cggctgcatc ggcgtgatgc gctggtagcg atcccacagc
     3481 ggatgcaggt gctttgcttc aagctccgat acgaaggcgc tgcccgcctt gcgtgtttcg
     3541 gcctcgacca tggccgcggc tcctctacgg acccacccga tcaccgcggg tctatcttct
     3601 tcgctacaac ttgctcgcca gctcacgtcc ggcaatgacg gcatcttacg tcttcggcag
     3661 cttcgcatcg acgttcgaac cgtcgatgat cacgtgctta atgaagacgc gcgtctcgac
     3721 cttgtcgcct ttgagaaacg cggcgagcac gtcgacgccg agccgacccc attccgcggg
     3781 attgagttcg accgtcatcg ccagattttc ctccttcacc gcccgcaacg ccggcggcac
     3841 gccgttcatg ccggtcacca gcgtcttgcc cttccggttc gcggcattga ccgcctgcat
     3901 ggcgccaagc gccacgtcgt cattggcggt gtagatcgcg gcaaggtcgg gatgtgccac
     3961 cagcacgtct tccgcctgct tgacgccgcg ttcgcgcgtg agcgggccat cggcgcggga
     4021 cacgatctcg atgccggggt atttcgccat gatctcactg aaaccttcgc cgagattcct
     4081 gaaggtcggc gcgccgctcg gtcccatgag caaagcgacc ttacccttgc cgccgagcct
     4141 gcgcgccgtc cactcggcga tgtcgcggcc gatctgcttc tcgtccatgg ccacatggat
     4201 ggtctggttc ggcgatgcgg agccgcgtgc gacggagacg atggggacct tggcggccgc
     4261 cgccgcatcg taagcggcgt tcaccccgac ggcgtcgatc ggcgagatca ggatgccctt
     4321 gacgccgcgg gcaatgagat cctgcacgcc gttgatctgc ttgagcttgt cctcgttggc
     4381 ggagaccgtg gcgacatccc aaccgagctc ctgggcacgg gcgcgaatgc cgcgcagcat
     4441 ggcgatatag aagggattgt cgtcctgggc gagcgatacg ccgatggtga tgttctgctg
     4501 agccgtcgcc gcccacgcca ctgcgagcgc ggccggtatg atcaacgcgg cggcaagcgc
     4561 cgccatgcga gccttgaaca tgcgaattcc tccatgccag cggtcagtca ccatttcatg
     4621 agagaccgga ttcgacttcc ctcggctttg gtgagccgcc gtccgcggca ttgattactg
     4681 accactcgcc gtgtgagagc gtagcctttc ggcggcggcg gcggcaatga tcactgcgcc
     4741 taccgccacg cgctgccaat aggaatcgac gttgagtagg ttgagcgcgt tgcccagcac
     4801 gatcatgatg aagaccccga tgacgctctt ataaagcgtg ccctcgccgc cctgcagcga
     4861 cgccccgccc aggaccaccg ccgcgatggc tgtcaactcg tagaattcgc ccgc
//
LOCUS       DATCWM010000138         4067 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_335997, whole genome shotgun sequence.
ACCESSION   DATCWM010000138 DATCWM010000000
VERSION     DATCWM010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4067
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_335997"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..236)
                     /locus_tag="VIQ50_02540"
     CDS             complement(<1..236)
                     /locus_tag="VIQ50_02540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY9359285.1"
                     /translation="MTLLSLNGITRRFGGLIAVDGVDLAVAKGGVTAVIGPNGAGKTT
                     LFNIISGFQAPNAGRIVFDGIDITGHPPEAIAAAG"
     gene            complement(233..1219)
                     /locus_tag="VIQ50_02545"
     CDS             complement(233..1219)
                     /locus_tag="VIQ50_02545"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9359286.1"
                     /translation="MKKSPATTYPERSAPERMWQALAAVPWAVACAMFAYAFIAGGYF
                     VTILSFALIYAVFVIGLNIFMGFAGQVSFGHNAFAALSGYASAILTANYYWDPIPAFA
                     VGLVLALAVALVVGWPTLRLKGHYLAMATLAIGLIVYEVAIQWQSLTQGYMGISGIAP
                     LGTLHVEVVSDRGKLLVLAAIVALAWLAAARVRVSRFGRALVAIAGSEDAARALGIDV
                     AHYKLAAFLVSAAYAALAGSLLVHVVEFVSPEVFGLNMVVLSFTMLYVGGIGTMSGPL
                     LGALIVSLLPELFRGFKDYQDLFYGAGLILLLIYAPKGLAALDGLAARRGRA"
     gene            complement(1188..1883)
                     /locus_tag="VIQ50_02550"
     CDS             complement(1188..1883)
                     /locus_tag="VIQ50_02550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011470600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9359287.1"
                     /translation="MLEIRRLSARYGRIEALHDVTLSVAEGEFVGLLGPNGAGKSTLM
                     RAVMGLVANSGEVRFRGEALPRQSPDLCVARGVVLVPEGRGIFAPMTVAENLELGAYL
                     LDEAAEFERRREQVFGLFPRIRERLSQVAGSLSGGEQQMLAVGRALMAAPKILLLDEP
                     SLGLAPKIIDEILGTLALLNKEGLTIVLVEQKAPLALRMTSRAYLLSLGRLIAEIDPR
                     TTSHEEIARNYLS"
     gene            complement(1890..3020)
                     /locus_tag="VIQ50_02555"
     CDS             complement(1890..3020)
                     /locus_tag="VIQ50_02555"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359288.1"
                     /translation="MKKSLTALGTVAVALAASSAGAQEAYKIGISAGLTGYAATVDRG
                     WRDGVGVAAAALNAKGGIMGRKIEVITEDNKSEPQEAVTVYRKMISSDKVNIFLSGCV
                     SAGNFAGAPLTVRAEIPMVLCSILPQNPDHVKWAFSTLPPAGFEVATRLDYLKNKTQV
                     RKFGVLHDPSPYAVLQKNIAEKTASNYGLELVGIEQYKQDDADLSVQISKMNAAGAGA
                     ILKIGLGGTTFTAAKNIKQLGLDMLMLTSVEDLAVFRPVAEVLGDRFFFVASPSQVYD
                     ALSDSVMKAEITKFLGPWKAKYQDRDPNWAARGWDGVMLTAKAIETGKSFEGAKVRDQ
                     LETISGFQGTTGVYSMSATVHQGITVNPFLLASIIGDRVVVK"
     gene            complement(3073..>4067)
                     /locus_tag="VIQ50_02560"
     CDS             complement(3073..>4067)
                     /locus_tag="VIQ50_02560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HEY9359289.1"
                     /translation="GQAASERLVAMCRRYGLIDIENLSDEIISRSEAAMRAAIGKLKA
                     GTYRGESHFDVPGGEIITLKTAVTVDPDAGEVTVDFTGSSPQTDSGINVVLNYTHAYS
                     TFAIRSCLNPELPNNTGSLAPIKVHVPEGSILNCKYPAPVAARHVVGMYVPMPILKAL
                     YRVVPDRVLAEGSGAVWTMQIQGKRADGRPFTSSMFNYSGGMGARATKPGPSATCYPT
                     GVAAVPIEIVEAVTPVIFDRKELRPNSGGEGAVRGGDGQIIQFHLDTRHEWLLNAVAS
                     RVDEGPEGLGGGAPGAPGKFHINGKPVHDHKKLTMQPGDVVLFETPGGGGYGYS"
BASE COUNT          771 a         1329 c         1274 g          693 t
ORIGIN      
        1 ccagccgctg cgatagcctc tggcgggtgg ccggtgatgt cgatgccgtc aaacacgatg
       61 cggcccgcgt tcggcgcctg gaagccggag atgatattga acaacgtggt cttgccggcg
      121 ccgttcgggc cgatcaccgc ggtgacgccg cccttggcga ccgcgagatc gaccccgtcc
      181 accgcgatca acccgccgaa ccgccgggtg attccattga gggagagaag cgtcatgccc
      241 tcccccgccg cgccgccaag ccgtcgaggg cagcgagccc cttcggcgca tagatcagca
      301 gcagaataag tcccgcgcca tagaacaggt cttgatagtc cttgaagccc cgaaacagct
      361 ccggcagcag gctgacgatc agcgcaccga gcagcggacc ggacattgtc ccgatcccgc
      421 cgacgtagag catggtgaag gacagcacca ccatgttgag cccgaacacc tcgggactga
      481 cgaactcgac gacatgaacg agtaacgagc cggccagcgc cgcataggcc gccgacacca
      541 ggaaggccgc cagcttgtag tgagcaacgt cgatgccgag cgcgcgagca gcatcctcgg
      601 agccggcgat cgccaccagc gcacggccga aacgcgagac gcgcacccgc gctgcggcga
      661 gccaagcgag cgcgacgatc gccgccagca cgagcagctt cccgcggtcg gacacgacct
      721 cgacatgcag cgtgccgagc ggcgcaatgc cggagatgcc catgtagccc tgggtcagcg
      781 actgccactg aatggcgact tcgtagacga tcagcccgat agcgagcgtc gccattgcaa
      841 ggtaatggcc cttcagccgc agcgtcggcc agccgaccac gagcgcaaca gccagcgcga
      901 gcacaagccc gaccgcaaag gccgggatcg ggtcccagta ataattggcg gtgaggatcg
      961 ccgaggcgta ccccgacagt gcggcgaatg cgttgtgacc gaacgacacc tgtccggcga
     1021 agcccatgaa gatattgagg ccaatcacga acaccgcata aatcagagca aacgacagga
     1081 tggttacaaa gtagcccccg gcgatgaacg cataggcgaa catggcgcag gctaccgccc
     1141 agggcaccgc ggcgagcgcc tgccacattc gctcgggcgc cgagcgctca ggataggtag
     1201 ttgcgggcga tttcttcatg cgaggtggtg cgaggatcga tttcggcgat caagcggccg
     1261 agcgagagca ggtaagcgcg gctggtcatg cggagcgcga gcggcgcctt ctgctccacg
     1321 agcacaatgg taagtccctc cttgttgaga agcgccagcg tgccgagaat ctcgtcgatg
     1381 atcttggggg cgagcccgag cgagggctcg tcgagcagca gtattttagg ggcggccatc
     1441 aatgcgcggc cgactgcgag catctgctgc tcgccgcccg acagcgagcc cgcgacctgc
     1501 gacaaccgct cgcggatgcg cgggaacagc ccgaacacct gttcgcggcg acgttcgaac
     1561 tcggctgctt cgtcgaggag ataggcgccg agctcgaggt tctcggcgac agtcatcggc
     1621 gcaaagatgc cacggccctc cggcaccagc accacaccgc gagccacgca cagatcgggc
     1681 gattggcgcg gcaatgcctc gccgcggaag cgcacctcgc cgctgttggc gacgaggccc
     1741 atcactgcgc gcatcagcgt gctcttgccg gcgccgtttg gtccaagcag tccgacgaat
     1801 tcgccttccg cgaccgacag ggtgacgtcg tgcagcgcct cgatgcgtcc gtagcgcgca
     1861 gatagccgcc ggatctccag catcgagggt cacttcacga cgacgcgatc gccgatgatg
     1921 ctggcgagca ggaacggatt gaccgtgatc ccctgatgca ctgtcgccga catgctgtag
     1981 accccggtgg ttccctggaa gccgctgatg gtctcgagtt gatcgcggac ttttgcaccc
     2041 tcaaagctct tgcccgtttc gatggccttg gcagtgagca tgacgccgtc ccagccgcgc
     2101 gcagcccagt tcgggtcgcg gtcctggtac tttgccttcc aagggcccag gaacttggtg
     2161 atttcggcct tcatgacgct gtccgacagc gcgtcgtaaa cctgcgaggg cgaggcaacg
     2221 aagaagaacc tatcgccgag cacctcggcg accggacgga acaccgcgag gtcctcgacg
     2281 ctcgtgagca tcagcatgtc gagaccgagc tgtttgatgt tcttcgccgc ggtgaacgtg
     2341 gttccgccga ggccgatctt gagtatggcg cccgccccgg ccgcattcat cttgctgatc
     2401 tgcacgctga gatcggcgtc gtcctgcttg tactgctcga tgcccaccag ctcgagtccg
     2461 tagttcgagg cggtcttctc ggcgatgttc ttttgcagca ccgcataagg cgacgggtcg
     2521 tgtaagacgc cgaatttgcg gacttgcgtc ttgttcttca gatagtcgag acgggttgcg
     2581 acttcgaaac ccgccggcgg cagcgtacta aacgcccatt tcacgtgatc cgggttctgc
     2641 ggcaggatcg agcagagcac catcgggatt tccgcacgca ccgtcagcgg cgcgcccgcg
     2701 aaattgccgg ccgagacgca gcccgaaagg aagatgttga ccttgtccga ggagatcatc
     2761 ttccgataga cggtcaccgc ctcctgcggc tccgacttgt tgtcctcggt gatgacctcg
     2821 atcttgcggc ccatgatgcc gcccttggca ttgagcgccg cggccgcgac cccgacgccg
     2881 tcccgccagc ctcggtcgac agtcgcggca tagccggtga ggcccgcgga gatcccgatt
     2941 ttgtacgcct cctgcgcgcc ggcggacgac gccgccagcg ctacagcaac ggtgccgagc
     3001 gctgtgagtg actttttcat ggaacaatcc tcccttgagg ttttcattgc agcctcagtt
     3061 ttcattgcag tctcaactgt atccgtagcc gccgcctcca ggcgtctcga acaacacgac
     3121 gtcgcccggc tgcatcgtca gcttcttgtg gtcgtggacc ggcttgccat tgatgtgaaa
     3181 ttttccgggc gcgccgggtg cgccgccgcc aagcccctcc gggccctcat ccacgcggct
     3241 cgccacagcg ttgagcagcc attcgtggcg ggtgtcgaga tggaactgga tgatctggcc
     3301 atcgccgcca cgaaccgcac cctcgccgcc tgaatttgga cgaagctcct tgcgatcaaa
     3361 aatgaccggc gtgaccgcct ccacgatctc gatcggcacc gcagcgacgc cggtcggata
     3421 acacgtggcg ctcggccccg gcttggtggc gcgggcaccc atgccgcccg agtagttgaa
     3481 cattgatgag gtgaagggcc gcccgtccgc gcgcttgccc tggatctgca tggtccaaac
     3541 cgcgcccgag ccctcggcca gaacccggtc ggggacgacg cggtagagcg ccttcaggat
     3601 cggcatcggc acgtacatgc cgacgacgtg acgagccgcg accggcgccg gatacttgca
     3661 gttcaagatc gagccctcgg gcacgtgcac cttgatcgga gcaagactgc cggtgttgtt
     3721 cggcaattcc ggattgaggc aggatcggat agcgaatgtg gaataggcgt gggtatagtt
     3781 cagcaccacg ttgatgccgc tgtcggtctg aggcgacgag ccggtgaaat ccactgtcac
     3841 ttcgccggca tcggggtcga cagtgaccgc cgttttcaac gtgatgatct ccccgcccgg
     3901 aacatcgaaa tgactctcac cgcgataggt gccggccttg agcttgccga tggccgcacg
     3961 cattgcggcc tcggaacgcg atatgatctc gtcggagaga ttctcgatat cgatcagtcc
     4021 atagcgacgg cacatcgcaa ccagccgttc gctcgccgcc tgcccac
//
LOCUS       DATCWM010000139         4728 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_55085, whole genome shotgun sequence.
ACCESSION   DATCWM010000139 DATCWM010000000
VERSION     DATCWM010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4728)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4728)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4728
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55085"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..253)
                     /locus_tag="VIQ50_02565"
     CDS             complement(<1..253)
                     /locus_tag="VIQ50_02565"
                     /inference="COORDINATES: protein motif:HMM:NF018032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase reactivating factor
                     EutA"
                     /protein_id="HEY9359290.1"
                     /translation="MHDLEFEHLHVSPDDVAVNEVAWAADNVELTTVGIDIGSSTSHL
                     MFARVHLQRLSTALSSRFVVVERNILWQSPILLTPYRADY"
     gene            complement(271..1392)
                     /locus_tag="VIQ50_02570"
     CDS             complement(271..1392)
                     /locus_tag="VIQ50_02570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359291.1"
                     /translation="MNKPITEIPHPKMLLDPYATWAAKEGVPVTEDFGVDLLEVATAP
                     WPRFGIDGGLVHLKGRGDFVSIFVLDLAPGAKSAPQKHLFEEVVYVLSGHGNTTVEAS
                     DGRKHSFEWGPKSLFALPLNARYQHFNSSGRERARLACTNNLALMLNLFHNESFVFEN
                     EYGFPERQGAAKYFSGEGEFIPVRPGRNMWETNFIPDLAGFELKTWEQRGAGGSNMMF
                     ILADGTMHAHTSQMPVGTYKKAHRHGPDFHVFAVTGHGFSLLWYEGAKDFVRIDWKHG
                     WVFAPPDQMFHQHFNTAGDPARYLAVAFGSLRYPFTADKRSVFQGMDVSVKDGGCQIE
                     YEHQDPRVHGIYLEELAKHGVASGMGKFIDERPYAKTTV"
     gene            1762..2739
                     /locus_tag="VIQ50_02575"
     CDS             1762..2739
                     /locus_tag="VIQ50_02575"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359292.1"
                     /translation="MAKLQLSFACGLYDRMQPLYTGEVRAEGIDLNFIAIEQPRAIFD
                     RMAGGEEFDVAEFSSSEFVQRFANKQCPFVAIPVFPSRAFRHGFIAVHRKAGIKTPKD
                     LEGKRVGVPLLTMTAAIYINGLLQHEYGVDLRKIHWVQGAMNTGGAHGSPTVLPLLKP
                     IAVEQNTSDKSMSDLIEERAVDATLGTSLPEAIRSNPDIVRLFPDYVELEKAFYKRTK
                     IYPIMHLVAIRKQLYERYPFIVTSLYNAFCEAKKIALEKMFNLRALRYMTPFLMRDID
                     EIYEVFDGDPWPYGIEPNRPTLEAFVAYLTDQSLIAAPVAVDDLFVSTY"
     gene            2794..3558
                     /locus_tag="VIQ50_02580"
     CDS             2794..3558
                     /locus_tag="VIQ50_02580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEY9359293.1"
                     /translation="MRNLDTIVQDLVIANRILAREEVVDAYGHVSVRHPENPKHFFLA
                     RSLAPDLVEVGDIVELGLDGEPVREETRPLYLERFIHAAIYEARPDVQSVVHAHAEEI
                     LPFGIARATPLRPVIHSGSFIGAKVPVWDIADKFGDTNLLVTNMEQGRDLAKCLASNN
                     VALMRGHGFASAARSLIEVVRISVYLPRNARALLRAKQLGGEITYLRQGEIDARNRGY
                     SPYSPETWRAWEYWANKAGCGHMLSKGEHAHTHKKA"
     gene            3591..>4728
                     /locus_tag="VIQ50_02585"
     CDS             3591..>4728
                     /locus_tag="VIQ50_02585"
                     /inference="COORDINATES: protein motif:HMM:NF008868.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dehydroadipyl-CoA semialdehyde
                     dehydrogenase"
                     /protein_id="HEY9359294.1"
                     /translation="MTTTPESLDSYLSGRWQRGEGIETTLVDPVSGDELATVSAKGLD
                     LKDALEFARSEGQGALRSLSYAERGKLVGAVADVLVANRARYEAIAIANSGNTKTDAA
                     IDIDGGIGTLKYYARLGAGLGDARALIDDKPARLAKAENYQAIHLMVPRRGVAVHINA
                     FNFPSWGLWEKAAVSLIAGVPVLAKPASATALLAHAMVKDVIAAKVLPEGALSLLCGG
                     AGALLGALTADDLIAFTGSADTAARVRGHANVIASNVPVNIEADSINAALLAPGAAPA
                     GAAFEAFVREIVREMTVKAGQKCTAIRRIFVPAQTTDAVADALAAKLKATKVGDPRQA
                     DTRMGPLVTRAQQAAAFDGIRRLASEATVLCGGAEAPPLDGIDRN"
BASE COUNT          874 a         1488 c         1527 g          839 t
ORIGIN      
        1 tgtagtcggc ccggtagggc gtcagcagga tcggcgactg ccacaggatg tttcgctcga
       61 cgacgacgaa ccggctcgac aacgcggtcg aaaggcgctg cagatgcacg cgcgcgaaca
      121 tcagatgcga cgtcgacgag ccgatgtcaa ttccgaccgt cgtcagctcg acgttgtcgg
      181 cggcccaggc gacctcgttg accgcgacgt cgtcgggact gacgtgaaga tgctcaaact
      241 cgaggtcgtg catcgagcgc tgcgttgccc ctagaccgta gtcttggcgt agggccgttc
      301 gtcgatgaac ttacccatgc cggacgccac accgtgcttg gcgagctcct cgagataaat
      361 gccgtggacg cgcggatcct ggtgctcgta ttcgatctga cagccgccgt ccttgacgct
      421 cacgtccatt ccctggaaca cactgcgttt gtcggcggtg aacggatagc gcaggctgcc
      481 gaaggcgacg gcgagatagc gcgcagggtc gccggcggtg ttgaagtgct gatggaacat
      541 ctgatccggc ggcgcgaaca cccagccatg cttccaatcg atgcgcacga agtccttcgc
      601 gccctcgtac cagagcagcg agaagccgtg cccggtgacg gcgaagacgt ggaaatcggg
      661 accgtggcga tgcgcctttt tgtaggtacc gaccggcatc tgcgaggtgt gggcgtgcat
      721 ggtgccgtcg gcgaggatga acatcatgtt cgatcctccg gcgccgcgct gctcccaggt
      781 cttgagctcg aagccggcga ggtcggggat gaaattggtc tcccacatgt tgcgtcccgg
      841 ccgcaccgga atgaactcgc cttcgccgct gaagtacttg gcggccccct ggcgttcggg
      901 aaagccgtac tcgttctcga atacaaacga ttcgttgtgg aacagattga gcatcagcgc
      961 gagattgttg gtgcaggcga gccgcgcgcg ctcgcggccg ctggaattga agtgctgata
     1021 gcgggcgttc agtggcagcg cgaacaggct cttgggaccc cactcgaagc tgtgtttgcg
     1081 cccgtcgctc gcttcgaccg tggtgttgcc gtgaccggag aggacgtaga ccacctcctc
     1141 gaagagatgt ttctgtggcg ccgacttcgc gccgggagcg agatcgagga cgaagatcga
     1201 gacgaagtcg ccgcggcctt tgaggtgaac gagcccgccg tcgatcccga agcgcggcca
     1261 cggcgcggtc gccacctcga gcaaatcgac gccgaaatct tcggtgaccg gcacgccttc
     1321 cttcgccgcc caggtcgcgt aggggtcgag cagcattttg ggatgcggga tctcggtgat
     1381 cggtttgttc atgcgctgac ctcacccggc tttgcccctc gtcaggactc tgagggagca
     1441 tctgtgtcga gcgcgacatt agcacgtgcc gatagcggcg atgaactggt tagtgggcca
     1501 gtgtggccgt ttaaaagtcc gcatcattct tgcagcgagt ccgaaatgcg gacttctgaa
     1561 ccaaagccac actagatcaa taagttgcta gtgtccttcg attccgaagt tcgcaaacga
     1621 ggctgcagca caatgatgcg aacttcggaa tcgggacact agccgatgcg ccgcccggcg
     1681 agcgggcgat cggggttttc ggccgcggcg cgcgcatgct aaggctgaag tctcgctcga
     1741 gggcaccggg gacgccggca aatggccaag ctgcagcttt cgttcgcgtg cgggctctac
     1801 gaccgcatgc agccgcttta taccggcgag gtcagggcgg agggcatcga tctcaatttc
     1861 attgccatcg agcagccgcg agcgatcttc gaccggatgg cggggggcga ggaattcgac
     1921 gtcgccgaat tttcgagctc ggagttcgtc cagcgctttg ccaacaaaca gtgccctttc
     1981 gtcgccattc cggtgtttcc ctcgcgggcg ttccgccacg gcttcatcgc cgtccaccgc
     2041 aaagcgggca tcaagacccc caaggatctc gaaggcaagc gcgtcggcgt gccgctgctg
     2101 accatgaccg cagccatcta tatcaacggg ctcctgcagc acgaatacgg cgtcgatctg
     2161 cggaagatcc attgggtgca gggcgccatg aataccggcg gcgcgcatgg cagcccgacc
     2221 gtgctgccgc tgctcaagcc tatcgcggtc gagcagaaca cgtcggataa atcgatgagc
     2281 gacctcatcg aggagcgcgc cgtcgatgcg acgctgggca ccagcctgcc ggaggcgatc
     2341 cgcagcaatc ccgacatcgt gcgcctcttt cccgattacg tggagctgga aaaagcgttc
     2401 tacaagcgca caaagatcta tccgatcatg catctggtcg ccatccgcaa acagctctac
     2461 gagagatacc ccttcatcgt caccagcctg tacaacgcgt tttgcgaagc taagaaaatc
     2521 gcgctcgaga agatgttcaa tttgcgcgcg ctgcgctaca tgacgccgtt cctgatgcgc
     2581 gatatcgacg agatttacga agtattcgac ggcgatccgt ggccgtacgg gatcgagccc
     2641 aaccggccga ccctcgaagc tttcgtcgcc tatctcacgg atcagtcgtt gatcgccgcg
     2701 cccgttgcgg tggatgatct cttcgtctcg acttactagg caaaatgcaa cccgtcctcg
     2761 ccggagggtg catcggttca gggtcagcca gccatgcgca atctcgatac catcgttcag
     2821 gatctcgtca ttgccaaccg cattctcgcg cgggaggagg tcgtggatgc ctacggccat
     2881 gtcagcgtgc gtcacccgga gaacccgaag catttttttc ttgcccgctc gctggcaccc
     2941 gacctggtcg aagtcggcga catcgtcgag ttggggctcg acggggagcc ggtgcgtgag
     3001 gagacgcgcc cgctctacct cgagcggttc attcacgccg ccatctacga ggcgcggccc
     3061 gacgtccagt cggtcgtcca cgcccatgcc gaggagatcc tgccgttcgg gatcgcgcgg
     3121 gcgacgccgc ttcgccccgt gattcattcc ggcagtttca tcggcgccaa ggtgccggtg
     3181 tgggacatcg ccgacaagtt cggcgacacc aacctactcg tcaccaacat ggagcaaggg
     3241 cgcgacctgg cgaaatgtct cgccagtaac aacgtcgcat tgatgcgggg gcacggcttt
     3301 gcttcggccg cccgctcgct catcgaggtg gtgcgaatct cggtctacct gccgcgcaac
     3361 gcgcgcgcgc tgctgcgcgc caagcagctg ggcggcgaga tcacgtatct gcgccaaggc
     3421 gagatcgatg cgcgcaaccg cggctacagt ccctattcgc cggagacctg gcgggcttgg
     3481 gaatattggg cgaacaaggc gggttgcggt cacatgctca gcaagggcga gcatgcgcat
     3541 actcacaaga aggcgtgaag acccgatagt cgcgtccgag ggagcgagcc atgacgacga
     3601 cgccagagtc tctcgacagc tatctgtccg gtcggtggca acgcggagag ggcattgaaa
     3661 ccaccctcgt cgatccggtc tcgggcgatg agcttgcgac cgtgtcggca aaaggcctcg
     3721 atctcaaaga cgcgctcgaa ttcgcgcgca gcgaaggcca gggcgccctg cgaagcttga
     3781 gctatgccga gcgaggaaag ctcgttggcg cagtcgccga cgtcttggtc gcgaaccgcg
     3841 cccgctatga agcgatcgcc atcgccaatt ccggcaatac caagacggac gcggcgatcg
     3901 acatcgacgg cggcatcggc acgctgaaat attatgcccg gctcggcgcc gggctgggcg
     3961 atgcgcgcgc tctcatcgat gacaagccgg cgcggttggc gaaggcggag aattatcagg
     4021 cgatacacct gatggtgccg cgccgcggcg tcgccgtgca catcaacgcg ttcaatttcc
     4081 cgagctgggg tctgtgggag aaggcggcgg tgtcgctcat cgccggcgtg cctgtcctcg
     4141 ccaagccggc gtccgcgacc gcgctgttgg cgcacgccat ggtgaaggac gtgatcgccg
     4201 ccaaggtgct gcccgaaggc gcgctaagcc tcctatgcgg cggcgcgggc gcgctcctcg
     4261 gggcactcac tgccgacgac ctcatcgcct ttaccggctc ggccgacacc gccgcgcgcg
     4321 tgcgcgggca tgccaacgtg atcgccagca acgtgccggt gaacatcgag gcggacagca
     4381 tcaacgcggc gctgctggcg ccgggcgccg cgcccgcggg cgcggctttc gaggcgttcg
     4441 tgcgcgaaat cgtgcgcgag atgaccgtca aggccgggca gaaatgcacc gccatccgcc
     4501 gcatcttcgt gccggcacaa acgaccgatg ccgtcgccga cgcgctggcg gcaaaactca
     4561 aggccacgaa ggtcggcgac ccccgacagg cggatacccg catggggccg ctggtgacgc
     4621 gcgcccagca ggcggccgcg ttcgacggca tccggcgctt ggcgtcggag gcgaccgttc
     4681 tctgcggcgg cgccgaggcc ccgccgctcg acggcatcga ccggaaca
//
LOCUS       DATCWM010000140         6113 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_530312, whole genome shotgun sequence.
ACCESSION   DATCWM010000140 DATCWM010000000
VERSION     DATCWM010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6113
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_530312"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..495
                     /locus_tag="VIQ50_02590"
     CDS             <1..495
                     /locus_tag="VIQ50_02590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HEY9359295.1"
                     /translation="MVLVLSRGGFCPKDRRQAEGLLELHREMEVGYCRLVTISTDNIT
                     ETNEYRSGVGAHWPFLSDTRRTVQKDLDIAEYTDSAHNPMIPHVIVLEPGLVIYKIYN
                     GHWFFGRPTLEELRQDLRAVSKKCRPDWDFTTPELKAAWQQGRKELFYPYGKTYAQTI
                     GEQD"
     gene            complement(556..1350)
                     /locus_tag="VIQ50_02595"
     CDS             complement(556..1350)
                     /locus_tag="VIQ50_02595"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY9359296.1"
                     /translation="MPGRLDGIHALITGAAGGIGAACARRMAGEGAQLLLADLNGEAA
                     KSLADELGQASVQADVTRAADIDRIFELAYRRWGRLDVLFNNAGIAEARRMLELTPEE
                     WDRTLAVNLRAVFFVLQAAAKRMRQQTPIAGSELRGKLIQTASIAAYRGGQAYMVHYG
                     ASKAGVVSITRTAAQVLAADRITSNCVCPGAVDTAMWKKIDAEWSEIEGWRVGEAWKR
                     RTAIIPLGRPETAEDVAGVVSFLASRDSDYMTGQAVNVDGGLVMGN"
     gene            complement(1635..2021)
                     /locus_tag="VIQ50_02600"
     CDS             complement(1635..2021)
                     /locus_tag="VIQ50_02600"
                     /inference="COORDINATES: protein motif:HMM:NF018717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1330 domain-containing protein"
                     /protein_id="HEY9359297.1"
                     /translation="MKTYTTVILAALAGAGIGGLAVQGLQAQTKLPTAYYIAEIDVTN
                     EDVYNKQWIPKVDETVKAAGGVYLVRSTNVERIEGAAPKRLLISKWENIDKLTAWRES
                     EAYMKTLPILDKAVKSVRSYAVEGIN"
     gene            complement(2085..3569)
                     /locus_tag="VIQ50_02605"
     CDS             complement(2085..3569)
                     /locus_tag="VIQ50_02605"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9359298.1"
                     /translation="MEKLYDLVIKNARVVRPNRTSVDCLDIAIKEGKVARLSPDIQAE
                     QAKEVFDARNLLAFPGCVDAHMHIGIYAPLAEDAISESKAAAMGGVTSSLNYIRTGHY
                     YLNRGGPYRDFMPEVLKQSEGRFWVDYGYHIAPIEAGHIDEMEHLVLDHGVLSFKIFM
                     FYGGYGLHGRSAHQNEFLMLGPEDRYDIAHFEFIMRSAQRLMAKYPELAGYISVSLHC
                     EIAEILNAYTKLVERDGTLTGLHAYSAARPPHSEGLAIWIASYLANETNCLNVNLLHL
                     SSRKAIEAAWIMQQVFPHIAFRREVTVGHLLLDADCARAVHAKVNPPIRPRQDVEALW
                     QAVLERKVDWIVSDHACCSAEQKWSKEDPTNIWLAKAGFGGTEYLLSGVLSEGSKRGM
                     SYNHMAELLSFKPAQRFGLLSKGDIAPGYDADIALVDPHESFVVRAADSQSVQGYSPF
                     EGLELTGRVKTTFLRGVAVFDHGNINAPARGLYLRRPQRTVPTP"
     gene            complement(3632..4558)
                     /locus_tag="VIQ50_02610"
     CDS             complement(3632..4558)
                     /locus_tag="VIQ50_02610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008139172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/PEP mutase family protein"
                     /protein_id="HEY9359299.1"
                     /translation="MADVTNLPARLGRKPIVVAPGVYDAFTALLAERSGFATLYVSGA
                     AISYTRLGRPDIGLVSMSEVVETVGTIRDRVNADLIVDADTGYGNALNVGRTMRLFER
                     AGASAIQLEDQDFPKRCGHLDGKVLIPPAEMAGKIKAAVDARRSRETLVIARTDAIAV
                     EGFERAVERAALYRDAGADVLFVEAPQTRAELERIPPALGNAPLMANMVEGGKTPPLP
                     SAELEAIGFALVIFPGGIVRALARMASEYYASLAASGTSEPFRSRMLDFAALNDLIGT
                     PEMLALGKRYDTSARTSFGKRNTRAEIARSES"
     gene            4815..5033
                     /locus_tag="VIQ50_02615"
     CDS             4815..5033
                     /locus_tag="VIQ50_02615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359300.1"
                     /translation="MSFMVVSLIYAGTILLALGIAAWIARAWTRRRYQHKSPSDLHYI
                     VVGIILLVSAGIGMLVASYIVVAIGYMG"
     gene            complement(5094..5795)
                     /locus_tag="VIQ50_02620"
     CDS             complement(5094..5795)
                     /locus_tag="VIQ50_02620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9359301.1"
                     /translation="MLAVSGLAAGYGASEVLRGIDLEVDAGEIVTVLGSNGAGKSTLN
                     RTISGVLRATRGSIRFAGQAIEREKPATIVARGLIHVPEARCVFPNLTIEENLDLGSY
                     RRGRVRRERNRARVFAIFPRLAERRSQRAGTLSGGEQQMLAIGRGLMAEPELLILDEP
                     SLGLSPRLVEELFALIRRINSEGIALLLVEQNVVQCLEVARRAYILEGGTFVLQGNAA
                     DIRDDPNLKRAYLGL"
     gene            complement(5800..>6113)
                     /locus_tag="VIQ50_02625"
     CDS             complement(5800..>6113)
                     /locus_tag="VIQ50_02625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019998977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9359302.1"
                     /translation="ARALAVGPELLLLDEVLAGLNPREVAAMVPVIRALAGRGITILM
                     IEHVMQAVMRLAEQVFVLAQGRIIAEGTPQAVVGDAAVIEAYLGHGAAARLSGAGGAH
                     V"
BASE COUNT         1122 a         1915 c         1914 g         1162 t
ORIGIN      
        1 atggtgctcg tcctcagccg cggcggtttc tgccccaagg accgcagaca ggctgaaggg
       61 cttcttgaac tccatcgtga gatggaggtt ggctattgcc gccttgtgac gatcagcacc
      121 gacaacatca ctgagacgaa cgaatatcgc agcggtgtcg gcgctcactg gcccttcctc
      181 tcggacacga ggcgcaccgt ccaaaaagat ctcgacatcg ccgaatatac ggattcagcc
      241 cacaatccga tgatccccca tgtgattgtc ctcgagcctg gcctcgtcat ttacaagatc
      301 tacaatggcc actggttctt cggccggccc actctcgaag aactccgtca ggatctacgt
      361 gctgttagca agaaatgccg gccagactgg gacttcacaa cgcccgaact caaggcggct
      421 tggcagcaag gccgcaagga actcttctat ccctacggca agacctacgc ccaaactatc
      481 ggtgaacagg actagaagcg gtgtccgcgt gagcaaggcc aggatgccgt tgcgcttatc
      541 ctggacgcgt cgatttcagt tgcccatgac gagaccgccg tcgacgttga cggcctggcc
      601 ggtcatatag tcggagtcgc ggctggcgag aaagctcacg acgccggcca cgtcctcggc
      661 cgtttccggt cggccgagcg gaatgatcgc ggttcgccgt ttccacgctt cgccaactcg
      721 ccagccctcg atctcgctcc actcagcatc gattttcttc cacatcgccg tgtcgaccgc
      781 accagggcag acgcagttcg acgtgatccg gtcggccgcg agtacctgcg cggcggtgcg
      841 ggtaatgctg acaaccccag ccttgctggc gccgtaatgc accatgtagg cctgaccgcc
      901 gcggtaggcg gcaatcgagg cggtctggat caattttcca cgcagctcgg agccggcaat
      961 cggcgtctgc tggcgcatgc gcttggccgc ggcttgcaac acgaagaaaa cggcgcgcag
     1021 gttgactgcc agcgtgcggt cccactcctc cggcgtgagc tcgagcattc tgcgggcttc
     1081 ggcgatcccc gcgttgttga acagcacgtc caggcgtccc cagcgccggt aggccaactc
     1141 gaatatgcga tcgatatccg ccgcacgggt aacgtccgcc tggacggatg cctggccgag
     1201 ttcgtcggcc agggacttcg ccgcctcacc gttgagatcc gccaacagca attgcgcgcc
     1261 ttcaccggcc atgcggcgcg cgcacgcggc gccgatcccg cccgccgcgc cggtgatgag
     1321 cgcatgaatg ccgtccagcc gaccgggcat gtgcgacgcg ctttaaggtt ttagaccgcc
     1381 aagtgcgagg tggagcgcgc caacactttt gggcttgtat cgcatggcgt cctccttatt
     1441 gcccgatccc gattgtcgaa gtgccgcgaa tagcctagca cctctcgctg caacgcgcga
     1501 cggggcagcc aagcctagcg ttgacgttgg tctgtgccta gcgttgacgt tggtcggtgt
     1561 ccgcacgacg gagcggcgaa atcggggaag atccggcgat ggcggaagtt cgtgtccgat
     1621 cccaaccctt cgcgctaatt gatcccttcg accgcgtatg agcgcacgga tttgaccgcc
     1681 ttgtcgagga tcggcagcgt cttcatatag gcctcggatt cgcgccaggc ggtcagcttg
     1741 tcgatgtttt cccatttgct gatcaatagc cgctttggag cggcgccctc gatccgctcg
     1801 acgttcgtgc tgcgcacgag gtagacgccg cccgcggctt tgaccgtctc gtcgactttc
     1861 ggaatccact gcttgttgta aacgtcctca ttggtcacgt cgatttcagc gatgtaatac
     1921 gccgtcggca gcttggtttg ggcctgaagg ccttggacgg cgagaccgcc gatgccggcg
     1981 ccggcgagcg cggccaatat caccgtggtg tatgtcttca tcggttcgac ctcattgtgg
     2041 gctaaagcag ggctatcaga cgagaactcc gcagtacgga gagatcaggg ggtaggaacg
     2101 gttcgctgcg gccggcgcag gtatagaccc cgcgccggag cattaatgtt tccgtgatca
     2161 aacaccgcaa cgccacgcaa gaacgtggtc ttgacccgac ctgtgagctc gagcccctcg
     2221 aagggcgaat agccctggac ggattgggag tcggcggcgc gaacgacgaa gctctcatgc
     2281 gggtccacga gcgcgatgtc ggcatcgtaa ccgggggcga tatcgccctt gctgagcaag
     2341 ccgaaccgct gcgccggctt gaagctcaga agttcggcca tgtgattgta cgacatgccg
     2401 cgcttgctgc cttcgctcag cacgccggag agcagatact cggtgccgcc aaatcccgct
     2461 ttcgccagcc agatattggt cggatcctct ttcgaccatt tctgttcggc ggaacagcag
     2521 gcgtggtcgc tcacgatcca gtcgacctta cgctccagga ccgcctgcca taacgcctcc
     2581 acgtcctgcc gcggacggat cggcggattg acttttgcgt ggacggcgcg ggcgcaatcg
     2641 gcgtccagca gcagatggcc caccgtcact tcccggcgga aggcgatgtg cggaaacacc
     2701 tgttgcatga tccacgccgc ttcgatcgcc ttgcgcgagc tcaggtgcag gagattgacg
     2761 ttcaggcagt tggtttcgtt ggcgaggtag gaggcaatcc agatggcaag cccttcggaa
     2821 tgcggcggac gggcggcgct gtaggcgtgc aggccggtca aggtgccgtc gcgctcgacc
     2881 agtttggtat aggcgttgag gatctcggca atctcgcaat gaaggctgac gctgatgtag
     2941 ccggcgagtt cgggatattt cgccatcaag cgctgtgcgg agcgcatgat gaactcgaaa
     3001 tgcgcgatgt catagcggtc ctcggggccg agcatgagaa attcgttctg atgggcggaa
     3061 cgtccgtgca gcccgtatcc gccatagaac atgaatatct tgaatgagag gacgccgtgg
     3121 tcgaggacaa gatgttccat ttcgtcgata tgcccggcct cgatcggcgc aatgtgatag
     3181 ccgtaatcga cccagaatcg tccctcggat tgcttgagca cttccggcat gaagtcgcgg
     3241 tatggaccgc cgcggttgag atagtaatgg cccgtgcgta tgtagttcag gctcgaggtc
     3301 acgccgccca tcgccgccgc cttgctctcc gaaatcgcgt cctcggcgag tggcgcataa
     3361 ataccgatgt gcatatgggc atcgacgcag cccgggaagg cgagaagatt cctcgcgtcg
     3421 aaaacctctt tcgcctgttc ggcctggatg tccggtgaca gacgcgcgac ctttccttcc
     3481 ttgatggcga tgtcgaggca atcgaccgag gtcctgttgg gacgcaccac gcgggcgttc
     3541 ttgatgacga gatcgtagag tttttccatt cgcgtctgcc cgcttcggcc ttttccggtt
     3601 cacacgagat gcattggaca tcggtgaaag atcaagactc ggaccgtgca atttcagcac
     3661 gcgtgttccg cttgccgaac gaagtccgtg cggaagtgtc gtagcgcttg ccgagcgcga
     3721 gcatctccgg cgttccgatc aaatcattca gagcagcgaa atcgagcatg cgggaacgga
     3781 acggctcgga tgtcccggac gcggcgagcg aggcgtaata ctcgctcgcc atgcgcgcca
     3841 atgcgcgcac gatcccgccg ggaaagatga cgagggcgaa acctatcgcc tcgagttctg
     3901 ccgacggcaa cggcggggtc ttgccgccct cgaccatatt cgccatcagc ggcgcgttgc
     3961 cgagcgccgg cgggatgcgc tcgagctccg cgcgcgtctg cggcgcctcg acgaacagaa
     4021 cgtcggcgcc ggcgtcgcga tagagcgcag cgcgctcgac ggcgcgctcg aagccttcga
     4081 ccgcgatcgc gtcggtacgc gcgatcacca gtgtctcgcg cgagcggcgc gcatcgaccg
     4141 cggccttgat cttccccgcc atctcggccg gcgggatgag gaccttgcca tcgagatggc
     4201 cgcaacgttt gggaaaatcc tggtcctcga gttggatggc gctcgccccc gcgcgctcga
     4261 atagccgcat ggtccgcccc acgttgagcg cattgccata gccggtgtcg gcatcgacga
     4321 tcagatcggc gttgacacgg tcgcggatcg tgccgacggt ttcgacgacc tcgctcatgc
     4381 tcacgagccc gatgtccggc cggccaagcc gcgtataaga gatcgccgca ccggagacgt
     4441 aaagcgtggc gaacccgctg cgttcggcca acaacgcggt gaacgcatcg tagacgccag
     4501 gagcgaccac gatcggcttg cgcccgaggc gggcaggcag gtttgtcacg tcagccatgg
     4561 tgatgataat ccgaggtagg cgcgttgagt ttcgagatgc aaaatatcgt cgcgatgcga
     4621 caaaaattca gttgcaggct ggcggtgcct gtgttggtga aacccacatc aatgacggaa
     4681 aatggccgtt ctggcattcc ggaccgctac ggttgcccac gatcacgaag ggtaatctcg
     4741 cactcggcct tgcgggtcaa ctgggttgca tccctctggg caatgcctga ctctagccac
     4801 gccgtccgcg gaacatgagc ttcatggttg tttccttgat atacgcggga acaatcctct
     4861 tggcgctggg gattgcggca tggatcgcgc gagcttggac gcgccggcgc tatcagcata
     4921 aaagtccgag cgatctccat tacatcgtcg tggggatcat cctgctagtg agcgcgggaa
     4981 tcggaatgct ggtcgcctcg tacattgtcg tcgcgatcgg ctatatgggt tgatattgcg
     5041 gttgcatccc cactgcccga cgcagcccac cgtcgcgtag ccggctacca tcgtcatagt
     5101 ccgaggtagg cgcgtttgag attcgggtcg tcgcggatgt cggccgcgtt tccctgcaac
     5161 acgaacgtgc cgccttccaa aatataggcg cggcgcgcca cttcgaggca ctgcaccacg
     5221 ttctgctcga ccaggaggag cgcgatgcct tcggagttga tgcgccggat cagggcgaac
     5281 aactcttcga ccagccgcgg tgagagcccg agcgacggct cgtcgagaat gagcaattca
     5341 ggctcggcca tcaatcctcg gccgatcgcc aacatctgct gctcgccacc cgagagcgta
     5401 ccggcgcgtt gcgagcgccg ctcggcgagg cggggaaaga tcgcaaagac ccgcgcgcgg
     5461 tttctttccc gccggacgcg gccgcgccgg tagctgccga gatcgagatt ctcctcgatg
     5521 gtcagattgg gaaagacgca tctcgcctcg ggcacgtgga tgagcccgcg cgcgacgatc
     5581 gtcgctggct tctcgcgctc gatggcctgg ccggcgaagc ggatggagcc gcgcgtcgcg
     5641 cgcagcacgc cggagatcgt gcggttgagc gtcgacttcc ccgctccgtt cgagccgagc
     5701 acggtcacga tttcgccggc gtcgacctcg agatcgatgc cgcggagcac ttcgctcgcg
     5761 ccgtagccgg cggcaagccc gctgaccgcg agcagcgcct cagacatgcg cgcctcccgc
     5821 gccggacaga cgcgcggctg cgccatggcc gagataagcc tcgatgacgg ccgcgtcgcc
     5881 caccacggcc tgcggcgtgc cttcggcgat gatgcggccc tgcgccagca cgaaaacctg
     5941 ttcggcaagc cgcatcactg cctgcatcac gtgctcgatc atcagtatcg ttatgccccg
     6001 cccggcgagc gcgcggatga ccggcaccat ggcggcgacc tcgcgcggat tgagcccggc
     6061 gagcacttca tcgagcagaa gaagctcggg cccaaccgcg agtgcgcgcg cga
//
LOCUS       DATCWM010000141         2147 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_49870, whole genome shotgun sequence.
ACCESSION   DATCWM010000141 DATCWM010000000
VERSION     DATCWM010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2147)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2147)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2147
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49870"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..494)
                     /locus_tag="VIQ50_02630"
     CDS             complement(<1..494)
                     /locus_tag="VIQ50_02630"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY9359303.1"
                     /translation="MGRAAASAEDVSKRFGATVALDGVNFAVAFGEIHAVVGENGAGK
                     TTLIRILGGVHRPDRGVVCVDGEERQFVSPRDAIAAGIVTIPQELRLVPALSIAENIA
                     LGDVPVRRFGPLALIDRTRMHEEAREVLAELDFAPDPRALVASLGFAERQLVAIAKAL
                     RRRCR"
     gene            complement(542..877)
                     /locus_tag="VIQ50_02635"
     CDS             complement(542..877)
                     /locus_tag="VIQ50_02635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359304.1"
                     /translation="MNDWLEGNKAHVDDLDGHAISHLGWGLNPQGRWDALALHGADPK
                     RHHAGARCFAGNFLFSTGPNSQGGGKRTTKGHYDVPMRDCTVALDNDVIIERGKLTDP
                     KMQVAFVPR"
     gene            complement(874..1602)
                     /locus_tag="VIQ50_02640"
     CDS             complement(874..1602)
                     /locus_tag="VIQ50_02640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359305.1"
                     /translation="MHEALNHAKLAMLFRKEFELCNARKGETVVLLSDLGAPRDYVAA
                     AFAAAEDFGADAYEMCVNAMPSWTKVGVETVGRCKGTLEAIKAADMLVCLHIPLFTRW
                     LKEAREAGTRVLMVIDGPDELETLMAPPGLKQAVICAGQRLERAKTMRITRPGGTDLT
                     VKLGEYPTMIQYGYAESPGRFDHWGAGHVHTFPSEGSANGTVVLAPGDIVVLPYCRYV
                     QDEVRLDIRDGLSARSRAASTPSS"
     gene            complement(1650..>2147)
                     /locus_tag="VIQ50_02645"
     CDS             complement(1650..>2147)
                     /locus_tag="VIQ50_02645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015668342.1"
                     /note="catalyzes the conversion of salicylyl-CoA to
                     gentisyl-CoA; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional salicylyl-CoA
                     5-hydroxylase/oxidoreductase"
                     /protein_id="HEY9359306.1"
                     /translation="PMSVRISATDWVDGGLTGDDAVEVARAFAAAGCDLIDVSTGQTV
                     PDAHPVFGRMFQTPFSDQIRNEASLATMCVGAITTADQVNTIIAAGRADLVALARPHL
                     VEPYFSMQAAAWYNASAIHCPPQYLAGKEQLFRNSARDREELRELRLKAKPKTHRDTW
                     KEAAE"
BASE COUNT          337 a          714 c          719 g          377 t
ORIGIN      
        1 cggcagcgcc ggcgcagcgc cttggcgatg gccacgagct ggcgttccgc gaagccgagc
       61 gaagcgacca gcgcgcgcgg atccggcgcg aagtcgagct cggcgagcac ctcgcgcgcc
      121 tcctcgtgca tgcgcgtgcg atcgatcagc gcgagtgggc cgaagcgccg caccggaacg
      181 tcgccgagcg cgatattttc cgcaatggag agtgccggta cgagcctcag ctcctgcggg
      241 atggtcacga tgcccgcggc gatggcgtca cgcgggctta caaattggcg ttcttccccg
      301 tcgacgcaga cgacgccgcg gtcgggacga tggacgccgc ccaggatgcg gatcagcgtg
      361 gttttgccgg cgccgttctc gccgacgacg gcgtggattt cgccaaacgc caccgcgaag
      421 ttgacgccgt cgagcgcgac cgtggcgccg aatcgtttgc tcacatcctc ggcactcgcc
      481 gccgcacgac ccatcgcgaa tccatccgcc gtcatatcgg agcgtggcgg cggcactccg
      541 ttcacctcgg aacgaacgcc acctgcatct ttggatcggt caacttgcca cgctcgatga
      601 tgacgtcgtt gtcgagcgcg accgtgcagt cccgcatcgg cacgtcgtaa tggcccttgg
      661 tcgtgcgttt gccgccgccc tgcgagttgg ggccggtcga gaacaggaag ttcccggcga
      721 agcagcgtgc gccggcgtgg tgccgcttgg gatcggcgcc atgcagcgcg agcgcgtccc
      781 agcgaccctg cggattgagt ccccagccga gatgcgagat ggcatgaccg tcgaggtcgt
      841 ccacgtgcgc cttgttgcct tcgagccaat cgttcatgag cttggcgtcg aggccgccct
      901 cgatcttgcg gataagccgt cgcggatgtc gagccgcacc tcgtcctgca cgtaccggca
      961 ataaggcagc acgacgatgt cgccgggggc aagcaccacg gtgccgttgg cggagccttc
     1021 gctggggaag gtgtgcacgt ggccggcgcc ccagtggtcg aagcggcccg gtgattccgc
     1081 atagccgtat tgaatcatgg tcgggtattc cccgagcttc acggtcagat cggtgccgcc
     1141 cgggcgcgtg atccgcatgg tcttggcgcg ctccagccgt tgccccgcgc agatcaccgc
     1201 ctgcttgagg ccgggcggcg ccatcagcgt ctcgagctca tcggggccat cgatgaccat
     1261 gagcacgcgg gtgccggcct cgcgcgcctc cttgagccag cgcgtgaaca acggaatgtg
     1321 caggcagacc agcatgtccg ctgccttgat cgcctcgagc gtgcctttgc agcgcccgac
     1381 ggtctcgacg ccgaccttcg tccatgacgg catggcattg acgcacattt cgtaggcgtc
     1441 ggctccgaaa tcctcagctg ccgcgaacgc ggcggcgacg taatcgcgag gcgcgccgag
     1501 atcgctcaag agcacgacgg tctcgccctt gcgcgcgttg caaagctcga attccttgcg
     1561 gaagagcatc gccagtttgg cgtggttcaa cgcttcgtgc atctggctcc tcctttactt
     1621 gaatgtcacc cgtccggtga ccgataaccc tactccgccg cctccttcca agtgtcgcgg
     1681 tgggtcttcg gtttggcctt gaggcgcagc tctcgcaatt cctcgcggtc gcgcgcgctg
     1741 ttgcgaaaaa gctgctcctt gccggcgagg tattgcggcg ggcaatggat cgcgcttgcg
     1801 ttgtaccacg ccgccgcctg catgctgaaa tagggctcga cgagatgggg gcgcgccagc
     1861 gccacgagat cggcgcggcc cgcggcgatg atggtgttga cttgatccgc ggtcgtgatc
     1921 gcgccgacgc acatcgtggc aagggaggcc tcgttgcgga tctgatcgga gaacggcgtc
     1981 tggaacatgc ggccgaagac agggtgcgcg tccggcacgg tctgcccggt cgaaacgtcg
     2041 atgagatcgc aaccggccgc tgcgaaggcg cgcgcgacct cgaccgcatc gtcgccggtg
     2101 agcccgccgt ccacccagtc ggtcgccgag atgcgcaccg acatcgg
//
LOCUS       DATCWM010000142         2941 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_147077, whole genome shotgun sequence.
ACCESSION   DATCWM010000142 DATCWM010000000
VERSION     DATCWM010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2941)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2941)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2941
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147077"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..678
                     /locus_tag="VIQ50_02650"
     CDS             <1..678
                     /locus_tag="VIQ50_02650"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9359307.1"
                     /translation="AAVMNKSLRYDTLSAFDPVSQVATAGLIIVTRPDFPADDVKQLV
                     AAAKANPGKIAFASPGFGATQHLTAELFRQTTGIDVLHVPFRTSPEAISALLGKQVDV
                     VFETVSAVLGQVQSGQLKALAVTGRERFPAVPDVPTAIESGVLPGYDVTTWYGVFAPR
                     GVPPETIAKLNKAINESLAEEVVQKRLTTAGVLVRGSTPEAFGEHMVREFARWNAVRE
                     AAGIPQQ"
     gene            complement(934..1317)
                     /locus_tag="VIQ50_02655"
     CDS             complement(934..1317)
                     /locus_tag="VIQ50_02655"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEY9359308.1"
                     /translation="MDTRDLHDKGLKLRREMFGREAVEQRMNAFGAFGEPLQTVINAY
                     AYGDIWSRPGLPLKTKSLAAVAMTAAIGRANELRVHVNGALTNGCTAEEIREILLLVA
                     LYCGIPAANEGHRIAFDVLRERGAA"
     gene            complement(1382..2491)
                     /locus_tag="VIQ50_02660"
     CDS             complement(1382..2491)
                     /locus_tag="VIQ50_02660"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEY9359309.1"
                     /translation="MKQDNIGIAVVGSGRIGTLRAQLAAKHPAVRFLAVSDRDPVRAR
                     ALAETAGADFHSGSNEEVIAHPRVTAVIVSTPEQQHTPPVLHALELGKPVLVEKPIGF
                     SLRDADKILDTLRATKGELRVGYSRRYKECFLRAKEQMRHGRLGKVVGGMARVYNSRA
                     QAFAILKRDPHATPVLDVLTYYVDLMCWFLEGNRPVEVVARGQHGIFKEAGYGAHDVT
                     WAILTFADGAVINLGVSYALPARYPTLGQSDRLELLGSEGTMIIDDDHLDHLLFSQKG
                     IPHAYVPDHSVDMAFLGSNTAGDWAVGDFWGPLGNETRAWLDHLATGAPTIHTTPEQA
                     RINLETTIAIERAAASGRTVRLPLQMEDESESRSV"
     gene            complement(2526..>2941)
                     /locus_tag="VIQ50_02665"
     CDS             complement(2526..>2941)
                     /locus_tag="VIQ50_02665"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HEY9359310.1"
                     /translation="IAIGADEGIHSLDDIRRHHEHGAARGVSLKAIKLGGMRGAAAAG
                     RLCEQLGLNVNVSAKTGESSIACAAATHIAAALPQIAWGLTLTNEGLAEDVTAQGVRI
                     ARGHVEVCDRPGLGIDVDEDKVRRYRRDVPVRQVA"
BASE COUNT          487 a          977 c          949 g          528 t
ORIGIN      
        1 gccgcggtga tgaacaagtc gctgcgctac gacacgctct ccgcattcga tccggtgtcg
       61 caggtcgcaa ccgccggctt gatcatcgtc actcgtcccg actttcccgc cgatgacgtc
      121 aaacaattgg tcgccgccgc caaggccaat cccggcaaga tcgccttcgc cagcccgggc
      181 ttcggcgcca cgcagcatct gactgccgaa ttgttccgcc agaccaccgg tatcgacgtt
      241 ttgcatgtgc cgttccgtac ctcgcccgag gcaatctccg cgctgctcgg caagcaggtc
      301 gacgtcgtgt tcgagacggt gtccgccgtg ctcggccaag ttcagtcggg ccagctcaag
      361 gcgctcgcgg tcaccggcag agagcgcttt ccggcagtgc ccgacgtgcc gacggcaatc
      421 gaatcgggcg tgcttcccgg ctatgatgtg acgacctggt acggcgtatt cgccccgcgt
      481 ggcgtgccgc cggaaaccat cgccaagctg aataaggcga tcaacgaaag tctcgccgag
      541 gaagtcgtgc aaaagcgctt gaccaccgcc ggcgtcctgg tgcgcggctc gacgcccgag
      601 gccttcggcg agcacatggt gcgggaattt gcacgctgga acgccgtgcg cgaggccgcc
      661 ggcatcccgc agcagtagca tcgtcggcta catgatgcat tttcatgttg actacgatat
      721 gcgtcggtac tacaagattc gcagcctcgc tcactgaggg cgtgttctag agacgatccg
      781 agagggcaat cacttggatt gtgcgcaagg ccaactagca gttgtggcaa aagatcgccg
      841 acgagagtgt cctgtttccg gcctgttctt tacagggacc tgcgcaactt gaacgtgtcg
      901 gaccgtgagc gcgcttcgcc gatcgccctt gtctcacgcc gccccacgct cgcgcagcac
      961 gtcgaaagca atgcgatggc cctcgttcgc tgccgggatc ccgcaataga gcgcgactag
     1021 cagcagaatc tcgcggatct cctcggcggt gcagccgttg gtgagcgcgc cgttgacgtg
     1081 gacgcgaagc tcgttcgcgc gtccgatcgc cgctgtcatc gcgaccgccg ccagcgattt
     1141 cgtcttgagc ggcagcccgg ggcggctcca gatgtcgcca taggcatagg cgttgatcac
     1201 ggtctgcagc ggctctccga acgcgccgaa ggcattcatg cgctgctcga cggcctcgcg
     1261 gccgaacatc tcgcggcgaa gtttcaatcc cttgtcgtgc aggtcgcgcg tgtccatcgc
     1321 ttttctccat aacaaacgag aaggtcattg ccgggatagg gcgtgggcaa gggcgccagc
     1381 attaaacaga tcgagattcg ctctcatcct ccatctgcag cggcagccgc acggttcggc
     1441 ccgaggccgc cgcgcgctcg atggcgatgg tcgtctcgag attgatgcgc gcctgctccg
     1501 gcgtcgtgtg gatcgtcggc gcgccggtgg cgagatgatc gagccaggcg cgcgtctcgt
     1561 tgccgagcgg gccccagaaa tcgccgaccg cccaatcgcc cgcggtattg ctgccgagaa
     1621 acgccatgtc gacgctgtgg tcgggcacat aggcgtgggg aatgcccttc tgcgagaaca
     1681 gcaggtgatc gaggtgatcg tcgtcgatga tcatcgtgcc ctcgctgccg agcagctcca
     1741 agcggtcgga ttgcccgagc gtcggatagc gcgcgggcaa cgcgtagctc acgccgagat
     1801 tgatcaccgc gccgtcggca aaggtcagga tcgcccaggt cacgtcgtgc gcgccgtagc
     1861 cggcctcctt gaatatgccg tgctgtccgc gcgccaccac ctcgactggc cggttgccct
     1921 ccaggaacca gcacatcaga tcgacgtaat aggtgagcac gtcgagcacc ggcgtcgcat
     1981 gcggatcgcg cttgagaatt gcgaaggcct gcgcgcgcga attgtagaca cgcgccatgc
     2041 cgccgacgac cttgccgaga cggccgtgcc gcatctgctc cttggcgcgc aggaagcact
     2101 ccttgtagcg gcggctgtaa ccgaccctca gctcgccctt ggtggcgcgc aaggtgtcga
     2161 ggatcttgtc ggcgtcgcgc agcgaaaatc cgatcggctt ttcgaccagc accggcttgc
     2221 cgagctccaa ggcgtgcagg acgggtggcg tgtgctgctg ctccggtgtc gagacgatga
     2281 cggcggtgac tcgcggatgc gcgatcacct cctcgttgct gccgctgtgg aaatcggcgc
     2341 cggccgtctc agcgagcgcg cgggcgcgga caggatcgcg atcggaaacc gcaaggaaac
     2401 gcactgcggg atgcttggcg gcaagctgcg cgcgcaaggt gccgatgcgt ccggacccga
     2461 ccacggcgat gccgatattg tcctgcttca tccacagccc catcgccccg cgcaggcgat
     2521 cctcgttacg ccacttgccg caccggaacg tcgcggcgat agcggcgcac cttgtcctcg
     2581 tcgacgtcga tccccagccc cggacgatcg cagacctcca catgtccgcg cgcgatgcgc
     2641 acgccttgcg cggtgacatc ctcggcgagg ccctcgttgg tcagcgtcag cccccacgcg
     2701 atctgcggca gcgcggcggc gatgtgggtg gccgctgcgc aggcgatgct ggattcgccg
     2761 gtcttggcgg agacgttgac gttgagcccg agctgctcgc acagccgccc ggctgcggcc
     2821 gcgccgcgca ttccaccgag cttgatggcc ttcaggctta ccccgcgcgc ggccccatgc
     2881 tcgtggtggc ggcggatgtc gtcgagggaa tggatgccct cgtcggcgcc gatcgcgatc
     2941 t
//
LOCUS       DATCWM010000143         3210 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_211769, whole genome shotgun sequence.
ACCESSION   DATCWM010000143 DATCWM010000000
VERSION     DATCWM010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3210)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3210)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3210
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_211769"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..776)
                     /locus_tag="VIQ50_02670"
     CDS             complement(<1..776)
                     /locus_tag="VIQ50_02670"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF012678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HEY9359311.1"
                     /translation="MVASFIHDIQGQRVVFAPGALVRTADEAAHLGLSRALVIATPGS
                     GARLGGRLIEILGPRAAGLHAQAMLHVPKPVAEAGIAAARGADGLIAAGGGAAIGLAK
                     IIARDLGLPIIAVPTTYSGSEATAIWGLSDGERKFTGKDARVLPRTIVYDPELTLALP
                     ASVSAASGMNAIAHCVEALWVTERTPFLMALASDALRRFAVHLPRVVADGTDREARAE
                     CLVAAWLAGVVLASGTALQHKLAHVLGGLGLPHAEAHAIIL"
     gene            889..1314
                     /locus_tag="VIQ50_02675"
     CDS             889..1314
                     /locus_tag="VIQ50_02675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007592779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SgcJ/EcaC family oxidoreductase"
                     /protein_id="HEY9359312.1"
                     /translation="MRRIAPVIAFLAALIVPAFAQKPEIEAVNAKWIECFNKGDFAGV
                     ASLYTDDATAFPPGSGMVKGRAAIEAMWKNMAEQVTDPKLITVDVKALGPSAAREIGT
                     FSLKTKGPRPQEVIGKYLVVWEKVGSEWKLAADIWNDGK"
     gene            complement(1412..2497)
                     /gene="gtdA"
                     /locus_tag="VIQ50_02680"
     CDS             complement(1412..2497)
                     /gene="gtdA"
                     /locus_tag="VIQ50_02680"
                     /EC_number="1.13.11.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047922 - gentisate 1,2-dioxygenase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gentisate 1,2-dioxygenase"
                     /protein_id="HEY9359313.1"
                     /translation="MASATASKPAESTAPSPKHNIEAMREAYYQRIAKHDMTPLWKVM
                     KNVVTKEPVTRCRPVIWHYDDINRLVMESGPLITAEEAERRVLILENPGMRGESKATN
                     TLFAGVQMILPGEVAPAHRHVSSAIRFVLDGEGAYTAVEGEKAYMAPGDFVITANWAP
                     HDHGNTSDKPMLWLDVLDFPQVNFFETSFAEQFGSATQPTNRADGDSLSFYGSGVLPD
                     GAPAALNRSPVINYTYARTRPIIERMLKAGDVDKRHGARVRYANPINGGPVLPTMGAY
                     LALLPKGFKGETYRATDATIFVCAEGQGATTVEDEALEWGPNDVFVVPPWKHYSHRAS
                     KESVLFSISDRPAQEALGIWREDTGAH"
     gene            complement(2598..>3210)
                     /locus_tag="VIQ50_02685"
     CDS             complement(2598..>3210)
                     /locus_tag="VIQ50_02685"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY9359314.1"
                     /translation="GANSVASAIADVSDETAVRGLVAATMERFGKIDVLVNNAALFAP
                     LQEEKCTDIDAALWDKVMAVNLRGPFLMVKHVVPHMTAQGYGKIINIGSGTAFRGIPW
                     MLHYVTSKGGIMAFTRALARELGGHGICVNTLAPGFTLSDTVLSENPGHVKTARERAV
                     QSRSLRRDEHPQDLLGALVFLASAESDFVTGQTLAVDGGNVNT"
BASE COUNT          572 a         1050 c         1026 g          562 t
ORIGIN      
        1 agaatgatcg cgtgggcctc ggcatgcggc aacccgaggc ctccgagcac gtgcgcgagc
       61 ttgtgctgca gggcggtgcc cgaggcgagc acgacaccgg caagccaggc agcgacgaga
      121 cactccgcac gcgcttcacg atcggtgccg tcggcgacga cgcgcggcaa atgcacggcg
      181 aaccggcgca gcgcatcgct cgccagcgcc atgaggaacg gcgtgcgctc cgtcacccac
      241 agcgcttcca cgcagtgcgc gatcgcattc atgccgctcg ctgcgctcac cgaggccggg
      301 agcgccagcg tgagctccgg atcgtagacg atcgtgcgcg gcaggacgcg agcgtccttg
      361 ccggtgaatt ttcgctcgcc gtcgctcagc ccccaaatcg ccgtcgcttc cgatccggaa
      421 tacgtggtcg gcaccgcgat gatcggcagg ccgagatcgc gagcgatgat cttggcaagg
      481 ccgatggcgg cgccgccgcc ggcggcgatg aggccatcgg cgccgcgcgc ggccgctatc
      541 cccgcttccg caaccggctt cggcacgtgc agcatggcct gcgcatggag ccccgccgcg
      601 cgggggccca aaatttcgat gaggcggccg ccgagccgcg cgccgctgcc tggcgttgcg
      661 atcaccagcg cccggctcaa gccgagatgc gccgcttcgt cggcggtacg cacgagcgcg
      721 cccggcgcga acacgacgcg ctgcccttgg atatcgtgaa tgaaagatgc gaccatccga
      781 cgcgttgccc tgcacgccgt tgccctgtcc cgcagtagtc attgtaactc gccttggccg
      841 gcgcgtcgtg caaatatcca cagtcactca aaatcgaggg ccatactcat gcgcaggatc
      901 gcaccggtca ttgcctttct tgccgcgctg attgtaccgg cgttcgcgca gaagccggag
      961 atcgaggcgg tgaacgccaa gtggatcgaa tgcttcaaca agggtgattt tgccggtgtc
     1021 gcctcgctct acactgacga cgcgaccgca ttcccgccgg ggtccggcat ggtcaagggc
     1081 agagctgcga tcgaggcaat gtggaagaac atggcggagc aagtcaccga tccgaaactt
     1141 ataaccgtcg acgtgaaggc actcggccct tccgcggcgc gcgagatcgg gaccttcagc
     1201 ctcaagacca aaggtccgag accgcaggaa gttatcggca agtatctcgt ggtgtgggag
     1261 aaggtcggaa gcgagtggaa gctcgccgcc gatatctgga acgacggcaa gtagctcgcg
     1321 accctaagtg tcgcggtaca gaccgcagat cacctatcgc cgacccaccc gccagcaacc
     1381 ctccgcggcg agacgatcac atgaaccgcg gctagtgcgc cccggtatcc tcgcgccaga
     1441 ttccaagcgc ctcctgcgcc ggccggtcgg agatcgagaa cagcaccgat tccttgctcg
     1501 cccggtgcga atagtgcttc cacggcggca ccacgaagac atcgttggga ccccattcca
     1561 gcgcctcgtc ctcgaccgtg gtggcgccct gcccttccgc gcagacgaag atggtggcgt
     1621 cggtcgcgcg gtatgtctcg cctttgaagc ctttgggtaa gagggcaaga tacgcgccca
     1681 tggtcggcag caccggacca ccattgatcg ggttggcgta gcgcacgcgc gcgccatggc
     1741 gcttgtcgac gtcgccggct ttgagcatgc gctcgatgat cggccgagtg cgggcgtagg
     1801 tgtagttgat cacggggctg cggttgagcg cggccggcgc gccgtcgggt aggacgcccg
     1861 acccatagaa gctgagcgaa tccccgtccg cccggttggt cggctgcgtc gcgctgccga
     1921 actgctcggc gaacgaggtc tcgaagaaat tgacctgcgg aaagtcgagc acgtcgagcc
     1981 aaagcatggg cttgtcggag gtgttgccgt ggtcatgcgg agcccaattg gcggtgatga
     2041 cgaaatcgcc cggcgccatg taggcctttt cgccctcgac cgcggtatag gcgccctctc
     2101 cgtcgagcac gaagcggatg gccgaggaaa cgtgacggtg ggcgggggca acctcgcctg
     2161 ggaggatcat ctgcacaccg gcgaacagcg tgttggtcgc tttcgattcg ccgcgcattc
     2221 caggattttc caggatcaat acgcgccgct ccgcctcctc ggcggtgatg agcgggccgg
     2281 attccatcac caggcggttg atgtcgtcgt agtgccagat caccggccgg cagcgcgtca
     2341 ccggctcctt agtgacgaca ttcttcatca ccttccacaa cggcgtcatg tcgtgcttgg
     2401 cgatgcgctg ataataggcc tcccgcatcg cctcgatgtt gtgcttgggg ctcggagccg
     2461 tgctctcggc tggcttactc gcggtcgcgc tcgccatggc gctctccatt gttcgtataa
     2521 gcgggtttgg atcgacaata atccaaaccg gcaaattagt atataatgaa actatctccc
     2581 cgctgaagcc cggaagatca ggtattcacg ttgccgccgt cgaccgcgag cgtctggccg
     2641 gtgacgaaat cgctctccgc cgacgcgagg aaaacgagcg cgccaaggag gtcctgggga
     2701 tgctcgtcgc gccgcagcga gcgcgactgc acggcgcgct cgcgtgcggt cttcacatga
     2761 ccggggttct cgctcagcac tgtgtcgctc aaggtgaaac ccggcgccag cgtgttgacg
     2821 caaataccgt gcccaccgag ctcccgcgcg agcgcgcgtg taaacgccat gattccgccc
     2881 ttgctggtca cgtagtgcag catccagggg atgccgcgga acgccgtgcc ggagccgata
     2941 ttgatgatct tgccgtaacc ctgcgcggtc atgtgcggga caacatgctt gaccatcagg
     3001 aacggtcccc gcaggttgac cgccatcacc ttgtcccaca gcgctgcgtc gatgtcagtg
     3061 cacttctctt cctgcagcgg tgcaaacagt gccgcgttgt tgaccaggac gtcgatctta
     3121 ccgaaacgct ccatggtcgc cgcgaccagg cctctcaccg ccgtttcgtc actgacgtcg
     3181 gcgatggcgc tcgcgaccga gttcgcccca
//
LOCUS       DATCWM010000144         4764 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_260425, whole genome shotgun sequence.
ACCESSION   DATCWM010000144 DATCWM010000000
VERSION     DATCWM010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4764
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_260425"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..184
                     /locus_tag="VIQ50_02690"
     CDS             <1..184
                     /locus_tag="VIQ50_02690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019906139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HEY9359315.1"
                     /translation="EAAWSAVQGLLDAWARTPADDFPNYAAGSAGPAAADRLLARDGH
                     AWLPIRAEHHHPGHST"
     gene            276..563
                     /locus_tag="VIQ50_02695"
                     /pseudo
     CDS             276..563
                     /locus_tag="VIQ50_02695"
                     /inference="COORDINATES: protein motif:HMM:NF013116.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase family protein"
     gene            559..1362
                     /locus_tag="VIQ50_02700"
     CDS             559..1362
                     /locus_tag="VIQ50_02700"
                     /inference="COORDINATES: protein motif:HMM:NF013116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase family protein"
                     /protein_id="HEY9359316.1"
                     /translation="MTAPAAWTVGFRWKSRRCWRTITKSTIAEAKELHAQASRPNLFI
                     KIPGTAEGLPAIEEAIFAGVPVNVTLLFSEDQYVAAANAFMRGIERRIEAGLRPDVAS
                     VASVFISRWDVAVTGKVPKALNDRLGIAVAKRTYKAYLGLLSSPRWMRAYNAGARPQR
                     LLWASTGTKDPEASDVLYIKGLAAPFTVNTMPEGTLKALADHGDVGATLPADGGNADE
                     ELARFADAKIDVDALATQLQDDGAKSFVKSWNELMGVIGSKSETLKRAS"
     gene            1454..2134
                     /locus_tag="VIQ50_02705"
     CDS             1454..2134
                     /locus_tag="VIQ50_02705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEY9359317.1"
                     /translation="MLVVDVGGSSVKILATGHNERRSFASGPKMTPGQMVAGVKKLAR
                     DWSYGVVSIGYPGPVLHGCPIAEPHNLGRGWVGFDFAAAFGRPVQVVNDAAMQALGSY
                     NGGKMLFIGLGTGFGSAMVVNGIVEPMELGHLPYKKGVYEDYVGLHGLERYGKKKWGR
                     HVFDVVAHFIAALEPDDTVIGGGNVKMLDALPPHSRAGDNDNAFCGGFRLWQRPQPHA
                     GARPKPRS"
     gene            2158..3816
                     /gene="pgi"
                     /locus_tag="VIQ50_02710"
     CDS             2158..3816
                     /gene="pgi"
                     /locus_tag="VIQ50_02710"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004347 - glucose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEY9359318.1"
                     /translation="MVATSETDRLRTADRLGAWQALETHYEGMRNRQMRDLFAREPGR
                     GERMTAEAAGVFLDYSKNRVDEETLSLLVALAEQSGLRERIDAMFRGEKINVTENRAV
                     LHVALRAPRGASIIVDGKNVVPEVHAVLDKMADFANRVRGGQWKGHTGKRIRNVINIG
                     IGGSDLGPVMAYEALRYYSDRAMTFRFVSNVDGTDFVEATRDLDAAETLFIISSKTFT
                     TLETMTNAQSARDWSLRGLGGDAKAVAKHFVAVSTNAEKVAEFGIDTANMFEFWDWVG
                     GRYSMDSAIGLSTMVAIGPDHFHAMLEGFHAVDEHFRSAPFARNLPVLMGLLGVWYND
                     FFGAQTVAVLPYDQYLKRFPAYLQQLTMESNGKHVTLAGMPVGHQTGPVYWGEPGTNG
                     QHSFYQLIHQGTRLVPCDFIAFAHPLNQLGRHHDMLLANVFAQTEALAFGKTREQVKA
                     EGTPDWLVPHRVFEGNRPSNTILLDRLTPAALGKLVALYEHSVFTQGTIWDIDSFDQW
                     GVELGKVLAQRIIPELESKSEPKLGHDSSTNNLIRRYRKLKGAT"
     gene            3813..4484
                     /gene="rpe"
                     /locus_tag="VIQ50_02715"
     CDS             3813..4484
                     /gene="rpe"
                     /locus_tag="VIQ50_02715"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEY9359319.1"
                     /translation="MTTGAIKLAPSILAADFARLGDQVAEAERAGADRIHVDVMDGHF
                     VPNLSMGAEIVQSLRKVTRLPLETHLMIFNPDLFLDEFAQAGSDSFLVHWEGNTDVSR
                     TVQRIKGLGKSAGVAINPATSAAVLEEILPDLDQVLVMTVNPGFGHQHFLRTTLPKIA
                     RAREMIERIKPGCGLEVDGGIDATTAPLAVDAGADVLVAGSAIFNDGESVAVAMQRLR
                     AALKH"
     gene            4498..>4764
                     /locus_tag="VIQ50_02720"
     CDS             4498..>4764
                     /locus_tag="VIQ50_02720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011653425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEY9359320.1"
                     /translation="MQLAMIGLGRMGANMVRRLIKGGHQCVVFDMSPQAVADLARDKA
                     LPATSLADLVRKLEKPRAVWLMVPAAVVDKTIVDLVPHLERGDIL"
BASE COUNT          927 a         1480 c         1522 g          835 t
ORIGIN      
        1 cgaggcggcg tggtccgccg ttcaggggct gctggatgcg tgggcccgca ctcccgccga
       61 cgatttcccc aattacgcgg ccggtagcgc cggacccgcc gccgcggatc gcctgctcgc
      121 ccgcgatggg catgcatggc tgccgatcag ggccgagcat caccacccgg ggcacagcac
      181 atgagagcct tgagtcgtga tcgtatcgcc ccgaacgagg ccaaagcggt tgaatctaac
      241 ttaccaaggt cgggggacgc gatggaggtg acatcatgaa agccactcgc atcctgcacg
      301 acttgggcca gagcctctgg ctcgacaaca tcacgcggaa tttgttgaac acgggcgtgc
      361 tgcgccgcta tatcgacgaa ctctcggtta ccgggttgac ctcgaacccg acgatcttcg
      421 accacgcgat caagaacagc cgcgactacg acgaggcaat caaacacaag ctcgccgagg
      481 gcaagtcggg ggaaaagctc ttcttcgagc tcgcgctgga tgacctcagg caggcggcgg
      541 acctgttccg cccgattcat gaccgcacct gcggcgtgga cggttgggtt tcgctggaag
      601 tctcgccgct gttggcgcac gattaccaag tcgacgattg ccgaggccaa ggagttgcac
      661 gcgcaggcaa gccgtccaaa cctcttcatc aaaattccgg gtactgccga gggtctgccg
      721 gccatcgagg aggcgatctt tgcgggggtg ccggtcaacg tcacgctctt gttctccgag
      781 gatcagtacg tggcggccgc caatgcattc atgcgcggca tcgagcggcg catcgaagcg
      841 ggattgagac ccgatgtcgc atcggtggca tcggtcttca tcagccgctg ggatgtcgcg
      901 gtgactggga aggtgccgaa agcgctcaac gatcggctgg gcatcgccgt cgccaagcga
      961 acctacaagg cgtatctcgg cttattgagc tcgccgcgct ggatgcgcgc ctataatgct
     1021 ggcgcgcgcc cgcagcgcct actctgggca agcactggga ccaaggatcc ggaggcttcg
     1081 gatgtcctct acatcaaggg cctcgccgcg ccgttcaccg tgaacaccat gcccgagggc
     1141 acgttgaaag cgctcgccga ccatggtgac gtcggcgcaa cgctacccgc cgacggtggc
     1201 aacgccgacg aggagctggc ccgattcgcg gatgcgaaga tcgacgtcga tgcattggcg
     1261 acacagcttc aagacgatgg cgccaaatcc ttcgtcaagt cctggaatga gctgatgggc
     1321 gtgattggct cgaaatctga aacactcaaa cgagcgagct agcgctgtgt acgccaagac
     1381 ggagcgttcc gctcggcgtc gcaaggcgcg gccgcatcga accgaggtcg cgaagagctc
     1441 ctcggggagg aaggtgttgg tcgtcgacgt gggcggaagc tcggtcaaga tcttggccac
     1501 gggacacaac gagcggcgat cgtttgcatc cgggccaaag atgacccccg ggcagatggt
     1561 cgccggagtg aagaaactgg cgcgggattg gagctacggc gtcgtctcga tcggctatcc
     1621 aggcccggtt ctgcacggct gtccaatcgc tgaaccccac aacctcgggc gcggatgggt
     1681 cgggttcgat ttcgcagcag ccttcggtcg gccggtacaa gtcgtcaatg acgcagccat
     1741 gcaggccttg ggcagctaca acggcggcaa aatgctcttt atcggccttg gaaccggctt
     1801 tgggtcggcc atggtcgtaa acggcatcgt cgagcccatg gagctcggcc acctgccgta
     1861 caagaaaggc gtctatgagg actatgtggg tctgcacggg ctcgagcgtt acggcaagaa
     1921 gaaatggggc cgtcacgtgt tcgatgtcgt cgcgcatttc atcgctgcgc tggagcccga
     1981 cgacaccgtg atcggcggcg gcaacgtcaa aatgctggat gcgctgccgc cccattcccg
     2041 cgccggcgat aacgataatg ccttctgcgg cggatttcgg ctctggcagc gccctcagcc
     2101 gcacgccggc gctcgcccga aaccacggtc ttgaacgatc agcgaagggt tccggagatg
     2161 gttgcaacat cggagacaga tcgcctgcga acggccgaca ggctcggcgc atggcaagct
     2221 ctcgaaactc actatgaggg aatgcgcaac cgacagatgc gagacctgtt cgcgcgcgag
     2281 cccgggcggg gcgagcggat gacggccgag gccgccggcg tcttcctcga ttattcgaaa
     2341 aaccgagtcg acgaggagac gctgagccta ctcgtcgcgc ttgccgagca atccggcctg
     2401 cgcgagagga tcgacgcgat gtttcgcggc gaaaagatca acgtcacgga aaaccgcgcg
     2461 gtcctgcacg tggcgttgcg cgcgccgaga ggcgcttcga tcatcgtcga cggaaagaat
     2521 gtcgtgccgg aggtccacgc cgtgctcgac aagatggccg acttcgccaa tcgcgttcgc
     2581 ggcggccaat ggaaaggaca taccgggaag cgcattcgca acgtgatcaa tatcggtatc
     2641 ggcggctcgg acctcgggcc ggtgatggcg tacgaggcgc tccgatacta cagcgaccgt
     2701 gccatgacgt tccgcttcgt gtccaacgtc gacggaacgg atttcgtcga ggcgacgcgc
     2761 gacctcgacg cggcggagac gctgttcatc atctcctcga agacctttac cacgctggag
     2821 acgatgacca acgcgcagag cgctcgcgat tggtcgctac gcggcctcgg cggcgatgcc
     2881 aaagcggtcg caaaacattt cgtcgccgtc tcaacgaacg cagagaaggt cgcggaattc
     2941 ggcatcgata ccgccaacat gttcgagttc tgggattggg tcggcggacg ctactcgatg
     3001 gactccgcga tcggcctttc caccatggtt gcgatcggcc cggatcactt ccacgccatg
     3061 ctcgagggct tccacgcggt cgacgaacat ttccgcagcg cgccgttcgc gcgcaacctg
     3121 ccggtgctca tgggtctgct cggcgtctgg tataacgact tcttcggcgc gcagaccgtc
     3181 gcggtgctgc cgtacgacca atatctgaag cgtttcccag cctacctcca gcaattgacg
     3241 atggagagca acggcaagca tgtaacgctc gccggaatgc cggtcgggca tcagaccggt
     3301 ccggtctact ggggtgagcc gggcactaac ggtcaacact cgttctatca attgatccac
     3361 cagggcactc ggctggtgcc ttgcgacttc atcgccttcg cccacccgct caaccaactc
     3421 ggccgtcacc acgacatgct gctggcgaac gttttcgcgc agaccgaggc gctcgctttc
     3481 ggcaagacgc gcgaacaggt caaggccgaa gggacgccgg attggctcgt cccgcaccgg
     3541 gtattcgaag gcaatcggcc gtccaacacg atcctgctgg atcgcttgac gccggcggcg
     3601 ctcggcaagc tcgtcgcctt gtacgagcac agcgtcttca cccaggggac gatctgggac
     3661 atcgattcgt tcgatcagtg gggtgtcgaa ctcggcaagg tcctcgccca gcgcatcatc
     3721 ccggagctgg aaagcaagag cgaacccaag ctcggccatg acagctcgac caacaacctg
     3781 atccgcagat atcgcaagct caagggcgca acgtgacgac cggcgcaatc aagctcgctc
     3841 cctcgatcct cgcggccgat ttcgcccgct tgggcgatca ggtggccgag gccgagcgtg
     3901 ccggcgccga ccgaatccac gtcgacgtga tggacggaca cttcgtgccg aatctttcga
     3961 tgggcgcgga gatcgtgcaa tcgctgcgaa aagtgacgcg cctgccgctc gagacgcacc
     4021 tgatgatttt caatcccgat ttgttcctcg acgaattcgc gcaggccggg agcgactcgt
     4081 ttctggtgca ttgggaagga aacaccgatg tctcgcgaac cgtgcagcgc attaagggct
     4141 tgggaaaatc ggccggcgtc gccatcaacc cggcgacctc cgcggccgtg ctcgaggaga
     4201 tcctgcccga tcttgaccag gtcctggtca tgaccgtgaa cccgggattc ggccaccagc
     4261 acttcctgcg cacgacactg ccgaagattg ctcgcgcccg cgagatgatc gagcgaatca
     4321 agccggggtg cggcctcgag gtggacgggg gaatcgacgc gacgaccgcg ccgctggcgg
     4381 ttgacgcagg cgccgatgtg ctggtcgccg ggtcggcgat tttcaacgac ggcgaaagcg
     4441 ttgccgtcgc catgcagcgg ctgcgggccg ccctcaaaca ttaacggaga aaaagtcatg
     4501 cagcttgcga tgatcggatt gggtcggatg ggcgccaaca tggtgcgacg cctcatcaag
     4561 ggtggccatc agtgcgtggt cttcgacatg tcgccacagg cggtcgcgga tttggcgcgg
     4621 gacaaggcgc tccctgctac ctcgcttgcc gacctcgtgc gcaagctgga gaagccgcgc
     4681 gccgtgtggc ttatggtgcc ggcggcggtc gtagacaaga ccatcgtcga ccttgtcccg
     4741 cacctcgagc gcggcgatat cctc
//
LOCUS       DATCWM010000145         3134 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_39127, whole genome shotgun sequence.
ACCESSION   DATCWM010000145 DATCWM010000000
VERSION     DATCWM010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3134
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39127"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..177)
                     /gene="amrB"
                     /locus_tag="VIQ50_02725"
     CDS             complement(<1..177)
                     /gene="amrB"
                     /locus_tag="VIQ50_02725"
                     /inference="COORDINATES: protein motif:HMM:TIGR04336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AmmeMemoRadiSam system protein B"
                     /protein_id="HEY9359321.1"
                     /translation="MPHALEHLLEVELPFLQALLPSFALVPLVIGDATAHDVAEVLRR
                     LWGGPETAIVVSSDL"
     gene            complement(202..648)
                     /locus_tag="VIQ50_02730"
     CDS             complement(202..648)
                     /locus_tag="VIQ50_02730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020049099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HEY9359322.1"
                     /translation="MSKATEVPFATTLFVRDTCLCLHLQRAARALARRFDDALRPLSL
                     TSGQYSMMMALNQPAPPTIGVVASILCVDRTTLTAALKPLKRRGLVTVTVDNSDRRSR
                     RLKLTAAGRGLLARAVPVWRRTHAEIDRLVPDDGAERLRRDLRALA"
     gene            774..932
                     /locus_tag="VIQ50_02735"
                     /pseudo
     CDS             774..932
                     /locus_tag="VIQ50_02735"
                     /inference="COORDINATES: protein motif:HMM:NF017771.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF899 family protein"
     gene            997..1527
                     /locus_tag="VIQ50_02740"
     CDS             997..1527
                     /locus_tag="VIQ50_02740"
                     /inference="COORDINATES: protein motif:HMM:NF017771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF899 family protein"
                     /protein_id="HEY9359323.1"
                     /translation="MWRWDLGQGCASCSFFADHVDGANLHLANHDVTFVAISRGRLAD
                     LEAYRKRLGWRFKLISSYGSDFNYDYHVSFTKEELAQGKIYYNYATIEDEKYLSDELP
                     GFSVFCKDEHGEVFHTYSSYARGGDLLLGAYNFLDLTPTGRNEREIMDWVKRNDEYEA
                     EAAQTDCHPQARTSAA"
     gene            1589..2077
                     /locus_tag="VIQ50_02745"
     CDS             1589..2077
                     /locus_tag="VIQ50_02745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY9359324.1"
                     /translation="MTAHGITPCLWFDTQAEEAAKFYASVFKDAKIGKTSRYGNEGVE
                     VHGKQPGTVMTVAFEIAGQKFLALNGGPHFKFNEAVSFQVHCETQEEIDYFWSRLAEG
                     GEEGPCGWLKDKFGLSWQVIPTALPQMLMDENSDKAQRVMRSMLQMRKIDLAALKRAQ
                     AA"
     gene            2121..2534
                     /locus_tag="VIQ50_02750"
     CDS             2121..2534
                     /locus_tag="VIQ50_02750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY9359325.1"
                     /translation="MPVTPYLFFDGRCEEALDFYKKALGAEVEMMMRYKESPEPPPPG
                     MVPPGSENKIMHSCFRVGDAPVMASDGCAQGKPKFEGFSLSLNAKDEADADRMFKALS
                     AGGEVRMPLGKTFFAKRFGMVADRFGVGWMVIVEP"
     gene            2748..3107
                     /locus_tag="VIQ50_02755"
     CDS             2748..3107
                     /locus_tag="VIQ50_02755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1428 domain-containing protein"
                     /protein_id="HEY9359326.1"
                     /translation="MSYVDGFVVPVRKRDLAAYRRMAKTAGKVWREHGALEFRESIAD
                     DVSWGKRTSFPRSVKQKSGETVVFSYIVYKSRADRDRINAKVMKDKRLAKMMELKALP
                     FDAKRMIWGGFKTVVAL"
BASE COUNT          632 a          946 c         1038 g          518 t
ORIGIN      
        1 aagatcggag ctgaccacga tcgccgtttc tggcccgccc cagagccgcc gcagcacctc
       61 cgcgacgtcg tgcgcagtcg catcgccgat caccagcggc accagcgcga atgacggcaa
      121 cagcgcctgc aggaagggaa gttcaacctc gagcaaatgc tccagcgcat gaggcacgac
      181 tgcgcacggc gcacgcggcc ttcacgcgag cgcgcgcagg tcgcgccgca ggcgctccgc
      241 gccgtcgtcc ggaacgaggc ggtcgatctc ggcatgggtg cgccgccaga cggggacagc
      301 gcgcgcgagc agcccccggc cggcggcggt gagcttgagc cggcgactgc gccggtcgct
      361 gttatcgact gtcaccgtga cgaggccgcg ccgtttgagc ggcttgagcg cggcggtgag
      421 cgtcgtgcgg tccacgcaga ggatcgacgc gaccaccccg atggtcggcg gcgcaggttg
      481 gttcagcgcc atcatcatgg agtactgccc gctggttagg ctgagcgggc gcaacgcgtc
      541 gtcgaaccgc cgcgccagcg cccgcgccgc gcgctgcagg tgaaggcaca ggcaggtgtc
      601 gcggacgaat agtgtggtcg cgaagggaac ttcggttgcc tttgacacgc cacaattatg
      661 ttgatatcaa cctattctgt caatcgaggg cggcgcgcga aaatcgcgcc gctgtttacg
      721 tcgcgtaatc agatggagcg ccgatgagca agaactcgag ccgagagcaa acgatgcagc
      781 atcgcgtggt atcgcgggag gagtggctcg ccgcacgcaa ggcgcacctc aagagcgaga
      841 aggcgctcac gcggatgcgc gatctcgtcg ccgccgagcg gcgcgcgctg ccttgggtca
      901 aggttgagaa gaaatatgtc ttcgatacgc ccgagggcca aaagaccctc gcgcagctgt
      961 ttgaagggcg cagccaactg atcgtctatc attttcatgt ggcgatggga tttgggccag
     1021 ggttgcgcca gttgctcgtt cttcgccgac cacgtcgacg gcgccaacct tcacctcgcc
     1081 aaccacgatg tcactttcgt cgcgatctcg cgcgggcggc tcgctgacct cgaggcctat
     1141 cgcaaacggt tggggtggcg cttcaagctt atctcgtcct acggcagtga cttcaattat
     1201 gactatcacg tgtcattcac gaaggaggaa ctcgcgcagg gcaagatcta ctacaattat
     1261 gccacgatcg aagacgagaa gtacctgtcc gacgagctgc cgggcttcag cgtattctgc
     1321 aaggatgagc acggcgaggt gtttcatacc tactcgtcat atgcgcgcgg cggcgacttg
     1381 ctgctcggcg cctacaactt tctcgacctc acgccgacgg gccgcaacga gagagagatc
     1441 atggattggg tgaagcgcaa cgacgagtat gaagccgaag cggcgcaaac cgattgtcac
     1501 ccgcaagcgc ggacgagtgc ggcttaaagc cgcgcattcg acccgccgca aatcaaacgc
     1561 gcagacctga aaggagcaga tcgtgtcgat gacagcacac gggatcacgc cctgcctgtg
     1621 gttcgatacg caggccgagg aggcggccaa gttctacgcc tctgtcttca aggacgcgaa
     1681 gatcggaaag accagccgct acggaaacga gggagtcgag gtccacggca agcagccggg
     1741 aacggtcatg accgtcgcct tcgagatcgc ggggcagaag tttctggcgc tcaacggcgg
     1801 cccgcacttc aagttcaacg aagcggtgtc gttccaggtc cactgcgaaa cccaggagga
     1861 aatagactac ttctggagca ggctcgccga aggcggcgag gaggggccct gcggttggct
     1921 caaggacaag ttcggcctgt cgtggcaggt cattccgacg gcgctgccgc agatgctcat
     1981 ggatgagaat tccgacaagg cgcaacgagt catgcggtcg atgttgcaga tgcgcaagat
     2041 cgaccttgcg gcattgaagc gggcgcaggc cgcgtgaacg ccggtagttt caatatcgaa
     2101 aaccccgaaa ggagagagtc atgccagtga caccgtacct gttcttcgac ggccgctgcg
     2161 aggaagcgct cgacttctac aagaaagcgc ttggcgccga ggtcgaaatg atgatgcgct
     2221 acaaggaaag cccggagccg ccgccgcccg gcatggttcc gcccggcagc gagaacaaaa
     2281 tcatgcattc gtgttttcgc gtcggcgatg cgccggtgat ggcatccgac ggctgcgcgc
     2341 aaggcaagcc gaaattcgag ggcttctcgc tctccctcaa tgccaaggac gaagccgacg
     2401 ccgaccgcat gttcaaggcg ctctccgctg gtggagaagt gcgcatgccg ctgggcaaga
     2461 cgttcttcgc caagcgcttc gggatggtcg ccgaccgctt cggcgtgggc tggatggtca
     2521 tcgtcgagcc gtagcgccgc ggcagcgagg gcggtccacc agcagagacg cacgagccgc
     2581 cggagtcccg cgggagcgcg tggctctggc gacgcttgcg cgcgctgatg ctgttaacac
     2641 cgggtatcgc tgaacggaaa attggggatg ccggcaatgc ggcgcgcgtc tgcctctcgc
     2701 attgcgctcg cgccggtcgc cctcaacacc caggaaggag cattcggatg agctatgtcg
     2761 atggatttgt cgtgcctgtg cgcaagcgcg atcttgccgc ctaccggcgc atggcgaaga
     2821 cggcgggcaa ggtctggcgc gagcacggcg cgctcgagtt ccgcgaaagc atcgccgacg
     2881 acgtcagttg gggaaagcga acctcgtttc cgcgcagcgt gaagcaaaag agcggggaga
     2941 ccgtggtctt ctcctatatc gtctacaaat cacgcgccga ccgcgaccgc atcaacgcga
     3001 aggtgatgaa ggacaagcgg cttgccaaga tgatggagct caaggcattg cccttcgacg
     3061 ccaagcgcat gatctggggc ggcttcaaga ccgtggtcgc gctctagggc ggacggcgcg
     3121 cggtgcgggc gccg
//
LOCUS       DATCWM010000146         2036 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_92989, whole genome shotgun sequence.
ACCESSION   DATCWM010000146 DATCWM010000000
VERSION     DATCWM010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2036
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92989"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(44..859)
                     /gene="istB"
                     /locus_tag="VIQ50_02760"
     CDS             complement(44..859)
                     /gene="istB"
                     /locus_tag="VIQ50_02760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HEY9359327.1"
                     /translation="MTKNSTAIDTARVELLLTELRLPAIKQMWPKLAEQADKEGWPAA
                     RFLAALAELEIADRGRRRIERHLAEGRLPVGKTLEAFDFAAVPMISKAQVMALVSGDG
                     WIQQGANLLLFGPPGAGKSHLAAAIGLGLIENGWRVLFMRTTDLVQRLQVARRELALE
                     SAIAKLDKYHLLILDDIAYVSKDQAETSVLFELIGSRYERRSMLITANQPFGEWGKVF
                     PDQAMTLAAVDRLVHHATILEMNVPSYRCNAALERKRGKGRPPEGATIKTKSE"
     gene            complement(856..>2036)
                     /locus_tag="VIQ50_02765"
     CDS             complement(856..>2036)
                     /locus_tag="VIQ50_02765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008840514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HEY9359328.1"
                     /translation="PERDVIFPQTHTPGRLGLSDFTDMSALGVSIAGAPLNHRLYHFR
                     LACSGFEHAHVILGGESFVALAEGLQNALWALGGVPQYHRTDSLSAAFRNLSRDEEED
                     LTRRYEALVAHYGMEPTRNNPGVAHENGSIESVHGHLKRAVEDALLLRGSRDFPDLAA
                     YRGFIDEVTGRRNARNRKLIEAERATLKKLPERRSTDYEEASVVVTSSGGFALRRVFY
                     TVPSRLIGHRLRVRIYDERLECFLGGTPILGLRRGHPPQASTKRAHVVDYRHVIHALR
                     RKPMALLNLVYREQLFPRQAYARAFETLLAREGEKHACRATVELLALAHDRACEAELA
                     EAIEAALNAGELPDPAQLRDRFKPDAAAIPDVTVELTPLSAYDELAIVAHPHALEAAA
                     "
BASE COUNT          358 a          621 c          693 g          364 t
ORIGIN      
        1 cggtggcgca agcggtttct tgctttcaat ttgacgcggc gcgtcactct gacttcgttt
       61 tgattgtcgc gccttcgggc gggcggccct tgccgcgttt gcgctcaagc gcggcgttgc
      121 accggtagct cgggacgttc atctccaaga tggtggcgtg gtgcacgagg cggtcgacag
      181 ctgcgagcgt catggcctgg tccgggaaga ccttgcccca ttcgccgaac ggctggttgg
      241 cggtaatcag catggagcgg cgctcgtagc gcgagccgat caactcgaac agcacgctgg
      301 tctcggcctg gtccttgctg acataggcga tgtcgtcgag gatcagcagg tgatacttgt
      361 cgagtttcgc gatggcgctt tcgagcgcga gttcgcggcg cgccacttgc agccgctgaa
      421 cgagatcggt ggtgcgcatg aacaggaccc gccagccgtt ttcgatgagc cccaggccga
      481 tggcggcggc cagatggctt ttgccggcgc cgggcgggcc gaacagcaag agattggcac
      541 cctgctggat ccagccgtcg ccagagacga gcgccatgac ctgcgccttg ctgatcatgg
      601 gcacggcggc gaagtcgaaa gcctccagcg tcttgccaac cggcaagcgc ccttcggcaa
      661 gatggcgttc gatacgccgg cgaccgcgat cggctatctc cagctctgcg agcgcggcga
      721 ggaagcgggc cgcgggccag ccttccttgt ccgcttgttc cgcgagcttg ggccacatct
      781 gcttgatggc gggcaggcgc agttcggtaa ggagaagttc gacacgtgca gtgtcgatgg
      841 cggtggagtt cttcgtcatg ccgccgcctc caaagcgtgg gggtgggcga caatggccag
      901 ctcgtcatag gccgagagcg gcgttagttc gacggtaacg tccgggatgg ccgccgcatc
      961 gggcttgaag cggtcccgca actgggcagg atcgggcagt tctccagcat tcagagcggc
     1021 ctcgatggct tccgccagct ctgcctcgca agccctgtca tgcgcgagcg ccaagagttc
     1081 cacggtggcg cggcaggcgt gcttttcgcc ctcccgcgcc agcagcgtct caaaggcgcg
     1141 ggcgtaagcc tggcgtggga agagctgctc gcgatagacg agattgagaa gcgccattgg
     1201 ctttctgcgc aaagcatgaa tgacgtggcg gtagtcgacg acatgcgcgc gcttggtgct
     1261 cgcctgcggc gggtggcccc ggcgtaggcc caggatgggt gtgccgccaa gaaagcattc
     1321 caggcgctca tcgtaaatcc tgacgcgcag gcgatgcccg atgaggcgcg acggaaccgt
     1381 atagaagacg cggcgcaacg cgaagccgcc gctcgatgtg accaccacgg acgcctcctc
     1441 gtaatcggtg ctccgccgct ccggcagctt tttcagggtg gcccgttccg cctcgataag
     1501 cttgcgattg cgcgcattgc ggcggccggt aacctcgtcg atgaagccac ggtaggccgc
     1561 cagatcgggg aagtcgcggg agccgcgcaa aagcagcgca tcctcgacgg ccctcttcaa
     1621 atgcccatgg acgctttcga tggagccgtt ctcatgggcg acgcccggat tgttgcgggt
     1681 tggctccatg ccgtaatgag caaccagcgc ctcataacgg cgcgtcaggt cctcctcttc
     1741 gtcgcgggaa agattgcgaa aggccgcgga gagactatcg gtgcgatggt attgaggcac
     1801 gccgcccagc gcccaaagcg cgttctgcag cccctcggca agcgccacaa agctctcgcc
     1861 gccaaggatg acatgagcat gctcgaagcc agagcaggcc aggcggaaat gatagagccg
     1921 gtgattgagc ggtgcgcccg cgatggagac gccaagggcg gacatatcgg tgaaatccga
     1981 aagcccaagc cggcccggcg tatgcgtctg cgggaagatc acatcccgtt ctgggc
//
LOCUS       DATCWM010000147         3253 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_190107, whole genome shotgun sequence.
ACCESSION   DATCWM010000147 DATCWM010000000
VERSION     DATCWM010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3253
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190107"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..993)
                     /locus_tag="VIQ50_02770"
     CDS             complement(<1..993)
                     /locus_tag="VIQ50_02770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase family 2"
                     /protein_id="HEY9359329.1"
                     /translation="MRTVAAVVALVICVHAGLWTLLQRQQAVANIDAPLASISYSPYT
                     RSQHPDYGDRPTAEQIRADLKILSPYTQAIRTYSSTGGGELVPAIAAEFGLKVTLGIW
                     IDKNEDRNEREIQAAIALARRYSNINAIVVGNETTLRAEKSIDELVRLIQRVKRQSPV
                     PVTTGEIWTVWIEHPELASAVDFIAAHILPYWDGFTTTQAVDKTIEFYDKLRRVHPGK
                     RIVIAEFGWPSAGYNMRDADPGRIEQASVLREFVSRAEAYGIDYNIIEAFDQPWKTAE
                     GGVGMYWGLFDASRNAKFAWTGPVSDPDHAKIGAIAVLLGLLLSLPILARGAATF"
     gene            complement(1225..1692)
                     /locus_tag="VIQ50_02775"
     CDS             complement(1225..1692)
                     /locus_tag="VIQ50_02775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-1-3, beta-1-6-glucan biosynthesis protein"
                     /protein_id="HEY9359330.1"
                     /translation="MQRSRTRFLTAALGAATLFVGDPTFAQNAEQKAGDKDKPQASDA
                     KEAQKKIDEFAEAERLLGGPAANPECLWLGRRVVSLLWRDDLDTAFRHLDLYDRFGCP
                     AGHIQATFRCLVRQGNFDPKATDTLNSRVHGCWINPNAETQGTAAVPSGTTNR"
     gene            1946..>3253
                     /locus_tag="VIQ50_02780"
     CDS             1946..>3253
                     /locus_tag="VIQ50_02780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-(1-6) glucans synthase"
                     /protein_id="HEY9359331.1"
                     /translation="MGIAGALFAMAAAAIVAAWAWLGAPVQMPPSPLASGEKLYCVSY
                     TPFRGTQSPLGPEVPVDPRQIDEDLAQLKHVTDCVRTYSVDYGLDQIAEIAKRHGIKV
                     LQGLWLSNLPERSRRQIATAIALAKRFPDVIAAVIVGNEVLLRGEMAAPDLVRTIREV
                     KSQVGMPVTYADVWEFWLRHRDVASAVDFITIHILPYWEDFPIPAREAAAHVDAIRGQ
                     MAAAFPGKDIFVGEFGWPSAGRMREGALPSPVSQARTVHEVLDHAKRENYRVNLIEAY
                     DQPWKRQLEGTVGGHWGLFGAYRREAKFTWGGVVSNHPHWHWQAAGGVALAAVTFATA
                     LAVRRRRAAAGGVGGSLRIAAIATVPGILIGWTLANVPLESLTVGDWLRSLAWAAAAL
                     LSPVVGAAAVMSGTTAPTFAHILGRAGQRPRDPVALALGVLRVA"
BASE COUNT          582 a         1008 c         1059 g          604 t
ORIGIN      
        1 gaaggtggcg gcgccacgcg ccaggatcgg cagcgacagc agcagaccga gcagcaccgc
       61 gatcgcgccg atcttggcat gatcaggatc gctcaccggt ccagtccagg cgaacttggc
      121 gttgcgcgag gcgtcgaata agccccaata catgccgacg ccgccttcgg cggtcttcca
      181 gggctggtcg aaggcttcga tgatattgta gtcgatgccg tacgcctcgg cacgggaaac
      241 gaattcgcgc agaacgctcg cctgctcgat ccgtccggga tcggcgtcgc gcatgttgta
      301 cccggcgctc ggccagccga actcggcgat cacgatgcgc ttgcccggat gcacgcgccg
      361 cagcttgtcg tagaactcga tagttttgtc gacggcctgc gtcgtggtga atccgtccca
      421 gtagggaagg atatgcgccg cgatgaagtc gactgcggac gcaagctccg gatgctcgat
      481 ccacaccgtc cagatctcgc cggtggtgac cggtacagga ctttggcgtt tcacgcgctg
      541 gatcaaccga actagttcgt cgatcgactt ctccgcgcgc agcgtggttt cgttgccgac
      601 cacgatagcg ttgatgttgc tgtagcgacg cgcaagggcg atcgccgctt gtatctcccg
      661 ctcgttgcgg tcttcgttct tgtcgatcca gatgccgagc gtaaccttga gcccgaactc
      721 ggcggcgatt gccggcacca gctcaccgcc gccggtagaa ctgtaagtgc ggatcgcctg
      781 agtataggga ctgaggatct tcaggtcggc gcgaatctgc tccgccgtcg gacggtcgcc
      841 gtaatccgga tgttgcgagc gcgtgtacgg cgagtaggaa atgctggcga gcggggcgtc
      901 aatattggca accgcctgtt gccgttggag caaagtccat aaaccggcat gtacgcagat
      961 gacaagcgcc accacagcag cgacggtgcg catagaaagc caaccacgcg gggcaaaatg
     1021 ctcagacccg aacctgtccc cctaggtcca accaaggcag cttaacgtac cttagcatga
     1081 ggcgtcgtga caagtagcca tcggtcatgg ccgatgcaag gcaaacaaca acacgacaaa
     1141 aaaatcgttc cagaaaattt taagaagaat tcattctgaa cgtttgtaca gcttcgcgcc
     1201 gtcgccgctg aatgtttgta cagactagcg gttggtcgtg ccgctgggca cggccgcggt
     1261 gccttgcgtc tcggcgttcg gattgatcca gcagccgtgc acccggctgt tgagcgtatc
     1321 ggtcgcctta ggatcgaaat ttccttggcg cacgaggcag cggaaggtcg cctggatgtg
     1381 gcctgccgga cagccgaacc ggtcgtaaag atcgaggtgg cgaaaagcgg tatcgagatc
     1441 atcgcgccag agcaggctga ccacccgacg ccccagccac agacattccg gattggcggc
     1501 cggtccgccc aaaagtcgct cggcttcggc gaattcgtcg atcttcttct gggcttcctt
     1561 ggcgtcgcta gcctgcggct tatccttgtc cccggccttt tgctccgcat tctgggcgaa
     1621 tgtcggatct ccgacaaaaa gcgtcgccgc gccaagtgcg gcggtaagaa aacgcgtcct
     1681 tgagcgctgc atgattgtcc tggcgtgttg agccgtaccg gtcggcaggt cgcctctccc
     1741 atggcggccc attcggtcag cattgcggcg gcggccgcaa gcctcggcgc cacctgatta
     1801 aagcagccgg aagaggtaac gccaagatgg caaaggcctt tgcggcaaaa aatcgccggc
     1861 aacgcgattt ggcggcgctt ggcaccgccg ttgccgcacg ataagcgagg cctcatcctc
     1921 gctcagggga ccgggaccaa tctcgatggg cattgcgggc gcgcttttcg cgatggcggc
     1981 ggcggcgatc gtcgcggcat gggcctggct cggcgcgccg gttcagatgc cgccgtcccc
     2041 gttggcctcg ggcgagaagc tttattgcgt ctcgtacacg ccgtttcggg ggacgcagag
     2101 ccccctcggg ccggaggttc cggtcgaccc caggcaaatc gacgaggatt tggcccagct
     2161 caagcacgtc acggactgcg tgcgcaccta ctccgtcgat tacggactgg accagatcgc
     2221 cgaaatcgcc aagcgccacg gcatcaaggt gctgcaaggg ctgtggctgt ccaacttgcc
     2281 cgagcgcagc cgcaggcaga tcgcgaccgc aatcgcgcta gccaagcggt ttcccgatgt
     2341 gatcgcggcg gtcattgtcg gcaatgaagt tttgctgcga ggcgaaatgg cggcgcccga
     2401 cctcgtgcgg accatccgcg aggtcaagtc gcaggtcggc atgccggtaa cctacgccga
     2461 tgtgtgggag ttctggctgc ggcaccgcga tgtagccagc gcggtcgatt tcatcaccat
     2521 ccacatcctg ccctattggg aggactttcc cattcccgca cgggaggcgg cggcgcacgt
     2581 cgacgccatc cgcggacaga tggccgctgc ctttcctggg aaggacatat tcgtggggga
     2641 attcggctgg ccgagcgccg gccgcatgcg cgaaggcgct ctgccctcgc cggtgagcca
     2701 agcgcgcacc gtgcatgagg tgctcgatca cgccaagcgc gagaattacc gggtcaacct
     2761 gatcgaggcg tacgaccagc cctggaagcg ccaactcgaa ggcaccgtcg gcgggcattg
     2821 gggcctgttc ggcgcgtatc gacgggaggc caagttcacc tggggtgggg tcgtctccaa
     2881 tcatccccat tggcattggc aggccgcggg gggcgtggcg cttgcagcag tgactttcgc
     2941 cacggcactc gccgttcgca gacgcagggc agccgcgggt ggtgtcggcg ggtcgctgcg
     3001 catcgcggcg attgcgacgg tgccaggtat cctgatcggc tggacgctgg ccaacgtgcc
     3061 gctcgaaagc ttgaccgtcg gtgattggct gcgctcgctc gcctgggccg cggcggcgtt
     3121 gctatcgccg gtggtcggcg cagctgccgt gatgtcgggt acgacagcgc cgaccttcgc
     3181 acacattctc ggccgtgcag ggcaacgtcc gcgcgatccc gtggcgctgg cgctcggcgt
     3241 tctgcgcgtc gca
//
LOCUS       DATCWM010000148         3333 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_411641, whole genome shotgun sequence.
ACCESSION   DATCWM010000148 DATCWM010000000
VERSION     DATCWM010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3333
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_411641"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(124..615)
                     /locus_tag="VIQ50_02785"
     CDS             complement(124..615)
                     /locus_tag="VIQ50_02785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY9359332.1"
                     /translation="MKSKSFEGMVCSIAGVLEAVGDRWAVLILRDLSLGLSRYEDLRR
                     STDVTNATLSDRLRHLEDNGLIERRQYQSNPERYEYVLTPKGRDVILVIQALAQVGDK
                     WAVAGDAGPPLKFVDRKTGHSVKLAMVDSETGQRVRAHDLLPQEGPGADDLVRWRLTH
                     FRK"
     gene            889..1386
                     /locus_tag="VIQ50_02790"
     CDS             889..1386
                     /locus_tag="VIQ50_02790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEY9359333.1"
                     /translation="MSEPAERQYVVTLEVNGARRTASVEARKLLVHFLRDDLGLTGTH
                     VGCVTSQCGACTVDIDGQAVKSCTVLAVMADGSSITTIEGLAPGDGTLHPIQAAFHEH
                     HALQCGFCTPGMIMAVRQLLARNPHPMESEIRHNLAGNICRCTGYTNIVRAIESLSLE
                     AHHHD"
     gene            1379..>3333
                     /locus_tag="VIQ50_02795"
     CDS             1379..>3333
                     /locus_tag="VIQ50_02795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEY9359334.1"
                     /translation="MTEAVALKYVGQPLRRREDFKFVTGQGRYTDDIKAPGMLHMAVL
                     RSPHAHAVIKEVDLAAARAAPGVRLVLSGADLVGKIGGIVPNWIIPGTKVPDRPVVAV
                     DRVRFIGECVALVVAETQARAHDAVGLIEVDYEVLPAVIDEEAAIRDGAPQLHDNVPN
                     NITTVYKIGGGDYGKAAKEADQVITLRLANNRLIPTCMETRSILAQGDVDGTLTLYLQ
                     SQVPHMHRRWIADAVGIPEHRLRIVAPDIGGGFGAKMHLYPEDLLCPYLARTLGVPVK
                     WWESRSESHQSTNHGRAHTETIEIAFRNDGRILGLKVETLGNVGAYLSNMASGGPTVN
                     TVNFGTGAYKIEHYAARSRVVVTNTVPVDAYRGYGRPEGGYIAERAIDAVARHLSLDQ
                     VEVRRRNFIQRADFPYKPYNGPAVIYDSGNYEGLLAKAMEAFDYDGRRSERDQLRTQG
                     RYRGIGVAAYTHMCGMAPSRRLALMGFNRGGWESARVSVDSGGRVTIFSGSMSQGHGH
                     VTSLAQIAADVLQVPIEDIDVVQGDTKQVQAGHGTFNSRSMAVGGSGVHVSSVRVIAK
                     AKKIAAGMLEVDEGDVSYQAGKFTVPGTDIAPLTFGSVARMAYVGHKLPDGMEPGLDE
                     TVFYDPKGMGSPSGIHMAYVEVDPETG"
BASE COUNT          620 a         1094 c         1026 g          593 t
ORIGIN      
        1 tcatcaacag cggggggcgc atccgactat gacggagttt tgcgcgctct ctcgcgctga
       61 gtgagcgcgc cggtgttcgg cgcgacgcga gttcccgagg ctcaaagccg ggttcgcggc
      121 gcgctatttc cggaaatgcg tcaaacgcca gcggacgagg tcgtcggcgc ccgggccttc
      181 ctgcggcaac aggtcatggg ccctgacgcg ttgcccggtc tcgctgtcga ccatcgcaag
      241 cttcaccgaa tgaccggtct ttcgatccac gaatttaagc ggtggaccgg cgtcgccggc
      301 aaccgcccac ttgtccccca cctgcgccag cgcctggatc acgaggatga cgtcacggcc
      361 cttgggggtc agaacgtatt cgtagcgctc gggattgctc tggtactggc gccgctcgat
      421 cagcccgttg tcctcgagat gccgcagccg atcggacaag gtcgcgttgg tcacatccgt
      481 cgaccggcgc aggtcctcgt atcggctcag cccgagcgac aggtcgcgca ggatcagtac
      541 ggcccagcgg tcgccgaccg cctccagcac gccggcgatc gagcacacca tgccctcaaa
      601 actcttcgac ttcataaaat gcttgcctcc tggcctagtt cctcttatca ttagagttac
      661 tatctgtcga tccctatccc cgctgttgcc gggaggcccc ggggatcgcg gtcagggatt
      721 tcgatggaac gggacgatca gacatgaccg agcttcgcga ccttgtgcac cgcgattccc
      781 aatcctgtct tcgtggcgat cgagatcgcc gacatccgct tctcgtgatc gatccctcac
      841 ccgcatcctc aggagatgca gtttcatgac acgccgtcgg aggaaggaat gagcgaaccc
      901 gctgaaaggc aatatgtcgt caccctcgag gtcaatggcg cgcgccggac cgcttcggtc
      961 gaagcgcgca agctgctggt tcattttctc cgcgacgatc ttggtctgac cggaacccac
     1021 gtcgggtgcg tcacgtcgca atgcggcgcc tgcaccgtcg atatcgatgg acaggcggtc
     1081 aaatcctgca cggtgctcgc cgtcatggct gacgggtcgt cgatcacgac catcgaagga
     1141 ctcgcacccg gtgacggaac cttgcatccg atccaggctg ccttccacga acaccacgcc
     1201 ctgcagtgtg ggttctgtac gcccgggatg atcatggcgg tccgtcaatt gctcgcacgc
     1261 aaccctcacc cgatggaaag cgaaatccgt cacaacctcg ccggcaatat ctgccgctgc
     1321 accggctaca ccaacatcgt gcgtgccatc gaatccctca gcctggaggc gcatcaccat
     1381 gactgaagca gtcgcactca aatatgtcgg gcagccgttg cgccggcgcg aagacttcaa
     1441 gttcgtcacc ggccagggac gctataccga cgacatcaag gcgccgggca tgctgcatat
     1501 ggctgtgctg cgatcgccgc atgcccatgc cgtcatcaaa gaggtcgatc tcgccgcggc
     1561 gcgcgcggcg cctggcgtcc gcctggttct gtcaggcgcc gacctcgtag gcaagatcgg
     1621 ggggatcgtt ccgaactgga tcataccggg gaccaaggtg ccggacaggc ccgtggtggc
     1681 cgtcgaccgg gtccgtttca tcggcgaatg cgtcgcactg gtggtcgccg aaacccaagc
     1741 cagggcccac gatgctgtcg ggctgatcga ggtcgattac gaagtacttc ccgccgtcat
     1801 cgacgaggaa gccgcgatcc gcgatggcgc gccgcaattg cacgacaacg tgcccaacaa
     1861 catcaccaca gtctacaaga tcggcggcgg cgactacggc aaggccgcaa aggaggccga
     1921 tcaggtcatc acgctccgcc tcgccaacaa tcgcctgatc ccgacctgca tggagacgcg
     1981 ctcgatcctg gctcaaggcg atgtcgatgg caccctcacg ctttacctgc agagccaggt
     2041 cccgcacatg catcgccgct ggattgcgga cgcggtcgga attcccgagc atcgcttgcg
     2101 gatcgtcgcg cccgacatcg gcggcgggtt cggcgcgaag atgcatctct atccggagga
     2161 cctgctctgc ccgtatctgg cgcgcacgct tggcgtaccc gtcaagtggt gggaatcgcg
     2221 ttccgaaagc catcaatcga ccaaccatgg ccgggcgcac accgagacga ttgaaatcgc
     2281 cttccgcaat gacgggcgga ttctcggcct gaaggtcgag acgctgggca atgtcggcgc
     2341 ctatctgtcg aacatggcaa gcggcggccc gacggtgaac acggtcaatt tcggcaccgg
     2401 ggcctacaaa atcgagcact acgcggcgcg ctccagggtg gtcgtgacca ataccgtgcc
     2461 ggtcgacgcc tatcgcggct atggccggcc cgaaggcgga tacatcgccg agcgggcgat
     2521 cgacgcagtc gcgcgtcacc tcagccttga ccaggtcgag gtgcggcgca ggaatttcat
     2581 ccagcgcgcc gactttccct acaagcccta caacgggccc gcggtgatct acgacagcgg
     2641 caattatgaa ggcctcctgg caaaagcgat ggaagccttc gactacgacg gccgccgcag
     2701 cgaacgcgat cagttgcgga cccaaggccg atatcgcggc atcggcgtcg ccgcctatac
     2761 ccatatgtgc ggcatggcgc cgtcgcgccg cctcgcgctg atgggcttca atcgcggcgg
     2821 ctgggaaagc gcccgtgtca gcgtcgattc gggcgggcgt gtcacgatct tctcgggatc
     2881 gatgagccag ggccacggcc atgtcacgtc actggcgcag atcgccgccg acgtgctgca
     2941 ggtgccgatc gaggacatcg acgtggtgca gggcgacaca aaacaggtcc aggccggtca
     3001 cggcaccttc aactcgcgtt cgatggcggt cggcggctcc ggcgttcatg tctcctcggt
     3061 tcgcgtcatt gcgaaggcga agaagattgc tgccggcatg ctcgaggtcg acgaaggcga
     3121 tgtgtcctac caggccggca agttcactgt ccccggcacc gacatcgccc ctctgacatt
     3181 cggctcggtg gcacgcatgg cctatgtcgg ccacaagctt ccggacggca tggagccggg
     3241 cctcgacgaa accgtgttct acgatccgaa gggcatgggc tcgccgtcgg gcatccacat
     3301 ggcctatgtc gaggtcgacc cggagacggg gat
//
LOCUS       DATCWM010000149         2086 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_535727, whole genome shotgun sequence.
ACCESSION   DATCWM010000149 DATCWM010000000
VERSION     DATCWM010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2086
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_535727"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            190..1200
                     /locus_tag="VIQ50_02800"
     CDS             190..1200
                     /locus_tag="VIQ50_02800"
                     /inference="COORDINATES: protein motif:HMM:NF012493.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HEY9359335.1"
                     /translation="MIEAPQIAELIKLGHLVPTKVYAPVDRDIAKGVRTQTGDYVVSA
                     LSARMNTDQLVGDVVADWLKHGERRRTVAFAVDVAHSVHVRNAFLEFDVRAEHLDGST
                     PKSERDAILARLGSGETEIVTNCAVLTEGWDMPAVGCLILARPTKQLGLFRQMVGRVL
                     RPAEGKTDAIILDHSGAVYRHGLPEDHVEWTLDVDRRAENPTQARRERGEEPKLRECP
                     SCKTVMAAPPCHACGWMPAPRHGRDRDFADGELGLVIGGKARAPVYDENRRGDFFQQL
                     RAVQQMRGYKKGWAAHKFKDKFGTFPPWSYNDLPPIAPTDAVLRWIKSRNIAFAKARS
                     AA"
     gene            1197..1388
                     /locus_tag="VIQ50_02805"
     CDS             1197..1388
                     /locus_tag="VIQ50_02805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359336.1"
                     /translation="MTRSAYLLAELRCASLRARLRQADIDAVGMALKAGLVEPEQALE
                     LLADCNCLQFISPKEISNE"
     gene            1381..>2086
                     /locus_tag="VIQ50_02810"
     CDS             1381..>2086
                     /locus_tag="VIQ50_02810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359337.1"
                     /translation="MSDDLTLHPLVRQMIREDTRDKPLTMNWAPLERDAYNRLGLRDL
                     SPLAMKARTQIITEVLAAGERFISYSRRRAFYTESQRYYRPTYSYRGIIPAVDQLAAE
                     GIIEHEKVPPGHRGFQSRFRAAPDLLKELSAVRVQYKPLELIVLRDDDGNPVDYCDNR
                     ETRAMRKRLTELNEALLSQQIGVGDRIIREGNRLDNGGRAQTQLHRVFHRGDFNLGGR
                     FYGGHWQNIPAEDGRDR"
BASE COUNT          417 a          644 c          651 g          374 t
ORIGIN      
        1 gcgcgcgcga ttcgctcaaa ccgaatgccg atgccggcgg cgacgatcgt catcattgat
       61 gaagcgcacc atgcgcgcgc gcgtacctat ggggcggtcc tcgaccacta tccggacgcg
      121 gcgatcatcg gactaaccgc cacgccggta cgcggtgacg gtcgcgggct cggcaatatt
      181 ttcgagacga tgatcgaggc gccgcagatc gcggagctga taaagctcgg gcatctggtc
      241 ccgaccaagg tctatgcgcc ggttgatcgc gacatcgcca agggcgtgcg aacgcagacc
      301 ggcgattatg tcgtctcggc tctgtcggcg cggatgaata ctgaccagct cgtcggagat
      361 gtggttgccg attggctgaa gcacggggag cgccggcgga cggtcgcctt cgccgtcgat
      421 gtcgcgcact cggtccacgt ccggaacgcc ttcctggagt tcgacgttcg cgccgaacat
      481 ctcgacggct cgacgccgaa gagcgagcgc gatgcgatcc tggcacggct gggatcaggg
      541 gaaaccgaaa tcgtcaccaa ctgcgcggtg ttgaccgagg gctgggatat gccggccgtt
      601 ggctgtctga ttcttgctcg tccgaccaag cagcttggac tgttccggca gatggttggg
      661 cgagttctgc gccccgcgga aggcaagacg gacgccatca ttctcgacca cagcggcgcc
      721 gtctatcggc atggcctgcc cgaggatcac gttgaatgga cgctcgacgt tgaccggcgt
      781 gccgagaacc caacgcaggc taggcgcgag cgtggagagg aacccaagct ccgcgaatgt
      841 ccgtcgtgca agacagtgat ggctgcgccg ccctgccatg cctgtggatg gatgccagca
      901 ccacgacacg gacgagatcg tgatttcgcc gatggcgaat tgggactggt gatcggcggc
      961 aaggcgcggg cgccagtcta tgacgaaaac cgtcgcggtg atttcttcca gcagctccgt
     1021 gccgtgcagc aaatgcgcgg atacaaaaag ggttgggctg cgcacaagtt caaggacaag
     1081 ttcggcacat tcccgccgtg gtcctataac gacctgccgc ccatagcacc gaccgacgcc
     1141 gtcctgcgct ggatcaagtc acgcaacatc gccttcgcta aagcgaggag cgcggcatga
     1201 cgcggagcgc gtatctcctc gccgaactcc gctgtgcgtc gctgcgagcg cggctgcggc
     1261 aagccgacat tgatgctgtg ggaatggcgc tcaaggccgg gctggtcgag cccgaacagg
     1321 cgcttgaatt attagccgac tgcaattgcc tgcaattcat ttcaccaaag gaaatttcaa
     1381 atgagtgatg atctgacgct tcatcctctt gtccgccaaa tgatccgcga agacactcgc
     1441 gacaaaccgt tgacgatgaa ttgggcgccg ctcgaacgcg acgcctataa ccgtctcggg
     1501 ttgcgcgacc taagcccgct ggccatgaag gccagaacgc agattatcac cgaggtgttg
     1561 gccgctggcg agcgctttat ttcctactcg cgtcgccgcg ccttctatac cgaaagccag
     1621 cgctactacc gcccgaccta cagctatcga ggcatcatcc cggcggtcga tcagcttgca
     1681 gccgaaggga ttatcgagca tgagaaagtc ccgcccggtc atcgcggctt tcaatcgcgc
     1741 ttccgcgccg cacccgatct gctcaaggag ctgtccgcgg tccgggtgca atacaaaccg
     1801 ctcgaattga tcgtactgcg agacgacgac ggcaatccgg ttgactactg cgacaaccgc
     1861 gagacccgcg ccatgcgcaa gcgccttacc gagttgaatg aggcgctgct atcccaacag
     1921 attggcgtcg gggatcggat catccgcgag ggcaaccgac tcgacaatgg cggtcgagcg
     1981 cagacacagc tccatcgtgt gttccatcgc ggcgacttca atctgggcgg ccggttctac
     2041 ggcgggcact ggcagaacat ccccgctgag gacggccgcg atcgga
//
LOCUS       DATCWM010000150         2347 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_325234, whole genome shotgun sequence.
ACCESSION   DATCWM010000150 DATCWM010000000
VERSION     DATCWM010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2347)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2347)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2347
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_325234"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..138)
                     /locus_tag="VIQ50_02815"
     CDS             complement(<1..138)
                     /locus_tag="VIQ50_02815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HEY9359338.1"
                     /translation="MQDLIARAEKVARLLKHRRENVAVAESSTGGLIAAALLALPGAS
                     AY"
     gene            180..320
                     /locus_tag="VIQ50_02820"
     CDS             180..320
                     /locus_tag="VIQ50_02820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359339.1"
                     /translation="MLAPSQRAYDAIKRDQRERRVQVGRLKLHKTLVETIDLKLSHRP
                     LW"
     gene            345..1250
                     /locus_tag="VIQ50_02825"
     CDS             345..1250
                     /locus_tag="VIQ50_02825"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEY9359340.1"
                     /translation="MAKKPAANRRSTSERHYNDILYEVRDQVAWATINRPRVLNAFRE
                     QTLDELIDALKSTREDPSIACAVVTGAGDKAFSAGGDFYAMKRLNWVNGAMWNDRMQG
                     LAMTIRGLPIPVIAMVNGWCMGGGHELALWCDLVIASENAVLGQTGARVGACPTVGAT
                     QYLPRIIGERLAREMIFCARRFTAQEAVAIGLINKCVPQSELREETLAWCETIKGHSP
                     QTLRMTKKSLNFESDLLYASWQHGMELLAHVWGSEESLEGMDAFLEGRKPDFQKFRMR
                     NKRELEDYLDGCAKDLNAPPSMRRK"
     gene            1254..>2347
                     /locus_tag="VIQ50_02830"
     CDS             1254..>2347
                     /locus_tag="VIQ50_02830"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEY9359341.1"
                     /translation="MSENGPLAGIRVLDLTRILAGPLCTMMLGDMGAEVIKVEPPETG
                     DDTRAWGPPFLAGDAVYFLGVNRNKRSLTLNMAVPEGQKVLAGLIEKADVLIDNFRLG
                     TLEKWGFADAWFERHAPRLVRCSITGYGSSGPKAALPGYDFILQAESGLMSICGEPDG
                     RPTKYGVAIVDVCTGMLASNSILAALHARERTGKGQKVELSLYETSLAMLVNVAASYL
                     AAGRNAGRFGNGHPSIVPYTTYQTADGMIALGVGNERQFARVAEVLGHPEWAKDAQFT
                     SNRARVENRSVIDGLINAALSHDKADAWLAKLKAAGIPCGKINSVAEALDDAQTAARR
                     MIETIEHPATGALKMLGIPFKFSATACSVRR"
BASE COUNT          461 a          760 c          729 g          397 t
ORIGIN      
        1 atacgcggat gcgccgggca atgccagcag cgccgccgca atcaggccgc cggtcgagga
       61 ctccgccacg gcaacgttct cgcggcggtg cttcagaaga cgagcgacct tctcggcgcg
      121 tgcgatcaag tcctgcattg atgctcatct ccttccatcg accggtccga tgcgccaact
      181 tgctcgcacc atcgcagcgc gcctatgatg ccatcaagcg cgatcagcga gagcgtcgag
      241 tgcaagttgg acggctcaag cttcataaga cgctcgtcga gaccatcgac ctcaaactca
      301 gccatcggcc gctctggtga aagcacggga cgggtgaaaa agatatggcc aagaagccag
      361 cagcgaacag gcgcagcacg agcgagcgac actacaacga catcctctat gaagtccggg
      421 accaagtcgc gtgggcgacc atcaaccgcc cgcgcgtgct caatgcgttt cgcgagcaga
      481 ccctcgacga gctcatcgat gcattgaaat ccactcgcga ggatccatcc atcgcctgtg
      541 cggtggtgac cggcgccggc gacaaggcgt tttccgccgg cggcgacttc tacgccatga
      601 agcggctcaa ctgggttaat ggcgccatgt ggaacgaccg catgcagggt ctcgccatga
      661 ccatccgcgg tctccccatc ccggtcattg ccatggtcaa cggttggtgc atgggcggcg
      721 gccacgagct cgccttgtgg tgcgatctgg tcattgcatc ggagaatgcc gtgctcggcc
      781 aaaccggcgc ccgcgtcggc gcctgcccga ccgtgggcgc gacgcaatac ctgccgcgca
      841 tcatcggcga gcgattggcg cgcgagatga tcttctgcgc gcggcgtttc accgcgcaag
      901 aggccgtcgc gatcgggctc atcaacaaat gcgtgccgca aagtgagctg cgcgaggaga
      961 cgctggcgtg gtgcgagacg atcaaaggcc atagtccgca gacgctgcgc atgaccaaga
     1021 agagcctcaa cttcgaatcc gatctcctct acgcctcctg gcagcacggc atggaattgc
     1081 tcgcccatgt ttggggctcg gaggagagcc tcgagggcat ggacgccttt ctcgagggac
     1141 gcaaaccgga ttttcagaaa ttccgcatgc gcaacaaacg cgagcttgaa gattatctcg
     1201 acggctgcgc caaggatctc aacgcgccgc cctccatgcg caggaagtaa tccatgagtg
     1261 agaatggccc gctcgccggg atccgcgtgc tcgatctcac ccgcatcctg gcagggccgt
     1321 tgtgcacgat gatgctcggc gatatgggcg ccgaggtcat caaggtcgag ccgcccgaga
     1381 ccggcgacga tacccgcgcc tggggaccgc cgtttctcgc cggcgacgcc gtctatttcc
     1441 tcggcgtcaa ccgcaacaag cgttcgctca cgctcaacat ggcggtgccg gaggggcaga
     1501 aggttctcgc tggcctgatc gagaaggccg acgtgctcat cgacaacttc cgcttgggca
     1561 cgctcgagaa gtggggtttt gcagacgctt ggttcgagcg gcacgcacca cggctggtgc
     1621 gttgctccat cacaggatac ggatcgagcg gccccaaggc ggcgcttccc ggctatgact
     1681 tcatcctgca ggcggaatcc gggctcatga gtatttgcgg cgagcccgac ggcaggccga
     1741 cgaaatacgg cgtcgcgatc gtcgacgtgt gcaccggcat gctcgcatcg aactcgatcc
     1801 tcgcggcgct ccatgcgcgc gaacgcaccg gcaagggcca gaaggtcgag ctctcgcttt
     1861 acgaaacgtc gctggcgatg ctcgtcaacg tggcagcgag ctatctcgcc gccggccgca
     1921 atgccgggcg cttcggcaac ggccatccca gcatcgtgcc gtatacgacc tatcagaccg
     1981 ccgacggcat gatcgcgctc ggggtaggaa acgagcgcca gttcgcgcgc gtcgcggagg
     2041 tgctcggtca ccccgaatgg gccaaggacg cgcaatttac cagcaaccgt gcgcgagtcg
     2101 aaaaccgctc ggtgatcgac ggcctgatca acgcggcgtt gtcccacgat aaggccgacg
     2161 cttggctcgc caagctcaaa gcggcgggaa ttccttgcgg caagatcaat tcagtcgcag
     2221 aagcgcttga cgatgcgcag acggccgcgc gccggatgat cgagaccatc gagcatcccg
     2281 ccaccggcgc cttgaagatg ctcgggattc cattcaagtt ctccgccacc gcctgctccg
     2341 tgcggcg
//
LOCUS       DATCWM010000151         5122 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_389921, whole genome shotgun sequence.
ACCESSION   DATCWM010000151 DATCWM010000000
VERSION     DATCWM010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5122
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_389921"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            99..3314
                     /locus_tag="VIQ50_02835"
     CDS             99..3314
                     /locus_tag="VIQ50_02835"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY9359342.1"
                     /translation="MSRFIDYAIGHARLTIATLIFLLSAGFLAYVTIPKEAEPDVRIP
                     IIYVQLSQRGISPEDSERLLLRPVETQLKSVGNVKEMRSTAFEGGGFVLLEFEAGFDS
                     KAALADVRAKVDQAKHDLPRDVDEPQVLEVNLSLYPVLVVGLSGDVPERTLLRIARAA
                     KNAIEQAPGVLSAELRGSRDEAVEIILNPMLLASYGLSLDQLGSITQSFNTLIAAGAL
                     EGETGRFAVKVPSLFEKPQDILNIPIVASPMASVRLLDVAQVKPTFKDATSVTRVNGR
                     PAMTIEVSKRTGANLIETVDAVKATVAALQQTWPEAVHVTFTQDKSKIIRQMLGDLQN
                     SVATGVLLVAIVILFVLGFRASLFIGIAIPASFLAGVLGLQLAGLTVNIVVLFSLILA
                     VGMLVDDAIIVSEFAERRMAEGMAPKEAYSLAAKRMSGPVIAATATRIAAFSPLLFWP
                     GVVGQFMKYLPITLIATLSASLAVALFFTPTLGALFGKAARADEPGSGRVSGARTVKS
                     PRWPLASLASAAAPVPHAETAGDRGPYMRTVRLVLRYPGMTLALAAVLLFAVHVAYGK
                     FGRGVEFFPKVEPDYGQVVVHARGNLSLDEKNRLVTEVEKRVLAFDGLKTVYTRIGEQ
                     PRGMSELTEDTIGVILFEFSDWRSRAPAHEIMDEIRAKTADIAGILIEVTAPRAGPPT
                     GKPIQVQLGALDPAELPAAATKVAAMLAARSDIRDLDDGLPLPGIDWKIEVNKSEAAK
                     YGAGINTVGSAVQLVTNGLKATEYRPVDSDKSVDILVRFPPERRSLDQIDDLRVQTQA
                     GHVPIGNFVQRVPAPRVGYINRVNGSRVITVSANVAEGVQTAIIQQEIGAALAKADLG
                     SGVTFKLKGEDEERAKASAFLLKAFGTAIFLIFAILLAQFNKLTSVGLVLTAVVLSTF
                     GVMLGLMVMGQPFGVVMAGIGVIANAGVIVNNNIVLIDTYDRLRGEGVAAYDAIIETC
                     RERARPVVLTAVTAILGVLPIAFGMNIEFLSREITVGAPATQWWINLSTAIVFGLGFA
                     TMLTLIVTPAALMVIANLRERRLRIVAALRTWRRRPAWGRS"
     gene            3554..4000
                     /locus_tag="VIQ50_02840"
     CDS             3554..4000
                     /locus_tag="VIQ50_02840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY9359343.1"
                     /translation="MYRHVLIPTDGSELAARAVRHGLSLAKFVGAKVTALTVEASFDV
                     YTVPASRVYAMSGAFAEHVERAKAHAQRILDGVAEQARAAGVVCDTVQVEEDHPYEAI
                     IVTAEQRGCDLIVMASHGRSGIAAVVLGSVTTKVLTHTKIPVLVCH"
     gene            4101..>5122
                     /locus_tag="VIQ50_02845"
     CDS             4101..>5122
                     /locus_tag="VIQ50_02845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005216 - monoatomic ion channel activity
                     [Evidence IEA];
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-gated ion channel"
                     /protein_id="HEY9359344.1"
                     /translation="MTRRIWRSGVNLRRRLYEILEHGPIGDRTGLIVSRLIVLLIVTN
                     LIAMTLDSVPALEAQYGPLFLAIELLSLIAFTIEYALRVWVAAEHAPYRHSSERKARW
                     KFVTSPLGVIDLLAVLPFWFALVLPADLRVLLVFRMVRFLKLARYSPAMRSLLDALYN
                     ERRALFGCFVILLGATLVAASIMHVIERHAQPDKFGTIPDAMWWAIVTLGTIGYGDVV
                     PVTALGRIVASITIFVGLIMVALPIGIVATAFAEEIHRRDFVVTWGMVARVPLFAELE
                     ATEIADIMRLLHAQQVEGGDVITRRGELAHSMYFIADGEVEIELKQERVRLGAGHFFG
                     EIAALRR"
BASE COUNT          860 a         1664 c         1640 g          958 t
ORIGIN      
        1 gcgtcatcgt gcaaggccag gacttcgtgc gcgaagggca aaccgtggac gcagtgggag
       61 tgcccgagct caccgcggtc gcgaagtagt cgaatgtgat gtcaagattc atcgactacg
      121 ccatcggtca cgcgcggctc accatcgcca cgctgatttt cctgctaagc gccggctttt
      181 tggcctatgt gacgatcccc aaggaagccg agccggacgt cagaattccg atcatctacg
      241 tgcagctctc gcaacggggc atcagccccg aggactccga gcggctgttg ctgcggccgg
      301 tcgagaccca gctcaaatcg gttggcaacg tgaaggagat gcgctcgacc gccttcgagg
      361 gcggcggttt cgtgctgctc gagttcgagg cggggttcga ttccaaggcg gcgctggccg
      421 acgtgcgcgc caaggtggac caggccaaac acgacctgcc gcgcgacgtg gacgagccgc
      481 aggtgctgga ggtcaatctc tcgctctacc cagtgctggt ggtgggactc tccggcgacg
      541 ttcccgagcg tacgctgctg cgcatcgccc gcgctgccaa gaacgcgatc gagcaggcgc
      601 cgggggtgct ctcggcggag cttcgcggct cccgcgacga ggcggtcgag atcatcctca
      661 acccgatgct gttggcgagc tacggacttt ccctcgacca gctcggctcg atcacgcaat
      721 ccttcaacac gctcatcgcc gccggcgcgc tcgaaggcga gaccggccgc ttcgcggtca
      781 aggtgccctc gctgttcgag aagccgcagg acatcctcaa cattcccatt gtcgcctcgc
      841 cgatggcctc ggtgcggctg ctcgacgtcg cgcaggtcaa gcccaccttc aaggacgcga
      901 cctcggtcac gcgggtgaac gggcgccccg ccatgaccat cgaggtctcg aagcgcaccg
      961 gcgccaacct catcgagacg gtcgacgcgg tgaaggcgac agtggcggcg ctgcagcaga
     1021 cctggcccga agccgtacac gtcaccttca cccaggacaa atcgaagatc atccggcaga
     1081 tgctcggcga cctgcagaac tcggtcgcga ccggcgtgct gctggtggcg atcgtgattc
     1141 tgttcgtgct cggctttcgc gcttcgctat tcatcggcat tgcgataccc gcgtccttcc
     1201 tggccggcgt gctcgggctg cagctcgcgg gactgaccgt caacatcgtc gtgctgttct
     1261 cgctgatcct ggcggtcggg atgctggtcg acgatgcgat catcgtctcg gagttcgccg
     1321 aacgccgcat ggccgaaggg atggcgccga aggaggccta ttcgctcgcc gccaagcgca
     1381 tgtccgggcc ggtgatcgcg gccaccgcaa cccgcattgc cgcgttctcg ccactcctgt
     1441 tctggcccgg cgtggtcggc caattcatga aatatctgcc gatcacgctg atcgcgacgc
     1501 tctcggcctc gctggcggtg gcgctcttct tcacgccgac gctgggcgca ttgttcggca
     1561 aggccgcgcg tgccgacgag cccggttcag ggcgagtatc cggcgcgcgc actgtaaagt
     1621 cgccgcgctg gccgctcgcc tcgctcgcca gcgcggccgc gccggtgccg catgccgaga
     1681 ctgcgggtga ccgcgggccc tatatgcgca cggtgcggct tgtgttgcgc tatccgggca
     1741 tgaccctggc actggccgcg gtcctgctct tcgcggtgca cgttgcctac ggaaagttcg
     1801 ggcgcggcgt ggaattcttc cccaaagtcg agcccgacta cggacaggtc gtcgtgcatg
     1861 cccgcggcaa tctctcgctc gacgagaaaa accgtctcgt gaccgaggtt gagaagcgcg
     1921 tgcttgcgtt cgatgggctc aagacggttt acacccgcat cggcgagcag ccacgcggca
     1981 tgagcgagct caccgaggat acgatcggcg tgatcctgtt cgagttttcc gactggcgca
     2041 gccgagcccc cgcacacgag atcatggacg agatccgcgc caagaccgcc gatatcgccg
     2101 gcatcctgat cgaggtaacc gcgccgcgcg ccggcccgcc gaccggcaag ccgatccaag
     2161 tgcagctcgg ggcgctcgac ccggcggagc ttcccgcggc cgcgaccaag gtcgccgcca
     2221 tgctggccgc gcgcagcgac atccgcgatc tcgacgacgg tctgccgctc cccggcatcg
     2281 attggaagat cgaggtcaac aaatcggaag ccgcgaaata cggcgccggc atcaacaccg
     2341 tcggcagcgc cgtccagctc gtcaccaacg gtctcaaggc caccgaatac cggccggtcg
     2401 acagcgacaa gtcggtggac atcctggtgc gctttccgcc cgagcgccgc agcctcgacc
     2461 agatcgacga tctgcgcgtg cagacgcagg cgggacacgt gccaatcggc aatttcgtgc
     2521 agcgcgtgcc ggcgccgcgt gtcggctaca tcaatcgggt caacggcagc cgcgtgatca
     2581 cggtctccgc caacgttgcc gaaggcgtac agaccgcgat cattcagcag gagattgggg
     2641 ccgcgctcgc caaggccgac ctcggttccg gcgtaacgtt caaactcaag ggcgaggacg
     2701 aggagcgcgc caaggcctcg gcgttcctgc tcaaggcatt cggcaccgcg atctttctca
     2761 ttttcgcgat cctcctcgcg caattcaaca agctgacctc ggtcggcctg gtgctcacgg
     2821 ccgtcgtgct ctcgacgttc ggcgtgatgc tcgggctcat ggtcatgggc cagccgttcg
     2881 gcgtcgttat ggccggcatc ggcgtcatcg ccaatgctgg cgtgatcgtg aacaacaata
     2941 tcgtgctgat cgacacctat gatcgcttgc gcggcgaagg tgtcgctgcc tacgacgcga
     3001 tcatcgaaac ctgccgcgaa cgtgcgcgac cggtcgtcct caccgcggtg accgcaatcc
     3061 tgggcgtatt gccgatcgcg ttcggcatga atatcgagtt cctctcgcgc gagatcacgg
     3121 tcggcgcacc ggcgacgcaa tggtggatca atctctcgac cgcgatcgtg ttcgggctcg
     3181 gcttcgccac catgctgacg ctgatcgtca cgccggcggc gttgatggtg atcgccaatc
     3241 tgcgcgagcg ccgtttgcgc atcgtggcgg cgctgcgcac gtggcggcgg cggccggcgt
     3301 ggggtcgctc gtaagcgcgt ccgagcaggg cggcggcatc tgcgctgaag gacttcgatt
     3361 gtgccgccgg tgataggagc ggccgagacg ccctatcggg ctcgatctcg cagacaaacc
     3421 cgacacggcc tcgctggcgc ccgagcccta tgctccctcg tcatggcctc gtcatgggca
     3481 atggacacca ggggggcgag ggtggctcaa tatagctggg acggcccgga cgccgcgcga
     3541 ttgggaggag cacatgtatc ggcatgtttt gatcccaacc gacggctcgg agcttgccgc
     3601 tagggcggtg cgccatggat tgtcgcttgc caaattcgtc ggggcaaagg tgaccgcatt
     3661 gacggtggag gcgtcgttcg atgtctacac agtcccggct tccagggtct atgcgatgtc
     3721 tggcgctttt gccgagcatg tcgagcgcgc caaagcgcac gcgcagagga tactcgatgg
     3781 cgttgccgaa caagctcgcg cggctggggt cgtgtgcgac acggtgcagg tcgaagaaga
     3841 ccacccatac gaagccatca tcgtgaccgc cgagcagagg ggttgcgacc tcatcgtcat
     3901 ggcctcgcac ggacgcagcg gcattgctgc cgtcgtgctc ggcagcgtga ccaccaaggt
     3961 gcttacgcat acgaaaattc cggttcttgt ttgccattga cgcggccatg actgcgaatg
     4021 ccatgccaca ggcgatctcc gttgaaccag cggtatagtc gggcgagaat gattgcacac
     4081 tggttggacg gcattcagct atgacgcgac gtatctggcg ctccggcgta aatcttcgcc
     4141 gccggctcta cgagatcctg gagcacggtc cgatcggcga tcgcaccgga ctcatcgtca
     4201 gccgcctgat cgtcctcctg atcgtcacca atctcatcgc catgacgctc gattcggtgc
     4261 cggcgttgga ggcgcaatat ggccctctgt tcctcgcgat cgagctgtta tcgctgatcg
     4321 ccttcaccat cgaatacgca ctgcgcgtct gggtcgcggc cgagcacgcg ccgtaccggc
     4381 attcgagcga acgcaaggcg cgatggaagt tcgtgaccag cccgctcggc gtcatcgacc
     4441 tgctagcggt cctgccgttc tggtttgcac tcgtgctgcc ggccgatctg cgggtccttt
     4501 tggtatttcg aatggtgcgt tttctcaaat tggcgcgtta ctcgcccgcg atgcgctcgc
     4561 tgttggacgc gctttacaac gagcgacgtg ctttgttcgg ctgcttcgtg atcttgctgg
     4621 gggcaacgct cgtcgccgcc agcatcatgc atgtgatcga acgccatgcg cagcccgaca
     4681 aattcggcac cattcccgac gcgatgtggt gggcaatcgt cacgctgggc acgatcggct
     4741 atggcgacgt tgttccagtg accgcgctgg gacgcatcgt agcctcgatc acgatcttcg
     4801 ttggcttgat catggtcgcc ttgcccatcg gcattgtcgc aaccgcgttc gccgaggaga
     4861 tccatcgccg cgacttcgtc gtcacctggg gaatggtcgc ccgcgtgcct ttgttcgcgg
     4921 aactcgaggc aacggaaatc gccgacatca tgcgactgct gcacgcgcag caagtcgaag
     4981 gcggtgacgt catcaccagg cgcggcgagc tcgcccattc gatgtatttc atcgcggatg
     5041 gagaggtgga aatcgagctc aaacaggagc gcgttcggct cggcgccggt cacttcttcg
     5101 gcgagatcgc ggcgctgcgc cg
//
LOCUS       DATCWM010000152         2449 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_433287, whole genome shotgun sequence.
ACCESSION   DATCWM010000152 DATCWM010000000
VERSION     DATCWM010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2449)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2449)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2449
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_433287"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..830)
                     /locus_tag="VIQ50_02850"
     CDS             complement(<1..830)
                     /locus_tag="VIQ50_02850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012631264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEY9359345.1"
                     /translation="MMGRLNQDHGRLFYSFCLDDAVPGDHRVREIAAVLDLSWVHVEL
                     RPFYSRMGRPSVDPALMIRMLIIGYVFAIRSERALCREVQVNLAYRWFCGLSIEDRIP
                     DHSAFSRARNERFRDSGIFRQVFERVVEACLAAGLVGGEGFAVDASLIAADANKQRSI
                     PGSEWSKSRDPASASRAVKEYLATLDDAAFGAATDVEPKFVSPSDPAAQWTGAMRGPA
                     FFAYADNYLIDVKCGVIMDVEASRAVRQAEVGAAKTMIDRTADRFGLRPQRLAGDTAY
                     G"
     gene            979..1992
                     /locus_tag="VIQ50_02855"
     CDS             979..1992
                     /locus_tag="VIQ50_02855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015821243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEY9359346.1"
                     /translation="MEHFAGLDVSMKETHVCVVDCDGDVALETMATTLPEAIAEALAR
                     APSCQRVVLETGRMAPTLYHGLEALGVPVICIESRQAHLALKSLATHKTDRNDARGLA
                     QLARTGFFKPVHVKSLPAHAVRSLILARKKLVGQRVTLENQIRGLAVVFGIRLPRGLS
                     PAFAKQVTSSSQGVAGLACAMTGLLAARNAVLEAVTAIDRDMKRLARSSEACRRLMTI
                     PGVGQLTALAFIAAIDDPERFRRSRDVGAYLGLVPRRYQSGEVDYTGSISKCGDRRVR
                     TLLYEAANVMLTRYRGKLALKDWAFDIGRRSTMRKARIALARRLAIIMHAMLRHGTEF
                     RPA"
BASE COUNT          475 a          806 c          784 g          384 t
ORIGIN      
        1 ccataggcgg tgtcgccggc cagccgctgc ggacgcagac cgaagcgatc ggcggtgcgg
       61 tcgatcatgg tcttggctgc cccgacctcc gcctggcgaa ccgcgcgcga ggcttcgaca
      121 tccatgatga cgccgcactt cacatcgatg aggtaattgt cggcgtaggc gaagaacgcc
      181 ggaccccgca tcgcgccggt ccattgagcg gccggatcgg atggcgacac gaacttcggc
      241 tcgacatcag tggcagcgcc aaacgccgcg tcatcgaggg tggccagata ttccttcacg
      301 gctctactgg cgctcgcggg atcacgcgac ttgctccact ccgagcccgg gatcgaacgc
      361 tgcttgttgg cgtcggccgc tatcaggctg gcatcgaccg cgaagccttc gccaccgacc
      421 aaaccggccg ccaggcaggc ctcgacgaca cgctcgaaca cctggcggaa gatgccgctg
      481 tcgcggaacc gctcattgcg ggcgcgcgag aatgctgaat ggtccggaat ccggtcctcg
      541 atgctcaagc cgcagaacca gcgataggcc aagttcacct gcacctcgcg gcacagcgcc
      601 cgttcggagc ggatcgcgaa cacatagccg atgatcagca tccggatcat gagcgccgga
      661 tcgaccgatg ggcgacccat ccgagagtaa aagggcctca gctcgacgtg cacccaggac
      721 agatccagga ccgcggcgat ctcacggaca cggtgatcgc cgggaacggc gtcatcgaga
      781 cagaatgaat agaacagccg cccatgatcc tgattaagcc gccccatcat cgacagcccc
      841 cgccgctgat tcgctcgtaa acaacggaat cacgcggcaa ccatgccggc aaccgacttc
      901 cacaacatgg ggtaatgagg cggctgctct tccgggagtc cgatacgatt ggctccccaa
      961 cgcgaaagga gagcggccat ggaacacttt gctggattag atgtctcgat gaaagagacg
     1021 cacgtctgcg ttgtcgattg cgacggcgac gttgcgctgg agaccatggc aacgaccctg
     1081 cctgaggcga ttgcggaggc cctggcgagg gcaccaagct gtcagcgggt cgtgctcgag
     1141 accggccgca tggccccgac gctctatcat gggcttgagg ctctgggcgt gccggtgatc
     1201 tgcatcgaga gccggcaggc tcatctggcg ctgaagtcgc tggccacgca caagaccgat
     1261 cgcaacgatg cccgcgggct ggcgcaactg gcacgtaccg gtttcttcaa acccgtccac
     1321 gtgaagtcgc tgccggccca tgccgtccgg tcgctgatcc ttgcgcgcaa gaagctggtc
     1381 ggccagcgag tcacgctcga gaaccagatc cggggcctgg cggtcgtgtt cgggatccgg
     1441 ctgccgcgcg ggctgagccc ggcttttgcg aagcaggtaa ccagcagtag ccaaggcgtt
     1501 gccgggttgg cctgcgcaat gacggggctg ctggcggcgc gcaatgccgt gctggaggcg
     1561 gtcaccgcga tcgatcgcga catgaagcgt ctcgcgcgtt cgtcggaagc ctgccggcgg
     1621 ctgatgacca ttcccggggt cggccagctg acggcgctcg ccttcatcgc ggccatcgat
     1681 gaccccgaac gcttccggcg atcgcgcgat gtgggcgcct atctgggtct ggtgccccgg
     1741 cgctaccagt cgggtgaggt cgactacacc ggcagcatct cgaagtgcgg cgaccgacgg
     1801 gtccgcacgc tgctctacga ggccgccaac gtcatgctca cgcgctatag aggcaagctc
     1861 gcgctcaagg actgggcatt cgacatcggc cggcgctcga ccatgcgcaa ggcgcggatc
     1921 gcgctcgcgc gccggctcgc catcatcatg catgccatgc tccggcacgg caccgagttc
     1981 agacccgctt aggttcggcg cggcagcaga caggagaccg agacgagctc ccgagcggag
     2041 catggcccga gggagggcgt gggtgatggc gccgattttg tcgcatgcgg tcgatctaag
     2101 cggccgactg cgtctgcaac caagccaccc cacacccagc tgaccccatc aagtgccatc
     2161 gagcacgcag agaacgcagg cacccaaagg cagcgcacaa ccgctcagga tcagagtggc
     2221 caccccttga ctcattagag aacaaaatcg gcgcacagcg gacattccaa tcgcgccaag
     2281 cgcggctttg aagctccccg gggcaaagat cccggatcgg agggcaactg cggggcgttc
     2341 aactagcccc atcctatgat gatttccgga gatttgagca ccttagcgga ctgcgccggg
     2401 gcttggcacg cgagcgctcg gcgctatcgc tcaccccaag ccacgagcg
//
LOCUS       DATCWM010000153         3323 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_28394, whole genome shotgun sequence.
ACCESSION   DATCWM010000153 DATCWM010000000
VERSION     DATCWM010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3323
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28394"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..837
                     /locus_tag="VIQ50_02860"
     CDS             <1..837
                     /locus_tag="VIQ50_02860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018323150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1C"
                     /protein_id="HEY9359347.1"
                     /translation="ASRFAARLEQAGGSFTLPPNEVPGLAIGLGGVGVTLNDLVALYA
                     GLARLGTTVPLTERRASGDETATSRRLLDPTAAWYVGSILLGTPPPENAAGGRIAFKT
                     GTSYGYRDAWSVGFDGKRTIGVWVGRPDGAPVAGLVGRAVAAPILFDAFARAGKTMPL
                     PAAPKGALVIGMSKLPPPLQRFRGGLLAGESAEPQLRIMFPPNGARLELANDSAGRLD
                     PIALKVTGGSGVLTVLVNGLPLPTAAGRRSLSFEPQGPGFVRLTVVDGRGATDSVVVR
                     LQ"
     gene            1009..>3323
                     /locus_tag="VIQ50_02865"
     CDS             1009..>3323
                     /locus_tag="VIQ50_02865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEY9359348.1"
                     /translation="MCDDVRLCLQHQLLGAVMDKINRCSHRIRAAVKITSFLLSYLAF
                     AAASVNEVNGQASPPGQTGPATESASPPAAPATQPASPPVAPAAQPSSPPAAPAAESA
                     SPPATPAQEPPSAQSGTSSSPAGTPAQSDTTLPQVTVEAPRSKPRPTSTVQTSQLSER
                     PRIAPAQVAPPPSAPDSAAAIQAAWPASQTQDARTGTVGVFANSTSAGTKINTPLVNI
                     PQSLSVVTREFISDNSFQNLTDVTRYVPGVAIHQGEGNRDELIIRGVDSSANFFVNGF
                     RDDVQYFRDLYNAQSVEILKGPSAITFGRASGGGLLNRTLKEADGQRIYEATAQTGSY
                     DNRRFTLDAGQAVNEVAAARLNAMYEKSDTFRDFGWLERWGINPTVTLKVDDATKVRF
                     SYEYFHDDRTADRGNPSQGRSFVPPSSTSLYPAFPFAPAGDLTAYYGSPNLNRAKATV
                     NTVMAFIDHDFENGLTAKNGTYFADFKKFYQNVYPGNGPLSGAVNPTDTSFNRAAYNH
                     MTNRQNTFNDTDFIYKVYTGPLFHTIGFGTELGRQAGIDVRNTGIFPNGTNTEADNPF
                     EPTYFGAVNFVHQYPGFFSPGVTTPDSNSLYQLDTQSAYARDTMEVTPWLQLIGAVRV
                     DRFDESALDLNTKTLRNRVDKLVSPANAVIIKPAESLSIYYSYQVSYLPSSGDQFSAF
                     TDGSVILKPQGFTQREVGVKWQALPQLLYTAAAYDLIRTNVPLPDPNNPGFFILSGSN
                     RIRGFETELKGYINDRWQSWLGYAYTDARVT"
BASE COUNT          673 a         1075 c          968 g          607 t
ORIGIN      
        1 gcgagccgct tcgcggcacg gcttgaacaa gcaggcggat ccttcacgct tccgccgaat
       61 gaagtgccgg gcctcgcgat cggtcttggt ggcgtcgggg tgacgcttaa cgatctcgtt
      121 gcgctctatg ccgggttggc ccggctcggc accacagtgc cgctcacgga gcgccgcgcg
      181 agcggcgatg aaacagcgac ctcgcgccgg ctgttggatc cgacggcggc ctggtacgtc
      241 ggcagcatcc tgctgggtac gccaccacct gagaacgctg ccggcggccg catcgctttc
      301 aagaccggca cgtcctacgg ataccgggac gcgtggtcag tgggcttcga cgggaaacgc
      361 acgatcgggg tctgggtcgg ccggcccgat ggcgcgccgg tggcgggcct cgtggggcgc
      421 gcagtcgcgg cgccgatcct attcgacgcg ttcgcacgcg ccggcaagac gatgccgctg
      481 cctgcggcgc ccaaaggcgc gctcgtcatt ggaatgagca aactaccgcc gccgctacag
      541 cgcttccgtg gaggtctgct tgcgggcgag agcgccgaac ctcagcttcg gatcatgttc
      601 ccacccaatg gcgccaggct cgaacttgca aacgatagcg ccggcaggct cgatccgatc
      661 gcgctcaagg tgacgggcgg aagtggggtg ctgaccgtcc tggtcaacgg cctgccattg
      721 ccgaccgcag ccggacggcg cagcttgtca ttcgagccac aaggccctgg cttcgtgcgc
      781 ctcaccgtag tcgatggccg cggcgcgacc gacagcgtcg tggtgcgatt gcaatagccg
      841 cagtcttacg tgtggctgaa ttacaacgtc ttcatgaaat ccgatttggt cgtctaattc
      901 aatacttgtc accggcccgg aaacctcccg agcatgaaca agctagttgt tgtatttgaa
      961 ttagaataaa caacggagca gaaattcgtc gcgctgaaat tggaagactt gtgcgacgac
     1021 gttcgtttat gtctccaaca tcagttgttg ggggctgtca tggataagat aaatcgatgt
     1081 tctcatcgca tcagagctgc agtgaagata acatcgtttt tgctcagcta tcttgcattc
     1141 gcggccgcga gtgtaaatga agtgaacggg caggcatcgc cacctgggca aaccgggccg
     1201 gcaactgagt ctgcgtctcc gccagccgcg ccagcaactc agcctgcatc cccgccggtc
     1261 gcgccggcag ctcagccttc atctccgccg gccgcgccag cagcagaatc tgcatctccg
     1321 ccggccacgc cagcgcagga acctccttcc gcacaatcgg gcacgtcctc atcccccgca
     1381 ggtacgccgg cgcaatcgga caccacattg ccgcaggtca ccgttgaggc cccacgttcg
     1441 aagccgcgcc ccacgtcgac agtgcagaca tcgcagctga gcgaacggcc gcgaattgcg
     1501 ccagcgcaag tcgcgccacc accaagcgcg cccgattcag ccgcggcgat acaggcggcc
     1561 tggccggcca gccaaacgca agatgcacgc acgggtacgg tcggcgtgtt tgcgaacagc
     1621 acgtcggcgg ggaccaagat caacacgcct ctggtcaaca ttccgcagtc gctcagtgtg
     1681 gtgacgcggg agttcatctc cgacaacagc tttcagaacc tcaccgacgt cacgcgctac
     1741 gtgccgggcg tcgccatcca ccagggcgaa ggcaaccgcg acgagctcat catccgcggc
     1801 gtggactcga gcgcgaactt tttcgtcaac gggttccgcg acgacgtgca gtacttccgc
     1861 gatctctaca atgcccagag cgtcgagatc ctgaagggac cgagtgctat caccttcggt
     1921 cgcgcgtccg gcgggggtct gctcaaccgc acgctgaagg aggccgacgg gcagaggata
     1981 tacgaggcga ccgcgcagac cggatcctat gacaaccggc gcttcacgct cgacgcgggg
     2041 caagccgtca acgaggtggc cgccgcgcgc ctcaatgcca tgtacgagaa aagcgacacg
     2101 tttcgggatt tcggctggct cgagcgctgg ggcatcaatc cgacggtaac gctcaaagtc
     2161 gacgacgcca ccaaggtccg gttcagctac gaatacttcc acgacgaccg caccgccgat
     2221 cgcggcaatc catcgcaggg gcgaagcttc gtaccgccgt catcgacgtc gttgtatccg
     2281 gcctttccgt tcgctcccgc cggggacctg accgcgtact acggcagccc aaatctcaac
     2341 cgtgcgaagg ccaccgtgaa caccgtgatg gcctttatcg accacgattt cgaaaacgga
     2401 ttgacggcga agaacgggac ctattttgcc gacttcaaga agttctatca gaacgtctat
     2461 cccggcaacg gcccgctgtc gggggcggtc aatccgaccg atacctcgtt caatcgcgcc
     2521 gcctacaatc acatgacgaa ccgccagaat accttcaacg acaccgactt catctataaa
     2581 gtctatacgg ggccgctgtt tcacacgatc ggcttcggaa cggaactcgg ccggcaagcc
     2641 ggcatcgatg tccgcaacac cggaatattc cccaacggca ccaacaccga ggcggacaat
     2701 ccgtttgagc cgacgtattt cggggccgtc aatttcgtgc accagtaccc gggatttttc
     2761 tcccccggcg tcaccacgcc tgattccaac agcctatacc agctcgacac tcagtcggct
     2821 tatgcgcgcg atacgatgga ggtcacgccg tggctgcaat tgatcggcgc agtgcgtgtc
     2881 gatcgcttcg atgaatcggc actggacctg aatacgaaga cgcttcgcaa ccgcgtcgac
     2941 aaattggtgt cgccggcgaa cgccgtaatc ataaagccgg ccgaaagtct gtcgatctat
     3001 tattcctacc aggtttccta tcttccgtcc tccggcgacc agttcagcgc gttcaccgac
     3061 ggaagcgtca tcctcaagcc gcagggattc actcaacggg aagtcggcgt caaatggcaa
     3121 gctttgccgc agctgctata taccgccgca gcatacgatt tgattcgcac caacgttccg
     3181 ctgcccgatc cgaacaatcc cgggtttttc atcttgtctg gcagcaacag gattcgcggc
     3241 ttcgagaccg agctgaaggg ttatatcaac gaccgttggc aatcctggct cggttacgcc
     3301 tacaccgatg cgcgggtgac gag
//
LOCUS       DATCWM010000154         5677 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_238892, whole genome shotgun sequence.
ACCESSION   DATCWM010000154 DATCWM010000000
VERSION     DATCWM010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5677
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_238892"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            279..2642
                     /locus_tag="VIQ50_02870"
     CDS             279..2642
                     /locus_tag="VIQ50_02870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEY9359349.1"
                     /translation="MNLQNDPEAFALMKFGIGQPVPRSEDPILVRGEGSYTDDLKLDG
                     EAYAVMVRSHVPHGVIKAIETSAARSMPGVLGVYTGADLAGYGLLKCIVPFKNRDGSP
                     MRQPPRPALVTDKVRFVGDPVAFVVAETLLQAKDAAEAVRVEIDSLPAVVRPEEAARP
                     GAPLLYEEAPDNVALDYHFGDSEQVAAAFAKAAHVTRLKLVNSRVVVNAMEPRAAIGV
                     YDQSGGRFTLHAPSQGVFGLRANMADILKVEPKQVRILTGHVGGSFGMKAAPFPEYVC
                     VLHAARSLGRPVKWTDERSGSFVSDSHGRDHELTAELALAADGAFLAVRITNFGNMGA
                     FLSPVAPMPSTINIVKNVQSVYRTPLIEVSTKCVFTNTSHVSAYRGAGRPEGNYYMER
                     LIDAAAAEMDIDRLELRRRNQIRPREIPIKTASGSNYDSGDFPGVLKHALEAADVKGF
                     ARRKRESRKRGKVRGLGVGNFLEVTAPPSKEMGGIRFEADGTVTIISGTLDYGQGHAA
                     PFAQVLSERLGVPFERIRLLQGDSDELLAGGGTGGSKSIMHSGTAIVEAAAKVIEQGK
                     QIASHVLEASAADIEFANGRFVIAGTDRAIGIMELAARLRAGPKLPESVPATLDVRHV
                     SEGPGASTYPNGCHVCEVELDPDTGTIEVVKYTSVNDFGTVVNPPIVEGQLHGGVIQG
                     IGQALMEMTVYDGDGHFLTGSFMDYALPRASDSPDVAVIQHPVPAKTNVLGVKGCGEA
                     GCAGSLTSVMNAVAHALSEFGIRHVDMPATPYRVWSAIQEARAARTA"
     gene            2669..3898
                     /locus_tag="VIQ50_02875"
     CDS             2669..3898
                     /locus_tag="VIQ50_02875"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9359350.1"
                     /translation="MTQAAEALTVNRASETKLVAGVCFAHLVSHYYMLTLAPLFAFIR
                     ADFGVTYTELSLALTAFNVVSAVSQTPVGFFVDRTGPRVNLIGGLLLGSAALAIAGAA
                     NSFWVFVAMFAVMGLANTVYHPADYTLLSERVSSRRMTQVFSFHTCSGMIGSAVAPVS
                     LLFMQAAVGWRGAFLCSALLGVAAALFLALQGELPLVHPAHAKPHGGDKAASGSSVVG
                     WRLLLSAPILLNLAFFVLLSMVGGGLNQYLVVALGALYATPPALANTALTGLLTMSAI
                     GVLLGGALAARTARHSVVACMGLLVTAAASTLIAFVDLGALVLVLIVSLSGLASGTAM
                     PSRDMIVRSVTPAGSFGKVFGFVTTGLHVGGIVAPLIFAQFLDHGHPRAVFLFVAACA
                     LVAVATVVFGMSGRRTA"
     gene            4053..4126
                     /locus_tag="VIQ50_02880"
     tRNA            4053..4126
                     /locus_tag="VIQ50_02880"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4085..4087,aa:Gln,seq:ctg)
     gene            4390..4512
                     /locus_tag="VIQ50_02885"
     CDS             4390..4512
                     /locus_tag="VIQ50_02885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359351.1"
                     /translation="MLAWIIAVVLAIGLIWSVAAMSNLVPVVDSGSAAISRPAE"
     gene            4565..4828
                     /locus_tag="VIQ50_02890"
     CDS             4565..4828
                     /locus_tag="VIQ50_02890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359352.1"
                     /translation="MARLKGWKIIHGGLGMGKVLTSLAFVAAMLALASSEASAMNFLC
                     QAVGPRSVAYGRAFFAADAKWQALLRCERRSGICIISYCVPTN"
BASE COUNT          945 a         1893 c         1765 g         1074 t
ORIGIN      
        1 cctccatcaa gttccttccc gccgcgccga agccttgcgt agctcgacgg cccgcggcct
       61 tgtccaaacc aagatcgcat caactgtaac acgcgggcgc tctgcgcaac agatgcgcgc
      121 cgcgcgcatg gcgcagcccg aaatccttgt cgaggcggct tggctccttt atctcaaacc
      181 gcgtcgcccg accgactctg cgccggcggg caggcatatg gagctatcgc ctgcggccga
      241 ccggcttgca ggcgatctat tgatcaaggc attcgttgat gaatctgcaa aacgatccgg
      301 aggccttcgc gctgatgaag ttcggcatcg gccagccggt gccgcgcagc gaggatccga
      361 tcctggtgcg gggagaaggc tcctacaccg acgatctcaa gctcgatggc gaggcctatg
      421 cggtgatggt ccgcagccac gttccccatg gcgtgatcaa ggcgatcgag acctcggcgg
      481 cgcggagcat gccgggcgtg cttggcgtct ataccggcgc cgatctcgcc ggctacggcc
      541 ttctcaaatg tatagtgccg ttcaagaacc gcgacggctc gcccatgcgg cagccgccgc
      601 ggccggcgct ggtgaccgac aaggtacgtt tcgtcggcga tcccgtcgcc ttcgtcgtcg
      661 ccgagacgct gttgcaggcg aaggacgccg ccgaggcggt gagggtcgag atcgattccc
      721 tgcccgccgt ggtgcggccc gaggaggctg cacgccccgg tgcgccgctc ctctatgagg
      781 aagcgccgga caacgtcgcg ctcgattatc attttggcga cagcgagcag gtcgcggccg
      841 ctttcgccaa ggccgcgcac gtgacacggc tcaagctcgt caacagccgc gtggtcgtca
      901 acgccatgga gcctcgggct gcgatcgggg tctacgacca atccggcgga cgcttcacct
      961 tacatgcgcc ctcacagggc gtgttcggcc tgcgcgccaa tatggccgac attctcaagg
     1021 tcgagcccaa acaggtgcgc atcttgaccg gccacgtggg cggctcgttc ggcatgaagg
     1081 cggcgccgtt tccggagtac gtctgcgtgc tgcacgcggc gcgctcgctc ggccggccag
     1141 taaaatggac cgacgaacgc tcgggaagct ttgtctccga cagccacggc cgcgaccatg
     1201 agctcaccgc cgagctcgcg ctcgctgccg acggcgcttt cctcgcagta cgcatcacca
     1261 atttcggcaa tatgggcgcc tttctctccc ctgtggcgcc gatgccgtcg accatcaaca
     1321 tcgtcaagaa cgtgcaaagc gtctaccgca cgcccttgat cgaagtctcc accaagtgcg
     1381 tgttcaccaa cacctcccac gtctccgcct atcgtggcgc cggccggccc gagggcaact
     1441 actacatgga gcggttgatc gatgctgccg ccgccgagat ggacatcgat cgtctggagc
     1501 tgcgccggcg caaccagatc agaccgcgcg agatcccgat caagacggcc tccgggagca
     1561 actacgacag cggcgacttt cccggcgtgc tcaagcacgc gctcgaggcg gccgatgtca
     1621 agggcttcgc gcgccgcaaa cgcgagagcc gcaaacgcgg aaaagtgcgc gggctcggcg
     1681 tcggcaactt tctcgaggtt accgcgccgc cgagcaagga aatgggcggc atccgcttcg
     1741 aggccgacgg caccgtcacc atcatcagcg gcacgcttga ctacgggcag ggacacgcgg
     1801 cgccattcgc gcaggtgctg agcgagcggc tcggcgtccc gttcgagcgc atccgtctct
     1861 tgcaaggcga cagcgacgag ctcttggcgg ggggcggcac cggtggctcg aaatcgatca
     1921 tgcacagcgg cactgccatt gtcgaagccg ccgccaaggt gatcgagcag ggcaaacaga
     1981 tcgcctcgca cgtgctggaa gcctccgccg ccgacatcga attcgcgaac ggccgcttcg
     2041 tcatcgccgg cacggatcgc gcgatcggca tcatggagct ggcggcacgg ctgcgcgccg
     2101 gccccaagct gccggagagc gtgcccgcga cgctcgacgt gcgccacgtg agcgagggcc
     2161 ccggcgcctc cacgtatccc aacggatgcc acgtgtgcga ggtcgagctc gatccagaca
     2221 ccggaacgat cgaggtggtg aagtacacct cggtcaacga tttcggcacc gtcgtcaatc
     2281 cgccgatcgt cgagggccaa ctgcatggcg gcgtgatcca gggaatcggc caagcgctca
     2341 tggagatgac cgtttatgac ggcgacggcc atttcctgac cgggtcgttc atggattatg
     2401 cgcttccgcg cgcgagcgac tcgcccgacg tcgccgtcat ccagcatccg gttccggcga
     2461 agaccaacgt gctcggcgtg aagggctgcg gggaagccgg ctgcgccggc tcgctcacct
     2521 cggtgatgaa tgcggtcgcc catgcgctgt ccgaattcgg cattcggcac gtggacatgc
     2581 cggcaacgcc ctaccgcgtg tggagcgcca ttcaagaagc gcgcgcggcg cgcaccgcgt
     2641 gagcggctgc gccgcagcaa aaggaaaaat gactcaagcc gccgaagccc tcactgttaa
     2701 ccgcgccagc gagaccaaac tcgtcgccgg cgtgtgcttt gcgcatctcg tgagccacta
     2761 ctacatgctc acgcttgcgc cgctgttcgc gttcatacgc gcggacttcg gcgtgaccta
     2821 taccgagctc agcctggcgc tcaccgcctt caacgtggtc tcggcggtat cgcagacacc
     2881 ggtcggcttc ttcgtcgacc gcaccgggcc gcgcgtcaat ctgatcggcg ggctgctctt
     2941 gggctccgcc gccctcgcca tcgcgggcgc cgccaactcg ttctgggtgt tcgtcgcgat
     3001 gttcgccgtg atgggcctcg ccaacacggt ctatcatccc gccgactata cgctcctctc
     3061 cgagcgcgtg tcgtcgcggc gcatgaccca ggtgttttcg ttccacacct gctcgggcat
     3121 gatcggctcg gcggtcgcgc cggtgagcct gctgttcatg caggccgcgg tgggatggcg
     3181 cggcgcattt ctctgctcgg cgctgctcgg cgtcgcggcg gcgttgtttc tggcgctgca
     3241 gggcgagctg cccctcgtgc acccggccca tgcgaagccg cacggcggcg acaaggcagc
     3301 gagcgggtcg agcgtcgtcg gttggcgcct tcttctgtcg gcgccgatcc tgctcaacct
     3361 cgctttcttt gtcctgctgt cgatggtcgg cggcgggctc aaccagtatc tcgttgtggc
     3421 actcggcgcg ctctacgcta cgccgcccgc gctcgccaat accgcgctca ccggtctcct
     3481 caccatgagc gcgatcggcg tcctgctcgg cggcgcgctc gccgcgcgca ccgcgcgcca
     3541 tagcgtcgtg gcgtgcatgg gattgctggt gacggccgcc gccagcacgc tgatcgcctt
     3601 cgtcgatctt ggcgcgcttg tgctcgttct catcgtctcg ctgagcggtc tcgccagcgg
     3661 cacggccatg ccctcgcgcg acatgatcgt gcgctcggtc accccggcag gctccttcgg
     3721 caaggtgttc ggcttcgtca ccaccggctt gcacgtcggc ggcatcgtgg cgccgttgat
     3781 cttcgcccag ttcctcgacc acgggcaccc gcgcgcggtg ttcctgttcg tggccgcctg
     3841 cgcgctggtc gccgtcgcca ccgtcgtgtt cggcatgtcc ggccggcgca cggcgtgagc
     3901 gccgcacccg ctgccgatcg cggccgcctc tgcaggggtt gcggcttgga aagccgcccg
     3961 agatgcccta aatctcctgg cgaccggtcc ggccctgcca accagaagac gcggcgcggc
     4021 tggagatgaa gctaagcttg cgcccttagc attgggggat agttcaatgg tagaacagcg
     4081 gactctgact ccgttaatct aggttcgaat cctagtcccc cagccataaa tccttattca
     4141 tcgccacttc ttgagtgttc ggcgcccacc aagcgcccat ttcatgtcgc gcatgaacgc
     4201 gacatgcgcc gcgcgcgcac gcaccggctt tcgcaagggc gcgatcggca tatttccgtc
     4261 gccggctctt cgcgaacgcc gccccttcct cgggctttga tttcagaagg tttggccatc
     4321 tgtgaactat ctcacatcgg ggcggcgaaa atatcggcaa gctccatgcg acgtagaggg
     4381 aatgcaaaaa tgcttgcatg gatcatcgcc gtcgtgctcg cgatcggcct aatctggtcg
     4441 gtcgccgcga tgtcgaactt ggtccccgtg gtcgactccg gctcggccgc gatatcgcgt
     4501 cctgccgagt aactcgccac tggctcaagc tcccaatcgg ccgccacaaa agagccgcac
     4561 cgcggtggca cggctcaagg gctggaaaat cattcacggg gggttgggta tgggtaaagt
     4621 tctgacttct ctcgcattcg tggccgcgat gcttgcgctt gcttcctccg aggcctcggc
     4681 catgaatttc ctttgccaag ctgtcggccc gcgctcggtt gcttacggtc gcgccttctt
     4741 tgcggctgat gccaagtggc aggcccttct ccggtgcgaa cggcgcagcg ggatttgcat
     4801 catcagctat tgtgtcccga cgaattgagg gtgatttcgc ccagtcataa gcgatcagtt
     4861 tgatcggtcg ggcacatcgc gcagaatccg atttggggga tcgttcctcc gggctgttca
     4921 aaaagaggcc gcctcatttg gcggcctctg gttagtattg accgaacgtg cgttatcgca
     4981 gcaaaccctc aatcttgtag gaacggaact tcgcgtattt atcgccaatt tccttccgaa
     5041 gattcctgta ccccaggtta ttggcctctg gcggtcttgc gctaggcccg ctgccgcagg
     5101 cgagcggcgc tagtcccatc gctgagaggg tgctgatcac tccaaacccc gaggtcgaca
     5161 cgcggcccat gcttgcaatc cgaatgcttc taattgtggc ctttgcactt gtggcgatcg
     5221 ctagctcgct cgctcgtgaa gacaccaagt gctacagctc gtgcagagcg cgctgcgacg
     5281 ccaggtacgc gtgcgaaggg cgtcatcccg gtccgaactg cttcaccaac ttcaacaagt
     5341 gcagaacctc ctgctggcga atgtgccgtc actaaaggcg cactcgcaca agggcgctag
     5401 gaaagcgaag ggtatccttc aattaagaaa ccagcttggt aaaggtttat cgagttcccg
     5461 caaaaaactt ggcgatctct tctcatggtc gagccggact gggttgaagc caagcgcttt
     5521 gccgtctgat gcatcgcgga cttcagggac ggacgcgctg caccgagctc tgtatttgaa
     5581 aatcattcgc tgcggggcgc cacgacaagg tcgagatgtt gaacctcgcc aggccggggc
     5641 gggcgcggtg gcgccccccg ctcgagcacc tgcaggc
//
LOCUS       DATCWM010000155         2135 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_476453, whole genome shotgun sequence.
ACCESSION   DATCWM010000155 DATCWM010000000
VERSION     DATCWM010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2135
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_476453"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1179
                     /locus_tag="VIQ50_02895"
     CDS             <1..1179
                     /locus_tag="VIQ50_02895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY9359353.1"
                     /translation="MAAARLVEELAKRALGRYAVAVIGEEPRLAYNRVLLSALLAREV
                     GFAEIELKPAQWWRDRGVTLRYGMRASAVDPVERELRLSSGTRLSFSKLVFATGSQPV
                     KLDVAGMDLPGVFTFRDIDDVKAIAQTAGKRVVVIGGGLLGLEAAHGLAKAGARVTVL
                     HLMDRLMERQLDVPAGRMLKRAVEGRGIAVRLNAEAARIMGDRRVEAIELRDGGAIAA
                     DAVVVAVGIRPNTELARAAGLKVNRGIAVDDHLETSLQGIHAVGECAEHRGLCYGLVE
                     PAYEQAQVLARRLAGESATYRGSVPAANLKVAGVHVFSAGDFLAATAGAEEIVLSDPG
                     FGVYKKLVIANGRLIGAVLFGDIADGPWYLELIRSGSSIERLRDDLVFGRTLATRAAA
                     "
     gene            1313..>2135
                     /locus_tag="VIQ50_02900"
     CDS             1313..>2135
                     /locus_tag="VIQ50_02900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEY9359354.1"
                     /translation="MNAPSPELPAVRTTCPYCGVGCGLLARPDGYGGAAITGDPAHPA
                     NFGRICSKGSALGETLGLTERLLHPMLRQRDGSLARVDWPDALDRVATGFESIRARHG
                     PDALAFYLSGQLLTEDYYVANKLMKGFIGSSNVDTNSRLCMASSVAGHIRAFGADTVP
                     GTYEDLDHADLLVLVGSNTAWCHPVLFQRMVENKRVRGAKIVVIDPRRTATAEDADLH
                     LPIAPGMDVALFCGLLVYLADLCALDYRHIDAHTKGFENTLAQARAIAPDLASTAR"
BASE COUNT          332 a          703 c          720 g          380 t
ORIGIN      
        1 atggccgcgg cgcgtttggt cgaagagctg gccaaacgcg cgctcggccg atacgcggtg
       61 gccgtgatcg gggaagagcc gcgccttgcc tataatcgcg tgttgctgtc ggcgctgctg
      121 gcgcgcgaag tcggcttcgc cgagatcgag ctcaagccgg cgcagtggtg gcgcgaccgc
      181 ggcgtgacct tgcgttacgg catgcgcgcg agcgcggtcg acccggtcga gcgcgagctc
      241 aggctgtcga gcggcaccag gcttagcttc tccaagctcg tctttgcgac cggctcgcag
      301 ccagtcaagc tcgacgtcgc gggaatggat ctgccgggag tcttcacctt tcgcgacatc
      361 gacgacgtca aggccatcgc tcagaccgca ggtaagcgcg tcgtcgtcat cggcggcggg
      421 ctcctcgggc tcgaagcggc gcatggcctc gccaaagcgg gcgcgcgggt cacggtgctg
      481 catctcatgg acaggctcat ggagcgccag ctcgatgtgc cggcagggcg gatgctcaag
      541 cgcgcggtcg aagggagggg cattgccgtg cgccttaacg ccgaggccgc gcgcatcatg
      601 ggtgaccgcc gcgtcgaggc gattgaattg cgcgacggcg gggcgatcgc ggccgacgcg
      661 gtagtggtgg cggtcggcat caggccaaat acagagctgg cgcgggccgc gggcctcaag
      721 gtcaatcgcg gcatcgccgt cgacgaccat ctggagacaa gcctccaggg catccacgcg
      781 gtcggcgagt gtgccgagca tcgtgggctc tgctatggac tggtggagcc cgcctatgag
      841 caagcgcagg tgctggctcg gcggcttgcc ggggaaagcg cgacctatcg cggcagcgtg
      901 cccgccgcca atctgaaagt ggccggcgtc catgtatttt cggccggtga tttcctcgcc
      961 gccacggccg gcgccgagga gatcgtgctg agcgaccccg gtttcggcgt ctacaagaag
     1021 ctcgtcatcg ccaacggtcg tctcatcggc gcggtgctgt tcggcgatat cgccgacggc
     1081 ccctggtacc tcgagctcat ccgttcggga tcatcgatcg agcggttgcg agacgacctc
     1141 gtgttcggcc gaacgcttgc aactcgcgct gcggcttaga gagccattcc gtgattgcca
     1201 tgcatgaggg cgtcgcgggc tcgccggggc taaatccctt gagaaaggcg cgagcgtccg
     1261 cggtttgccc gcgccgcgtc gcggtgacat cgagacgctg cagcgcacca ccatgaacgc
     1321 gccctcgccc gaactcccgg ccgtgcgcac cacctgtccc tattgtggcg tgggttgtgg
     1381 cctgctggcg cggcccgacg gatatggcgg cgccgcgatc actggcgatc ccgcccatcc
     1441 agcgaatttc ggccgcatct gctcgaaggg ctcggcactc ggcgagacgc tcgggctcac
     1501 cgaacgtctg cttcatccca tgctgcggca gcgggacggg agcctcgcgc gggtcgactg
     1561 gccggatgcg ctcgaccgcg tcgccaccgg cttcgagagc atccgcgcgc ggcacgggcc
     1621 cgatgcgctc gccttctatc tctccggcca actcctgacc gaggactatt acgtcgccaa
     1681 caagctgatg aaaggtttca tcggctcgtc gaacgtagac acgaattcgc gtctgtgcat
     1741 ggcctcctcg gttgccggcc acatccgcgc ctttggcgcc gataccgtcc cgggcaccta
     1801 cgaggacctc gatcacgccg atcttctcgt cctggtcggg tcgaacaccg cttggtgtca
     1861 tccggtgctg ttccagcgca tggtcgagaa caagcgcgtg cgcggcgcca agatcgttgt
     1921 catcgatccc cgccgcaccg caaccgcgga ggatgccgat ctccatcttc cgattgctcc
     1981 gggaatggac gtggcgctgt tctgcggctt gctggtctat ctcgccgatc tctgtgcgct
     2041 cgattatcgc cacatcgatg cgcatacgaa aggcttcgaa aacacgttgg cgcaagcgcg
     2101 cgccatcgcg cccgatcttg cgtcaacggc gagag
//
LOCUS       DATCWM010000156         4192 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_39260, whole genome shotgun sequence.
ACCESSION   DATCWM010000156 DATCWM010000000
VERSION     DATCWM010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4192
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39260"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(34..1419)
                     /locus_tag="VIQ50_02905"
     CDS             complement(34..1419)
                     /locus_tag="VIQ50_02905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9359355.1"
                     /translation="MRKRTSTWIADWNPEDETFWKSTGRSIAQRNLIWSIFAEHLGFS
                     IWLIWSIVATKLPQAGFHYTTDQLFQLVALPGLIGSLMRFPYTFAVTTFGGRNWTVFS
                     AAVLFIPTLALAYFVTQPDTPFWLMLLVAATAGLGGGNFASSMANISFFYPDRMKGWA
                     LGLNAAGGNIGVSGVQLLTPLLLGFGFISLYQATPVAEGLYLQNAGLMWLLPLIIAVI
                     GAFLFMNNLTSARSTFKDQVVIVKRKHTWVMSYIYIGTFGSFIGYSAAFPLLIKTQFP
                     GVTVAIAFLGPLVGSLSRPLGGLLADKIGGAIVTFWNFIVMGAATIGVMYFVDVKNFA
                     GFLTMFLILFVTTGVGNGSTYRMIPAIFREEKRRETKSLGEVARAAALRAAGLESAAA
                     LGFIGAVGACGGYLIPRGFGASIAATGSPHLALAVFLGFYVTCIAATWWYYLRKTTFV
                     SIAPSLAEARV"
     gene            complement(1758..2342)
                     /locus_tag="VIQ50_02910"
     CDS             complement(1758..2342)
                     /locus_tag="VIQ50_02910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ANTAR domain-containing protein"
                     /protein_id="HEY9359356.1"
                     /translation="MQASLKIVIVDENPIRAAVLEDALREAGHAHIVRLDETSQLLAR
                     ICALDPDVVVIDLETPRRAVLEQMFEVSRAVKRPVAMFVDESDKAATEAAVDAGVSAY
                     VVGALRKERIANILDLCVSRFNFVARLREELERARGALEERKVIDRAKGILMTAKNLT
                     EDAAYGLLRKTAMNENKKIAEVAQSVVTAAGMLK"
     gene            complement(2407..2751)
                     /locus_tag="VIQ50_02915"
     CDS             complement(2407..2751)
                     /locus_tag="VIQ50_02915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359357.1"
                     /translation="MGEVAGRHNADALAACPSGEVFEVEIPARRARIFRVDMQIRVEA
                     HAGRAFFAAPTRQQGVRDNRRANKGAIRLRAESIPVDIKVRRPAACSVGAIAQDCATG
                     SRVPAGSAPATN"
     gene            2728..>4192
                     /locus_tag="VIQ50_02920"
     CDS             2728..>4192
                     /locus_tag="VIQ50_02920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003602957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEY9359358.1"
                     /translation="MATGDFTHPAWSAELKQKLVPAEPGLYRLRDDIEQAISQTLPAA
                     CRAPVRFMLEVEISTIYKKADRTRKIHHLIYAPDFETVDRMSARLARIGNIASDGRPI
                     LGLDSRDLLEIALESGPHAYLVPAHIWTPWFAALGSQSGFDSITECYGDLADRIFAVE
                     TGLSSDPPMNWRVSFLDRYRLTSNSDAHSPGKLGREATTFDCERDYFAIKHALETGHG
                     YVGTVEFFPDEGKYHLDGHRKCEVRLTPRETLAHGGRCPVCGESLTIGVEHRVEVLAD
                     RSEAQALPPPTAGMVSNFVPLPEILSELTASGAASRAVVRGYDQAIAKLGSELSILQS
                     VPVEDIARAGSPLLAEAITRLRAGQVICEAGYDGEYGVIRLFEDSELKQLTAGGLLFD
                     APISKRMRNEPPKPIVTHAPASDDRKTEPVRPRLRLVREAPSSLGSGVLAQLDDDQRP
                     AAQIVEGPLLIVAGPGSGKTRTLTYRIAHLIAERGVAA"
BASE COUNT          819 a         1346 c         1314 g          713 t
ORIGIN      
        1 ggcgccggga acgaacgtgg ctcatgaccg tgttcacacg cgcgcttcgg caagactcgg
       61 cgcgatcgac acgaacgtgg ttttgcgcag gtagtaccac cacgtagccg cgatgcaggt
      121 cacgtagaaa ccaaggaaaa ccgccaaagc caggtgcggg ctcccggtcg cggcaatgga
      181 ggcgccaaag ccgcgcggga tcaaatagcc cccgcaggcg ccaactgcgc caataaatcc
      241 cagcgcggcg gcgctctcga gaccggccgc ccgcaacgcg gcagcccgag ccacttcacc
      301 taggctcttc gtctccctgc gcttctcctc gcggaagatc gccgggatca ttcggtaggt
      361 cgagccgttg ccgacccccg tcgtgacgaa gaggatcaga aacatcgtca aaaacccggc
      421 aaaattcttg acgtcgacga agtacatgac gccgatcgtc gcggcgccca tgacgatgaa
      481 gttccagaac gtcacgatcg cgccgccgat tttgtcggcg agcaatccgc cgagcggacg
      541 cgaaagcgaa ccgaccagcg gccccaggaa ggcaatggcg accgtgaccc ctgggaattg
      601 ggtttttatc agcagcggaa acgccgcgga gtagccgata aacgagccga acgttccgat
      661 atagatgtac gacatcaccc aggtgtgctt gcgcttgacg atgacgactt ggtccttgaa
      721 cgtcgagcgc gccgaggtga gattgttcat gaacaggaac gcgccgatca ccgcgatgat
      781 cagtggcaac agccacatca gcccggcgtt ctgaagataa agaccttcgg cgaccggagt
      841 cgcctggtaa agactgataa agccgaatcc caacagcaac ggcgtcagca gctgcacgcc
      901 gctcactccg atgtttccgc cggctgcatt caagccgagc gcccagccct tcatgcggtc
      961 gggatagaag aaggaaatgt tggccatgct cgaggcaaag ttgccgcctc ccaggcccgc
     1021 cgttgccgcg accagcagca tcagccagaa cggcgtgtca ggctgggtga cgaagtacgc
     1081 gagcgccagc gtcggaatga acagcaccgc cgcgctgaaa accgtccaat ttcggccgcc
     1141 gaacgtcgtg accgcaaacg tatacggaaa ccgcatgagc gagccgatca gtccgggtag
     1201 cgcgacgagc tgaaacagct gatctgtcgt gtaatgaaag ccggcctgcg gcaacttggt
     1261 tgcgacgatg ctccagatga gccagatcga aaagccgaga tgctcggcaa aaatcgacca
     1321 gatgagatta cgttgcgcga tggatctacc cgtggatttc cagaacgtct catcctccgg
     1381 attccaatcc gcaatccagg tcgaagtccg cttcctcatc agtctgttcc tttttgggtg
     1441 gcgatggagg tgctgggagg gcaattccgc tgctgggggc gaacggagag aaaaaaacgc
     1501 caccgcccgg cgctcgaaag cgaccttcca gggcggcggc gttgccggtt gtgtctatgc
     1561 caaaactgcg acgccgccag cgttggcggc gcctggcgtt gcgctttaca agcttcgtgc
     1621 caagccggaa atggctgagg aaaatgtcag gaaatcaata ggatgagcca accgaatggg
     1681 tctagaacgg ctatggcgaa cgccggtctg ccctcccata ggcatgttgc aaaaaaatcg
     1741 tgcagcgtaa gattcgatca tttcagcatg cccgcggcgg tgaccacgga ctgggcgact
     1801 tcggcgatct tcttgttctc gttcatcgcc gtcttgcgca gcaagccata ggctgcgtcc
     1861 tcggtcaggt tcttcgccgt catgagaatc cctttggcgc ggtcgatcac cttacgctcc
     1921 tcgagcgcgc cacgcgcgcg ctccagctcc tcccgcaagc gggcgacgaa gttgaagcgc
     1981 gagacgcaca gatcgaggat gttggcgatg cgctccttgc ggagcgcccc gacgacatag
     2041 gcggaaacgc cggcatcgac ggcggcctcg gtcgccgcct tgtcgctctc gtcgacgaac
     2101 atggcgacgg gccgcttcac cgcccggctc acctcgaaca tctgctcgag cacggcgcgg
     2161 cgcggcgtct cgagatcgat gacgacgacg tcgggatcaa gtgcgcagat gcgagcgagg
     2221 agttgcgacg tttcatcaag gcgcacgata tgggcgtggc ccgcctcgcg cagggcgtct
     2281 tccaggaccg ccgcccggat gggattctcg tcgacgatga cgatcttgag ggaggcttgc
     2341 atggcgcaaa gggcaatttt caagcctcgt gccaaagccg cgccggatcc gaattcctga
     2401 gttgcatcag tttgttgcag gtgccgatcc cgctggcacc cgcgaacccg tggcgcaatc
     2461 ttgggcaatc gcgcccaccg agcatgcagc cggacggcgc accttgatgt ccacagggat
     2521 gctttccgcg cgcaggcgaa tcgcgccctt attggcgcgc cgattgtccc ggacgccctg
     2581 ctggcgcgtc ggcgcggcga agaaggcgcg gcccgcatgc gcttccacgc ggatctgcat
     2641 gtccactcga aatattcgcg cgcgacgagc cgggatctcg acctcgaaca cctcgccgct
     2701 cgggcatgcc gcaagggcat cggcgttgtg gcgaccggcg acttcaccca tccggcctgg
     2761 tccgccgagc tcaagcagaa gctcgtgccg gcggagccgg gcctctaccg attgcgcgac
     2821 gacatcgagc aggcgatctc gcaaacgctg ccggcggctt gccgcgcgcc ggtgcgtttc
     2881 atgctcgagg tcgaaatctc caccatctac aagaaggccg accgcacccg caaaatccat
     2941 cacctgatct acgcgccgga tttcgagacg gtcgatcgca tgtcggcacg gctcgcccgc
     3001 atcggcaaca tcgcgtccga cggacggccg attctcgggc tcgattcccg cgatctcctc
     3061 gagatcgcgc tcgagtccgg tccgcacgcc tatctcgtgc cggcgcatat ctggacaccg
     3121 tggttcgcgg cgctagggtc gcagtcgggg ttcgactcca taaccgaatg ctacggcgat
     3181 ctcgccgatc ggattttcgc ggtggaaacc gggctgtcgt ccgatccgcc tatgaactgg
     3241 cgggtgtcgt tcctcgaccg ctatcgcctc acctcaaatt cggacgccca ttcgcccggc
     3301 aagctcgggc gggaggcgac caccttcgac tgcgagcgcg actacttcgc catcaagcat
     3361 gcattggaga ccggtcacgg ctatgtcggc acggtcgagt tctttcccga cgaaggaaaa
     3421 taccatctcg acggccatcg caaatgcgag gtgcggctca ccccaaggga aacgctggcg
     3481 catggcggac gttgcccggt ctgcggggag tcgctgacga tcggcgtcga gcaccgggtc
     3541 gaggtgctcg ctgaccgcag cgaggcgcag gcgctgccgc cgccgaccgc cggcatggtg
     3601 tcgaacttcg tgccgctgcc ggagattctt tccgagctca ccgccagcgg agcggcatcg
     3661 cgcgcggtgg tgcgcggtta cgatcaggcg atcgccaagc tcggctcgga gctttccatc
     3721 ctgcaatcgg tgccggtcga ggacatcgct cgtgccggtt ctccgctgct cgcggaggcg
     3781 atcacgcgcc tgcgcgcggg acaggtgatc tgcgaggcag gctacgacgg cgaatatggc
     3841 gtcatccgcc tgttcgagga cagcgagctc aagcaattga ccgccggcgg attgctgttc
     3901 gacgcgccga tctcgaaacg aatgcgaaac gaaccgccga agccgatcgt gacacacgcg
     3961 ccggcatcgg atgaccgcaa gaccgagccg gtgcggccgc ggctgcgact ggttcgcgaa
     4021 gccccaagca gccttggctc gggcgtcctt gcgcagctcg acgacgatca gcgcccggcg
     4081 gcacagatcg tcgaggggcc gctcttgatc gtcgccggtc cgggctcggg caagactcgc
     4141 acgctgacgt atcgcatcgc gcatctgatc gccgagcgtg gcgtcgccgc cg
//
LOCUS       DATCWM010000157         4850 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_282088, whole genome shotgun sequence.
ACCESSION   DATCWM010000157 DATCWM010000000
VERSION     DATCWM010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4850)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4850)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4850
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_282088"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            152..607
                     /locus_tag="VIQ50_02925"
     CDS             152..607
                     /locus_tag="VIQ50_02925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEY9359359.1"
                     /translation="MAINFTVNGKAASSEGPPTTPLLWVIREDLKLTGTKFGCGTGLC
                     GACMVHIEGKRAFSCQTQISEVAGKSVTTIEGLSPDSSHPLQKAWLAEQVPQCGYCQS
                     GQIMSAADLLMQNPKPTRDQIIEHMNTNICRCGTYQRIVRAIERATREA"
     gene            611..2854
                     /locus_tag="VIQ50_02930"
     CDS             611..2854
                     /locus_tag="VIQ50_02930"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY9359360.1"
                     /translation="MTKQITVENLNARAARRRLLSRRQVMIGAAGLSFAVALGVDRYA
                     SGAVLGTERTGKGLSPWVNIAEDGTITIMSPATEMGQGSMTSLPLIIAEELDADWSKV
                     RVVPAPVIEAVYGNPGFGGMMYTAGSNAVTSYYRPLRIFGAQVRRVLIDNAAKKLGVP
                     AEELSTEPSVVVHAKSGRKLSYGEIAAFAEVPDKAPEVKADALKKPSEFRLIGKDVPR
                     VELPGKVNGSARYSIDVQVPNMLYGAVLRAPVEGSVPDKIDDAKAKVIAGPVQIVRLP
                     YGVGVLADTPWAAFEARRALARSVTWSRTGTAWGFDSDKGMERFAADAKDPTRGATEW
                     SRVGDARGELPKASSGFEAEYRCDYAYHAQMEPLNAIASVSPSGDAVEIWAGTQSQTT
                     ATEAPAKLLGIARDKVKLHDMLMGGGFGRRGNRDVDFIIDAVLLSKEAGRPVKVMWTR
                     EDDVENGRFRPISAHYLKAGFDPSGKLTAWHHRIAVDRVGPYMDPVRYQQTGGKDFIA
                     MLGGEPRGYDVPHQLVEQLYRDTGVRTNPLRGISFTANKFAAETFIDEIAVKHGIDPL
                     KFRLELLKKTPRAVTVVERVAEMANWSKKRDGRGLGIAFIDYSGSQVAGIAEISLDRA
                     SGQIKVHNFWCAIDCGVAVQPDNVVAQTESSIVYGLGMSLSERITIRNGVVEQSNFYD
                     YRVPRMNEVPAMHIEVIATDNHPTGVGQMATPLIAPAISSAVMQLTGVRLRHTPFTSE
                     RVKAALG"
     gene            3009..4412
                     /locus_tag="VIQ50_02935"
     CDS             3009..4412
                     /locus_tag="VIQ50_02935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359361.1"
                     /translation="MILTPSALAQSPKIGDPPEAKNMRLVGYSDLQGRSAYQPTIHQQ
                     GGRYIAYVGHHGGTPEVPQPINRLSGQAEYNGTSIVDVTDPREPKYLAHIPGLQGHYE
                     EGGAQMVRVCDGKTLPKGDPSKTYMLRVFGGLAHEIWDVTDPAKPALVTKVVEGLKDT
                     HKSWWECDTGIAYLVSGVQGWRVRRMTQVFDLSDPTKPVHIRDFGLVGQEPGATGTVP
                     TELHGPISTGPQGARVYFGYGTNKGGVLQIVDRDKLLNGPKEPTPENLRYPVVGQLNM
                     LPFNGAHTVFPMPKMPIAEFAEDKDGKVRDFVVIVDEQILNECQESRQLVFFVDVTIE
                     SRPMVVSNFFVPEASGNFCQRGGRFGAHSSNESTAPVFYKKVAFITYFNAGVRAIDVR
                     NPYQPREIGYFIPPITEATDKRCIKVDGIDRCKTAIQSNNVETDDRGYIYVVDRANTG
                     MHILELTGEARAVAGLP"
     gene            complement(4483..>4850)
                     /locus_tag="VIQ50_02940"
     CDS             complement(4483..>4850)
                     /locus_tag="VIQ50_02940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012248412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEY9359362.1"
                     /translation="WRMWVLCDREPVKQWSKGRVTLLGDAAHPMLQYLAQGACMATED
                     AVSLADKAAENPDDLPAAFRAYAEQRYLRTARVQIMARVYGEFYHARGPAAELRNQML
                     GSRTPEESYDGIAWLYGGM"
BASE COUNT          961 a         1489 c         1575 g          825 t
ORIGIN      
        1 cgtcgccaac gcctttgcca acgcgaccgg caagcgcatc cgcgacctgc cgctcaatcc
       61 ggcgcgggtc aaagcagcgt tgggctagct ggaaggccag cctaggaatg ggcgagttgc
      121 ccgctactcg cgacacggag ggagaaaaat catggccatc aacttcactg tgaacggcaa
      181 ggcggcctcg agtgaggggc cgccgacgac gccgctgttg tgggtgatcc gcgaggatct
      241 caagctgacc ggcaccaaat tcggctgcgg taccggtctg tgcggcgctt gcatggtgca
      301 tatcgagggc aagcgcgcgt tctcgtgcca gacgcaaatc tcggaggtgg ctggtaagtc
      361 ggtaaccacg atcgaagggc tgtcgccgga ttcgtcgcac ccgctgcaga aggcgtggct
      421 cgccgagcag gtgccgcaat gcggctattg ccaatccggg cagatcatga gcgcggccga
      481 cctgctcatg cagaacccca agccgacgcg cgatcaaatc atcgagcaca tgaacacgaa
      541 tatctgccgc tgtggaacct atcagcgcat cgtgcgcgcg atcgaacgcg cgacgcggga
      601 ggcctaagcc atgaccaaac aaatcaccgt cgagaactta aacgcgcgcg ccgcgcgccg
      661 ccggcttttg tcccgtcgac aagtcatgat cggagcggcg ggactgagct ttgccgttgc
      721 gcttggcgtc gatcgttatg cctcgggcgc ggtgcttggc actgagcgga ccggcaaggg
      781 actgagcccc tgggtcaaca tcgccgaaga tgggacgatc accatcatgt cgccggcgac
      841 cgaaatgggg caggggtcga tgacgtccct gccgctgatc atcgccgaag agctcgatgc
      901 cgactggtcg aaggtgcgcg tcgtgcccgc gccggtgatc gaggcggtct acggcaatcc
      961 cggtttcggc ggcatgatgt ataccgccgg gtcgaatgcg gtgacgagct attatcggcc
     1021 gttgcgcatc tttggcgcac aggtgcgccg cgtgctcatc gacaatgccg ccaagaagct
     1081 cggcgttccg gccgaagagc tcagcaccga gccgagcgtg gtggtgcacg ccaagtcggg
     1141 acgcaagctc agctatggcg agatcgccgc ttttgccgaa gtcccggaca aggcccccga
     1201 ggtcaaggcc gacgcgttga agaagccgag cgaattccgc ctcatcggca aggatgtgcc
     1261 ccgagtggaa ctgccaggca aggtcaatgg cagcgcgcgc tacagcatcg atgtgcaggt
     1321 gccgaacatg ctctacggcg cagtcctgcg cgcaccggtg gaaggatcgg tgccggacaa
     1381 gatcgacgac gccaaagcca aggtgatcgc cggtccggtc cagatcgtcc ggttgcctta
     1441 cggagtcggc gtgcttgcgg acaccccttg ggcggcattc gaggcgcgtc gggcgctcgc
     1501 ccgatccgtg acctggagca gaaccggaac cgcatggggc ttcgacagcg ataagggcat
     1561 ggagcgcttc gctgctgatg ccaaggaccc cacccgcggt gcaaccgaat ggagcagggt
     1621 cggcgatgca cgcggggagt taccgaaggc ttcttccggc ttcgaggccg agtaccgctg
     1681 cgactacgcc tatcacgcgc aaatggagcc attgaacgcc atcgcctcgg tgtcgccgtc
     1741 cggcgacgcg gtcgaaattt gggcaggaac gcagagccag actaccgcca ccgaagcgcc
     1801 tgccaagctc ctcggcattg cgcgcgacaa ggtaaagctc cacgacatgc tgatgggtgg
     1861 gggcttcggc cggcgcggca accgcgacgt cgatttcatc atcgacgcgg tgctgttgtc
     1921 gaaagaggcg gggcgaccgg tgaaagtcat gtggacgcgc gaggacgatg tcgagaacgg
     1981 gcgcttccgc ccgatctccg cacattatct gaaagccggc tttgatccgt caggaaagct
     2041 caccgcgtgg catcaccgca tcgccgtgga ccgcgtcggg ccctacatgg atccggtgcg
     2101 ttaccagcag accggcggca aggacttcat tgcgatgctc ggcggcgagc cgcggggtta
     2161 tgacgttccg caccaattgg tcgaacagct ctatcgcgac accggcgtgc gcacgaatcc
     2221 gctgcgcggg atcagcttca cggccaacaa gttcgcggcc gagaccttca tcgacgagat
     2281 cgcggtgaag cacggaatcg atccgctgaa attccggctc gagctgttga agaagacgcc
     2341 gcgcgccgtg acggtggtcg aacgggtggc ggagatggcg aactggagca agaagcgcga
     2401 cggccgcggc ctcggtatcg cattcatcga ttattcaggc tcgcaagtcg ccggcatcgc
     2461 cgaaatatcg ctcgaccgcg ccagcggtca gatcaaggtg cacaacttct ggtgcgccat
     2521 cgactgcggg gttgctgtgc agcccgataa cgtcgtggcc caaaccgaga gcagcatcgt
     2581 ctacgggttg gggatgtcgt tgagcgagcg catcaccatc aggaacggcg tggtcgagca
     2641 gtcgaacttt tacgactatc gcgtgccgcg catgaacgag gtgccggcga tgcacatcga
     2701 ggtgatcgcg accgacaacc atccgaccgg tgttggacaa atggcgacgc cgctgatcgc
     2761 acccgcgatt tcgagcgcgg ttatgcagct caccggcgtg cgcttgcgcc atacgccgtt
     2821 cacgtcggag cgggtcaagg cggcgctggg ctagccgccc acgcatgctc gcggcaagac
     2881 gcgctggtca ccagcgcgtc ttgcttgcta gagtccgcat cctgattggc atcagggaga
     2941 ccaagatgca acgacgtgcc ttgatccaac gctcgctcgg tatgatgaca ggcgcgctcg
     3001 ccggttggat gatcttgacg cctagcgcgc tcgcgcagtc gcccaagatc ggcgatcctc
     3061 cggaagctaa gaatatgcgg cttgtcggct acagcgattt gcagggccgc agcgcctacc
     3121 agccaacgat ccaccaacaa ggcggccgct acatcgcgta tgtcggccac cacggcggaa
     3181 cgccggaggt gccgcagccg atcaaccggc tgagcggaca agccgaatat aacggcactt
     3241 caatcgtcga cgtgaccgat ccgagagagc ctaaatacct cgcgcacatt cccggtctgc
     3301 aaggccacta cgaggagggt ggggcgcaga tggtgcgcgt gtgcgatggc aagacgctgc
     3361 ccaaggggga cccgagcaag acctatatgc tacgcgtctt cggcggcctc gcccacgaaa
     3421 tttgggacgt cacggatccg gccaagccgg cgctggtgac caaggtggtc gaaggactga
     3481 aggacacgca caagagctgg tgggaatgcg acaccggcat cgcttacctc gtgtccggtg
     3541 tgcaggggtg gcgggttcgg cgcatgaccc aggtcttcga cctcagcgat ccaacgaagc
     3601 cggtgcatat tcgcgacttc gggttggtcg gccaagaacc cggtgccacc ggcaccgtgc
     3661 cgaccgagtt gcatgggccg atctccactg gcccgcaggg cgcccgagtt tatttcggct
     3721 acggcacgaa caagggcggc gtgttgcaga tcgtcgatcg cgacaagctt ctcaacggcc
     3781 cgaaggaacc gaccccggag aatttgcgct atccagttgt gggtcagctc aacatgctgc
     3841 cgttcaacgg cgcccacacc gtcttcccga tgccgaaaat gccgattgcg gaattcgccg
     3901 aggacaagga cggcaaggtc cgcgacttcg tggtgatcgt ggatgaacag attctcaacg
     3961 aatgccagga atcgcgccag cttgtgttct tcgtcgacgt cacgatcgaa tcgaggccga
     4021 tggtcgtatc gaattttttc gtacccgaag cgagtgggaa tttctgccag cgcggtggac
     4081 gttttggcgc gcattcctcg aacgaaagca cggcgccggt gttctacaaa aaggtcgctt
     4141 tcatcactta ttttaatgcc ggcgtgcgcg cgatcgacgt gcgcaatccc tatcagccga
     4201 gggagatcgg gtatttcatt ccaccgatca ccgaagcgac cgacaagcgc tgcatcaaag
     4261 tcgatgggat cgaccgctgc aagaccgcga tccagagcaa caatgtggaa accgacgacc
     4321 gcggctacat ctacgtcgta gaccgcgcca ataccggcat gcatattctg gagctcaccg
     4381 gcgaagcgcg agcggtcgcg gggctgccgt agcggttgcc ctaggcggcg acgacgccga
     4441 gaccgcgatg cttctcagcg aaggctaacc cgccagctcg tgtcacattc cgccgtagag
     4501 ccaggcgatg ccgtcgtagg actcctccgg cgtgcgcgag ccgagcattt ggttgcgcag
     4561 ctcggctgcc gggccgcgcg cgtggtagaa ctcgccgtag acgcgcgcca tgatctgtac
     4621 gcgcgcggtg cgcaggtagc gttgctccgc gtaggcgcga aaggctgccg gcagatcgtc
     4681 ggggttctcg gcggctttgt cggcgagcga aaccgcatcc tcggtcgcca tgcaggcgcc
     4741 ttgcgccaaa tactgcagca tgggatgggc ggcatcgccg agaagcgtca cgcgtccttt
     4801 gctccattgc ttcaccggct cacggtcgca cagcacccac atgcgccacg
//
LOCUS       DATCWM010000158         6286 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_487179, whole genome shotgun sequence.
ACCESSION   DATCWM010000158 DATCWM010000000
VERSION     DATCWM010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6286
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_487179"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2273
                     /locus_tag="VIQ50_02945"
     CDS             <1..2273
                     /locus_tag="VIQ50_02945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HEY9359363.1"
                     /translation="VKNLLVGEDLTYERKIREMIVASRVEHTLSKAEILELYLNSVYL
                     GRGSWGIELAARSYFGKPAKELTMEEGALLAGLTKGPNYFNPDRHPTRAQERLAYVLS
                     RLQEDGAIAADQSGRGLPALPKLVAYERPRRDIGFHFVDQVAREAKSLAGIDAITSHS
                     YTVRSTINPQLQRAVEGALQEGLSRYERSAGRVQFRSAEANLGKAVQRTEAEKFGDKR
                     PAWQRALANARLPLYDVHWTPAIVLDKPSAKGGAWRVGLTDGRVLPLSVDNTAAQRKL
                     AVYDVVLVRLAESRGKGAARAELRVRPLVQGTVVVLENRTGRILALAGGFSYPLSQLN
                     RATQAVRQPGSAIKPLSYLAALQNGLQPNTLVSDDPITLPPLGGGRAREQDYWTPKNY
                     DGGYGGVLTLRRALENSRNLATVHLLDGGIESSPEASLDRLCKLALEAQVYRECLRYY
                     PFVLGAEPVRPIDLAAFYATIANEGLRPAPHVIDSIERNGTVIYRHDPKSSVMISSVD
                     HAAFYQLKTMLQGVLARGTARSISGLAPYVAGKTGTTDNENDAWFVGFTNDVTVAVWI
                     GYDNADGKRRTLGGGATGGHIAVPIFEPVIQAVWANVGSRAALAPPSPEAKRHLACKS
                     IDLESGEMQVSGGRAITECFRIDRNGHILDTQYQLVARGDAYGERGYYSVAPNPYGAQ
                     EQRGGYYYYDSNGRYVPAQRDPWRPQGQYYYGQYSPYGRDPRYQAQPPRDPYGREYQT
                     PQRIDPGYIWGNRPSY"
     gene            2281..3330
                     /locus_tag="VIQ50_02950"
     CDS             2281..3330
                     /locus_tag="VIQ50_02950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359364.1"
                     /translation="MIRTPKPYALLLGLVALAAASSARVQAQEFRIEEATSLAALAVE
                     GLKPKTIAFVDRPSDELIDPDVGLVRFEDWAQAKPLEKQFLTPFPSYLEPTVEVTVDG
                     VRKRFKEKLHMYVGEARFALARPPESIDLAIFVTLPFVERIDPAIKHNLITPAETIST
                     KDPRAAHNQHPLRRWCETRPVTICIHSRYQFEGKLPIGIQIANKLREGTKKIPDHLEF
                     ESELTFRPSAEVAEMGLGNLTGLDTPSVGALEQNIFYVNQVMQFGKLLAVFQAHPTDP
                     KQTVVTVFITLAVESNVLVKKKEFVKVPVLRNLVPAQVLAGKSSFNSGTSISAGLPIY
                     ARNQVKAIASILDRK"
     gene            3651..4955
                     /locus_tag="VIQ50_02955"
     CDS             3651..4955
                     /locus_tag="VIQ50_02955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9359365.1"
                     /translation="MEFRGRLGRRAETGFLSPAAAQQGAPVTRDAVVRASARGLDWFT
                     FFLADIQTGFGPFVAIYLTANAWTQFDIGLVLTAGGLVALACQMPGGALVDAMHSARL
                     VAVIAVGAICLSALALAIWPTFLVVMAARVLHAGASCVLGPVIAAISLGLVGHAALGT
                     RLGRNARFASIGNGFAAAAMGLCGYLISNQAVFLLTAVLAAPAIWALGRIRLDRIERP
                     HNTRGATAAVGVRQVLRERRLLIFAGCILLFQLANAAMLPLMGGILTLRANQWATTLI
                     GACIVVPQLVVAGFAPWIGRLADSWGRRPLLFLCFAALAARGVLFAFVTNPYLVVAVQ
                     VLDGVCAAILGVILPLVVADITRGTGRFNLGLGIVGSAVGIGAALSTSLAGYASDHFG
                     SSIAFFSLASVAGCGLALVWLLLPETLPDAKQPKAAPWAMPS"
     gene            5110..>6286
                     /locus_tag="VIQ50_02960"
     CDS             5110..>6286
                     /locus_tag="VIQ50_02960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007594035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9359366.1"
                     /translation="MQNACRYSDRPLAFLARYVRRRPLAHVAIFTAVVAAVSCSVGAQ
                     YGVKVLVDTLATGLTTHAKDAWLGFALLATLIAADNFLWRIACWIASYTFVAVTGDLR
                     RDLFRHLTGHAPSYFAERMPGTLTSRITATSNAVFTLQNMAMWNVMPPCMATLIAIAF
                     VVTVSVPMAAVLLGLAGILVLAMFRLAAAGRPLHHEFAKRAAAVDGEMVDVVGNMPLV
                     WSFCGLGREHSRLDDTIEREMTARRRSLLYLEKLRLFHAVVTVVLIIALLGWAIVLWE
                     NGAASAGDVVLVCTLGLSILHATRDLAVALVDVTQHLARLSEALATLLVPHHLRDHPQ
                     ATPLAGSGATVEFEHIDFCYPDGRRVFNDFSLWIEHGQRVGLVGQSGCGKSTLFLLLQ
                     "
BASE COUNT         1086 a         1978 c         1985 g         1237 t
ORIGIN      
        1 tcgtcaagaa cctgctggtg ggcgaagacc tgacctacga gcgcaagatt cgcgagatga
       61 tcgtggcatc gcgggtcgag catacgctga gcaaggcgga gatcctcgag ctttatctca
      121 attccgttta tctcggccgc ggttcgtggg gtatcgagct cgcagcgcgc agctatttcg
      181 gcaagccggc gaaggaactc acaatggagg agggcgcgct tcttgccgga ctaacgaagg
      241 ggccgaatta cttcaaccct gaccggcatc ccacccgtgc gcaggaacgg ctggcctacg
      301 ttcttagccg gctgcaggag gatggcgcga tcgctgctga tcagtccggg cgcggactac
      361 ccgcgctgcc gaagcttgtc gcctacgagc gcccgcgccg tgacatcggc tttcatttcg
      421 ttgatcaggt tgcgcgcgaa gcaaagtcgc ttgcgggcat cgacgcaatc acgtcgcact
      481 cctacacggt gcgctcgacc atcaatccgc aactgcagcg ggcggtggaa ggagccttgc
      541 aggagggact ttcccgctac gaacgcagcg ccgggcgcgt ccagttccgc tcggccgagg
      601 cgaatctcgg caaagccgtt cagcgcacgg aagcggagaa gttcggcgat aaacggccgg
      661 catggcagcg ggcgctggcc aatgcgcggc taccgctcta cgacgtgcac tggacgccgg
      721 cgatcgtgct ggacaagccg agcgcgaagg gaggagcttg gcgggtcggg ctgaccgacg
      781 gacgcgttct gcccctctcg gtcgacaaca cggctgctca acgcaagctc gcggtttacg
      841 atgtggtgct ggtgcgcctc gccgagagca gaggcaaggg cgccgcgcgt gccgagttgc
      901 gcgtgcgccc gctggtgcag ggaaccgtgg tcgttctgga gaaccgcacc ggccgcatcc
      961 ttgccctggc gggcggcttc tcgtatccgc tgagccagct caatcgcgcc acgcaggcgg
     1021 tgcgacagcc gggctccgcc atcaagccgc tgagttatct cgctgcgttg cagaacggcc
     1081 tgcaacccaa caccctcgtc agcgacgacc cgatcacgct tccaccgctc ggcggcgggc
     1141 gcgcccgcga acaggattac tggacaccga aaaactacga cggcggttac gggggtgtcc
     1201 tcacgttgcg ccgggcgctc gagaattcgc gcaatctcgc cacggtgcac ctgctggacg
     1261 gcgggatcga gagcagtccg gaagcaagcc tcgatcgcct gtgcaagctt gcactggaag
     1321 cgcaggtcta tcgcgaatgt ttgcggtact atccgttcgt gctcggtgcg gaaccggtgc
     1381 gaccgattga tctcgcggca ttctatgcaa ccatcgcgaa cgaaggcctg cgccctgcgc
     1441 cgcacgtgat cgattcgatt gagcgcaacg gtacggtgat ctatcgccac gatccgaaat
     1501 cgtcggtgat gatctcttcg gtcgaccatg ccgctttcta tcagctcaag actatgctgc
     1561 agggcgtgct ggcgcgtggc acggcgcgat cgatctccgg gcttgctccc tatgtggccg
     1621 gcaaaaccgg caccaccgac aatgaaaatg acgcctggtt cgttggcttc accaatgacg
     1681 tgaccgtcgc ggtctggatc ggctacgaca acgcggacgg caagcggcgc accctcggcg
     1741 gcggcgcgac cggcggtcac atcgcggtgc cgatcttcga gcccgtgatc caggctgtgt
     1801 gggcgaatgt cggttccaga gccgcgcttg ccccaccgtc gcccgaggcc aaacgccatc
     1861 tcgcatgcaa atcaattgat ctggagtccg gcgaaatgca ggtgagcggc ggacgcgcga
     1921 tcaccgaatg cttccgcatc gaccgcaacg gccacatcct cgatactcaa tatcagctgg
     1981 tcgcgcgcgg ggatgcatac ggggagcgcg gctactacag cgtggcgccc aatccctacg
     2041 gcgcgcaaga gcagcgtggc gggtactact attacgacag caacggccgc tatgttcccg
     2101 ctcagcggga tccgtggcgc ccgcaagggc aatactacta cggccaatac agtccttacg
     2161 ggcgggatcc tcgataccag gcgcagcccc cgcgcgatcc ctacgggcgc gaatatcaaa
     2221 caccgcagcg catcgatccc ggatatattt ggggcaatcg gccatcctat tgaagtaccc
     2281 atgattcgca ccccgaagcc ttacgccttg ctgctggggc tggtcgcact tgccgcggcg
     2341 tcgagcgctc gggtacaggc gcaagagttt cgcatcgaag aggcgacctc ccttgccgca
     2401 ctcgccgtcg aagggctcaa gccgaaaacc attgctttcg tcgatcgacc gagtgacgaa
     2461 ctgatcgatc ctgatgtcgg actcgtccgc tttgaggact gggcgcaggc gaaaccgctc
     2521 gaaaagcaat tcttgacgcc gtttccgagt tacctcgaac cgacggtgga ggtcaccgtc
     2581 gacggtgtgc gtaagcgatt caaggaaaag ctccacatgt acgtgggtga agctcgcttt
     2641 gcgctcgcgc ggccgcccga atcgatcgat ctggcaatct tcgtgacgct ccctttcgtg
     2701 gagcgcatcg atccggcgat taagcacaat ttgatcacgc cagccgagac aatctctacc
     2761 aaggacccgc gcgctgcgca caatcagcac ccgctgcggc gatggtgtga aacgaggccg
     2821 gtgacgatct gcatccactc gagataccag ttcgagggca aactgccgat cggcattcag
     2881 attgccaata agctcaggga agggacgaag aagatcccgg accatcttga attcgagagc
     2941 gaactcacgt ttcggccgtc cgcggaggtc gccgagatgg gtcttggaaa tctgaccggg
     3001 cttgatacgc cgtccgtcgg cgcgctggag cagaacatct tttacgtcaa ccaggtgatg
     3061 caattcggca aattgctcgc cgtgtttcag gctcatccca ccgaccccaa acagaccgtt
     3121 gtcaccgtgt tcataacgtt ggccgtggaa agcaacgtat tggtcaagaa gaaggaattc
     3181 gtgaaggttc cggtgctgcg caacctggtg cctgcccagg tgctcgccgg caaaagctcg
     3241 ttcaatagtg gcacctcgat cagcgcgggg ctgccgattt acgcacgcaa tcaagtcaag
     3301 gcgatcgcgt cgatcctcga tcgcaaatga gttagagtac ctgcaggttg atcttctggc
     3361 gaacgaccgc ccctcggacg cgaaagttcc acattgccct ggctgccgag gaaaatctcg
     3421 ccgtctcata ataccgattt gcgtggaact cacaggtggc ttctcaaaat tgccgccttt
     3481 gcgcactctg actcgcggta ggcacgactg cgacgtcccg cgtcaggctt gaggccggtg
     3541 tggggcgccg gaggagacga ggggtggccg attgcgcggg gcagtcggtc aaaaccgacg
     3601 ccgcgtaatt cccctgcggc gccggaggga ttgggctgtc agcgctagca ttggaatttc
     3661 gcggccggct tggccgccgc gccgagaccg gttttttgtc gccggcggcc gcccagcagg
     3721 gcgcgcccgt aacccgcgac gcggtggtgc gcgcgagcgc gcgcggcctc gactggttca
     3781 ccttctttct cgccgacatc caaaccggct ttggtccttt cgtggcgatc tatctgaccg
     3841 cgaacgcctg gacgcagttc gacatcgggc tggtgttgac cgcgggtgga ctggtggcgc
     3901 tcgcctgcca gatgcccgga ggcgcgctgg tcgacgcgat gcactcggcg cggctggtcg
     3961 cggtcatcgc ggtgggggcg atttgcttga gcgcgcttgc gctggcgatc tggcccacct
     4021 tcttggtggt catggcagcg cgcgtcctgc acgcgggggc gagttgcgtg ctcggcccag
     4081 tcatcgccgc aatcagcttg ggactcgtcg ggcacgccgc cctagggacg cggctcggcc
     4141 gcaacgcccg cttcgcctca atcggcaacg gatttgctgc tgcggcaatg ggactatgcg
     4201 gatacctgat ctccaatcag gcggtattct tgctcactgc ggtccttgcc gcaccggcga
     4261 tatgggcgct tggccgcatt cgcctggacc ggatcgaacg cccccacaac accaggggcg
     4321 caaccgcagc ggtcggcgta cgtcaagtgc tgcgcgagcg ccgactcttg atattcgccg
     4381 gctgtatttt gctgtttcag cttgccaacg cggcaatgct ccccctgatg ggcggcattc
     4441 tgacgctgcg cgcgaaccaa tgggctacga ctttgatcgg cgcctgcatc gtcgtgccgc
     4501 aactcgtcgt ggcgggattt gctccgtgga tcggtcggct ggccgattct tgggggcgac
     4561 gccccttgtt gttcctttgc tttgcagcct tggcggcacg cggggtgctg ttcgctttcg
     4621 tgaccaaccc ttatctggtc gtggccgtgc aagtcctgga tggcgtctgc gcggcgattc
     4681 tgggagtcat cctgccgctc gtggtcgccg acatcacccg cggcacggga cgcttcaacc
     4741 tgggactcgg cattgtcggc agcgcggtag gtattggagc ggcgctgagc acgagcctcg
     4801 ccggttacgc gagcgatcat ttcggcagca gcatcgcgtt tttcagcctt gcatccgtcg
     4861 ccggctgcgg cctggccttg gtctggctgc tgctgccgga gaccctgcct gacgcgaagc
     4921 aacccaaggc tgcgccttgg gcaatgccat catgatcggc ttcgcttcct aacctcgtcc
     4981 tccggtagct tcccaccatt gcgagcggcg tcaatcttgc ctggttcccg gggaacctca
     5041 gggtcggttc ttgcgttgca gaaactcggt agcgcgtgcg tcacgcttac tgggaaagtt
     5101 ccccccgcaa tgcaaaacgc ttgtcggtac agcgatcgtc cccttgcgtt tctcgcccgc
     5161 tacgtcagga ggcggccgct tgcgcatgtc gccatcttca ccgccgtcgt cgcagcggtt
     5221 tcttgctcgg tcggtgccca atatggcgtg aaggttctgg tcgacacgct cgctactggg
     5281 cttaccaccc atgccaaaga cgcgtggctc ggtttcgcgc ttctggcgac gttgattgcg
     5341 gccgacaact tcctgtggcg cattgcgtgc tggatcgcca gctatacctt cgtagcggtg
     5401 accggcgacc tgcgccgcga tctattccgg catttgaccg ggcatgcacc gagctacttt
     5461 gccgagcgca tgcctggcac gttgaccagc cgcatcactg cgacgtccaa cgccgtgttc
     5521 accttgcaga acatggcgat gtggaatgtc atgccgccct gcatggcgac gctgatagct
     5581 atcgctttcg tcgtgactgt gagcgtgccg atggcggccg tgttgctagg cctcgcgggt
     5641 attctagtcc tagcgatgtt ccgccttgcc gccgcgggcc ggccgctcca tcacgagttc
     5701 gccaagcgtg cggcggcggt cgatggcgaa atggtggatg tggtcggcaa tatgccgctc
     5761 gtttggtctt tctgcgggct cggccgcgaa cacagccgcc tcgatgacac tatcgagcgg
     5821 gaaatgacgg cgcgccggcg cagccttctc tacctggaga aactgcgcct gttccacgcc
     5881 gtcgtcaccg tcgtgttgat cattgcttta ttgggctggg ccatcgtgct ttgggagaac
     5941 ggagccgcga gcgcaggcga cgtcgtgctg gtgtgtacgc tcgggctgtc gatcctgcat
     6001 gcgacgcggg atctcgccgt cgcgttggtc gacgttacgc agcatctggc gcgcctctcg
     6061 gaagcgctgg caacccttct ggtgccgcat catctgcgcg accacccgca ggcgaccccg
     6121 ctggcgggat cgggcgccac cgtcgagttc gagcacatcg acttctgcta ccccgacgga
     6181 cgacgagtat tcaacgattt tagcctgtgg atcgaacacg gccagcgcgt cggcctggtg
     6241 gggcaatcgg gctgcggaaa atccacgctc ttcctattgc tgcagc
//
LOCUS       DATCWM010000159         3276 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_260535, whole genome shotgun sequence.
ACCESSION   DATCWM010000159 DATCWM010000000
VERSION     DATCWM010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3276)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3276)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3276
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_260535"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..831)
                     /locus_tag="VIQ50_02965"
     CDS             complement(<1..831)
                     /locus_tag="VIQ50_02965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEY9359367.1"
                     /translation="MKRAIFLFAAPVALGFCVGAASAQTLKTVKDRGALICGVSQGLP
                     GFSNPDDKGNWTGFDVDFCRAIAAAIFNDPSKVKFTPLSAKDRFEPLKTGDIDLLSRN
                     TTWTLSRDVAYGNFAGVTYYDGQGFMVRKSLKVNSALELNGASVCTQTGTTNELNLAD
                     YFRANNMKYEVIAFGTADETIKAYEAGRCDVFTTDVSQLFAEKLKLTNANDHVILPEI
                     ISKEPLGPLVRHGDDQWFDVVKWTLYTMLNAEELGVSSRNVDDAMKSNQPEIRRLLGV
                     E"
     gene            1105..2304
                     /gene="metC"
                     /locus_tag="VIQ50_02970"
     CDS             1105..2304
                     /gene="metC"
                     /locus_tag="VIQ50_02970"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004121 - cystathionine beta-lyase
                     activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HEY9359368.1"
                     /translation="MSKKTEADAKRPSLKPPTRLVTGGRDAVANHGFVNPPVYHASTV
                     LYPSAEDFLARRARYLYGRRGTPTSEALESALRELEGPDCAGVALLPSGLAAISTALL
                     AVLKAGDHLLVTDSAYQPTRRFCDSVLRRYGIETTYYDPLIGGGIAALMRSNTRAVFV
                     EAPGSLSFEIQDVPAIAAAAHAKGGLVLMDNTWATPLYFRAFDKGVDLSIQAATKYIG
                     GHSDVMLGTVSTNATAWERLSETVHTLGLCVGPDDIYLGLRGLRTLGVRLAQHHQAGL
                     RVARWLAARPEIAGVLHPALESCPGHAIWQRDFSGASGLFSIVFKPVAQSAVNAFVNA
                     LRLFGIGPSWGGFESLAIPFDCTSIRTATQWMPGGPTVRLHIGLEDVDDLIGDLECGF
                     AALAAAR"
     gene            complement(2335..>3276)
                     /locus_tag="VIQ50_02975"
     CDS             complement(2335..>3276)
                     /locus_tag="VIQ50_02975"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9359369.1"
                     /translation="RALLPHPARAQAKYPDRPIRLVIPFPPGGGYDAVGRPWAEKMKS
                     VLGTVVVENQGGGGSSLGAAAVARARPDGYTILLGGSSTHVTEALLKSRPLYDPLKEL
                     EPISNVVVSPLGLAINPAVPARTLREFIDYAKANPGKLSYGHAGVGSMNHLTGELLKS
                     LAGLPDLVHVPYRGSGPATADAISGQVAMATPAVTSALLELHRTGKLYILAVTSPARL
                     IAAPDIPTAVEAGLPGMISQQSIGLLAPAGTATSIVEQISRATRTALAEPTYRQMLIE
                     AGFEPDSDSTPEKFRRLLEEDIARWAPTVKAMGLKLD"
BASE COUNT          543 a         1048 c         1075 g          610 t
ORIGIN      
        1 ctccacgccc aaaagccgcc tgatctccgg ctggttcgac ttcatcgcgt cgtcgacgtt
       61 cctggaggat acaccgagct cctcggcatt gagcatcgta tagagcgtcc acttgacgac
      121 atcgaaccat tggtcgtcgc cgtggcgcac cagcggcccg agtggctctt tggagatgat
      181 ctccggcagg atcacgtgat cgttggcgtt ggtgagcttc agcttctccg caaagagctg
      241 cgagacgtcg gtagtgaaca cgtcgcacct gcctgcctca taggccttta tcgtctcgtc
      301 cgcggtgccg aacgcgatca cctcgtattt catgttgttg gcgcggaagt agtccgcgag
      361 gttgagctcg ttcgtggtgc cggtctgcgt gcacaccgac gcgccattga gctcgagcgc
      421 cgagttgacc ttgagcgact tgcgaaccat gaacccttgc ccgtcgtagt atgtcacgcc
      481 cgcgaagttg ccgtaggcga cgtcgcgcga cagcgtccag gtggtattgc gcgacaacag
      541 gtcgatatcg ccggtcttga gcggttcgaa ccgatccttg gccgagagcg gcgtgaactt
      601 gaccttgctt ggatcgttga agatcgccgc ggcaatcgcg cggcagaagt cgacatcgaa
      661 gccggtccag ttgcccttgt cgtcgggatt ggagaatccc ggcagtccct gactgacgcc
      721 gcagatgagt gccccgcgat ccttcaccgt cttgagcgtc tgggcggacg cggccccgac
      781 gcagaagccg agcgcgaccg gcgccgcgaa aagaaagatt gcacgtttca tgaagcagcc
      841 tttcctaaga gactgtcctt ggggccttga ttacaagtta cgtgatttga gcggcttttt
      901 ttacgccatg atcgagcgtg tggacgtgcc ggccagcgtc gcgtgcccgc atacgcgtat
      961 tcgcgttggt ctatccgcca tctcagaacg atcagctatg gcggtcaagg ggttgacggt
     1021 cgcggcactt gacgccatga ccgcgtgttg agcgcccccc gcgcgaaaag ataaggcgca
     1081 agcgggcgcc gcgagaaagg caccatgagc aagaagaccg aagccgacgc caagcgccca
     1141 tcattgaaac cgccgacgcg gctcgtgacg ggtggccgcg acgccgtcgc caatcatggt
     1201 ttcgtcaatc cgccggtcta tcacgcctcg acggtgttgt atccgagcgc cgaggatttc
     1261 ctagcccgcc gggcgcgtta cctctacgga cggcggggca cgccaacgtc ggaggcgctg
     1321 gaaagcgcgc tgcgcgagct cgaaggcccc gactgcgccg gcgtggcgct cctgccgtcg
     1381 ggtctcgcgg cgatttcgac cgccctgctc gcggtgctca aagccggcga ccacctcttg
     1441 gtcaccgaca gcgcctatca gcccacgcgc aggttctgcg acagcgtgct tcggcgctac
     1501 ggcatcgaga cgacatatta cgatcccctg atcggcggcg ggatcgccgc gctgatgcgg
     1561 tccaacacac gagccgtgtt cgttgaagcg ccgggctcgc tctccttcga gatccaagat
     1621 gtgccggcga tcgccgcggc ggcccatgcc aagggcgggc tcgtgttgat ggacaatacc
     1681 tgggcgaccc cgctctattt ccgcgcgttc gacaagggag tcgacctgtc gatccaggcc
     1741 gccaccaaat atatcggcgg ccattccgat gtgatgctcg gcacggtgtc gacaaacgcg
     1801 acggcgtggg aacggctgag cgagacggtg catacgcttg gcctttgcgt cgggccggac
     1861 gacatctatc tcggcctgcg cgggctgcgc accctcggcg tgcggctcgc gcagcaccat
     1921 caagcgggat tgcgggtcgc acgttggctc gccgcgcgcc ccgagatcgc cggcgtgctg
     1981 catccggcgc tcgagagctg tccgggccat gccatctggc agcgcgattt ttccggcgcg
     2041 agcggcctct tcagcatcgt gttcaagccg gtcgcgcaga gcgcggtcaa cgcgttcgtc
     2101 aacgcgctgc gtctcttcgg catcggcccg tcgtggggcg gcttcgagag cttggccatt
     2161 ccattcgact gcaccagcat ccgcacagcg acgcagtgga tgccgggcgg gccgaccgtg
     2221 cggctgcata tcggcctcga ggacgtcgat gacctgatcg gcgatctcga atgcggcttt
     2281 gccgcccttg cagcggcgcg ctgaggcgtg cttgctcagg agtggcgccg cggttcagtc
     2341 gagcttcaag cccatcgcct tgaccgtcgg tgcccaccgg gcgatgtcct cttcgagcaa
     2401 ccgccggaat ttctccgggg ttgaatcgct gtcgggttcg aagcccgcct cgatgagcat
     2461 ctgccggtag gttggctccg ccagcgccgt gcgcgtcgcc cgcgaaatct gctcgacaat
     2521 gctcgtcgct gtcccggcgg gagcgagcag cccaatcgac tgctgcgaga tcattccggg
     2581 aagtcccgct tcgacggccg tcgggatgtc cggcgcagcg atcagacggg cgggactggt
     2641 cacagcgaga atgtacagct tgccggtccg gtgaagttcg agcagcgcgc tggtgaccgc
     2701 gggggtggcc atcgccacct gtccgctgat ggcgtcggcg gtcgccggtc ccgatccccg
     2761 gtagggcaca tgcaccaggt ccggcagtcc cgcgagcgat ttgagcagct ctccggtcag
     2821 gtggttcatc gagccgacgc cggcatgccc ataggacagc ttgccgggat tggccttggc
     2881 gtagtcgatg aactctctca gcgtccgagc cggtaccgcg ggattgatcg cgaggcccaa
     2941 gggcgagacc accacgttgg agatgggctc gagttctttg agtggatcgt agagcggacg
     3001 gctcttgagc agggcttcgg tgacatgagt gctcgagccg ccgagcaaaa tagtgtagcc
     3061 gtccgggcga gcacgggcga ccgcggctgc accgagcgaa ctgccgcctc ccccttggtt
     3121 ctccacgact acggtgccaa gcacggactt catcttctcc gcccatggac gccccacggc
     3181 gtcgtaaccg ccgcccggcg gaaatggaat gaccagccgg atcggacggt cgggatattt
     3241 ggcctgggcg cgcgccggat ggggcagcag cgcgcg
//
LOCUS       DATCWM010000160         2837 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_55267, whole genome shotgun sequence.
ACCESSION   DATCWM010000160 DATCWM010000000
VERSION     DATCWM010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2837)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2837)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2837
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55267"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            23..343
                     /locus_tag="VIQ50_02980"
     CDS             23..343
                     /locus_tag="VIQ50_02980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system Fe-S cluster assembly protein"
                     /protein_id="HEY9359370.1"
                     /translation="MPEGELARLTDDVIAALKTVYDPEIPSDIYELGLVYKIDIADDR
                     AVTVEMTLTTPNCPSAQELPTMVENAVASVPGVGEVKVNIVWDPPWDPSRMSEEARAI
                     LNMW"
     gene            347..757
                     /locus_tag="VIQ50_02985"
     CDS             347..757
                     /locus_tag="VIQ50_02985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY9359371.1"
                     /translation="MKLDRVIETCLYVDDLDRAARFYEQVLGLAVLTSDARFRAYDVG
                     GQSVLLLFHRGSTLETVRMPGGTIPPHDGHGPLHMAFAVGVDALPQWEQRLAEQGIAI
                     EGRTTWSRGGHSIYFRDPDGHLLELATPGLWAIY"
     gene            919..1908
                     /locus_tag="VIQ50_02990"
     CDS             919..1908
                     /locus_tag="VIQ50_02990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9359372.1"
                     /translation="MTIRKAIVFAVGALALAIVGASPATAQAFPSRPVTIIVPFAAGG
                     TTDVIARIVGEHMSRTLGQQFIVENVVGAGGTTGSIRAMRASPDGYTIELANMGTHAA
                     AVALYPSLAYNPEVDFTPIGMVAGLPVVIVGKKELPPNDLKEFAGYVKANAENLNMAH
                     AGVGSITHFTCLLLNSILGVKPTLVPFNGAAPAITALIAGQVDYMCNVTPDVVQPVRS
                     GAFKAYAIGTSRRSAALPEVPTSAEAGLAQFQASAWNAFFAPKGTPKPILDKLSEALE
                     KAMDDERTQKRLLELGSEIPDKTRRGQQPLAALVKDEIARWTPIIKAAAVKSE"
     gene            1979..>2837
                     /locus_tag="VIQ50_02995"
     CDS             1979..>2837
                     /locus_tag="VIQ50_02995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011502323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEY9359373.1"
                     /translation="MSEPVARRALAEIWRTAGHCEAALEAIDLTGAEPVLPSSFPVGS
                     AAQATIAATALAAGELWRLRTGRRQHVSVDMRSAAIEFRSERYLRVDGSPPVEHHDEI
                     AGLYRCGDGRWVRLHTNLPHHRDGTLALLGCRHERAAVQRALDGWRAEALETAAAEAG
                     LVVTACRTFAEWDGLPQGRAIAGLPLFTLDQIGEAPARALPAAERPLAGVKVLDLTRI
                     IAGPVCGRTLAAHGADVFVQGYRPGAIAAFGFGPQDVARIRPGIIYVSLCAYGQEGPW
                     AGRRGFDSLV"
BASE COUNT          480 a          915 c          950 g          492 t
ORIGIN      
        1 cgacgccgcg gcgccctcgg cgctgccgga gggcgaattg gcgcggctca ccgacgacgt
       61 cattgccgcg ctcaagaccg tttatgatcc ggaaattccc tccgatatct acgagctcgg
      121 tctcgtctac aagatcgaca ttgccgacga ccgggcggtc accgtcgaga tgacgctcac
      181 cacgcccaac tgtccctcgg cgcaggaact gccgaccatg gtggagaacg ccgtggcgag
      241 cgtgcccggc gtgggcgagg tcaaggtcaa catcgtctgg gatccgccct gggatccgag
      301 ccgcatgtcg gaggaagcgc gggccattct taatatgtgg tgaggcgtga agctcgaccg
      361 cgtgatcgag acctgtctct acgtcgatga cctcgaccgc gcggcgcgct tctacgagca
      421 ggtgttgggg ctcgctgtac tgaccagcga cgcgcggttt cgcgcctatg atgtcggcgg
      481 tcaaagcgtg ttgctgctgt ttcaccgcgg ctcgacgctt gagacggtgc gcatgccggg
      541 cggcacgatc ccgccgcacg acgggcatgg accgctgcac atggcctttg ccgttggcgt
      601 cgatgcgtta ccgcaatggg agcagcggct cgccgagcag ggaatcgcca ttgagggccg
      661 caccacctgg tcgcgcggcg gccacagcat ctacttccgc gatcccgatg gacacctcct
      721 cgagctggca acgcctgggc tatgggcgat ctattaggcc tgcggccgag cggatatctt
      781 ccggtttgcc ccgtcaaagc cgacgcgatg taatggggca gggacatcag ttcactgcat
      841 ctaagccagt ggggttccga gccgtgactc ggtcttcgca agaacaatac cgccggaagg
      901 acgcagggag gaaaatccat gacgatcaga aaggcgattg tcttcgcggt cggcgcgctc
      961 gccttggcaa tcgtcggtgc gagcccggca acggcccagg cctttccgtc gcggcctgtc
     1021 acgatcatcg tgcccttcgc cgcgggcggg accaccgacg tcattgcgcg cattgtcggc
     1081 gagcacatgt cgcgcacgct cggccagcag ttcatcgtcg agaacgtggt gggtgcgggc
     1141 ggcaccaccg gctcgatccg tgcgatgcgc gcaagccccg atggctacac cattgaattg
     1201 gcaaacatgg gaacgcatgc ggctgcggtg gcgctctacc ccagcctcgc ctacaacccg
     1261 gaagttgatt tcacgccgat cggcatggtc gccggccttc cggtcgtgat tgtgggaaaa
     1321 aaggagcttc cgcccaacga cctcaaggaa ttcgcaggct atgtgaaggc gaacgccgag
     1381 aacttgaaca tggcgcatgc gggtgtcggc tcgatcacgc atttcacctg cctgctgctc
     1441 aattcgatac tcggggtcaa gccgacgctg gtcccgttca acggcgccgc tcctgccatc
     1501 accgcattga tcgccggcca agtcgattac atgtgcaacg tcacccccga cgtcgtgcag
     1561 ccggttcgca gcggggcgtt caaagcctat gcaatcggaa cttcgcggcg cagcgcggcg
     1621 ctgcctgagg tgccaacgtc ggcggaggcc ggccttgcgc aattccaggc gtcggcctgg
     1681 aacgcctttt tcgcacccaa gggcacgccg aagccgatcc tcgacaagct cagcgaggcg
     1741 cttgagaagg cgatggatga cgagaggacg cagaaacgcc tgctcgagct cggcagcgaa
     1801 attcccgaca agacgaggcg cggtcagcag ccgctcgccg cgctggtgaa ggacgagatc
     1861 gcgcgctgga ctccgattat caaggcggcg gcggtcaagt cggaatgagc agacgtgtgg
     1921 tccgcttgtt cggcgacgcg gacgaaatcc tcttccgccg tgtcagcgcg agttggaaat
     1981 gagcgaacca gttgcaagac gtgctctcgc cgagatatgg cgcaccgcag gacattgcga
     2041 agcggcactc gaggcgatcg atctcaccgg cgccgagccg gtgctgccgt cgtcatttcc
     2101 ggtcggtagc gcggcgcagg cgaccatcgc cgccacggcc ctggcggcgg gcgagctgtg
     2161 gagattgcgc acgggtcgtc gccagcacgt cagcgtcgac atgcgcagcg ccgcgatcga
     2221 gtttcgcagc gaacggtact tgcgtgtcga tgggagtccg ccggtcgagc atcatgacga
     2281 gatcgccgga ctgtatcgct gcggcgatgg ccggtgggtg cggctccata ccaatttgcc
     2341 ccatcaccgc gacggaacgc ttgccctgct cggctgccgg cacgagcgcg cggccgtgca
     2401 gcgcgcgctc gatggatggc gcgccgaggc gctggagacc gccgctgccg aggccggcct
     2461 tgtcgtgacc gcgtgccgca cgttcgccga gtgggatggc cttccgcagg gccgcgctat
     2521 cgccggcctt cccctcttca ccctcgatca gatcggcgag gcgccggcgc gggcgttgcc
     2581 tgcggccgaa cggcctttgg caggcgtcaa ggtgctcgac ctcacgcgca tcattgccgg
     2641 ccccgtatgc ggccgcacgc tcgccgcgca cggggccgac gtgtttgtgc aaggctaccg
     2701 accgggtgcg attgcggcgt tcgggttcgg acctcaggac gtcgcacgca tccggcccgg
     2761 gatcatctat gtctcgctct gcgcgtatgg ccaggagggc ccgtgggcag gtcggcgcgg
     2821 gttcgactcg ctggtac
//
LOCUS       DATCWM010000161         2404 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_157923, whole genome shotgun sequence.
ACCESSION   DATCWM010000161 DATCWM010000000
VERSION     DATCWM010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2404
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_157923"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1119)
                     /locus_tag="VIQ50_03000"
     CDS             complement(<1..1119)
                     /locus_tag="VIQ50_03000"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HEY9359374.1"
                     /translation="MQTVAQAAKRSAKTAPKPSRQDLRFWIDALRAAGELQEINGAER
                     EAEIGGIVDLYMRKMGNPAVLFDDIPGYPRGHRILANILTSVRRINLTIGMPIESSAI
                     ELVSYWRKYMKEARNITPIKVKSGPLMENVKSGKDVDIQSIPTPRWHEHDGGYYIGTG
                     CMVIMKDADTGWINYGAYRVQSHGSNVATVMCSKGKHGDLIKRRYHERGEPCPIAVVA
                     GMHPALFMVGGLEIPYGKNEYDVAGGLIGEPVEVIDAPVTGLPIPAHAEIAFEGFIHP
                     DDLLEEGPLGEWTGYYAGGKKKEPAIRIATFMHRNDPILLGAVPAVPPDDDSFYRGTY
                     RSGAVWNQLEAAGVPEVKGVWAHAAGGSRLWLTVAIKQQ"
     gene            complement(1149..>2404)
                     /locus_tag="VIQ50_03005"
     CDS             complement(1149..>2404)
                     /locus_tag="VIQ50_03005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009398977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY9359375.1"
                     /translation="GRYETTFVRERLIDAIATRLGIDPNEVRRRNAIATDEMPYHRPL
                     EALGEEIEYDSGDYVGLLDKLLAALDWDKRKAELARRRAAGEAVGAGFAMFVEKSGLG
                     PADGVRIEVDTSGMVELITGGASLGQGFETVMAQVCAEILGTDYRRVRVTHGQTDRIA
                     YGIGAHASRATVMTASATHNGAVKLRAKAIDAAAALMQARPDALEIVDGKVLRKAQPA
                     GPSISLGEIAEHLAPTSKTLGGREPGLSAEGWFRVKHQVYPYGIHFAVVKVDRATGGV
                     AVEDYVIAYDIGRAINPALVKGQIVGGFAQGLGGALLEEFTYNERGDPLATTFADYLM
                     PTTREIPEVQVILREDFTSPLNPLGIKGAGESGITGVGAAIASAIDNAIGMPGAVTQL
                     PVTPQRLKEILNRSVSSPSCSRAAS"
BASE COUNT          383 a          804 c          765 g          452 t
ORIGIN      
        1 ttgttgcttg atcgcgaccg tgagccagag ccggctgccg ccggcggcat gcgcccatac
       61 gcctttgact tccggcacgc ccgccgcttc aagctggttc cacacggcgc cggagcgata
      121 ggtgccgcgg tagaaagaat cgtcgtcggg cggcaccgcc ggcacggcgc ccagcaggat
      181 cgggtcgttg cggtgcatga acgtcgcgat gcggatcgcc ggctctttct tcttgccgcc
      241 ggcgtagtag ccggtccact cgccgagcgg accctcttca agtagatcgt cgggatggat
      301 gaagccctcg aaggcgatct ccgcgtgcgc cggtatgggc aggcccgtca ccggcgcatc
      361 gatcacctcg accggctcgc cgatcaagcc gccggcgacg tcgtattcgt tcttgccata
      421 cggaatctcg agccctccca ccatgaacag cgcggggtgc atgcccgcca ccacggcaat
      481 gggacacggc tcgccgcgct cgtggtatcg ccgtttgatc aggtcgccat gcttgccctt
      541 cgagcacatg accgtcgcca cgttcgaccc atgggattgc acgcgatagg cgccgtaatt
      601 gatccagccg gtgtcggcat ccttcatgat caccatgcag ccggtgccga tgtaatagcc
      661 gccgtcgtgc tcgtgccagc gcggcgtcgg gatgctctgg atgtcgacgt ccttgccgct
      721 cttgacgttc tccatcagcg gtccggattt gaccttgatc ggcgtgatgt tccgcgcctc
      781 cttcatatat ttgcgccagt aggagacgag ctcgatcgcg gagctctcga tcggcatgcc
      841 gatggtgagg ttgatccgcc gcaccgaggt gagaatgttg gcgaggatgc ggtggccgcg
      901 cggatagccg gggatgtcgt cgaacagcac cgcggggttg cccatcttgc gcatataaag
      961 gtcgacgatg ccgccgattt ccgcttcgcg ttcggcgcca ttgatctcct gcagctcgcc
     1021 cgccgcgcgc aacgcatcga tccagaagcg caagtcctgc cgcgatggct tgggcgcggt
     1081 cttggccgag cgcttggcgg cttgggcgac ggtctgcatg ggtggctcct cgctgccagc
     1141 tcgggaggtc agctcgcggc gcggctgcag gacggtgagc tgaccgatcg gttcaagatt
     1201 tctttcaggc gctgcggcgt cacgggcagc tgcgtcactg cccccggcat tccgatggcg
     1261 ttgtcgatcg cggatgcaat cgcggcgccg accccggtaa tgccgctctc gcccgctcct
     1321 ttgatgccca gcggattgag cgggcttgta aagtcctcgc gcaagatgac ctgaacctcg
     1381 gggatctcgc gcgtcgtcgg catgaggtaa tcggcaaacg tggtcgccag cggatcgccg
     1441 cgttcattat aggtgaattc ttccagcagc gctccaccca agccctgagc gaagccgccg
     1501 acgatctgcc ctttgaccag cgcagggttg atcgcacggc cgatatcgta ggcgatgaca
     1561 tagtcctcga cggcgacgcc gccggtcgcg cgatcgacct tcaccaccgc gaagtggatg
     1621 ccgtaggggt agacttggtg cttcacccgg aaccagcctt ccgcggacag gccgggctcg
     1681 cggccgccga gcgtcttcga ggtcggcgca agatgctcgg caatctcgcc gaggctgatc
     1741 gaagggccgg cgggctgcgc cttgcgcagc acctttccat cgacgatctc gagcgcatcc
     1801 ggccgcgcct gcatcagtgc ggcggcagcg tcgatcgctt tcgcacgcaa cttgaccgcg
     1861 ccgttgtgag tagcggaggc cgtcatcacg gtcgcgcgcg acgcgtgcgc tccgatgccg
     1921 taggcaatac gatcggtctg gccgtgggtc acgcgcacgc gccggtagtc ggtgcccaaa
     1981 atctccgcgc aaacctgggc catcaccgtc tcgaagccct ggccgagaga agcgccgccg
     2041 gtaatcagct cgaccatacc ggaagtgtcg acctcgatcc tcacgccgtc ggccggacct
     2101 aggccgctct tctcgacgaa catcgcaaac ccggcgccga ccgcttcgcc ggcggcgcgc
     2161 cggcgcgcca actccgcctt gcgcttgtcc cagtcgagcg cggctagtag cttgtcgagc
     2221 agcccgacat agtcgccgga atcgtattcg atctcctcgc ccaaggcctc gagcggccga
     2281 tgatagggca tctcatccgt cgcaatcgcg ttgcgccgtc gcacctcgtt tgggtcgatg
     2341 ccgagcctgg tagcaatagc gtcgatcagc cgctcgcgaa caaacgtcgt ctcataacgt
     2401 cccg
//
LOCUS       DATCWM010000162         3403 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_481840, whole genome shotgun sequence.
ACCESSION   DATCWM010000162 DATCWM010000000
VERSION     DATCWM010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3403
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_481840"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(527..1717)
                     /locus_tag="VIQ50_03010"
     CDS             complement(527..1717)
                     /locus_tag="VIQ50_03010"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HEY9359376.1"
                     /translation="MKIVKLEDFHADGGWDTYSFLKITTDEGITGWSEFNESRRKGMT
                     ALVHGLGETLIGEDPCAIARIDAALYARSRPTAGGLTSHAIAAIENACLDIRGKALGV
                     PVYELFGGAVRERLPVYWSRCGVLRARCAELFDGKVIDRPAVRSLDDLKDAAREARER
                     GFKALKTNVLLFDAKGGRQFAPGMIGAGAGHPELNLGDEVLAALIDQLTALREGAGKG
                     VRLLLDLNFNYKPEGLRRIAKAVEPFDLLWLEMDLFEPKALSLIRQSTTTPIGSLETI
                     LGRRNLKPYLENYAVDVAIIDAQWNGLVEATRMAAMADAYEVNVASHNFNGPLANVMS
                     AHFCAAIPNFRIMEFDIDEVPWKAKLLTKPYVIENGEFLLPTGAGWGTAVNEAVIRAH
                     PPKM"
     gene            1821..2882
                     /locus_tag="VIQ50_03015"
     CDS             1821..2882
                     /locus_tag="VIQ50_03015"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEY9359377.1"
                     /translation="MRYLRHFSRASAAGIVALLMFVACAPAQPSSVADLAGYQGADRE
                     QLLIDGAKREKELTFYSSIPPDDISALVSAFDRQYGVKVKVWRADSEGFLQRVVREAR
                     ARRFEVDVVAGSSSALEPLYRENLLQEVKSPYLSGIIPEAIAPHGQWVAVYLSTIVQA
                     YNTELVREDSLPKTYYDLLRPQWKDKLGIEAEDFDWFAQVVMEMGEAQGLRLFRDIVA
                     SNGISVRKGHSLLTNLVAAGEVPLALTAYGFLAEQAKRKGAPLDWFVIPPVIARPTAE
                     GLARNAPHPHAAVLFFDFLISEEGQQILASRQFVTVSRSIETLFSKGPIRLIDSAAIL
                     NEARKWQELYQKTIIAPSR"
     gene            2901..>3403
                     /locus_tag="VIQ50_03020"
     CDS             2901..>3403
                     /locus_tag="VIQ50_03020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007759303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9359378.1"
                     /translation="MRYIDAFNHFFPKRIYELMLQSPAGQKDLGKRMQGIPALYDVEE
                     RLRVVDSFPDYTQVICLGMPAIDRLTGPDHSAEWARIGNDGLAELVAKYPDRFVGYAA
                     SLPMNAPEAAAKEAERVLSNGANAIQLHTNVDGAPIDQDQFLPIYEIIERSGKPILLH
                     PIRTREMA"
BASE COUNT          603 a         1123 c         1089 g          588 t
ORIGIN      
        1 cccgccgcgg ccggagcgcg gaagccaagc gccaccggcc gcgcagagga cttggagtct
       61 cctcccgaga atgcgagcca aaccgaaatg cggtgcgcat ccgcgtatcc actagcgcgg
      121 ggatggcgga tctacccatc cgcggcggcg cggctggtcg agccggaaaa tttcagagcc
      181 cgcggaaggc accgcagtct tcgggccagg cgttgcggtg ctcgcgctga agccgtcggt
      241 ctcgccgcga ccgagactgt cgccccggcg gctcctagag gaacctccat cgtgacggtg
      301 acgccatcgg acgctctcgg tcccgccgtt tgcgtgcaga accgcggccg agggcggcgc
      361 gaggagcggt gacgccgtgg cgtccgccgc gccgctgagg aaaatggctg cagcaaaagc
      421 aacttcgcgt gcccgcatgg gggcccctcg ctggcgccga cacatgcaag aacgccaatg
      481 gccccagtat gttccgcgcc gggcgtcggt cgcgccggcc ccgctctcac atcttgggcg
      541 gatgcgcgcg gatgaccgct tcgttgacgg ccgtgcccca gcccgcgccc gtgggaagga
      601 gaaactcgcc gttctcgatc acgtatggct tggtgaggag ctttgccttc cacggcacct
      661 cgtcgatgtc gaattccatg atgcggaagt tgggaatcgc cgcacagaaa tgcgcgctca
      721 tgacattggc cagcggaccg ttgaaattgt gcgacgcgac gttgacttcg taggcgtcgg
      781 ccatggccgc catcctcgtc gcctccacga gcccgttcca ttgcgcgtcg atgatggcaa
      841 cgtcgaccgc atagttttcg aggtaaggct tgagattgcg ccggccgaga atcgtctcca
      901 gcgagccgat gggcgtggtg gtcgactgcc ggatcagact cagcgccttg ggctcgaaga
      961 gatccatttc cagccacagc agatcgaacg gctcgaccgc cttggcgatg cgccgcagcc
     1021 cctcgggctt gtagttgaag ttgaggtcga gcaatagccg cacgcccttt ccagcgcctt
     1081 cgcgcaaagc cgtgagctgg tcgatcaatg cggctagcac ctcatcgccg agattgagct
     1141 cgggatgtcc cgcgccggcg ccgatcatgc cgggagcgaa ctgccgcccg cctttggcgt
     1201 cgaacagcag cacgttggtt ttcagcgcct taaagccgcg ctcgcgcgcc tcgcgcgcgg
     1261 cgtccttgag atcgtcgagg ctgcgcaccg ccggccgatc gatcaccttg ccgtcgaaaa
     1321 gctcggcaca gcgggcgcgc aggacgccgc agcgcgacca atagaccggc aggcgctcgc
     1381 gcacggcccc gccaaaaagc tcgtagacgg gaacgccgag cgccttgcca cggatgtcga
     1441 gacaggcatt ctcgatggcg gcgatggcgt gggacgtaag cccgcccgcg gtcggacggg
     1501 agcgggcgta gagcgcggcg tcgatgcggg cgatcgcgca tgggtcctct ccgatgagcg
     1561 tctcgcccag tccgtggacc agcgcggtca tccccttgcg acggctctcg ttgaactcgg
     1621 accagccggt gatgccttcg tcggtggtga tcttcaggaa ggaataggtg tcccagccgc
     1681 cgtcggcatg gaagtcctcg agcttgacga tcttcattcg ctgtctcgct tggcggttgc
     1741 acgcttgcga cgctgacaag gcgcacaaaa ttgtgccatg ctttgcgagc gacaccaacc
     1801 gcggcacgga gctcggtcgc atgcgatatc tccggcactt ttcgcgtgca agcgcggccg
     1861 ggattgtggc gctgttgatg ttcgtcgctt gcgcgcccgc ccagccgagc agcgtcgccg
     1921 acctcgccgg ctaccagggc gccgaccgcg agcagctgtt gatcgacggc gccaagcggg
     1981 agaaggagct taccttctac tcatccatac cgccggatga catttctgcg ctcgtctccg
     2041 ccttcgacag gcaatacggc gtcaaggtca aggtctggcg cgcggattcg gaaggcttcc
     2101 tgcaacgcgt ggtgcgcgag gccagggctc ggcgtttcga ggtcgacgtc gtggcgggct
     2161 cgagctcggc gctcgagccg ctttaccgcg agaacctcct gcaggaggtc aagtcgccat
     2221 acctctccgg catcattccc gaggccattg ctccgcacgg gcagtgggtg gccgtctatc
     2281 tcagcaccat cgtccaggcc tacaacaccg agctcgtgcg cgaggacagc cttcccaaga
     2341 cctattacga tctgctccgc ccgcaatgga aagacaagct cggcatcgaa gcggaggatt
     2401 tcgactggtt cgcgcaagtc gtcatggaga tgggcgaggc gcaaggcttg cggctgttcc
     2461 gcgacatcgt ggcctcgaac ggaatttccg tgcgcaaggg ccacagcctc ctcaccaacc
     2521 tcgtggccgc cggtgaggtg ccgctggcgc tcacggccta cggctttctg gccgagcagg
     2581 ccaagcgcaa gggcgcgccg ctcgattggt tcgtgattcc gccggtgatc gcccgcccca
     2641 cggccgaagg gctcgcgcga aacgcgccgc atccgcatgc ggcggtgctg ttcttcgatt
     2701 ttctgatcag cgaggaaggt cagcagatcc tggcgagccg gcagttcgtc accgtgagcc
     2761 gaagcatcga gacgcttttc agtaaaggcc caatcaggct catcgactcg gccgcgatcc
     2821 tcaacgaggc gcgtaagtgg caggagcttt accaaaagac cataattgcc ccgtcacgat
     2881 gatccggacg gcgagcatcc atgcgctaca tcgatgcatt caaccatttc tttcccaagc
     2941 gcatctacga attgatgctg caatcgcccg caggacagaa ggatctcggg aaacggatgc
     3001 agggaatccc cgcgctgtac gatgtcgaag agcggctacg cgtcgtcgat tccttccccg
     3061 attacaccca ggtcatctgt ctcggcatgc cggcgatcga ccggctcacc gggcccgacc
     3121 actcggccga atgggcgcgg atcggcaatg acgggcttgc cgagctggtc gccaaatatc
     3181 ccgaccgctt cgtcggctac gccgcctcgt tgcccatgaa cgcacccgag gccgcggcga
     3241 aggaggccga gcgcgtattg tcgaacggcg ctaacgcgat ccagctgcac accaacgtcg
     3301 acggcgcccc gatcgaccag gaccagttcc tcccgatcta cgagatcatc gagaggtcgg
     3361 gcaagccgat tctgctgcac ccgatccgca cccgcgagat ggc
//
LOCUS       DATCWM010000163         3510 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_525123, whole genome shotgun sequence.
ACCESSION   DATCWM010000163 DATCWM010000000
VERSION     DATCWM010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3510
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_525123"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1386)
                     /locus_tag="VIQ50_03025"
     CDS             complement(<1..1386)
                     /locus_tag="VIQ50_03025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013216071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY9359379.1"
                     /translation="MISKFFIERPVLANVLAILMVVIGAVSLMRLSVAQYPNVVPPTI
                     SVTTRYPGASARAVVDTVALPIEQQVNGVDGMIYMQSWSAADGTYTLIVTFKIGMDIN
                     FAQVLVQNRVSSALAQLPQAVQAQGVTVQQKSTAILQFVTLTSPDDRYDSLFLANYAT
                     ISLQPELARLPGVGQVNIFGAGQYAMRIWLDPNKLYAFSLTTEDVVNALKGQNEQVTA
                     GQLGMPPAPNTQAFQYTLDIASRFDDVSQFENVVVKTESNGQMVHVRDVGRVELGAQT
                     YSQVFTLNGKPAAGIGIFQTLEANALDVANQVEGKMVQLAKSFPPGLTYSIPFDTTTF
                     VRESIKEVWKTLFEAAILVLIVIVVFLQDWRAMLVPMTTVPVTIIGAFAAMAALGFTI
                     NLSTLFAIVLAIGIVVDDAIVVVEGAVHHIERGMPRKEAAIQAMNELFGPIIGITLVL
                     MSVFLPAAFIPG"
     gene            complement(1396..2517)
                     /locus_tag="VIQ50_03030"
     CDS             complement(1396..2517)
                     /locus_tag="VIQ50_03030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014492830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY9359380.1"
                     /translation="MALLLGACGKENQYVAPPPPMVIVQFPLQQTVTPYLEATGNVAS
                     ENNIKLVARVEGYIQEIKYKDGDFVKKGAPLFIIEPEPYKVQLEQAQAAEEGAKATLV
                     NAEAEFTRQQQLQAKDVSTQANLDRARANRDTARASVLQAQANVQTAEINLGYTTVSA
                     PFDGVVTARKVSVGELVGGGHTTELATIVQMNPIWVWFNLSERDVQRVRVQVAKRGET
                     VADFIGKVPVQVGLQTDSGYPHKGVLDYVSPEVNQSTDTLLVRGAFENDKRQLLPGYF
                     VRVRVPLYPEQSLLVPEVAMGSDQAGRYVLVVNADGIVEQRRVQLGQTVGEMRVVESG
                     LKPDERVVVSGILEAVPGQKVDPQLQTPKAAAAEPAGSQ"
     gene            2849..3472
                     /locus_tag="VIQ50_03035"
     CDS             2849..3472
                     /locus_tag="VIQ50_03035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359381.1"
                     /translation="MATTLAVDHARTTALPLILALAVSTLCALAPASAQYACTTNYCI
                     SSQSTSFETPPGWPAVPVQTCCQTHWGALPGGIDWSNGAPIMICTGKPEFITTFPNCG
                     DPNNASLAFPLDYERPSFAIGVAWPNAKDYRYEMQSVPIVDGSDGTCAEFSSRPGQVT
                     NWWVYELKEPKRGSYVFTAAVSFQKDDKGYYAVLNSCKLKPPSAQVQ"
BASE COUNT          661 a         1118 c         1076 g          655 t
ORIGIN      
        1 gcccgggatg aaggcggcag gcaagaacac cgacatgagc acgagcgtga tgccgatgat
       61 cgggccgaac agctcgttca tcgcctggat tgccgcttcc ttccgcggca tgccgcgctc
      121 gatatgatgc accgcgcctt cgaccacgac gatggcatcg tcgacgacga tgccgatcgc
      181 cagcacgata gcgaacagcg tcgacaggtt gatggtgaag ccgagcgccg ccatcgccgc
      241 gaacgcgccg atgatggtga ccggcaccgt ggtcatcggc accagcatgg cgcgccagtc
      301 ctgcaggaac acaacgatca cgatcagcac caggatcgcc gcctcgaaca gcgtcttcca
      361 tacctccttg atagattcgc gcacgaacgt ggtcgtgtcg aaggggatgc tgtaggtcag
      421 cccgggcggg aagctcttcg cgagctgcac cattttgcct tcgacctgat tggcgacgtc
      481 cagcgcgttc gcctcgagcg tctggaaaat gccgataccg gctgccggct tgccgttgag
      541 cgtgaagacc tggctgtagg tctgcgcgcc gagctcgacg cgccccacat cgcgcacgtg
      601 gaccatctgc ccgttcgatt ccgtcttgac gacgacattc tcgaattggc tgacgtcatc
      661 gaaacggctc gcaatgtcga gcgtgtactg aaaagcttgc gtgttcgggg ccggtggcat
      721 gcccagctgc ccggcggtaa cttgctcgtt ctgtcccttg agcgcgttga cgacgtcttc
      781 ggtggtcagc gaaaacgcat agagcttgtt ggggtcgagc caaatgcgca tcgcatactg
      841 gccggctccg aagatgttga cttggccgac gcccggcaac cgcgcgagct ccggctgcag
      901 cgagatggtc gcgtaattgg caaggaacag gctgtcgtag cggtcatcgg gggaggtcag
      961 agtgacgaac tgcagaatcg cggtggattt ctgctgcacc gtcacgccct gggcctgcac
     1021 tgcctgcggc aactgcgcga gcgcgctgga gacgcggttc tgaaccagca cctgcgcgaa
     1081 attgatgtcc attccgatct taaaggtgac aatgagcgtg taggtgccgt cggcggcgct
     1141 ccaggactgc atgtagatca tgccgtcgac gccattgacc tgctgctcga tcggcagcgc
     1201 gacggtgtcg accaccgccc gcgcgctcgc gcccggatag cgcgtggtca ccgagatggt
     1261 cggcggcacc acgttgggat attgcgcaac tgagagccgc atgagcgaaa cggcgccgat
     1321 cacgaccatc aggatggcaa gtacgttcgc gagaacgggc cgctcgatga aaaatttcga
     1381 aatcatgacg cccggttatt gcgatccggc cggttcagcc gccgcggctt tcggcgtctg
     1441 cagctgcgga tccactttct ggcccggcac ggcttcgagg atgcccgaga cgaccacgcg
     1501 ctcgtcgggc ttgaggccgc tttcgacaac gcgcatctcg ccgacggtct gcccaagctg
     1561 cacccggcgc tgctcgacga tgccgtcggc gttgacgacg agcacatagc gacccgcctg
     1621 gtcgcttccc atcgcgacct ccggaaccag cagcgactgc tcggggtaaa gcggcacccg
     1681 cacgcgaacg aaataccccg gcagcaactg acgtttgtcg ttctcgaaag cgccgcgcac
     1741 cagcaacgta tcagtcgatt gattgacttc gggggatacg tagtcgagca cgcctttgtg
     1801 gggatagccg ctgtcggttt gcaatccgac ctggaccgga accttgccga tgaaatcggc
     1861 gacggtctcg ccccgcttcg cgacttgcac gcgcacccgc tgcacgtccc gctcactcag
     1921 attgaaccag acccagatcg gattcatctg cacgatggtc gcgagctccg tggtatggcc
     1981 gccgccgacc agctcgccga cggaaacctt gcgcgcggtc accacaccgt cgaacggggc
     2041 cgagaccgtc gtgtagccga ggttgatctc ggcggtttga acattcgcct gggcctgcag
     2101 cacgctcgcg cgggcggtgt cgcggttggc gcgcgcccgg tcgagattgg cctgggtgga
     2161 gacatccttg gcttgcaatt gctgctggcg cgtgaactcg gcttcggcgt tgaccagcgt
     2221 cgccttggcg ccttcctccg ccgcttgcgc ctgctccaat tgcactttgt agggctcggg
     2281 ctcgatgatg aataaaggcg cgcccttctt cacaaagtcg ccgtccttgt acttgatttc
     2341 ctggatgtag ccttccacac gcgcgaccag cttgatgttg ttctccgagg cgacattgcc
     2401 ggtcgcttcg aggtacggcg tgacggtctg ctggagggga aattgcacga tcaccatggg
     2461 cggcggtgga gcgacgtact gattctcttt tccgcacgcg cccagcagca aagccatcgc
     2521 agcgctcgcg aggacaggaa ggccggttgc gcgccgcaac gctttcgcga ggcgcgccat
     2581 attcaccctg tgcgccgatc gtaccggtga atttgcagcc aacaggacca agatcgacct
     2641 cgtcgcgccg cagacaggtt acgacgtgtt gttgttttcg cgccagccaa tagttcggct
     2701 ttcgccgaag atgccgcact caagtcttaa gccaagccgc gcgggctcaa ccggcgaccc
     2761 gccgcctgct cgatcgtttg cgcattttgc atggtagtgt acatcagcgg gcagagcccc
     2821 ggcaaaaggg cggcacgagg aacaagcgat ggctaccacc ctggccgttg accatgcgcg
     2881 caccaccgcg ttgcccttaa ttctcgcgct ggccgtctcg accctttgcg ctttagcccc
     2941 ggcgtcggcg caatatgcct gcaccacgaa ttactgcatc agcagccaga gcacatcgtt
     3001 tgagactccg cccggctggc cggcggttcc agtgcaaacc tgctgccaga cccattgggg
     3061 agcgctcccc gggggaatcg actggagcaa cggcgcaccc atcatgatct gcaccggtaa
     3121 gccggaattc atcaccacct tcccgaactg cggcgacccg aacaatgcgt cgttggcctt
     3181 tcccttggat tacgaacgcc cgagctttgc aatcggcgtc gcctggccga atgcaaagga
     3241 ttaccgctac gagatgcaaa gcgttccgat cgtcgacggg tcggacggga cctgcgccga
     3301 attctcgagc cgccccggtc aagtgacgaa ctggtgggtg tacgaactca aggagcccaa
     3361 gcgcggatcc tacgtgttca cagccgcggt cagctttcaa aaagacgaca aaggctatta
     3421 cgcggtgctc aacagctgca aactcaagcc gccgtctgcg caggtacaat agcccagcaa
     3481 acgaacacgc ggcaggcgat ggccacggcc
//
LOCUS       DATCWM010000164         2616 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_422477, whole genome shotgun sequence.
ACCESSION   DATCWM010000164 DATCWM010000000
VERSION     DATCWM010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2616
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_422477"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1451
                     /locus_tag="VIQ50_03040"
     CDS             <1..1451
                     /locus_tag="VIQ50_03040"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
                     /protein_id="HEY9359382.1"
                     /translation="FAPESVAGYCGIAAPVIRRIAREMSASDSAACYGRLGTCVQEFG
                     TLTSWGCDLVNVLTGNLDRPGGVMFPMPAASLDAALPKRKGFKMARWSSRVGGQPEVE
                     GMIPSSTMADEMLTPGDGQVRAMILLMTNPLRSALHSARLETAFAGLDFLVAIDFYVN
                     ETTRYADVILPTPSPAELASYELGFYHLSVRNVAKWSQAVVSPPRGAPETWQVLSTLS
                     ARLMGLQGGSEKNVDDFIFRRLAEGVVREDDRWPGLTVEEIVGTLGECVGPERIVDLL
                     LRIGAHGDGFGRKPEGLTLAKVQASTHGIDLGPLQPRLPDIINTVGGMIELAPSMLLG
                     DLARLRNRMMEPGRSMVLIGRRDLRTSNSFMHNLPALVKGPNRCTLQISPQDAAEIGA
                     KNGSLVRVTSRVGSVVAPVEVTEDLMPGVVSLPHGWGHDVEDSRLTVAKAHPGVNTNV
                     LTDDQAYDTPSGTAVLFGTPVSVGLTGEAPSG"
     gene            complement(1493..1921)
                     /locus_tag="VIQ50_03045"
     CDS             complement(1493..1921)
                     /locus_tag="VIQ50_03045"
                     /inference="COORDINATES: protein motif:HMM:TIGR03618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PPOX class F420-dependent oxidoreductase"
                     /protein_id="HEY9359383.1"
                     /translation="MTISPAIRELIDSGPLAHLTTLNSDGSPQVSVIWVGVDGNEFVT
                     AHTGEWQKVKNIRKDPRVALSLLGRGKNAMGLQEYLVVYGKARITEGGAAEILQRLAR
                     IYLGPDVEFPPEPLRSKPGFITHIAPVRYAGIGPWEPQPR"
     gene            complement(1958..2611)
                     /locus_tag="VIQ50_03050"
     CDS             complement(1958..2611)
                     /locus_tag="VIQ50_03050"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEY9359384.1"
                     /translation="MNTGIGDAVNLAWKLAAVLNGAGDNLLATYEQERISFARRLVAT
                     TDRGFTVVTKQGVVARWVRTRLVPLIAPALFRLAPVRRFMFRTVSQIGVNYRGSPLSA
                     GAAGTVRGGDRLPWVETRPGQDNFTPLASLAWQVHVYGKPRHGLAEACADLQLPLHVF
                     EWRKEMRRGGLRAALYLVRPDGYVALADPHADPDRLRSYFQQRGDIGQQTGQVRHAA"
BASE COUNT          459 a          846 c          854 g          457 t
ORIGIN      
        1 ccttcgcgcc cgaatcggtc gcggggtact gcggcatcgc cgcgccggtg atccgacgca
       61 tcgctcgcga aatgagcgcc tccgactcgg cggcgtgcta cggacgcctg ggaacgtgcg
      121 tgcaggagtt cggcacgctg acgagctggg gatgcgatct cgtcaacgtc ctgaccggca
      181 acctcgatcg cccgggcggc gtgatgtttc cgatgccggc ggcctcgctc gacgccgctc
      241 tgcccaagcg caaaggcttc aagatggcgc gctggagcag tcgcgtgggc gggcaaccgg
      301 aggtcgaagg catgatcccg agctcgacaa tggcggacga gatgctcacg cccggcgacg
      361 gccaggtgcg cgcgatgatt ctgctgatga cgaacccgct gcgcagcgcg ctgcattcgg
      421 cgcgtctcga gacggcgttc gccgggctgg acttcctcgt cgcgatcgat ttctacgtta
      481 acgagaccac gcgctacgcc gacgtcattc tcccgacgcc gtcacccgcc gagctggcaa
      541 gctacgagct ggggttctac cacctgtccg ttcgcaacgt ggccaagtgg tcgcaggccg
      601 tggtgtcgcc gccccgaggc gcgccggaga cgtggcaggt gctgtccact ctgagcgcga
      661 gactgatggg actccagggc ggctccgaga agaacgtgga cgatttcatc ttccgccgtc
      721 tcgccgaggg ggtagtgcgc gaagatgacc gctggcccgg gcttaccgtc gaagagatcg
      781 tcggcacgct tggcgagtgc gtcggcccgg agcgcatcgt cgacctgctg ctccgcattg
      841 gtgcgcacgg cgacgggttc ggccggaaac cggaggggct gacgcttgcc aaggttcagg
      901 cttcgacgca cgggatcgat ctggggccgc tgcaaccgcg actgcctgac atcatcaaca
      961 ccgtcggcgg gatgatcgag ctcgccccct caatgctgct cggtgatctc gcgcgtctgc
     1021 gaaaccggat gatggaaccc gggcggtcca tggtgctgat cgggcggcga gacctccgca
     1081 cgagcaattc gttcatgcac aacctgcccg cgctggtgaa ggggccgaat cgctgcacgc
     1141 tgcagatctc gccgcaggac gccgccgaga tcggcgcgaa gaacggcagc ctcgtgcgcg
     1201 tcaccagtcg tgtcggaagt gtcgtcgcgc cggtcgaagt caccgaggat ctgatgcctg
     1261 gtgtcgtcag tcttccccac ggctggggac acgacgtcga ggattcacgg ctgacagtgg
     1321 cgaaggcgca ccccggcgtg aacacgaacg tcctgaccga tgatcaggcc tatgacacgc
     1381 cgagcgggac tgccgtgctc ttcggcacac cggtgtcggt gggtctcacc ggcgaggcac
     1441 cctcgggata gacgagctat ggtcacctgg cgcgtccgat ttagaccctg agttaccgcg
     1501 gctggggctc ccatggaccg attccggcgt accgtaccgg cgcgatgtgc gtgatgaagc
     1561 ctggtttgct gcgcaacggt tcgggaggaa actcgacgtc gggacccaga tagattcgag
     1621 cgagccgctg aaggatctct gccgcgcccc cctccgtgat tcgggccttg ccgtagacga
     1681 ccagatactc ctgaagaccc atggcattct taccccggcc gagcaaggag agggcgacgc
     1741 gggggtcttt ccgaatattc ttgacctttt gccattcacc cgtgtgcgcc gtgacgaact
     1801 cgttgccgtc gacgccaacc catatcacgg agacctgcgg gctcccatcg ctattgagcg
     1861 tcgtcagatg agcaagggga cctgaatcga tgagctctcg gatggccgga ctaatcgtca
     1921 tatcgaagcc tctctcgcgc cgcccacgcg caatcgatca tgctgcatga cgaacttgcc
     1981 cagtctgctg gccaatatcg ccgcgttgtt gaaaataact gcgcaatcgg tcagggtcag
     2041 cgtgaggatc tgccagagcg acatagccgt cgggcctgac gagatagagc gccgcgcgga
     2101 ggccgccgcg ccgcatttcc ttccgccatt caaacacgtg gagtggtagc tgaaggtcgg
     2161 cgcacgcttc ggccaggccg tgtctcggct ttccgtacac gtgaacctgc catgcgagcg
     2221 aagcgagcgg cgtgaagttg tcttgccccg gcctggtctc aacccacggc agccgatcac
     2281 cgccgcgcac ggttccggca gcacctgcgc tgagtgggct gccacgatag ttcacgccga
     2341 tctgcgacac agtgcggaac atgaagcggc gcaccggggc gagtcgaaac agcgccggag
     2401 cgatcaaagg aacgagtctc gtgcgcaccc atcgagcgac aacgccctgc ttcgtcacca
     2461 cggtgaagcc gcgatcagtg gtggcaacca atcggcgtgc gaagctgatc cgctcttgct
     2521 cgtacgtcgc cagcaggttg tcgccggcgc cgttcagcac ggcggcgagt ttccacgcca
     2581 ggttcacggc atccccgatc ccagtgttca tcccct
//
LOCUS       DATCWM010000165         6775 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_287616, whole genome shotgun sequence.
ACCESSION   DATCWM010000165 DATCWM010000000
VERSION     DATCWM010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6775)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6775)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6775
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_287616"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..442
                     /locus_tag="VIQ50_03055"
     CDS             <1..442
                     /locus_tag="VIQ50_03055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0009143 - nucleoside triphosphate catabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="non-canonical purine NTP pyrophosphatase"
                     /protein_id="HEY9359385.1"
                     /translation="YGSPAFADDSGLAVDTLGGEPGIYSARWAGPDKDFQAAMQAVEE
                     RLRKRGAHAPSQRKAQFVCALCVAWPDGHVEDFDAAVHGTLVWPPRGENGFGYDPMFL
                     PDGHALTFGEMTNVEKHGLPPVSKGLSHRARAFLKLAEACLARG"
     gene            429..1592
                     /gene="hemW"
                     /locus_tag="VIQ50_03060"
     CDS             429..1592
                     /gene="hemW"
                     /locus_tag="VIQ50_03060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HEY9359386.1"
                     /translation="MQEGDRAASAFGVYIHWPFCLSKCPYCDFNSHVRYDGVDEARFA
                     RAFAAEIAATAARVPGRTVSTIFFGGGTPSLMQPATVAAVLDAVARHWAIARDVEVTL
                     EANPTSVEATRFRGFRAAGINRVSLGVQALDDAALRALGRLHSAQEALAAVAIARSTF
                     ERYSFDLIYARPGQTPRAWAAELERATEEAGEHLSLYQLTIEQETPFAALHAAGKLLI
                     PDDDSARALYDATQDVCATAGLPAYEISNHARPGAECRHNLVYWRAQEYAGIGPGAHG
                     RLDIAGERRATATEKRPQGWLSQVESLGHGIVSDEALTREQIADEFLLMGLRLAEGID
                     PARYTRLAGRPLEARRVTLLREQGALERTPEGRLRLTLAGFPLLDAVIADLAA"
     gene            complement(1595..2794)
                     /locus_tag="VIQ50_03065"
     CDS             complement(1595..2794)
                     /locus_tag="VIQ50_03065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator"
                     /protein_id="HEY9359387.1"
                     /translation="MLGGRQAWGSRPARACSAWLAALASIGLLAGCSGNLPDLASSPG
                     APQQPTTNIGEGKVKAGLILPLSASGNATVAAQSMRNAAEMALAEFNNPDLQLLVKDD
                     GGSAPGAQQAAQQALDEGAEIILGPLFALTVGPVGRAARARGVPVIAFSTDTNVAARG
                     VYLLSFLPEADVERIIGYAASQGRRSFAALVPDNAYGSVAEAAFKQAVGRAGGRVIAL
                     ERYPLDRAQMQTPVRNVAQAASQADAIFVPDGTDAVPTIVQTLTANGIDTKRVQLLGT
                     GLWEDAQIFSNPLLDGAWYAGPDSTGFRNFSARYRSRYGKDPVRTASLAYDAVALVAA
                     LVKTQGRQRFSDDVLTNSSGFTGIDGLFRFRPDGTNQRGLAVLRVSPTGGQIISPPPK
                     GFGGSAT"
     gene            2944..3888
                     /gene="rsmI"
                     /locus_tag="VIQ50_03070"
     CDS             2944..3888
                     /gene="rsmI"
                     /locus_tag="VIQ50_03070"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HEY9359388.1"
                     /translation="MRTTAPAAPGLRPVSDPAGRHYLLDGRPTAAPPLPAGLYLVATP
                     IGNLRDVTVRALEVLAAADLVACEDTRVTRKLLDRYGIATPLSAYHEHNAAQARPRLL
                     ARLGEGAAIALVSDAGTPLVSDPGYKLVREARAAGASVTAVPGPSAVLAALTLSGLPS
                     DRFFFEGFLPAKEAARRARIAELKRIPATLVLFETGARIAASLADLAAGLGAREAALC
                     RELTKLHEEVRRGDLVTLAQEASQASELRGEMVIVVAPPDRQAEVTAIDLDSLLRQAL
                     DRVSVKEAVAEVAAVTGTPRRDVYQRALALDKERGHGR"
     gene            3878..4282
                     /locus_tag="VIQ50_03075"
     CDS             3878..4282
                     /locus_tag="VIQ50_03075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HEY9359389.1"
                     /translation="MADERPRASPIQAPRPERQIAFRTGISAESRAAAFLVAKGFRIL
                     ARRWKSPVGEIDIIARRRTLLVFVEVKARERFDDAAWSVTDRQRLRIAAAAEAWLARY
                     ADSRIRDIRFDAILVAPGRIPRHITSAFEATG"
     gene            4332..5276
                     /gene="gshB"
                     /locus_tag="VIQ50_03080"
     CDS             4332..5276
                     /gene="gshB"
                     /locus_tag="VIQ50_03080"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004363 - glutathione synthase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HEY9359390.1"
                     /translation="MTLNVAVQMDPIERINIRGDSTFALLLEAQQRGHSIAYYTPDRL
                     ALRGAKLMAAVRPLKVRDRQGDHFTLGEPRRTELAEFDVILLRQDPPFDLAYITSTHL
                     LERIHPGTLVVNDPLAVRNAPEKMFVMEFPDLMPPTLITRDLTEIKAFREEHGDIVMK
                     PLYGKGGEAVFRLAKEDLNFGSLYDLFAVTFREQWVVQKFLPAVKDGDKRILLVDGEF
                     AGAVNRVPAPDDLRSNMVRGGIPKETELSARDREICARIARPLRERGLLFVGIDVIGG
                     YLTEINVTSPTGIRAVKDLGGPDAAALIWDKIEAKRQA"
     gene            complement(5318..6334)
                     /locus_tag="VIQ50_03085"
     CDS             complement(5318..6334)
                     /locus_tag="VIQ50_03085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEY9359391.1"
                     /translation="MSRAWVAVGVLALPWAAGGVDGWSVRASFAQEATPAQQIWTVPE
                     IGALPNNDYGRLVRRGRDLITATYAHIGPEVPDRAKRFAGNNLACGNCYLQAGTKKFG
                     IPLFGLLEKYPRYSARSGSPITIEDRFNACMTRSMNGRPLPVSSPEMQAMVAYIKFLS
                     TGVSPGQLVPGLGTGNMPELDRPADPARGEAGYANACVVCHGPDGAGIRRSLPTTDLG
                     YMMPPLWGNDSFNDGAGMARLITAANFLHFNMPHGVDYLNPQLSPEQAWDIAAYVVSR
                     PRPHKAGLEKDFPDLLEKPVDAPYGPYADGFSEQQHKYGPFAPIRAAIAKLKAEQKGA
                     PAPR"
     gene            6472..>6775
                     /locus_tag="VIQ50_03090"
     CDS             6472..>6775
                     /locus_tag="VIQ50_03090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium chelatase domain-containing protein"
                     /protein_id="HEY9359392.1"
                     /translation="MVQRVATVAFEGIEARAVDVQVQVAPGLPAFHVVGLPDKAVSEA
                     RERVRAALVTSGLALPARRITVNLAPADLPKEGSHYDLPIALGLMAAIGAIPADALS"
BASE COUNT         1131 a         2271 c         2212 g         1161 t
ORIGIN      
        1 ctacggctcg ccggcattcg ccgacgattc cggactcgcc gtcgacacgc tcggtggtga
       61 gcccggtatc tactcggcgc gctgggcggg tccggacaag gactttcagg ctgccatgca
      121 ggcggtggag gagaggttgc gcaagcgcgg cgcgcatgcg cccagccaac gtaaggcgca
      181 attcgtgtgc gcgctctgcg tcgcctggcc cgatggccac gtggaggact tcgacgccgc
      241 cgtgcacggc accctggtct ggcccccgcg cggcgagaac ggcttcggct acgatccgat
      301 gtttttgccc gatggacacg cgcttacctt cggcgagatg acgaacgtag agaagcatgg
      361 cctgccgccc gtgagcaaag gcctctcgca ccgcgcccgc gcgttcctga agctggcgga
      421 ggcttgtctt gcaagagggt gatcgcgcgg cttcggcgtt cggcgtttac atccattggc
      481 cgttctgcct atcgaagtgc ccgtattgcg acttcaacag ccatgtgcgg tacgatggcg
      541 tcgatgaggc gcgtttcgcg cgcgccttcg ccgccgaaat tgccgcaacc gctgcgcgcg
      601 tgcccggacg gaccgtctcc acgattttct tcggcggcgg cacgccgtcg ctgatgcagc
      661 ccgcaacggt ggctgcagtc ctcgacgccg tcgcccggca ctgggcgata gcccgcgatg
      721 tggaagtgac cctcgaagcc aacccgacca gcgtcgaggc gacgcgcttt cgcggctttc
      781 gcgcggctgg catcaatcgc gtctcgctgg gcgtgcaggc tctcgatgat gcggcgctca
      841 gagcgctcgg gcgactgcat tccgcgcagg aggcgctcgc ggcggtggcg atcgcgcggt
      901 ccaccttcga gcgttattcg ttcgatctga tctacgcgcg cccggggcag acgccgcgag
      961 cctgggccgc cgaactcgag cgcgcgaccg aagaggccgg cgagcacctc tcgctctatc
     1021 aactcacgat cgagcaggaa acgccgtttg ccgcgctgca tgcggccggc aagctcctca
     1081 tcccagacga cgattctgcc cgcgcgctct atgacgcgac gcaagacgtt tgcgcgaccg
     1141 ccggccttcc cgcctatgag atttccaacc acgcgcggcc gggagccgag tgccggcata
     1201 atctcgtcta ctggcgcgcg caggaatatg ccgggatcgg accgggtgcg catggccggc
     1261 tcgacatcgc gggcgagcgg cgcgccaccg caaccgagaa gcggccacag gggtggctga
     1321 gccaggtgga atcgctcggg catgggatcg tgagcgacga ggcgctgacg cgagagcaaa
     1381 tcgcggacga gtttctactg atgggattgc gcctggccga aggcatcgat cccgcccgct
     1441 acacgcgtct cgccggccgg ccgctcgagg cgcgccgcgt cacgctcctg cgcgagcaag
     1501 gcgcgcttga gagaacgccg gagggtagac tgcgtctgac gctggccggt ttccccctgc
     1561 ttgacgcggt gattgccgat ctcgccgcgt gaggctaggt cgccgagccc ccgaaaccct
     1621 tgggtggcgg gctgatgatc tggccacccg tcggcgacac ccgcagcacc gcaagtccgc
     1681 gctggttcgt gccgtccggg cggaagcgga acaggccgtc gatgccggtg aaccctgagg
     1741 aattggtcag gacatcatcg gagaagcgct gcctgccctg agttttgacc agcgccgcaa
     1801 cgagcgcgac cgcgtcatag gccaacgagg cggtgcgcac cggatccttg ccgtagcggc
     1861 tgcggtagcg ggcggagaag ttacgaaagc cggtcgaatc cggtcctgca taccaggcgc
     1921 cgtcgaggag tggattggag aagatttgcg cgtcctccca aagaccggtg ccgagcagct
     1981 gcacgcgttt ggtgtcgatg ccgttcgcgg tcagcgtctg cacgatcgtg ggcaccgcgt
     2041 ccgttccgtc cggcacgaag atggcgtccg cctggctcgc ggcctgggcg acgttgcgca
     2101 cgggcgtctg catctgcgcc cgatcgagcg ggtaacgctc aagcgcgatg acgcgcccgc
     2161 cggcgcgccc caccgcctgt ttgaacgccg cttccgccac gctgccatag gcattgtccg
     2221 gaacaagcgc cgcgaacgag cgacggccct gactcgcggc atagccgatg atgcgttcga
     2281 catcggcttc aggcagaaag ctgagcagat agacgccacg cgccgcgaca ttagtgtcag
     2341 tcgagaacgc gatcaccggc acgccgcggg cgcgtgctgc acgtccgacc ggaccgacgg
     2401 tgagcgcaaa cagcgggccc aggatgatct ccgccccttc gtcgagggcc tgttgcgctg
     2461 cctgctgcgc gccgggggcg ctgccgccat cgtccttcac caacagctgg agatcaggat
     2521 tgttgaactc cgcgagcgcc atctcggcgg cgttgcgcat ggattgcgcc gcgaccgtgg
     2581 cgttaccgct cgcggacaat ggcaggatca gacccgcctt gaccttgcct tcgccgatat
     2641 tggtcgtggg ctgctgcggc gcgcctggcg aggaggccaa atcgggaagg tttcccgagc
     2701 agcccgccag caggccgatc gatgcgagcg cggcaagcca cgcagaacaa gcgcgcgcag
     2761 gccgcgagcc ccaggcctgc cgtcctccta acatgggagg tctcctcgcc gacgaccgag
     2821 attgtcgacg ccaccccacg ccggcaatcg ggcattttgt cggtgaatgg ttaaccaagt
     2881 gaaaaagaag tgatttttac accggccatg acgcggcgag gtgccgccgc taaactaagc
     2941 gagatgagga cgaccgcacc cgccgcccct ggcctacgcc cggtcagcga ccccgccggt
     3001 cggcactatc ttctcgacgg ccgccccacc gccgcgccgc cgctgccggc cgggctttat
     3061 ctggtcgcca ctccgatcgg caatttacgc gacgtcaccg tgcgcgcgct ggaggttctc
     3121 gccgccgccg acctggtcgc atgcgaggac acccgcgtca cccgcaagct tctcgaccgt
     3181 tatggcatcg ccactccgct cagcgcgtat cacgagcaca atgcggcgca ggcgcgtccg
     3241 aggctcctcg ctcgcctcgg cgaaggcgcc gccatcgcgc tggtctcgga cgccgggaca
     3301 ccgctcgtgt ccgatcccgg ttacaagctc gttcgggaag cacgggcggc gggcgcaagc
     3361 gtgaccgcgg tgccaggacc ctccgccgtg ctcgcggcgc tgacgctgag cgggctgccg
     3421 agcgaccgat ttttcttcga gggtttcttg ccggcaaagg aagcagcacg gcgcgcgcgc
     3481 atcgccgaac tcaagcgcat cccggcgacg ctcgtcctgt tcgagaccgg cgcacgcatc
     3541 gcggcgtcgc tcgccgacct tgccgccggc cttggtgcgc gcgaggccgc gctctgtcgc
     3601 gaactcacca aactccacga agaggtgcgg cgcggtgatc tcgtgacgct tgcgcaggag
     3661 gcgtcgcaag ccagcgagct gcgtggcgag atggtgatcg tcgtagcacc gcccgaccgc
     3721 caggctgagg tgactgcgat cgatctcgac tccttgctcc gccaagcgct cgaccgtgtt
     3781 tcggtcaagg aggcagtggc cgaggtcgcc gccgtcaccg ggaccccgcg ccgcgacgtc
     3841 taccaacgtg ctctcgcact cgataaggag cgcggccatg gccgatgagc ggccgcgcgc
     3901 aagtccgatc caagctccgc gtcccgagcg ccagatcgcg ttccgaaccg gcatttccgc
     3961 cgagagccgc gcggcagcgt ttctcgtcgc caaaggcttt cgcattctcg ctcggcgttg
     4021 gaagagcccg gtcggggaaa tcgatatcat cgcccgccgc cgaaccctgt tggtctttgt
     4081 cgaggtcaag gcgcgcgaaa gattcgacga tgcggcctgg tcggtcaccg accgccagcg
     4141 cttgcgcatc gccgccgccg ccgaagcatg gctggcccgc tatgccgaca gccgtatccg
     4201 cgatatccgc ttcgacgcca tcttggtggc gccgggccgg attccacggc atatcacctc
     4261 cgctttcgaa gccaccggct gatgcaatcg ggcgatcgcg tgcgctacca aaatagatct
     4321 tcggggcgac gatgactctc aatgttgccg ttcaaatgga ccccatcgag cggatcaata
     4381 tccgcgggga ctccaccttt gcgctgctgc tcgaagcgca acaacgcggg cattccatcg
     4441 cctattacac cccggaccgg ttggcgctgc ggggcgcgaa gctgatggcc gccgtgcggc
     4501 cgctcaaggt gcgcgaccgg cagggcgatc atttcacgct gggcgagccc cgccgcacgg
     4561 agcttgctga attcgatgtg atcttgctgc gccaggatcc gcccttcgac cttgcctata
     4621 tcacgagcac ccatctgctc gaacgcatcc atcccggcac gctggtcgtc aatgatccgc
     4681 tggcagtgcg caatgcgccg gaaaaaatgt tcgtgatgga atttcccgat ctcatgcctc
     4741 cgacgctgat cacccgcgac ctcacggaaa tcaaggcgtt ccgcgaggag catggcgaca
     4801 tcgtgatgaa gccgctctac ggcaagggcg gcgaggcggt gtttcggttg gcgaaggaag
     4861 atctcaactt tggatcgctc tacgacctct ttgccgtgac tttccgcgag caatgggtgg
     4921 tacagaagtt cttgcccgcc gtgaaagatg gcgacaagcg catcctcctg gtcgacggtg
     4981 agttcgcggg agcagtgaac cgggtgcccg cgcccgacga tttgcggtcc aacatggtcc
     5041 gcggtggcat tccgaaggaa acggagctct cggcgcgcga ccgcgagatc tgtgctcgca
     5101 tcgctaggcc cttgcgcgag cgtgggctgc tcttcgtcgg catcgacgtg atcggcggct
     5161 atctcaccga gatcaacgtc acctcgccga ccggcattcg cgccgtgaag gacctcggtg
     5221 gaccggacgc agccgcacta atctgggata agatcgaagc caagcgacaa gcgtaaatac
     5281 cgacaccgca tgaggcgccg ccacgcgcct gacggcatca gcgcggcgca ggcgcgccct
     5341 tctgttccgc cttgagcttc gcgatggcag cgcgaatcgg cgcgaacggc ccgtatttgt
     5401 gctgctgctc gctaaagccg tccgcatagg ggccataggg cgcatcgacc ggcttttcca
     5461 gaagatcggg aaagtccttc tcgaggccgg ctttgtgcgg ccgcggccgg gagacgacat
     5521 aggccgcaat atcccacgct tgttcgggcg aaagctgcgg gttcaggtag tcgaccccat
     5581 gcggcatgtt gaagtggaga aaatttgccg ccgtgatgag gcgcgccatt ccggcgccgt
     5641 cgttgaagct gtcgttgccc cagagcggag gcatcatgta gccgagatcc gttgtcggca
     5701 ggctgcgacg aatgccggcg ccatcggggc cgtgacacac gacgcaggca ttggcgtagc
     5761 ccgcctcgcc gcgcgcggga tcggctgggc gatcaagctc cggcatgttc ccggtgccca
     5821 agcccggcac cagctgcccg ggcgaaacgc cggtcgacag gaatttgata taggccacca
     5881 tcgcctgcat ttccggagag ctcaccggta acggccgtcc gttcatgctg cgggtcatgc
     5941 aggcgttgaa acggtcctcg atggtaatcg gcgagccgga gcgggcgctg tagcgcggat
     6001 acttttccaa taatccgaag agcgggatgc caaacttctt cgttccggcc tgaaggtagc
     6061 aattgccgca ggcgagatta ttgccggcaa accgcttcgc gcgatcgggc acctcagggc
     6121 cgatatgggc gtaagtcgcg gtgatgaggt cgcgcccacg ccgcaccagg cgcccgtagt
     6181 cgttattcgg cagcgcgccg atttccggaa cggtccagat ctgctgcgcc ggcgtcgcct
     6241 cttgcgcaaa gctcgccctg acggaccacc catcgacccc tcccgccgcc cacgggagcg
     6301 cgaggacgcc taccgccacc caagctctcg acatccaatc acttcccatc cgaaaccgcc
     6361 caacagccgc gcggacagct ttgtaccaca gggtcattgg cagctatgtt ctcggattgt
     6421 tcttgctgct gatgcgattt tccgctattt tttcccgtaa gcaggggcag catggtccag
     6481 cgcgtcgcta ccgtggcgtt cgagggcatc gaggcgcgcg ccgtcgatgt tcaggttcag
     6541 gttgcgccgg gacttcctgc atttcacgtc gtgggactgc ccgacaaggc ggtgtcagag
     6601 gcccgcgaga gggtgcgcgc ggcgctggtc acctccggct tggcgctgcc cgctcgccgc
     6661 atcacggtca acctcgctcc cgctgacctg ccgaaggaag gcagccatta cgatctgccg
     6721 attgcgctgg gcctgatggc ggcgatcggc gccattccgg ccgatgcgct gtccg
//
LOCUS       DATCWM010000166         3275 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_271369, whole genome shotgun sequence.
ACCESSION   DATCWM010000166 DATCWM010000000
VERSION     DATCWM010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3275
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_271369"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..323)
                     /locus_tag="VIQ50_03095"
     CDS             complement(<1..323)
                     /locus_tag="VIQ50_03095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY9359393.1"
                     /translation="MSQIRLTAMAVALSAAGFATTGLAQQAQRPQIETTKVDGTDNVY
                     IFRNGNHQSMFIVTKDGVIATDPIAYGRPTGGQDYIAEIKKVTDKPIKFLIYSHHHYD
                     HIAGG"
     gene            434..805
                     /locus_tag="VIQ50_03100"
     CDS             434..805
                     /locus_tag="VIQ50_03100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359394.1"
                     /translation="MRASPKAGEEGQRYQVCGDAKSQFDDPTIAHDRFALGKTNLHVV
                     MVEERLVEWIYCLVYGLLGDEKQSSLVRVIAYSQPLLRRCDQVQQFRRQRFGRLDVYP
                     YGAYITTHPDCRDRNTRIVGE"
     gene            1382..>3275
                     /locus_tag="VIQ50_03105"
     CDS             1382..>3275
                     /locus_tag="VIQ50_03105"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEY9359395.1"
                     /translation="MDRVLLEAVGNVSQRWVGSPLERKEDQALLTGQARFIDDLSPIP
                     GIRFAAILRSPHPHARIGRIDLARARDLPGVRGIVTGKDVSDLIGPVPSVVKAPLAYY
                     PIAIDRVRYVGEPVAVVIADTRYIAEDACDLIGVEYEVLPAASDLRSATARDAPVLHE
                     RVGSNIISRRSFSYGNPDAAFAVADRVFEFSYSYPRYASTPMETFGVIAQFERAPDRY
                     TVWSNFQGPFVVQPLMASALRVPGHRLRLITPPSSGGSFGIKQAVFSYIVLLAAVSRK
                     TGVPVKWIEDRAEHLTASSASSDRVGTVAAAFTKDGELTGLRFRNTANMGAHVRPPEP
                     ASLYRMHAASNGCYKVQNISIDNELVVTNCTPVGLNRGYGGPQFYFALERIMDIAARG
                     LAMDPAELRRRNFISVDAFPYRAPAGAIFDAGDYDAALSELLRIADYDELKRRRDEVR
                     RKGGLFGIGLAAGVEPSGSNMAYVSLAQTAQDRRRADRKSGANASAVVSVDPSGQVTL
                     RLCSTPNGQGHATVAAQIVADALGLHPNDVDVVTEIDTLTSAWSIASGNYSNRFAAIV
                     VDAIAKCAEQVAQKIKLLAADTLDAAPEEIELREGYARVRGQSNKGLPFRKAAARAHW
                     DPAGLPD"
BASE COUNT          610 a         1016 c         1010 g          639 t
ORIGIN      
        1 ttgccgccgg caatgtgatc atagtggtgg tggctgtaga tcaggaactt gatcggctta
       61 tcggtcacct tcttgatctc ggcgatgtaa tcttggccgc cggtcggtcg gccgtaggcg
      121 atcggatcgg tcgcgatcac gccgtccttg gtgacgatga acatcgattg atggttgccg
      181 ttgcggaata tgtagacgtt gtcggtgccg tcgaccttgg tggtctcgat ttgcggccgt
      241 tgtgcctgct gcgccagccc cgtggttgcg aacccggcgg cactcaacgc gaccgccatg
      301 gctgtgagac gaatctgtga cattgacgag tcctccctcg tgcttctcgg gccgcgccgc
      361 ctgtttccgc ggcgccgccc tgctgcaagt tatagtatag gcgcggacga gataccacgt
      421 atcgaacgtt taggtgcggg cctcaccgaa ggccggggag gaaggccagc gctaccaagt
      481 gtgcggcgat gcaaaatcgc aattcgacga cccgaccatt gcgcacgacc gctttgcgct
      541 cggcaaaact aatttgcacg tcgtgatggt cgaggaacgt ttggtcgagt ggatatactg
      601 ccttgtatac ggcctccttg gcgacgaaaa gcagtcgtcc ctggtaaggg tcatcgccta
      661 ttctcagccg ctcttgcggc gttgcgacca agtccagcaa ttcaggcggc aacgattcgg
      721 ccggctcgac gtctatccct atggcgccta tatcacgacc catcccgact gccgcgaccg
      781 caacacgaga atcgtgggcg agtgagccga cgactcctgg gggccaggct ggcgctcccc
      841 cggaagttct cggtagtgcg cattcggggt gccccaatcg cttgaggagt tgacgtgcca
      901 caatgcgagc cgagccgctc gcacgccgca ccttgacgac actcgaggcg aaggcaggag
      961 cttcctccgg caataacgca tcttcatcgc caggtgagat caagcgatgg ccgatcacga
     1021 cgcctggaaa agagagggca tcgattgctg actggagcaa gggatcgacc gtcataatca
     1081 ttctcggcag ggattatcgg tttcgtggat cgtgcgcatt tgggcgccag cgaacacgca
     1141 acactcggct caacaattcc tcctgcatca accgctcgca tagcgctgcc gtgatactat
     1201 tcccggcgcg aggtaactga tgtttgatct tgcggcctcg acggccacct gcggctcggt
     1261 gcgcctctat aacggcaaat gattttgctc gttgtcaatc ttgtcgcgac gacccggctg
     1321 gtcctataga tcatgcaacg agacgaaacg gccaaaacgg cgaggttaac ggttttccaa
     1381 ggtggaccgc gttttgctgg aagcagtcgg gaatgtgtcg cagcgatggg tcggctcgcc
     1441 ccttgagcgc aaggaagatc aggcgctcct gaccgggcag gctcgcttta tcgacgatct
     1501 ctcgccaatt ccgggaatcc gctttgcagc gatcttgcgt tcgccccatc cgcacgcacg
     1561 gatcggacgg atcgatctcg cgcgagcgcg ggacctgcca ggggttcggg gcatcgtcac
     1621 cggcaaggac gtcagcgatc tgattggacc ggtgccgagc gtcgtgaagg ctccgctcgc
     1681 ctactatccc atcgcaatcg accgggtacg atacgtcggc gagcccgttg ccgtggtaat
     1741 tgcggacacg cgttacatcg cggaagacgc gtgcgacctg atcggcgtcg aatatgaagt
     1801 gcttccggca gcgtccgacc tgcgaagcgc caccgcgcgc gacgccccgg tgctccacga
     1861 gagggtcggt tcgaacatca taagccggcg cagcttcagc tacggcaacc cggatgctgc
     1921 ctttgccgtg gctgatcgag tgttcgagtt ctcgtactcg tatccgcgct atgcctccac
     1981 gccgatggag acgttcggcg tcattgcgca attcgaacgg gcccctgacc gttacacggt
     2041 atggtcgaac ttccaggggc cgttcgtggt ccagccgctc atggccagcg cattgcgtgt
     2101 gcctggccac cgacttcgcc tcatcacgcc gccgagcagc ggcggaagtt tcggtatcaa
     2161 gcaggccgtt ttttcgtaca tcgtccttct cgccgccgtc agccgcaaga cgggcgtgcc
     2221 cgtcaagtgg atcgaagatc gcgccgaaca cctcacggcc tcgtccgcct caagcgatcg
     2281 cgtaggaacg gtcgcggcgg cgttcacgaa ggacggcgag ctcactggat tgcggttcag
     2341 gaacaccgcg aacatgggcg cccacgtgcg gccgcccgag cccgcctccc tctatcgcat
     2401 gcacgccgcc tcaaacggct gctacaaggt gcagaacatt tccatcgaca acgagctcgt
     2461 tgtcacgaac tgcacacccg tgggtctcaa tcgaggatac gggggaccac agttctattt
     2521 tgccctcgaa cgtatcatgg acatcgcggc gcgcgggctc gccatggatc cggcggaact
     2581 gcgccgtcgc aatttcattt ctgtcgatgc tttcccttac agagcgccgg caggcgccat
     2641 attcgacgcc ggcgactacg atgcggcgct gtcggagctc ctgcggatcg ccgactatga
     2701 cgagctcaaa cgccggcgcg acgaagtccg ccgcaaggga gggcttttcg gcatcggcct
     2761 ggcagcgggt gtagaaccat ccggctcgaa tatggcctat gtttcgctgg cgcagacggc
     2821 gcaagaccgc cgccgtgccg accgcaaatc gggcgctaat gccagcgcag tggtctcggt
     2881 cgatccgagc ggacaagtca cgttgcgcct gtgcagcacc ccgaatggcc agggccatgc
     2941 gacggttgcc gcgcagatcg tcgccgacgc gctcggactg caccccaacg acgtcgatgt
     3001 ggtgacggag atcgacacgc tgacgagcgc ttggtcgatt gcgtcgggaa attactcgaa
     3061 ccgcttcgcg gcaatcgtcg tcgatgccat cgccaagtgc gcggaacaag tcgcgcagaa
     3121 aatcaaattg cttgccgctg acaccctgga tgctgctccc gaagagatcg agctacgcga
     3181 aggctatgcc cgcgtgcgcg gtcagtccaa caagggattg ccgttccgca aggcggcggc
     3241 gcgcgcgcac tgggaccccg ccggtttgcc ggacg
//
LOCUS       DATCWM010000167         3080 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_454816, whole genome shotgun sequence.
ACCESSION   DATCWM010000167 DATCWM010000000
VERSION     DATCWM010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3080
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_454816"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(25..1098)
                     /locus_tag="VIQ50_03110"
     CDS             complement(25..1098)
                     /locus_tag="VIQ50_03110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEY9359396.1"
                     /translation="MTDQRTTAPSVPTHGAARLPSVEVESYNVELKDEDGLLGDRASK
                     GAFREILERWRKPLRKAGDDPFGDEPSSEISRKKLDSLLAQGDPEAAGVVQGAVEDFA
                     QELALVIRRFLKLKAWRDTEKIVVGGGFRASRIGELTIGRAAVILKSEKVVIDLVPIR
                     NDPDEAGLIGAVHLAPRWMFEAHDAIIGVDIGGTNVRAGIVELNLKKASDLSKARVWK
                     FELWRHADEKSVTREETVKELIDMLSRLIARADKEDLRLAPFIGIGCPGVIEADGTIT
                     RGAQNLPGNWESKSFHLPRELHSAIPTIGEHEMMIVMHNDAVVQGLSEVPFMRDVTRW
                     GVLTIGTGLGNGCFTNRTAAGKD"
     gene            complement(1162..2076)
                     /locus_tag="VIQ50_03115"
     CDS             complement(1162..2076)
                     /locus_tag="VIQ50_03115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9359397.1"
                     /translation="MKSIFVDCNNQLAPVFARVQRPDDPPISVNRDPFQSADLPRLLA
                     GYEVCLDDHSYMPTEAIAQCRGLKHIVFLGTGASSYMDVPALNRLGIDVHTIKGYGDI
                     AVAEHTMALIFASCRDLARMDRAVRAGVWEPLESMQLNGKTLGLIGLGGIGGEVARIA
                     RGVGMEVIGWNRSPRPQAGVPLVKLDELLARADVISLHLVLNDETRGFLDAERLGRAK
                     RGVILVNTARAALVDEAALLAALASGQIRHAGLDVFHAEPLRADHSLARMENVTLTPH
                     AAFRTLEASETLMRRAIDIVRRLAAPSP"
     gene            2381..3007
                     /locus_tag="VIQ50_03120"
     CDS             2381..3007
                     /locus_tag="VIQ50_03120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007614757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359398.1"
                     /translation="MKQMTRRVFGVAGFALLLATSASFAQQPPPTVRIRGQIEKVDGD
                     VFDIKTRNGEMVKVKLVDPARVLAFVKASLADINVGKFIGVTAMPQADGSQKAIAVHI
                     FLDTQKGVVADRHTPWDLQPGSTMTNAIVDTTVAGVDGQVITVKYKDGEKKVIVPPTA
                     TIVAYAPGDKSELKPGAQVIIFGATKQADGSLTTPAISVGRDGVTPPM"
BASE COUNT          540 a          976 c         1005 g          559 t
ORIGIN      
        1 attgtcgccg cttgggccgg ggcgtcaatc cttgccggcc gccgttcgat tggtgaagca
       61 gccgttgccg agaccggtgc cgatcgtcag cactccccag cgcgtcacat cgcgcatgaa
      121 cggcacctcg ctcaagccct gcaccaccgc gtcattgtgc ataacgatca tcatctcgtg
      181 ctcgccgatg gtcggaatgg ctgaatgcag ctcgcgcggc aggtggaaac tcttgctctc
      241 ccagtttccc ggcaaattct gcgctccgcg cgtgatagtg ccgtccgctt cgatgacgcc
      301 cgggcagcca atgccgatga aaggcgccag gcgcaggtcc tccttgtcgg ctcgcgcgat
      361 caggcgcgac agcatgtcga tgagctcctt caccgtctct tcgcgcgtga cactcttttc
      421 atcggcatgt cgccacagct cgaacttcca gaccctcgcc ttggagaggt cgctcgcctt
      481 tttcaaattg agctcgacga tgccggcccg gacgttggta ccgccgatgt ccacgccgat
      541 gatcgcgtcg tgcgcttcga acatccagcg cggcgccaaa tgcacggcgc caatcaagcc
      601 ggcttcgtcg gggtcgttgc ggatgggcac gagatcgatg accaccttct ccgatttgag
      661 tattacggct gcacgaccga tggtgagctc gccgatcctg ctggcgcgaa agccgccgcc
      721 gacgacgatc ttttccgtat cgcgccacgc cttgagcttg aggaagcggc ggatgacgag
      781 ggcgagctct tgcgcgaagt cctcgactgc gccttgcacg accccggcgg cctcggggtc
      841 tccttgcgcg agaagcgaat cgagcttctt cctgctgatc tcgctgctgg gctcatcgcc
      901 gaacggatcg tcgccggcct tacgcagcgg tttgcgccag cgctcgagga tctcgcggaa
      961 cgccccctta ctggcgcggt cgccgagcag gccgtcctca tccttcagct cgacgttgta
     1021 gctttcaacc tcgacggagg ggaggcgggc agcgccatgc gtcggaacgc tcggcgcggt
     1081 cgtcctctga tcggtcatca atcggttcct atggcaagcc catgacaact gcaaagaggg
     1141 gcaaaggttt cgatgcgtcg ctcagggcga tggggccgca agccggcgta cgatgtcgat
     1201 tgcccgccgc atcagcgttt ccgacgcttc gagagtgcgg aaggcggcgt ggggggtcag
     1261 cgtgacgttc tccattcgcg ccagcgaatg atccgccctg agcggctcgg catgaaacac
     1321 gtcgagcccg gcatggcgga tttggccgct tgccagcgcc gccaggaggg cggcttcatc
     1381 cactagcgcc gcccgcgcgg tattgacgag tatcaccccc cgtttggcgc gaccaaggcg
     1441 ttcggcgtcg agaaatcccc gtgtctcgtc gttaaggacg aggtggagcg agatcacgtc
     1501 ggcccgtgcc agcagttcat cgagcttgac cagcggtacg ccggcttgcg gccgcggcga
     1561 gcgattccag ccaatcacct ccatgccgac accgcgcgcg atgcgcgcca cctctccacc
     1621 gatgccaccg agcccgatca gaccgagcgt cttgccgttg agttgcatgc tttcgagcgg
     1681 ttcccacacg ccggcccgca ccgcccggtc catgcgcgcg agatcgcggc aggaggcgaa
     1741 tatcagcgcc atcgtgtgct cggcgactgc gatgtcgccg tagcccttga tggtgtgcac
     1801 gtcgattccc agccggttca gcgcgggcac gtccatgtag ctcgacgcac cggtaccgag
     1861 aaacacgatg tgcttgagcc cgcggcactg ggctatcgct tcggtcggca tgtaggaatg
     1921 gtcgtcgagg cacacttcgt agccggcgag cagccgcggt aggtcggcgg attgaaatgg
     1981 atcgcgattg accgaaattg gcgggtcgtc gggccgttgc acgcgcgcaa acaccggtgc
     2041 gagctgattg ttgcagtcga cgaagatcga tttcatgtcg tgccggtgcc cggccccgtt
     2101 tgtaggcagt accgtatcga cgggcaagca gggagagcgg gacatggatg gcgaggcgag
     2161 cgcgcgcggc acgtgcgggg tatggccatc gccgtcggcg ggggcaacac cgggccgata
     2221 ttgagcattc acgtttgcga gtgctggtgc caaagagctt gcgcgctgcc atccagattg
     2281 atctcatgga attatcagcg gaccggccgg aataagcgag gcggggagtt gttgttgcat
     2341 cgtcgacgtt cgccgctgag gagattttcg ggaggacgac atgaagcaga tgacacggcg
     2401 cgttttcggc gtggcgggct ttgccctgct gctcgccaca tccgcgagct ttgcccagca
     2461 accgccgccg actgtgcgca tccgcggcca gatcgaaaaa gtggacggtg acgtcttcga
     2521 catcaagacc cgcaacgggg agatggtgaa ggtaaagctc gtcgacccgg cgcgtgtgtt
     2581 ggcgttcgtc aaggcgtcgc tggccgacat caacgtcggc aaattcatcg gcgtcaccgc
     2641 catgccgcag gccgacggca gccagaaggc gatcgccgtc cacatctttc tcgacacgca
     2701 gaaaggtgtc gtggccgaca ggcatacccc gtgggatctg cagccgggca gcaccatgac
     2761 caacgcgatc gtggacacga ccgtggccgg cgtcgacggc caggtgatca cggtcaagta
     2821 caaggacggg gaaaagaaag tcatcgttcc gcccaccgcg acgatcgtcg cctacgctcc
     2881 tggggacaag agcgagctca agccgggtgc ccaggtcatc atctttgggg caaccaagca
     2941 ggcagatgga tcattgacga cgccggccat cagcgtcgga cgtgacggtg tcaccccgcc
     3001 gatgtgagcg cgcgagccgg gccgtagcgt cagcggcgtg gaatttgcgc cccgccgcgg
     3061 cgggcgggcg cgtgcgccga
//
LOCUS       DATCWM010000168         5020 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_17665, whole genome shotgun sequence.
ACCESSION   DATCWM010000168 DATCWM010000000
VERSION     DATCWM010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5020
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17665"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..747)
                     /locus_tag="VIQ50_03125"
     CDS             complement(<1..747)
                     /locus_tag="VIQ50_03125"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY9359399.1"
                     /translation="MPPASANDAVGRARLMLVAVSLAWGLSWAAMKFALNEIPPFSMR
                     MGTSGLATIALLALAFMQRRTIRVRGAMVWAHLAVAGCLNIAGFTLFTAFAQITTATS
                     RVAILTYTMPIWAALLAYPVLGERLSVSRGMSLLLCTVGLAVLIYPLIGSSDLIGLVF
                     ALASAVSWAMGTVYLKWARIEADPIAVAIWQLIVGFLVTVAGVLIVEGSPHLWPVQPR
                     ALGGLVFSALFGSAFAYLLWFEIVRRLPATA"
     gene            1020..1580
                     /locus_tag="VIQ50_03130"
     CDS             1020..1580
                     /locus_tag="VIQ50_03130"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011470660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HEY9359400.1"
                     /translation="MAGEHAIVAGMAGRYATALFELAREQNALDRVKVDLDRFDALVA
                     EVADLARLLRSPVFSAEEQTRALSGVLDRAGIDGLAANVLKLLGTNRRLFAALDVARA
                     YRALVAQHKGEVTAEVTVAEQPSDAHLAAIKDALVAVTKKDVQMKVKVEPSIIGGLVV
                     KVGSRMVDSSLRTKLNAIKVAMKEAR"
     gene            1580..3109
                     /gene="atpA"
                     /locus_tag="VIQ50_03135"
     CDS             1580..3109
                     /gene="atpA"
                     /locus_tag="VIQ50_03135"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEY9359401.1"
                     /translation="MDIRPAEISAILKEQIKNFGQEAEVSEVGQVLSVGDGIARVYGL
                     DNVEAGEMVEFENGVRGMALNLEIDNVGIVIFGEDREIKEGQTVKRTRTIVDVPVGKG
                     LLGRVVDALGNPIDGKGPIEASERQRVDIKAPGIIPRKSVHEPMATGLKAIDALIPIG
                     RGQRELIIGDRQTGKTAIALDTILNQKALNATGDEKVKLYCVYVAVGQKRSTVVQFTK
                     VLEEHGALDYSIIVAATASDPAPMQYLAPFSGCTMGEYFRDRGMHAVIIYDDLSKQAV
                     SYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDDHKAGSLTALPIIETQANDV
                     SAYIPTNVISITDGQIFLETDLFYQGIRPAVNVGLSVSRVGSAAQTKAMKKVAGRIKG
                     ELAQYREMAAFAQFGSDLDATTQRLLNRGARLTELLKQPQFSPLKMEEQAVVIYAGVH
                     GYLDPLPVERVRAFEEGLLGLMRTQHADILTAIRDSRDLDDATAAKLKAAVDDYAKSF
                     A"
     gene            3225..4094
                     /locus_tag="VIQ50_03140"
     CDS             3225..4094
                     /locus_tag="VIQ50_03140"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HEY9359402.1"
                     /translation="MPSLKDMRVRIAATKATQKITKAMQMVAASKLRRAQAAAEAARP
                     YARQMAKVLGHIAGGVGDLGSAPRLLVGTGSDRVHLLLVCTAERGLCGPFNSAIVRLA
                     RERANALMAEGKEVKFFCVGRKGYEQLRRLYERQIIERVELRAVRTLGFENAEGIGDK
                     ILRLYEQGAFDVCTLFFSRFKSIIAQTPTAQQIIPPVFEGDAGNGIVYEYEPDEDEIL
                     LELLPRNISVQIFAALLENAASFYGAQMTAMDNATRNAGEMIRKQTLTYNRTRQAMIT
                     KELIEIISGAEAV"
     gene            4139..>5020
                     /gene="atpD"
                     /locus_tag="VIQ50_03145"
     CDS             4139..>5020
                     /gene="atpD"
                     /locus_tag="VIQ50_03145"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013950322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEY9359403.1"
                     /translation="MANPVGHVTQVIGAVVDVHFETQLPPILNALETKNQDHRLVLEV
                     AQHLGESTVRTIAMDTTEGLVRGQEVTDTGQPIAVPVGDGTLGRIINVIGDPVDEAGP
                     VPHDEERPIHQPAPAFTEQSTESEILITGIKVVDLLAPYAKGGKVGLFGGAGVGKTVI
                     IMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKDPKKNNGSTAGSKCAL
                     VYGQMNEPPGARARVGLTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIP
                     SAVGYQPTLATDMGALQE"
BASE COUNT          989 a         1632 c         1598 g          801 t
ORIGIN      
        1 ggcggtggcc ggcaggcggc gcacgatctc gaaccaaagc agataggcga aggcggagcc
       61 gaacagcgcg gagaacacca gccccccaag cgcgcgcggc tgaacgggcc acaggtgcgg
      121 cgagccttcg acgatcaaca cgccggcgac ggtcacgaga aatccgacga tgagttgcca
      181 tattgcgact gcgatcggat cggcctcgat acgcgcccat ttcaagtaca ccgtgcccat
      241 cgcccagctc accgccgacg ccagggcgaa aacgaggccg atcagatcgc tcgatccgat
      301 caatggatag atcagcaccg ccagtccgac ggtgcagagc agaagcgaca tgccgcgcga
      361 gacgctcagc cgctcgccga gcacggggta cgccaacagc gcggcccaga tcggcatcgt
      421 gtaagtgaga atcgccaccc gcgacgtcgc ggtcgtgatt tgcgcgaacg cggtaaacag
      481 cgtaaagcca gcgatgttca ggcaaccggc gacggcgaga tgcgcccata ccatggcgcc
      541 gcgcacgcgg atggtgcggc gctgcatgaa tgcgagcgcg agcaacgcga tggtcgcgag
      601 gccagacgtg cccatccgca tgctaaacgg cgggatctcg ttgagcgcga acttcatcgc
      661 cgcccagctc aacccccagg ccaagctcac cgcgaccagc atgaggcggg cccggccgac
      721 ggcgtcgttc gcggaggcgg gtggcacgtt gcagggttcc gggagccgga gcgggggcga
      781 gaacattggt gtagcaccgg cgccgtctgc ctgcgcaagc cggccggccg cgaaagcgtc
      841 gcccgcgtcg tcatgttgca ccgcaggtag cggtgtgtta cgcaaccgcg cgattttcgc
      901 ggggtttcgg ggcgcgcctg cgctttcctg cgaagttgca aagttcaatg aatttcaagg
      961 gcttggtgcc aaccgtccgc gacggtgccg agccctcgga attgccggaa gagcatcttg
     1021 tggcagggga acatgcaatc gttgccggca tggcgggtcg ctacgcgacc gcgcttttcg
     1081 agctcgcgcg cgaacaaaac gccctcgatc gcgtcaaagt cgatctcgat cgcttcgatg
     1141 cgctcgtggc cgaggtcgcc gatttggccc gcctgctgcg tagccccgta ttttccgccg
     1201 aggagcagac gcgcgcgctc tcgggcgtgc tcgaccgggc cggcatcgac gggctcgctg
     1261 ccaatgttct caaactgctc ggcacgaacc ggcgcctttt cgccgcgctc gacgtggcgc
     1321 gcgcctaccg ggcgctggtc gcccaacaca agggcgaagt gacggcagag gtgacggtgg
     1381 cggagcagcc gagcgacgcg catcttgctg cgatcaagga tgcgctcgtg gccgtgacca
     1441 agaaggacgt gcagatgaag gtcaaggtcg agccgtcgat catcggcggc ctcgtggtca
     1501 aggtcggctc gcgcatggtc gacagctcgc tgcgcaccaa gctcaatgcg atcaaggtgg
     1561 cgatgaaaga ggcccgctga tggatattcg cccggccgaa atttcggcaa ttctgaaaga
     1621 gcagatcaag aatttcggcc aggaggcgga ggtctccgag gtcggccagg ttctctcggt
     1681 cggcgacggc atcgctcgag tctacggatt ggacaacgtc gaagccggcg aaatggtcga
     1741 gttcgagaac ggcgtccgcg ggatggcgct taacctcgag atcgataatg tcggcatcgt
     1801 gatcttcggc gaggaccgtg agatcaagga agggcagacg gtcaaacgca cgcgcaccat
     1861 cgtcgacgtt ccggtcggca agggcttgct cggacgcgtg gtcgacgccc tgggcaaccc
     1921 gatcgacggc aagggtccga tcgaagcgag cgagcgccaa cgcgtcgaca tcaaggcgcc
     1981 cggcatcatc ccccgcaaat cggtgcatga gcccatggcg accgggctca aggccattga
     2041 cgcgcttatt cccatcggcc gcggccaacg cgagctgatc atcggcgacc gccagaccgg
     2101 caagactgcg atcgcactcg acacgatcct caatcagaag gcgctcaacg cgaccggcga
     2161 cgagaaggtc aagctttatt gcgtctatgt ggccgtcggc cagaagcgct cgaccgtcgt
     2221 gcaattcacc aaggtgctgg aggagcacgg cgcgctcgac tattcgatca tcgttgcggc
     2281 gactgcctcc gatccggcgc cgatgcagta cctcgccccg ttctccggct gcaccatggg
     2341 cgaatatttc cgcgaccgtg gcatgcatgc ggtgatcatc tacgacgact tgtcgaagca
     2401 ggccgtctcg tatcggcaga tgtcgctgct gttgcggcgt ccgccaggac gcgaggccta
     2461 tcccggcgac gtgttctatc tgcactcgcg cctgctcgag cgggccgcca agatgaacga
     2521 tgaccacaag gcaggctcgc tcacggcgct tcccatcatc gagacgcagg cgaatgacgt
     2581 atccgcctac atcccgacca acgtcatctc gatcaccgac gggcagatct tcctcgagac
     2641 cgatttgttc tatcagggca tccgcccggc ggtgaacgtc ggcctctcgg tgtcgcgcgt
     2701 cggctccgcc gcccaaacca aggcgatgaa gaaggtcgcc gggcgcatca aaggcgagct
     2761 cgcgcaatac cgggaaatgg cggcattcgc gcagttcggc tccgacctcg atgccaccac
     2821 gcaacgcctg ctcaaccgcg gcgcgcggct caccgaactg ctcaagcagc cgcagttttc
     2881 cccgctcaag atggaggagc aggccgtcgt catctatgcc ggggtccacg gctatctcga
     2941 tccgcttccg gtcgagcggg tgcgcgcctt cgaagagggc ctgctggggc tcatgcgcac
     3001 gcagcacgcg gacatcctca ccgcaatccg cgacagccgc gatctcgacg atgccaccgc
     3061 cgccaagctc aaagccgcgg tcgacgacta cgcgaagagc ttcgcatgag cacaaaagcg
     3121 aagacggagg acagacgaca gatgctcgac ggccgatgat cggcgcctga ggcgaagctc
     3181 gcttcctggt cctccgccgt cctttacctg tcatccgact taagatgccc agcctcaaag
     3241 atatgcgcgt gcgcatcgcc gccaccaagg cgacgcagaa gatcacaaag gccatgcaga
     3301 tggtcgcggc atcgaagctg cgtcgcgcgc aggccgcggc cgaggccgcc cgtccctatg
     3361 cccgccaaat ggcgaaggtg ctcggccata tcgccggcgg tgtcggcgat cttggctcgg
     3421 cgccgcggct gctggtcgga accggcagcg accgcgtgca ccttctgctg gtatgcaccg
     3481 ccgagcgcgg cttatgtggc ccgttcaatt cggcgatcgt ccgcctcgcg cgcgagcggg
     3541 caaatgcgct gatggccgaa ggcaaggagg tgaaattctt ctgcgtcggc cgcaagggct
     3601 acgagcagct tcgccgactc tacgagaggc agattatcga gcgcgtcgaa ctgcgcgccg
     3661 tgcgcacgct cggcttcgaa aacgccgagg gcatcggcga caagatcctg cgcctctacg
     3721 aacagggtgc gttcgacgtc tgcaccctgt tcttttcgcg gttcaagtcg atcatcgcgc
     3781 aaaccccgac ggcgcaacag atcatcccgc ccgtcttcga gggcgacgcc ggcaacggca
     3841 tcgtgtacga atacgagccc gatgaggacg aaatcctcct cgaactactg ccgcgcaaca
     3901 tttcggtgca gattttcgcc gcgctgctcg agaatgccgc ctctttctac ggcgcgcaga
     3961 tgaccgcaat ggacaatgcc acgcgcaacg ccggcgaaat gattcgcaaa cagacgctga
     4021 cctacaaccg cacccgtcag gcgatgatca ccaaagagct gatcgagatc atctccggtg
     4081 cggaagcggt atgaaggcag agcaactctt aatctcggtg caataacaag gaccatccat
     4141 ggccaatcca gtcgggcacg tcacccaggt catcggcgcc gtcgtcgacg tgcatttcga
     4201 gacgcagctt ccgccgatcc tcaacgcact cgagacgaag aatcaggacc atcgcctggt
     4261 gctcgaagtc gcccagcatc tcggcgagtc gaccgtgcgc accatcgcca tggatacgac
     4321 ggaagggctc gtgcgggggc aggaggtgac cgataccggt caaccgatcg cggtgccggt
     4381 cggcgatggc acgctgggcc gtatcatcaa cgtgatcggc gatccggtcg acgaggccgg
     4441 tccggtcccg cacgatgagg agcggccgat ccatcagccg gcgcctgcct tcaccgagca
     4501 atcgaccgaa tcggagattc tcatcaccgg catcaaggtg gtggatctgc tcgcccccta
     4561 cgccaagggc ggcaaggtcg gcctgttcgg cggcgccggc gtcggcaaga ccgtcatcat
     4621 catggaactg atcaacaacg tcgccaaggc gcacggcggc tattccgtgt tcgccggcgt
     4681 cggtgagcgc acccgcgaag gcaacgatct ctatcacgag atgatcgagt cgggcgtcaa
     4741 caaggacccg aagaagaaca acggttcgac cgccggctcg aaatgcgcgc tggtgtacgg
     4801 acagatgaac gagccgccgg gcgcgcgtgc ccgcgtcggc ctcaccggtc tcacggtcgc
     4861 cgagcacttc cgcgaccagg gccaggacgt gctgttcttc gtcgacaaca tcttccgctt
     4921 cacccaagcg ggctcggagg tgtcagcgct gctcggccgc attccctcgg ccgtgggcta
     4981 tcagccgacg ctcgcgaccg acatgggcgc gcttcaggag
//
LOCUS       DATCWM010000169         5061 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_422507, whole genome shotgun sequence.
ACCESSION   DATCWM010000169 DATCWM010000000
VERSION     DATCWM010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5061
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_422507"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..406
                     /locus_tag="VIQ50_03150"
     CDS             <1..406
                     /locus_tag="VIQ50_03150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY9359404.1"
                     /translation="ELELAADLPMLRLDAVLFEQALFNLLDNAAKYSPSHTTIRIQSW
                     RDRDSVCLQILDEGNGIPPAELEHIFDKFYRAEKGDQVRAGTGLGLAISRGFIEAMHG
                     TITAANRIDRSGAAFAIRFPISPATEQLDTAA"
     gene            403..1104
                     /locus_tag="VIQ50_03155"
     CDS             403..1104
                     /locus_tag="VIQ50_03155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008133403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY9359405.1"
                     /translation="MSAAPLKILVVDDEPPIRKLLRMGLSTQGYEILEAPTGKASLDL
                     LARNPDLIILDLGLPDIEGLELLRMIRARNEGVPIVVLSSRGDEVGKVQALDLGADDY
                     ITKPFGMDELLARMRTALRHQLQVHGERPIFRTGDLAVDLVRRIVKVGDKEVKLSPKE
                     YDLLRVLVQHAGKVLTHRFLLGELWDGLTDAQYLRVYVRQLRQKIEADPERPQYVLTE
                     TGIGYRLRAPEQELH"
     gene            1138..1581
                     /locus_tag="VIQ50_03160"
     CDS             1138..1581
                     /locus_tag="VIQ50_03160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEY9359406.1"
                     /translation="MGISAFLSPSDTLINIRASDKARLLQELSRRAAASLDLPPERIA
                     AEILKREELGSTGTGGGVAIPHARIQGLNKSFGILARLNRAIDFAAIDGRPVDLVFLL
                     LLPANPVGEQLKALASVARKFRDPACLRDLRAARTSGSLYDAMIA"
     gene            complement(1876..3093)
                     /locus_tag="VIQ50_03165"
     CDS             complement(1876..3093)
                     /locus_tag="VIQ50_03165"
                     /inference="COORDINATES: protein motif:HMM:NF037955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9359407.1"
                     /translation="MAVEHRALLQFVLLYCALFSAFGFASPFFPAFLAGRGLGSEELG
                     LVLGAGTVVRLICGPVAGRVADRLQAFRAELAVFAIVAAGAALLYLALDGFWAVLAIS
                     LLQAAALGPLVPLADALCLAHARPRQSTGFEYGWVRGMGSAAFVVGTLLAGRAVEGYG
                     LSSIMWLSATALLALPFAAAVVPAFPGTAGGAPAPHARLDHPWLTLFRQRAFARITLI
                     GALVLGSHAMYDSFAVIRWREAGISPATIGLLWSESVAAEVLVFLSIGMTILRVLKPT
                     GALACAAACGLLRWATMAETTEVAALALIQPLHGFTFALLHLASMRLITDTVPSALAG
                     TAQAVYGLVGVGGATAVLMIVSGWFMPISARPDFGRWLYCALLPSLSFGACIRSRIGK
                     GEQRESLAPAALT"
     gene            complement(3378..4361)
                     /locus_tag="VIQ50_03170"
     CDS             complement(3378..4361)
                     /locus_tag="VIQ50_03170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9359408.1"
                     /translation="MKIMGLRAALIAIAATIGFAGADALHAQGYPARPVTLIVPSAAG
                     GGTDTIARLIGDQLTKQLGQGFVVENRTGGGMLVGTAAAAKAAPDGYTLLVGLTGNMS
                     VNPSLFANLPYDPLADFTPVGMLANYPFLVVVNNDLPAKSIKELIALLKSQPGKFDYA
                     SAGNGTGQHLAPELFKMMTGTEMGHVPYRGAQPAYQDVISGRVPVFFDNMSTAMSLAQ
                     GGKVRALAVTSKKRSSLMPELPTVDEAGVPGYEYYTWFGLWAPKGTPQPIVEKLHAEV
                     QKALADPTVQQRIADTAGEPAHMALAEIDPFVKAEIAKWAEVVKRAGIKVE"
     gene            4665..5036
                     /locus_tag="VIQ50_03175"
     CDS             4665..5036
                     /locus_tag="VIQ50_03175"
                     /inference="COORDINATES: protein motif:HMM:NF022610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2946 family protein"
                     /protein_id="HEY9359409.1"
                     /translation="MSFFRSRSRWGSYLALFALAFQLAVSFAHVHLDHVSPVPAGARA
                     QLAGEQASAPSSRSDHEDLADDLCPICSLIHLAGTLVPAEMPPVPLPQIFGGLRLKAA
                     VAIDVSASHRVVFQARAPPIV"
BASE COUNT          986 a         1624 c         1561 g          890 t
ORIGIN      
        1 cgagctggag ctcgccgccg atctgccgat gctccgcctc gatgcggtcc tgttcgagca
       61 ggccttgttc aacttgctgg acaacgccgc caaatattcc cccagtcaca cgacgatccg
      121 catccagagc tggcgcgacc gtgattccgt ctgcctgcaa atcttggatg aaggcaacgg
      181 tattccgccg gcggagctcg agcacatctt cgacaagttc tatcgagcgg aaaaaggcga
      241 tcaggtccgc gccggcaccg gtctcggact ggcgatctcc cgcggcttca tcgaagccat
      301 gcacgggacc atcaccgcgg cgaaccgcat cgatcgcagc ggcgcggcgt tcgcgatcag
      361 atttccaatc tcgcccgcca ccgagcagct ggacaccgcg gcatgagtgc tgccccgctc
      421 aaaattctcg tggtcgacga cgagccgccc atccgcaagc tcttgcgcat gggactgagc
      481 acgcaaggct acgaaatcct agaagcgcca accggcaagg cctcgctcga tctgctggcg
      541 cgcaatccgg atttgatcat tctcgatctc gggcttcccg acatcgaggg actcgagttg
      601 ctgcgcatga tccgcgcgcg caacgagggt gtcccgatcg tggtgctgtc gagccgcggc
      661 gacgaggtcg gcaaggtgca ggcgctcgac ctcggggccg acgactacat caccaagccg
      721 ttcggcatgg acgagctgct cgcccgcatg cgcaccgccc tgcgccacca gctgcaggtg
      781 cacggcgagc ggccgatttt ccgcaccggc gatctcgcag tcgacctggt gcgacgcatc
      841 gtcaaggttg gcgacaaaga ggtgaaactg tctcccaagg agtacgacct cctgcgtgtg
      901 ctggtgcagc acgccggcaa ggtgctgacg cacaggttcc tgctcggtga gctatgggac
      961 ggcctcacgg acgcgcagta cctccgggtc tatgtgcggc agctgcggca gaagattgag
     1021 gccgatcccg agcggccgca atacgtactg acggaaaccg ggatcggcta ccggctgcgg
     1081 gcgcccgagc aagagctgca ttgagcgcgc ttggcgttag ctacgaccgg agcggccatg
     1141 ggcatcagcg catttctctc gccgagcgat actctcatca acatacgcgc gtccgacaag
     1201 gctcgcttgt tgcaggagtt gtcccgtcgc gcggctgcca gcctcgattt gcctcccgag
     1261 cggattgccg cggagatact caaacgcgag gaattgggat cgaccggcac cggcggcggt
     1321 gtggcgattc cgcatgcgcg cattcaaggg ctgaacaaat ctttcggcat cttggcccgc
     1381 ttgaatagag cgatcgattt cgccgcgatc gacggccggc cggtcgatct cgtattcctg
     1441 ctcctgctcc ccgccaatcc ggttggggag cagctcaagg cactcgcctc ggttgcgcgc
     1501 aagttcagag atcccgcatg tttgcgcgac ctgcgcgccg cccgcaccag cggcagtctt
     1561 tacgacgcaa tgatcgcgta gcaaggaggc tccaaacctg tgagcgactt gaggtgaatc
     1621 gctacatacc gccccgcatt tgatcgctcg ccggcgacca ggattgatcg cctggccttg
     1681 tcgatcttgg tcactgtgat ctgtccgttg atccgataag ccgccctgca gcccatgcag
     1741 cttccaggta ttgagtatct cttccacttc gtcgagcgtg agtccttcgt gccggagggc
     1801 tttggcacat cgacatctcg acatagcgtg taccgcgagc cctgattttc gagacgaaaa
     1861 aaaacagcct cgatgtcagg taagggcggc aggggcaaga ctctcacgtt gctcgccctt
     1921 gccgatacgt gagcgaatgc aagctccaaa tgacagggaa ggcagcaacg cacagtagag
     1981 ccatcgccca aaatccggcc gcgccgaaat gggcataaac catcccgaaa cgatcatcaa
     2041 aacagctgtg gcgccgccaa cgccgaccag cccgtagact gcctgtgcgg ttcccgccaa
     2101 agcggaaggc acggtgtcgg tgatgagccg catggacgcg aggtgcagca acgcgaaggt
     2161 gaaaccgtgc agcggctgga tcaatgcaag ggcggcgact tcagttgttt cggccatagt
     2221 cgcccagcgc aggagaccgc aagctgccgc gcatgccaac gcgccggtcg gcttcagcac
     2281 cctcaagata gtcatgccga tcgatagaaa gaccaatact tcggcggcaa ccgactccga
     2341 ccaaagcagc ccaatggtcg cggggctaat accggcttcc ctccaacgga tcacggcgaa
     2401 ggagtcgtac atcgcatgac tgccgagaac gagcgcgccg atgagagtga tccgggcaaa
     2461 tgctcgctgg cgaaataacg tcagccaggg atgatccagg cgcgcgtggg gagcgggcgc
     2521 accccctgct gttccgggga aggccgggac gactgccgcg gcaaacggaa gcgccagcag
     2581 cgccgtcgcg ctcagccaca tgatggatga gaggccgtaa ccttccaccg cgcgcccggc
     2641 caggagcgtg ccgacgacga acgcagccga acccatgccc cgcacccatc catattcaaa
     2701 tcctgtgctt tgtcggggtc gagcatgcgc gaggcaaagg gcgtcggcga gcggaacgag
     2761 cgggccgagc gccgccgcct gcagcaggga aatggccagc accgcccaaa acccatccag
     2821 tgcgaggtaa aggagcgcgg cgcctgcggc cacaatggcg aaaacagcaa gttctgctcg
     2881 aaaggcctgg agacgatccg ctacacgccc ggcaacgggg ccgcatatca gtcgcactac
     2941 ggttcccgca cctagcacga gcccgagttc ctcggacccg agcccgcgtc ccgcaagaaa
     3001 ggcggggaag aacggcgagg caaacccgaa cgcgctgaaa agcgcgcagt agagcagtac
     3061 aaattgaagc agcgcacggt gctcgacggc cacaggattg ctcgcgtttg tgagtcccgg
     3121 ctggaagttt gcgctcagat caaagaagca cctcggggga tgaacgccgc aacggccgca
     3181 ttcccgcggg cggaactcat tctgggcaaa ccggttggct gaaattatgc tggcctcatt
     3241 cgaagcccgc agtattcaat atcggcagac gcagccgcga caaccatgtc cgaaacggca
     3301 gctgccgtcc aaacctcgac aggtcttact cctcggaaac tcgtcgattc ggcggaggcc
     3361 gttaagttgg gcgcgcccta ttcgaccttt attccggcgc gcttgaccac ctcggcccat
     3421 ttggcgatct ctgctttcac aaacgggtcg atctccgcaa gcgccatgtg ggccggctcg
     3481 cctgcggtgt cggcgatgcg ctgctggacg gtcggatcgg cgagcgcctt ctgcacttcg
     3541 gcgtgcagtt tttcgacaat cggctgcggc gtacccttgg gcgcccacaa tccaaaccac
     3601 gtgtagtatt cgtagccggg cacgccggcc tcgtcgacgg tcggcaactc aggcatcagc
     3661 gacgatcgct tcttggaggt gacggcaagg gcgcgcacct tgccgccctg cgcaaggctc
     3721 atcgctgtcg acatgttgtc aaagaatacc ggcacgcggc ctgagatcac gtcctgatac
     3781 gcgggctgcg caccccggta gggaacgtgc cccatctcgg tgccggtcat catcttgaac
     3841 agttcggggg ccaggtgctg tccagtgcca ttcccggccg aggcgtagtc gaacttgccg
     3901 ggctgcgatt tcagcagagc gattagctcc ttgatcgact tcgccggcag atcgttattc
     3961 acgacgacaa ggaacggata gttggcaagc atccccaccg gcgtgaagtc cgcgagcgga
     4021 tcgtacggca gattggcgaa caagctggga ttgaccgaca tgttgccggt gagcccgacc
     4081 agcagcgtgt agccgtccgg cgcggccttg gccgcggccg cagtgccgac cagcatgccg
     4141 cccccggtcc gattttcgac cacgaatccc tggccgagct gcttggtaag ctgatccccg
     4201 atcaggcgcg caatggtatc ggtcccgccg ccggcagcgg acgggacgat gagtgtcact
     4261 ggccgggccg gataaccttg ggcatgcagc gcgtcagccc cggcaaagcc gatagtggcc
     4321 gcaatggcaa tgagcgctgc gcgcaatccc atgatcttca tggatctcct cccgaggctt
     4381 tttcgtagga tagcattcgc gcaagctttt cgcccgttgc cgcgcgcagc gaaaatgcgg
     4441 gaaagcctcg caatgccgcc acggatttcg ctgcgttcaa tacggacgac acggcgccaa
     4501 tccgcactgt cgctctgcgg cttgcagccc cgagtgttga gtttctgcaa caggcgagcg
     4561 gaatcgcgaa tctggcccaa ttgtgggcaa tgttacagtg ttacttttct cgcggacgac
     4621 ggcggaatgg ttctgccggc gcgataggcg cgaagctgac agcgatgagc ttcttccgat
     4681 cgagatcgag gtgggggtcg tatctggcgc tgttcgcgct cgcgttccag ctcgcggtgt
     4741 cgttcgcgca cgtgcatctc gaccacgtta gccccgttcc agcgggggcg cgcgcgcaac
     4801 tggcgggcga gcaggccagc gcgccttcca gtcgttccga tcatgaagac cttgcggacg
     4861 atctctgccc gatctgcagc ctgatccatc tcgccggcac attggtaccg gccgagatgc
     4921 cgcctgtgcc gttgccgcag attttcggcg gcttgcgact caaggccgcc gtcgccatcg
     4981 acgtgtcggc atcgcaccgc gtcgtcttcc aagcacgcgc gcctcccatc gtctgacatc
     5041 gatccggcga gcggcctcgc a
//
LOCUS       DATCWM010000170         6288 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_346971, whole genome shotgun sequence.
ACCESSION   DATCWM010000170 DATCWM010000000
VERSION     DATCWM010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6288)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6288)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6288
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_346971"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1631)
                     /locus_tag="VIQ50_03180"
     CDS             complement(<1..1631)
                     /locus_tag="VIQ50_03180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HEY9359410.1"
                     /translation="MSTDSVATSHENRLAHETSPYLLQHKHNPVDWWPWGTEALAAAK
                     RENKPILLSVGYAACHWCHVMAHESFEDAETAKVMNDLFVNIKVDREERPDIDQIYMA
                     ALHHLGEHGGWPLTMFLTPDGEPFWGGTYFPKTARYGKPAFVDLLREVERVFRQEPQS
                     VEQNRSALMARLAESARPTGRVTIAATDLDRAADQLARMIDPVNGGMRGAPKFPQAMM
                     LEFLWRAGERTNTARYCAAVELTLGRICEGGIYDHLGGGFSRYSVDERWLVPHFEKML
                     YDNALLLELLALAYLRSGNELFHRRARETVTWLRREMTTQEGAFCASLDADSEGEEGK
                     FYVWSLDEATAALGQEDAAFFAAHYGVTAEGNFEGHNILNRLKHVPRSAEDEQRLAAL
                     REKLLSVRDQRVRPGRDDKVLADWNGLMIAALVNAGLAFGEPVWLEMAARAFLFIDAE
                     MSHGDRLGHSWRTGKLVVPGLASDHAAMIRAALALHEATGEHAYLERALDWQATLDRR
                     YANPDNGGYFLTADDAEGLVVRPSATTDEATPNPNA"
     gene            1769..3136
                     /gene="mnmE"
                     /locus_tag="VIQ50_03185"
     CDS             1769..3136
                     /gene="mnmE"
                     /locus_tag="VIQ50_03185"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HEY9359411.1"
                     /translation="MTSDRDTIFALSSGRPPAAIAVVRVSGPRARGALEQLIGRVPQP
                     RRASLARLRDPATGDVVDEGLALWLPAPNSETGEDMAELHVHGGRAVIAAVLAALAKL
                     DGLRPAEAGEFTRRAFENGRMDLTAVEGLADLVAAETEAQRRQAYQHLKGLLGERAET
                     WRQRLIEALALVEAGIDFSDEEDVPKDMMARSLELIRPLAEEISQAGTGQGERLREGL
                     RVAIAGPPNAGKSTLFNRLARREAAIVSPFPGTTRDVLELHLDLGGYPVTMLDTAGIR
                     ETNDPVEREGVRRASERAAGADLVLWVLDATQVPRRDLPAHGGISLAPNAAAWLVVNK
                     IDLVSEAERRRIESEFDKKENVNLISSATGAGVDGLVHGIAGFADRFFTPEPALVTRE
                     RQRAHLRETVTALRDAQRAAEEGREEIMAEQLRLATRALGKLLGRVDVEDVLDVIFRD
                     FCIGK"
     gene            3294..5174
                     /gene="mnmG"
                     /locus_tag="VIQ50_03190"
     CDS             3294..5174
                     /gene="mnmG"
                     /locus_tag="VIQ50_03190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0002098 - tRNA wobble uridine modification
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HEY9359412.1"
                     /translation="MDSHFDVIVVGGGHAGCEAAAAAARFGAKTALVTHRFATIGAMS
                     CNPAIGGLGKGHLVREIDALDGLMGRVADLGGIQFRVLNRRKGPAVRGPRAQADRRLY
                     AGAMQRAISAIENLVVIEAAADDLIIRSERIAGLKLADGRELGAGAVVLTTGTFLRGL
                     IHIGERQTPAGRVGEAPAVGLSLTLERLGFSLGRLKTGTPPRLDGRTINWAAVDMQPG
                     DEPPEPFSTLTERIENPQVECGITRTTAATHRIIRDNVHRSPMYSGQILSKGPRYCPS
                     IEDKIVRFGERDGHQIFLEPEGLDDARVYPNGISTSLPEEVQAALIATIPGLENARVI
                     RPGYAIEYDHVDPRELRPTLETKRLPGLFLAGQINGTTGYEEAAAQGLVAGLNAAARA
                     GGGGPVTFDRAEAYLAVMIDDLVTRGVTEPYRMFTSRAEYRLTLRADNADQRLTGRGI
                     AIGCVGATRRRQHDAKMMSLAAARDFARSVSLTPSEADRCGLALNKDGQRRSAFELLS
                     HPHIGIADLAKVWPRFCEVPAKTAEQLEIDAKYDVYLSRQAADIAAYRRDEALELPES
                     LDYLQLPGLSIEVRQKLHSARPRTIGQAARMDGVTPAALTLLAAHLRRKGRPSKTAAA
                     GS"
     gene            5282..5917
                     /gene="rsmG"
                     /locus_tag="VIQ50_03195"
     CDS             5282..5917
                     /gene="rsmG"
                     /locus_tag="VIQ50_03195"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA];
                     GO_process: GO:0046118 - 7-methylguanosine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HEY9359413.1"
                     /translation="MALTPVSRETLERLERFVALLLAWQRRTNLIAPSTVPLLWTRHI
                     ADSLQLLELAPNAREWIDLGSGGGFPGLVIASALAGTPGARVHLIESHGKKAAFLREA
                     QRLTATPASVHAMRIEEFVTTYDGPVDVITARAVAPLKSLFHQTFPLLGKSGAIALFP
                     KGQHAELELREACESPAVQAWGMDATLVGSRTDPAGRIVVIRNVERCGTTP"
     gene            5969..>6288
                     /locus_tag="VIQ50_03200"
     CDS             5969..>6288
                     /locus_tag="VIQ50_03200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007563442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY9359414.1"
                     /translation="MTDHADSPPQSVPEAAQVVALASRIPNPAPPRVIAIANQKGGVG
                     KTTTAINLGTALAAIGEQVLIVDLDPQGNASTGLGIDRRNRSCSTYDVLIGEAPMRAA
                     VVATA"
BASE COUNT         1107 a         2003 c         2073 g         1105 t
ORIGIN      
        1 gcgttgggat tgggcgtcgc ctcgtcggtg gtggcgctgg gccgcaccac cagaccctcg
       61 gcgtcgtcgg cggtgaggaa atagccgccg ttgtcgggat tggcgtaacg ccggtcgagc
      121 gtcgcctgcc agtcgagcgc gcgttcgagg taagcgtgtt cgcccgttgc ctcgtgaagc
      181 gccagcgccg cccggatcat ggcggcatga tcggaggcga gcccgggcac gacgagcttg
      241 cctgtgcgcc aggaatggcc gaggcgatcg ccgtggctca tctcggcatc gataaacaga
      301 aacgcgcgtg ctgccatctc gagccagacc ggctcaccga atgcgaggcc ggcgttgacg
      361 agcgcggcaa tcatcaggcc gttccaatcc gccagcacct tgtcatcgcg gcccggccgc
      421 acccgctggt cgcgtacgct cagcagtttt tcgcgtagcg ccgcgagcct ttgctcgtct
      481 tccgcgctgc gcgggacatg tttgaggcgg ttgagaatgt tgtgaccttc aaaattgcct
      541 tcggcggtca cgccatagtg tgcggcaaaa aaggcggcgt cctcctgacc caacgccgcg
      601 gtcgcctcgt ccagcgacca gacatagaat ttgccctctt cgccttcgga gtcggcgtcg
      661 agtgaggcgc aaaatgcgcc ctcctgcgtc gtcatttcgc ggcgaagcca agtcaccgtc
      721 tcgcgtgcgc ggcggtggaa gagctcgttg ccggagcgca gataggcaag cgcgagcaac
      781 tccagcagca gcgcattgtc gtacagcatc ttttcgaaat gcggcaccag ccagcgctcg
      841 tcgaccgaat agcgggagaa cccgccgccg agatgatcat agatgccgcc ctcgcagatg
      901 cgcccaagcg tgagctccac ggcggcgcaa taacgagcgg tgttcgtgcg ctctcccgcg
      961 cgccacaaaa actcgagcat catcgcctgc gggaattttg gcgcgccgcg catgccaccg
     1021 ttgacggggt cgatcatgcg agcaagctga tcggcagcac ggtcgaggtc ggttgcggca
     1081 atggtcacgc gtcccgtggg gcgcgcgctc tccgccagcc gtgccatcag cgcgctgcgg
     1141 ttctgctcga cgctttgcgg ctcctgccgg aacacccgct cgacctcgcg caggagatcg
     1201 acgaaggcgg gctttccata acgcgcggtc ttgggaaaat aagtgccgcc ccagaacggc
     1261 tcgccgtcgg gcgtgaggaa catcgtgagc ggccaaccgc cgtgctcacc gagatgatgc
     1321 agcgccgcca tgtagatctg gtcgatgtcg ggacgttcct cgcggtccac tttgatgttg
     1381 acgaagagat cgttcatgac tttggcggtc tcggcgtcct cgaagctctc gtgcgccatg
     1441 acatgacacc aatggcaggc ggcataaccg accgagagca gtatcggttt gttttcgcgt
     1501 tttgccgcgg ccagcgcttc ggttccccac ggccaccaat cgaccgggtt atgcttgtgt
     1561 tgcagcagat aagggctcgt ttcgtgcgcg agccggttct cgtgggatgt ggcgacggaa
     1621 tcggtggaca tctgaggata atgcccgcgg gtacggttgg ttcggcggac gatagcccgc
     1681 ggacgcacgg ttaaatgggt ttccgccgac gtataggtat ttcgctgcga tcttgccggc
     1741 aaattatgga ccgttcgagc acccgggaat gaccagcgac cgcgacacca tcttcgccct
     1801 ctcctccggg cggccgccgg cggcgatcgc agtcgttcgc gtttccggtc cgcgtgcgcg
     1861 cggggcgctc gaacagctga tcggccgcgt gccccagccg cggcgcgcct cgctcgcacg
     1921 gcttcgcgat cccgcaaccg gcgacgtcgt cgatgagggg cttgcgctgt ggttgcccgc
     1981 cccgaacagc gaaaccggtg aagacatggc ggagctgcac gtgcacggcg gccgcgccgt
     2041 catcgcggcc gttctcgcgg cgttggcaaa gctcgacgga ttgcgtcccg cggaagcagg
     2101 agagttcacg cgccgcgcct tcgagaatgg gcgcatggat ttgaccgcgg ttgaaggcct
     2161 cgccgatctc gtcgcagccg aaaccgaggc acaacggcgc caggcgtatc agcacctcaa
     2221 gggtctgctt ggcgagcgcg ccgagacctg gcggcagcgc ctgatcgaag cgttagccct
     2281 ggtcgaagca gggatcgatt tttccgacga ggaggatgtc ccaaaggaca tgatggcgcg
     2341 gtcgcttgag ctcattcggc cgctggccga ggaaatcagt caggcgggca caggtcaggg
     2401 cgaaaggctg cgcgaggggc tgcgcgtcgc cattgcgggg ccgccgaacg cgggcaagtc
     2461 gaccctgttc aatcggctcg cccggcgcga ggctgcgatc gtatcgccgt ttccgggcac
     2521 aacgcgcgac gtgctcgaac tccatctcga tctcggcggc tatcccgtga ccatgctcga
     2581 taccgcggga attcgcgaga cgaacgaccc ggtcgaacgc gaaggggtgc gacgtgcaag
     2641 tgagcgggcc gcgggcgcgg atctggtgct ttgggttctc gacgcgacgc aagtgccgcg
     2701 gcgagatctc ccggcgcacg gagggatctc attggcacca aatgccgcgg cttggctcgt
     2761 ggttaacaaa atcgatctcg tatctgaagc cgaaaggcga agaattgaat ccgaattcga
     2821 taaaaaagaa aacgttaacc ttatttccag cgcgaccggg gccggcgtgg atgggttggt
     2881 ccacgggatt gcaggatttg cggaccgctt ctttactccc gaacccgcct tggtcacccg
     2941 cgagcgccag cgggcgcact tgagggaaac cgtgacagcg ttgcgcgatg cgcagcgtgc
     3001 cgccgaagag gggcgtgagg aaatcatggc ggaacagctt cgcctggcca cccgggcctt
     3061 gggcaagctg cttggacgcg tcgatgtgga ggatgttctt gacgtgatct tccgcgattt
     3121 ctgcatcggc aaataaactg cgccgacagc aagaactctc ttattcgggc tgagacatcg
     3181 tcccccaacg tttcacgtga aacgtctctc ggtcgcgcgg atgttgcagg atggcgaaat
     3241 agacgatggc tctgcggtca gctagaagct cggcgtgcca aggcttgcaa cacatggata
     3301 gccacttcga tgtcattgtc gtgggcggag gacacgccgg ctgcgaagcg gcggcggccg
     3361 ccgcgcgctt tggcgccaag actgcgctcg tcacccatcg ctttgcgacc attggcgcaa
     3421 tgtcgtgcaa tcccgcaatc ggaggtctcg gcaaaggcca cctcgtgcgg gagatcgatg
     3481 cactcgacgg tctgatgggg cgcgtcgccg atctcggcgg catccagttc cgggttctca
     3541 accggcgcaa agggccggcg gtgcgggggc cgcgcgccca ggcggatcgc aggctctacg
     3601 ccggcgccat gcagcgggcg atctcggcga tagagaatct cgtcgtgatc gaggccgcag
     3661 cggacgatct catcattcgc agcgaacgga tcgccggact caagctcgcg gacgggcgcg
     3721 aacttggagc aggggccgtc gtgctcacga caggcacctt tttgcgcggt ctcatccata
     3781 ttggcgagcg acaaacgccc gctgggcgcg tcggcgaagc gccggcggtc gggctatcgc
     3841 tcacgttgga gcgcctcggt ttttcgctcg ggcggctcaa gaccggcacg ccgccacggc
     3901 tcgacggccg caccatcaat tgggcggcgg tggacatgca gcccggcgat gagccgccgg
     3961 agccgttttc caccttgacc gagcggattg agaatcccca ggtcgagtgc ggcatcaccc
     4021 ggacgaccgc tgcgacccac cggatcatcc gcgataacgt gcatcgctcg cccatgtatt
     4081 cgggtcagat tctcagcaaa ggcccgcgct attgcccgtc gatcgaggac aagatcgttc
     4141 gcttcggcga gcgcgacggc caccagatct ttctcgagcc ggaggggctg gacgatgcca
     4201 gggtctaccc gaatgggatc tcgacctcgt tgccggagga ggtccaagcc gcgctgattg
     4261 cgaccattcc gggcctcgag aacgcgcgtg tgatccggcc gggctacgcc atcgagtacg
     4321 accacgtcga cccgcgcgag ctgaggccga ccctggagac aaagcgcctg ccgggactgt
     4381 tcttggccgg gcaaatcaat ggcacgaccg gctacgagga ggctgccgcc caaggcctgg
     4441 tcgcgggcct taatgcggcc gcgcgagcgg gtggaggcgg accggtcacg ttcgatcgtg
     4501 cggaggccta tctggctgta atgattgacg atttggtcac gcgcggggtg accgaaccgt
     4561 accggatgtt tacctcgcgc gcggagtatc gcttgacgct acgcgccgac aacgcggacc
     4621 aacgcttgac cggccgaggc attgcgatcg gctgcgtcgg tgccacgcgt cgccgccagc
     4681 acgatgcaaa aatgatgtcc cttgccgcgg ctcgcgactt cgcgcgctcg gtgtcgctca
     4741 cccctagcga ggcggatcgc tgcgggcttg ccctcaacaa ggatggccag cggcgcagcg
     4801 ccttcgagct gctgtcgcac ccccacatcg ggatcgcgga cctcgcaaag gtctggcccc
     4861 ggttctgcga ggtcccggca aaaaccgcgg agcagctcga aatcgacgcg aaatacgatg
     4921 tctatctctc gcgccaggcg gccgatatcg ccgcctatcg ccgggacgag gccctcgaac
     4981 tgccggagag cctggactat ttgcagttgc ccgggctctc catcgaagtt cgccaaaagc
     5041 ttcattccgc ccgcccccga acgatcggcc aggcggcccg catggacggc gtcacacctg
     5101 cagcactcac gcttctggcc gcgcacctca gacgcaaggg tcggccgtcc aaaactgcgg
     5161 ctgccggaag ctgatgccgg agattcgccg ggttcgtcgc ggtccaaagc gcaagcgaga
     5221 agagcatgcc cgcaccgccc aggcgccgct actcgccggc gctgcggatc gcgcgcgcgc
     5281 cctggcgctc acgccggttt cacgtgaaac attggagcgc cttgaacggt ttgtcgcgct
     5341 tctgctggca tggcagcgga ggacgaacct gattgcgcct tccacagtgc cgctgctgtg
     5401 gacgcgacac atcgccgatt ccctccaact gctcgagctc gcccccaacg cgcgggagtg
     5461 gatcgatctc gggtcggggg gcggctttcc cggtctggtg attgcgtccg cgcttgcggg
     5521 cacgcccggt gcgcgtgttc atctcattga aagtcatggc aaaaaagccg cattcctgcg
     5581 cgaggctcag cgcttgaccg caacgcccgc aagcgttcac gccatgcgca tcgaggaatt
     5641 cgtcacgacc tacgacggtc cggtggatgt cattaccgcg cgcgcggttg ccccgctcaa
     5701 gtcattgttt catcaaacgt ttccgcttct ggggaaaagc ggcgcaatag ccttgttccc
     5761 gaaaggacaa catgcagagc ttgagctgag agaggcgtgc gagtcgcccg ctgtgcaggc
     5821 ttggggcatg gacgcgacgc tcgttgggag ccgtaccgat ccggccggcc gtattgttgt
     5881 gatccgcaat gtggagcgct gcgggacaac gccataagat tccatccgat tcgcaaaagc
     5941 gacgcgatgt gatgctggac ccgatgtcat gaccgatcat gcggattcgc cgcctcaatc
     6001 ggtgccggaa gcggcgcagg tcgtcgcgct agcgagccgc attcccaatc ccgcgccacc
     6061 gcgcgtgatt gcgattgcca accagaaggg cggtgttggc aagaccacga cagcgatcaa
     6121 cctcggcacg gcgctggccg caatcggcga gcaggtgctg atcgtcgacc tcgacccgca
     6181 gggcaatgcc tcgaccggcc tcggcatcga tcgccgcaac cgcagctgtt cgacctacga
     6241 cgtgctgatc ggcgaggccc cgatgcgcgc cgcggtggtc gcgaccgc
//
LOCUS       DATCWM010000171         7479 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_60703, whole genome shotgun sequence.
ACCESSION   DATCWM010000171 DATCWM010000000
VERSION     DATCWM010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7479)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7479)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7479
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60703"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..332)
                     /locus_tag="VIQ50_03205"
     CDS             complement(<1..332)
                     /locus_tag="VIQ50_03205"
                     /inference="COORDINATES: protein motif:HMM:NF014653.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ldh family oxidoreductase"
                     /protein_id="HEY9359415.1"
                     /translation="MLRTDVLTEMESENTRRVHAAALHAFLIDALRACDLNEADAAIV
                     AGAMLEADLTGSDAHGIFRLPGYVKALKRGAMNPRANIRVLERGPATALIDGDHGMGH
                     VVMTYAANL"
     gene            complement(326..1630)
                     /locus_tag="VIQ50_03210"
     CDS             complement(326..1630)
                     /locus_tag="VIQ50_03210"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HEY9359416.1"
                     /translation="MNVQTRPSGHQPWEEVRTRLDQNAPFSNMHATPYYRDAVYDHFS
                     KQEYERRYRALRAKMREHKLDCVIVPGGPSHWSFGGGMQWLTGHWEWHAIASYLVVPL
                     DGEPTLIFSMGGTHAEACRRECANALSDVRHSRGGKYAEVMVERLNELKLERGRIGLV
                     EIDARHTDYLPVNQFNVLRRSLPDAELVFTKGFMHELIVIHSEEELRCVRKAGLLCER
                     AMQAMVARAKPGVAEYELRAAAGAAILDGGGDIDFLIIGSTPMADPAMVFGNPRPSHR
                     KLKKGDIINMELAAGYNGLSAQIGSPITLGAPTDMVRKFWDEITLPGYRKIVAEIKPG
                     NATDNMRLASRFFREHGVQSRPTQVHGIDIVTDKPHVFTERTEADEIDKVLKPGMIIM
                     AEPNPITADGMFGIFLGHTLIVTDAGHECVDNFPLEIAVAEC"
     gene            complement(1636..2682)
                     /locus_tag="VIQ50_03215"
     CDS             complement(1636..2682)
                     /locus_tag="VIQ50_03215"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359417.1"
                     /translation="MMSKACRSIHLVVLAALGLGLGDGATRGAVAQSCSAMRKINIGV
                     SVAPPNVVHTSPYVAKELGFFAKRCIEPNIIQFEGGASATANAAAAQGSAIVSVGDVA
                     IGRGMKVQQFWGLAPRMPQAYLVSPEVKTAADLKGKKLSATGGGVGGFNWRMGREILR
                     TAGLTVDDAQFISAATAGRLPGLLAGQIDGVALHPEDVYLARKQKPALNVLLQLADLM
                     PDYMFNAYGASLAWIARDRALLRDTAAAMIEANRAMFRDKAKVVPIIEKATDKPRDAV
                     EYAIDVLTKNCVWSINTGFDPARTQWSIDNSAENGDIDPEKKPTVEQVANIALAKEAV
                     EAAGGAVIIGNCKD"
     gene            complement(2716..3585)
                     /locus_tag="VIQ50_03220"
     CDS             complement(2716..3585)
                     /locus_tag="VIQ50_03220"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9359418.1"
                     /translation="MTTVARARGELADDALPVDISGDQARAERAAAARRHRRQLIDLA
                     IRLVSLAIALALWELAARNVDPVLFTSPTKVAIAAYHMVLSGELWTYLWPSLVVLAIG
                     FAFAVVLGVGIGLLLARFWVLDVALTVYITFLYSIPSVALVPLIVLWAGFDTTAKVII
                     LFLFAFFPMVINTYQGVKSVDPKLLEVGRAFRCSEGQLWWNIVLPASLPFIVTGLRLA
                     LGRGLIGMVLADLYTAISGIGYLIVRTASTYQVDKMFVPIVTLGLLGVTLTALLRLAE
                     KYVAPWTAGSQQD"
     gene            complement(3582..4400)
                     /locus_tag="VIQ50_03225"
     CDS             complement(3582..4400)
                     /locus_tag="VIQ50_03225"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9359419.1"
                     /translation="MGIGDEAADAAILAEGASKLFLDGAVVAFHQLSLAVKRNEIMCV
                     VGPSGCGKTTLLRCIAGLTNLSSGTLLVHGKPVGMRPPDGVAVVFQHFGLLPWKTVYD
                     NAAFGLAMARVPRADIDARVTHYLDLVGLTGFERHYPYQLSGGMQQRVGLVRALAMNP
                     SILLMDEPFAALDAQTREILQEELLALMERPDERKTMVFITHSIDEAILLGDRIAVMS
                     ARPGRVKEVLSIPFGWPRSADAVRSDPRFAEIRLHIWHQLHSAKPSLRAAREVA"
     gene            complement(4539..5519)
                     /locus_tag="VIQ50_03230"
     CDS             complement(4539..5519)
                     /locus_tag="VIQ50_03230"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9359420.1"
                     /translation="MKMYWLRHVLSFCLLALSANLAPQAYAEDYPTRPVKIISDSAPG
                     SAIDVTLRLVADRLGHIWGQQVLPVNQPGAGGVISARVAAEAAPDGYTLYMPALSVFL
                     PAPGKAGSTAFELPRDFSPIGSLTEQPMFIAAAPSLGVATLPELIALAKQRPGEISYA
                     ATGIGRLTHLTGELLQLRTGIKLLLVPYSGGPNHALNDILGGRIPVIIEGYAGLAGAI
                     QGGNLKALAVASAQRLPDFPNLPTVAETVPGFRAMGWQGLVAPVGTPEAIVQKVSDDL
                     RKVMMDPTLMAQLAGRGSYPLPMSPAEVTAFIREQQQQWGPVLQQLATKP"
     gene            complement(5757..6431)
                     /locus_tag="VIQ50_03235"
     CDS             complement(5757..6431)
                     /locus_tag="VIQ50_03235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TenA family protein"
                     /protein_id="HEY9359421.1"
                     /translation="MSGSKLFSREAWNRNAVLYETIRTLPFNAQLASGALSESRFKHY
                     ITQDAHYLVGFGRALALAAAKAPDADRIVQFAKAAEGALVVERALHGSFFKQYGITAQ
                     LFAQTPLSPACHHYVCYLLATAYAEPYEVLLAALLPCFWIYAEVGRDIHARAAAANPY
                     RAWIDTYAGEEFHAAVRAMIAATDDAAKEVNSPLRARMHAAFTRAAQLEWVFWDSAFR
                     LEAWPV"
     gene            7103..>7479
                     /locus_tag="VIQ50_03240"
     CDS             7103..>7479
                     /locus_tag="VIQ50_03240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359422.1"
                     /translation="MAALVGGFVAATTLPAAAQYLGWGDPGWDGGGVGVSIGFGAPGV
                     YGGYGAYPSYYVGAPAAYAYPSPGYYAYRSPGYGDYGYAGAPAYGYSSTTIYEPGYAY
                     SGSGYVGGYREGIRSRSYAAGGYR"
BASE COUNT         1384 a         2353 c         2437 g         1305 t
ORIGIN      
        1 agattggcgg cataggtcat caccacgtga cccatgccat ggtcgccgtc gatcagcgcc
       61 gttgccgggc cgcgctcgag cacgcgaata ttcgcgcgtg ggttcatcgc gccgcgtttg
      121 agcgccttga catagcctgg caggcgaaaa atgccgtgcg catccgagcc agtgagatcg
      181 gcttcgagca tcgcgcccgc cacaatggcg gcgtcggcct cgttgaggtc gcaggcgcgc
      241 agcgcgtcga tgagaaatgc gtgcaacgcg gcggcatgaa cccgccgggt gttctcgctt
      301 tccatctcgg tcagcacatc ggttctcaac actccgccac cgcgatctca agcgggaaat
      361 tgtcaacgca ttcgtggcca gcatcggtca cgatcaaggt gtgcccgagg aagatcccga
      421 acattccgtc cgccgtgatc gggttgggct cggccatgat gatcatgccc ggcttgagta
      481 ccttatcgat ctcgtcggcc tcggttcgtt cggtaaagac atgcggcttg tcggtgacga
      541 tgtcgatgcc gtgcacctgc gtcgggcgcg actgcacacc gtgctcgcga aagaagcggc
      601 tggcgagccg catattgtcg gtggcgttgc cgggtttgat ctcggcgacg atcttgcgat
      661 agccgggcag cgtgatctcg tcccagaatt tgcgcaccat atcggtgggc gccccgagcg
      721 tgatcggcga gccgatctga gccgagaggc cgttgtagcc ggcagcaagc tccatattga
      781 tgatgtcgcc cttcttgagc ttgcggtgcg acggccgcgg attgccgaac accatggccg
      841 gatcggccat gggcgtcgat ccgatgatga gaaagtcgat gtcgccgccg ccgtcgagga
      901 tcgccgcgcc ggccgccgcg cgcagctcgt attccgccac gccgggcttg gcgcgcgcca
      961 ccatcgcctg catggcgcgc tcgcacagta agccggcttt gcgcacgcag cgcagctcct
     1021 cctcactgtg gatcacgatc agctcgtgca tgaagccttt ggtgaagacg agctcagcgt
     1081 cgggcaacga ccggcgcagc acattaaact ggttgaccgg cagataatcg gtgtgccgcg
     1141 catcgatctc gacgagcccg atgcggccgc gctcgagctt gagctcgttg agccgctcga
     1201 ccatgacctc ggcgtatttg ccgccgcggc tgtggcgcac atccgacaac gcgttggcgc
     1261 attcgcgccg gcaggcctcg gcatgagttc cgcccatgga gaagatcagc gtcggctcgc
     1321 catcgagcgg caccaccagg taggacgcga tcgcgtgcca ttcccaatgg ccggtgagcc
     1381 actgcatgcc gccgccgaag ctccaatggc tcggaccgcc cggcacgatc acgcagtcga
     1441 gcttgtgctc gcgcatcttt gcgcgcagcg cgcggtaacg gcgctcatac tcttgtttgg
     1501 agaagtgatc atagaccgcg tcacggtaat acggcgtcgc atgcatgttc gagaacggcg
     1561 cgttctgatc gagccgtgtg cgcacctctt cccacggctg gtgcccggac gggcgcgtct
     1621 ggacgttcat gacattcaat ccttgcaatt gccgatgatg acggcgccgc ccgcggcctc
     1681 gaccgcctct ttggcgagcg caatattcgc gacctgctcg accgtcggct ttttttccgg
     1741 gtcgatgtcg ccgttctcgg cgctgttgtc gatcgaccat tgcgtgcgcg cggggtcgaa
     1801 gccggtattg atcgaccaga cacaattttt ggtgagcacg tcgattgcgt attccaccgc
     1861 atccctcggc ttgtcggtcg ctttttcgat gatcggcacg actttcgctt tgtcgcggaa
     1921 catggcgcga ttggcctcga tcatcgcggc ggcggtatcg cgcaggagcg cgcgatcgcg
     1981 ggcgatccac gcgagcgaag caccatacgc gttgaacatg taatcgggca tgaggtcggc
     2041 gagctgaagg aggacgttga gggccggctt ctgcttcctg gcgagataga cgtcctcggg
     2101 atgcagcgcg acgccgtcga tctgtccggc gagcaggccc ggcaagcggc cggcagtggc
     2161 cgcggagatg aattgcgcgt catccaccgt cagcccggcg gtgcgcagaa tttcgcggcc
     2221 catgcgccag ttgaagccgc ccaccccgcc accggtcgcg ctgagctttt tgcccttgag
     2281 gtcggcggcg gtcttcacct cgggcgacac caagtaggcc tgcggcattc tcggcgccaa
     2341 gccccagaac tgctgcacct tcatgccgcg gccgatggct acatcgccca cgctcacgat
     2401 ggcggagcct tgcgcggcgg cggcattggc ggtggcagat gcgccgcctt cgaactggat
     2461 aatgttcggt tcgatgcagc gcttggcaaa aaagccgagc tccttggcca cgtagggcga
     2521 ggtgtgcacc acgttgggcg gcgcaaccga aacgccaata ttgattttgc gcatcgcgct
     2581 gcagctttgc gcgaccgcgc cgcgggttgc cccatcgccc agcccgagac cgagcgctgc
     2641 aagcaccacg agatggatcg accggcacgc cttcgacatc atgctctcat cgtcgtcttt
     2701 gcctcgcgca gtgatttagt cctgttgcga gcctgcggtc cagggcgcta cgtatttctc
     2761 ggctaggcgc agcagcgccg tcaaagtcac gcccaaaagc ccgagcgtca cgatcggcac
     2821 gaacatcttg tccacctgat aggtactcgc ggtgcgcacg atcaggtaac cgatgccgga
     2881 aatcgcggta tagagatcgg cgagcaccat gccgatcagc ccgcggccga gcgctagccg
     2941 caatcccgtc acgatgaacg gcagcgacgc cggcagcacg atattccacc acaactggcc
     3001 ctcggagcag cgaaacgcgc gaccgacctc gagcaacttt ggatcgacgc ttttgacgcc
     3061 ttggtaggtg ttgatcacca tcgggaaaaa cgcgaacagg aagagaatga tgactttggc
     3121 cgtggtgtcg aacccagccc acagcacgat cagcggaaca agcgcgaccg agggaatgga
     3181 atagagaaac gtgatgtaca cggtgagtgc gacgtcgagc acccagaagc gcgcgagcag
     3241 gagcccgatg ccgaccccga gcaccaccgc gaatgcaaag ccgatcgcga gcacgaccag
     3301 gctcggccac aggtaggtcc acagctcgcc gctgagaacc atgtgatagg cggcaatcgc
     3361 cactttggtc ggtgatgtaa ataggaccgg gtcgacgttg cgagctgcga gctcccacaa
     3421 cgccaacgcg atcgcgagcg acacgaggcg gatcgcaagg tcgatgagtt gacgacgatg
     3481 cctgcgcgca gccgcagcgc gctcggcacg cgcctgatcg ccggagatat cgaccggcag
     3541 cgcgtcgtcg gccaactcgc cgcgggctcg ggccacagtg gtcacgcaac ctctctcgcg
     3601 gctcgcagac taggcttcgc gctgtgaagc tgatgccaga tgtgcaagcg gatttccgcg
     3661 aagcgcggat cggaacgcac cgcatccgcg ctgcgaggcc atccgaaggg tatgctaagc
     3721 acctccttga cgcggcccgg gcgcgcgctc atcaccgcga tgcggtcacc cagcaggatc
     3781 gcctcgtcga tcgagtgggt gatgaacacc atggtcttgc gctcatccgg ccgttccatg
     3841 agcgcaagga gctcctcctg caggatctcg cgcgtctgcg cgtcgagcgc cgcaaacggc
     3901 tcgtccatca acagaatcga tgggttcatt gccagcgcgc gcacgaggcc gacgcgctgc
     3961 tgcatccccc cggaaagctg gtagggataa tggcgctcga agccggtcag tcccaccagg
     4021 tcgaggtagt gcgtgacccg cgcgtcgatg tcggcgcgcg gcacccgcgc catggccagc
     4081 ccaaatgcgg cgttatcgta gaccgttttc cacggcagga gcccgaaatg ctgaaaaacg
     4141 acggcaaccc cgtcaggcgg acgcataccg accggcttgc catggacgag aagggtaccg
     4201 ctgctgagat ttgtgaggcc cgcgatacag cgcaacagcg tggtcttgcc gcagcccgag
     4261 ggacccacga cgcacatgat ctcgttgcgc ttgaccgcaa gcgacagttg atgaaaggcg
     4321 acgacggcgc cgtcgaggaa cagcttgctg gcaccctcgg cgaggatggc tgcatccgcg
     4381 gcttcgtcac cgatccccat gcgtcctcgt cacgcccgca gtcgtccttc gttggcgcgg
     4441 cgggtatcgg caagtgtccg gaaaaaactt accgaacgca aatgcgagct tccgcgcgga
     4501 cgcgggtgcc gaattcgacc ggcggagaac gcccgcgcct atggcttggt ggcaagctgc
     4561 tggaggaccg ggccccactg ttgttgctgc tcgcgaatga aggcggtgac ctcggcgggc
     4621 gacatcggaa gcggatagct gccgcggccg gcgagctgcg ccatgagggt cgggtccatc
     4681 atcactttgc gcaggtcatc gctgaccttt tgcacgatcg cttccggggt gccgacgggc
     4741 gccaccagtc cctgccagcc cattgcgcgg aagccgggca cggtttcggc caccgtcggc
     4801 agattgggga agtcgggcag acgctgcgcc gatgcgaccg cgagcgcctt gagattccct
     4861 ccttgaattg ctcctgcgag gcctgcgtag ccctcgatga tcacaggaat gcgaccgccc
     4921 aagatgtcgt tgagcgcgtg gttggggccg cccgaataag gaacgagcag caatttgatc
     4981 ccggttcgca gttgcagcag ttcaccggtc aaatgcgtga ggcgtccgat cccggtggcc
     5041 gcataggaga tctcgccggg ccgctgcttt gccagcgcaa tcaattccgg cagcgtcgca
     5101 acaccgaggg agggcgctgc cgcgatgaac atcggctgct cggtcaacga accgatcggc
     5161 gaaaaatcgc gcggcagctc aaacgcagta ctgcctgctt tgccgggcgc cggcaggaac
     5221 accgacagcg ccggcatata aagcgtatag ccatcgggcg cagcctcggc cgcaacgcga
     5281 gcggatatca cgccgccggc gccgggttgg ttgaccggca agacctgctg accccagatg
     5341 tggcccagcc gatcagcgac caggcgcaac gtgacgtcga ttgcactgcc cggggccgaa
     5401 tccgaaatga ttttgactgg ccgggtcgga tagtcctcgg catacgcctg tggtgcgaga
     5461 ttggccgaga gcgccagcag acaaaacgac aacacgtgcc gaagccagta cattttcatg
     5521 tcgagatctc cgagagcgtg aacgacggcg gccctcaacc cgatattatc accgcgctgg
     5581 tcacgcgaaa tggggcgaga ggacacagac gcctcgcgtg cggcccgcac cgagaggctg
     5641 cgtatttgtc atgatccgcc ctcccccgtt tcagaccaag cttggatgcg tcgtgggggt
     5701 ggcgcggcag gtctggggca gcgcgtgacc agcggctccg ctcgagcgac actcgcctaa
     5761 acgggccacg cctccaaccg gaaggcggag tcccagaaca cccactcgag ctgcgcggcg
     5821 cgggtgaaag ccgcatgcat gcgcgcgcgc agcggcgaat tgacttcttt agcggcgtcg
     5881 tcggtggccg cgatcatggc gcgtaccgcg gcgtggaatt cctcgcccgc gtaggtatcg
     5941 atccaggctc gatatggatt tgccgccgcc gcgcgggcgt ggatgtcgcg cccgacctcg
     6001 gcgtagatcc agaagcaagg cagcagcgcc gcgagcagaa cttcataagg ttcggcatag
     6061 gccgtggcga gaagataaca aacatagtgg tgacacgccg gcgagagcgg tgtttgcgca
     6121 aacagctgcg ccgtgatgcc gtattgcttg aaaaacgagc cgtgcagcgc gcgctcgacg
     6181 acgagggccc cctccgcggc tttggcgaac tgcacgatcc gatccgcatc cggcgccttc
     6241 gccgctgcga gggccaaagc gcgtccaaac ccgaccaggt aatgcgcgtc ctgcgtgatg
     6301 tagtgcttga accgcgactc gctcagcgcg cccgatgcga gctgcgcgtt gaagggaagc
     6361 gtgcggatgg tctcgtaaag gacggcgttg cgattccagg cctcgcgcga gaaaagcttg
     6421 cttccgctca tgctggcggg tccctgatcc ggcgctttcc attatatgcc gtttcgcagc
     6481 cctcgtggaa aacgggccga tgcggcggtc gcagatgcgc gcggagaaaa gcgacggagg
     6541 cgctcgcgct gcgccggacg caggaacgcg ccgccgcgta gtgcattgat tttgcctaaa
     6601 tgaagggacg tcgaatgaac gatcctcaca gtgcgcccga taggcgaagc tggccgcatg
     6661 cgagcagcat ggcctggatc gcagcgatct cgctttggtg ctggtcgcag gagccgcgct
     6721 gtacagttcg ggacgcaaca cctccacgtc cgcggtcgtg cccgaggcga gcacaggtca
     6781 aagcccctcc ccaagagcgc cgtcgaccaa ccagtaacgc gaccgatcgg gagaggcggt
     6841 agtcgccggg cggtataatg ggagcgacgg cgccacctgg tttcgcactt attccggaac
     6901 ctcatcctcg ctcgcgcatt ggcgctgtgg gacgcgctga tgcggaactt cgagcgtgat
     6961 cccatgccac gccttgcggg tccgtcgggc tcagcccacg agatggctcg ggtgtgaatc
     7021 agcaaccaca gggcaggacg gtcggagtgc cgaccgatgc cttttgaatt gaaaggagac
     7081 gagtatgcgt aaaggagttg caatggccgc gttggttgga ggttttgtcg cggcgacgac
     7141 cttgcctgct gccgcgcagt acctcggctg gggcgaccca ggctgggatg gcggcggagt
     7201 gggagtgagc attgggttcg gagcgccggg cgtctacggt ggctatggcg cctatccgag
     7261 ctattacgtt ggtgcgccgg cagcgtatgc gtatcccagc ccggggtatt acgcgtatcg
     7321 cagcccgggg tatggagact atggatacgc aggtgcgccc gcatatggct atagctcgac
     7381 caccatctac gagcctggct acgcctacag cggatctggc tacgttggcg gctaccgcga
     7441 aggtatacgc tcgcgaagct acgcggctgg cggctaccg
//
LOCUS       DATCWM010000172         5557 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_66206, whole genome shotgun sequence.
ACCESSION   DATCWM010000172 DATCWM010000000
VERSION     DATCWM010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5557)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5557)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5557
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66206"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..624)
                     /locus_tag="VIQ50_03245"
     CDS             complement(<1..624)
                     /locus_tag="VIQ50_03245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013845010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEY9359423.1"
                     /translation="MGRRKLGTLDVSAIGVGCMSMTPIYGVPDPDEAIATLHRAPDLG
                     IDFIDTSDAYGANGANEELVGRALKGRREKYILATKFGNIRLPDGKPGAKGHPDYVIE
                     ACEKSLKRLGTDTIDLYFIHRVDETVPIEDTVGAMVRLKTQGKIRHLGLSEAGANTIR
                     RAQKVHPMAALQTEYSLWTRDVEAEILPLAHELGIGFVAYSPLGRGFL"
     gene            676..1533
                     /locus_tag="VIQ50_03250"
     CDS             676..1533
                     /locus_tag="VIQ50_03250"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEY9359424.1"
                     /translation="MSLELVSIETGTYPLDGAFYRPEAGTDKGTILIMHGNCGNFYTG
                     VPRHIAPLLVRLGYAVLAYNRRGHDIMASTARERMGGAYQRIHEMIEDNQHAERWLAT
                     RGCDRPIVIGHSNGGMLAVKHCAGSTSVRALVLLSAHMGGKNLFRTISEAGLMAGERF
                     DEFSTRARELVAANKGHELMQVPGWWWVISAQTFVDYLDVCPDILELAPQVRCPVLFL
                     RGDREAKHVYPGEAFVERAGGPAEFALVPDCDHFYGGREKAAVKLIARWLARSGINST
                     PEVAAAAHK"
     gene            complement(1539..1796)
                     /locus_tag="VIQ50_03255"
     CDS             complement(1539..1796)
                     /locus_tag="VIQ50_03255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359425.1"
                     /translation="MTHTVTGQDGRLIWGTTSSANNDSKEPFAWALSADNKTIEGADS
                     DGYYRITIVSADRFEKCYVHNATGPSHSIVATCFMMDRVKN"
     gene            complement(1793..1969)
                     /locus_tag="VIQ50_03260"
     CDS             complement(1793..1969)
                     /locus_tag="VIQ50_03260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359426.1"
                     /translation="MKRLAAAAMLFMMPVAAGAQDAIPALKGTWRGTGKILLFGTTEH
                     LSGSPQNAVVRDSR"
     gene            2432..3946
                     /locus_tag="VIQ50_03265"
     CDS             2432..3946
                     /locus_tag="VIQ50_03265"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4118 domain-containing protein"
                     /protein_id="HEY9359427.1"
                     /translation="MDVVRRELRGSLIALAMVAVTTVVVYGLTQSLEVRRGSVLYLLP
                     VLLAGWHLGLIPALVAAVAGVLWSGYFFFSPYYSFYLSRPNEILNLLLFMVVAGVTSH
                     LANSMKTQTEIAKKREKEMGDLYAFSRRVAGAASAADIYLAIEEHLASLVQRKVVLFG
                     AGSDRDAKPEQAALSQRVHAAIEEVQAGRTPATTVDDGGGDIWLVRRVSQKNADFGVI
                     AIDLGSVPPGAIDEVRKRVNDVLSDAAATLERLDVARALNDAKMRSETELLREALIGS
                     VSHELRTPLASILGAATVLSKSAAISKDERLTSLAGVVRDEAERLNNDIQNLLDATRI
                     SREQIRPRQEWIEPQDIVNAALERRRRRLSGHQVSLDMDSNLPFIYVDAVLVEQAFGQ
                     VVDNAAKYSPPGSPITVAAKRNGHDVVLSVHDEGAGLTAQENAHVGERFFRGARLATT
                     TSGSGLGLWIAKAFVSANGGKIEAASAGADRGTTVSIHLPFATPASQPEVGPDD"
     gene            3939..4655
                     /locus_tag="VIQ50_03270"
     CDS             3939..4655
                     /locus_tag="VIQ50_03270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY9359428.1"
                     /translation="MTENNPVVLVVDDEVQIRRFLRAGLELDGFSVQDAETGADALRW
                     ATLKPPDLVILDLGLPDMDGSEVLERLRAWSSVPLIVLSVRSNEAEKVRLLESGADDY
                     VVKPFGMAELLARAHAAMRRHVRDSSGEPVVRVGPLTIDLAARIVTINGARVMLTPKE
                     YRLLQLLAQHAGNVVTHQFLLKEVWGSPHLHDTHYLRIFVRKLRQKIEVDPTQPRILL
                     TELGVGYRLVAPEGAVATAK"
     gene            complement(4736..5478)
                     /locus_tag="VIQ50_03275"
                     /pseudo
     CDS             complement(4736..5478)
                     /locus_tag="VIQ50_03275"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
BASE COUNT          997 a         1729 c         1809 g         1022 t
ORIGIN      
        1 gagaaaaccg cggccgagcg gagaataggc gacgaagccg atgccgagct cgtgggcgag
       61 cggaaggatc tccgcttcga cgtcgcgggt ccacagcgaa tactcggtct gcagggcggc
      121 catcggatgg accttttggg cgcggcggat ggtgttcgct cccgcttccg aaagtccgag
      181 atgcctgatc ttgccctgcg tcttgagtcg caccatggcg ccgacggtat cctcgatcgg
      241 cacagtctcg tcgacgcgat gaatgaaata gaggtcgatg gtgtcggtcc ccaaacgctt
      301 gaggctcttc tcgcaggctt cgatgacgta gtccggatgg cccttggcgc ctggcttgcc
      361 gtcgggcagg cgaatgttgc cgaacttggt ggcgaggatg tacttttcgc ggcgcccttt
      421 tagggcgcga ccgaccagct cctcgttggc gccgttcgct ccgtaggcat cggaggtatc
      481 gatgaagtcg atgccgagat cgggcgcccg gtgcagcgtg gcgatcgcct cgtcgggatc
      541 gggcacgccg tagatcggtg tcatgctcat gcagccgacc ccgatggccg acacgtcgag
      601 ggtccctaat tttctgcgtc cgatcatgat tattgccgct gctcgtcgta gcaagtgaag
      661 ggaatggtga agatgatgag tctggagctt gtgtcgatcg agaccggcac ctatccgctc
      721 gatggtgcct tctacaggcc ggaagccggc accgacaaag gcacgatcct catcatgcac
      781 gggaattgtg gaaacttcta caccggcgtg ccgcgccaca ttgcgccgct gctggtgcgg
      841 ctcggctatg ctgtgctcgc ctacaatcgt cgcggccacg acattatggc gagcaccgcg
      901 cgggaacgca tgggtggagc ctaccagcgc atccacgaga tgatcgagga taaccagcat
      961 gcggaacgct ggctcgcaac gcgcggctgt gaccgcccca tcgtgatcgg tcattccaat
     1021 ggcggaatgc tggcggtgaa gcactgtgcc ggcagcacga gcgtgcgggc gctcgtgctg
     1081 ctctccgccc acatgggcgg aaagaatcta ttccgtacga tcagcgaagc aggcttgatg
     1141 gccggcgagc gtttcgatga gttcagtacg cgcgcccgcg agctggtggc agccaataag
     1201 ggtcacgagt tgatgcaggt cccgggctgg tggtgggtca tcagcgcgca gaccttcgtc
     1261 gattatctcg acgtctgccc cgacattctg gagctggcgc cgcaggtgcg ctgcccggtg
     1321 ctgttcctgc gcggcgatcg cgaggcgaag catgtctatc ccggcgaggc ctttgtcgag
     1381 cgcgccggcg gcccggcgga gttcgccctc gtgcccgact gcgatcattt ctacggcggg
     1441 cgcgagaagg ccgcggtcaa actgatcgcc cgctggctcg cccgctccgg catcaattcg
     1501 actccagaag tcgcggcagc cgcgcacaaa taacggcact agttcttcac gcgatccatc
     1561 atgaagcaag ttgcgacgat ggagtgcgac ggccccgtgg cattgtggac atagcatttc
     1621 tcgaaccggt cggccgacac gattgtgatc cggtaatagc cgtcggaatc ggcgccctcg
     1681 atcgtcttgt tgtcggcaga cagcgcccag gcgaagggtt ccttgctgtc gttgttggcg
     1741 gacgatgtcg tgccccagat cagccggcca tcttggcccg tgaccgtgtg ggtcacctcg
     1801 agtcgcgcac gaccgcgttc tgcggcgatc cggagagatg ctccgtggtc ccgaacagga
     1861 gaattttgcc ggttccccgc cacgtgccct tgagagctgg aatcgcgtct tgggccccag
     1921 cggcaaccgg catcatgaac agcattgctg cggctgccaa acgcttcatc tcgtcctcct
     1981 gctttggctt ccgccgtcgg attgtcgccc caactgttca atgtcacaca atttacgccc
     2041 tcacaacggc gtgagcgaat ccgttgcaat ggcaatcttg cattcccgct tgcgatgcga
     2101 ggggcatgtc ccaggtggcg atcgaatctc gcggcccgca ggccgcaatc ggcatgaagg
     2161 tggagggcgg gctgcagttc agcgtgcggc tgcgttcttg cccagccagc cgacgatcca
     2221 atcggcgcgc gcgaaatggt ggcgcgtcct cctcgcgcgg aggtcattgc gacctcctca
     2281 ggcttcgccg ccgcgctcgc acccccgcgc tgccggcatg ggtgctgctt aaccacgcgc
     2341 gctcggcagg gatgaccatg caaggcggga gtattatctt tagggctatt ccagcgccgt
     2401 tgccggcgcg ggaggacgat tcgtggctgg aatggatgtg gttcgacgcg agttgcgcgg
     2461 cagccttatt gcgctggcga tggtggctgt gaccacggtc gtggtctacg ggctgaccca
     2521 gtcgctcgag gtgcgccgcg gctcggtcct ctacctcttg ccggtgctgc tcgcgggctg
     2581 gcatctcggg ctcattccgg cgctggtcgc ggcggtcgcc ggcgtgctct ggtcaggata
     2641 ttttttcttt tcgccgtact acagcttcta tctctcgcgg ccgaacgaga ttctcaatct
     2701 cctgttgttc atggtggtgg cgggggtgac gagccacctc gcaaattcga tgaagacaca
     2761 gaccgagatc gccaaaaaac gcgagaagga aatgggcgat ctctatgcct tctcgcgccg
     2821 ggtggccggg gcggcatcgg ccgcggatat ctacctcgcg atcgaggagc atcttgcgag
     2881 tctcgtccag cgcaaggtgg tgctcttcgg ggccggctcc gatcgcgacg ccaagcccga
     2941 gcaggctgcg ttgtcgcagc gcgtgcatgc cgccattgag gaggtacaag cgggccgcac
     3001 gcccgccacc acggtcgacg acggcggcgg cgatatctgg ctggtccgtc gcgtgtcgca
     3061 aaagaacgcc gactttggcg tcattgccat agatctcggc agcgttccgc cgggtgcgat
     3121 cgatgaagtc cgcaagcgtg tcaacgacgt gctgtcggac gctgccgcga cgctcgagcg
     3181 cctcgacgtc gcccgtgcgc tcaacgatgc aaaaatgcgt tccgagaccg agttgctgcg
     3241 cgaggcgctg atcggctcgg tttcgcacga attgcgcacc ccgctggctt ccattctggg
     3301 cgccgccacg gtgctgagca aatccgcagc gatcagcaag gatgaaaggc tgacctcgct
     3361 cgcgggcgtg gtgcgcgacg aggcggagcg cctcaacaac gacatccaga acctgctcga
     3421 tgcgacccgc atcagccgcg aacagatcag gccccggcag gaatggatcg agccgcagga
     3481 catcgtcaat gctgcgctcg agcgccggcg tcggcggctt tccggccacc aggtctcact
     3541 cgacatggat tccaatctgc ccttcatcta cgtcgatgcc gtgctggtcg agcaggcgtt
     3601 cggacaggtc gtcgacaacg ccgcgaagta ttcacccccg ggctcgccga tcacggtggc
     3661 cgccaagcgc aacggccatg acgtcgtgct gtcggttcat gatgagggcg cggggctcac
     3721 ggcgcaggag aacgcgcatg tcggcgagcg gtttttccgc ggcgcccgcc ttgcgacgac
     3781 aacgtcgggc tccggtctcg ggttgtggat cgcaaaggcc ttcgtcagcg ctaacggtgg
     3841 caagatcgag gccgcgagcg cgggcgccga tcgaggcacc acggtctcaa ttcacctgcc
     3901 ctttgcaaca cctgcaagcc agcccgaggt cggccccgat gactgaaaac aatcccgttg
     3961 tcctcgtcgt cgacgacgaa gtgcagattc gccgcttcct gcgcgcgggc ctcgagctcg
     4021 atggcttctc cgtgcaggac gccgagaccg gcgccgatgc gctgcgttgg gcgacgctca
     4081 agccgcctga tctcgtcatt ctcgatctgg gattgcccga catggacggc tccgaggtgc
     4141 tcgaacgcct gcgggcgtgg tcgagcgttc cgctcatcgt gctatcggtg cggtcgaacg
     4201 aggcggagaa ggtgcgcctg ttggagagcg gggccgacga ttacgtggtc aagccgttcg
     4261 gcatggcgga actcttggcg cgcgcgcacg ccgcgatgcg gcgccacgtg cgcgactcct
     4321 ccggtgaacc ggtggtcagg gttggaccgc tcacgatcga tctcgccgcg cgaattgtga
     4381 ccatcaatgg cgcccgcgtc atgctcacgc cgaaggaata tcggctgctg cagctcttgg
     4441 cccagcacgc aggcaacgtc gtcacccacc agttcctgct caaggaggtc tggggatcgc
     4501 cacacctgca cgacacacat tatctgcgga tcttcgtgcg caagttgcgg cagaagatcg
     4561 aggtcgaccc gacccagccg cggatcctgt tgaccgagct cggcgtcgga tatcggctcg
     4621 tggccccgga gggggcagtc gcgacggcga aataaggcgt gtactcatta cggatgtccg
     4681 cttttgcggt gaagcggact gcatcggagt ggacgtttgc ccgcggcggt cggggtcaaa
     4741 gggcagagcg tacagccaga tagactccaa gcgccatcaa acccgtaaag aaccatttgc
     4801 ggaacgtcgt cggcgacatt cgcaggcgga ttgcctgccc gatccacatc ccggcgcagg
     4861 cgagcgccag acctgcgatc gtgtcgctgg caatggagag ccgaagctcc ccttcgagcg
     4921 ccacgttgac ggcaagcgcg atggtcgaga cagcgaacga aagcccaagc gcctgcacga
     4981 gttcatcctt ctccaaacct atggcctgca agtagggaac tgccgggatc agaagccccc
     5041 cgtcgccgcc gtgatcaatc cggtgacggc tccaacgatc ggcgaaaata tcggctccca
     5101 ctgtttggca acgaacagcc ggagcgctgc aagccccgtg atcgcatata gagccaatgc
     5161 gataccgagc agcgcggtgc cgaagcgagc gcttgcggcc gtcatgagcc cgaggcccgc
     5221 cgcccagatg ccgaggcaaa cggcgagcat catcggccac agtcgacgaa gcacgacaga
     5281 aagcgccggg ccagccagca tctgccagac gtttgtaatg agtgacggca agatagggat
     5341 ggcggctgcg tgcacgggcg gcatcacgac tgccagcagg cccatcgaga tcgtcggaag
     5401 acccaggccg atcacgccct tgatgaaccc tgcgagcgcg aacacgcagc cgacgtaaat
     5461 gagaaccgga tccagcacgg gacagactgt tatcgatcat agccccggtc gcaatgcgca
     5521 ggtttcgaag tgagatttcg gattcagcga accgagg
//
LOCUS       DATCWM010000173         3184 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_460307, whole genome shotgun sequence.
ACCESSION   DATCWM010000173 DATCWM010000000
VERSION     DATCWM010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3184
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_460307"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1338)
                     /locus_tag="VIQ50_03280"
     CDS             complement(<1..1338)
                     /locus_tag="VIQ50_03280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HEY9359429.1"
                     /translation="MRNISPLVAPRSIAVIGASTNPTKSGGVLFDNLVKGNFQGPLYP
                     INRTATQIMGKTAYPTLADVPEKVDLVYVVLPQQHVEDAVKQCIAAGARAACIITAGF
                     SEAGPKGRGDEERLREIARASGLLLAGPNTIGMVNAEVGMMGSFVNFPRWKDGGVSFF
                     TQTGIFTGAVMLHVMSGAAQRLPVGKSIDVGNKIDVDELDFLHFAAADPATKVIGLYI
                     ESIRNPRAFLDKAREVRKSKPIVVLKPGRTKDGARASTSHTGSLASDDDILDGALRQY
                     GIARAEDEDDFLNALRALVMLPKPRGKRVGIGTTSGALGVISTDLLVESGLELATFEP
                     VTLAAMRTILPDWLEPANPFDFWIGIDIKGPREAHEIGLTALFADPNVDLVLCTLLAP
                     GNADFPEFGELLRRLRRAYDKPVALVIYGGEAQQRWTADLEGDDVPIFDTTRAG"
     gene            complement(1348..2109)
                     /locus_tag="VIQ50_03285"
     CDS             complement(1348..2109)
                     /locus_tag="VIQ50_03285"
                     /inference="COORDINATES: protein motif:HMM:NF024938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HEY9359430.1"
                     /translation="MSTIDVGAREPRSMPTQPSVDIAALIAAARAQRRSVLTEPEAKA
                     FLRAQGICVPPGRVVRSADEAPAAVDVIGAPVVVKAVAYELSHKTEAGAVMFPIDSAA
                     AAQAACRTITARVAAYRPDIVLEGFLVEAYRPAQPEWILALRNDPHFGPVVMFGLGGI
                     YVETLRQVSFRLAPLRGEDIDALLSERPVMRLLSGARGAAPSNRRAVVDVLRRLSELS
                     MQPSIMREISEIEINPLAVTETGALALDALIVLRS"
     gene            complement(2096..3154)
                     /locus_tag="VIQ50_03290"
     CDS             complement(2096..3154)
                     /locus_tag="VIQ50_03290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEY9359431.1"
                     /translation="MLPTQMKAVIFEQYGDADVLRYTDFRVPKLERGEALVKVHAVSL
                     NGYDLMARAGRYKPNKGKFPHILGGDFGGELVALGPETLCELAMGTRVTSWWILPCGR
                     CEQCMAGHHNRCASDYRYLGAHEHGAYAQYVKLPADHLIPLPDSVTFEQAAAFPNAFG
                     TAWHMLVDRADLRAGETVLVNSASSGVSMAAIQICKLAGAYVYTTSSADWKLERAKEL
                     GADEVINYNNVDFVDEILKRTKKRGVDLVVEHVGGDFLEKSIRCLTRGGRVVTVGGTK
                     SYDCKVPVNYIFHKELQIIGSNSATKHDLEVMMPLLGSGKLKTVIDRVFPLHEAVSAH
                     RYLESAKQFGKVLLRVDH"
BASE COUNT          588 a         1017 c          986 g          593 t
ORIGIN      
        1 acccgcccgc gtcgtgtcga agatcggcac gtcgtcccct tcgagatccg cggtccagcg
       61 ctgctgcgcc tctccaccgt agatcacgag cgcgacgggc ttgtcatagg cgcggcgcag
      121 tcgccgcagc agctcaccga attccgggaa atcggcgttg cctggcgcga gcaaggtgca
      181 gagcaccagg tccacattcg gatcggcaaa tagcgccgtg agtccgattt cgtgcgcttc
      241 gcgtggtccc ttgatgtcaa taccgatcca gaagtcgaac ggattggccg gttcaagcca
      301 gtcgggaagg atcgtgcgca tggcggcgag cgttacgggc tcgaacgtgg cgagttccag
      361 accgctctcg acgagcaggt cggtggagat cacgccgagc gcgccgctcg tggtaccaat
      421 gcccacgcgc ttgccgcgcg gtttgggtag catgaccagc gcgcgcagcg cgttgaggaa
      481 gtcgtcctca tcctcagcgc gcgcgatgcc atattgcctc agcgccccgt cgagaatgtc
      541 gtcatccgac gcgagcgagc ccgtgtgcga ggtagacgcc cttgcaccgt ccttggtgcg
      601 gccgggcttg agcacgacga tcggcttcga tttgcgcacc tctcgcgctt tatcgaggaa
      661 cgcgcgcgga ttgcgaatgc tttcgatata aagaccgata accttggttg ccgggtcggc
      721 ggccgcgaaa tgcaggaaat cgagctcatc gacgtcgatc ttgttgccga cgtcgatgct
      781 cttgcccacg ggcaggcgct gggccgcgcc gctcatcacg tgcagcatga cagctccggt
      841 gaagatgccg gtctgggtga agaacgagac gccgccatcc ttccagcggg gaaaattgac
      901 gaagctcccc atcatgccga cctcggcgtt caccatcccg atcgtgttgg ggccggcaag
      961 cagcaatccg gatgcgcggg cgatttcgcg caggcgctct tcatcgccgc ggcctttcgg
     1021 accggcttcc gagaaaccgg cagtgatgat gcaggcggcc cgcgccccgg cagcgatgca
     1081 ctgcttcact gcatcctcca catgctgctg cggcaacacg acgtaaacga ggtcgacctt
     1141 ttccggcaca tcggcgagcg tcggataggc ggtcttgccc ataatctgcg ttgcggtgcg
     1201 attgatcggg taaagcgggc cttggaaatt gcccttgacc aggttgtcga acaggacacc
     1261 ccccgatttg gtcgggttgg tcgaggcgcc gatcacggcg atcgagcggg gcgcgactag
     1321 cggactgatg ttccgcatca catgctccta ggaacgaaga acgatcagcg catcgagcgc
     1381 cagcgcgccg gtttcggtta ccgcgagagg attgatctcg atctcggata tttcgcgcat
     1441 gattgagggc tgcatcgaaa gctcggagag gcggcgtagc acgtcgacga ccgcgcgccg
     1501 gttgctcggt gcggctccac gcgcgccaga aagcagccgc atgacgggcc gttcgctcag
     1561 cagcgcgtcg atatcctcgc cgcgcagcgg tgccagccgg aatgagacct gccgcagtgt
     1621 ttcgacgtag atgccgccca ggccgaacat aaccacggga ccaaaatgcg gatcgttgcg
     1681 cagcgccagg atccattccg gctgcgccgg ccgataggct tcgaccagga acccttcaag
     1741 cacgatgtcc ggccgatacg ctgcgacgcg tgcggtaatc gtccggcacg ccgcttgagc
     1801 cgccgcggcg gaatcgattg ggaacatcac cgcgccggct tcggtcttat gtgataactc
     1861 atacgcgacc gccttcacga caacaggagc gccgatcaca tcgaccgccg cgggcgcctc
     1921 atcggcgctg cggacgacgc gacccggtgg cacgcaaatg ccttgcgccc gcaggaacgc
     1981 ctttgcttca ggctcggtca acacgctccg gcgctgcgca cgggcggcgg caatgagcgc
     2041 ggcaatgtcg accgagggtt gcgtcggcat cgagcgcggc tctcgcgcgc ccacatcaat
     2101 ggtcgacacg caagagcacc ttgccgaatt gcttcgccga ttcgagatag cgatgggcgg
     2161 acaccgcttc gtgcaacggg aacacccgat caatcacggt cttcaacttc ccgctgccta
     2221 agagcggcat catcacttcg agatcatgtt tggtggcgct gtttgaaccg atgatttgca
     2281 gctccttgtg gaagatgtag ttcaccggga ctttacaatc gtaggacttc gtaccgccga
     2341 cggtgaccac ccggccgccg cgcgtgaggc agcggatcga tttttccagg aaatccccgc
     2401 cgacgtgctc cacgacaagg tcgacgccgc gtttcttggt ccgcttaaga atttcgtcga
     2461 cgaagtcgac gttgttgtag ttgatgacct cgtcggcgcc gagctccttc gcccgctcga
     2521 gtttccaatc agcgctcgac gtggtgtaca cgtaggcgcc cgccagtttg caaatctgga
     2581 tggccgccat gctcacgccg gaactcgcgg aattcaccag caccgtctcg ccggcgcgca
     2641 agtcggcgcg atcgaccagc atatgccacg ccgttccgaa ggcgttggga aacgccgctg
     2701 cctgctcaaa cgtcacgctg tcgggcagcg ggatcaagtg atcggcgggc agcttgacat
     2761 actgcgcata agcgccgtgt tcgtgtgcgc cgagatagcg ataatcgctt gcacaccggt
     2821 tgtgatggcc cgccatgcac tgctcgcagc gcccgcacgg aagtatccac cagctcgtca
     2881 cgcgcgtgcc catcgcaagc tcgcacagcg tctccgggcc gagcgcaacg agttcgccgc
     2941 cgaagtctcc accaaggata tgcgggaact ttcccttgtt cggcttgtag cgtcccgcac
     3001 gcgccatcag gtcatagccg ttgagactca cggcgtggac tttgaccagc gcctcgccgc
     3061 gttcaagctt tggcacgcgg aaatcggtgt atcggagaac gtcggcgtcg ccatactgct
     3121 cgaaaatgac cgccttcatc tgcgttggga gcatttcacc tccacggagt gtcacattcg
     3181 acct
//
LOCUS       DATCWM010000174         8251 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_82544, whole genome shotgun sequence.
ACCESSION   DATCWM010000174 DATCWM010000000
VERSION     DATCWM010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8251)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8251)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8251
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82544"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(57..557)
                     /locus_tag="VIQ50_03295"
     CDS             complement(57..557)
                     /locus_tag="VIQ50_03295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phasin"
                     /protein_id="HEY9359432.1"
                     /translation="MTEAIETTTSKSKAKATSPATFDMPKFELPNFEMPKMEIPAAFR
                     EMAEKSVSQAKETYEKMKSAAEEATDVLEDTYAAATKGASDYGLKVIEVARANTNAAF
                     DFAGQLMTVKSLSEMVELSTAHTRKQFEALTAQSKELAAIAQKVAADSTEPVKESFGK
                     VFKKVA"
     gene            complement(801..1178)
                     /locus_tag="VIQ50_03300"
     CDS             complement(801..1178)
                     /locus_tag="VIQ50_03300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006940017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phasin"
                     /protein_id="HEY9359433.1"
                     /translation="MAASDRFEVPPELRTFAEKSVEQARQAFDGFISAAHHAMSAFEG
                     QAESARKGARDVTEKAMTFAERNMASAFEFAHELVRARDLQEVVRLQGDYIRRQMEAL
                     TEQARELGESTSKVAKDAAARRD"
     gene            1340..2509
                     /locus_tag="VIQ50_03305"
     CDS             1340..2509
                     /locus_tag="VIQ50_03305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008967978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HEY9359434.1"
                     /translation="MRIVDIRECAIPLKSEISNSSFDFSEMTTSVVAIITDVVRGGRP
                     VVGFAFNSTGRYACGAAMRARFVPRILGADPRSLLDETQENFDPEKILAVMMQREKSG
                     GHSERSIAIGTIEVAVWDAVAKIAGKPLHRLLAERYNGGTVARRVFCYVGGGWYAPGQ
                     TVKDLQDEMRRHLDAGYTMVKMKVGGLPLGDDVRRVEAVKAMLPSHAQLAVDANSKFA
                     RAEAFAYADALAPLRLRWFEEPCDPLDFALLAEIAARYAPPLATGENLFSMQDVENLV
                     RFGGLRAQRNDVIQVDPPQAYGIVQYARTVAMLERHGWPRSALFPHGGNQMALAIAAG
                     FGLGGAESYPGVFGPFGGFADDAELDGGYLTLTERPGIGFEGQSALYAIMRALAA"
     gene            2656..3414
                     /locus_tag="VIQ50_03310"
     CDS             2656..3414
                     /locus_tag="VIQ50_03310"
                     /inference="COORDINATES: protein motif:HMM:NF018420.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1194 domain-containing protein"
                     /protein_id="HEY9359435.1"
                     /translation="MVRLGTRTLVRCMLALAAFLWLSPAVGFAAEEVDLLLVLASDVS
                     RSVDHPKFLLQREGYAAAISDPHVLDAIKSGPHQRIALCFVEWSGFGAQKLVIDWSLV
                     DGPDAARKFGDQLLELPRSFADRTSISGGIEFAAAQLERAPFAGARRTIDVSGDGTNN
                     AGRDVKLARDEVIAKGIVINGLVILSDRPVPWNAEHTNPPGGLEKYYQDNVVGGPGAF
                     VLVAENFNSFGRAIIKKLIAEIALLPAEPHRLVR"
     gene            3513..4244
                     /locus_tag="VIQ50_03315"
     CDS             3513..4244
                     /locus_tag="VIQ50_03315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase subunit A"
                     /protein_id="HEY9359436.1"
                     /translation="MQKVYPDARAALAGLLKDGMMIMAGGFGLCGIPEQLILAIRDSG
                     VKNLTVVSNNCGIDGVGLGLLLDTRQIKKMISSYVGENKTFAQQYLADELEIEFNPQG
                     TLAERIRAGGAGIPAFFTRTGAGTQIAKGKEEREFEGERYIMERGLIADLSIVHAWMG
                     DTEGNLVYRKTARNFNPMMATAGKVTVAEVEHLVQPVEINPDHIVTPGIYVKRLVHVP
                     NAAKHIEQRTVRKRAAAPAGTGEEV"
     gene            4244..4900
                     /locus_tag="VIQ50_03320"
     CDS             4244..4900
                     /locus_tag="VIQ50_03320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012384140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase subunit B"
                     /protein_id="HEY9359437.1"
                     /translation="MAWTREQMAERAAKELRDGFYVNLGIGIPTLVSNYIPRGMSVQL
                     QSENGMLGFGPFPYEGEEDPDLINAGKQTVTEIPTTSYFSSADSFAMIRGGHIDLSIL
                     GAMQVAENGDLANWMIPGKMVKGMGGAMDLVAGVKKVVVVMEHSAKSEPKLLKRCTLP
                     LTGAGVVDMVITDLGVFTIDKRGGGGMTLVELAPGTTLEEIRSKTQASYHVANALAAA
                     "
     gene            5068..7050
                     /locus_tag="VIQ50_03325"
     CDS             5068..7050
                     /locus_tag="VIQ50_03325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HEY9359438.1"
                     /translation="MTAAVGIKRFGFAVAALTAAAIAALVILPLLMPADAVRKAVQAE
                     IRAVTGLDPVLRGQASVSLFPAGKVSFDDLILGDNRTGAPALAAEHMIARLRFFPLLL
                     GRIEIAEVSLVRPTIAIVFNADRSSNWSGHIETLAQNLKSGAGRPASFSEIRIADGTI
                     ILRDEAYEILETISNVEMALAWPSISRSFAATGRFTWHDEPIDATTSLTDFATALQGD
                     RSGLKIRLAGAPFKFAFDGYISHRPTLKMEGTLAADAPSLREALRWTGLYPPPGGGFG
                     RFALKAQTDVAGGIIALSGVNIELDGNVGEGVLTFDGRQTLQGTLATEGLDLTPYIST
                     IRLLTGGGRGWDRKPIALDGLDGVQLDLRLSAARVSVANARFGRTAVAANLRDGNLAV
                     AIGESQAFGGVVRGTFGLANSAAGAGLKAQLQFADVDLEQCLGALFGIRRLEGKGNLG
                     LAIDSAGRSVYDVTKGLNGTASLTSRKGAIAGFNVEQLLKRIERRPLSGSGEFRTGKT
                     SYDTLSVNLRIVQGVANVEDVRMEGSSVGLAVAGAASIPERDLDLRGTASLLAMSTSG
                     TAAPAFELPFMVQGSWDDPIILPDPQSRILHSGAAQPILDAVRNRGLRDPVRSAIERL
                     TGSAPQTPPALAGSSTPSGAQTPSTGDAVEPAQESR"
     gene            complement(7087..7899)
                     /locus_tag="VIQ50_03330"
     CDS             complement(7087..7899)
                     /locus_tag="VIQ50_03330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY9359439.1"
                     /translation="MRKASWFNVGSLALGLTFLYLPIAILVIYSFNASRLVTVWGGWS
                     LRWYAELLEDRAMLESAWVTLRIAVLSASAATVLGTLAAIALVRFGRFRGRVLFSGMI
                     YAPLVMPEVITGLALLLLFVAVDINRGFWTITIAHTTLITCFVTVVVQSRLLTFDTSL
                     EEAAMNLGCPPLKTFLTVTLPLIAPALASGWMLAFTLSLDDLVIASFTTGPGATTLPI
                     RIYSEVRLGVKPEINAICSILIAIVAAGITGASLLAKFQDVGRGGVADLAAR"
     gene            complement(7902..>8251)
                     /locus_tag="VIQ50_03335"
     CDS             complement(7902..>8251)
                     /locus_tag="VIQ50_03335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY9359440.1"
                     /translation="LYATLEKVDFSLLEAAADLGCPWWKAFWLVTVPLSLPGVIAGAL
                     LCFIPIVGEFVIPDLLGGSETVMIGKTLWTEFFANRDWPIASAVAVVLLCLLVVPIVV
                     YEQLQTRDLARGR"
BASE COUNT         1515 a         2664 c         2653 g         1419 t
ORIGIN      
        1 agcccgggcg gagagcccgg gccgcaacgc aaccttacga acgccgatcg cgagactcag
       61 gcgaccttct tgaacacctt accgaagctt tccttgaccg gctcggtgga gtcggcggcc
      121 accttctgcg cgatggcggc gagttccttg gattgagccg taagggcttc gaactgcttg
      181 cgcgtatgtg cggtcgaaag ctcgaccatc tcggagagcg acttcactgt catcaactgg
      241 ccggcgaaat cgaacgcggc gttggtattc gcgcgcgcca cctcgatcac cttgaggccg
      301 taatcggagg ctcccttcgt cgccgccgcg taggtatcct caagcacgtc ggttgcctct
      361 tcggcggcgg acttcatctt ttcgtaggtt tccttcgcct gcgagacgct cttctcggcc
      421 atctcgcgga acgcggcggg aatttccatc ttcggcatct cgaagttcgg gagttcgaac
      481 ttcggcatgt cgaacgtggc tggcgaagtc gccttggctt tggacttgga cgtggtcgtc
      541 tcgatagcct cggtcataga gtggatcctt tgcaggggcg acaattcggc ggtcgtacgg
      601 atccgcgccc acagccgatc cgcgcctggg atgacaagcg gcacggggcc gcccgcgcga
      661 ggtcggaaac accactgccg ttgctaaagt ggatataagc cccattttgg tgcaatgcaa
      721 cacaaatatt gcagcgcaca ataagtgccg acgagatcag cctttttccg ggttccagcg
      781 gtcaaatccc gcggaggggg tcaatccctc cgcgcagcgg cgtccttcgc caccttgctc
      841 gtgctctcgc cgagctctcg cgcctgctcc gtcagcgcct ccatctggcg cctgatgtag
      901 tccccctgta gccgcaccac ctcctgaagg tctcgcgccc gcaccaactc gtgcgcaaac
      961 tcgaatgcgc tcgccatgtt gcgctcggcg aaagtcatcg ccttttccgt gacatctctg
     1021 gcacctttcc gggcgctctc ggcctggcct tcaaaggcgc tcattgcgtg gtgcgccgcc
     1081 gaaatgaagc cgtcaaaggc ttgcctcgcc tgctcgacgc tcttctcggc aaacgtccgc
     1141 agttctgggg gaacctcgaa acggtcgctg gcggccatgg tcacctcctc gcgtgtgaac
     1201 cggcttacgc tggaacgccc gagatgggcg cgaacgtact gccgtcgctt ttccgcccac
     1261 gggctcgtgt gccacacggt atgccggcgg agccgtcgag cttgcggacc gcactctaac
     1321 aggaattgga ataaacccca tgcgtatcgt tgacatccgc gaatgcgcga tcccgctgaa
     1381 atcggagatc agcaattcga gcttcgattt ctccgagatg accacctcgg tcgtggcgat
     1441 catcaccgat gtcgtgcgcg gagggaggcc ggtcgtcggt ttcgccttca actcgacggg
     1501 ccgctacgcc tgcggcgcgg cgatgcgcgc acgcttcgtc ccgcgcatcc tcggcgccga
     1561 tccgcggtcc ctgctcgacg agacgcagga gaatttcgac ccggaaaaaa ttcttgccgt
     1621 catgatgcaa cgggaaaaat ccggcggcca cagcgagcgc tcgatcgcca ttgggacgat
     1681 cgaggtcgcg gtctgggacg cagtcgccaa gatcgccggc aaaccgctgc atcggctgct
     1741 ggccgagcgc tacaacggcg gcacggtggc acgcagggtc ttctgctacg tcggcggcgg
     1801 ctggtacgcc ccggggcaga cggtgaaaga tctgcaggac gagatgcgcc gccatctcga
     1861 tgccggttac accatggtca agatgaaggt cggaggtctg ccgctcggcg acgacgtgcg
     1921 acgggtcgag gcggtcaagg cgatgttgcc ttcccatgca cagctcgcgg tcgacgccaa
     1981 ctccaaattc gctcgcgcgg aggcgttcgc ctatgccgat gcgcttgctc ccttgcggct
     2041 gcgctggttc gaggagccgt gcgacccact cgattttgcc ttgctcgcgg agatcgcggc
     2101 gcgctatgcg ccgccgctgg cgaccggcga aaatctgttt tcgatgcagg acgtggaaaa
     2161 cctggtgcgc ttcggcggcc tgcgtgcgca gcgcaacgac gttatccagg tcgacccgcc
     2221 gcaggcttac ggcatcgtgc aatacgctcg caccgtcgcg atgctcgagc gccacggctg
     2281 gccgcgcagc gcattgtttc cgcacggcgg caatcagatg gcgctcgcca ttgccgctgg
     2341 tttcgggctc ggcggcgcgg aatcctatcc cggcgtattc ggccccttcg gcggctttgc
     2401 cgatgacgcc gagttggacg gcggctatct cacgctgacg gaaaggcccg gcatcggatt
     2461 cgaggggcaa tcggcgctct acgccatcat gcgggccctc gccgcctgac gccgtcaccc
     2521 gggaggccgc cacggcgccg tggaccaacg gacttccacg gcgccactgg cccatgcgca
     2581 atccgatcgg aatcggctat tgtgaagctg cggccgcgct gcagctgcaa ccgttgaggc
     2641 gcaggaggac acgacatggt ccggctcggg acccgcacgc tcgtgcgatg catgctggca
     2701 ctggcggcgt tcctttggct ctctccggcg gtcggctttg ccgcggaaga agtcgacctc
     2761 ttgctggtgt tggcgtcgga tgtctcgcgc agcgtcgacc atccgaaatt cctgctgcag
     2821 cgcgagggct acgctgcggc gatttccgat ccacacgtgc tcgacgcgat caaatccggg
     2881 ccgcaccagc gcatcgcgct gtgcttcgtc gaatggtcgg gcttcggcgc acaaaagctg
     2941 gtcatcgatt ggagcctcgt cgacggcccc gacgcggcac gcaaattcgg cgaccaactg
     3001 ctggaattgc cgcgttcgtt cgccgaccgc acctcgatca gcggcggcat cgaatttgcc
     3061 gccgcgcagt tggagcgtgc gccgttcgcg ggcgcgcgcc gcaccatcga cgtgtccggc
     3121 gacggcacca ataatgcggg ccgcgacgtg aagcttgccc gcgacgaagt catcgccaag
     3181 ggcatcgtca tcaatggtct ggtgatcctg agcgaccggc cggtgccgtg gaacgccgaa
     3241 cataccaacc cacccggcgg gctcgagaaa tactaccagg ataatgtcgt tggcggtccc
     3301 ggggcgttcg tcctggtcgc cgagaatttc aactcgttcg gtcgcgccat catcaagaaa
     3361 ctcatcgccg agattgcatt gctgccggct gagccgcatc gcttggtgcg ctgagacatt
     3421 gcaggctgcg ccccagcacg ctagacaatt ctcagggccg caggtgcagc gattgcgcgc
     3481 gctggcggcc cgcgatggaa gcaggcaagt ccatgcaaaa agtctatccc gatgcccgcg
     3541 ccgcgctcgc cggcctgctg aaggacggca tgatgattat ggccggcggg ttcgggctct
     3601 gcggcattcc cgagcagctc attctggcga ttcgcgactc gggagttaag aacctcaccg
     3661 tcgtctccaa caattgcggc atcgacggag tcggcctcgg cctcctgctc gataccagac
     3721 agatcaagaa gatgatctcg tcctacgtcg gggagaacaa gactttcgcg cagcaatatc
     3781 tcgcggacga gttggagatc gagtttaatc cgcagggcac gctcgccgag cgcatacgcg
     3841 ccggcggcgc cggcattccg gcgttcttca cgcgaacggg cgccgggacg cagatagcaa
     3901 aaggcaagga ggagcgcgaa ttcgagggcg agcgctatat catggagcgt gggctcatcg
     3961 ccgacctctc gatcgtgcat gcctggatgg gcgacaccga gggcaacctc gtctaccgca
     4021 agaccgcgcg caacttcaat ccgatgatgg ccacggccgg caaggtcaca gtggccgagg
     4081 tcgagcacct cgtgcagccg gtggaaatca atcccgacca catcgtcacg ccgggcatct
     4141 acgtcaagcg cctggtgcat gtgcccaatg cggccaagca catcgagcag cgaaccgtgc
     4201 gcaaacgcgc cgccgcaccg gcgggaaccg gagaggaagt gtaatggcct ggacacgcga
     4261 gcagatggcc gaacgcgccg ccaaggagct gcgcgacggg ttttacgtca atctcggtat
     4321 cggcatcccc acactggttt cgaactacat cccgcggggc atgagtgtgc aactgcaaag
     4381 cgagaacggc atgctcgggt tcggcccgtt cccgtatgaa ggcgaggagg atccggatct
     4441 catcaatgcc ggcaagcaga cggtcaccga gatcccgacg accagctatt tctcgtctgc
     4501 cgacagtttc gccatgattc gcggcggaca catcgacctg tcgatccttg gcgcaatgca
     4561 ggtggccgag aacggcgatc tcgccaactg gatgattccc ggcaagatgg tcaaaggcat
     4621 gggcggcgcc atggacctcg tggccggcgt caagaaggtc gttgtggtca tggagcattc
     4681 ggccaagagc gagcccaagc tgctcaagcg gtgcaccttg ccgctcacgg gagccggcgt
     4741 ggtcgatatg gtgatcaccg atctcggggt atttaccatc gataagaggg gcggtggggg
     4801 aatgaccttg gtcgagttgg caccgggcac gacgcttgag gagattcgca gcaagacgca
     4861 ggccagctat cacgtcgcca acgcgctcgc ggcggcataa gcgactgaaa ggacttcgaa
     4921 aatgcaggcc ggtcgggcgc gcggctggcc acagaagcgt cacagagcga ttgcaaggtc
     4981 gcaccatcag cttgcaggtt tgcacttcga tcttctccgg caatggccga ccggcttggt
     5041 cggcgaacat tgagacatag acgcgtcgtg accgcggccg ttggcatcaa acgttttgga
     5101 tttgctgttg cggcgctgac cgccgccgct atcgctgctc tcgtcatcct gccgctgttg
     5161 atgccggccg acgccgtgcg caaagcggtg caggccgaaa tccgcgcggt aactgggctc
     5221 gatccggtgc tgcgggggca ggcctccgta tcgctgtttc cggccggcaa ggtgagcttc
     5281 gacgacctga tcctgggcga caaccgcacc ggcgcgccgg ccttggcggc cgagcacatg
     5341 attgcgcgtt tgcgcttttt cccgcttttg ctcgggcgca tcgagatcgc ggaagtctcg
     5401 ctggtgcgcc cgaccatcgc catcgtcttc aacgccgacc gcagctcgaa ctggtcaggc
     5461 cacatcgaga cgctggcgca aaatctcaag tcgggagcgg gacggccagc ctcgttttcc
     5521 gagatccgga tcgccgacgg caccatcatc ctgcgcgatg aggcttacga aatcctggag
     5581 accatctcga atgtagagat ggcgctcgct tggccctcga tctcccgaag cttcgccgcc
     5641 accggccgct tcacctggca tgacgagccg atcgacgcca cgaccagttt gacggatttt
     5701 gctacggcgc tgcagggtga ccgatccggc ctcaagatcc gcctcgccgg cgcgcccttc
     5761 aagttcgcat tcgacggcta cattagccac cggcccacgc tcaagatgga gggcacgctc
     5821 gcggccgatg cgccttcctt gcgcgaggcg ctgcgctgga ccggcctgta ccctccgccc
     5881 gggggcggat tcggccgctt cgcgctcaag gcgcaaacgg acgtggccgg ggggatcatt
     5941 gcgctttcgg gcgtgaatat cgagctcgat ggcaatgtcg gcgaaggcgt actgaccttc
     6001 gacgggcggc aaaccctgca gggaaccctc gccaccgagg ggctcgatct tacgccctac
     6061 atttccacca ttcgtttgct gaccggcggc ggccgcggat gggaccgaaa gccgatcgcg
     6121 ctcgatggcc tcgacggcgt gcaactcgac ctcaggctct cggccgcgcg cgtcagtgtc
     6181 gcgaatgcca gattcgggcg caccgcggtg gcagccaacc tgcgcgacgg caatctcgcg
     6241 gtggcgatcg gcgagtcgca ggcgttcggc ggcgtggtca ggggcacgtt cgggctcgcc
     6301 aactcggcgg ccggagccgg tctgaaggcg cagctgcaat tcgccgacgt cgatctcgag
     6361 caatgcctcg gcgcattgtt cggcattcgc agactcgagg gcaaaggcaa tctcggtttg
     6421 gcgatcgaca gcgcgggtcg cagcgtctac gacgtgacca agggattgaa cggcacggcg
     6481 agcctcacca gccgcaaggg cgcgatcgcg ggattcaacg tcgaacagct gctcaagcgc
     6541 atcgagcggc ggccgctttc gggcagcggc gaattccgca ccgggaagac ctcttacgac
     6601 acgctctcgg ttaatctgag aatcgtccag ggcgtggcga atgtcgaaga cgtgcgcatg
     6661 gagggctcga gcgtcggtct cgcggtagcg ggcgcggcgt caatacccga gcgcgacctc
     6721 gatcttcggg gaaccgcgag cctgcttgcg atgtcgacga gcggcacagc ggcacccgcg
     6781 ttcgagctgc ctttcatggt gcagggctcg tgggatgacc cgatcatttt accggacccg
     6841 cagagccgca ttctgcactc cggcgcggcg cagcccattc tcgacgcggt gcgcaaccgc
     6901 ggcctgcgcg atccggttcg ctcggcgatc gagcggctga ccgggtcggc gccgcagacg
     6961 ccgccggcgt tggcgggaag ctccacgccg tccggcgcgc aaacgccgag cacaggcgac
     7021 gccgtcgagc cagcgcaaga gagccgctag ccggcattcc cgcgaggctc cgcggcagca
     7081 aacccgtcag cgcgcggcaa gatcggcgac gccgccgcgg ccgacatcct ggaatttcgc
     7141 gagcagcgag gcgccggtaa tgccggcggc gacgatcgcg atcaggatcg agcagatggc
     7201 gttgatttcc ggcttcacgc cgaggcgaac ctccgaatag atgcggatcg gcagcgtcgt
     7261 cgcgccagga cccgtagtga agctcgcgat cacgagatcg tcgagcgaca aggtgaaagc
     7321 gagcatccag cccgacgcca gcgccggcgc gatcagcggc agcgtcacgg tcagaaacgt
     7381 tttcaacggc ggacagccga gattcatcgc cgcttcttcg aggctcgtgt cgaacgtcaa
     7441 cagccgcgac tgcaccacca cggtgacaaa gcacgtgatc agcgtcgtat gggcgatcgt
     7501 gatcgtccag aagccgcgat tgatatcgac ggccacgaac aggagcagca gcgctaggcc
     7561 ggtaatcacc tccggcatca ccagcggcgc atagatcatg ccggaaaaca gcacgcggcc
     7621 gcggaagcgg ccgaaccgca ccagcgcaat ggccgcgagc gtgccaagca ccgtcgccgc
     7681 gctcgccgac aggacggcga tgcgcagcgt cacccaggcg gattcgagca tggctcggtc
     7741 ctcgaggagc tcggcatacc aacgcagcga ccagccgccc cacacggtga cgagccgcga
     7801 ggcattgaag gagtagatca ccaggatcgc gatcggcaga taaagaaagg taagccccag
     7861 cgcgagcgag ccgacgttga accaagacgc cttgcgcatg gtcagcgtcc ccttgcgaga
     7921 tcgcgcgtct gcagctgctc gtagacgaca atcggcacga ccagcaggca gagcagcacg
     7981 acggcgacgg cggaggcgat cggccagtcg cggttggcga agaattcggt ccacagggtc
     8041 ttgccgatca tcacggtttc cgacccgccg agcagatcgg ggatgacgaa ctcgccgacg
     8101 atcggaatga agcagagcag tgcgcccgcg atcacgcccg gcagcgacag cggcacagtc
     8161 actagccaga acgccttcca ccacggacag ccgagatcgg cggcggcttc gagcagcgaa
     8221 aaatccacct tctccagcgt cgcgtagagc g
//
LOCUS       DATCWM010000175         3307 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_17722, whole genome shotgun sequence.
ACCESSION   DATCWM010000175 DATCWM010000000
VERSION     DATCWM010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3307
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17722"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..198
                     /locus_tag="VIQ50_03340"
     CDS             <1..198
                     /locus_tag="VIQ50_03340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007601389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9359441.1"
                     /translation="KIVLIVELLGRPNGVGFEIGVAFQLFDVTRILAYALAFIAVMLA
                     IETFLVQPLERHVARWRPRPA"
     gene            167..913
                     /locus_tag="VIQ50_03345"
     CDS             167..913
                     /locus_tag="VIQ50_03345"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9359442.1"
                     /translation="MSPAGVRGRLDVNIKQKSFRAASGGNLQVLGELVFSLGRGEVAA
                     LVGPSGCGKTTLLRIVAGLDRDFDGNVAFPGHGTLAMVFQEPRLLPWRTVEQNVQLAA
                     PRATGASLEMLFQTLALKAHRDHYPGELSLGLARRVALARAFAVEPDLLLLDEPFVSL
                     DDALAARLREELAELVNRRPVTTLLVTHNVDEAIELADRLLLLSISPARILADVPVAR
                     PRATRTAAELAALRDEIARRLDQPFSEANP"
     gene            1094..2779
                     /locus_tag="VIQ50_03350"
     CDS             1094..2779
                     /locus_tag="VIQ50_03350"
                     /EC_number="1.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
                     /protein_id="HEY9359443.1"
                     /translation="MKAFASAVCVLSLLGTGAAAQTFDDLKKDGNGGPTDNILTYGMG
                     YHQQRYSPLKQINKQTVKRLVPVWSVSLDNNWGEQAQPIIYNGVMYVTNAKATVAIDV
                     ATGKQIWKQTLDWPPETPRVICCGVSNKGAAIYNGKVFRTTLDAHVIAYDAKDGKELW
                     KSKAAEWREGYSLTVAPLVVNGVLVTGISGAEFGIRGFIDGWDTETGKHLWRRYTIPA
                     RGEKGNETWPQDNNAWEVGGGSAWITGSYDPELDLMYWGIGNPAPWASQSRDGDNLYT
                     SSVLAMRPMTGEIVWYYQFTPTDAYDYDACWELINADIDIGGQKRKVVMQLNRNGFLY
                     VLDRTNGKLLAANAFEKVNWASHVDKETGRPIETEIAKSIRAGKPTEHWPSTRGGKNW
                     PHAAFNPETGLLYANTLHEGRMYQHLEIKPYVVGQRYQFVDNLPLPRAAEEPIGHMEA
                     IDPLTAQKKWRTPLMDFQIWSAMLATGGGLLFTGKETGEFIAVDADTGKIVWQFQTGS
                     GINAMPVTYTHQGRQYITVLSGVGGLYWNIARERLKDSVPQGGSVWTFALLPE"
     gene            2809..3132
                     /locus_tag="VIQ50_03355"
     CDS             2809..3132
                     /locus_tag="VIQ50_03355"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEY9359444.1"
                     /translation="MPGARLVGLPIILACLVIGIPAAEAQSSSKDQIGTGAELYAVNC
                     SPCHGAHMQDPGAAFNLRKFPPDQHERFINAVSRGKNQMPPWGDFFKPEQLEALWAYV
                     MAGER"
BASE COUNT          647 a         1029 c         1029 g          602 t
ORIGIN      
        1 aagatcgtgc tcattgtcga gctgctcggg cgtccgaacg gcgtcggttt cgagatcggg
       61 gtcgcgttcc agctgttcga cgttacgcgc atactggcct atgctctcgc cttcatcgcc
      121 gtcatgctgg caatcgaaac gtttctggtg cagccgcttg aacgacatgt cgcccgctgg
      181 cgtccgaggc cggcttgacg tcaacatcaa gcaaaagtct tttcgcgccg cctccggcgg
      241 gaacctgcag gtgctcggcg agcttgtgtt cagcctcggc agaggagagg tcgccgcgct
      301 ggtcgggccc tccggatgcg gaaagaccac gctgctgcgg atcgtcgccg ggctcgaccg
      361 tgatttcgac ggaaacgttg cgttccccgg ccacggcacg cttgccatgg tgttccagga
      421 gccacgcctg ttaccgtggc gcacggtcga gcagaacgtg cagctcgccg cgccgcgggc
      481 gacgggtgcc agcctcgaga tgctgttcca gacgcttgcc ctcaaggctc atcgcgacca
      541 ctatcccggc gaactttcgc ttgggctcgc tcggcgggtg gcgctggcgc gggccttcgc
      601 ggtcgagccc gatctgcttc tcctcgacga gccattcgtg tcactcgacg acgcacttgc
      661 agcacgactg cgggaagagc tcgccgaact cgtcaaccgc cggcctgtta ccacgctgct
      721 ggtgacgcac aacgtcgatg aggcaatcga actcgccgac cggctgcttc tgctgtcaat
      781 cagtcctgca cggatcctcg ccgatgttcc ggtcgcacgc ccgcgcgcga cgcgcacggc
      841 ggccgaactc gcagccctgc gcgacgagat cgcgcggcgg ctcgatcagc cattttccga
      901 ggcaaatccc tgaccgtcga tgctggtcga gtgttctgcc ggcagagcgc accgactgta
      961 cgccgggcaa tccacggcgt catccccttc gaggccctcg acggtcggcg ccaatgcatt
     1021 attctctcct gcaacaggtc gggtcaaccg atcgccagtg gggccgagaa cggcttattt
     1081 atggagggac cccatgaagg ctttcgcatc ggccgtatgt gtcctgtcgc tgcttggcac
     1141 cggtgccgca gcgcagacat ttgatgacct taagaaggac ggcaatggcg gcccgactga
     1201 taacattctc acctatggca tgggctatca ccaacagcgc tatagcccgc ttaagcagat
     1261 caacaagcag actgtaaagc gtttggtgcc ggtgtggagt gtcagccttg acaacaattg
     1321 gggcgagcag gcgcagccga tcatctacaa cggcgtgatg tacgtcacca acgccaaggc
     1381 gaccgtcgcg atcgacgtcg ccaccggcaa acagatctgg aagcagacgc tcgattggcc
     1441 gccggagacc ccgcgcgtta tctgttgcgg cgtctccaac aaaggcgcag cgatttacaa
     1501 cggcaaggtc tttcgcacca cgctggatgc tcacgtcatc gcttacgatg cgaaagatgg
     1561 taaggagctg tggaagtcga aggcggcgga atggcgggag ggctattcgc ttaccgttgc
     1621 gccgctggtt gtgaatgggg tgttggtgac cggcatttct ggcgccgagt ttggcattcg
     1681 cggcttcatc gacggctggg ataccgagac cggcaagcac ctgtggcggc gatataccat
     1741 ccccgcccgc ggcgaaaagg gcaacgagac gtggccgcag gacaacaatg cctgggaggt
     1801 cggcggcggc tcggcctgga tcaccggttc gtacgatccc gagctagatt tgatgtattg
     1861 gggtatcggc aatccggcgc catgggcatc gcagagccgc gacggcgata atctctacac
     1921 ctcgtcggtg ctggcgatgc ggccgatgac cggcgagatc gtctggtact accagttcac
     1981 gcccactgac gcctacgact acgacgcttg ctgggaactg atcaacgccg acatcgacat
     2041 tggcggccag aagcgcaagg tggtcatgca gctcaaccgc aacggattcc tttacgtgct
     2101 cgaccgcacc aacggcaaac tgctggcggc gaatgcgttc gagaaagtga actgggcgag
     2161 ccacgtcgac aaggagaccg gtcggccaat cgagaccgaa atcgccaaga gcatccgcgc
     2221 cggtaagccg accgagcatt ggccctcgac gcgcggcgga aaaaactggc cgcacgcggc
     2281 attcaacccg gagaccggcc tgctctacgc caacacgctc cacgaaggga gaatgtacca
     2341 acacctggag ataaagcctt acgtagttgg ccagcgctac caattcgtcg acaacctgcc
     2401 gctgccgcgg gcggccgaag aaccaatcgg ccacatggag gccatcgatc cgctcaccgc
     2461 gcagaagaag tggcgaactc cgctgatgga ttttcagatt tggtcggcga tgctggcgac
     2521 cggcggcggt ctgctgttta ccggaaagga aacgggcgaa ttcatcgccg tcgatgccga
     2581 caccggcaaa atcgtttggc agttccagac cgggtcaggc atcaacgcaa tgccggtcac
     2641 ctacacgcat cagggccggc aatacatcac cgtgctgtcc ggcgtcggcg ggctttactg
     2701 gaacatcgcc cgtgagcggc tcaaggactc ggtgccgcaa ggtggatcgg tttggacctt
     2761 cgcgctcttg ccggagtagg cgaattgcat cacaactcaa cgtacgaagt gcctggcgcg
     2821 aggctggtcg ggttgccgat catcctcgcg tgtctcgtta tcggcatacc ggccgccgaa
     2881 gcgcaaagct cctccaagga ccagatcggg accggggccg agctctacgc cgtcaactgc
     2941 tcgccgtgtc acggcgcgca catgcaggat cccggtgcgg cattcaatct gcggaaattt
     3001 ccacccgacc agcacgagcg cttcatcaac gcggtgagtc gtgggaagaa ccagatgccg
     3061 ccatggggcg atttcttcaa gcccgaacag cttgaggcgc tgtgggcgta tgtcatggcg
     3121 ggagagcgat gacctattcc atcctcgccc tgagcagcat cctcgtcagc acgacgcggg
     3181 cctaggcaat catagcttcg cgcgcatccc gacatagacc gagagcggct gcgccggcgt
     3241 gaccgtgcgg gggtcgttca gcacgttcgg tatcgcgacc gcgacagtcg attgcgtatc
     3301 gaagaaa
//
LOCUS       DATCWM010000176         4386 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_525218, whole genome shotgun sequence.
ACCESSION   DATCWM010000176 DATCWM010000000
VERSION     DATCWM010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4386)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4386)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4386
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_525218"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            199..603
                     /gene="mutT"
                     /locus_tag="VIQ50_03360"
     CDS             199..603
                     /gene="mutT"
                     /locus_tag="VIQ50_03360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007604557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="8-oxo-dGTP diphosphatase MutT"
                     /protein_id="HEY9359445.1"
                     /translation="MSVNLLLVAACALIDPDARVLIAQRPTGKPMAGLWEFPGGKVEA
                     GERPENTLIRELKEELGIVVDETCLAPLTFASHGYPDFHLLMPLYVCRRWQGTVTPLE
                     GQTLAWVRPNRLREYPMPPADEPLIAHLMTLL"
     gene            complement(641..1576)
                     /locus_tag="VIQ50_03365"
     CDS             complement(641..1576)
                     /locus_tag="VIQ50_03365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012452322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEY9359446.1"
                     /translation="MVSPRPIIFDRARQRAYRARAAALGPSTFLIERVAEDLRDRLAA
                     VLRRFDCALDLGTPSDAVRRVLAESGKVGTIIAAEASAGSAASWRLDRGDAPSGAQLA
                     VAADEEVLPFRDASLDLVVSALALQFVNDLPGALIQIRRALKPDGLLLAALAGGETLT
                     ELRQAFAAAEAEIEGGISPRVIPFPDVREMGALLQRAGFALPVTDVDRVTARYPSPTS
                     LMHDLRRMGATNALRERSRRPLKRATVRRMIEIYAERFADRDGRIRATFEIIWLSGWA
                     PHESQQKPLAPGSARRRLANALGTKETRLPRNGDR"
     gene            1690..2480
                     /locus_tag="VIQ50_03370"
                     /pseudo
     CDS             1690..2480
                     /locus_tag="VIQ50_03370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018327058.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
     gene            2508..2798
                     /gene="grxC"
                     /locus_tag="VIQ50_03375"
     CDS             2508..2798
                     /gene="grxC"
                     /locus_tag="VIQ50_03375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012317071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HEY9359447.1"
                     /translation="MIEIYTTRYCPYCHAAKRLLSRKGVDFTEIDVSGDAKRRSEMVA
                     RANGRMTVPQIFIGSTHVGGYDDLAALDRAGKLDPLLGREHAAAATGKRPSA"
     gene            2795..3679
                     /locus_tag="VIQ50_03380"
     CDS             2795..3679
                     /locus_tag="VIQ50_03380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HEY9359448.1"
                     /translation="MNTGKAATFTAGLVQMRSGLSPQANLDAAVRLIEDAKNAGADYV
                     LTPEMTNILEIKRERLFATIAPEEDDPTLAALRELARKLGIFLHVGSLAIKVLPEKAA
                     NRSFLIDRNGDIVARYDKIHMFDVELDGGESYRESRNYRAGEIGVAADLPWGRLGLTI
                     CYDLRFPALYRALAEAGCSFLAIPSAFTKQTGEAHWHALIRARAIENGAFVLAAAQGG
                     KHENGRETFGHSLVVDPWGRILAEGGSEPGVILAAIDPAEVTAARAKIPSLQHGRRFE
                     IIEPMAEPAHLRAVRGLS"
     gene            3676..4161
                     /locus_tag="VIQ50_03385"
     CDS             3676..4161
                     /locus_tag="VIQ50_03385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1178 family protein"
                     /protein_id="HEY9359449.1"
                     /translation="MIRYALACDKGHVFESWFQNSAAYDTQVKAALITCPVCNSAKVE
                     KTLMAPGVVGAKKRAGAPPASPPSPRPAADTADTSTPVAMMSPQEQEFRKKLKELRDH
                     LTKNADYVGQKFPEEARKMHYGDIEHRSIYGEASPDQAKELHEEGIEFHPLPVLPDER
                     N"
     gene            complement(4235..>4386)
                     /locus_tag="VIQ50_03390"
     CDS             complement(4235..>4386)
                     /locus_tag="VIQ50_03390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EamA/RhaT family transporter"
                     /protein_id="HEY9359450.1"
                     /translation="AASVRTLALVEVLFAQAISHFVFKQAMTAREAAGIMLIVLGVAL
                     LLWAH"
BASE COUNT          755 a         1499 c         1446 g          686 t
ORIGIN      
        1 taggtcgcgg ccgcgaccgg gtgctgacct gcgatctgac caaagactac gtcgccatca
       61 acggcgacta tcgctcctga gcggcgcgcg aggttgctcg gtgtccccat ccattcctcg
      121 cggcgctgcc gctgatggtg accctcatcg gcggagacct cggcaatcgg cgctcttgcg
      181 ccctcgatct agaagctcat gagcgtgaac ctcctccttg tcgccgcctg cgcgcttatc
      241 gatccggacg cccgcgtgct gatcgcgcag cggccgaccg ggaagccaat ggccgggcta
      301 tgggaatttc ctggcggcaa ggtcgaggcc ggcgagcggc cggagaatac gctcatccgc
      361 gagctcaagg aggaactggg aattgtcgtc gacgagacgt gcctcgctcc gctcaccttc
      421 gccagccacg gctatccgga tttccatctg ctgatgcccc tctatgtctg ccggcgctgg
      481 cagggaacgg tcacgccgtt ggaaggccag acgttggcat gggtgcgccc aaaccgattg
      541 cgggagtacc cgatgccacc tgccgacgag ccgctgatcg ctcacttgat gacgctgttg
      601 tgagcgcgca ggcacgaaac gtcggcggcc tggaacctga ctagcggtcc ccgttgcgcg
      661 gcagccgggt ctccttggtc ccgagtgcat tggccaatcg tcggcgcgcc gagccaggcg
      721 cgagcggctt ctgctggctt tcgtgcgggg cccagccgga gagccagatg atctcgaagg
      781 tcgcgcggat acggccatcg cgatcggcga aacgctcggc gtagatctcg atcatccgtc
      841 tcacggtcgc gcgcttgagc ggccgccggc tgcgttcgcg cagggcattc gtcgcgccca
      901 tgcggcgcag gtcgtgcatc aacgaggtcg gcgatggata acgcgccgtc acccgatcga
      961 catcggtcac cggcagcgcg aagcccgcgc gctgaagtag cgcacccatc tcgcgcacgt
     1021 ccggaaaagg aataacgcgc ggcgagatgc cgccctcgat ctcggcctcc gccgccgcga
     1081 aggcttgccg cagctcggtc agcgtctcgc cgccggcgag cgccgccagc aataggccgt
     1141 cgggtttgag cgcgcggcgg atctggatga gcgcgccggg caggtcgttg acgaactgca
     1201 gcgcaagggc cgacacaacc agatcaagcg acgcgtcgcg gaacggcaag acctcctcgt
     1261 cggccgcaac ggcaagctgc gcgcccgatg gcgcgtcgcc gcggtcgaga cgccaagacg
     1321 cggcgctacc ggctgacgcc tcggcggcga tgatggtgcc taccttcccg ctctccgcca
     1381 gcacccgacg gaccgcgtcg cttggcgtgc cgaggtcgag cgcgcaatcg aagcggcgaa
     1441 gcaccgcggc gagacgatcg cgcagatctt cggccacgcg ctcgatcaga aaggtcgatg
     1501 ggccgagcgc cgctgcacgc gcgcgatacg cgcgttggcg cgcgcggtcg aagatgattg
     1561 ggcgcggcga aaccatcgtc ttgcttaaca cgcccgtagc gcgcagacga cagaggctgc
     1621 acgcctcacc tgcgcgtcga tcgccccgat gccgttgagg tcggcaacgc caggcattag
     1681 cgtaacgcga tgcaggggga gaccgccgag atcccggcca agcgctttgc ccgactgaag
     1741 ggcgcgttgc gcgcgagctt cggcctgctc gtcgacgtag cgctgccgca actctgcccc
     1801 agctgtcgcg agccggtcga cggcgcgggg ctgtgtcccg cctgctggtc caagctctcg
     1861 ttcatcgcgc cgccctattg cgagcggctc ggcattccgt tccccttcga tggcggaccc
     1921 ggtctgttgt cgatggaggc gatcgccgat ccgcccacgt atcaccgcgc ccgcgccgcc
     1981 gtgcgctacg acgacatcgc gcgcaaactc gtccatgcct tgaagtatgg cgaccggctc
     2041 gaccttgcgc cgaccatggg gcgctggatg gcgcatgccg gccgcgagct catcgccgac
     2101 gccgatgcgc tgcttccggt accgctgcat tggcgccggc aatgggcgcg acgcttcaat
     2161 cagtcggcgg tgctcgccca tatcatcgcc gagacgagcg gcaaaagcgt cgcccatggg
     2221 gcgctcaagc gggtgaaggc aacgccgcag caagtcggcc tcgaaagtcc gagcgggcgc
     2281 acaacgtcca gggcgccttc cgcgtgccgg gcgcgggcaa ggccgaggtg gtggggcgaa
     2341 agctgctgct ggtcgacgac gtgctcacct cgggcgccac ggtcgatgcc tgcgcacggg
     2401 cattgttgcg ggccggcgcc gccggcgtgg acgtgctggt attcgcgcgg gttgtggcgg
     2461 ggagccgccc tcccatataa agcaatcggt aagccggacc gggcatcatg attgagattt
     2521 acaccacccg ctactgccca tattgccacg cggccaagcg gctgttgtcg cgcaagggcg
     2581 tcgacttcac cgagatcgac gtcagcggcg acgcgaaacg gcgaagcgag atggtggcgc
     2641 gcgcaaatgg acgcatgacg gtgccgcaga ttttcatcgg ctcgacccat gtgggcggct
     2701 atgatgacct cgccgcgctc gatcgggcgg gcaagctcga tccgctgctc ggccgcgaac
     2761 atgcggccgc ggccaccggc aaaaggccct cagcatgaac acaggcaagg ctgcgacctt
     2821 caccgcaggt ctcgtgcaga tgcgctcggg cctgtcgccg caggccaacc tggatgccgc
     2881 ggtgcggctg atcgaggatg ccaagaacgc cggcgccgat tacgtgctca cgccggagat
     2941 gaccaacatc ctggagatca agcgtgagcg gctgttcgcg acgatcgcgc ccgaggagga
     3001 cgatcccacc cttgccgccc tgcgcgagct tgcacgcaag ctcggcatct tccttcacgt
     3061 cggctcgctg gcgatcaagg tgctgccgga aaaggcggcg aaccgctctt tcctgatcga
     3121 ccgcaacggc gatatcgtcg cgcgctatga caagatccac atgttcgatg tcgaactcga
     3181 cggcggcgag agctatcgcg aatcgcgcaa ctaccgcgcg ggcgagatcg gcgtcgcggc
     3241 cgatctgccg tggggacggc tcgggctgac catctgttat gatctgcgct tccccgccct
     3301 ttaccgcgcg ctcgccgaag ccggctgctc gtttctcgcc attccctcgg ccttcaccaa
     3361 acaaaccggc gaagcgcact ggcatgcgct gatccgcgcc cgtgcgatcg agaacggcgc
     3421 cttcgtgctg gcggccgcgc aaggcggcaa gcacgagaac ggtcgcgaaa cgttcggcca
     3481 ttccctcgtc gtcgacccgt ggggccgcat tctggccgaa ggcggcagcg agccaggcgt
     3541 gatcctggcc gcgatcgatc ccgccgaagt cacggccgcg cgcgcgaaga tcccctcgct
     3601 gcaacatggt cggcgcttcg agatcatcga gcccatggcc gagccggctc acctgcgcgc
     3661 agtgcgaggc ctctcatgat ccgctacgcg ctggcgtgcg acaaagggca cgtgttcgaa
     3721 agctggttcc aaaactcggc cgcctacgac acgcaggtca aggccgccct gatcacctgc
     3781 ccggtttgca attccgccaa ggtggaaaag acgttgatgg ccccgggtgt cgtgggcgcg
     3841 aagaaacgcg cgggtgcgcc gccggcctcg ccgccttcgc cgcgcccagc cgccgacact
     3901 gccgacacct ctactccggt cgcgatgatg tcgccgcagg agcaagagtt tcgcaagaag
     3961 ctgaaggagc tgcgcgacca cctgacaaag aacgccgact atgtcggcca aaagtttccc
     4021 gaggaagcgc gcaagatgca ctacggcgac atcgagcatc gctcgatcta cggcgaggcc
     4081 tctcccgatc aggccaaaga attgcacgag gaggggatcg agttccaccc gctgcccgtg
     4141 ctgccggacg agcgcaatta gcgaagctat ccgcggcagc gtgacgccgt cgcggctcgg
     4201 ccggcgaccg cagcctgacc ccccggcctg atcgtcaatg cgcccacagc aacagcgcca
     4261 ccccgagtac gatcagcata atgccggcgg cttcgcgcgc ggtcatcgcc tgcttgaaca
     4321 cgaaatgtga aatcgcctgt gcgaacagca cttcgaccaa cgccagcgtg cgcacgctcg
     4381 cggcgg
//
LOCUS       DATCWM010000177         2321 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_519786, whole genome shotgun sequence.
ACCESSION   DATCWM010000177 DATCWM010000000
VERSION     DATCWM010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2321)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2321)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2321
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_519786"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1627
                     /locus_tag="VIQ50_03395"
     CDS             <1..1627
                     /locus_tag="VIQ50_03395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-2-macroglobulin family protein"
                     /protein_id="HEY9359451.1"
                     /translation="AAAGNATVIVRVSGPDGFALERSYALPVRPATQILARRTVKPLA
                     KGESLSLSNDLFADLVPGSASVALSVGVSNALDAAALLAALDRYPFGCSEQITSRTLP
                     LLYVNDLASGAHLALDTAVDQRIRESIDRLLARQGANGSFGLWSAGGDDVWLDAYVTD
                     FLTRAREHGFAVPDIGFKLALDRLRNFIANADDPAKDGGRNLAYALYVLARNGAAPIG
                     DLRYFADTKLEAIATPIAKAQIAAALDMLGDRPRAERVYAAALASIAPRPVLDYGRSD
                     YGSALRDAAALVTLASEGGAPRATVTGAVERVEAARNLTPYTSTQENAWMVLAARALA
                     RDAQTISLEVNGEKTQGALNRTLRPSDLQQPLQVTNVGDGAAQAVVTVSGAPIVPEPA
                     AEKGFKIERKYYTLAGTPADPTKAKQNDRFAVVLKITEPQPQFGRIIVADYLPAGFEI
                     DNPRLVSSGDTGTLAWIEDAQEPVNAEFRDDRFSAAFQRKSDNPSVFTVAYVVRAVSP
                     GRYVHPQAYVEDMYRPDRFGRTATGMIEVTASK"
     gene            1720..>2321
                     /locus_tag="VIQ50_03400"
     CDS             1720..>2321
                     /locus_tag="VIQ50_03400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011502962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HEY9359452.1"
                     /translation="MPSVIVAFLCSAAYWISALGPPPLGKALTFSTLVVDRDGKLLRP
                     YATPEGRWRMPATRENVDPRFLQLLLAYEDKRFSAHHGIDPLALGRAFAQLITHGRIV
                     SGASTLTMQVARLLEPRAERSFSAKLRQMVRAVEIERALSKDEILALYLSLAPYGGNL
                     EGVRAASLAYFGKEPRRLTPGEGAMLVALPQSPERRRPDRA"
BASE COUNT          374 a          797 c          749 g          401 t
ORIGIN      
        1 ggccgccgcc ggaaatgcca cggtgatcgt gcgcgtcagc gggccggacg gattcgcgct
       61 cgagcgcagc tacgcgctgc cagtgcggcc tgcgacgcaa atccttgcac gccgcaccgt
      121 caaaccgctg gccaagggag aaagcctttc gctctcgaac gatctgttcg ccgacctcgt
      181 gccgggcagt gcgagcgtcg cgctgtcggt gggggtttcc aatgcgctgg atgcggcggc
      241 gctgctggcg gcgcttgacc gctacccgtt cggatgttcg gagcaaatca cgagccggac
      301 attgccgctc ctttacgtca acgatctcgc aagcggcgca caccttgcgc tcgacaccgc
      361 cgtcgatcag cgcatccgcg agtcgatcga tcgcctgctg gcgcgtcaag gcgccaacgg
      421 ctcgttcggc ctgtggtctg ccggcggcga tgacgtctgg ctcgatgcct acgtcaccga
      481 tttcctgaca cgcgcgcgcg agcatggctt tgccgtgccc gatatcggct tcaagctcgc
      541 gctcgatcgc ctgcgtaatt tcatcgccaa cgcagacgac cccgcgaagg acggcggacg
      601 taatcttgct tatgcgctct acgtgttggc gaggaacggc gccgcgccga tcggcgatct
      661 gcgctacttt gccgacacga agctcgaggc tattgcgacc ccgatcgcca aggcgcagat
      721 cgccgccgcg ctcgacatgc tcggcgatcg tccgcgcgcc gaacgcgtct atgcagcggc
      781 gctcgcgtcg atcgcgccgc gcccagtgct cgactacggc cgcagcgact atggttcagc
      841 gctgcgcgat gcggccgcgc tggttacgct tgcgtccgag ggcggcgcgc cgcgagcaac
      901 cgtgaccggg gcagtcgagc gcgtcgaggc cgcgcgcaat cttacccctt atacctcgac
      961 gcaggagaac gcatggatgg tgctcgcagc gcgcgcgcta gcgcgcgacg cgcagacgat
     1021 ctcgctcgag gtgaacggtg agaagacgca aggcgcgctc aatcgcaccc tgcgtccgag
     1081 cgacctgcag cagccgctgc aagtgacaaa tgtcggcgac ggcgcggcgc aagccgtcgt
     1141 caccgtgtcg ggtgcgccaa tcgtgccgga gcccgccgcc gagaagggct tcaagatcga
     1201 gcgtaaatat tacacgcttg ccggcacgcc cgccgatcca accaaggcca agcagaatga
     1261 ccgctttgcg gtcgtgctga aaatcaccga gccgcagccg cagttcggac ggatcatcgt
     1321 cgccgattac ctgccagccg gctttgagat cgacaatccg cggctggtgt cttccggcga
     1381 caccggcact ctcgcctgga tcgaggatgc ccaggaaccg gtgaacgccg agttccgcga
     1441 cgaccgcttc agcgcggctt tccagcgcaa gagcgataat ccgtcggtgt tcaccgtcgc
     1501 ctacgtggtg cgcgccgtct cgcccggacg ctatgtgcat ccgcaagcct atgtggagga
     1561 catgtatcgg cccgaccgtt ttggtcgtac cgctacgggc atgatcgagg tcacggcatc
     1621 gaaatgaggt cgggagcaaa tcccgtgcgc cctctgcctc ccccgctgca agggactggg
     1681 cgcctgccgc gctggcggcg acggttgggc ctcattgctg tgccgagcgt gatcgtcgct
     1741 ttcctgtgct cagctgcgta ttggatctcc gccctcgggc cgccgccgct gggcaaggcg
     1801 cttacattct ctaccctcgt cgtcgaccgc gacggcaagc tgctgcggcc ctacgccacg
     1861 ccggaagggc gctggcgaat gccggcgacg cgcgagaacg tcgatccgcg gttcttgcag
     1921 cttctgctgg cctacgagga taaacgcttc agcgcgcatc acggcatcga tccgctcgcg
     1981 ctcggccgcg ctttcgcaca gctaatcacc cacgggcgca tcgtctccgg cgcctcgact
     2041 ctcaccatgc aggtcgcgcg gttgctcgag ccgcgtgctg agcgcagctt cagcgcaaag
     2101 ctgcggcaaa tggtgcgtgc ggtcgagatc gagcgcgcct tgtcgaagga cgagatcctc
     2161 gcgctctatc tgagcctcgc accctatggc ggcaatctcg aaggcgttcg cgcggcctcg
     2221 ctcgcctatt tcggtaagga accgcgccga ctgacgcccg gcgagggcgc catgctggtc
     2281 gcgttgccgc aatcgccgga gcggcgtcgc cccgaccggg c
//
LOCUS       DATCWM010000178         3104 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_293202, whole genome shotgun sequence.
ACCESSION   DATCWM010000178 DATCWM010000000
VERSION     DATCWM010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3104
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_293202"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..846)
                     /locus_tag="VIQ50_03405"
     CDS             complement(<1..846)
                     /locus_tag="VIQ50_03405"
                     /inference="COORDINATES: protein motif:HMM:NF013143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEY9359453.1"
                     /translation="MLEDVLAFAALPLAAAVVFTGIHTWFGLQVLRRNVVFADLALAQ
                     VSALGATVAVVAGHALQSPAGYAYTLAFTVAGALLLTASRGLARSVRQEAFIGVLYVF
                     ATAATVLVVDRSPQGAEHVKKMLVGGILSVTGDELLKFVVLYGIIGALHWLIRRPLLA
                     AAGSEDGRNGVGKVLGWDLVFYLSFGVVVTSSVATAGVLLVFCFLIVPALVGNLFSSH
                     VGVALVIGWIAGAVASAAGIFGSFLIDAPTGAVTVLAFAATLLIAGAIRAFVTAPATQ
                     RRRNRR"
     gene            complement(853..1827)
                     /locus_tag="VIQ50_03410"
     CDS             complement(853..1827)
                     /locus_tag="VIQ50_03410"
                     /inference="COORDINATES: protein motif:HMM:NF013465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HEY9359454.1"
                     /translation="MPAGDGRRNPHVARARLLARAALASIIASFLVSAPVSARTLRIV
                     ATTSDLASLAQAVAGDLAQVETIIPPGADAEAFEPRPSDLARLKGASIVIRVGLGYDH
                     WLDKLLAMHGDADVNRGGAGYVDASVGIPLLEVKGSPLDPTARDGHAHGLANPHYWLD
                     PANAETISGGIAEAGIRVAPEMAEKMIANRDNFLSRLKTSLARWEQLLAPHRAARLIA
                     YHNTWPYFARRFRLNIVDVIEVKEGIAPSPARLARLAAVMREQKIRVIVHEPFEPEEA
                     SQLLARRTGAEVVKLAPSVGSVPDANGYLALFDYNVGTLAQALSTASN"
     gene            complement(1814..>3104)
                     /locus_tag="VIQ50_03415"
     CDS             complement(1814..>3104)
                     /locus_tag="VIQ50_03415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HEY9359455.1"
                     /translation="TAIRAQQQPAPAAPPTQAVPPIGPADPKLQIVPVPEGRKVHLLP
                     ATLETTQWGWFNNAQPPVLRINSGDTVVMETMMHSHNQVIPGTTIEQIKKLRTDFPGR
                     GPHTLTGPIYIEGAEPGDVLKVTINKIVPRAYATNFNVPGMFGQFPQQFQDGQVRYMY
                     LDLDKMQTEFIPGVVVPLRPFPGTLGVARAEPGQYSSVPPGRYAGNLDIRELVAGTSL
                     YVPVFVKGALLWSGDSHAGQGNGEVNLTAMETAYKELNITVEVLKGMKLEWPRIETPT
                     HWITIGYDPKLNAGWDLLKSETSKFLVESRKVSKDEADKIMVRQWDCRISEVVNIVKG
                     TYCMSPKSPRNGPPLPAAENAQYYVTVTKDADLDKAMDGASMAMINLLQQQRNLTRLD
                     AYGLASIAMDCRLAPPAAGDEKSVHCLMPKSVFVARR"
BASE COUNT          568 a          986 c         1000 g          550 t
ORIGIN      
        1 tcggcggttg cggcgacgct gcgtcgctgg cgcggtgacg aacgcgcgta ttgctccggc
       61 gatcaggaga gtcgcggcaa atgccagcac cgtgaccgcg ccggtcggcg cgtcgatcag
      121 aaaggatccg aatatgccgg cggcgctcgc aaccgcgccg gcgatccagc cgatcaccag
      181 cgccaccccg acatgcgagg agaagaggtt gccgacaagc gccggaacga tgagaaaaca
      241 gaacaccagc aagacgccgg cggttgcgac ggaagaggtc acgactacgc cgaacgacag
      301 gtagaagacc aagtcccaac ccaggacctt gcccacgccg ttacggccat cctcgctgcc
      361 tgccgcggcc agcaacggtc ggcgtatgag ccaatgcaag gctccgatga tgccgtagag
      421 cacgacaaac ttcagcagtt cgtctcccgt caccgacagg atgcctccca ccagcatctt
      481 cttcacgtgc tcggcgcctt ggggggagcg atcgaccacc agcacggtgg cggcggtcgc
      541 gaagacatag aggacgccaa tgaacgcctc ctgtcgcacg ctgcgcgcca agccccggct
      601 cgcggtcagc agcaaggcgc cggccactgt gaaagcgagc gtataggcat agccggcggg
      661 gctctgaagc gcgtgcccgg cgaccacggc gacggtggca cccagcgccg acacctgtgc
      721 cagcgccaga tcggcaaaca cgacgttgcg ccgcagcact tggaggccga accaggtgtg
      781 aatcccggta aacacgacag ccgccgcgag cggcagcgcc gcgaatgcga gaacgtcctc
      841 cagcatgatc gctcagttcg atgcggtcga taacgcctgc gccaacgtgc cgacattata
      901 atcgaagagc gccagatagc cgttagcatc gggcacgctg ccgaccgaag gtgcgagctt
      961 gacgacctcc gcaccggtcc gccgcgccag caattgcgag gcctcctccg gttcgaacgg
     1021 ctcgtgcacg atgacgcgta tcttctgttc ccgcatcacg gccgcgagcc tggcgagccg
     1081 cgccgggctt ggggcgatcc cttccttgac ttcgatcaca tcgacgatgt tgagccggaa
     1141 gcggcgcgcg aagtacggcc acgtattgtg ataggcgatg aggcgggcgg cgcgatgggg
     1201 ggcgagaagc tgttcccatc gggcgaggct tgtcttcagg cgagagagga aattgtcgcg
     1261 gttggcgatc attttttccg ccatttccgg cgccacgcga atgcccgctt cggcgatgcc
     1321 gccgctgatc gtctccgcat tggccggatc gagccaatag tgcggattgg caaggccgtg
     1381 cgcatgccca tcgcgagcag tgggatccaa cggcgatcct ttgacctcga gcagggggat
     1441 gccgacggaa gcatcgacat aaccggcgcc gccgcggttg acgtcggcat cgccgtgcat
     1501 cgccagaagc ttatcgagcc agtgatcgta gccgaggccc acgcggatca cgatcgaggc
     1561 gcccttgagc cgcgccaaat cggaagggcg cggctcgaac gcttccgcgt ccgcccccgg
     1621 cggaatgatc gtctcgacct gcgcgagatc gcccgccacg gcctgcgcca ggctcgcgag
     1681 gtcgctggtg gtggcgacga tgcgcaaggt ccgcgccgat acgggcgccg atacgagaaa
     1741 gcttgcgatg atgctcgcca gcgcggcgcg cgctagcaac cgtgcgcgcg ccacgtgcgg
     1801 attgcgacgg ccatcacctg cgggcaacga acacgctctt tggcatcagg cagtgaacgc
     1861 tcttttcgtc accggccgcg ggcggcgcaa ggcgacagtc catggcaatg ctggctagtc
     1921 cataggcgtc gagccgggtc agatttcgct gctgctgcag gaggttgatc attgccatcg
     1981 acgcgccgtc catggccttg tcgaggtcag catccttcgt caccgtaacg tagtactggg
     2041 cattttccgc cgccggcagc ggaggtccgt tgcgcggcga tttcggactc atgcaatagg
     2101 tccccttgac gatgttgacc acttccgaga tccggcagtc ccattgccga accatgatct
     2161 tgtcggcctc gtccttgctc accttgcggc tctcgacgag aaatttcgat gtctccgatt
     2221 tcaacaaatc ccagccggcg ttgagcttcg ggtcatagcc gatcgtgatc caatgtgtgg
     2281 gggtctcgat gcggggccac tcgagcttca ttcctttcaa cacttcgacc gtgatgttga
     2341 gctccttgta tgcggtctcc atggcggtaa ggtttacttc accattgccc tggccggcat
     2401 ggctgtcgcc ggaccacagc agcgcgcctt tgacgaagac cgggacgtag agactcgttc
     2461 ccgccaccag ctcgcgaatg tcgagattac cggcataacg tccgggcgga acggacgaat
     2521 attgcccggg ctctgcgcgc gcgacgccga gagtccccgg gaacggccgc agcggcacga
     2581 ctacgcccgg gatgaactcg gtctgcattt tatcgagatc gagatacata tagcggactt
     2641 gcccgtcttg gaactgctgc ggaaactgac cgaacatgcc cggcacgttg aagttcgtcg
     2701 cataggcgcg cggcacgatc ttgttgatcg tgaccttgag cacgtcgccc ggctcggcgc
     2761 cttcgatata gatcggtccg gtcaacgtgt gcggtccgcg gccgggaaaa tcggttctga
     2821 gcttcttgat ctgctcgatc gtggtgccgg gaatgacctg attgtggctg tgcatcatcg
     2881 tttccatgac gacggtgtcg ccggaattga tgcgcaacac tggcggctgg gcgttgttga
     2941 accagcccca ctgggtggtt tccagcgtcg ccggcagaag atgtaccttc ctgccctccg
     3001 gcaccggcac gatctgcagc ttcggatcgg ccggcccgat cggtggcacc gcttgggtgg
     3061 gcggtgcggc tggcgccggc tgctgctgcg cgcggatggc ggtt
//
LOCUS       DATCWM010000179         2040 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_363319, whole genome shotgun sequence.
ACCESSION   DATCWM010000179 DATCWM010000000
VERSION     DATCWM010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2040
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_363319"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..272
                     /locus_tag="VIQ50_03420"
     CDS             <1..272
                     /locus_tag="VIQ50_03420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycine cleavage T C-terminal barrel
                     domain-containing protein"
                     /protein_id="HEY9359456.1"
                     /translation="PRRRVGLKVEGRTPVRGGANLYADEISANTIGLATSGGFSPTVQ
                     APIAMGYVDKNHVAAGQRIFAEVRGKRIALRICDLPFVAHRYKRS"
     gene            291..653
                     /gene="gcvH"
                     /locus_tag="VIQ50_03425"
     CDS             291..653
                     /gene="gcvH"
                     /locus_tag="VIQ50_03425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003529528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HEY9359457.1"
                     /translation="MLKFTEDHEWLRIEGDIATVGITDYAQEQLGDLVFVELPAPGAT
                     PEKGAAAAVVESVKAASDVYAPVSGEVTEINQAIVDEPALVNRDPMGKGWFFKIKISD
                     PSQLERLLDEKAYRAMIA"
     gene            704..>2040
                     /gene="gcvPA"
                     /locus_tag="VIQ50_03430"
     CDS             704..>2040
                     /gene="gcvPA"
                     /locus_tag="VIQ50_03430"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013216747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPA"
                     /protein_id="HEY9359458.1"
                     /translation="MFPRSCAADFDPSDFSRRHIGPSPGEMSQMLSTVGVSDIGELIA
                     QTVPDAIRQPDPLALPPGISEAEALRKLRLLAAKNKVFTSLIGQGYYGTILPPVIQRN
                     ILENPAWYTAYTPYQPEISQGRLEALLNFQTMISELCMLDIANASLLDEATAAAEAMA
                     MARRVAKSRSNAFFIDAECHPQTIAVVRTRAEPLGWSIKVGDPSTDLEPAAVFGALLQ
                     YPGSSGEIRDFRGVISALHAAGALAVMAADPLALALLTAPGELGADIAIGSTQRFGIP
                     MGYGGPHAAFIATKEAHKRALPGRIVGVSVDSRGQPAYRLALQTREQHIRREKATSNI
                     CTAQVLPAVIAAMYGVYHGPDGLRHIARQVHRTAGTLAKGLAALGWRVQQVAFFDTIT
                     IEVGAREREILNNAAESGINLRKIGMGAQARLGISCDETTTPAVVEAVWRAFGS"
BASE COUNT          403 a          629 c          633 g          375 t
ORIGIN      
        1 cgccgcgccg ccgtgtcgga ctgaaggtcg agggtcgcac gcctgtgcgg ggcggcgcca
       61 acctctacgc ggatgagatt tcggcgaaca ccatcggcct ggccacgtcc ggcggctttt
      121 cgccgactgt gcaggcgccg atcgcgatgg gctacgtcga caaaaatcat gtagcggccg
      181 gtcagcggat tttcgccgaa gtgcgcggca agcgcattgc gttgcgaatt tgtgacctgc
      241 ctttcgttgc gcatcgctac aaacgcagct gaaccgcgga ggccaatccg atgttgaaat
      301 tcacggaaga ccacgaatgg cttcgtatcg aaggtgatat cgccacagtt gggatcaccg
      361 attatgccca ggagcagctc ggcgatctcg tattcgttga attgccggca cccggagcga
      421 caccggaaaa aggagcagca gcagcagtgg tcgagtccgt gaaggccgcc tcggacgttt
      481 atgccccggt gagcggcgaa gtcaccgaga tcaatcaagc tattgtcgat gaaccggcgc
      541 tcgtgaaccg cgatccgatg ggcaagggct ggttctttaa aatcaagatt tccgatccgt
      601 cccaacttga gcggctgctc gacgagaagg cgtaccgggc gatgattgcg tgaaggatac
      661 cgccgcggtc aagccgaagc tgcgatccga agaggtgaaa gcgatgtttc ccaggagctg
      721 cgccgccgac ttcgatccga gcgatttttc ccgccgtcat atcggaccgt cgcccggaga
      781 gatgagccaa atgctctcaa ccgtcggagt atccgacatc ggtgagctca tcgcacagac
      841 ggtgcccgat gcgattcgac aaccagaccc gctcgcgctc ccgcccggga tttcagaagc
      901 cgaagcgttg cggaagctgc gcctcctggc cgccaagaat aaggttttca cgtcactgat
      961 tggtcaaggc tactatggaa cgatcctgcc gccggtgatt cagcgcaaca tccttgaaaa
     1021 ccccgcctgg tacacagcct acacgcccta ccagccggag atcagccaag ggcggctgga
     1081 agctctgttg aacttccaga ccatgatctc cgagctctgc atgctcgaca tagcaaatgc
     1141 atcgttgctc gacgaggcga ccgcggcggc ggaagccatg gcgatggcac ggcgcgtggc
     1201 gaaatcgcgc tccaacgcgt tcttcatcga cgccgaatgt catccacaga cgatcgccgt
     1261 ggtgcgcaca cgcgccgagc cgctgggttg gagcattaag gtcggcgatc cctcgacaga
     1321 tctcgagccg gctgcagttt tcggcgcgct gctgcaatat cccgggagct ccggggagat
     1381 ccgggatttc cgcggcgtca tttcggcgtt gcacgcggct ggcgcgttgg ctgttatggc
     1441 tgccgatccg cttgcgctcg ctctgctcac tgcgcccggc gaattgggag cggacatcgc
     1501 gatcggatcg actcagcgct ttggcatccc gatgggctat ggcggtccgc acgcggcctt
     1561 tatcgcaacg aaggaggccc ataaacgcgc ccttcccggc cgcatcgtcg gggtgtcggt
     1621 cgattcccgc ggtcaaccgg cctaccggct cgctctgcaa acgcgcgaac agcacatccg
     1681 tcgcgagaag gcgacctcca acatctgcac cgcgcaagtt ctcccagcag tgatcgcggc
     1741 gatgtacggc gtctatcacg gccccgacgg tctcaggcat atcgcgcgcc aggtgcatcg
     1801 caccgctgga acattggcca aggggcttgc ggcgcttggc tggcgcgtac agcaagtcgc
     1861 gttcttcgac accatcacga ttgaagtggg cgcgcgtgaa cgcgaaatcc tcaacaacgc
     1921 cgccgagagt ggaatcaatc tgcgcaagat cggcatgggc gcgcaggctc gcctcggcat
     1981 cagttgtgat gagacgacca cgccggcagt cgtcgaggca gtatggcggg cgttcggatc
//
LOCUS       DATCWM010000180         2380 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_104180, whole genome shotgun sequence.
ACCESSION   DATCWM010000180 DATCWM010000000
VERSION     DATCWM010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2380)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2380)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2380
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104180"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(13..2163)
                     /locus_tag="VIQ50_03435"
     CDS             complement(13..2163)
                     /locus_tag="VIQ50_03435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEY9359459.1"
                     /translation="MSLRQVLLSTAAAIGIATMAVAVPAPAGAQQAAVQIDNDDIGGV
                     VTGASGPEAGVWVISETTELPTKYAKIVVTDDQGRYVIPDLPNANYQVWVRGYGLVDS
                     PKLRAKPGQLINLTTVPAPNERAAAQYYPAIYWYAMMKIPPEKDFGGSTEIPKNITRE
                     TWRQRMGNVDCIGCHQLGQESTRTIPAQFGEFKTGAEAWMRRVASGQTGEFMVNRLAG
                     QLGGVPFKYFGDWSDRVAKGELPKSKPPRPQAVERNVVVTSWEWGTEKQFTHDLISSD
                     RRYPTVNAYGPLYGSPEYSSDEMPILDPKTHKVAFFKMPVADPNAPESFGPPFHASAV
                     AKPTQPSAYWGDEKIWSQRANNHNGMFDKSGRVWFAAAVRGFDNPASCKKGSDHPSAK
                     VFPLEQSGRQVAMLDPKTMKYSFIDTCFGTHHAQFSYDADNTLWLSGTGPVAGWVNTK
                     VWDETGDAAKAQGWAPFVLDTNGNGQVDEWTEPGQPAEASKDMRIAGSGPYAVMPHPT
                     DGSVWYTLNIFAGTPGFLRFDPKTKLSEFYAIPKEGIGVRGGDIDKNGVVWGSGSNGT
                     LISFDRSKCKAPLNGPTATGNHCPEGFASYKYPGPAFEGFENGSAEASYYTWVDQHNT
                     VGLGENVPISTANLNDGFVALKDGQMIMLRIPYPLSFFAKGLDGRIDDPNAGWKGRGL
                     WSTNGDRTPWLMEGGKGSRPRAVHIQIRPDPLAN"
BASE COUNT          387 a          760 c          751 g          482 t
ORIGIN      
        1 gttcaacgaa cgtcagttcg ccagtggatc agggcggatc tggatgtgca ctgcgcgcgg
       61 gcgtgagccc ttgccacctt ccatcagcca gggcgtgcgg tcgccgttgg tgctccacag
      121 cccgcggccc ttccagccgg cgttcgggtc atcgatgcgc ccgtccaagc ccttggcaaa
      181 aaagctcagc gggtacggga tgcgcagcat gatcatctgc ccatccttga gcgcgacgaa
      241 gccgtcattg aggttggcgg tcgagatcgg gacgttctcg ccaaggccca ccgtgttgtg
      301 ttggtccacc caagtgtagt agctcgcctc ggcgctcccg ttctcgaacc cctcgaaggc
      361 cggtcctggg tacttgtagg aggcaaagcc ctcgggacag tgattgccgg tcgcggtagg
      421 cccgttgagc ggagccttgc acttgctccg gtcgaagctg atgagcgtac cgtttgagcc
      481 cgacccccaa accacgccgt tcttgtcgat gtcgccgccg cgcacgccaa tgccttcctt
      541 gggaatggcg tagaactcgc tgagcttggt cttcggatcg aagcgcagga accccggcgt
      601 accggcgaag atgttgaggg tgtaccagac tgagccgtcg gtcggatgcg gcatcacggc
      661 gtagggaccc gagcccgcga tccgcatgtc cttgctcgct tctgccggct gtcctggctc
      721 ggtccattcg tcgacctggc cattgccgtt ggtgtcgagc acgaacggcg cccagccctg
      781 cgccttggcg gcatcgccgg tctcgtccca cactttggtg ttgacccagc cggcaaccgg
      841 gccggtgccg gaaagccaca gcgtgttgtc ggcgtcgtag ctgaactgcg catgatgcgt
      901 cccgaagcaa gtatcgatga agctgtactt catcgtcttg ggatcgagca tcgccacctg
      961 gcgcccggac tgctcgagcg ggaacacctt ggccgaggga tggtccgaac ctttcttgca
     1021 ggatgctgga ttatcgaacc cgcgcacggc cgcggcaaac cagacccggc cgctcttgtc
     1081 gaacatgccg ttatggttgt tggcgcgctg actccagatt ttctcgtcgc cccaataggc
     1141 cgagggctgc gtcggcttcg cgacggccga ggcatggaag gggggtccga acgattcggg
     1201 tgcgttcgga tccgcgaccg gcatcttgaa gaacgccacc ttgtgcgtct tcggatcaag
     1261 gatcggcatc tcgtcgctcg agtactcggg cgagccgtag agcggaccat aggcattgac
     1321 ggtcggatag cgccggtccg aggagatcag gtcgtgagta aactgcttct cggtgcccca
     1381 ctcccacgac gtgacgacga cgttgcgctc gacggcctgc ggccgcggcg gcttgctctt
     1441 cggcagttcg ccctttgcga cgcggtcgct ccaatcgccg aaatacttaa acggcacgcc
     1501 gccgagctgt ccggcaagcc ggttcaccat gaactcgccg gtctgtcctg acgcaacgcg
     1561 gcgcatccac gcttccgcgc cggtcttgaa ctcgccgaac tgcgccggga tggtgcgcgt
     1621 cgattcctgc ccgagctgat ggcagccgat gcagtcgacg ttacccatgc gctggcgcca
     1681 ggtctcgcgt gtaatgtttt tcgggatctc ggtcgagccg ccgaaatctt tctccggcgg
     1741 aattttcatc atcgcgtacc aataaatcgc cggataatac tgcgccgctg cccgctcgtt
     1801 gggcgccggc accgtcgtga gattgatcag ctggccgggt ttggcgcgca acttcggtga
     1861 gtccaccagc ccatagccgc gcacccagac ttggtagttc gcattcggca ggtccgggat
     1921 gacgtagcgg ccctgatcgt cggtgacgac gatcttggca tacttggtcg gcagctcggt
     1981 cgtctccgag atcacccaga cgccggcctc cggcccgctt gcgccggtga ccacgccgcc
     2041 gatgtcatcg ttgtcgatct ggactgccgc ttgctgtgca ccggccggag ccggcacggc
     2101 aaccgccatc gtggcgatgc cgattgcggc ggcagttgaa agcagaactt gccgcagact
     2161 catcttgtcc tccctgcaat gcctgggctt aagctgcccg gttgtccagt gcgatgaact
     2221 tccggcggct catagttgcc ccggggctta aaacacgcac ccatcgtctc acagccgccc
     2281 gggtcttgga acgggtgaga gggatgcgaa ctgcgaccaa ttgttctggg ctatgaatgt
     2341 ccgctaatgg gatggtccgg ccgtgctccg gcgctcattg
//
LOCUS       DATCWM010000181         2158 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_525294, whole genome shotgun sequence.
ACCESSION   DATCWM010000181 DATCWM010000000
VERSION     DATCWM010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2158
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_525294"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..238
                     /locus_tag="VIQ50_03440"
     CDS             <1..238
                     /locus_tag="VIQ50_03440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HEY9359460.1"
                     /translation="AAALAATHRIEMSSHLYSEVSVHLLAATPTCHFLEYMDWADKIL
                     TEPLEIVDGFAVVPQRPGNGLAWDKRAVETYRIG"
     gene            complement(249..794)
                     /locus_tag="VIQ50_03445"
     CDS             complement(249..794)
                     /locus_tag="VIQ50_03445"
                     /EC_number="1.13.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000334 - 3-hydroxyanthranilate
                     3,4-dioxygenase activity [Evidence IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyanthranilate 3,4-dioxygenase"
                     /protein_id="HEY9359461.1"
                     /translation="MARGRLQAFNFQNWIEAHRHLLKPPVGNKKVFEEGEMTVQVVGG
                     PNERTDYHDDPVEEFFYQLKGDMLLKVVDNGDFYDIPIREGEVFLLPPHVRHSPQRPQ
                     EGSVGLVAEAARPDELDAFEWYCFQCRALVHRIEVKVQHLVRDLPPLYEAFYADEKAR
                     RCKKCGAIHPGKKPPTGWVKL"
     gene            1058..>2158
                     /locus_tag="VIQ50_03450"
     CDS             1058..>2158
                     /locus_tag="VIQ50_03450"
                     /inference="COORDINATES: protein motif:HMM:NF012431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEY9359462.1"
                     /translation="MSGKRAFLDLLKQEGVEIMFGNPGTTELPLMDAFATENELRYLL
                     ALQEAAVMAMADGYAQASGKLAVVNLHVAPGLGNAMGMLYDAQKAGSPILVTAGQHEQ
                     SFTATEPILWADLPTIARPLVKWSSEVHRLADLPRLVHRAAKTALAPPTGPVFLSLPG
                     DILRADGDIDLSAPSRVAPRLRGDRAAVEAAAALLAEAKHPVIMAGDAVAQSRAHAEL
                     VELAELLGAPVYTEFVPSTASFPASHPLFRGAMVRLAPDVRKVLEQYDVLFSVGGDLF
                     TLSLPSDIDPMAPVIKLIHLDVDPWELGKNYPPAVSILGDPKGTLPDIIAAVRERMTS
                     STRGAARERFTAAPKAIAVEREGLAAKARAMAR"
BASE COUNT          340 a          731 c          677 g          410 t
ORIGIN      
        1 ggccgccgcg cttgcagcca cgcaccgcat cgagatgtcc tcgcacctct attccgaggt
       61 gagcgtgcat ctgctcgccg cgacgcccac ctgccacttc ctcgaataca tggattgggc
      121 cgacaagatc ttgaccgaac cgctcgagat tgtggatggg ttcgcggtcg tgccccagcg
      181 gcccggaaac gggctcgcgt gggataagcg tgcggtggag acctatcgga tcggctgaac
      241 cgaccccgtc aaagcttcac ccagcccgtt ggcggcttct tgcccgggtg aatagcgccg
      301 cacttcttgc acctgcgcgc tttttcgtcg gcgtaaaacg cttcgtaaag cggcggcaga
      361 tcccttacca gatgctgcac cttcacctcg atgcggtgca cgagcgctcg gcattggaag
      421 caataccatt cgaaagcgtc gagctcgtcc ggccgcgccg cctcggccac cagcccgacc
      481 gagccttcct gcggccgttg cggcgagtgc cggacgtgcg gcggcaggag gaagacctct
      541 ccctcgcgaa tgggaatgtc gtagaagtcg ccgttgtcga cgaccttgag cagcatgtcg
      601 cccttgagct gatagaagaa ttcctccacc ggatcgtcgt gatagtccgt gcgttcgttc
      661 ggcccgccga cgacctgcac cgtcatttcg ccctcctcga acaccttctt gttgccgacg
      721 ggaggtttga gcaggtgccg atgcgcctcg atccagttct ggaaattaaa ggcctgcagt
      781 cgtcctctcg ccatggccgt ctcctcgttc gccgcagccg caagcaagcc cagtacctcg
      841 cggccgtgtt ggccggctga tcgcgtgcgg attttcgcga tgctcgcagc gaccctcgcc
      901 cgcagccctt cgccagtcta tcatggccgc ggctgaccgc agagactgct gcgatgttcg
      961 ttgttgctgc ggctcagtcg tggccgccga ggttccgaag ccgtcgcgtc gcgatgcgct
     1021 gctcattccc taatatcggg agatcgtctt gcccgtcatg tccggaaagc gtgccttcct
     1081 cgatctgctc aagcaggagg gtgtcgaaat catgttcggc aaccccggca ccaccgaatt
     1141 gccgctgatg gatgcgttcg cgaccgagaa tgagctgcgg tatttgctcg ctctgcagga
     1201 agccgcagtc atggcgatgg cggacggcta tgcgcaagcc tcgggcaagc tcgcggtggt
     1261 caatctgcat gtcgcgcccg gtctcggcaa cgccatgggg atgctctacg acgcgcagaa
     1321 ggcgggctcg cccattctcg tcaccgccgg ccagcacgag cagagtttca ccgccaccga
     1381 gccgattctt tgggcggatc ttccgaccat cgcgcgccca ttggtcaaat ggtcttccga
     1441 ggtgcatcgc ttggccgatt tgccccggct cgtacatcgc gcggcgaaaa ccgcgctggc
     1501 gccgcccact ggaccggtct tcctgtcgct tcccggagat atcctgcgcg ccgacgggga
     1561 catcgatctc tccgcgccca gccgcgtggc gccgcggctg cggggggatc gggcagcggt
     1621 cgaagcggcg gccgccctgc tcgcagaagc aaagcatccc gtgatcatgg cgggcgatgc
     1681 cgtggcgcag agccgcgcgc atgcggaact ggtcgagctc gcggagcttt taggtgcgcc
     1741 cgtctatacg gagttcgtgc cgagcaccgc ctcgtttccc gcctcgcatc cgctgttccg
     1801 cggcgcgatg gtccgcctcg cgcccgatgt gcgcaaggtg ctcgagcagt acgacgtgct
     1861 gttctcggtc ggtggcgatc tcttcacctt gtcgcttcct tccgacatcg atccgatggc
     1921 gcccgtgatc aagctgatcc acctcgacgt ggatccctgg gagctgggca agaattatcc
     1981 gccggcggtc tccatcctcg gcgatccaaa gggcacgctg ccggacatca tcgccgccgt
     2041 ccgcgagcgc atgacgagca gcacgcgcgg cgccgcgcgc gagcgcttca cggcagcacc
     2101 caaggcgatc gccgtcgagc gcgaggggct cgcggcgaag gcccgcgcga tggcgcga
//
LOCUS       DATCWM010000182         2231 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_239074, whole genome shotgun sequence.
ACCESSION   DATCWM010000182 DATCWM010000000
VERSION     DATCWM010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2231
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_239074"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            123..1037
                     /locus_tag="VIQ50_03455"
     CDS             123..1037
                     /locus_tag="VIQ50_03455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359463.1"
                     /translation="MAEDRIRLAVQRTGTLAWELDVIRTHGLDRKFDLAIETVELAST
                     EAGKIALKGGSADLMLSDWLWVARERSLGDNLVFYPSSSTLGAVMVPAQSPIRAIIDL
                     RGKKLAVAGGPLDKSWLLLQALARRAGLDLKKQATVVYGAPPLLSEKALQGEIDATLT
                     FWNFCADLESRGHRRAIAMDDVMKGLGTTGPVALVGYTFDGTWAARNGATVERFLAAA
                     RAAKDILASSEAEWQRLVPRIRVTDASALAIYRQRYGEGIVRRPLAEEEADARALYLV
                     LSEIGGAELVGPARELPPGTFYRPAVAE"
     gene            1034..1780
                     /locus_tag="VIQ50_03460"
     CDS             1034..1780
                     /locus_tag="VIQ50_03460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9359464.1"
                     /translation="MSVGTRLVSLALLIAAWYAGSRLAGARLLPDPQAVALAIVDEAR
                     SGALAFNLGATLARVAVAFIIAMTLGSVIGLIMGRSRIADRLGDPWLIVLLNLPALVI
                     IVLAYVWAGLTETAAIAAVALNKLPIATVTVREGARSLDHALDDMAQVFRMGAWTRLR
                     HVILPQLAPYLAAAARSGLSLVWKIVLIVELLGRPNGVGFEIGVAFQLFDVTRILAYA
                     LAFIAVMLAIETFLVQPLERHVARWRPRPA"
     gene            1749..>2231
                     /locus_tag="VIQ50_03465"
     CDS             1749..>2231
                     /locus_tag="VIQ50_03465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY9359465.1"
                     /translation="MSPAGARGRLDVNIRQKSFRAASGGKLHVLGELKFSLRGGEVAA
                     LVGPSGCGKTTLLRIVAGLDRDFDGNVAFPAHGTLAMMFQEPRLLPWRTVEQNVRLAA
                     PRATGASLEMLFQTLGLKAHRDHYPRELSLGLARRVALARAFAVEPDLLLLDEPFVSL
                     D"
BASE COUNT          324 a          736 c          732 g          439 t
ORIGIN      
        1 ccgccgttgc ccaaccggcc ggcatttgca tcggccgtga gctatggcat cgtctgcaca
       61 tgtttcgcat gttgggtttt tcacttgccg gcatcatcac gcttgccgct caaacgagcg
      121 caatggccga ggatcgcatc cggctggcgg tgcagaggac gggcacgcta gcgtgggagc
      181 tcgacgtcat caggacgcac ggcctcgatc gcaagtttga tcttgcgatc gaaaccgtcg
      241 aactcgcctc gaccgaagcc ggcaagatcg cactcaaggg cggctcagcg gatcttatgc
      301 tgtcagattg gctatgggtc gcgcgcgagc gttcgctcgg cgataatctc gtcttttatc
      361 cctcgtcgag cacgctcggc gcggtgatgg tgcctgcgca atcgccgatc cgggcgatca
      421 tcgatctccg cggcaagaag cttgccgttg ccggcggccc actcgacaaa agctggctgc
      481 tgctgcaggc gctggcgcgc cgcgccggtt tggatctcaa gaagcaggcg accgttgtct
      541 acggcgcgcc gccactactg tcggagaagg cgctgcaagg cgagatcgac gctacgctga
      601 cgttctggaa tttctgtgcc gacctcgaaa gcaggggcca ccggcgtgcc attgcgatgg
      661 atgacgtcat gaaaggcctt ggaacgacgg ggccggtcgc gctcgtcggc tacacgttcg
      721 acggcacgtg ggctgcgcgc aacggagcca ccgtcgagcg cttcctcgcc gccgcccgtg
      781 cggccaagga catccttgct tcgtcggagg ccgaatggca gcggctggtg ccgcgcattc
      841 gcgtcaccga tgcgagtgcg cttgcgatct accgccagcg ttacggcgaa ggcatcgtgc
      901 gccggccgct cgccgaggag gaggcggacg cccgggcgct ctatctggtg ctctccgaga
      961 tcggtggggc ggagctcgtc ggcccggcgc gcgagcttcc ccctggaacc ttctatcgcc
     1021 cggccgttgc ggagtgagcg tgggcacgag gctcgtctcg ctcgccctgc tgatcgcggc
     1081 ctggtacgcc ggctcgcgac tcgccggtgc acgcctgctt cctgatcccc aagccgtggc
     1141 gctggccatt gtcgatgaag cgcgttcggg cgcgctcgct ttcaatctcg gcgcgacgct
     1201 cgcgcgcgtc gcggtggctt tcatcatcgc tatgacgctc ggctcggtga ttggcctcat
     1261 catgggtcgg tcgcggatcg ccgaccgact cggcgatccc tggttgatcg tcctgctcaa
     1321 cctgccggcc ctggtgatca tcgtgctcgc ctatgtctgg gcggggctga cggaaaccgc
     1381 ggcgatcgcg gcagtggcgc tgaataagct tccgatcgcg accgtaactg tgcgcgaggg
     1441 cgctcgttcg ctcgaccacg ccctcgacga catggcgcag gtatttcgca tgggagcatg
     1501 gacgcgcttg cgccacgtca tattgccgca gctcgcaccc tatctcgctg ccgccgcccg
     1561 ctccggcttg tcgctggttt ggaaaatcgt gctcattgtc gaactgctcg ggcgaccgaa
     1621 cggtgtcggc ttcgagatcg gggtcgcgtt ccagctgttc gacgttacgc gcatcctggc
     1681 ctatgctctc gccttcatcg ccgtcatgct ggcaatcgaa acgtttctgg tgcagccgct
     1741 tgaacgacat gtcgcccgct ggcgcccgag gccggcttga cgtcaatatc aggcaaaagt
     1801 cttttcgtgc cgcctccggc gggaagctcc acgtgctcgg cgagcttaag ttcagccttc
     1861 gcggcggaga ggtcgccgcg ctggtcgggc cctccggatg cggaaagacc acgctgctgc
     1921 ggatcgtcgc ggggctcgac cgtgatttcg atggcaacgt tgcgttcccc gcccacggca
     1981 cgcttgccat gatgttccag gagccacgcc tgttgccgtg gcgcacggtc gagcagaacg
     2041 tgcggctcgc cgcgccgcgg gcgacgggtg ccagcctcga gatgctgttc cagacgctcg
     2101 gcctcaaggc tcatcgcgac cactatcccc gcgaactttc gcttgggctc gcgaggcggg
     2161 tggcgctggc gcgggccttc gcggtcgagc ccgatctgct tctcctcgac gagccattcg
     2221 tgtcactcga c
//
LOCUS       DATCWM010000183         4745 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_6889, whole genome shotgun sequence.
ACCESSION   DATCWM010000183 DATCWM010000000
VERSION     DATCWM010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4745
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6889"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..263)
                     /locus_tag="VIQ50_03470"
     CDS             complement(<1..263)
                     /locus_tag="VIQ50_03470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359466.1"
                     /translation="MRRRALSLIRVRALPGNRTRGTLLAGTRALPVVLGRGGIRANKF
                     EGDGATPRGKFRLIRLWWRADRHPHPPTLLPAWRIGPPLAWCE"
     gene            397..1083
                     /locus_tag="VIQ50_03475"
     CDS             397..1083
                     /locus_tag="VIQ50_03475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007872155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY9359467.1"
                     /translation="MTNTRKILIVDDDSELREALVEQLALHEEFESIAVDNGTKGVQA
                     AKAGQIDLVIMDVGLPDVDGREAVRILRKNGFKAPIIMLTGHNTDSDTILGLESGAND
                     YVTKPFRFAVLLARIRAQLRQHEASEDAVFTIGPHTFRPSSKILLNPKGNKVRLTEKE
                     TAILRYLYRAGQRPVSRETLLQEVWGYNSGVTTHTLETHIYRLRQKVEKDAASPAILV
                     TEAGGYKLVP"
     gene            1093..1551
                     /locus_tag="VIQ50_03480"
     CDS             1093..1551
                     /locus_tag="VIQ50_03480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEY9359468.1"
                     /translation="MAIDDDIAFLQRVPTIGPLGRAALRILAIGAETRHLNEGDVLFS
                     AGEAAEGGYVVQAGRFSLQGAEDGNELTVGPGTLLGEVALFAETKRTATATALEPAAV
                     LYISRPLFVRMLDSFPDAAHKLRETFAGRLDLATREITNVGTFLDAHEPK"
     gene            complement(1740..2555)
                     /locus_tag="VIQ50_03485"
     CDS             complement(1740..2555)
                     /locus_tag="VIQ50_03485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018459654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEY9359469.1"
                     /translation="MRLTITTWNINSVRLRIEAVARFVKAVRPDVLCLQETKCPDDRF
                     PLKRFKRLGYEHVALNGQKGYHGVVVLSRLPFESFAIQSFCGKVDCRHISAVLGERAG
                     LRDPIVLHNFYVPAGGHLPDPALNPKFAHKLAFLDEMRACDALRCQNSNRMILLGDLN
                     VAPLEHDVWSHKQMLRVVSHTPIECEKLVAAQRDGGWVDAMRMLVPEPTKLYTWWSYR
                     SLDWQTADKGRRLDHIWVAPALADRLAGIEVMKHLRGSSRPSDHVPVTATLEL"
     gene            complement(2733..3500)
                     /locus_tag="VIQ50_03490"
     CDS             complement(2733..3500)
                     /locus_tag="VIQ50_03490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016841443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein carrier protein LolA"
                     /protein_id="HEY9359470.1"
                     /translation="MVALGWAANAEPIPLPTPAPLPKERGTAANKPAAPAQSAAPAQS
                     AASGLAAGVRSLFHLDKDPEPTTPAATTSTGFTPAQRAQVDKVSAYLTNMQQLIGDFV
                     QVGPDGSRVKGEFYIQKPGRVRFEYEPPSRIEIVADGQSVIVRDRKLATQDLYPLSQT
                     PLRYLLSERIDLMRETNVIGVRADDTFVTITIEETQPLVGTSRLVMMVGAKDYQLKQW
                     TITDPQGYDTTVAVSNLDNSKRPDPGMFKIDYTRYIQ"
     gene            complement(3670..>4745)
                     /locus_tag="VIQ50_03495"
     CDS             complement(3670..>4745)
                     /locus_tag="VIQ50_03495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015616 - DNA translocase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HEY9359471.1"
                     /translation="HLLIAGTTGSGKSVAINTMILSLLYRLRPEQCRLIMVDPKMLEL
                     SVYDGIPHLLTPVVTDPKKAVVALKWAVREMEERYKKMSKLGVRNIDGYNARVSEAKS
                     KGEKLTRTVHTGYDKESGEAIYETEDLELEPLPFVVVIVDEMADLMMVAGKDIEGAVQ
                     RLAQMARAAGLHVILATQRPSVDVITGTIKANFPTRISFQVTSKIDSRTILGEQGAEQ
                     LLGQGDMLYMAGGGRISRVHGPFCSDEEVEKVVRHLKSQGTPQYLDAVTAADEEDEDG
                     NPVFDATGMGEADGGDLYQQAVQVVLRDRKASTSYIQRRLQIGYNRAASLMERMEKEG
                     VVGQANHAGKREILVGEEETARY"
BASE COUNT          824 a         1510 c         1545 g          866 t
ORIGIN      
        1 tcttcgcacc aggcgagggg ggggccaatg cgccaggcag gcagcaatgt gggcgggtgt
       61 ggatggcgat cggcccgcca ccacaggcgg ataagccgga atttgccgcg cggagttgcg
      121 ccgtcgccct cgaatttgtt ggcgcggatg cccccccggc cgagcaccac cggcagcgcg
      181 cgggtccccg cgaggagggt gccgcgggtg cggttgcccg ggagggcccg tacgcggatt
      241 agggaaagcg cccggcgtcg catgggttaa tcttcctagc acggaaggag catgaccccg
      301 gcaatcctgg cttgcccttt tcccctcgaa tgctctattt cgcgccatgc cgtgccggga
      361 cgatgctgcg aggtttgccg ctcctggggc ccagatatga cgaacacccg taaaatcctg
      421 atcgtggacg acgattccga gttgcgcgag gcgctggtcg agcaactcgc gctgcacgag
      481 gagttcgaat cgatcgcggt cgataacgga acgaaagggg tgcaagccgc caaggccggg
      541 cagatcgatc tggtgatcat ggatgtcggt ttgcccgacg tcgacggacg cgaagccgtg
      601 cgcattctgc gcaagaatgg cttcaaggcg ccgatcatca tgctgaccgg gcacaacacc
      661 gattccgata ccatcctcgg cctcgaatcg ggcgccaacg actacgtgac gaaaccgttc
      721 cgcttcgcgg tgctgctggc gcgcatccgc gcccaactgc gccagcacga ggcgagcgag
      781 gacgcggtct tcaccatcgg cccgcacacg ttccggccca gctcgaagat cctgctcaat
      841 ccgaagggca acaaggtccg cctcacggag aaggagactg cgattctgcg atatctttat
      901 cgcgctggcc aacggccggt ctcgcgcgag acgctgttgc aggaagtctg gggatacaat
      961 tccggcgtca ccacccacac actcgagacg cacatctacc ggctgcggca gaaggtggag
     1021 aaagatgccg ccagtcctgc catcctggtc accgaagcgg gcggctacaa gctggtgcca
     1081 tagcgccgcc ccatggccat cgacgacgac atcgcctttc tccaacgcgt gccgacgatc
     1141 ggtccgctgg gacgggcggc gttgcgcatt ttggcgatcg gcgcggagac gcggcacctc
     1201 aatgagggcg acgtgctgtt cagcgccggc gaggcggcgg agggcggtta cgtcgtccaa
     1261 gcgggccgat tcagcctgca gggggcggag gacgggaacg agctcaccgt cggcccgggc
     1321 acgctgctgg gagaggtggc actgtttgcc gagaccaagc gaacggcgac cgccacggcg
     1381 ctggagccgg ccgccgtgct gtacatttca cgaccgcttt tcgtccgaat gttggatagc
     1441 tttccggatg cggcgcacaa gctgcgcgag actttcgccg gtcggctcga tctagcgacg
     1501 cgcgagatca ccaatgtggg cacgttcctc gatgcccacg aaccgaagta atcgtacggc
     1561 tgtccctccg ccgtcatggc cgggcgtagc gcgtcggaag acgcgcgtga acgcgcttat
     1621 gtcccggcca tccacgtctt tgtcgcagca cggaacacaa gacgtggatg cccggcaccg
     1681 cagacaagtt tacgcagtct gcgcaagctt tgactgcgtg ccgggcatga cgagattatt
     1741 tacagctcca gcgtcgccgt taccggcaca tgatccgacg gccgcgacga gccgcgcaga
     1801 tgcttcatga cctcgatgcc ggcgagccgg tcggcgagcg ccggcgcgac ccagatgtga
     1861 tcgagtctgc ggcctttgtc cgcggtttgc caatcaagcg agcggtagct ccaccatgtg
     1921 tagagcttcg tcggttccgg aaccaacatg cgcatggcat ccacccagcc gccgtcgcgc
     1981 tgcgcggcga cgagtttctc gcactcgatc ggggtgtgcg acaccacgcg gagcatctgt
     2041 ttgtggctcc agacatcgtg ctcgagcggg gcgacgttga gatcgccgag caggatcatc
     2101 cggttcgagt tctggcagcg cagcgcgtcg cacgcgcgca tttcgtcgag aaaggcaagc
     2161 ttgtgcgcga acttcggatt gagcgccgga tcggggagat ggccgccggc gggcacgtag
     2221 aagttatgca ggacgatggg atcgcgaagg ccggcccgtt cgcccagcac cgccgagatg
     2281 tgccggcagt cgaccttgcc gcaaaacgat tggatcgcga agctttcgaa cggcaggcgc
     2341 gaaagaacga ccaccccgtg ataacccttc tgcccgttga gcgccacgtg ctcgtagccc
     2401 aggcgcttga aacgcttgag cggaaagcgg tcgtcggggc acttggtttc ctgcagacag
     2461 aggacgtcgg gccgcaccgc cttgacgaat ctcgctaccg cctcgatgcg cagccgcacc
     2521 gaattgatgt tccacgtcgt gatcgtcagc cgcatcggat gtaatggggc gcatcggtcg
     2581 cgcgctctaa ttggcgatcg cttgcgatga ggtcaagcgc caacgcgagg agcacgtggg
     2641 ccgttcacgt ctctaatgga agggccgcga cataagtgcg ttcacgcgcg ccttccgacg
     2701 cgctatgcgc ggacgatgac gatgacacac cgctactgga tgtaacgggt gtaatcgatc
     2761 ttgaacatgc cgggatccgg ccgcttgctg ttgtcgagat tggagaccgc gaccgtggtg
     2821 tcgtagccct gcggatcggt gattgtccac tgcttcaatt gataatcctt ggcgcccacc
     2881 atcatcacca atcggctggt gccgacgagc ggttgcgttt cctcgatggt gatcgtcacg
     2941 aaggtgtcgt cggcgcgtac gccgatgaca ttcgtctcgc gcatgaggtc gatgcgctcg
     3001 gagaggaggt agcgcaacgg cgtctgcgac agcgggtaga gatcctgggt ggcgagtttg
     3061 cggtcgcgca cgataaccga ctgtccgtcg gcaacgatct cgatgcggct gggcggctcg
     3121 tattcgaagc gcactctgcc gggcttctga atgtagaact cgcccttgac gcgagagccg
     3181 tcggggccga cctggacgaa atcgccgatc aattgctgca tgttcgtgag gtacgcgctg
     3241 accttatcga cctgcgcgcg ctgagcgggc gtgaaaccgg tgctggtcgt cgccgccggc
     3301 gtcgtcggct ccgggtcctt atccagatga aacagagacc tcaccccggc cgccaggccg
     3361 gaggcggcgg attgtgcggg tgcagcggat tgcgcaggcg ccgcgggttt gttcgccgcc
     3421 gtgcccctct ccttgggcag tggcgcaggc gtcggcagcg gaatgggttc ggcgtttgcc
     3481 gcccatccca gcgcgaccat gcccaacacc gccaccccga cgaacagtcc ctggcccgtg
     3541 ccagccatgg tccctctccc ggtccccccg gtcgggtaac cgccccgtgt ggcgagaaga
     3601 cgaccaatcc ggcaaaaaag gccgtaaccg gcgttaggaa gaccatgcgc gacggaggga
     3661 cgcagtctct caatatcgcg cggtttcctc ctcgccgacc aggatttcgc gcttgcccgc
     3721 gtggttcgcc tggccgacca cgccttcctt ctccatgcgc tccatgagcg aggccgcccg
     3781 gttgtagccg atctgcaatc ggcgctggat atagctggtc gaggccttgc ggtcgcgcaa
     3841 gacgacctgc accgcctgct gatagagatc tccgccgtcg gcctcgccca tgccagttgc
     3901 gtcgaagacc ggattgccgt cttcgtcctc ctcgtccgcc gcggtgacgg catcgaggta
     3961 ttgcggcgtg ccttgcgatt tgaggtgccg gacgactttc tccacctctt cgtccgagca
     4021 gaacgggccg tgcacgcggc tgatccggcc gccgccggcc atatagagca tgtccccctg
     4081 cccgagcagc tgctcggcgc cctgctctcc caaaatggtg cggctgtcga tcttcgaggt
     4141 gacctggaac gagatccggg tcgggaaatt ggccttgatc gtaccggtga tgacgtcgac
     4201 cgaggggcgt tgcgtcgcca ggatcacgtg cagcccggcc gcgcgcgcca tctgcgcgag
     4261 gcgctgcacg gcgccctcga tatccttgcc ggcgaccatc atcagatccg ccatctcgtc
     4321 gacgatgacc accacgaacg gcagcggctc caactcgaga tcctcggtct cgtagatggc
     4381 ctcgccgctc tccttgtcgt agccggtatg gacggtgcga gtgagcttct cgcccttgct
     4441 cttggcctcg ctcacgcgcg cattgtagcc atcgatgttg cgcacgccga gcttcgacat
     4501 tttcttgtag cgctcctcca tctcgcgcac cgcccatttg agcgcgacga ccgccttctt
     4561 gggatcggtg accaccgggg tgagcaggtg cgggatgccg tcgtagaccg acagctcgag
     4621 cattttcgga tcgaccatga tcagtcggca ctgttcgggc ctcagccgat agagcaggct
     4681 gaggatcatg gtgttgatgg cgaccgactt gcccgatccg gtggtgccgg cgatcagcag
     4741 atgcg
//
LOCUS       DATCWM010000184         2823 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_320100, whole genome shotgun sequence.
ACCESSION   DATCWM010000184 DATCWM010000000
VERSION     DATCWM010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2823
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_320100"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..162)
                     /locus_tag="VIQ50_03500"
     CDS             complement(<1..162)
                     /locus_tag="VIQ50_03500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY9359472.1"
                     /translation="MARPYSSDLRERVVEAVNEGATRHEAAEHFGVSVSSAVRWHQAW
                     RDEGRCGAKP"
     gene            333..1193
                     /locus_tag="VIQ50_03505"
     CDS             333..1193
                     /locus_tag="VIQ50_03505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007599989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEY9359473.1"
                     /translation="MAEMSPLRRRMVEDMTVRNLSPATQRSYVHAVSKFSRYFGRSPD
                     RLGLEDVRAFQVHLVSTEISWPALNQVVCALRFFYGVTLGRGEIPERIPYAREPRKLP
                     VVLSADEVVRFLEAVPSLKTRAALTTAYAAGLRASETVGLKVGDVDSGRMVIRVEAGK
                     GGKDRYVMLSAQLLGILRSYWRLARPRHWLFPGRAETKPIDVQVLYAACRSACKAAGL
                     DKRVTVHTLRHSFATHLLESGTDIRIIQVLLGHNNLSTTARYTRVSNGLIRRTESPLD
                     RLTLEVVPPA"
     gene            1206..2384
                     /locus_tag="VIQ50_03510"
     CDS             1206..2384
                     /locus_tag="VIQ50_03510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015886711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
                     /protein_id="HEY9359474.1"
                     /translation="MSASLEVADVFRRHGDAYRRAHDGHLGRIERRVMSAIALCRTAA
                     LGGHTEACAECGLVRCAYNSCRNRHCPKCQGAARAEWLAARQAELLPVPYFHVVFTLP
                     AAVAEIAFQNKETVYAVLFRAAAETLRTIAADPKHLGAEIGLVAVLHTWGQTLHHHPH
                     VHCVVPGGGPSFDGTRWVACRPGFFLPVRVLSRLFRRLFLAELEAAFAAGQFGFFGEL
                     ADLAEPATFARQLNKLRRVEWVVHAKPPFGSPKQVLAYLGRYTHRVAISNARLVSMSD
                     GQVAFRWKDYRHHGRSKVMTLAADEFIRRFLLHTLPDGFHRIRHYGFLANGHRAAKLA
                     LCRRLLGAPATDAPADEVEDEASLRGPGRCPCCGGMMMLTGVLPRLMPQRPRFWDDSS
                     "
BASE COUNT          428 a         1006 c          891 g          498 t
ORIGIN      
        1 gggcttggcg ccgcatctcc cctcgtcgcg ccacgcctga tgccaccgca ccgccgagct
       61 gacgctgaca ccaaagtgtt ccgccgcctc gtgccgtgtc gctccttcgt taactgcctc
      121 caccacacgt tcgcgcaaat ccgacgaata aggtcttgcc atggctcccc caaaggcgaa
      181 tcacctcgca agactctgcc ctttcgtccc tcctgggaat cccgattgaa cgaacccgct
      241 gtcgcgggaa aggggtgagt ggatagggga ggtctcctgt ctgagaggat tgtgggcgtc
      301 gaagcccaac cctcaagaca ggagaacccc cgatggccga gatgagccct ctacgccgcc
      361 gcatggtcga ggacatgacg gtccgcaatc tgtcgccggc gacgcaacga tcctacgttc
      421 acgcggtctc gaagttcagc cggtattttg gccggtcgcc ggatcggctg ggcctggaag
      481 atgtccgtgc cttccaggtc catctggtgt cgaccgagat ctcctggccg gctttgaacc
      541 aggtcgtgtg cgcgctgcgc ttcttctacg gcgtgacgct cggccgcggg gagataccgg
      601 agcgcattcc ctacgcccgg gagccgcgga agctgccggt tgtgctgagc gctgacgaag
      661 tggtgcgctt tctcgaggcg gtgccgagcc tgaagacgcg ggcagcgctg acgacggcct
      721 atgcggcagg gctgcgggcc tcggagacgg tcggcctcaa ggtcggcgat gtcgacagcg
      781 gccggatggt gatccgggtg gaggcgggca agggcggcaa ggaccgctat gtcatgctgt
      841 cggcgcagct gcttgggatc ctgcggtcct actggcgcct cgcccggccg cgccactggc
      901 tgttccccgg ccgcgcggag acgaagccga tcgacgtgca ggtgctttac gcggcgtgcc
      961 gttcggcgtg caaggcggcc ggcctcgaca agcgcgtgac ggtgcatacg ctgcgccaca
     1021 gcttcgccac gcatctcctg gagagcggca ccgacattcg cattatccag gtgttgctcg
     1081 gacacaacaa cctgtcgacg accgcccgct acacgcgggt ctcgaacggg ttgatccggc
     1141 ggaccgagag cccgctcgac cggctgacgc tggaggtcgt gccgcccgcc tgagctggct
     1201 gccccgtgtc ggccagcctg gaagtggcgg acgtcttccg ccgccacggc gacgcctatc
     1261 gacgcgccca tgatggtcat ctcggccgca tcgagcggcg ggtgatgagc gccatcgcgc
     1321 tgtgccggac ggcggcgctg ggcggtcaca ccgaggcctg cgccgagtgc ggcctcgtgc
     1381 ggtgcgccta caactcctgc cgcaaccggc attgcccgaa gtgccagggc gccgcgcggg
     1441 ccgagtggct tgcggcgcga caggccgagc tgctcccggt gccgtacttc catgtcgtgt
     1501 tcaccctgcc ggctgcggtg gccgagatcg ccttccagaa caaggagacg gtctacgccg
     1561 tcctgttccg ggcggcagcg gagacgttgc ggaccatcgc cgccgacccc aagcacctag
     1621 gcgccgagat cggcctcgtt gccgtgctcc atacctgggg ccagaccctc caccatcatc
     1681 cgcatgttca ctgcgtcgtg ccgggcggtg gcccgtcgtt cgatggcacg cgctgggtcg
     1741 cctgtcgccc cggcttcttc ctgccggtgc gcgtgctctc ccgcctcttc cgtcggctgt
     1801 tcctcgccga gctcgaggcg gcgttcgcgg ccggccagtt cggcttcttc ggagaactcg
     1861 cggacctcgc cgaacccgcc acctttgccc gccagctcaa caagctgcgg cgggtcgagt
     1921 gggttgtcca cgccaagccc cccttcggca gtccgaagca ggtgctggcc tatctcggcc
     1981 gctacacgca tcgtgtcgcg atatccaacg cgcgcctcgt cagcatgtcg gacggccaag
     2041 tcgctttccg ctggaaggac taccgccacc acggccgctc gaaggtcatg accctcgcgg
     2101 cagacgagtt catccgccgg ttcctgcttc acacgttgcc ggacggcttc catcgcatcc
     2161 gccactacgg cttcctggcc aacggccatc gcgccgccaa gctcgcactc tgccgcaggc
     2221 tgctcggcgc gcctgcgacc gacgcaccgg ccgacgaggt tgaggacgaa gcctcactgc
     2281 gaggacccgg gcgctgtccc tgctgcggcg gcatgatgat gctgactggc gtcctgccgc
     2341 gcctcatgcc tcagcgaccg cggttctggg acgacagctc gtgacacgcc catgctccga
     2401 cagcattgcc gtactcacca cggacgctgg ccacgcccgc tgggatggct tcgtccgtga
     2461 gcatagccgc gatccggccc accaccgcag cgacgctgat cgcgctccac gtcacagtcc
     2521 cgcctgtttc caaccgcgcg caaccattcc cgccaatcgc tgtcggccga tcaataatct
     2581 catagccggc acacaatggg gcgtctcgga caaggcgccg gcgacacaat ctccatagac
     2641 cgcgcctgcc atcccgcggg ttcgctcaat ccggcttcaa tgaggtcgcg ctctcgctta
     2701 ccctggcctc ccgtgccgcg cgacctcaca gaagcctcca gattcaaaca accatttacc
     2761 cggattcgtt tgttgcgcgc tcggtgttcg tcgccgagtt tttcaacagc atcggtcaga
     2821 ggc
//
LOCUS       DATCWM010000185         7878 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_212123, whole genome shotgun sequence.
ACCESSION   DATCWM010000185 DATCWM010000000
VERSION     DATCWM010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7878)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7878)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7878
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_212123"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..266
                     /locus_tag="VIQ50_03515"
     CDS             <1..266
                     /locus_tag="VIQ50_03515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359475.1"
                     /translation="FRVHGDRSDVAFVCLAAISRQGRSYRSVMIRSEAAGIESGKHAV
                     LTAISRKPRSVSAAMVRPASAATADVSDGLPSLLCACIDRPAG"
     gene            217..1443
                     /gene="hemA"
                     /locus_tag="VIQ50_03520"
     CDS             217..1443
                     /gene="hemA"
                     /locus_tag="VIQ50_03520"
                     /EC_number="2.3.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003870 - 5-aminolevulinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-aminolevulinate synthase"
                     /protein_id="HEY9359476.1"
                     /translation="MDYQAYFAHALTGLRDERRYRVFADLERHAGRFPHAKWHSPDGP
                     RDVVIWCSNDYLGMGQHPKVISAMIETATRMGTGAGGTRNIAGTNHPLVELERELADL
                     HGKEAALVFTSGYVSNETGIATLAKLIPNCLILSDALNHNSMIEGVRQSRCEKQIFRH
                     NDTAHLEGLLRAAGERPKLIVFESLYSMDGDVAPTRAICELAERHGAMTYIDEVHAVG
                     MYGPRGAGIAARDGTMERIDVIEGTLAKAFGGLGGYIAGSGRLIDAVRSYAPGFIFTT
                     ALPPAVCAAATAAIRHLKASDWERERHQDRAGRTKAVLAAAGLPILQNETHIVPVFVG
                     DPELCKQASDLLLERHAIYIQPINYPTVAKGSERLRITPSPHHDDALIDELAEAMVDV
                     WEELGLPLNRRALAAE"
     gene            1614..2891
                     /locus_tag="VIQ50_03525"
     CDS             1614..2891
                     /locus_tag="VIQ50_03525"
                     /inference="COORDINATES: protein motif:HMM:NF024241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9359477.1"
                     /translation="MTVTTASFGTAGPAPSHVSLGGLDAANFFVAGILAGFGPYVAAY
                     LADQKWSQENIGFVLTASSLAGLLSQLPGGELLDTIRSKRAIVAAGATIVAVSAIIIA
                     FEPRFPLVFIALMLQGITGGLLGLAIAAISLGLVGQSGLPERLGRNQRFASTGSLVAA
                     AIMGLIGYFLSYKAIFVAVAALTPALFVALARIHAPDVHFGRACGAPHHHESGQPERT
                     KRWTLCQRSELLAFASCLFLFQLANASMLPLVVEALVYEGERRSSLVVSALIVLPQIL
                     VALLAPWVGRQAKSWGRRPLLLIGFGALPIRALLFALVLDPPLLIVFQLLDGISGAVL
                     GVLTALVIADVTGGTGRFNLAQGLAGTASGIGASLSTTLFGLLAGGFGRAAAFVSIAA
                     VGLVAVLIVWFFMPETKPSAMNGLRSWPKSSAS"
     gene            2980..5157
                     /locus_tag="VIQ50_03530"
     CDS             2980..5157
                     /locus_tag="VIQ50_03530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011504942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching N-terminal
                     domain-containing protein"
                     /protein_id="HEY9359478.1"
                     /translation="MSFKVHVGPPQIAIHEGQTVLVSEPDGRITWPSEKGLYFLDTRI
                     VSAWTIYANGELWELLNGGPINYHSARIFLTNKTIFTEDGTIAPRTLGLTISRSIIGG
                     MHEDLDITNNSMNAVRFQLEVAIRCDFADIFEVKSGRIVRRGQITTEWSQRRQRLHTV
                     YSNRDFHRSVTITVPRATSKAVSANGRLSFEVALGAGEAWHACLLYTLEDGEQRFHAP
                     SDCVGEVHKSPYSLTMTEWLKTVVKIETSNEEFYRLFRQALEDMAALRLPIRGTDHTV
                     FLPAAGLPWFVAPFGRDSLIVSLQNILVYPEFAHGALEILGSLQAKDDDPYRDAEPGK
                     ILHELRYGELAHFKLIPHTPYYGTADATPLYLITLHAAWRATGDKALLERHLPTAEGC
                     LAWIDEYGDRDRDGFQEYQTRSPAGYENMAWKDSGDAVMYPDGSLVKGPKALCELQGY
                     VYNAWIRMAEAFDALGKPERAKALRAKAAVLFERFNEAFWDEELGFYAYALDGDKNKV
                     LTVASNPGHCLWSGIVPSERAKRVVDRLMAPDMWTGWGIRTLSSDHRAFNPYNYQTGS
                     VWPHDNAIIAMGFKRYGFAAEAARVAHDVSVAASHFLLNQLPELYTAAERNETNFPVQ
                     YIGANVPQAWAAGSVFMLTQALLGFQPDAPRNKLYVDPSLPYWLPDLRVRDLRIGKHK
                     LDIRFWTEGDETEFEVIKGDPKVVERCELGSALAHLRVASDLN"
     gene            5215..6864
                     /gene="zwf"
                     /locus_tag="VIQ50_03535"
     CDS             5215..6864
                     /gene="zwf"
                     /locus_tag="VIQ50_03535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004345 - glucose-6-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HEY9359479.1"
                     /translation="MDREDSAPSLRSSRPGTSPGGGSRSTTTLDADPAAIAKCFPNRR
                     APPAVIAIFGAGGDLTKRLVVPALYNLVRGGMLPDSFAIIGIDHNEMTTQEWCQSLTE
                     MMQGFVRADGRSGAIDEQAWSWLTRRMHYMQGDFTQAETYRRLDKLLSEQFARQGGTA
                     NALFYMAVADRFFGPVIEQLGGAGLMRQSENAWRRVIVEKPFGHDFASAAALNAQILK
                     VLTEDQIYRIDHFLGKETVQNILVLRFANGIFEPLWNRDHVDHVQITAAETVGVEQRG
                     RFYETTGALRDMVPNHLFQLLAMIAMEPPISFDADAVRAKKTELFQAVHPISPENAVR
                     GQYGAGELLGKKVGDYRHEPNVAPNSATETYVALKLGIDNWRWAGVPFYLRTGKRLSA
                     RTTEIAVHFRQAPYALFRDTPVDRLPANILMLRIQPDEGLSLTFSAKRPGADIEIAGV
                     EMDFAYRDYFAPLASVGYETLIYDCLIGDATLFQRADTVEAAWSAVQGLLDAWARTPA
                     DDFPNYAAGSAGPAAADRLLARDGHAWLPIRAEHHHPGHST"
     gene            6956..>7878
                     /gene="tal"
                     /locus_tag="VIQ50_03540"
     CDS             6956..>7878
                     /gene="tal"
                     /locus_tag="VIQ50_03540"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011930959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HEY9359480.1"
                     /translation="MKATRMLHELGQSLWLDNITRNLLNTGVLRRYIDELSVTGLTSN
                     PTIFDHAIKNSRDYDDAIKRKLAEGKSGEKLFFELALEDLRQAADLFRPIYDRTCGVD
                     GWVSLEVSPLLAHDTKSTIGAAKELHAQAQRPNLFIKIPGTREGLPAIEEAIFAGVPV
                     NVTLLFSGGQYLEAANAFMRGIERRIEAGLRPDVASVASIFISRWDVAVTGKVPKALN
                     DRLGIAVAKRAYKAYLGLLSSPRWMRAYNAGARPQRLLWASTGTKDPEASDVLYIKGL
                     AAPFTVNTMPEGTLKALADHGDVGATLPADGG"
BASE COUNT         1457 a         2496 c         2447 g         1478 t
ORIGIN      
        1 cttttcgcgt tcacggcgac cgatcagacg tcgcattcgt ctgcctggcc gccatctccc
       61 ggcagggccg gtcgtatcgc agcgtcatga ttcggagcga agcagccggc atcgaatccg
      121 gcaagcatgc cgtattaacg gcaatatcgc gcaagccgcg ctccgtttcc gccgccatgg
      181 tgcgtccagc atcggccgcc accgcggatg tgagcgatgg attaccaagc ctactttgcg
      241 catgcattga ccggcctgcg ggatgaacgc cgctatcggg tgtttgccga tctcgagcgc
      301 cacgccggcc gctttccgca cgccaaatgg cattcccccg acggtccgcg tgatgtcgtg
      361 atctggtgct cgaacgatta tctcggcatg ggacagcatc ccaaggtgat cagcgccatg
      421 atcgagacgg cgacccggat gggcaccggt gccggcggca ctcgaaacat cgccggcacc
      481 aatcacccgc tggtcgagct cgagcgcgag ctcgccgatc tacatggcaa ggaagccgcg
      541 ctcgtcttca cctcgggtta cgtttccaac gagaccggca tcgccacgct cgccaagctc
      601 atcccaaact gcctgatcct atcggacgcg ctcaaccaca attcgatgat cgagggcgtg
      661 cgccagtccc gttgcgagaa gcaaatcttc cgccacaacg atacggcgca cctcgagggg
      721 ctgttgcgcg ctgcgggcga acggcccaag ctgatcgtgt tcgagagcct ctactccatg
      781 gacggcgacg tcgcgccgac ccgggcaatc tgcgagctcg ccgagcgcca tggcgcgatg
      841 acctatatcg acgaggtgca cgcggtcggc atgtacgggc cgcgcggggc cgggattgcg
      901 gcgcgcgacg gcacgatgga gcgaatcgac gtgattgaag gcacgctggc gaaggcgttc
      961 ggcgggctcg gcggctacat cgccggttct ggacgactga tcgacgcggt gcgctcgtat
     1021 gcgccaggct tcatcttcac gaccgcgctg ccgccggcgg tgtgcgcggc ggcgactgct
     1081 gcgattcgtc acctgaaggc ttcggactgg gagcgcgagc gccaccagga ccgcgccggc
     1141 cgcaccaagg cggtgctcgc tgccgccggg ctaccgattc tgcagaacga gactcacatc
     1201 gtgcctgtgt tcgtcggcga tccggagctt tgcaagcagg caagcgacct cctgctcgaa
     1261 cggcatgcga tctacatcca gccgatcaac tatccgaccg tcgccaaggg cagcgagcgg
     1321 ctgcgcatca cgccctcgcc ccatcacgac gacgcgttga tcgacgagct cgccgaggcg
     1381 atggtcgacg tgtgggaaga gctcgggctt ccgttgaacc ggcgcgcgct cgcggcggaa
     1441 taatctgcca ctgttttgcc cccgagtgct ccgggtcgca gtctcgtatg gcctgttgct
     1501 aaggatggga agacagatcc agtcttacca gcgctgcgcc gacgaactgc gcagccccag
     1561 aacataatgc tgacaacgtt ttctcttgcc acttgcggcg gacattcagc aggatgacgg
     1621 ttaccacggc atcattcggc accgccggtc cggcgccttc gcacgtcagc ctcggcggcc
     1681 tcgatgcggc caacttcttc gttgccggca tcctcgccgg attcggtccc tacgtggctg
     1741 cgtatcttgc cgaccagaaa tggagccaag aaaatatcgg cttcgtcctg accgcgagta
     1801 gtctcgcggg cttgctcagt cagctccccg ggggcgaact gctggacacc atccgctcga
     1861 agcgagcgat cgtcgcggca ggcgctacaa tcgtcgccgt cagcgcgatc atcatcgcat
     1921 ttgagccgag gtttccgctg gttttcatcg cgctcatgct gcaaggcatc acgggcggcc
     1981 tactcgggct ggctatcgcc gccattagcc tcggcctcgt cggccagtcg ggattgccgg
     2041 aacggctcgg acgcaatcaa cgtttcgctt ccacgggcag cctggtcgcg gccgccatta
     2101 tggggttgat cggatatttc ctgtcctaca aagcgatctt tgtggcagtc gccgcgctca
     2161 cccctgccct attcgttgcg ctcgcgcgca tccacgcacc cgacgtccac ttcggtcgcg
     2221 cctgcggtgc gccccatcac cacgaatccg gtcagccgga gaggacaaaa cgctggacgc
     2281 tatgccagcg atcggaactg ctcgcctttg ccagctgtct gtttttattt caactcgcca
     2341 acgcttcaat gctgccgctg gtggtagagg ctcttgtcta cgagggggaa aggcgctcct
     2401 cgctcgtcgt ttcggcgttg atcgtcctac cgcagatcct cgtcgctctg ctggccccgt
     2461 gggtcgggcg acaggcgaaa agctggggcc ggcggccgct cctgctgata ggctttggtg
     2521 cgttgccgat ccgcgcgctg ctgttcgccc tggtgctcga tccgccgcta ctcattgtct
     2581 ttcagttgct cgacggcatc agtggagcgg tactcggcgt gctgacggcg ctggtcatcg
     2641 ccgatgtgac gggcggcacg ggccgcttca atttggcgca aggtctggcc ggaacggcgt
     2701 ccggaatcgg ggcttcgcta agcacgacgc tgtttggctt gctggcgggg ggcttcggcc
     2761 gcgccgctgc gtttgtgagt atcgcggcgg tgggcttggt ggcagtcttg atcgtttggt
     2821 tctttatgcc ggaaacgaag ccctcggcaa tgaatgggct gcggtcatgg ccgaagtcga
     2881 gcgcaagcta ggttggcaga gtggtcttcc caaggtgctt tgctacggaa ctacggtaca
     2941 ggctcgcgac gtgcccgtcg cgcgtacgag gactccatca tgtcattcaa ggttcacgtt
     3001 ggcccgccac agatcgccat ccacgagggt cagacggtgc tcgtcagcga gccggacgga
     3061 cggatcacct ggccgagcga gaagggcctg tactttctcg atacgcggat cgtcagcgcc
     3121 tggacgattt acgccaatgg cgaactgtgg gagctattga acggcggccc catcaactac
     3181 cattccgcgc gcatcttcct caccaataag accattttca ccgaagacgg caccatcgcg
     3241 ccgcgcaccc tgggcctgac gatcagtcga tcgatcatcg gcggcatgca tgaggatctc
     3301 gacatcacca acaacagcat gaatgccgtg cgttttcagc tcgaagtggc aatacgatgc
     3361 gattttgccg acatcttcga agtaaagtcg ggccgcatcg tacgccgcgg gcagatcacg
     3421 accgaatggt cgcagcgacg gcagcggctt cataccgtct attccaaccg agattttcat
     3481 cgctcggtga cgatcaccgt gccgcgggcg acgagcaagg ccgtttccgc caatgggcga
     3541 ctcagcttcg aggtcgcgct cggggcgggc gaggcttggc acgcttgttt gctgtacacg
     3601 ctggaggacg gcgaacaacg ctttcacgcg ccgtccgact gcgttgggga ggttcacaag
     3661 tccccctact ctctgactat gaccgaatgg ttgaagaccg tggtcaagat cgagaccagt
     3721 aacgaagagt tctaccgcct ctttcgtcag gcgctggagg atatggcagc gctgcgcctg
     3781 ccgattaggg gcacggacca cacggtgttc ctgccggctg cgggactgcc gtggttcgtc
     3841 gcacccttcg gccgagacag cctgatcgtt tcgctgcaga acattctcgt ctatccggaa
     3901 ttcgctcacg gggcgttgga aattctgggg tcgctgcaag ccaaggacga tgacccatac
     3961 cgcgacgccg aaccgggcaa gatccttcac gaattacggt acggcgagct tgcgcatttc
     4021 aagctgatcc cgcacacccc ttactacgga acggcggatg cgacgccgct ctatttgatc
     4081 acgctgcacg cggcgtggcg cgcgaccggc gacaaagcgt tgctggaacg tcatctgccg
     4141 acggcggaag gctgtctcgc ctggatcgac gaatacggtg accgcgaccg tgacggattt
     4201 caggaatatc agacacgctc tccggccggc tacgagaaca tggcctggaa agattccggc
     4261 gatgcggtca tgtatcccga cggctcgctg gtgaagggac cgaaggcgct gtgcgagctt
     4321 cagggctacg tttacaacgc ctggatccgc atggccgagg cgttcgacgc gctcggcaaa
     4381 cctgagcgcg ccaaggcatt gcgtgccaag gcggccgtgc tgttcgagcg attcaatgaa
     4441 gccttctggg acgaggaatt aggattctac gcctatgcgc tcgacggcga caaaaacaaa
     4501 gtcctgaccg tcgcctccaa ccccggccat tgcctatggt cgggcatcgt gcccagcgag
     4561 cgtgcaaagc gggttgtgga tcgtctgatg gcgcccgaca tgtggacggg atggggcatt
     4621 cgcacgcttt cctccgatca tagggcgttc aatccataca attatcagac cggctcggtg
     4681 tggccgcacg acaacgcgat catcgccatg ggattcaagc gctacggctt tgctgcggag
     4741 gcggcgcgcg tggcgcacga tgtgagcgtg gcggcaagcc atttcctgct caatcagctg
     4801 ccggaacttt acaccgccgc cgagcgcaac gagacgaatt ttccggttca gtatatcggc
     4861 gccaacgtgc cccaggcgtg ggcggccggg tccgtcttca tgctgaccca ggccttgctg
     4921 ggatttcaac cggatgcgcc ccgcaataag ctctatgtcg acccgtcgct tccgtactgg
     4981 ctgcccgatt tgagggtgcg cgatcttcgc atcggcaagc acaagctcga catccggttc
     5041 tggaccgaag gcgatgagac ggaattcgaa gtgatcaagg gagaccccaa ggtcgtcgaa
     5101 cgctgtgaac tgggatccgc gctcgcgcat ctgagggttg cttccgatct gaactagccg
     5161 ccaaacaaac ggtgaccaag cgcgttggtt ggaaagacgg tcaggagagc cgacatggac
     5221 cgagaagata gcgctccttc tctgcgcagc agccgcccgg gcacgtcgcc tggcgggggc
     5281 agcaggtcca ccacaacact tgacgcagac ccggcagcga tcgccaagtg ttttcccaac
     5341 cggcgggctc cgcccgctgt cattgcgatc ttcggtgccg gcggcgatct gaccaagcgc
     5401 ctcgtcgtgc cggcgctcta caatctggtg cgaggcggaa tgctcccgga cagtttcgcc
     5461 atcatcggca tcgaccataa cgagatgacc acgcaggaat ggtgccagag cctgaccgag
     5521 atgatgcaag ggttcgttcg cgccgatggc cgcagcggag caatcgacga gcaggcatgg
     5581 tcatggctca cgcgtcgcat gcactacatg caaggggact tcacgcaggc ggaaacctac
     5641 cgccggctcg acaaactgct gagcgagcaa ttcgcgcgcc agggcggcac ggccaacgca
     5701 ctgttttata tggcggtcgc cgaccgtttc ttcggccccg tgatcgagca actcggcggc
     5761 gccgggctga tgcgacaatc ggagaacgct tggcgacggg tcatcgtcga aaagccgttc
     5821 ggccacgact ttgcctccgc cgcggctctc aatgcacaga tcctcaaagt cctgaccgag
     5881 gatcaaatct atcgtatcga tcacttcctc ggcaaagaaa cggttcagaa catcctggtg
     5941 ttgcgcttcg ccaacggcat cttcgaaccg ctgtggaatc gcgaccacgt cgatcacgtg
     6001 cagattaccg cggcggaaac cgtgggcgtg gagcagcgcg gccggttcta cgaaacgacc
     6061 ggtgcgttac gagacatggt gccgaaccat ctgttccagc tccttgccat gatcgcgatg
     6121 gagccgccga tctcattcga tgccgatgcc gtccgcgcca agaagacgga gctgttccag
     6181 gcggtccatc cgatctcgcc agagaacgcc gtgcgcggcc agtacggagc aggggagctg
     6241 ctcggcaaga aagtcggcga ttaccggcac gaacccaacg tggcgccgaa ttccgcaacc
     6301 gaaacctacg tcgcgctcaa gctcggcatc gacaactggc gctgggcggg ggtgccgttt
     6361 tacctgcgca ccggcaagcg tctttccgcc cgcaccaccg aaatcgccgt gcactttcgt
     6421 caagcgcctt acgcgctgtt ccgggacacg cccgtggatc ggctgcccgc gaacatcctc
     6481 atgctgcgca tccaaccgga tgagggacta tcgctcactt tcagcgccaa gcgcccgggc
     6541 gccgacatcg agatcgccgg cgtcgaaatg gatttcgcct accgggacta tttcgcgccg
     6601 ctggcgtcag tcggctacga gaccctgatc tacgattgcc tgatcggcga tgccacgctg
     6661 ttccagcggg ccgatacggt cgaggcggcg tggtccgcgg ttcaggggct gctggatgcg
     6721 tgggcccgca ctcccgccga cgatttcccc aactatgccg ccggtagcgc cggacccgcc
     6781 gccgccgatc gcctgctcgc ccgcgatggg catgcatggc tgccgatcag ggccgagcat
     6841 caccacccgg ggcacagcac atgagagcct tgagtcgtga tcgtatcgcc ccgagcgagg
     6901 ccaaagcggt tgaatctaac ttaccaaggt cgggggacgc gacggaggtg acatcatgaa
     6961 ggccactcgc atgctgcacg aattgggcca gagcctctgg ctcgacaaca tcacgcgcaa
     7021 tttgttgaac acgggcgtgc tacgccgcta catcgacgag ctctcggtga ctggtttgac
     7081 ctcgaacccg acgatcttcg accacgccat caagaacagc cgcgactacg atgacgcaat
     7141 caaacgcaag ctcgccgagg gcaagtcggg ggaaaagctc ttcttcgagc tcgcgctgga
     7201 ggacctgagg caggcggcgg acctgttccg cccgatttat gaccggactt gcggcgtgga
     7261 cggttgggtt tcgctggagg tttcgccgtt gttggcgcac gataccaaat cgacgattgg
     7321 cgcggccaag gagctgcacg cgcaggcgca gcgtccgaat ctcttcatca aaattccagg
     7381 cactcgcgag ggccttccgg ccatcgaaga ggcgatcttt gcgggggtgc cggtcaacgt
     7441 cacgctcttg ttctccgggg gtcagtacct cgaggccgcc aatgcgttca tgcgcggcat
     7501 tgaacggcgc atcgaagcag gattgagacc cgatgtggca tcggtggcgt cgatcttcat
     7561 cagccgctgg gacgtcgcgg tcaccggcaa ggtgccgaag gcgctcaacg atcggctggg
     7621 catcgccgtc gccaagcggg cgtacaaggc ctatctcggc ttattgagct cgccgcgctg
     7681 gatgcgcgcc tataatgctg gcgcgcgccc gcagcgcctg ctctgggcaa gcactggaac
     7741 caaggatccg gaggcttcgg atgtcctcta catcaagggc ctcgccgcgc cgttcaccgt
     7801 gaacaccatg cccgagggca cgttgaaagc gctcgccgac catggtgacg tcggcgcaac
     7861 gctacccgcc gacggtgg
//
LOCUS       DATCWM010000186         2839 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_347133, whole genome shotgun sequence.
ACCESSION   DATCWM010000186 DATCWM010000000
VERSION     DATCWM010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2839
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_347133"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..342)
                     /locus_tag="VIQ50_03545"
     CDS             complement(<1..342)
                     /locus_tag="VIQ50_03545"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEY9359481.1"
                     /translation="MIDSSTSDRSRFYSVAELANEFALTSQGIRFYEESGLISPARVG
                     RTRVFNYQDRARLMLIQRLRRLGFSIDAIREYLSLYKTDATGATQYRRGLERIAERIR
                     ELEEKRRDLDET"
     gene            605..2386
                     /locus_tag="VIQ50_03550"
     CDS             605..2386
                     /locus_tag="VIQ50_03550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HEY9359482.1"
                     /translation="MTYRAPVNEMLFMMRHVGELERAIEEGIYPDLLIDDVESILQEA
                     ARFSGEVLEPINRTGDRYGAQLRDGAVTTAPGFKEAYQAWAGAGWNALAAPVEYGGQG
                     LPMLLNAGCAEMWNGACLAFGVAPLLTMGGVEALAVHGNEELKQRYLQKLVAGEWTAT
                     MNLTEPQAGSDLSAIRTRAEPCRDGSYRIFGQKIFISYGEHDLTDNIIHLVLARLPDA
                     PKGTRGISLFLVPKILPDGSRNDVRCSGLEHKLGIHASPTCTMVYGDNGGARGWLLGE
                     ENRGLVCMFTMMNSARLSVALQGVAIAERACQDALTFAAERRQGASPSHNGNGMAPII
                     EHADVRRMLATMRGLTNAARAISYVTAQSIDRSHRSQDSAERESASERAALLTPVAKA
                     FATDIAIEVASLGIQVHGGMGFIEETGAAQHLRDARILSIYEGTNGIQAIDLVTRKLP
                     MSGGEAVRRQIDAMRAIAGLLADVDCPTLQAAAPQIAKAIKSLERATMFMLDALAGNV
                     GEAALAGATPYLRLFATAQGGVLLGASALAAHRAASAGDNDPANAGRVQVARFFADNI
                     APSAPGLADVVIGGAASLKEAQRMLAD"
     gene            2430..>2839
                     /locus_tag="VIQ50_03555"
     CDS             2430..>2839
                     /locus_tag="VIQ50_03555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008546313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY9359483.1"
                     /translation="MSRKHWLAAYGEKIPCEINPDSHPSVLAMLEAAMQRFAEKPAFR
                     SFGQTLTYADANRLSRNFAAFLQNKLGVKKGDRIAVMLPNIAAFPLAMLGIVRAGGVQ
                     VNVNPLYTPRELEHQLNDAGVETIVIFNGGSPTLA"
BASE COUNT          538 a          912 c          897 g          492 t
ORIGIN      
        1 ggtctcgtcg aggtcgcgcc tcttttcctc aagctcccgg atgcgctcgg cgattcgctc
       61 gagcccgcga cggtattgcg tcgccccggt cgcgtcggtc ttgtacaggc tcaagtactc
      121 gcggatcgcg tcgatggaaa atccgagccg ccgcagtcgc tgaatgagca tgaggcgcgc
      181 ccgatcctga taattgaaca cgcgggtgcg gcccacgcgc gccggcgaga tgagcccgct
      241 ctcctcgtaa aaacgaatgc cttgcgaggt gagggcaaac tcgttggcca gctcggcgac
      301 gctgtagaag cgcgaacggt cggaagtgct cgaatcgatc atgccgtgaa tgtcgaactt
      361 gcgtcgtaca aagtcaactt taataaacgc cagttagcga aaatcagtta tgcgcacccc
      421 gtaaaattgc cgatggatgc tctacatcga tattttacgt gtttttacag tcgtttaata
      481 aaggttaatt tatttctata aagtgcactt gacatatcgc accaaatgat ctctaagggg
      541 aggcatgcgt acaagcgcgc tgtgccctga cgcgcccagc gaccggactg tgaaaggtga
      601 cgccatgacc taccgcgccc ccgtcaacga gatgctgttc atgatgcgcc acgtggggga
      661 gcttgagcgc gcgatcgagg aaggcatcta tccggatctc ttgatcgacg acgtcgaaag
      721 tattttgcag gaagcggcgc gtttctccgg agaggtgttg gagccgatca accggaccgg
      781 cgatcgttac ggcgcgcagt tgcgcgacgg tgcggtcacg acggcgcccg gcttcaagga
      841 agcttaccag gcgtgggccg gcgccggctg gaacgcgctt gccgccccgg tcgaatacgg
      901 cggacagggc ctgccgatgc tgctcaatgc gggctgcgcc gagatgtgga acggcgcctg
      961 cctcgcgttc ggcgtggccc cgctgctgac tatgggcggc gtggaagccc tcgccgtgca
     1021 cggcaacgaa gagctcaagc agcgctatct gcagaagctc gtcgccggcg aatggacggc
     1081 gacgatgaac ctgaccgaac cgcaggcggg ctcggatctt agcgccatac gcacccgcgc
     1141 cgagccgtgc cgcgacggca gctatcgcat cttcggccag aaaatcttta tcagttacgg
     1201 cgagcacgac ctcaccgaca acatcatcca tctcgtcctg gcgcgcttgc ccgacgcgcc
     1261 aaagggaacg cgcggaattt ccctgttcct ggtgccaaaa attctccccg atggcagccg
     1321 caacgacgtg cgctgctctg gcctcgagca caagctcggc atccacgcaa gcccgacctg
     1381 cacgatggtt tacggcgata acggcggcgc gcgcggttgg ctgcttggcg aggaaaatcg
     1441 cggcctcgtc tgcatgttca ccatgatgaa cagcgcgcgc ctctcggtcg cgctgcaggg
     1501 cgtcgcaatc gccgagcgcg cctgccagga cgcgctcaca ttcgccgccg agcgccgcca
     1561 aggcgcatcg ccgagccaca acggcaacgg catggcgccg atcatcgagc acgccgacgt
     1621 gcgccgcatg ctggcaacga tgcgcggcct gaccaacgcc gcacgcgcga tctcgtacgt
     1681 gaccgcgcag tcgatcgacc gttcgcatcg aagccaggac tccgccgagc gggagtcggc
     1741 gagcgagcga gccgcgctgt tgacgcccgt cgccaaggca ttcgccacgg acatcgcgat
     1801 cgaagtggcc tcgcttggca tccaggtgca cggcggcatg ggcttcatcg aggagaccgg
     1861 cgccgcccag catctgcgcg acgctcggat tctttcgatc tacgaaggca ccaacggtat
     1921 ccaggcgatc gatctggtga cgcgcaagct cccgatgtcg ggcggcgagg cggtgcgcag
     1981 gcagatcgac gcgatgcgcg caatcgcagg cctcctggcc gacgtcgact gcccgaccct
     2041 gcaggcagcg gcgccacaga tcgccaaagc catcaagagt ctcgagcggg cgacgatgtt
     2101 catgctcgac gcgctggccg ggaacgtcgg cgaggcggcg ctcgctggag ccactcccta
     2161 tctgcggctg ttcgcgaccg cgcaaggggg cgtgttgctc ggtgcgtccg cgctcgcggc
     2221 gcatcgcgca gcgagcgcag gcgacaacga tcccgccaat gcgggccgcg tgcaggtcgc
     2281 gcggttcttt gccgacaaca tcgcgccgag cgcgcctggc ctcgcggacg tggtgatcgg
     2341 cggtgccgct tcactgaagg aggcgcaacg gatgttggcc gactgacagg aatgccgagc
     2401 gcggtcacgg atggaaggga ggaaatacca tgtcacgtaa gcactggctc gccgcctacg
     2461 gcgaaaaaat tccctgcgag attaatcctg attcccatcc ctctgtgctc gcgatgctcg
     2521 aagccgccat gcagcggttc gccgaaaaac ccgcgtttcg ttcgttcggc cagacgctca
     2581 cctatgccga tgccaaccgg ctttcgcgca actttgcggc cttcctgcag aacaagctcg
     2641 gggtgaagaa gggcgaccgt atcgccgtga tgctgcccaa cattgcagcc ttcccgctgg
     2701 ccatgctcgg gatcgtccgc gccggcggcg tgcaagtgaa cgtgaacccg ctctacacgc
     2761 cgcgcgagct cgagcatcag ctcaacgacg ccggggttga gactatcgtc attttcaacg
     2821 gcggctcgcc tacgctcgc
//
LOCUS       DATCWM010000187         2858 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_190430, whole genome shotgun sequence.
ACCESSION   DATCWM010000187 DATCWM010000000
VERSION     DATCWM010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2858
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190430"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            905..2365
                     /locus_tag="VIQ50_03560"
     CDS             905..2365
                     /locus_tag="VIQ50_03560"
                     /inference="COORDINATES: protein motif:HMM:NF006056.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9359484.1"
                     /translation="MAGKIRIGRRAFLGGVAALGAMQGLRMPAQAAVSPSVANLPARS
                     NVVIRNAYMMTMEPGQPDLPNGDVHVDNGLIVDVGTALAAPGAQIIEGRGFIVMPGLI
                     DTHWHMWTTLLRNMSGDDRAHGYFPMTTALGKVYTPRDMYYGTLLSSAEALHSGITTV
                     HNWCHNIMTYEHAVEDLRAMQESGLRGRFSFGPARSTPLTQPFSVTDLERMHGDWASL
                     SNEGLLTLGIAWRGVQAALPNTEGKMELRPLSPDMYRVEYEAARRLGLPVSVHLNSTK
                     FDNSHIIALQKLGYVFDGLQVIHAINTSPEEMDILAAAGASVSISPASEMRIGFGLPK
                     IAEFLDHKVNLALSVDTTPLTGNADMFGIMKLAQNLENGRSESEFKLPARKVVELATI
                     EGAKALGLADRTGSLRKGKRADVIMVNTREVNIGPFTEPAYMLVDSAQASNVDTVLVD
                     GRILKRNGKLTAIDVGKLMDEASAASQSIKQRANWK"
     gene            complement(2377..>2858)
                     /locus_tag="VIQ50_03565"
     CDS             complement(2377..>2858)
                     /locus_tag="VIQ50_03565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HEY9359485.1"
                     /translation="RKIYWALVAGVPKPLQGRISTFLAKETREDDSFMRVARHGEEGA
                     SHAVTYYAVIDTAARQLAWVSLKPVTGRTHQLRAHLAHIGHPIVGDPKYFSKENWQLP
                     GGMQNRLHLLARRIAVPHPRGGVIDVTAALPPHMRQSWNLIGLDAERYDPIVEAPEE"
BASE COUNT          586 a          898 c          864 g          510 t
ORIGIN      
        1 tcccctgtgt ttgatcgaag aattcgacgc ttaaagttca cctgtgacgt tcgttcacgt
       61 tcactgcggc agaccaaaac cggagctgat tttgcccgcc cgagcattcc caacaggaca
      121 tatgagtgat ctcagctgag aaatatcgcc ggggattgtc ttgatttatg cgatcttgcg
      181 aaatcatctg ccagaatttg cggtgccaag tgagtcaagc cggcgtcgca tcggtaaata
      241 agtgtctcaa ttcagggtga atgcagtgtg cctcgatatg gctgcagaca tgatgcggcg
      301 atcgttccgc cgtcgcctcc agagcggaga actgcaccgt cacgagtgag ggacggttcc
      361 ccggcgccgc gtggtgagcc tgcagtaagc cacggaacta tcgagggttt tgcgggtaat
      421 agccgccgca aaatatcgct cttgactcat gtaaccagaa tcttccagaa gagcgtattc
      481 actcaccgaa actgcgcgag ctgcccgggc gggacgactg caccggattt tttgctgcag
      541 cgacacaagc tgcgccggcg tatttctttc gagaacggaa aggcatacgc gggtgcagct
      601 tgataagagc gaacgcggaa atccggccga gcgcttgccc aagctcgaaa agcaaaatca
      661 accgatgacg cccaccgtga tgcaaaccgt cggttgtaga gaccgaaggg tcattgtttc
      721 gggattgtta ttaacaatga aaataccaac cacaacgtgt ggagtggcag cagcccaccg
      781 aagcgtccgg cttcctgccg gctcagaatg cgcctacttt ccacgccagt cctgtggtca
      841 tcaggcgaaa ccagaccaat tgcgcgcccc gccaaaaatg ggacgcgacc aaggggagga
      901 caacatggcc ggcaaaatca gaatcggtcg gcgcgcattt ctcggcggcg ttgcagccct
      961 cggcgcaatg cagggtttgc gcatgcctgc ccaggcggcg gtctcgccgt cggtcgccaa
     1021 tctgccggcg cgcagcaacg tcgtcatccg caacgcctac atgatgacga tggagcccgg
     1081 ccagccggac ctgccgaatg gcgacgtgca cgtcgacaat ggactgatcg tcgacgtcgg
     1141 caccgccctg gccgcgccgg gcgcgcagat catcgaaggg cggggcttca tcgtcatgcc
     1201 cggcctgatc gacacccact ggcacatgtg gacgacgctc ttgcgcaaca tgtcgggcga
     1261 cgaccgcgca cacggctatt ttccgatgac caccgcgctc ggcaaggtct acacgccgcg
     1321 cgacatgtat tacggcacgc tgctctcctc ggcagaagcg ctgcactcgg gcatcacgac
     1381 ggtgcacaat tggtgccaca acattatgac ctacgagcac gcggtcgagg acctgcgggc
     1441 aatgcaggag agcgggttgc gcggtcgctt ctcgtttggc ccggcgcgtt caacgccgct
     1501 aacccagccg ttcagcgtca ccgacctcga gcgcatgcat ggcgactggg ccagcctgtc
     1561 gaacgaaggc ctgctgacgc tcggcatcgc ctggcgcggc gtgcaggccg cgttgccgaa
     1621 cacggaaggc aagatggaac ttcgtccgct gtcgccggac atgtaccgcg tcgagtacga
     1681 ggccgcgcgc cggctagggt tgccggtctc ggtccatctc aattccacaa aattcgacaa
     1741 cagccacatc atcgcgctgc aaaagctcgg ctacgtcttc gacggcctgc aggtcatcca
     1801 cgccatcaac acctcgccgg aagaaatgga catcctcgcc gctgccggcg cctcggtcag
     1861 catctcgccg gcctccgaga tgcgcatcgg cttcggcctg cccaagatcg ccgaattcct
     1921 cgatcacaag gtcaatctcg ccctgtcggt cgacaccacg ccgcttaccg gcaatgccga
     1981 catgttcggg atcatgaagc tggcgcagaa tctcgagaac ggccgcagcg agagcgaatt
     2041 caaactgcca gcgcgcaagg tcgtcgagct tgcgacgatc gaaggcgcca aggcgctggg
     2101 tctcgccgat cgcaccggct cactcaggaa aggcaaacgc gccgacgtca ttatggtgaa
     2161 cacccgtgag gtgaatatcg ggccgttcac cgaaccggcc tacatgctcg tcgattcggc
     2221 gcaggcgtcg aacgtcgaca ccgttctggt cgacggccgc atcctcaagc gcaacggcaa
     2281 gctgaccgcg atcgacgtcg gcaagctgat ggacgaggca tccgccgcca gtcaatccat
     2341 caagcagcgc gccaactgga agtaattcgc ccctagctat tcctccggcg cctcgacgat
     2401 gggatcgtag cgttcggcgt cgaggccgat caggttccac gactgacgca tgtgcggcgg
     2461 cagcgccgcg gtgacgtcga ttactccgcc gcgcgggtgc ggaacggcga tgcgccgcgc
     2521 caacaggtgc agccggttct gcatgccgcc cggcagctgc cagttctctt tggaaaaata
     2581 cttcgggtcg ccgacaatgg gatggccgat atgcgccaag tgcgcccgca attggtgggt
     2641 gcggccggtc accggcttga gcgagaccca ggcgagttga cgcgcggcgg tgtcgatcac
     2701 ggcgtaatag gtcacggcgt ggctggcgcc ctcctcgcca tggcgcgcaa cgcgcatgaa
     2761 cgaatcatcc tcccgcgtct ccttggcgag gaaggtcgag atgcgtccct ggagcggctt
     2821 cggcacgccg gcgaccaggg cccagtagat ttttcgcg
//
LOCUS       DATCWM010000188         2383 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_390182, whole genome shotgun sequence.
ACCESSION   DATCWM010000188 DATCWM010000000
VERSION     DATCWM010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2383
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_390182"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..205)
                     /locus_tag="VIQ50_03570"
     CDS             complement(<1..205)
                     /locus_tag="VIQ50_03570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359486.1"
                     /translation="MAIPLRERLLGRFARLTNQFRVWYRLPFLLAMPTLVGHRVNMRE
                     HNLSDTERDPALLKPLGGASPRDQ"
     gene            complement(430..1350)
                     /locus_tag="VIQ50_03575"
     CDS             complement(430..1350)
                     /locus_tag="VIQ50_03575"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HEY9359487.1"
                     /translation="MKAVFIERYGGPDVLRYGDFPDPVAAPGEVVINVHAASVNAADW
                     KVRTGQYEPTKFPLILGRDFSGVVATVGAGVADLKLGEAVFGVHEAGQEGAYAEKIAV
                     KAAIVARKPERLSHVNAAALALTGLTALSAVEDTLKLRPGETILIQGGAGGVAGFAIQ
                     LAKHIGAHVMTTASAANRDYVRGLGADEVIDYNAVDFTQAARNCDAVFDTVGGDVAQR
                     SFAVLKPGGRAVFIASGAQAPKSPRDDVASLRPPVKRARRPLERIVELFEAGAIRVPQ
                     IKLYRLPDAADAHRLSESRHFRGKLVFQVR"
     gene            1480..2010
                     /locus_tag="VIQ50_03580"
     CDS             1480..2010
                     /locus_tag="VIQ50_03580"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010909973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEY9359488.1"
                     /translation="MGWVTRIGIGRQSFPRLRPWPRPRMHLNSRRWLIRALFVATGLL
                     GLNAPAAHANVLIAIDKSTQQMSVSVDGVPRYRWVVSTGRAGYGTPSGTYRPQRMERT
                     WFSKEYYNSPMPHSIFFHGGYAIHGSYEIHRLGGPASHGCIRLHPANAATLFALVRQR
                     GMGDTVIVVSGGHRSW"
     gene            2171..>2383
                     /locus_tag="VIQ50_03585"
     CDS             2171..>2383
                     /locus_tag="VIQ50_03585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359489.1"
                     /translation="MTLRSIGIIIAAFGIAAASPARAEDLLVTQYKNDPSGAPYGIAL
                     EKGFFKAHGLDITGIISGAGGGSSVRN"
BASE COUNT          421 a          792 c          753 g          417 t
ORIGIN      
        1 gctgatcgcg ggggctggca ccgccgagcg gcttgagcag cgcgggatcg cgttcggtgt
       61 cggaaagatt gtgctcgcgc atattgacgc gatggccgac gagcgtcggc atcgcgagca
      121 ggaagggaag ccgataccaa acgcggaatt gattggtcag cctggcgaaa cgtccgagca
      181 accgctcgcg cagcggaata gccacgtttc ccctcccttt cgatattcgc gctacatcat
      241 gacctcgtgc ccgctgtgct ccccagcctc ggaacggaac gccgcttgcg cggttctgga
      301 atttttatat tgcaactaac gactctcggt tgcaataggc gactcgcgtt acgcgccgat
      361 gacgcatcag aatatcgtga gatcgcggaa ccgagcgccg cgcaagcgcg agaggaaacg
      421 ccgcccgcgt caacgcacct ggaacacgag tttgccgcgg aagtggcgcg actcgctcag
      481 ccggtgcgcg tcagcagcat cgggcaggcg ataaagcttg atctgcggca cgcgtatggc
      541 gcccgcctca aacaattcga cgatgcgctc gagcggccgg cgggcgcgct tgaccggggg
      601 cctgagcgag gcgacatcgt cgcgcgggga cttcggcgcc tgtgcccccg aggcgatgaa
      661 gaccgcgcgt ccgcccggct tgagcaccgc gaacgagcgc tgcgccacgt cgccgccgac
      721 ggtgtcgaag acggcgtcgc aattgcgcgc ggcttgcgtg aaatccaccg cattgtagtc
      781 gatgacttca tcggcgccga gcccgcgcac gtaatcgcgg ttcgccgcac tcgcggtcgt
      841 catcacgtgc gcgccgatat gcttggcgag ctgaatggcg aagccggcaa ccccgcctgc
      901 cccgccctgg atgagaatcg tctcgccggg cctgagcttc aacgtgtctt cgacggcgct
      961 gagcgcggtg aggccagtga gcgcgagggc ggcagcgttg acgtgcgaga ggcgctccgg
     1021 cttcctcgcg acgatcgcag ccttgaccgc gatcttctcc gcatacgccc cctcttggcc
     1081 cgcctcgtga actccgaaca ccgcctcgcc aagcttgaga tccgcaacgc cggcgccgac
     1141 ggtagcgacc acgccagaaa aatcccgtcc caggatcaat gggaacttcg tcggttcgta
     1201 ttgaccggtg cgcaccttcc aatccgcggc attgacgctg gcggcgtgga cgttgatgac
     1261 cacctcgccg ggcgcggcca cgggatccgg aaaatcgccg tatcgcagca cgtccggccc
     1321 gccatatcgt tcaatgaaaa cagccttcat gttttgcccc tgtgatccat gcgtgcgcca
     1381 aaggctccat ttccacctac tcgatcgcgg tcccgcggtc cacgccgatt gaggatgttc
     1441 gcctccatgt taggatgggc gagaaacgcg aggcgcgata tgggctgggt tacccgcatt
     1501 ggaattgggc ggcaaagctt cccgcggctt cgcccatggc cgcggccgcg catgcacctc
     1561 aactcgagac gatggctcat acgcgctctt tttgtcgcca cggggctgct cggcctcaac
     1621 gcccccgccg cccatgccaa cgtcctcatc gcgatcgaca agagcacgca gcagatgtcg
     1681 gtgtcggtcg atggcgtgcc gcgctaccgc tgggtggttt ccaccggccg cgccggctac
     1741 ggcaccccaa gcggcaccta tcgaccgcag cgaatggaaa gaacgtggtt ctcgaaggag
     1801 tactacaact cgcccatgcc gcactcgatt ttcttccacg gcggctatgc gatccacggc
     1861 agctacgaga tccatcgcct cggcggcccc gcctcgcacg gctgcatcag gctgcatccc
     1921 gccaacgccg ccacgctgtt cgcactggtc aggcagaggg ggatgggcga tacggtcatc
     1981 gtcgtgtcgg gcggccaccg ctcctggtaa gcgcccgcga cggctggatc aggaccggcc
     2041 gcgctggcct caccggaccc tccggcctcc tgcggcaata gttccattat actgccgcgg
     2101 ttgcgcgggt tacgctctct gggatcgcat caggcggaag cggcggcgga catagtgtag
     2161 gaggacgcgt atgactctca ggagcatcgg catcatcatc gcagcttttg ggattgctgc
     2221 ggcttctccg gcgcgagccg aggatctgct cgtgacgcaa tacaagaatg atccctccgg
     2281 cgccccatac gggatcgcgc tggagaaggg tttcttcaaa gctcatgggc tcgacatcac
     2341 cggcatcatc tccggggcgg gcggcggcag ctcggtgcgc aac
//
LOCUS       DATCWM010000189         3053 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_325581, whole genome shotgun sequence.
ACCESSION   DATCWM010000189 DATCWM010000000
VERSION     DATCWM010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3053
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_325581"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..324
                     /locus_tag="VIQ50_03590"
     CDS             <1..324
                     /locus_tag="VIQ50_03590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007615720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="benzoate-CoA ligase family protein"
                     /protein_id="HEY9359490.1"
                     /translation="YYCGRTDDMFKVSGMWVSPFEVEAALTSHEAVMDAAVIGKEDGD
                     GLVKPKAFIVLKNGYAADELLVDALRSHVKERAGPWKYPRWIEVRPDLPRTATGKIQR
                     FKLRD"
     gene            362..1501
                     /locus_tag="VIQ50_03595"
     CDS             362..1501
                     /locus_tag="VIQ50_03595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_function: GO:0019213 - deacetylase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase/deacetylase family
                     metallohydrolase"
                     /protein_id="HEY9359491.1"
                     /translation="MSYDLILRGGRVVDPSQKLDAVTDVAFADGKVARIGAGLRTEAK
                     TDVRDVSGRIVTPGLIDLHTHVYWGGTSLGIDAEDFCRRSGVTTAVDTGSAGAGNFAG
                     FRKHVIERSEVRILAYLHVSFAGIFAYSRRVMVGESEELRLMAPLDAVEVANANRDVI
                     IGIKVRVGARASGRSGTVPLDIALEVAGEVGMPVMAHIDEPPPSYEEVIARLRPGDVL
                     THAFRPFPNSPATAQGTVKRAVIEARQRGVLFDIGHGKGSFAFKTARAMLANGFLPDT
                     ISSDVHALCINGPAFDQVTTMSKFLCLGMPLADVVAASTVNAAFALKRPELGSLKPGS
                     IGDATILSIDDGRFDYVDVVGEHMTGDRKIACQGVVIAGRWWHPK"
     gene            1685..>3053
                     /locus_tag="VIQ50_03600"
     CDS             1685..>3053
                     /locus_tag="VIQ50_03600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015687166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359492.1"
                     /translation="MDRRTLLKGFAGAGTLAATGRLCAPALAQGTAARTLRFVPQANL
                     ANFDPIWGTQYVVRNASAMVWDTLYGMDEKLEPQRQMAEAEEVSADGLTWTFRLRPGL
                     KFHDGEPVLARDVVASLERWTARDQMGLLIRAIQQELTAPDDRTVKWVLKQPFPKMLL
                     ALGKISTPIAFIMPERVAKTDPFKQISEYIGSGPMRFVKNEWVPGAKAAFERFPDYAP
                     RSEPGSWLAGGKRMLAERVEWVVMPDPATAGAALQSGEIDWWENPISDLVPLLRKNRN
                     VAVDIADPLGNIGSFRMNHLYPPFNDVRARRAVLMAMSQEDYMRAIVGDDDNLWKPLP
                     GFFTPGTPLYTEEGGEILKGPRKLDAAKKLLAESSYAGQPVTCLVAQDQQITKAQGDV
                     TADLLKRLGMNVDFAAIDWGTVGARRAVKTPPGQGGWQMFHTWHSGADCINPAVAIGV
                     RASGDK"
BASE COUNT          556 a          974 c         1007 g          516 t
ORIGIN      
        1 tattactgcg ggcgcaccga cgacatgttc aaggtcagcg gaatgtgggt gtcgcccttc
       61 gaggtcgagg cggcgctcac gtcgcacgag gccgtgatgg atgccgcggt catcggcaag
      121 gaggacggcg acgggctggt caaaccgaaa gccttcatcg tgctcaagaa cggatacgcc
      181 gccgacgaat tgctggtgga cgcgttgcgc tcgcatgtga aggagcgggc ggggccgtgg
      241 aaatatcccc gttggatcga ggtgcggcct gacctgccgc gcacggcgac tggcaagatt
      301 cagcgtttca agctgagaga ttgatgtcct ctctcggacg ccgcacccgg agaatctgcc
      361 gatgagctac gacctcatcc tgcgcggcgg ccgcgtagtc gacccctcgc aaaaactcga
      421 tgccgtaacg gacgtcgcct tcgcggacgg caaagtcgcc cgcatcggag cagggctgcg
      481 cacggaggcc aagaccgacg tgcgcgacgt ctccggccgc atcgtcaccc cggggctgat
      541 cgacctgcac acccatgtct attggggcgg gacctcgctc ggcatcgacg ctgaggactt
      601 ctgccgccgc tcgggcgtca cgaccgccgt cgataccgga agcgccggcg ccggcaactt
      661 cgcgggcttt cgcaagcacg tgatcgagcg cagcgaggtg cgcatcctcg cctacctcca
      721 cgtctccttc gccggcatct tcgcgtactc gcggcgggtg atggtcggcg aaagcgagga
      781 gctgcggctg atggcgccgc tcgatgcggt ggaggtcgcc aatgccaacc gcgacgtcat
      841 catcggcatc aaggtccgcg tcggcgcgcg cgcctccggc cgttcgggca ccgtgccgct
      901 cgacatcgcg ctcgaggtcg cgggcgaggt cggcatgccg gtcatggcgc atatcgatga
      961 gcccccgccg agctatgaag aggtgattgc gcggctgcgg ccgggggacg tgctcaccca
     1021 tgcgttccgg cctttcccca actcgccggc cacggcgcaa ggcacggtga aacgcgcggt
     1081 gatcgaagcg cgtcagcgag gcgtcctgtt cgacattggc catggcaagg gctcgttcgc
     1141 cttcaagacg gcgcgcgcca tgctcgccaa cggctttttg cccgatacca tctcgtccga
     1201 tgttcacgcg ctctgcatca acggaccggc attcgaccag gtcaccacga tgtcgaagtt
     1261 cctctgcctc ggcatgccgc ttgccgacgt ggtcgccgcc tcgaccgtga atgccgcatt
     1321 tgcattgaag cgcccggaac tcggcagtct caagccgggc agcattggtg acgccaccat
     1381 tctgtcgatc gacgatgggc ggttcgacta tgtcgacgtc gtcggcgaac acatgacggg
     1441 cgaccgaaag atcgcatgcc aaggggtcgt gatcgccgga cgatggtggc acccgaaata
     1501 gtcacaccgt cggagcgaaa ttcgcgttcg ctggcgtatc gtctgctggc atgccctttg
     1561 ctcagaacgg ctggaaaccg gctggttacg ctgccctcac tcgaccccag gggaggcatc
     1621 caataaaatg ggcagaatgg cgcaaatctg agcgagtcga ccggtgcaac tgggagatca
     1681 agtcatggat cgcaggacgc tgctgaaagg ctttgcgggt gcaggcactc tggccgctac
     1741 gggacgcttg tgcgcccctg cgctcgccca gggcactgca gcgcgcacgt tgcgcttcgt
     1801 gcctcaagcc aatctcgcga atttcgaccc gatctggggc acgcaatacg tggtgcgcaa
     1861 tgcctcggcc atggtgtggg acacgctcta tggcatggac gaaaagctcg agccccaacg
     1921 ccagatggcg gaagccgagg aggtctcggc cgacgggctg acctggacgt tccgcttgcg
     1981 gccggggctc aaattccatg acggcgagcc ggtgctggca cgagacgtgg tggcgagcct
     2041 cgagcgctgg accgcgcgcg accagatggg cctgttgatc agggcaatcc agcaggagct
     2101 caccgctccc gacgatcgca ccgtcaagtg ggtgctcaag cagccattcc cgaaaatgct
     2161 gctggcgctc ggcaagatca gcacgccgat cgccttcatc atgcccgagc gcgtcgccaa
     2221 gaccgatccg ttcaagcaga tttccgaata tatcggcagc ggccccatgc gtttcgtgaa
     2281 gaacgagtgg gttccgggcg cgaaggcggc gttcgagcga ttccccgatt atgcaccgcg
     2341 cagcgagccc ggctcatggc tcgcgggtgg caagcgaatg ttggccgaac gcgtcgaatg
     2401 ggtggtcatg ccggacccgg cgaccgccgg cgcggcgctg cagagcggcg agatcgactg
     2461 gtgggagaac ccgatttccg acctggtgcc gctgttgcgc aagaatcgca atgtcgccgt
     2521 cgatatcgcc gatccgctcg gcaacatcgg cagcttccgc atgaatcatt tgtatccgcc
     2581 gtttaatgac gtgcgggcgc gccgcgcggt gctgatggca atgagccaag aagactacat
     2641 gcgtgccatc gtcggcgatg acgacaatct gtggaagcca ctgccgggct tttttacccc
     2701 gggcacgccg ctctacaccg aggagggcgg cgagatcctc aagggcccac gcaaactcga
     2761 tgccgccaag aaactgctgg cggaaagcag ctatgcgggc cagccggtga cctgcctcgt
     2821 cgcccaggac cagcagatca ccaaggcgca gggcgacgtc accgccgacc tcctcaagcg
     2881 gctcggcatg aatgtggact tcgcagccat cgactggggc acggtcggcg cgcggcgcgc
     2941 ggtgaagacg ccgcccggtc aaggcggctg gcagatgttc catacttggc attccggcgc
     3001 cgactgcatc aatccggcgg tcgcaatcgg cgtgcgcgcc agtggcgaca agg
//
LOCUS       DATCWM010000190         6523 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_309384, whole genome shotgun sequence.
ACCESSION   DATCWM010000190 DATCWM010000000
VERSION     DATCWM010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6523
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_309384"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..791)
                     /locus_tag="VIQ50_03605"
     CDS             complement(<1..791)
                     /locus_tag="VIQ50_03605"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012042049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HEY9359493.1"
                     /translation="MRTMTCIEDLRRAAARKVPRAFFDYAEAGSYGEGTLRANRAELD
                     RIKLRQRVLVDVSQRDLATTIMGERISLPLALAPIGLCGMQHGDGEILACRAAQAAGI
                     PFTLSTMSICSIEDVAQAVDKPFWFQLYVMKDRGFIRALIERAAAAKCSALMLTVDLQ
                     VLGQRHCDIRNGMTVPPQIKFANMIDIATKPAWALSVLRGKRKTFGNLAGHVRGMENV
                     NSLAQWTSSQFDPTLSWKDVEWIRGLWPGKLILKGILDVEDARTAA"
     gene            950..1099
                     /locus_tag="VIQ50_03610"
     CDS             950..1099
                     /locus_tag="VIQ50_03610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359494.1"
                     /translation="MADPKHTAQEEPDAKTKPNREDAHQRRLERSLEQGLEDSFPASD
                     PVNVT"
     gene            1280..2620
                     /gene="glmM"
                     /locus_tag="VIQ50_03615"
     CDS             1280..2620
                     /gene="glmM"
                     /locus_tag="VIQ50_03615"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEY9359495.1"
                     /translation="MARKYFGTDGIRGRANGIITPELALKVGQAAGLIFRRGDHRHRV
                     LIGKDTRLSGYMIETALVAGFTSVGMDVFQTGPMPTPAVAMLTRSMRADLGVMISASH
                     NPYDDNGIKLFGPDGFKLSDEVEYKIEELVDSELVKMLAKSADLGRARRIDDGQGRYV
                     EFAKRTLPRNLSLEGLRVVVDCANGAAYKVAPQALWELGAEVISLGVEPDGFNINREC
                     GSTEPAPLCRKVKEMRADIGIALDGDGDRVLIVDERGHIVDGDQLLAVIAESWKADGR
                     LAKPGIVATVMSNLGLERYLGTLEISLARTPVGDRYVLEHMRAHGFNVGGEASGHIIL
                     SDYTTTGDGLLTALQVLAVVKKLEQPVSSVCHRFDPLPQVLKNVRYGSGKPLESAKVR
                     NAIKDAQARLDGHGRLIVRSSGTEPVIRVMGEGDDKMLVEEVVDGIVDALTSAA"
     gene            2824..3039
                     /locus_tag="VIQ50_03620"
     CDS             2824..3039
                     /locus_tag="VIQ50_03620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEY9359496.1"
                     /translation="MIVCSCNVLSDHDVRAALGRDTAPRNAGQVYGCLGCSPQCGRCA
                     RTIRRIMDEATAAAACARCPAAGPAAE"
     gene            3155..3646
                     /gene="bfr"
                     /locus_tag="VIQ50_03625"
     CDS             3155..3646
                     /gene="bfr"
                     /locus_tag="VIQ50_03625"
                     /EC_number="1.16.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HEY9359497.1"
                     /translation="MQGDARVIEYLNRGLRHELAAINQYWLHYRLLDNWGYRALAKKW
                     RQESIEEMQHADKIVVRIIFLDGFPNMQVLDPLRIGQNVREVLDCDLAAEMSARALYQ
                     EAATHCHAVRDYVTRDLFEKLMHDEEEHIDYLETQLDLVAKLGLELYAQYHIGETDDD
                     HAD"
     gene            3818..4990
                     /locus_tag="VIQ50_03630"
     CDS             3818..4990
                     /locus_tag="VIQ50_03630"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HEY9359498.1"
                     /translation="MSNAMPTVRPLVPHFSSGPCAKRPGWSLSALTDAVLGRSHRAKI
                     GRAKLTRAIDLTREVLEVPATYRIGIVPASDTGAVEMALWSMLGARPVTVLAWESFGE
                     GWASDITKELKLPDVTVLRAAYGELPGLANVDPASDVIFTWNGTTSGVRVPNADWIAA
                     DRVGLSICDATSACFAQQLDWPKLDVVTFSWQKALGGEAAHGMLILSPRAVERLETYA
                     PPRPLPKIFRLTKGGKLNQGIFEGETINTPSMLCVEDYLDTLAWAKSIGGLEALIARA
                     DANAKVIADWVAATPWIEFLARDPALRSNTSVCLKVVDPSVAKLAPDAQAAFVKGIAA
                     TLEKEAVAYDIAAYRDAPPGLRIWCGSTVERADVEALTLWLDWAFAKSKDARPQAA"
     gene            5061..>6523
                     /gene="serA"
                     /locus_tag="VIQ50_03635"
     CDS             5061..>6523
                     /gene="serA"
                     /locus_tag="VIQ50_03635"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013504175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004617 - phosphoglycerate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HEY9359499.1"
                     /translation="MSPNVLISDALSPAAVQIFKDHGIGVDFQPKLGADKERLAQVIG
                     DFDGLAIRSATKVTPKVLEKANRLKVIGRAGIGVDNVDIPAATAKGIIVMNTPFGNSI
                     TTAEHAITLMLALARQIPQADASTQAGKWEKNRFMGVEITNKTLGVIGCGNVGSIVVN
                     RAIGLKMKVIAYDPFLSPERATELGVDKVDLAELLRRADFVTLHTPLTEKTKGIIDGR
                     AITAMKKGVRIVNCARGGLVDEEALRAALDSGHVAGAAFDVFTEEPATENPLFGHPNV
                     VCTPHLGAATTEAQENVALQIAEQMSDYLLRGAISNAVNFPSISAEEAPRLRPFIELA
                     EKLGSFAGQLTETGILKAQLSYEGGVAGMNTKALTSAAIAGLLRPMLQEVNVVSAPIV
                     AKERGIVIEEMTRAAASDYGNLITVTVVTERQTRSVSGTVFADGRPRIVNIKGIRIDA
                     GFGRSMIYITNLDKPGFIGRFSSTLGDAGINIATFHVG"
BASE COUNT         1196 a         2100 c         2095 g         1132 t
ORIGIN      
        1 gcggcggtcc tcgcgtcctc gacgtcgagg atgcccttga ggatgagctt gccgggccac
       61 aggccgcgga tccactcgac gtccttccaa ctcaacgtcg gatcgaattg actcgaggtc
      121 cattgtgcca gcgaattgac gttttccatg ccgcgcacat gcccggcgag gttgccgaag
      181 gttttgcgct tgccgcgcag gaccgacagc gcccacgccg gtttggtcgc gatatcgatc
      241 atgttggcga acttgatctg cggcggcacc gtcatgccgt tgcggatatc gcaatggcgt
      301 tggccgagca cctgaaggtc cacggtgagc atgagcgcgc tgcattttgc cgccgcggcg
      361 cgctcgatca gcgcgcggat gaaaccgcgg tccttcatca cgtagagctg aaaccagaac
      421 ggcttatcga ctgcttgcgc aacgtcctcg atcgagcaga tcgacatggt ggagagcgta
      481 aacgggatgc cggctgcctg cgccgcccga caggcgagaa tttcgccgtc gccgtgctgc
      541 atgccgcaaa gcccgatcgg cgcgagcgct agcggcaacg aaatccgctc gcccatgatg
      601 gtcgtggcga gatcgcgttg cgagacatcg acgagcacgc gctggcgcag cttgatgcga
      661 tcgagctccg cgcggttggc gcgcagcgtc ccctccccgt aagagccggc ctcggcgtag
      721 tcgaaaaagg cgcgcggcac cttgcgggcg gccgcccgtc gcaggtcctc gatgcaagtc
      781 atggtccgca tggtcgcgat ttgtagcacg atcaagcatt agggatgagt aatcaggagt
      841 aggggaagcc gcctgatggc cgagtgccgc gtccccaaac ccggacgcag gccacgcccg
      901 gggcgttgtt tacacgcagg cgccgcgcgg atgcagcttg cgggagagca tggcagatcc
      961 gaaacacacc gcccaggagg agcccgacgc aaagaccaag cccaatcgcg aggacgcgca
     1021 ccaacgcagg ctcgagcgct cgctcgaaca aggtctcgag gacagctttc ccgcgtccga
     1081 tccggtcaat gtcacttagc cggcacccgc gcgtcgcaag accgagagaa aatagcaaat
     1141 ccagccgctt aggagcgccg cagcttcggt gccggaaccc ttatccatac ccgcggaaac
     1201 tcctcgtttt ttttgaagat ttcaggcaat tgacctatca ttcggtgggg caacgtcgcc
     1261 gctcgtgggg gtggggaaca tggctcgaaa gtactttggg accgacggca tccgcggccg
     1321 tgccaatggg atcattaccc cggaactggc gctcaaggtg gggcaggcgg cggggttgat
     1381 ctttcgccgc ggcgaccatc gccaccgcgt gcttatcggc aaagacaccc gcctctccgg
     1441 ttacatgatc gagacggcgc tggtggccgg cttcacctcg gtggggatgg acgtattcca
     1501 gaccgggccc atgccgacgc ctgcggtcgc catgctcacg cgctccatgc gcgccgatct
     1561 cggcgtgatg atttccgcct cgcacaaccc ctacgacgac aacggtatca agctgttcgg
     1621 gcccgacggc ttcaagctgt cggacgaagt cgagtacaag atcgaagagt tggtcgattc
     1681 cgagctggtc aagatgttgg cgaagagcgc ggacctcggc cgcgcgaggc gcattgacga
     1741 cgggcagggc cggtacgttg agttcgccaa gcgaacgctg ccgcgcaacc tctcgctcga
     1801 agggttacgt gtggtggtgg attgcgccaa tggcgccgcc tacaaggttg caccgcaggc
     1861 cttgtgggag ctgggagccg aggtgatctc gctcggggtc gagcccgacg gcttcaacat
     1921 caaccgcgaa tgcggctcga cagaacccgc cccgctttgc cgcaaggtga aggaaatgcg
     1981 cgccgatatc ggcatcgcgc tggacggcga tggcgatcgc gtgctcatcg tcgacgaacg
     2041 cggacacatc gtcgatggcg accagctgct ggcggtgatt gcggagagct ggaaggcgga
     2101 cggacgcctc gccaagccgg gcattgtggc gacggtcatg tccaatctcg ggctcgagcg
     2161 ttatctcgga accttggaga tttcgctagc gcgcaccccg gtcggcgacc gctacgtgct
     2221 cgaacacatg cgcgctcacg gcttcaatgt cggcggcgag gcgtcgggcc acatcatcct
     2281 ttccgattac accacgaccg gcgatggctt gctcaccgcg ctgcaggttt tggcggtggt
     2341 caagaagctg gagcaaccgg tgtcgagcgt ctgccaccgc ttcgatccgc ttccgcaagt
     2401 gctcaagaac gtacgttacg ggagcggcaa gccgctcgag agcgccaagg tgcgcaacgc
     2461 catcaaggac gcgcaagccc gtctcgacgg gcatggccgg ctgattgtgc ggtcgtccgg
     2521 caccgagccg gtgatccgcg tcatgggcga gggtgacgac aagatgcttg tcgaggaggt
     2581 ggtcgacggc atcgtcgacg ccctgaccag cgctgcctga gcggcggctt cctcgggcca
     2641 gccaagtctc tatccggttg ctgccgcttg caaaacgcgt gcggcctcgg actggcgcgc
     2701 ccgctccccg ccgcatacat tggaatagct acaaaatctg cgttttgttt ttgcctgccg
     2761 ccgcagtctc atgtatcgac agttacataa aggactaaaa accgtcggga acagttcccc
     2821 tccatgatcg tctgttcttg caacgtgctg agcgaccacg acgtgcgcgc ggctcttggc
     2881 cgcgacacgg cgccgcgaaa cgcggggcag gtctatggct gcctcggctg cagcccccag
     2941 tgcggccgtt gcgcgcgcac catccgacgc atcatggacg aggccaccgc ggcggccgcc
     3001 tgcgcccgtt gtccggcggc cggccccgcc gctgaatgag ctttcgctag ccccccggta
     3061 cggggcgcaa tccccttgtc gcgcccgcct ttttataggc attctaaacc agcgatgggc
     3121 aatcgcggcc ggttgagcgc aggggatcta cagcatgcag ggcgacgcaa gggtcatcga
     3181 gtatctcaac cgaggcctgc ggcacgagct tgccgccatt aaccagtact ggctgcatta
     3241 tcggctgttg gacaattggg gctaccgtgc actggccaag aaatggcgcc aggaatcgat
     3301 cgaggaaatg cagcacgcgg acaagatcgt cgtgcggatc atcttcctcg acggctttcc
     3361 caacatgcag gtgctcgatc cccttcgcat cgggcagaac gtgagggagg tgctcgactg
     3421 cgatcttgcg gctgaaatgt cggcccgcgc gctctaccaa gaagccgcga cgcattgcca
     3481 tgccgtccgg gactatgtca cccgcgacct cttcgagaag ctcatgcacg acgaggaaga
     3541 gcacatcgat tatctcgaga cccagctcga cctcgtcgcc aagctcggcc tcgagcttta
     3601 tgctcagtac cacatcggcg agactgacga cgaccacgcg gactgacgga ccgagggtcg
     3661 tgtgcacgct cgcgcgctga gcgaactgcg ccggccattt tcatacacgt gccgagggcc
     3721 gcgatcggcc gccgcttgac ggcgcgcggc ccgttccgta tgtccggccg cgggacaccc
     3781 ctccccaccg aggggcgcct atctggaagg atagatcatg agcaatgcga tgccgaccgt
     3841 gcggccgctc gttccgcact tctcctcggg tccttgcgcc aagcgccccg gctggagcct
     3901 ctccgccctc accgacgcgg ttctcggacg ctcgcaccgc gcgaagatcg gcagagcgaa
     3961 gctcacacgc gcgatcgatc tgacgcgtga agtgctggag gtccccgcca cctaccgcat
     4021 cggcatcgtg ccggcctccg acaccggcgc ggtcgaaatg gcgctgtggt caatgctcgg
     4081 cgcgcgaccg gtcaccgtgc tcgcgtggga atccttcggc gaaggctggg caagcgatat
     4141 cacgaaggag ctcaagctcc cggacgtgac ggtcctcagg gccgcctacg gcgagcttcc
     4201 cggcctcgcc aacgtcgacc cggcctccga cgtgatcttc acctggaacg gcaccacctc
     4261 gggtgtgcgg gtgccgaacg cggattggat cgccgccgat cgggtcggcc tgtcaatttg
     4321 cgacgccacc tccgcttgct ttgcccagca gctcgactgg ccgaagctcg acgtcgtcac
     4381 gttctcctgg cagaaggcgc tcggcggcga agccgcgcac ggcatgctga tcctctcgcc
     4441 gcgcgcggtc gagcggctgg agacttacgc tccgccccgg ccattgccga aaatcttccg
     4501 ccttaccaaa ggcggcaagc tcaaccaggg gatcttcgaa ggcgagacca tcaacacgcc
     4561 ttcgatgctt tgcgtcgagg actatctcga tacgctggcc tgggcgaagt cgatcggcgg
     4621 gcttgaggca ttgatcgcgc gcgccgacgc caatgccaag gtgatcgccg attgggtcgc
     4681 ggcgacgccg tggatcgaat tcctggcccg tgatcctgcg ctgcgctcca acacctcggt
     4741 gtgcctgaag gtcgtcgatc cgtcggtggc aaagcttgcg cccgacgcgc aggcggcttt
     4801 cgtcaagggc atcgccgcca cgttggagaa ggaggcggtc gcctatgaca tcgctgcata
     4861 tcgtgatgcg ccgccgggct tgcgcatatg gtgcggctcg accgtggagc gggccgatgt
     4921 cgaggcgctc acgttatggc tcgactgggc cttcgccaag agcaaggacg cgcggccgca
     4981 ggcggcgtga tgatcgcgaa tcgatagcct ttgcgatcgt gcggttgcgc taatcccgac
     5041 agcgataaag cgaagcagcc atgtccccca acgttctcat ctccgatgcg ctctctcccg
     5101 ccgccgttca aatcttcaag gatcacggga ttggggtcga cttccagccg aagctcggcg
     5161 ccgacaagga gaggcttgcg caggtcatcg gcgacttcga cggcctggcg atccgctcgg
     5221 ccaccaaagt cacacccaag gttttggaga aggcgaatcg gctgaaggtg atcgggcgcg
     5281 ccggcatcgg cgtcgacaat gtcgacatcc cggccgcgac cgcgaagggc atcatcgtga
     5341 tgaacacgcc gttcggcaac tcgatcacca ccgccgagca cgcgatcacg ctgatgctcg
     5401 cactcgcgcg gcagatcccc caggcggacg cctccactca ggccggcaag tgggaaaaga
     5461 accggtttat gggagtggag atcaccaaca agacgctcgg cgtgatcggc tgcggcaatg
     5521 ttggctcgat cgtcgtcaac cgcgcgatcg gactgaagat gaaggtgatc gcctatgatc
     5581 ccttcctctc gcccgagcgc gcgacggagc tcggcgtgga caaggtcgat ctcgccgaac
     5641 tgctcaggcg tgcggatttc gtgaccttgc acacgccgct cacggagaag acgaaaggga
     5701 tcatcgatgg gagggcgatc acggcgatga agaaaggcgt gcgcattgtc aattgcgcgc
     5761 gcggcggact ggtcgatgag gaggcgttgc gcgctgcgct cgattcgggg cacgtggccg
     5821 gcgccgcctt cgacgtcttc accgaggagc cggcgacgga aaacccgctg ttcggccatc
     5881 ccaacgtggt gtgcacgccg catctcggag ccgccaccac cgaggcccag gaaaatgtcg
     5941 cgctgcaaat cgccgagcag atgtcggact acctcctgcg cggcgcgatc tccaatgccg
     6001 tcaatttccc ctcgatcagc gccgaggaag cgccgcggct gcggccgttc atcgagctgg
     6061 cggaaaaact cggctcgttc gccgggcaat tgacggagac cggcatcctc aaggcgcagc
     6121 tgtcctacga aggtggcgtc gccggcatga acaccaaggc gctgacctcg gccgcaattg
     6181 ccggcctgtt gcggcccatg ctgcaggagg tcaacgttgt ctccgcaccg atcgtcgcca
     6241 aggagcgcgg catcgtaatt gaggagatga cgcgcgcggc ggcgagcgac tacggcaacc
     6301 tcatcacggt gacggtggtc accgagcgcc agacgcgctc ggtgtcgggc acggtgttcg
     6361 ccgacgggcg gccgcgcatc gtcaacatca agggcatccg catcgacgcg ggcttcggcc
     6421 gctcaatgat ctacatcacc aatctggaca agccgggctt catcggccgt ttctcatcca
     6481 cgctgggcga tgccgggatc aacattgcga cgtttcatgt cgg
//
LOCUS       DATCWM010000191         3351 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_395783, whole genome shotgun sequence.
ACCESSION   DATCWM010000191 DATCWM010000000
VERSION     DATCWM010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3351)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3351)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3351
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_395783"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..400
                     /locus_tag="VIQ50_03640"
     CDS             <1..400
                     /locus_tag="VIQ50_03640"
                     /inference="COORDINATES: protein motif:HMM:NF015709.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HAD family acid phosphatase"
                     /protein_id="HEY9359500.1"
                     /translation="DGACDRLPSGPCGFRAWILQGVAPVVKPALDLFNTAKAKGVAVF
                     FITGRRDSERQATLWNLDRAGFEGWEKLVTRPDNDAHATVQAFKTEQRRKVADAAYTI
                     IATVGDQQSDLDGGFAECGFKVPNPFYFIP"
     gene            763..1179
                     /locus_tag="VIQ50_03645"
     CDS             763..1179
                     /locus_tag="VIQ50_03645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359501.1"
                     /translation="MNTPKPGGNDIINLSPDHMVDHPAGAHYVLWNGPDLLDVGVPAG
                     GFVRFALANLTPQWTLLMDAQHQQLPVAVRYDGRTLAIWWLPYGGPGARPAARTGGGL
                     SDTDYAAALQKLSATRYKGLMDAAWGIGGWSTYRPR"
     gene            complement(1543..2325)
                     /locus_tag="VIQ50_03650"
     CDS             complement(1543..2325)
                     /locus_tag="VIQ50_03650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008535087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY9359502.1"
                     /translation="MMMNRRMFSAALAAGAAASLTSIKHTTAASTAPVKARNVVLVHG
                     LFADGSCWSEVIARLQAAGLNATAVQNPLTTLPEAVTSAERVLARQDGPTVLVGHSFS
                     GMIVTEAGVHPNVSALVYVAARAPDAGEDYTALAKTYPTPPATAGIVFDGDEGRLSEE
                     AFLRDFAGDLPAEKAKVLYAVQEPFQKALLTGKTTQAAWRSKPSFYAVSTEDRTINPD
                     LERFMAKRMGAKTIEVKASHLSMISRPQVITRLILEAAGQEA"
     gene            complement(2413..>3351)
                     /locus_tag="VIQ50_03655"
     CDS             complement(2413..>3351)
                     /locus_tag="VIQ50_03655"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY9359503.1"
                     /translation="VGAAALAPTATAPASALARAPQAGKLAQPGFYRFKLGTIEITVI
                     SDGTLAFPAETLWGDRAEEARGLLTSTFQPPSPVGLEINTLLVNTGDKLVLIDAGCGV
                     DKFQKTTGRFLGNLAAAGYAPGDIDTILFTHFHFDHLWGISDHENASLLFPSAEFIAA
                     ETEVAFWSAPDLADKLPPQQQPRVTQANLKLATPRLRLIKAVAEVVPGVSTFGTPGHT
                     PGHISVTISSGSKQLLLTGDVVINSAVSFLHPEWPFGFDIDVPLATKSRMAFLDRAAA
                     DKTLVGSYHLPFPGFGHVVREGSGYRWLPADWQWTS"
BASE COUNT          587 a         1008 c         1110 g          646 t
ORIGIN      
        1 cgatggcgcc tgcgaccggc tgccgagcgg cccgtgcgga tttcgtgcct ggatcctgca
       61 aggcgtggcg ccggtggtga agccggcgct cgatctgttc aacacggcaa aggcgaaagg
      121 ggtggcggtg ttcttcatca ccggccgccg cgacagcgaa cgccaggcga cgttgtggaa
      181 tctcgaccgc gccggcttcg aaggctggga gaagctcgtc acccgccccg acaacgacgc
      241 ccacgcgacg gtgcaagcgt tcaagaccga gcagcgccgc aaggtcgcgg acgcggcgta
      301 cacgatcatc gccacggtcg gggatcagca gagcgatctc gacggcggat tcgccgagtg
      361 cggcttcaag gtgcccaatc cgttctattt cattccgtga cgaggcaaga gcggccgact
      421 atctgctgcg ctggcagcca tttatggtcg gcgagttcat ggcacatgtt tcgaagctcc
      481 cggtttgctc tcgcccatga gcgccgtcgt ttcggcgcat gtagttcggt gtgacgtgcc
      541 tcacagaagc cgaatgtgtt cctgggctag tatggccgca tccattcaaa agaagttctg
      601 cgatgaagcg atgtcccacc ccgggggact atggcgtgac ggggatgatt cccaattatc
      661 tcggtgaagc atgaaaacga acttgaaggt gatcctatcg gcaataggtg tcgccgcgtt
      721 gctggtgttt cctgtgacgg cgagtagaaa ggacgcaaag ccatgaacac tcccaaacca
      781 ggcggaaacg atattatcaa tttgagcccc gaccacatgg tcgatcatcc ggcgggcgcg
      841 cattatgtcc tgtggaatgg gcccgacttg cttgacgtcg gcgtgcccgc gggtggtttc
      901 gtccgctttg cgctcgcaaa cctgacaccg caatggacgc tgctcatgga cgcgcaacac
      961 cagcagctgc cggtcgcggt tcgctacgat gggcgcaccc tggcgatctg gtggctgccc
     1021 tatggcggac ctggcgcgcg cccggctgcg cgaaccgggg gcgggttgag cgataccgac
     1081 tatgcggcgg ctctgcagaa gctctcggcg acccgttaca aaggcttgat ggatgccgcg
     1141 tggggtatag gcggctggtc gacgtatcgc ccaagatagc ggattttcgc gcccgagatg
     1201 ttagacgcat caggcccaaa cccagccccg gtcgcccggc ccacagttgc gacggggggc
     1261 tttgcttttc tgccgggatg aaagagcgat tgtctgcttt tggcacgtcg cgtcatttcg
     1321 tggcggcgca gcaattcggt cgctttcgga gcaaagcgga cattgagcca cgctcatcga
     1381 gccggattta tgagtgcacg gcctagaatc tctcgatagt tctgtatccc cctcacccca
     1441 accctctccc caaacgggag tgggagcaga cccgagtttg ccgctcgcgc cgattcttaa
     1501 ttcgtcatgg ccgggcttga ttggtcgccc cgagcttgtg cgtcaggctt cctgtccggc
     1561 ggcttcgagt atcagccgcg tgatgacctg cggacgggag atcatcgata gatgactcgc
     1621 ctttacctcg atggtcttgg cgcccattcg ctttgccatg aaccgctcga ggtcgggatt
     1681 gattgtgcgg tcctcggtcg agaccgcata gaagctcggt ttcgaccgcc aggcggcctg
     1741 cgtggtcttg ccggtgagca gagccttctg gaacggctcc tggaccgcat agagcacctt
     1801 tgccttttcg gcgggcaaat cgcccgcgaa atcccgcagg aatgcctcct cgctaagacg
     1861 tccttcatca ccgtcaaaca cgatgccggc ggtggccggc ggcgtcggat aggtcttggc
     1921 caaggcggtg taatcctcgc ccgcgtccgg cgcccgcgcg gcaacataga caagggcaga
     1981 gacgttcgga tgcacgccag cctccgtgac gatcattccc gagaaggagt gaccgacaag
     2041 gacggtcggg ccatcctgtc gcgccagcac gcgctcggcc gaagtgaccg cctcaggcag
     2101 cgtcgtcaac gggttttgga cggccgtggc attgagcccc gcggcctgca atcgcgcgat
     2161 cacctccgac cagcatgacc cgtcggcgaa gagcccgtgc acgagcacga cgttgcgcgc
     2221 cttgaccgga gcagtgctgg cggcggtggt gtgtttgata gaggtcagcg atgccgcggc
     2281 cccggcagct aaggcggccg aaaacattcg tctattcatc atgatgacta tcctctttcg
     2341 ccgtatggtt ggcatgttgt ttcgatggcg cggatgcagc gaacggtgtg atctcccgtt
     2401 tgactgaagt cgtcagctcg tccactgcca atctgccggc agccagcggt agccgcttcc
     2461 ctcgcgcacc acgtgcccga agccgggaaa gggcagatgg tagctaccga ccagcgtctt
     2521 gtcggccgct gcgcggtcga ggaaggccat gcgcgacttg gttgcgagtg gcacgtctat
     2581 gtcgaacccg aacggccact ccgggtgcag gaagctgacc gccgagttga tcacgacgtc
     2641 gccggtgagg agcagttgtt tgctgccgga actgatagtt accgagatgt ggcctggcgt
     2701 gtgaccgggg gtgccgaatg tgctcacgcc cggcaccacc tccgccacgg ccttgatcag
     2761 acgcagccgg ggggtggcca gtttcagatt cgcctgcgta acccgcggct gctgctgagg
     2821 cggcaatttg tcggccagat cgggggcgct ccagaaggcg acctcggtct cggcggcgat
     2881 gaattcggcc gagggaaaca gcagcgacgc gttctcgtgg tcactgatgc cccacaggtg
     2941 gtcgaagtgg aagtgtgtaa acaggatcgt gtcgatatcg cccggtgcgt agcccgcggc
     3001 ggcgaggttg ccgaggaatc ggccggtcgt tttctggaac ttgtcgacgc cgcagcccgc
     3061 gtcgatcagc accagcttgt cgccggtgtt gacgaggagg gtgttgattt ccagcccgac
     3121 cgggctgggc ggctggaacg tcgatgtgag caggcctctt gcttcctcgg cccgatcgcc
     3181 ccacagcgtt tcggccggga acgccagcgt gccgtcgctg atgacggtga tctcgatggt
     3241 gccgagctta aagcggtaga acccaggctg cgccagcttg cccgcttggg gcgcacgggc
     3301 gagggcagag gcgggggcgg tggcggtagg ggcaagtgcg gcggccccga c
//
LOCUS       DATCWM010000192         9528 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_417443, whole genome shotgun sequence.
ACCESSION   DATCWM010000192 DATCWM010000000
VERSION     DATCWM010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9528
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_417443"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1146
                     /locus_tag="VIQ50_03660"
     CDS             <1..1146
                     /locus_tag="VIQ50_03660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY9359504.1"
                     /translation="GGPAANDPVPVLATAARLADVPVYLDGVGTAKALNTVTVRSQVD
                     GKILEISFKEGQDVPKGYVLAKVDPVTYQAAYDQTVAKKAQDEAQLANARLDLDRYTR
                     LAATNAVNKQQLDTQRALVAQLEAQIKLDQAAVDNARAVLSYTDIIAPIAGRTGIRLV
                     DAGNLVRSAEATGIVILTQLQPISVFFSLPQQNLPELTRGMAEGDLPVDALSSDGKGT
                     LDKGKVMVIDNQVDQTTGTVKLRGEFPNNDLQLWPGQFVNVRVLIDTLRQAVVVPTAA
                     IQRGPNGAFVYVLKQGNTVTVRPVTLTQQDDSRAVVATGLQAGEQVVTTGFARLTEGA
                     QVAVSDAENAGQIAPAGQSRPDGARGKRGSEKGKGSPSAGLPRTANP"
     gene            1143..4349
                     /locus_tag="VIQ50_03665"
     CDS             1143..4349
                     /locus_tag="VIQ50_03665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018457799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY9359505.1"
                     /translation="MSVSSPFIHRPIATSLLGVAVMLGGLLGYMWLPVSSLPQVDFPT
                     IQVTTQLPGGSPDVMASLVTAPLERNFGQIPALQLMTSSSSFGISQITLQFELSRDID
                     AAAQDVQAAINASAATLPRNLPYPPVYSKVNPADAPMVTLAITSDTISLRALSDIADT
                     LLAQRLSEISGVGRVTVQGNIRPAIRIQADLSRLTNYGISLEDLRNVIIAANVAGAKG
                     ALDGAHQSYTIAANDQLAAADAYRNVIVTYRNTAPVLLRDVADVIDGLENSKVGGFYQ
                     GMPAVVVDIQRQPGANVIETVQRIRNELPKLQRSMPIGATLTVVHDATASIRASVRDV
                     QFTLILSVALVITVVLIFLRTIRATIIAGVALPLSIVATFGIMWFCGFSLDNLSLMAL
                     TIGTGFVVDDAIVMIENIVRHMENGEGPFQAALRGASEIGFTVISLTVSLIAVFIPLL
                     FMTGLVGRMFREFALTLTIAVVTSAVVSLTLTPMMCSRLLRHQSEAPASAGIARIFHR
                     SIDATVELYHQSLEWVLRHQRLTLIVTGVTLVATIWLYIIIPKGFLPLQDTGLIFAVM
                     EGGQDISFTEMNRLQATVEEAIRKDRDVTGVVSVIGVTPINATPNAGRLAITLRSRDE
                     RQTPVTAIIERLQRAVAAVPGVIVYFRPVQDIQISTRLSRGQYQYTLTATDPKELADW
                     ATRLVQQLQRSEVLREVVSEAQDYGLALDIQVDREVAGRLGVSMQTVIDTLSDAFGQR
                     QISTIYGQANQYRVILEAKPEYQNDPTSLAKLYVPASGVQAVAQSTSLTSTSPTVIPT
                     VSGAAMVPLTAIGRYQHTTAPLVVAHQEQFPAVTLSFNLAPGAALSDAVAAISQAEHE
                     IGMPSSVTGSYSGDAAEFGKSLAGEPWLILAAAVTIYIVLGVLYESFIHPLTILSTLP
                     SAGVGALLALMLYKQDLSVVALIGIVLLMGIVKKNAIMMIDFALEAERNQGLSPRESI
                     VQASLLRFRPIMMTTLAALFGAIPLAFESGTGSELRNPLGITIIGGLLLSQLLTLYTT
                     PVVYLAMERLKTRLSGPAPRQTELELPDEPEPSQRPAE"
     gene            4354..7497
                     /locus_tag="VIQ50_03670"
     CDS             4354..7497
                     /locus_tag="VIQ50_03670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY9359506.1"
                     /translation="MSGASFSEPFIRRPVGTTLLAIGLFLVGAVAYRFLPVASMPTVD
                     FPTINVTASRPGADPETMAATVAAPLERRLGEIAGVTELTSRSSLGSTRVTIQFDLAR
                     NIDGAARDVQAAINAALTDLPADLPSSPTFRKSNPAATPIMILALTSKNLPPSVLYDA
                     ADSVIAQRLAQIEGVAEVTVNGAEQPAIRVRVDPIALASMGLAFEDVRTAIANTNAVG
                     PIGTFNSAERAVTISANDQIRTAADYDPIVVRSANGTVVRLSSVASIELGVRDNRAAA
                     WFNGQPSVLLVINKQANSNVIETVDRIYALLPEIKRWIPTGIDISVLSDRTQTIRASV
                     EDMQLTLIATIVLVMLVVFVFLRRVAATFAAGVTVPLSLAGTCAMMWLAGFSIDNLSL
                     MALAVSVGFVVDDAIVMIENCFRNLEKGMSPFRAAIEGARQIGFTVLSISISLVAAFI
                     PLLFMTGLVGRVFREFSVTLAFAIAVSTAVSLTVTPMICAHFVRKPPSPNVTWLDRMV
                     ERVLGAMVHFYGRSLGAVLEHRALMLLVMCATLAITVMLYVRTPKGFFPLDDTGLIFG
                     GTQASTEVSFPAMYDLQQKAEAVVRADPAVANVGSSIGTTGWNASVNRGNLFIGLKPL
                     AERGGLNSQAVANRLRQKTADIPGLRVFFFPMQDVRVGGRQTDSTYQFTLWDTNYNEL
                     VTWAPRVLAKIQTLPGLVDVSTDREQGGLQVNVAIDRTAASRLGVRVQDIANVLNDSY
                     AQRQVSTLYTQRNQYRVILEIDPRYQRDPTDLARIYVAGAGNTQVPLTAVTTIGRGLS
                     PLVVNHQGQFPSITISFSLDENTPIERATRLVDQAIAELHIPDSLHAEYAGDARAYRN
                     SIGAQPLLILAALIAVYIVLGVLYESLAHPLTIISTLPSAGLGALLALQIFNTELSLI
                     AFIGIILLIGIVKKNGIMMVDFALEGERKRGLAPERAIYEACLERFRPIMMTTMAALL
                     GAVPLVLATGPGSELRRPLGITIVGGLLISQLLTLYTTPVIYLLLDKLHRRLWGERVH
                     REPGHVLRSAARALRPS"
     gene            complement(7532..8659)
                     /locus_tag="VIQ50_03675"
     CDS             complement(7532..8659)
                     /locus_tag="VIQ50_03675"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY9359507.1"
                     /translation="MAKDAIVSEELAKKFSTEKDTPYLRWVRGEGLDIISAHYVRNLR
                     TVELKPWARRGGAGVYINHEASRTSNDCYVCEVPPGKKLEPQRQLFEEMILVLDGRGS
                     TTVWNDQGRRITFEWKAGAMFAIPLNCWHQHFNGSGQAPARYVAVTNAPPVMNLYEDV
                     EFVFNCKYDFKNRFNGEPDYFSAKGEQKGLLLVTNFVADAVNLPLISAKERGAGGGHI
                     RFNMAKGSMNSHISQFPIGTYKKGHAHGPGAHVIILSGEGYSLMWPEGDAPKQYDWEV
                     GTLIVPPNMWFHQHFNAGTAPARYLAFKHEGVAIRNAQGVPKAWISRRLGGDQIDYAD
                     EIPMVRKIFAEELAKHGLAPRMDQAYAQELADLPPPAAKTG"
     gene            complement(8799..>9528)
                     /locus_tag="VIQ50_03680"
     CDS             complement(8799..>9528)
                     /locus_tag="VIQ50_03680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009762402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9359508.1"
                     /translation="MRVLHAVALEELVDRDATKLSGGQQQRLALARALVMEPQLLLLD
                     EPLSNLDAKLRDRMRSELKRLQRDLSLTTVYVTHDQTEALALSHEIAVMNEGRVVQVG
                     TPRQIYEQPTDQFVADFVGTTNFIGGTVTALGDGRCVVSSAVGELKAHASEGVSKNAT
                     VIVSVRPEDVELSEQPPTAADGDNVCKGTVDAKDFLGDYLDFHVKVGDVVLLAKAHPS
                     LRTPTGDPIYLRMKADKCVAISRQ"
BASE COUNT         1606 a         3238 c         2947 g         1737 t
ORIGIN      
        1 ggcggtcctg cggcgaacga tcctgttccc gttctcgcca ccgccgcgcg actggccgat
       61 gtgccggtct atctcgacgg ggtcggcacc gccaaagcgc tcaacaccgt aacggtgcga
      121 tcgcaggtcg acggcaaaat cctcgaaatc tccttcaagg agggacagga cgtccccaag
      181 ggctacgtgc tggccaaggt cgatcccgtc acttaccaag cggcctacga ccagaccgtc
      241 gccaagaaag cgcaggacga agcccaactc gccaatgcca ggctggactt ggaccgctac
      301 acccgcctgg cggccaccaa tgccgtcaac aagcagcagc tcgataccca aagggccctg
      361 gtcgcgcagc tcgaggcgca gatcaagctc gatcaggcgg cggtcgacaa cgcacgcgcc
      421 gtcctgtcct acactgacat catcgcgccc atcgccggcc gcaccggcat ccgtctggtc
      481 gacgccggca acctggtgcg cagcgcggaa gcgaccggga tcgtgatcct cacgcagctg
      541 cagccgatct cggtgttctt cagcctgccg caacagaatc tgcccgaact caccaggggc
      601 atggccgaag gcgacctgcc ggtcgacgcc ttgagctccg acggcaaggg cacgctcgac
      661 aaaggcaagg tgatggtgat cgacaatcag gtcgatcaga ccaccggcac ggtcaagctg
      721 aggggcgagt tccccaacaa tgaccttcag ctttggcccg gtcaattcgt caacgttcgc
      781 gtcctcatcg acacgctgcg gcaggcggtg gtggtgccga ccgctgcgat ccagcgcggc
      841 cccaacgggg cattcgtcta tgtgctcaag caaggcaaca cggttacggt gcggccggtg
      901 acgctgacgc agcaggacga ttcacgcgcc gtagtcgcca ccggcctgca ggccggcgag
      961 caggtggtca cgaccggttt tgcccgcctc accgagggcg cgcaggtggc ggtatccgat
     1021 gcggagaacg cgggccagat cgcgcccgcc gggcagtcgc gtcccgatgg cgcgcgcggc
     1081 aagcgtggaa gcgagaaagg gaagggtagt ccgagcgcgg gcctgccgcg gaccgccaat
     1141 ccatgagcgt atcttcgccg ttcatccacc gcccgatcgc gacgtcgctg ctcggggtcg
     1201 cggtgatgct cggcggcctg ctcggttata tgtggctgcc ggtttcttcc ctgccgcagg
     1261 tggatttccc aaccattcag gtcaccaccc agctccccgg gggaagcccc gacgtgatgg
     1321 cttcgctggt gacggcgccg ctcgagcgca atttcgggca gattcccgcg ctccagctga
     1381 tgacatcctc gagctcgttc ggcatcagcc agatcacgct gcaattcgag ctcagccgcg
     1441 acatcgatgc ggccgcgcag gatgtccaag cggcgatcaa tgcttcggca gccacgttgc
     1501 cacgaaacct gccgtatccg ccggtctatt ccaaggtcaa tccggccgat gcaccgatgg
     1561 tgacactggc aatcacctcg gacacgattt cgctgcgcgc gctcagcgac atcgccgaca
     1621 cgctgctggc gcagcgcttg agcgaaattt ccggcgtcgg ccgcgtcacc gtgcagggca
     1681 atatccgtcc cgccatccgc atccaggccg atctgtctcg cctcaccaat tacggcatct
     1741 cgctggagga cctgcgcaac gtgatcatcg ccgccaacgt cgccggcgcc aagggcgcgc
     1801 tcgacggcgc gcaccagtcc tacaccatcg cagccaacga ccaactcgcc gcggccgatg
     1861 cctaccgcaa cgtcatcgta acctaccgca acaccgcccc cgtcctgctc cgcgacgtgg
     1921 ccgacgtgat cgacgggctc gagaacagca aggtcggcgg cttctaccag ggcatgccgg
     1981 cggtggtcgt cgacattcag cgccaacccg gcgccaatgt gatcgagacg gttcagcgca
     2041 tcaggaacga gctgccgaaa ctgcaacgct cgatgccgat cggggccacc cttaccgtgg
     2101 tgcacgacgc caccgccagc atccgcgcct cggtccgcga cgtgcaattc accttgatac
     2161 tgagcgtggc gctggtcatc accgtcgtgc tcatcttcct gcgcaccatc cgcgccacca
     2221 tcattgccgg cgtcgcactg ccgctgtcga tcgtcgcgac cttcggcatc atgtggttct
     2281 gcggtttttc actcgataac ttgtcgctca tggcactgac gatcggcacc ggcttcgtcg
     2341 tcgacgacgc cattgtcatg atcgagaaca tcgtgcgcca catggagaac ggggaggggc
     2401 cgtttcaagc cgcactgcgc ggcgcgagcg aaatcggctt cacggtgatc tcgctcacgg
     2461 tctcgctgat cgcggtcttc atcccgctcc tgttcatgac cggcctggtc ggccgcatgt
     2521 tccgggaatt cgcgctcacg ctgaccatcg cggtggtgac ctcggcggtc gtttcgctga
     2581 ccttgacgcc gatgatgtgc agccgactgc tgcgtcacca gtcggaggcg cccgcgagcg
     2641 ccggcatcgc acggatattc caccgctcga tcgacgccac ggtcgagctc tatcaccaga
     2701 gcctcgagtg ggtgctgcgc caccagcggc tgacgctcat cgtcaccggc gtcacgctcg
     2761 tcgccacgat ctggctctac atcatcattc ccaaaggatt tctgccgctc caagacactg
     2821 ggctgatttt tgcggtcatg gaaggcggac aggacatctc gttcaccgag atgaatcgcc
     2881 tgcaggcgac ggtcgaggag gccatccgca aggatcgcga cgtgaccggc gtcgtctccg
     2941 tcatcggggt gaccccgatc aacgccacgc cgaacgccgg acggctcgct atcacgctgc
     3001 gctcgcgcga cgaacggcag acgcccgtga ccgcgatcat cgaacggctg cagcgcgcgg
     3061 tcgcagctgt acccggcgtc atcgtctatt ttcgcccggt gcaggacatc cagatctcga
     3121 cccgcctgag ccgcgggcaa taccagtaca cgctcaccgc gaccgatccc aaggagctcg
     3181 ccgactgggc cacgcgcttg gtgcagcaac tgcagcgctc cgaggtgctg cgcgaggtcg
     3241 tctcggaagc gcaggactac ggccttgcct tggatattca ggtcgatcgc gaagtggccg
     3301 ggcggctcgg cgtgtccatg caaaccgtga tcgacacctt gagcgacgct ttcggccagc
     3361 ggcaaatctc gaccatctac ggtcaagcca accagtaccg cgtgatcctc gaggcgaaac
     3421 cggaatacca gaacgatccg acctcgctcg cgaagctcta cgtccctgcc tccggcgttc
     3481 aggcggtggc ccagtccacc tcgttgacct cgacctctcc cacggtcatc ccgacggtct
     3541 ccggcgccgc catggtgccg ttgaccgcaa tcggtcgcta ccagcacacc accgcccctt
     3601 tggtggtcgc gcatcaggag cagttcccgg cggtgacgct tagcttcaac ctcgcccccg
     3661 gggcggcgct cagcgacgcg gtcgcggcga tttcgcaggc cgagcacgaa atcggcatgc
     3721 cgagttcggt gaccggcagc tattccggcg acgccgccga attcgggaag tcgcttgccg
     3781 gggagccctg gctgatcctg gcggccgcgg tcacgatcta catcgtgctc ggcgtgctct
     3841 acgaaagctt catacatccg ctcaccatct tgtcgacttt gccgtcggcc ggcgtcggcg
     3901 cgttgctcgc gctgatgctc tacaagcagg acctctcggt ggtcgccctc atcggcatcg
     3961 tcttgcttat gggcatcgtg aagaagaacg cgatcatgat gatcgacttc gcgctcgaag
     4021 ccgagcgcaa tcagggactc tcgccgcgcg aatcgatcgt gcaggcatcg ctgttgcggt
     4081 tccgtccgat catgatgacg acgctcgcgg cgctgttcgg cgcgattccg ctcgcgttcg
     4141 aatcggggac cggctcggag ctgcgcaacc cgctcggcat aaccatcatc ggcggactgc
     4201 tgctgagcca gttgttgacg ctctatacca ccccggtcgt ctatctcgcg atggagcgcc
     4261 tgaagacgcg gttgagcggc ccagcgccgc ggcagaccga gctcgagctg ccggacgagc
     4321 ccgagccgtc gcagcgcccg gcggagtgac ggcatgagcg gcgcgagttt ctccgaaccc
     4381 ttcatccgcc ggccggtcgg caccacgctg ctcgcgatcg gcctatttct ggtgggcgcg
     4441 gtggcctacc gtttcctgcc ggtcgccagc atgccgaccg tggattttcc caccatcaac
     4501 gtcaccgcca gtcggccggg cgccgatccc gagaccatgg cggcgacggt tgccgcgccg
     4561 ctcgagcgcc ggctcggcga aatcgccggc gtcaccgaac tcacctcgcg cagctcgttg
     4621 ggcagcacgc gcgtcaccat ccagttcgat ctcgcccgca acatcgatgg cgccgcgcgc
     4681 gacgtccagg cagcgatcaa cgccgcgctc acggacctgc cggccgacct gccatcatcg
     4741 ccgactttcc gcaaatccaa tccggcggcg acgccgatca tgattctggc gctcacctcc
     4801 aagaaccttc cgccgagcgt gctctatgat gccgccgaca gcgtgatcgc acagcggctc
     4861 gcgcagatcg aaggggtcgc cgaggtcacc gtcaatggcg ccgagcagcc cgccattcgc
     4921 gttcgggtcg atccgatcgc gctcgcttcg atgggcttgg ccttcgagga cgtgcgcact
     4981 gccatcgcca acaccaacgc ggtcgggccg atcggcacct tcaacagcgc ggagcgcgcg
     5041 gtcaccatct ctgccaacga tcagattcgg accgcggcgg actacgaccc gatcgtggta
     5101 cgctccgcca acggcacggt cgtccgactt tcctcggtcg cttcgatcga gctcggggtg
     5161 cgcgacaatc gggcagccgc ctggttcaat ggccagccgt cggtgctgct tgtgatcaac
     5221 aagcaggcca attccaacgt gatcgagacc gtcgaccgca tctatgcgct gcttcccgag
     5281 atcaagcggt ggatccccac cggcatcgac atttcggtgc tgtccgatcg cacccagacg
     5341 atccgcgcca gcgtagagga catgcagctc accctgatcg cgaccatcgt tttggtcatg
     5401 ctggtcgtgt tcgtgttctt gcgccgcgtg gcagcgacct tcgccgccgg tgtgaccgtt
     5461 ccgctgtcgc tcgccggcac gtgtgcgatg atgtggctcg ccggcttctc gatcgacaat
     5521 ctatcgctga tggcgctggc ggtctcggtc gggttcgtgg tcgacgacgc tatcgtcatg
     5581 atcgagaact gcttccgcaa tctcgaaaag ggcatgtcgc cgttccgcgc ggccatcgag
     5641 ggcgcgcggc aaatcggatt caccgtgctc tcgatcagca tatcgctggt cgccgcgttc
     5701 atcccgctgt tgttcatgac cgggctggtc ggccgcgtgt tccgggaatt ttcggtcacg
     5761 ctggccttcg ccatcgccgt ctcgactgcg gtctcgctga cggtgacgcc aatgatctgc
     5821 gcgcatttcg tgcgcaagcc gccgagtccc aacgtcacct ggctcgatcg gatggttgag
     5881 cgcgtattgg gcgcaatggt gcacttctat gggcggagcc tcggcgccgt gcttgagcac
     5941 cgcgcgctca tgctcctcgt catgtgcgca acgttggcga tcacggtcat gctctacgtg
     6001 cgcacgccga agggcttttt tccgctcgac gataccggcc tgatcttcgg cgggacgcag
     6061 gcgtcgaccg aggtgtcgtt cccggcgatg tacgacctgc agcagaaggc ggaagcggtc
     6121 gtgcgggcag atcccgccgt cgccaacgtc ggctcgtcca tcggcaccac gggctggaat
     6181 gcctcggtca accgcggcaa cctgttcatc ggcctcaagc cgctggccga acgcggagga
     6241 ctcaactcgc aagcggtggc caaccggctg cgacagaaaa ctgccgacat cccggggctg
     6301 cgcgtgttct tcttcccgat gcaggacgtg cgggtcggcg gtcgccagac cgattccacc
     6361 tatcaattca cgctgtggga taccaactat aacgagctcg tgacctgggc gccccgcgtc
     6421 ctggcgaaga tccagacgct acccggactg gtcgatgtct cgaccgatcg cgagcaaggc
     6481 ggcttgcagg tcaacgtggc gatcgaccga accgcagcct cacggctcgg cgtgcgtgtg
     6541 caggacatcg ccaatgtgct caacgattct tacgctcagc gccaggtgtc gacgctctat
     6601 acccagcgca accagtatcg cgttattctc gaaatcgatc cgcgctacca acgcgacccc
     6661 accgatctgg cccgcatcta cgtcgccggc gccggcaaca cccaggttcc cctcaccgcc
     6721 gtgacgacga tcgggcgcgg gctgtccccg ctcgtggtca accaccaggg gcagtttccc
     6781 tccatcacca tcagcttcag cctcgatgag aacacaccga tcgagcgggc gacgcggctt
     6841 gtcgatcagg cgatcgccga gctgcacatt cccgactcgc tccacgcaga atacgccggc
     6901 gatgcgcgcg cctaccgcaa ctccatcggc gcgcagccgt tattgattct ggcggcgctc
     6961 atcgccgtct acatcgtgct cggcgtgctg tacgagagcc tggcgcatcc gctgacgatc
     7021 atctccaccc taccctcggc aggactcggc gccctcttgg ccctgcagat tttcaacacc
     7081 gagctgtcgc tgatcgcctt catcggcatc attctgttga tcggcatcgt caagaagaac
     7141 ggaatcatga tggtcgactt cgcgcttgaa ggcgagcgca agcgcggcct ggcgccggaa
     7201 cgggcgatct acgaggcctg tctcgagcgc ttccggccga tcatgatgac gaccatggcg
     7261 gcgctgctcg gggcggtgcc gctggtgctc gcaaccggcc cggggtcgga actgcgccgg
     7321 ccgctcggca tcaccatcgt gggtgggctt ctcatctcgc agctgctcac cctctacacc
     7381 acgccggtga tctacctcct cctcgacaag ctgcaccggc ggctgtgggg cgagcgcgtg
     7441 catcgcgagc ccgggcatgt cttgcgctcc gccgcgcggg cgctgcggcc gtcgtgaccc
     7501 gcggcatgca ttagtcgcgc gcgcgacgcg cctaccccgt cttcgccgcc ggcggcggca
     7561 ggtcggcgag ttcctgcgca taggcctgat ccatgcgcgg ggcgagaccg tgcttggcaa
     7621 gctcctcggc gaatattttg cgcaccatcg ggatctcgtc ggcgtagtcg atctggtcgc
     7681 cgccgagacg ccggctgatc caggccttgg gcacgccctg tgcgttgcgg atggcgacgc
     7741 cctcgtgctt gaaggcgagg taccgcgccg gggcggtgcc ggcgttgaag tgctggtgga
     7801 accacatgtt cggcggcacg atcagcgtgc cgacctccca atcgtactgc ttcggcgcgt
     7861 cgccctcggg ccacatcagc gagtagccct cgcccgatag gatgatcacg tgcgcgcccg
     7921 gaccgtgcgc gtggcccttc ttgtaggtac cgatcggaaa ctgggagatg tggctgttca
     7981 tcgagccctt agccatgttg aagcggatgt ggccgccgcc ggcaccgcgc tccttcgcgc
     8041 tgatcagcgg caggttgact gcgtccgcga cgaaattggt gacgaggagg aggcccttct
     8101 gctcgccctt ggcactgaaa tagtcgggct cgccgttgaa gcggttcttg aagtcgtact
     8161 tgcaattgaa gacgaattcc acgtcctcgt agagattcat caccggcggt gcattggtca
     8221 cggcgacgta gcgcgccggc gcctgcccgg agccgttgaa gtgctggtgc cagcaattga
     8281 gtgggatggc gaacatcgcg cccgccttcc attcgaaggt gatgcgtcgg ccctggtcgt
     8341 tccacacggt ggtggagccg cggccgtcga ggaccagaat catttcctcg aacaattggc
     8401 gctgcggctc gagcttcttg ccgggcggga cctcgcagac atagcagtcg ttggaggtgc
     8461 gcgaggcctc gtgattgatg tacacgccgg cgcctccgcg ccgcgcccac ggcttgagct
     8521 cgacggtgcg caggttgcgc acgtaatgcg cgctgatgat gtcgagacct tcgccgcgca
     8581 cccagcgcag gtaaggcgtg tctttttcgg tggagaattt tttcgccagc tcctccgaga
     8641 cgatggcgtc cttagccatg ccttgctcct tgcagaaacc gctcatcggt ggtcagtgat
     8701 gagcaagcgg gcgtcaccaa tggggaagcg gacatgacag ctcgcatggc tgcttgggct
     8761 tgacgcttct gttgctgatt ctgacgaccg atttgcgatc actgacgact gatagcgacg
     8821 catttgtccg ccttcatgcg cagatagatc ggatccccgg tcggcgtgcg caacgaagga
     8881 tgcgccttgg ccaacagcac aacatcgccg accttgacat gaaaatccag atagtcgccg
     8941 agaaaatcct tggcgtcgac ggtgcccttg cagacgttgt cgccatcggc ggcggtcggc
     9001 ggctgttcgg acaattctac gtcctcgggc cgtaccgata cgatcaccgt ggcgttcttg
     9061 ctcacaccct cgctcgcgtg cgccttgagc tcgcccacgg ccgagctgac gacgcagcgg
     9121 ccatccccga gcgcggtgac ggtgccgccg atgaaattgg tggtgccgac gaaatccgcg
     9181 acgaactgat ccgtcggctg ctcgtagatc tggcgcggcg tgccgacctg gacgacgcgg
     9241 ccttcattca tcaccgcgat ctcgtgcgaa agcgcaagcg cctcggtctg gtcgtgcgtg
     9301 acgtagacgg tcgtgagact gaggtcgcgc tgcagccgct tgagctcgga gcgcatgcgg
     9361 tcgcgcagct tggcgtcgag gttggagagc ggctcgtcga gcaacaagag ctgcggctcc
     9421 atcaccaggg ctcgcgcgag cgccaggcgc tgctgctggc cgcccgagag cttggtggca
     9481 tcgcggtcca ccaactcctc gagcgcgacc gcatggagaa cgcgcatg
//
LOCUS       DATCWM010000193         4640 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_152848, whole genome shotgun sequence.
ACCESSION   DATCWM010000193 DATCWM010000000
VERSION     DATCWM010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4640)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4640)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4640
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152848"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..252
                     /locus_tag="VIQ50_03685"
     CDS             <1..252
                     /locus_tag="VIQ50_03685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012605946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEY9359509.1"
                     /translation="SKTCSAHGLRKAACRRLAEAGCSANEIASISGHASLREVERYTR
                     AADQARMARQAIARTEQQHQVSNRPKKTVKPALKTLKQL"
     gene            complement(353..691)
                     /locus_tag="VIQ50_03690"
     CDS             complement(353..691)
                     /locus_tag="VIQ50_03690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007536871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005267 - potassium channel activity
                     [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium channel family protein"
                     /protein_id="HEY9359510.1"
                     /translation="MNRPASKTVQRRFFLAVARAIHVAWPVLSIILVFQVALGLLIGF
                     VEGWPVGDALYFTFVTGLTIGYGDLVPRQALARALAIGVGALGVFLTGLIAGIAVYAL
                     RTALIEGDRG"
     gene            complement(724..1740)
                     /locus_tag="VIQ50_03695"
     CDS             complement(724..1740)
                     /locus_tag="VIQ50_03695"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S1C family serine protease"
                     /protein_id="HEY9359511.1"
                     /translation="MRMGSRDSCAVVPSAALIASLLALLSASAAEAQPASVEELVSAV
                     VRINTHITPDGRTVQGLGREREGSGILIDADGLILTIGYLMVEAYAAEVVDNSGRTVP
                     ANVVGYDHETGFGLLRTIEPLKLKPMPLGKSAEIREGDPVLIASFGGPAMVGGAYVVA
                     KREFAGSWEYLLDEALFTAPPHPAWSGAALINREGKLVGVGSLIVGDATRGSDKAPGN
                     MFVPIDRLSPIFGDLIAAGRTAGPGRPWLGLNTEELRGRLFVSRVTPGAPAEKAGIKS
                     GDVIVGVNGEQPKSLADFYRKVWAQGTAGATVALDVLQDSQVRRFEVQSINRLDHLRL
                     KSTF"
     gene            complement(1765..2145)
                     /locus_tag="VIQ50_03700"
     CDS             complement(1765..2145)
                     /locus_tag="VIQ50_03700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359512.1"
                     /translation="MRTVIVLVSAILPSVSLADSVRHLSVPERFWGTWGPEADLCRND
                     KAIFVVSAKGYVTSQANCTVQWVTETAGAGGSVFSAHMRCSNPGAPDEITEVNRVIVP
                     NDRGELSAGPDFSQLKSYRRCPAN"
     gene            2364..2609
                     /locus_tag="VIQ50_03705"
     CDS             2364..2609
                     /locus_tag="VIQ50_03705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359513.1"
                     /translation="MVGFREQEVFMPQVDPWEKAADCERALRITIDPIHRETLSNIRE
                     FWIALAQESRFLSEDALAAQIETIGRLHAKLDRDMHA"
     gene            complement(2665..2976)
                     /locus_tag="VIQ50_03710"
     CDS             complement(2665..2976)
                     /locus_tag="VIQ50_03710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359514.1"
                     /translation="MRVAVPLIAAFIIVAEANMSLAQPANPSPGAGAACPPDIKGDPP
                     TVGGGSSEPLSDKLAQSKGVICPPAGVDREMQVTPPSGGHLKVIPAPGTPGGDPNVQP
                     K"
     gene            3210..4457
                     /locus_tag="VIQ50_03715"
     CDS             3210..4457
                     /locus_tag="VIQ50_03715"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY9359515.1"
                     /translation="MTSTSDTEVVIIGGGAAGIAAARRIVDAQLGCLLLEARSRLGGR
                     AWTSTEHSAFPIDLGCGWLHSADRNPWRDAAEAQRRSIDKTPPPWMRPSAPIGFPLSE
                     QLAFLKAQQEFHHRLDSLSEEQPDVASASFLEPREQWNALINAVSTYVSGAELDRVSA
                     RDFGRYADSGVNWRVVEGYGTVIATHGHGLPVILGCPVRLIDHRGRRLKVETTNGPIV
                     ADAAIVTIPSTILAEETMRFIPPLAKKTEAAAGLPLGLADKLFLSLAQPEEFDKDSRL
                     FGRVDRSETGVYHVRPFGRPQIEGYFGGRLAADLEAGGVAAFADFAIRELVGLLGTHF
                     ANRVRPVKLHPWGVDPFSRGSYSYALPGKADCRTELAATVDDRLFFAGEACSQNDFST
                     AHGAYLTGIAAAERLIAARGRKR"
BASE COUNT          899 a         1482 c         1463 g          796 t
ORIGIN      
        1 tccaagacgt gctcggccca cgggctgcgg aaggcggcat gtcgccggct ggcagaagcc
       61 ggctgcagcg ccaacgagat tgccagcatt agcggacatg ccagcctaag agaggtagag
      121 cgctacactc gcgcggccga tcaggcacgc atggcgcgac aggccattgc gaggacagag
      181 cagcaacatc aagtgtcaaa ccggcctaag aaaactgtca aaccagcgct caagaccttg
      241 aaacaattat gattgccaat gcacggcaca aaaggggctg ctttatgccg ggctttagca
      301 aattagcctg tgtggcaaag gccgcggtcg agggaccgct tcccgaggcg ggtcagccgc
      361 ggtcgccctc gatgagcgcc gtgcgcaagg catagaccgc aattcccgct atgagcccgg
      421 tgaggaagac tccgagggcg ccaaccccaa tcgccagtgc gcgcgcgagt gcctgccgcg
      481 gcacaagatc gccataaccg atcgtgaggc cggtgacgaa ggtgaaatac agcgcgtcac
      541 cgacaggcca gccctcgaca aacccgatca gcaggcccag ggcaacttga aaaaccaaaa
      601 tgatcgagag aaccggccag gcgacgtgaa tggcgcgggc aaccgccagg aagaagcgcc
      661 gttgcacggt cttggatgcc ggccggttca tgtccgcttt caagtctttc ggccaacagc
      721 ctgtcagaac gtcgatttca gccttagatg atcgagacga ttgatcgact ggacttcgaa
      781 gcgccgcact tggctgtcct gcagcacatc gagcgccaca gtggcgcccg cggtgccttg
      841 ggcccagact ttgcgataaa aatcggccaa gcttttcggc tgctcgccat tgacgccgac
      901 gattacatcg ccgcttttga tgccggcctt ctctgccgga gcgccaggcg tgacccggct
      961 cacgaacagc cgcccccgca gctcctcagt gttgagacca agccatgggc gcccgggacc
     1021 cgccgtccgc ccggccgcaa tcagatcgcc gaagatgggc gagaggcggt cgatcggcac
     1081 gaacatgttg cccggcgctt tatcgctgcc gcgggtcgca tcgccgacga tgagcgaacc
     1141 cacgccgacg agcttgcctt cgcggttgat cagcgccgcg ccgctccagg ccggatgcgg
     1201 cggcgcggtg aagagcgcct catcgagcag atattcccag ctgccggcga attcgcgctt
     1261 ggccacgaca taggcgccgc ccaccatggc aggaccgccg aagcttgcga tcagcacggg
     1321 atcgccttcc ctgatctcgg cggacttgcc caacggcatc ggcttgagct tgagcggctc
     1381 gatggtgcgc aacaggccga aaccggtctc gtggtcgtag cccacgacgt tcgccggcac
     1441 ggtacgtccg ctgttgtcga cgacttcggc cgcgtaggct tcgaccatca gatagccgat
     1501 cgtcaggata agtccgtcgg catcgatgag gataccggac ccctcgcgtt cgcggcccag
     1561 accttgcacg gtgcgtccgt ccggcgtgat gtgcgtgttg atccgcacca ccgcggaaac
     1621 gagctcttcg acggaagccg gctgcgcctc cgcggcggac gcgctcagta gcgcgaggag
     1681 gcttgcgatg agcgccgcag agggcacgac ggcgcagctg tcgcgagaac ccatacgcat
     1741 gaatgctcct ggtcggttcg aacgctagtt cgctggacag cgtcggtagc tcttgagctg
     1801 gctgaaatca ggacccgcgg aaagctctcc gcggtcattc ggcacgataa ctcgattcac
     1861 ctcggtgatc tcatccggcg cacctggatt agagcagcgc atatgggcgg agaagaccga
     1921 cccgccggcg cctgccgttt cggtgaccca ttggaccgtg cagttcgctt gcgaggtcac
     1981 atatcctttt gccgatacga caaagattgc cttgtcattg cggcagagat ccgcctccgg
     2041 cccccaagtc ccccaaaatc gttccggcac actcaggtgt cgcacgctgt ccgcaagcga
     2101 cacgctcggc agaatcgcgg agacgagaac gatgacggta cgcatgatgt cgcccccggt
     2161 aaaaccacac tcaactttag cgccgagtgc atcgctcttt ccagcccgcg atcgcatggc
     2221 tgggacactc gtcaggacag gggaaattca ccgcggctaa gcggcctggt cggcggacga
     2281 agcagggcac cgcctgtggg gatagtgagc tacggggaaa acctatgtcc gcggctcgaa
     2341 agcccacgcg aagttttgta aagatggtgg gttttcgcga gcaggaggtt tttatgcctc
     2401 aagtagaccc ctgggaaaag gcggcggact gcgagcgggc gcttcggatc accatcgatc
     2461 caatccaccg cgaaaccctc agcaatatcc gagaattctg gattgcgctg gcgcaagaga
     2521 gccggttttt gagcgaggat gccttggcag cacagatcga aacgatcggc cgcctgcatg
     2581 ccaagctcga ccgcgacatg cacgcctagc gcctgcggca gcggcgaaga aggcagccgt
     2641 cgcagcacca cggggcggga aagctcattt cggctgcacg tttgggtccc cgcctggcgt
     2701 gcccggcgcc ggaatgactt tcaggtgacc gccgctcggc ggcgtaacct gcatctcccg
     2761 gtcaacgccc gcgggcggac atatgacccc cttcgactgc gcgagcttgt cgctcaacgg
     2821 ctcggaactg ccgccgccga ccgtgggcgg atcgcctttg atatccggcg ggcatgccgc
     2881 tcccgcgcca ggagacgggt tggccggttg cgccagcgac atattggcct cggcaacgat
     2941 gatgaacgcg gcgatgagcg ggactgcaac gcgcacagtc tggtcctccc gtttgcacac
     3001 ccgttttgtc aacgtggaaa ggcccccgga cgttcccgcc cgatgtcgcg caacgaggca
     3061 acgctcgcgg cggggcagca aggccccccg ctccatgcgg gaacggggcg agagcatttg
     3121 caattgagac cgaacaagcg gacatgttgc ggtcgcaatg tcctacttga gcaaacgccc
     3181 tccttcattc cgagcgccgc ggaaagagcg tgaccagcac cagcgatact gaagtggtaa
     3241 tcatcggcgg cggcgcggcc ggtattgccg cggcgcggcg gatcgtggac gcgcagctcg
     3301 gttgtctcct gctcgaggcg cggtcgcggc ttggcggacg ggcctggacg tccaccgagc
     3361 actcggcatt tcccatcgat ctcgggtgcg gttggctgca ctccgccgac cgcaatccgt
     3421 ggcgagatgc ggctgaggcg caacgccgct cgatcgacaa aacaccgccg ccgtggatgc
     3481 gaccgtcggc tccaatcggt ttcccgcttt ctgagcagct cgcttttctc aaggcgcaac
     3541 aagaatttca tcaccggctc gactcgctct cggaagagca gcccgacgtt gcatccgcaa
     3601 gcttcctcga accgcgcgag cagtggaacg cgctgatcaa cgcggtgagc acgtatgtca
     3661 gcggagcgga gctcgatcgc gtatcggcgc gggacttcgg ccgctacgcc gacagcggag
     3721 tcaattggcg agttgtggag ggctatggga cggtgatcgc cacccacggc catggattgc
     3781 cggtgatact cggctgccca gttcgcctca tcgatcaccg aggacggcga ttgaaggtgg
     3841 aaaccaccaa tggccccatc gtcgcggacg ccgccatcgt caccatcccg agcacgatcc
     3901 tcgccgaaga gacaatgcga ttcatcccgc ccttggcaaa gaaaaccgag gcggcggcgg
     3961 ggctgccgtt ggggcttgcc gacaaattgt ttctatcgct cgcacagccc gaggagttcg
     4021 ataaggacag ccgccttttt ggacgcgtcg accgcagcga gaccggggtc tatcacgtgc
     4081 ggccattcgg gaggccgcag atcgagggtt atttcggcgg gcgcttggcg gcagacctcg
     4141 aagctggcgg ggtggcggca ttcgcggatt ttgccattcg cgaactggtc ggcttgctcg
     4201 gcactcattt tgccaaccgc gtgaggccgg tcaagctgca tccttggggc gtcgatccgt
     4261 tttctcgcgg ctcgtattcc tatgccttgc ccggcaaggc ggactgccgc actgagctcg
     4321 ccgcgacggt ggacgatcgc cttttcttcg ccggcgaggc atgctcgcag aacgatttct
     4381 caaccgcgca tggcgcatat ctgaccggga ttgccgctgc cgagcggctc atcgccgcgc
     4441 gaggcaggaa acgataggct agcccgcgcg tccgtccttg atccgtaagc gggtgacgca
     4501 aatcacgtca ccatgagacg cctcaccacc ggtatcgcgc gggaggaact atcatgaacg
     4561 agccttcatt gcgctcggct cgacccatca ggaaatcgtc gcgtccggcc cgcaaacggc
     4621 ggtcatcgtc gcggccgtac
//
LOCUS       DATCWM010000194         4607 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_325607, whole genome shotgun sequence.
ACCESSION   DATCWM010000194 DATCWM010000000
VERSION     DATCWM010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4607
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_325607"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..184
                     /locus_tag="VIQ50_03720"
     CDS             <1..184
                     /locus_tag="VIQ50_03720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003525450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9359516.1"
                     /translation="IRASGVTILLVEHDMPMVMRVSDRIVVLNYGRIIAEGPPAVIQR
                     NPDVIRAYLGEGRKRA"
     gene            177..881
                     /locus_tag="VIQ50_03725"
     CDS             177..881
                     /locus_tag="VIQ50_03725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018263879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9359517.1"
                     /translation="MLELRDVVCRYGQVTALKGVSLTVGKGQLVALIGANGAGKTTTL
                     KAISGLLHPSAGTIVFDGHDITHASARTILSLGLAHCPEGRHVFPQMTVLENLEMGCY
                     LRTDRREIAADMARVFDQFPRLAERRQQPAGTLSGGEQQMLAIGRALMSRPKLILFDE
                     PSLGLAPTIVERTFDIVSGIRASGTTVLMVEQNASAALNMCDHAYLLESGALALEGSG
                     RELIDNPHVRTAYLAG"
     gene            954..2366
                     /locus_tag="VIQ50_03730"
     CDS             954..2366
                     /locus_tag="VIQ50_03730"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9359518.1"
                     /translation="MARTLVKNGYVVTVDPGRSVFPGGFVAIDGAKISAVGPRERTPA
                     AGGFDEIIDASGAVVLPGLINMHQHHWYTLFKGLCDGYLLEDWVGEFLLPLTTQLDAE
                     AMQVSSYIAGMEMLATGTTCSLNHSVTTTSPAIVRATIEPQQELGIRQVFAKELRCKT
                     PGNPRHALSLDEALADWAEEHRRWDGKHDGRVRMAMVIESNAHWVAAGMSTEELICRG
                     YELAKNLNARISTHIAGGTFSLEKGFLKYLRETGRTDVRYLMQLGILDPHWVLIHGIH
                     CTELDIEHMARVGCGFVYTPTSESMRGGGIGPAANALRAGVNVALGTDGPMVDYSVDM
                     VEQMKSCTLMQHVRHLDPTRMPAEATIEMATINAAKALGLDGEIGSIEPGKRADIAVF
                     DVDKPYVGVLHRPISSFICAGKGSDVRCVFVDGDLVYRAGQFTRFPDGERVLREGERI
                     ARRALDKTGLRHRAEQHWRV"
     gene            2387..3202
                     /locus_tag="VIQ50_03735"
     CDS             2387..3202
                     /locus_tag="VIQ50_03735"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013945912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9359519.1"
                     /translation="MDILVEDVSRIWPGRKGTSVTALQDFSYHFRSGRFTCLLGPSGC
                     GKSTLIQIMGGIEDATSGSVRVVDPALSSRARPLGRDSVMVWQTLNLFPWRNVLDNVA
                     FGLEMQGMPRAQRYAKARALLASVGLRGFETHLPGQLSGGMRQRVALARALIMARPIM
                     LMDEPFGALDAQTKIVMQEELLRIFDETRKTIVFVTHAIEEAILLGDEVIVMTARPGR
                     IKEVINVDLPRPRSLELVSTKEFGMLFDRAFHLIREEVMKSLEQQAAMLEEAQ"
     gene            3199..3990
                     /locus_tag="VIQ50_03740"
     CDS             3199..3990
                     /locus_tag="VIQ50_03740"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9359520.1"
                     /translation="MKLSARGRRILELTLPALTVVAFVAGWEALVDLRGIPPIYLPAP
                     SAIAEYLLRMIADGSMGFNLGVTLLRIFAGFAVAAVAGVMVGIVMGMSRIAARVADPW
                     IAALYPLPKISLIPLLIIWLGTGETYKIVISAVSAFFPIVISAYSGIRQADQGLIKAA
                     KDLGANRRQVQMKVVIPAAIPSIFAGLHLGMGVTIILVVAAEMIGGSGESGMGYLLIH
                     AGQVMETEKVFASLVVLAVMGALVIKAQQWIDRRVAPWTALHDGH"
     gene            4009..>4607
                     /locus_tag="VIQ50_03745"
     CDS             4009..>4607
                     /locus_tag="VIQ50_03745"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359521.1"
                     /translation="MLTRRIFSTLVLTLAAAAALPAAPGRCADLVRVGEGPFITGGGF
                     LVAREKGYFKRLGIDIDTKMFIDGALAVPALISGELDITFMTANAGLFNSIAKGAPLV
                     LFLDRGNNKVGRAYTAMNVTQELYDQGVHGLADFAKLKGKKIGLSALGSINQYTSALA
                     LQRAGLDPRKDVQWITNVPQPDLMKMLGTKQVDATDLAY"
BASE COUNT          832 a         1457 c         1465 g          853 t
ORIGIN      
        1 cattcgcgcg tcgggcgtca cgatcctctt ggtcgagcac gacatgccga tggtcatgcg
       61 ggtgtcggac cggattgtcg tcctcaacta cggccgcatc atcgccgaag gtcccccggc
      121 cgtgatccag agaaatcccg atgtcattcg cgcctatctg ggggaaggaa gaaaacgtgc
      181 ttgagctgcg cgatgttgtt tgccgctacg gccaggtgac ggcgctcaag ggagtgtcgc
      241 tcaccgtcgg caaaggccag ctggtcgcgc tgatcggcgc gaacggcgcc ggcaagacga
      301 cgacgctcaa ggcgatctcg gggctgttgc acccgagcgc cgggacgatc gtgttcgatg
      361 gacacgacat cacccatgcc tccgcgcgca ccatcctctc gctcgggctg gcgcattgcc
      421 cggagggtcg gcacgtcttt ccgcaaatga cggtgctgga gaatctggag atgggctgtt
      481 atctgcgcac cgatcgccgc gagatcgccg ccgacatggc gcgggtgttc gatcaatttc
      541 cgcgtctcgc cgagcgccgg cagcagccgg cgggcacgtt gtccggcggc gagcagcaga
      601 tgctcgcaat cggccgcgcg ctgatgtcgc ggcccaagct catcttgttc gacgagcctt
      661 cgctcgggct cgcccccacc atcgtcgagc gcacgttcga catcgtcagc ggcattcgcg
      721 cttccggcac cacggtgctg atggtggagc agaatgcctc cgccgcgcta aacatgtgcg
      781 accacgccta tctcctggaa tccggcgcgc tggcgctgga aggaagcggc cgcgagttga
      841 tcgacaaccc acacgtgcgc accgcctacc tcgcgggatg acattttgag tcaggcacga
      901 aacgaagata tataaggtcg aggttttctc ctcccgcttc ccggaagcat gaaatggcgc
      961 gaacgctcgt caagaatggc tacgtcgtga ccgtcgatcc gggacgctcg gtgttccccg
     1021 gcggttttgt cgccatcgac ggcgccaaga tctccgccgt cggcccacgc gagcgcacgc
     1081 ccgcggccgg cggcttcgat gagatcatcg atgcctccgg tgcagtcgtg ctgcccggcc
     1141 tcatcaatat gcaccagcat cactggtaca cgctcttcaa gggcctctgt gacggatatc
     1201 tgctcgagga ctgggtcggc gaatttctgc ttccccttac gacgcaactc gatgcggagg
     1261 ccatgcaggt gtcgagttac atcgccggga tggagatgct ggcaacgggc accacctgct
     1321 cgctcaatca ttcagtgacg acgacgagcc cggcgatcgt acgcgcaacc atcgagccgc
     1381 agcaggaact tggaattcgc caagtgtttg ccaaggagct gcgctgcaag acgcccggca
     1441 atccccgtca tgcgctgagc ctcgacgagg cgctggcaga ctgggccgag gaacaccgtc
     1501 gatgggacgg caagcacgac ggccgcgtgc gcatggccat ggtcatcgag tcgaatgcgc
     1561 attgggtcgc ggccggcatg tcgaccgaag agctgatttg ccgcggctac gagctcgcca
     1621 aaaacctcaa tgcacgcatt tcgacgcaca ttgccggcgg gacgttctcg ctcgagaaag
     1681 gattcctgaa gtacctgcgc gaaaccggcc gcaccgacgt tcgctacctg atgcagctcg
     1741 gcattctcga tccgcactgg gttctcattc acggcatcca ttgcaccgaa ctcgacatcg
     1801 agcacatggc ccgggtgggt tgcggcttcg tctatacgcc gacgagcgag tcgatgcgcg
     1861 gcggcggcat cggcccggcg gccaacgcct tgcgtgccgg tgtcaacgtg gcgctcggca
     1921 cggatggacc gatggtcgat tacagcgtcg acatggtgga gcagatgaag agctgcacgt
     1981 tgatgcagca cgtgcgccac cttgacccca cgcgcatgcc ggcggaggcg accatcgaaa
     2041 tggcgaccat caatgccgcc aaggcgctgg gcctcgatgg cgaaatcggc tcgatcgagc
     2101 cgggcaagcg cgccgacatt gccgttttcg atgtcgacaa gccctatgtc ggcgtcctgc
     2161 accggcccat ctcgagcttc atctgtgccg gcaaagggag cgacgtgcgc tgcgtgttcg
     2221 tcgatggcga tctggtctat cgcgcgggac agttcacccg tttccccgat ggtgagcggg
     2281 tgctgcgcga gggggaacgc atcgcccgcc gcgccctgga taaaaccggg ttgcggcatc
     2341 gagccgagca gcactggcgg gtgtgaacgg agaccagcgc ccgcgcatgg acatcctcgt
     2401 cgaagacgtg tcgcgcatct ggccgggtcg caaaggcacg tccgtcaccg cgttgcagga
     2461 cttcagctat catttccgct ccggacgatt cacctgtctg ctcgggccga gcggctgcgg
     2521 caagagcacg ttgatccaga tcatgggcgg catcgaggac gcgaccagcg gatcggtgcg
     2581 cgttgtcgat cctgctctat cctcgcgcgc ccgcccactc ggccgcgatt cggtgatggt
     2641 gtggcaaacg ctcaacctgt tcccctggcg caacgtgctc gacaatgtgg ctttcggttt
     2701 ggaaatgcag ggaatgccca gggcacagcg gtacgccaag gctcgcgcgc tgctcgcgtc
     2761 ggtcggcttg cgcggatttg aaacccatct gccgggtcaa ttgtcgggcg gcatgcgcca
     2821 acgcgtcgca ctggcgcgcg ccttgatcat ggcgcggccg atcatgctga tggacgagcc
     2881 gttcggcgcg ctcgatgccc aaaccaagat cgtcatgcag gaagagctgc tgcgcatctt
     2941 cgacgaaacc cgcaaaacca tcgtgttcgt cacccacgcc atcgaggagg cgatcttgct
     3001 cggcgacgag gtcatcgtga tgaccgcgcg tcccggccgg atcaaggagg tgatcaacgt
     3061 cgatctgccg cgtccgcgct cgctcgagct cgtgagcacg aaggaattcg gaatgctgtt
     3121 cgaccgcgcc tttcacctca tccgcgaaga ggtgatgaaa tcgctggagc agcaggcggc
     3181 aatgctggag gaagcgcaat gaagctctcc gcgcgcggcc gccgcatcct ggagttgacg
     3241 ctgcccgcgc ttaccgtggt cgcgttcgtc gccggctggg aggctctcgt cgacctgcgc
     3301 ggcattccgc cgatctatct gccggcgccg agtgccatcg ccgaatattt gctgcgcatg
     3361 atcgcggacg gctccatggg ctttaacctc ggggttacgc tgctgcggat tttcgccgga
     3421 tttgccgtcg cggccgtggc cggcgtcatg gtcggaatcg tgatgggcat gtcgcggatc
     3481 gcggcgcgcg tggccgaccc atggatcgcg gcgctctatc cgttgccgaa aatttcgctc
     3541 attcccctgc tcatcatctg gctcggcacc ggcgagacct ataagatcgt aattagtgcc
     3601 gtttcggcat tttttcccat cgtcatcagc gcctattccg gcatccgtca ggccgatcag
     3661 gggctgatca aggccgccaa ggatctgggg gccaatcggc ggcaggtgca gatgaaagtg
     3721 gtcattcccg ccgcgatacc gagcatcttc gccgggctgc atctgggaat gggcgtaacg
     3781 atcattctcg tggtcgccgc cgaaatgatc ggcggatccg gggagagcgg catgggctat
     3841 ctactcattc atgccggaca ggtgatggag accgagaaag tgttcgcgag cctggtcgta
     3901 ctcgcggtca tgggcgcgct cgtgatcaag gcgcagcaat ggatcgaccg ccgggtggca
     3961 ccgtggacgg cgctccacga cgggcactga gcacaaggag acatggccat gctgacacgc
     4021 cgaatttttt caacgctagt cttgaccctc gccgccgcgg ctgccctgcc ggcggccccc
     4081 ggccgctgcg ccgatctcgt gcgcgtcgga gaaggcccgt tcatcaccgg cggcggcttt
     4141 ctcgtcgccc gcgaaaaggg ctacttcaag cggctcggca tcgacatcga tacgaagatg
     4201 ttcatcgacg gagccctggc ggtgccggcg ctgatttcag gcgagctcga catcaccttc
     4261 atgaccgcca acgccggact gttcaactcg atcgccaagg gtgcgccgct cgtgctcttt
     4321 ctcgatcgcg gcaacaacaa ggtcggccgt gcctatacgg cgatgaacgt gacgcaggag
     4381 ctttacgacc aaggcgtgca tggtctggcg gactttgcaa agctcaaggg taagaagatc
     4441 ggactgagcg cgctgggcag catcaaccaa tatacgtccg cgctcgcctt acaacgtgcc
     4501 gggctcgacc cgcgcaagga cgtgcagtgg atcaccaacg tcccacagcc ggatctcatg
     4561 aagatgttgg ggaccaagca ggtcgacgcc accgatcttg cttacca
//
LOCUS       DATCWM010000195         6306 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_492950, whole genome shotgun sequence.
ACCESSION   DATCWM010000195 DATCWM010000000
VERSION     DATCWM010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6306
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_492950"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            306..1037
                     /locus_tag="VIQ50_03750"
     CDS             306..1037
                     /locus_tag="VIQ50_03750"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEY9359522.1"
                     /translation="MTSVANLQTPNGLLAALSPYDRSLLAPHLREVILFPGDLLHRPG
                     EKIEQVYFLQSGIVSLMAVLKGGTHVETASIGREGAVGTIEGFGSLHAFTSARVQVAG
                     SALRMAGPIFRSTLDESASLKESINHYHMSVMAHVQQITACNALHDLTSRLSRILLLS
                     ADRCADDIQLSQESLAEMLGVRRSSVTTAAAILRGAGAIDYRRAVIKILDREKLRKMV
                     CECYSTIRHTIDVGFNTHPSVDAWA"
     gene            complement(1112..2083)
                     /locus_tag="VIQ50_03755"
     CDS             complement(1112..2083)
                     /locus_tag="VIQ50_03755"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9359523.1"
                     /translation="MCARYAMLLLGCVIACNNPAAAENWPARPLTMVVPFAAGGGTDV
                     LGRILGRRLSEILGQQVIIENVGGAGGMVGSARVAKAPPDGYQFVLGSRADAINQTLY
                     KNPLYNFATDLAPVVLIADQPTLLVARNDLPVGNLAQFIAYARANQATMQMASAGAGS
                     TGHLDCMLLNAVIGINVTHVPYRGGGPAMQDLIAGRIDYICTLSATARQQIEGKLIKA
                     IAILSRDRSAMLPGLASAREQGLDFEASTWFGFFLPKGSPEPIIQKLNAATVAAIDTP
                     SVQEQLKDVGAVAVAPERRSPGYLHKFVLSEIAKNAAPIKAAGLAMD"
     gene            complement(2575..3492)
                     /locus_tag="VIQ50_03760"
     CDS             complement(2575..3492)
                     /locus_tag="VIQ50_03760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045027 - DNA end binding [Evidence IEA];
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HEY9359524.1"
                     /translation="MAPRAYWKGYLKLSLVSCPIALSPAASSSERVSFRQINKKTGNR
                     LRQQLIDEGTREPVEAEDKGRGYEVDKGVYIEVDDDELEAIQVESRHTIDIDSFVPAA
                     QIDKRFYDSPYYIAPTDSVGQEAFAVIRDAMRGKGMVALGRIVLAKRERVIALEPHGK
                     GMLATTLRYGYEVRKPEEFFSDIADVKVPGEMLKLAEHILETKMGDFDPTAFEDHYET
                     ALVELLRKKQAGFKPPKAKERAAAPRNVINLMEALRRSVQAERAAPVPAKKGRKRIEG
                     QREMLLPIEGKETTPRAAAKKSGARRKAG"
     gene            complement(4198..5172)
                     /locus_tag="VIQ50_03765"
     CDS             complement(4198..5172)
                     /locus_tag="VIQ50_03765"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9359525.1"
                     /translation="MQLTRRRLLHLAAAAAVVAPRIAGAQAYPSRPVRVIVPFAPAGP
                     TDVFARLMAQKLSEQMGAQFYVENIAGAGGNIGAGRAAQASADGYTILVNGGNHVVNP
                     ALYPHVPYDPIKDFDPVTIAVSAPAVLTVHPSLPARTVQDLVALIKANPGKYSFASPG
                     TGTPPHLVGELFRLSLGLDLVHVPFNGGGPAIGSTVAGHTPISFGSTAPAVPLVKDGK
                     LRALAVSSKRRSPALPDVPTTTESGYPEVVGESWFAAVVPIGTTREIVLQLQREIARA
                     IAQPDMQERLAALGYEPVASTPEDAAARFQMEMAKWGKVISHAGIKAQ"
     gene            5584..>6306
                     /locus_tag="VIQ50_03770"
     CDS             5584..>6306
                     /locus_tag="VIQ50_03770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359526.1"
                     /translation="MVDVGQFLGLRVAKRASRSAPAAAQAGILGDSQPIPRHAVRFSG
                     RQIAVLFVTLAAIAAVPVLLYPWPPLSDYINHLARMHVIAAISSDRDLALFYQIDWQV
                     IPNLMMDLIVPILERVMNVYLAGQVYTIMTFVLILSGTLALNRQLYRHWSVLPLIAFP
                     LLYNTVFLVGTMNYLFGIGLALWALASWVALRERALALRLAISSLFVLALFFCHLFAV
                     GVYGLGLLAFELHRLLELRRREP"
BASE COUNT         1115 a         2007 c         1966 g         1218 t
ORIGIN      
        1 cggtacggtt gctgacaaac aacccgcccg ctccctagct agggggccgc gaatgggtaa
       61 atcgcgagac gcccatcgga acccaccgat ccttgccgcg tttcagctat gtgccttttc
      121 gagtcggaaa gcgtaccgac cggcgagatc acaccgacct atatctggcc gccaggccca
      181 gaccccggat ttcaagccgc acgctggaac tgcagaacca ccgccggccg agcgctcgcg
      241 gccgcatggc cggtcggaag atgcaatgtc gtcgaaatgc tggccgccaa attgcgtgat
      301 cccgaatgac atcagtagcc aatttgcaaa ctcccaacgg acttctcgcc gcgctttctc
      361 cttacgaccg ctcgttgcta gccccgcatc tgcgcgaggt gattctcttc cccggagact
      421 tgctgcatcg gcccggcgag aagatcgaac aggtctactt tcttcaaagc ggcattgttt
      481 cgctcatggc ggtgctgaaa ggcgggacgc acgtggaaac cgcgagcatc ggacgcgagg
      541 gcgccgttgg cacgatcgaa ggattcggct cactgcacgc gttcacctcg gcgagggtgc
      601 aggtcgcagg ctctgcgctg cgcatggcag gtcccatctt tcgcagtact ctcgacgaga
      661 gcgcaagcct caaggaaagc atcaaccatt atcacatgag cgtcatggcc catgtgcagc
      721 aaatcaccgc ctgcaatgcg ctgcacgatc tgaccagccg gctgagccga atcctgctgc
      781 tctcggccga ccgatgcgcc gatgacatcc agctgagcca agaatcgctt gccgagatgc
      841 tgggggtgcg ccggtcgagc gtgaccacgg cagccgcaat cctgcgtggc gcgggcgcga
      901 tcgattatcg ccgcgcagtc atcaagatat tggaccgcga gaagctaaga aaaatggtgt
      961 gtgagtgcta ctcgacgatt cgccacacga tcgacgtggg attcaacacg catccttccg
     1021 ttgacgcctg ggcgtaaaaa cgccgccgcg cggacgcgcg ttaccgctgc cgccgctttc
     1081 caattgcgtc ggctcgccga atcctgattg ctcaatccat cgcgagaccg gcggctttga
     1141 tcggcgccgc gttcttcgcg atctcgctca acacgaattt gtgcagatag ccgggcgagc
     1201 ggcgttcggg cgcgaccgcg acggcgccga catccttgag ttgctcctgc accgacggcg
     1261 tgtcgatggc cgcaacggtg gccgcattaa gtttctggat gatcggctcg ggcgagcctt
     1321 tcggcaaaaa gaagccgaac caggtggagg cctcgaaatc gagcccctgc tcccgcgcgc
     1381 tggcgaggcc tggcagcatc gcggagcgat cgcgcgagag gatggcaatc gccttgatga
     1441 gtttgccttc gatctgctgg cgggcggtcg cgctgagcgt gcagatgtag tcgatgcgcc
     1501 cggcgatcag atcctgcatc gccggtcctc ccccgcggta gggaacgtgt gtcacgttga
     1561 tgccgatcac cgcgttgagc agcatgcagt cgagatggcc cgtggagccg gcacctgccg
     1621 aagccatttg catggtcgcc tggttcgcgc gcgcataggc gatgaactgg gcgagattgc
     1681 cgacgggcaa atcgttgcgc gcgaccagga gcgtgggctg atccgcgatc agcactaccg
     1741 gcgcgagatc ggtcgcgaaa ttgtagagcg gatttttgta gagcgtctgg ttgatggcgt
     1801 cggcgcggct gccgagaacg aattggtagc cgtccggcgg cgccttcgcc acgcgcgcgg
     1861 agccgaccat tcctccggcg ccgccgacgt tctcgatgat cacctgctgg cccagaatct
     1921 cggagaggcg tcggccgagg atgcgtccga gcacatcggt gcccccgccg gccgcgaatg
     1981 ggaccaccat ggtgagcggc cgcgccggcc aattctccgc ggcggccggg ttattgcagg
     2041 caatgacgca gccgagcagc agcatcgcat atcgcgcaca cacggttcgg ctccattcga
     2101 ccgccgcggg aaactccgcc ctggcgctca gccgatggca tagcaggaat cgcagcaacc
     2161 ggccgcatcg aacgcccgtg cgggcagcta tgcattggca aaatctgcac gcggcaagcg
     2221 aacttagtcg gcggtatgtg gcaagcaggt cacactcgaa agcgatgtga cgcagcggac
     2281 gcgggcgggc ggaaccgaac aagcggcgga gggttaagcc cgcaggtatt cgggggacgg
     2341 ggggatcatc aaataaatcg acgggcggcg atgggccgct gcgaaggcgc caaggcggaa
     2401 aaggccgtgc cgttcccggg cgctgctcgt cgatccatct ttgttgacgt tgctgcgctc
     2461 aacccatttt gcggggggat cgataacgcg tgaggggttg gaggggatca ccgcgtgctt
     2521 cgaaccaccc atggggaacg caggatgggt tgagcagagc aacgctgtcg ttgattaccc
     2581 cgccttgcgg cgcgcgccgg atttcttggc tgccgctcgc ggcgtggtct ctttgccctc
     2641 gatcggcagc agcatttccc gctggccttc gatacgcttg cggcccttct tcgccggcac
     2701 cggcgccgcg cgctcggctt gtacgctgcg tcgcagcgcc tccattagat tgatgacatt
     2761 gcgcggggcg gcggcgcgct ccttggcttt cgggggcttg aagccagctt gcttcttacg
     2821 caacagctcc accagagctg tctcgtagtg gtcctcgaac gcggtcggat cgaagtcgcc
     2881 catcttggtc tcgagaatgt gctcggcaag cttcaacatc tcgcccggca ccttgacgtc
     2941 cgcaatgtcg ctgaaaaatt cctccggctt gcgtacctcg tagccgtaac gcaacgtggt
     3001 cgccagcata cctttgccgt gcggctccaa cgcaatgacg cgctcgcgtt tggcgagcac
     3061 gatacggccg agcgcgacca tgcccttgcc gcgcatggcg tcgcggatca ccgcgaacgc
     3121 ttcctggccg acgctgtcgg tgggagcgat gtaataggga ctgtcataga agcgcttgtc
     3181 gatttgcgcc gcgggcacga aactgtcgat gtcgatggta tgcctgctct ccacctggat
     3241 agcttcaagc tcgtcgtcgt cgacttcgat gtacacgccc ttgtcaactt cgtagcccct
     3301 gcccttgtcc tcggcttcga ccggctcgcg cgtcccctcg tcgatcagct gctggcgcag
     3361 acggttgccg gtctttttgt tgatctgccg aaacgagacg cgctcggacg aggacgcggc
     3421 gggactgagc gcgataggac aagagacgag cgagagcttg agataacctt tccaatatgc
     3481 acgcggcgcc acgaccatac tccgagctaa aataatgctg ggattagcta gcaatttttg
     3541 cgcgccgctt ggagtcctgc ttttgttcct gcggcccccg atctagcggt cgaattgagc
     3601 gcgtgaacca gccgttgagg cggtagaccg cgccgcgcgt gtcagctcga agtgcggtta
     3661 aggaatggta acgctgtccg cgcacggaag cgatcaggag tctgcggacc caattgcgag
     3721 ccgctgtcgt tgcgggcttt ccgccaacga cgcgatactc ctaggcagac gacctctcgc
     3781 caccgtaagg aatcacgctg agactggcgg accaaaggca atccgaccaa cccttgcgct
     3841 taccaacctc ggcgcggatc caagccttat agtgatcgac gcatttccgg gagcaaaaac
     3901 tcttgaacgc gcgacggtgc cgcaccaggc cgaacttgcc gtggcagtac gcgcagtggt
     3961 tcttcatagc ctcctcccca atcgcgtcgg taccggccgg ttgaggacga acacaccgcc
     4021 acaattcgat gcaatagcga tctattgcaa tgcaccatta gtattacagc ggaatattga
     4081 gaattggttg ccgacgcgcg cggttctggc cgcgctcgca ggcgccatga tttcgctttt
     4141 gcagcttttc cgtttgcttc gtcggcgggt tttgcgcgag gccccggtcc gccgggttca
     4201 ttgcgccttg ataccagcgt ggctgatgac cttgccccat ttcgccattt ccatttggaa
     4261 acgggcggcg gcgtcctcgg gcgtgctggc gaccggctcg tagcccagcg ctgccaagcg
     4321 ctcctgcatg tcgggctgcg cgatggcacg cgcgatctcg cgctggagct ggagcacgat
     4381 ctcccttgtc gtcccgatcg gcaccacggc ggcgaaccac gattcaccca cgacctcggg
     4441 atatccggat tccgtcgtgg tggggacatc gggcagggcc ggcgagcgcc tcttgctgga
     4501 gaccgcaagt gcccgcagct tgccgtcctt caccagaggc accgccggcg ccgtcgagcc
     4561 gaaggaaatc ggcgtgtgac ccgcaaccgt cgagccgatc gccgggccgc cgccgttgaa
     4621 gggaacgtgc acgaggtcga ggccgagaga taggcggaac aattcaccca cgagatgggg
     4681 cggcgtgccg gtcccgggcg aggcgaagct gtacttgccc ggattagctt tgatcagggc
     4741 cacaagatcc tggacggtcc gcgcgggcaa cgacgggtgg acggtgagca ccgcaggcgc
     4801 ggacaccgcg atggtgaccg gatcgaaatc cttgatggga tcgtaaggca cgtgcgggta
     4861 cagtgcagga ttgaccacgt gattgccgcc gttgacgagg atcgtgtagc cgtcggctga
     4921 cgcctgcgcc gcgcgaccgg cgccgatatt cccgcctgcc ccagcgatgt tctcgacata
     4981 aaactgcgcc cccatttgct cggacagctt ttgcgccatc aggcgcgcga atacgtcggt
     5041 cgggcccgcc ggcgcgaacg gcacgatcac gcgcaccggc cgcgacggat aggcttgcgc
     5101 gcccgcgatc cgcggagcga ccacggcggc agcggcagca aggtgcagca atcggcggcg
     5161 ggtcagttgc attggcggtc ttgcaaccct tgcaatcgcg ccccttgggc ggcccctgat
     5221 caacttactc catttgccgg ctcacttccc gatgaatccg ccaatggcat tggctcatcc
     5281 gcaccgagca ccaacatctc atccacgtct gcctcgcgcg gccgcttgac ccgcgccgat
     5341 ttcctcggat caaaaggccg tcgccgcatc tcgcttgcgg tcggcctgct gcgcgagtgc
     5401 tgccaacgct caggtatgcg cgcgtcaagc tcaggaggca tgctcgcggt ggactttgcc
     5461 acatcgacgt gatacgtcga catcgtcggt cgaacacgcg ccagccggcg atgtgttgca
     5521 cttgcacgga tccctggtct gatttatcgc tttggtgagc agcgcccgag cggttagccc
     5581 gaaatggtcg atgtcggtca atttctcgga ctgcgcgtag ccaagcgggc gagccgatcg
     5641 gcgccagcgg cagctcaggc tggcatcctc ggggattctc agccgattcc ccgacacgcg
     5701 gttcgtttca gcggccgtca aatcgccgtc ctgttcgtca cgctagcggc catcgccgcg
     5761 gtcccggttc tcctctatcc ctggccgccg ctgtccgact acatcaatca tctcgcgcgc
     5821 atgcacgtga tcgccgccat cagcagcgat cgcgatctgg cgctgttcta ccagatcgat
     5881 tggcaggtca tccccaacct gatgatggat ctgatcgttc cgatcctgga gcgggtcatg
     5941 aacgtctatc tcgccggaca ggtctatacg atcatgacct tcgtcctgat cctttccggc
     6001 acacttgcgc tcaaccgcca actctaccgc cattggtcgg tcctgccgct gatcgccttc
     6061 ccgctgctct acaacactgt cttcctcgtg gggacgatga attacttgtt cggcatcgga
     6121 ctcgcgctct gggcgcttgc gagctgggtg gcgttacgcg agcgggcgct ggcgttgcgt
     6181 ctggcgatat catcgctgtt cgtcctggcg ctattcttct gccacctctt cgccgtcgga
     6241 gtttacgggc tcggcctgct cgcattcgag ctgcatcgac tattggagct gcgacgacgc
     6301 gagccg
//
LOCUS       DATCWM010000196         2932 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_379504, whole genome shotgun sequence.
ACCESSION   DATCWM010000196 DATCWM010000000
VERSION     DATCWM010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2932)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2932)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2932
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_379504"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..962
                     /locus_tag="VIQ50_03775"
     CDS             <1..962
                     /locus_tag="VIQ50_03775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HEY9359527.1"
                     /translation="PEVSMAFPAQPIDPPTLAMTFRINDSPLAGTEGDKVQSRVIRER
                     LLREAEGNVALRIEDSTEKDAMEVAGRGELQLGILIETMRREGFELSVSRPQVLLERS
                     ADGEMREPIEEVVIDVDQEHSGIVVQTLSERKAEMVEMRPSGGGRVRLTFHAPTRGLI
                     GYHGELLTDTRGTAVMNRLFHGYGPYRGEIAGRRNGVLISNDQGEAVAYALWNLEDRG
                     PMMIEPGCKVYRGMIVGEHTRGNDLEVNVLKGKKLTNIRTHAKDEAVRLIPPMQMTLE
                     KALAYIGEDELVEVTPKAIRLRKKLLDPNERRKDERRKEAERV"
     gene            1319..1828
                     /locus_tag="VIQ50_03780"
     CDS             1319..1828
                     /locus_tag="VIQ50_03780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY9359528.1"
                     /translation="MNTTLIEVRRAKPSDARAIATTHDDAWRNAYQGIIPGPELEKLI
                     NRRGPVWWDAAVRKGSRITVLAFGECVAGYANYGRNRARSLYYDGEIYELYLRPEFQG
                     LGFGRKLFSAARRDLVQSGLHSLVVWALSDNEQAVGFYRALGGKAVARSSERFGTRTL
                     DKVAFAWTS"
     gene            complement(1935..2846)
                     /gene="folD"
                     /locus_tag="VIQ50_03785"
     CDS             complement(1935..2846)
                     /gene="folD"
                     /locus_tag="VIQ50_03785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HEY9359529.1"
                     /translation="MTAKIIDGKAIAADLRGKVADAVHRLSRDRGITPGLAVVLVGNN
                     PASESYVASKIKMTAGSGMRSFDHRLPKETSEAELLALIARLNADPAVHGILVQLPLP
                     SQIDAHKIIAAVDPAKDVDGFNPVNAGRLSAGLPGLAPCTPLGCILLAKTVQPSLQGL
                     ETVVIGRSNIVGKPLVQLLLAENATVTVAHSKTRELPAVCRRADLLFAAVGRPELVRH
                     DWIKPGATVIDVGVNRVTGAAGKPRIVGDVAFAEVAKIAGAVTPVPGGVGPMTIACLL
                     ANTVRAACAIAGLREPAFGQRPSDDRE"
BASE COUNT          502 a          966 c          979 g          485 t
ORIGIN      
        1 cgccggaggt gagcatggcg tttcccgcgc agccgatcga tccgccgacg ctggcaatga
       61 ccttccggat caacgattcc ccgctcgccg gcaccgaggg cgataaggtg cagagccgcg
      121 tcatccgcga acggctcctg cgcgaggccg agggcaacgt ggcgctgcgg atcgaggact
      181 cgaccgaaaa agacgccatg gaggttgccg ggcgcggcga attgcagctc ggcatcctga
      241 tcgagaccat gcggcgcgaa ggcttcgagc tttcggtgtc gcggccgcaa gtgctgctcg
      301 agcgctccgc cgacggcgag atgcgcgagc cgatcgaaga ggtggtgatc gacgtcgacc
      361 aggagcattc cgggatcgtc gtgcagacgc tctccgagcg caaagccgag atggtcgaga
      421 tgcggccctc gggcggcggc cgcgtccgcc tcaccttcca cgcgccgacc cgcggcctca
      481 tcggctacca cggggaactc ctcaccgaca cccgcggcac cgccgtcatg aaccggctat
      541 tccacggcta cgggccctat cgcggcgaga tcgccggtcg acgcaacggc gtgctgatct
      601 ccaacgatca gggggaagcc gtggcctatg cgctgtggaa tctggaggac cgcggaccga
      661 tgatgatcga gccgggatgc aaggtttacc gcggcatgat cgtgggcgag cacacgcgcg
      721 gcaacgatct cgaggtcaac gttctcaagg gcaagaagct caccaatatc cgcacccatg
      781 ccaaggacga ggcggtgcgg ctcatcccgc cgatgcaaat gaccctggag aaggcgctcg
      841 cctatatcgg cgaggacgaa ctcgtggagg tcacgccgaa agcgattcgg ctgcgcaaaa
      901 agctgctcga tcccaacgag cgcaggaagg acgagcggcg caaggaggcc gagcgggtgt
      961 aaccgatgca ctcggcagat cccagcgccc tccgcatccg gctttcctac cgtcatcgcc
     1021 ggcatttgcc gcccaaagcc ggattgattc gccggccgcc cggcgttgcc gcgcgaatcg
     1081 cacccgtcga agcggtgctt tcagccgttt ccggttgccg gacgggccca tttcgccgtg
     1141 cctgcgtgtc ggctctgcaa cattgcgtgc gttagccggc gaacatgtcc gattttcccc
     1201 acttcgcgcc tgctccgcgg tgccgcggtg tggcaaatcc acatcaatgt ccgacgtagt
     1261 taatgccgca ttaaacataa ctcttgaagc gcggcggcgt gcttgcttca attgcgccat
     1321 gaacacgacc ctgatcgaag tccgccgcgc caagccgtcc gatgcccggg cgattgcgac
     1381 gacgcacgac gacgcctggc ggaacgctta tcagggcatt attccgggac cggaactcga
     1441 gaagctcatc aaccggcgcg gtccggtgtg gtgggacgcg gcggtgcgca aaggcagccg
     1501 gatcacggtg ctcgctttcg gcgagtgcgt ggcgggctac gccaattacg gacgcaatcg
     1561 cgcgcgcagc ctctattacg acggcgaaat ctacgaactc tacctgcggc cggaattcca
     1621 agggctcggc ttcggccgca agctgttctc cgccgcgcgg cgggacctgg ttcagagcgg
     1681 gctacacagc ctggtggtgt gggcgctctc ggataacgag caggcagtcg gcttctaccg
     1741 cgcgctcggc ggcaaggcgg tggcgcgctc ctcggaacgg ttcggcaccc gcaccctcga
     1801 caaggtcgcc ttcgcctgga cgagctgagc tacgctgtgt tcgctaagcc gtcattgccg
     1861 ggcatagcgc gtcggaagac gcgcttctgc ccgcgcatga cgagccccta acggtcgtcg
     1921 tagctgccgc gcctctattc tcggtcgtcg ctcgggcgct gaccgaacgc cggttcccgc
     1981 aggccggcga tggcgcaggc cgcgcgtacc gtattggcga gcaagcaggc gatggtcatc
     2041 ggccccacgc cgcccggcac cggcgtgacc gccccggcga ttttcgcgac ttcggcaaag
     2101 gcgacgtcgc cgacgatacg cggcttgccg gccgcgccgg tcacgcggtt gacgccgaca
     2161 tcgatgacgg tggcgcctgg cttgatccag tcgtggcgca ccaattcggg ccgccccacc
     2221 gcggcgaaca aaaggtcggc acgccggcag accgcgggaa gttcgcgcgt cttcgaatgc
     2281 gcgaccgtga ccgtcgcgtt ttccgcgagc aggagttgca cgagcggctt gccgacgatg
     2341 ttggagcggc cgatcaccac cgtttccagc ccttggagcg agggctgcac cgtcttggcg
     2401 agaagtatgc agccgagcgg ggtgcagggc gccaggcccg gcaggccagc cgacaggcgg
     2461 ccggcgttca cggggttgaa gccgtcgacg tcctttgccg gatcgaccgc ggcgatgatc
     2521 ttgtgtgcat cgatctgcga aggcaggggg agctgcacca ggatgccgtg gacggcggga
     2581 tccgcgttga gcctcgcgat caacgccagg agctccgcct cgctcgtttc tttcggcagc
     2641 cggtgatcga acgaccgcat gccgctgccg gcggtcatct tgatcttgct cgcgacatag
     2701 ctctcgctcg ccgggttgtt gccgacgagc acgaccgcga gtcccggcgt gatgccgcgg
     2761 tcgcgggaga ggcgatgcac ggcatcggca accttgccgc gtaaatccgc cgcgatcgcc
     2821 ttgccgtcga tgatctttgc ggtcatggct tgctgccgcg cgacagtatt ggattagcgc
     2881 gcaacgaagg gcattacccc atcgcgcaga ttttctccag cgcggcggcc ag
//
LOCUS       DATCWM010000197         2318 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_6969, whole genome shotgun sequence.
ACCESSION   DATCWM010000197 DATCWM010000000
VERSION     DATCWM010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2318
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6969"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            227..1483
                     /locus_tag="VIQ50_03790"
     CDS             227..1483
                     /locus_tag="VIQ50_03790"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEY9359530.1"
                     /translation="MLSAEKNRLLTQVGPGTPMGELLRRYWMPIGGTSEFDETPIKPI
                     RLLGEDLVLYKDQGGRFGLLERHCPHRRADLSHGFVEQRGIRCNYHGWLMDESGRCVE
                     QPYDDIVNPRSRAKERCATTAYPVKECAGLLWTYMGPQPVPELPVWEPFTWPNGFREI
                     VLSDIPCNWFQCQENSCDPVHFEWMHDNWSLRLSGEAGPYAAKHLKLKFEEFDYGFIY
                     KRVREGSDERNPYWTVGRLALWPNGFFLGNHFEWRVPVDDENTLSVAWFFMRVPKGRE
                     PYVQHRVPTWVSPIKDEQGRWITSHVINQDIIAWVGQGRIADRTKENIGPSDLGIVMI
                     RKRLFEDLEAVAQGRDPKAILRDPTVAKCVELPYFQKKESVEGIPLEEYEKYPLLKAR
                     LKAFRHCYGQPPEVRRAFELAMGLEN"
     gene            1613..1870
                     /locus_tag="VIQ50_03795"
     CDS             1613..1870
                     /locus_tag="VIQ50_03795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359531.1"
                     /translation="MPSAAYFRRQADICLRLAVIASDEEVSNRLIMMAREYAAKGAAL
                     TRQSGVDALPADDRSVPAEAEPERDATLPSEPNGVDSAADH"
     gene            complement(1935..>2318)
                     /locus_tag="VIQ50_03800"
     CDS             complement(1935..>2318)
                     /locus_tag="VIQ50_03800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359532.1"
                     /translation="TEGRGRGAAEGRGEMCLEPSAGLADWMMRTIERAAPRDQQRAGV
                     ETMRIRSAAMARLVAASCPSDPRPDAMSRVAAATDRLQVMLFTVMSASPMLQQFYDSL
                     DEKQKAGLARALHEAKRSGAVGGRS"
BASE COUNT          402 a          771 c          757 g          388 t
ORIGIN      
        1 ccgacgagat cgtgcggcgc ggggcggcgc gcgccggact gacgtggcac tatgcgcggc
       61 cgccggtgca agggctcgaa tacgagatgg actgccgctc ggtcggccgg gaaagcgccg
      121 tctgaccgac gcgttcggcg cggcccgccc cgctgggcca agccgttgct cggtgccgaa
      181 attccaataa caatcggcga gcgcaacaac ggcggcgagg tcaggcgtgc tcagcgcgga
      241 aaaaaatcgc cttctcaccc aggtcggccc gggcacgccg atgggcgagc tgttgcgccg
      301 gtattggatg ccgatcggcg gcacgagcga gttcgatgag actccgatca agcctattcg
      361 cctcctgggc gaggacctcg tgctctacaa agaccagggc ggccgtttcg ggctgctcga
      421 gcgccactgc ccccaccgcc gcgccgacct ctcccatgga ttcgtcgagc agcggggcat
      481 ccgctgcaat taccacggct ggctgatgga tgagagcggg cgctgcgtcg agcagcccta
      541 tgatgacatc gtcaatccgc gctcgcgcgc caaggagcgt tgcgcgacga ccgcctatcc
      601 ggtgaaggaa tgcgcggggc tgctgtggac ctatatgggg ccgcagccgg tgccggagtt
      661 gccggtatgg gagccgttca cctggccgaa cggctttcgc gagatcgtgc tctccgacat
      721 tccctgcaac tggtttcagt gccaggagaa ctcctgcgat cccgtgcatt tcgagtggat
      781 gcacgacaac tggagcctgc ggctgagcgg cgaggcgggc ccctacgccg ccaagcatct
      841 caagctcaag ttcgaggaat tcgactacgg cttcatctac aagcgcgtgc gcgagggctc
      901 cgacgaacgc aatccgtatt ggaccgtggg ccgcctcgcg ctgtggccga acgggttctt
      961 cctcggcaac catttcgaat ggcgcgtgcc cgtcgatgac gagaacacgc tcagcgtcgc
     1021 ctggttcttc atgcgcgtgc cgaagggacg cgagccctac gtccagcacc gcgtcccgac
     1081 atgggtaagc ccgatcaagg acgagcaggg ccgctggatc accagccacg tcatcaacca
     1141 ggacatcatc gcctgggtcg gtcagggccg gatcgctgac cgcacgaagg agaacatcgg
     1201 cccaagcgac cttggaatcg tgatgatccg caaacgcctg ttcgaggatc tcgaggccgt
     1261 cgcccaaggc cgggatccga aggcgatcct gcgcgacccc accgtcgcca aatgcgtcga
     1321 gctgccgtac ttccagaaaa aggagagcgt cgaaggtatt ccgctcgagg agtacgagaa
     1381 ataccccctg ctgaaggcgc gcctgaaggc gtttcgccac tgctatgggc agccgcccga
     1441 ggtccggcgg gccttcgagc tggccatggg cctcgagaac tagccatcag cggtattatg
     1501 ccaccctagg cggttgcggc cacggctgcc gcgctctgcc tccacaatca ggcgcttcgg
     1561 tacggaaccg taccgaacct tccgcgttga aaaagatccc gggggctctg ccatgccgag
     1621 cgctgcctat tttcgccgcc aagctgacat ctgccttcgc cttgcagtga ttgcctccga
     1681 cgaggaggtt tccaatcggc tgatcatgat ggcgagggag tacgcggcca agggcgccgc
     1741 gctgaccagg caatcgggag tggatgcgct ccccgccgac gaccgctcgg tacctgccga
     1801 ggccgagccc gagcgcgacg cgacgctgcc ctcggaaccg aatggggtgg attcggccgc
     1861 cgatcattag ggtagggttg acctagctca accctttttg gccgggcttg tcgggttcac
     1921 ccgactgctg gtggtcaaga gcgcccgcca acggcgcctg aacgcttggc ttcgtgcagc
     1981 gcccgggcga ggcccgcctt ctgcttctcg tcgagcgaat cgtagaactg ctgcaacatt
     2041 ggactcgcgc tcatcaccgt aaacagcatg acctggaggc gatccgttgc cgccgccacg
     2101 cggctcatcg cgtcggggcg cggatcgctc gggcaggacg cggcgacaag ccgcgccatg
     2161 gcggctgatc tgatccgcat cgtttctacg cccgcgcgct gctggtcgcg cggcgctgcg
     2221 cgctcgatcg tccgcatcat ccaatcggcc aagccggcgc tgggctcgag gcacatctcg
     2281 ccgcgccctt cggcggcgcc gcggccgcgc ccctcggt
//
LOCUS       DATCWM010000198         2123 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_12374, whole genome shotgun sequence.
ACCESSION   DATCWM010000198 DATCWM010000000
VERSION     DATCWM010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2123
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12374"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..860)
                     /locus_tag="VIQ50_03805"
     CDS             complement(<1..860)
                     /locus_tag="VIQ50_03805"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9359533.1"
                     /translation="MTRTIVATLVALIAVSSAAAAPDYPDRPIKFMHGFPPGGNVDII
                     GRLLGNEMSKGLGQSIIIEPKPGVAGSLAAEAVARSEPDGYTLLVVPSAHPAHGALSR
                     NVNYKVVEDFEWISVASFYPFLICVRKDSRFQTLTQLIDEARKNPGVLKYGSAGVGSI
                     LHTTVELIGNETKTKFLHIPYRGEAPAMTGLLQGDIDFIAATSGPISARIRSGEFRAL
                     AVTGKTRWRDFLDVPTVAEEGIPGFEVISWTGLAGPAKLPRLIVDKLNAEVRRAVSVP
                     DVKDKLESMGG"
     gene            complement(909..>2123)
                     /locus_tag="VIQ50_03810"
     CDS             complement(909..>2123)
                     /locus_tag="VIQ50_03810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HEY9359534.1"
                     /translation="VAVATGAPGKVHLLPATMETTQLGWYDNAQKPVLTVKPGDSVIM
                     ETMMHFHDRLVPGATLDMLLKIRLEVPGRGAHTLTGPIYVEGAEPGDVLKVKINRIVP
                     RSYGVNMNYPGIAGQFPKEFPEGRVRYVYLDWDNKVAEFLPGVFVPLRPFPGILGVAR
                     AEPGRYSTVPPGRYGGNLDLRELTAGSTLYLPVFVKGALLWASDAHAAQGNGEINLTG
                     IETAFREFNITVDVIKGRSLEWPRAETPTHWLTLGYDEDLNKALEILKSETVKFITEE
                     RRVAAPDAQRIMMQRWDCRISEVVDIVKGTFCFNPKDARARPPAALPSKETATDYVTV
                     GSNADLNKSMDAASMAMINLLAEKRQLDRLDAYGLASVAMDCRIAPPTGSEVAVHCLT
                     PKSLWRTPARTQ"
BASE COUNT          363 a          660 c          686 g          414 t
ORIGIN      
        1 ccgcccatgc tctcgagctt gtccttgacg tcggggactg aaacggcccg gcgcacctcg
       61 gcattgagct tgtcgacgat cagccttggc agcttcgcgg gaccagcgag cccggtccac
      121 gagatgactt caaatcccgg gatgccttcc tccgcgaccg tgggcacgtc gagaaaatcg
      181 cgccagcgcg tcttgcccgt gacggcgagc gcgcgaaatt cgcccgagcg gatgcgcgcg
      241 ctgatcggtc ctgacgttgc cgcgatgaaa tcgatgtccc cctgcaggag gccggtcatg
      301 gccggcgcct cgccgcgata gggaatgtgc agaaactttg ttttggtctc gttgccgatg
      361 agttcgaccg tggtgtggag gatcgagccc acgccagcgg agccgtattt caggacgccg
      421 ggatttttgc gcgcctcatc gatcagttgc gtgagtgtct ggaagcgaga gtccttgcgc
      481 acgcaaataa gaaacggata gaagctggcg accgaaatcc attcgaaatc ttcgacgact
      541 ttgtagttta cgttcctgga gagcgcgcca tgcgcggggt gcgcactggg aacgaccagc
      601 agggtgtagc cgtccggctc gctgcgcgcc acagcctccg cggcgaggct gccggcgacg
      661 ccgggcttgg gctcgatgat gatcgattgc ccaagccctt tcgacatctc gttgccaaga
      721 agccggccga tgatgtccac gttccctccc ggcgggaagc cgtgcatgaa cttgatcgga
      781 cgatcaggat aatccggcgc cgccgccgcg ctgctgaccg caatcaacgc gacaagcgtg
      841 gcgacgattg ttctggtcat cgtatttctc tgccgtgggt acttgttctt ggaaatcacg
      901 gccgtcgatc actgcgtgcg cgcaggggtg cgccacaggc tcttcggcgt caggcagtgg
      961 acggcgactt cgctgccggt tggcggcgcg atacggcaat ccatggccac gctggccaag
     1021 ccgtaggcat cgaggcgatc gagctgccgc ttctcggcaa gcaggttgat catggccatc
     1081 gacgcggcat ccatcgactt gttgagatcg gcgttgctgc cgacggtaac gtagtcggtc
     1141 gccgtttcct tgctcggcaa cgccgccggg ggcctggccc ttgcgtcctt cggattgaag
     1201 cagaacgtgc ccttcacgat gtcgacgact tcggagatgc ggcaatccca gcgctgcatc
     1261 atgatgcgct gggcgtccgg cgcggcgacg cgccgctcct ccgtgatgaa cttcacggtc
     1321 tccgacttga gaatctcgag cgccttgttg aggtcttcat cgtagccgag ggtgagccag
     1381 tgcgtcggcg tctcggcgcg gggccattcg agcgatcggc ccttgatcac gtcgacggtg
     1441 atgttgaact ccctgaacgc ggtctcgatg cctgtgagat tgatctcgcc attgccttgc
     1501 gcggcatgcg cgtcgctcgc ccacaacagc gcgcccttca cgaacacggg caggtaaagc
     1561 gtcgacccgg cggtcagctc acgcaggtcc aaattgcccc cgtagcgtcc cggcgggacg
     1621 gtgctgtagc gtccgggctc ggcgcgggcc acgccgagga ttccgggaaa cggccgcagc
     1681 ggaacgaaaa caccgggcag aaactcggcc accttgttgt cccagtcgag atagacgtag
     1741 cggactctcc cttccggaaa ctccttgggg aattgcccgg caattccggg atagttcatg
     1801 ttcacgccgt aggagcgcgg cacgatcctg ttgatcttca ccttgagcac gtcgccgggc
     1861 tcggcgcctt cgacatagat cggcccggtg agcgtatggg cgccgcggcc cggcacctcc
     1921 aggcgaatct tgagcagcat gtccaacgtc gcgccgggca cgaggcgatc gtggaaatgc
     1981 atcatggttt ccatgatgac gctgtcgccg ggcttgacgg tgagcacggg cttctgcgca
     2041 ttgtcgtacc agcccaactg cgtggtctcc atggttgccg gaagcagatg gactttgccc
     2101 ggagctccgg tcgcgaccgc gac
//
LOCUS       DATCWM010000199         7258 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_374271, whole genome shotgun sequence.
ACCESSION   DATCWM010000199 DATCWM010000000
VERSION     DATCWM010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7258
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_374271"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..247)
                     /locus_tag="VIQ50_03815"
     CDS             complement(<1..247)
                     /locus_tag="VIQ50_03815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009467163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1330 domain-containing protein"
                     /protein_id="HEY9359535.1"
                     /translation="MPKGYWIPHIDVSDPEGYKAYVAATPAAHAKYGGRALVRGGTQE
                     VVEGKARSRNVLREFADYATALACYRSPEYQRARPLRL"
     gene            complement(261..1013)
                     /gene="pyrF"
                     /locus_tag="VIQ50_03820"
     CDS             complement(261..1013)
                     /gene="pyrF"
                     /locus_tag="VIQ50_03820"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011470816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0044205 - 'de novo' UMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HEY9359536.1"
                     /translation="MKANAACCRQSARRRSAVKLDPRERLIVALDVPSVREAEALVAR
                     LGETVSFYKIGYQLAFAGGIDFARVLVSAGKRIFLDLKLHDIANTVARGVEGVARLGA
                     SFLSVHAYPQTMHAAVDARKGSALRLLAVTVLTSYDDADLAAAGYDFTVSELVGERAA
                     QARDVGIDGLVCSGEEAAMLRPIVGAGMVLVTPGIRPAGAATGDQKRIMTPAAALAAG
                     ADHLVVGRPIVAAPDPMAAADAIIAEIAGVMP"
     gene            complement(1010..1591)
                     /locus_tag="VIQ50_03825"
     CDS             complement(1010..1591)
                     /locus_tag="VIQ50_03825"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEY9359537.1"
                     /translation="MAAPKILVIPGSLRAKSYNVRLAALATKELMLADADVTRISLLD
                     YPLPIYDADTAEAAGPPPNAVKLKQLMSVHQGVFIASPEYNASITPLIKNTIDWVSAV
                     RERGEASLAAYQNRVFALGGASPGRSGATHSLLALRQVLAVGCRALVIAEQVTVPNAE
                     QAFDDMDQLKDARAAGQLKLVIRKLVDTAKLLA"
     gene            complement(1658..2248)
                     /locus_tag="VIQ50_03830"
     CDS             complement(1658..2248)
                     /locus_tag="VIQ50_03830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018459604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEY9359538.1"
                     /translation="MRHFEEKNGIRLDDEVRFIRSWIEKPLTTGAVTPSGRALARTMA
                     TYVDPSRPGPVIELGPGTGPVTEALLAQGIESSRLMLIEFDPTFCRLLRARYPDATVV
                     QGDAYALKHLLSGVLQRPAAGVVSGLPLFTKPLRMRLRLLFEAFALMAPGAPFVQFTY
                     NAVAPIPKWLDRVSVEASERVWMNIPPARVWVYRRD"
     gene            complement(2555..3685)
                     /gene="dnaJ"
                     /locus_tag="VIQ50_03835"
     CDS             complement(2555..3685)
                     /gene="dnaJ"
                     /locus_tag="VIQ50_03835"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011470813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HEY9359539.1"
                     /translation="MAKRCYYDVLGVQRTAGESELKSAFRKLAMKWHPDRNPGDNSSE
                     VRFKEINEAYEILKDPDKRAAYDRFGHAAFEHAGPGAAGGFGDVASAFADIFDDLFGM
                     GGGRRGRGGGRERGADLRYNMEITLEEAYSGKNAQVRIPTSVTCEACSGSGAKSGTRP
                     KACPTCGGQGRIRHAQGFFTLERTCPACQGRGQVIDNPCPSCSGSGRVTRERSLSVNI
                     PSGVEDGTRIRLAGEGEAGVRSGPAGDLYIFLAIGAHPFFHREGADLHCRVPISMVLA
                     ALGGEIEVPTIEGNHSRVKVPEGTQSGRRFRLQGKGMPVLRSKQCGDMYVQVLVETPQ
                     KLSKQQRELLNEFERLSSKETQPETAGFFGKVKEFLGRSGAV"
     gene            complement(3836..5809)
                     /gene="dnaK"
                     /locus_tag="VIQ50_03840"
     CDS             complement(3836..5809)
                     /gene="dnaK"
                     /locus_tag="VIQ50_03840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012169221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HEY9359540.1"
                     /translation="MPKGPGRPAADKRKRDMGKVIGIDLGTTNSCVAVMEGKTPKVIE
                     NAEGMRTTPSIVAFTDDGERLVGQPAKRQAVTNPERTIFAVKRLIGRRYDDPMVEKDK
                     KLVPYKIVRASNGDAWVEIEGKTYSPSQISAFVLQKMKETAEAYLGQKVEQAVITVPA
                     YFNDAQRQATKDAGRIAGLEVLRIINEPTTASLSYGLDKQKTGTIAVYDLGGGTFDIS
                     ILEIGDGVFEVKSTNGDTFLGGEDFDMRLVNYLADEFQKEQGIDLRRDKLALQRLKEA
                     AEKAKIELSSTTQTEINLPFITADASGPKHMTMKLTRAKFEALVDDLVQKTVEPCRLA
                     LKDAGLSAAEINEVVLVGGMTRMPKVQEVVKQLFGKEPHKGVNPDEVVAVGAAIQAGV
                     LQGDVKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQVFSTAEDNQNAVTIR
                     VFQGEREMASDNKMLGQFDLVGIPPAPRGVPQIEVTFDIDANGIVNVQAKDKGTGKEQ
                     QIRIQASGGLSETDIQRMVKDAESHAEEDKKRKAEVEAKNHAEALVHSTEKALAEHGS
                     KVGEGDRRAIENAMADLKEALKGSDAEAITAKTNALAQASMKLGEAMYKQAQEGAAAP
                     GGPGGGDGSGKTDDVVDAEFTEVDDDKKNKKSA"
     gene            6049..6684
                     /locus_tag="VIQ50_03845"
     CDS             6049..6684
                     /locus_tag="VIQ50_03845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003589486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoglutarate-dependent dioxygenase AlkB"
                     /protein_id="HEY9359541.1"
                     /translation="MTVSRSLSGLRLVPGYLDRASQEALLSALGTVFAAAPLYTPRMP
                     KSGKPLSVRMTNCGPLGWVTDESGYRYQPLHPQTGNPWPAMPDILVNAWKALARYTHL
                     PESCLINYYGPAAKMGLHQDRDERDFEAPVVSLSLGDTCVFRVGGTTRKDPTRTLHLA
                     SGDAIVLGGKARLAFHGVDRILPRTSTLLAEGGRINLTLRRVSAPGEHQAR"
     gene            complement(6696..7076)
                     /locus_tag="VIQ50_03850"
     CDS             complement(6696..7076)
                     /locus_tag="VIQ50_03850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY9359542.1"
                     /translation="MWSHGSFYWNELMTRDVEQAKRFYSSSIGWTFEPMPMANGTYWL
                     AKMDDKPVAGIFPLSGPEFEGVPEGWMSYLAVDDVDARIEAAKAAGAKVMREPFEVPD
                     VGRIAILQEPGGAGIGWITPVDDA"
BASE COUNT         1243 a         2375 c         2207 g         1433 t
ORIGIN      
        1 caagccgcaa cggtcgggcg cgctggtatt ccggagagcg atagcaagca agggcggtgg
       61 catagtcggc aaattcgcgc agcacgttgc gggagcgagc cttcccctcg accacctcct
      121 gcgtgccgcc tcgcaccagt gcgcgcccgc catacttcgc atgcgccgca ggggttgcag
      181 cgacataggc cttgtagcct tccggatcgc tcacatcgat gtgcggaatc caatagccct
      241 tcggcatctc gacctccctg tcacggcatc acgccggcga tctcggcgat aattgcgtcc
      301 gcggctgcca ttggatcggg agccgcgacg atcggacggc cgaccacgag gtgatcggcc
      361 ccggcggcga gggccgcggc cggcgtcata atgcgcttct ggtcgcctgt tgcggcgccg
      421 gccgggcgga tgcccggcgt gaccaacacc atccccgcgc cgacaatcgg gcgcagcatc
      481 gccgcctcct cgcccgagca cacgaggccg tcgatgccga cgtcgcgcgc ctgcgccgcg
      541 cgttcgccga cgagttccga gaccgtgaaa tcatagcctg ctgcggcgag gtcggcgtca
      601 tcgtaggagg tgagcacggt cacggcgagg aggcgcagcg ccgacccttt gcgcgcgtcg
      661 accgcggcgt gcatcgtctg tggataggcg tgcacggaca gaaacgatgc cccgagtcgc
      721 gccacgcctt cgacgcctct cgcgacggtg ttggcgatat cgtgcagctt gaggtcgaga
      781 aaaatgcgtt tgccggcgct aaccagcacg cgcgcgaagt caatcccgcc cgcaaaggcg
      841 agctgataac cgatcttgta gaacgaaacg gtttcgccga gacgtgcaac cagcgcctcg
      901 gcctccctaa ccgaaggaac gtcgagcgcg acgatcaacc gctcacgcgg atcgagtttc
      961 acggcggatc tcctccgcgc cgattgccgg caacatgcag catttgcctt catgccaaga
     1021 gcttggctgt atcgacgagc tttcgtatga cgagcttgag ctgaccggcc gcgcgcgcat
     1081 ccttgagttg gtccatgtcg tcgaaggcct gctcggcatt cggcaccgtc acctgctcag
     1141 caatgacgag cgcgcggcag ccgaccgcca ggacctggcg cagtgccagc aacgaatgcg
     1201 tcgcgcccga ccgcccgggc gaggcgcctc ccagcgcgaa tacgcgattc tggtaagcgg
     1261 cgagcgacgc ctcgccgcgc tcccgcaccg ccgagaccca gtcgatcgtg ttcttgatca
     1321 gcggcgtgat cgaagcgttg tattccgggc tggcgatgaa tacgccttga tgcaccgaca
     1381 tcaattgctt gagcttgacg gcgttgggcg gcggtcccgc tgcctcggcg gtgtcggcgt
     1441 cgtagatcgg cagcggataa tccaagagcg aaatgcgggt gacgtccgcg tccgccagca
     1501 tcaattcctt ggtggcgagc gccgcaagcc gcacgttgta cgacttcgcc cgcaacgagc
     1561 cgggaatgac caggattttc ggagcggcca tgacagacgg tggaccatgg attcggcctg
     1621 catgatacgc acaagtttca tggtctgtcg tctttcgtca gtccctccga tacacccaca
     1681 cccgtgccgg cggaatattc atccacaccc gttcggaggc ttccacgctt acgcggtcca
     1741 gccacttggg aatcggcgcg accgcgttat aggtgaactg cacgaacggc gcccccggcg
     1801 ccatcaaggc aaaggcttcg aacaggagcc gcaggcgcat tcgcaatggc ttggtaaaga
     1861 gcggcaagcc ggagaccacc cccgccgccg gtcgttgcag caccccgctc aacagatgct
     1921 tcaaggcgta ggcgtctccc tgcacgacgg tggcgtctgg atagcgcgcg cgcaacaggc
     1981 ggcagaaggt cggatcgaac tcgatcaaca tgaggcgcga cgactcgatc ccttgtgcca
     2041 gcagcgcctc ggtgaccggg ccggtgccgg ggccaagctc gatgacggga cccggccgac
     2101 tcggatcgac ataggtcgcc atggtgcgag cgagtgcccg gcctgaaggc gtcacggcgc
     2161 cggtggtcag cggcttctcg atccaggagc ggatgaagcg cacctcgtca tcgagacgaa
     2221 taccgttctt ttcctcgaag tgacgaatcc gagtctcgat cctctttctt tgcgtatcga
     2281 acttctgctc gaatttcctt ttgtgatttt cgaactgctg ctcgagcttt ttttcgagcg
     2341 cgcccttcct ctgctcgaac agctgaattt gccgctcgat ccgcttttcg agcgcgccct
     2401 ttctcaattc gaaaaggcgc ttatgtcttt caagcttctg ctcgaggagt tgcagggctg
     2461 gaagctgcat cttggcccta acgctacgca atgactggcg atttgagccc taaatcggta
     2521 aaggccacgc gtgcgggggt caagcggcaa tttgtcaaac agcgccggaa cgacccaaga
     2581 actccttcac tttgccgaag aatcccgccg tttccggctg cgtctccttg gaggacaatc
     2641 gctcgaactc attcagcaat tcgcgttgct gcttgctgag tttttgcggc gtctcgacga
     2701 gaacctgcac atacatgtcg ccgcattgtt tggagcgcag cacgggcatg cctttgcctt
     2761 gcaaacggaa gcgccgtccc gattgggtgc cctccggcac cttgacccgg ctgtgattgc
     2821 cttcgatggt cggcacctcg atctcgccgc ccagcgcggc aagcaccatt gagatcggca
     2881 cccgacaatg caaatcggcg ccctcgcggt ggaagaacgg atgggcgccg atggcgagaa
     2941 aaatatagag gtcgcctgca ggcccactgc gcacgcccgc ttcgccttcg cccgcaagcc
     3001 tgatgcgggt gccgtcctcg accccggagg gaatgttgac cgagagcgag cgctcgcgcg
     3061 tcactcgtcc agagccggaa caggacggac aagggttgtc gatcacctgg ccgcgaccct
     3121 gacaggccgg gcaggtccgc tccaacgtga agaagccctg agcatggcgg atgcgtccct
     3181 gaccgccgca ggttggacag gctttggggc gggtgcctga cttggcgccc gaccccgaac
     3241 aagcctcgca ggtcaccgag gttggaatgc gcacctgggc attctttccc gaataggcct
     3301 cctccagagt gatttccatg ttgtaacgca gatcggcgcc acgctcgcga ccgccgccac
     3361 gtccgcgccg cccgccgccc atgccgaaca ggtcatcgaa tatgtcggcg aaggccgacg
     3421 ctacgtcgcc aaagccgccg gcggcgccgg ggccggcgtg ctcgaatgcg gcgtggccga
     3481 agcggtcgta agcggcgcgc ttatccggat ctttgaggat ttcataagcc tcattgatct
     3541 ccttgaagcg gacttcgctg ctgttgtcgc cggggttgcg atcgggatgc catttcatcg
     3601 ctagcttgcg gaaggcggat ttcagttcac tttcgcccgc ggtgcgctgg acccccagaa
     3661 cgtcgtaata gcagcgcttg gccatgcccg cgtttacccc tgtcatgtct gccgtggcgt
     3721 catcgccgaa tcttactcgg tcgtccatga tgcttcaaaa aatatgcacc cccgaggttt
     3781 ggccccgggg gtcttggttg caatcgaagc cggcatggcg ggcgcctcgc cgagcttagg
     3841 ctgacttctt gttcttcttg tcgtcgtcga cctcggtgaa ttccgcgtcg acgacatcgt
     3901 cagtcttacc ggaaccgtcg ccgccgccgg gaccgccagg cgcggcggca ccttcctggg
     3961 cctgcttgta catggcctcg ccgagcttca tcgaggcttg cgccagcgcg ttggttttgg
     4021 ccgtgatcgc ctcagcatcg cttcccttga gcgcttcctt gagatcggcc atcgcgttct
     4081 cgatcgcgcg ccgatcgcct tcgccgacct tggagccgtg ctcggcgagc gctttctccg
     4141 tggaatggac gagtgcctcg gcatgattct tcgcctcgac ctcggccttg cgcttcttgt
     4201 cttcttcggc gtggctctcg gcatccttga ccatgcgctg gatgtcagtc tcggataagc
     4261 cgcccgacgc ctggatgcgg atctgctgct ctttgcccgt gcccttgtcc ttggcctgca
     4321 cgttgacgat gccgttcgcg tcgatatcga aggtcacctc gatctgcggc acaccgcgcg
     4381 gcgcgggggg tattccgacc aggtcgaatt ggccgagcat cttgttgtcg gacgccatct
     4441 cgcgctcgcc ttggaacacg cggatcgtca ccgcgttttg attgtcctcg gcggtggaga
     4501 acacctggct cttcttggtc gggatggtgg tattgcggtc gatgaggcgc gtgaacacgc
     4561 cgccgagcgt ctcgataccc agcgacagcg gcgtcacgtc gagcaacagc acgtccttga
     4621 cgtcaccttg caacacaccg gcctggatcg cagcgccgac cgcgacgacc tcatcaggat
     4681 tgacgccctt gtgcggctcc ttgccgaaca actgtttgac gacctcttgc accttcggca
     4741 tgcgcgtcat gccgccgacg agaacgacct cgttgatctc agccgcggat aagccggcgt
     4801 ctttgagcgc cagccgacac ggctcgacgg tcttctgcac cagatcatcc accagcgcct
     4861 cgaatttggc gcgggtgagc ttcatggtca tatgcttggg gcccgacgcg tcggcggtga
     4921 tgaacggcag gttgatttcg gtctgggtgg tggaggagag ttcgattttg gctttctccg
     4981 ccgcctcttt gagccgctgc aacgcgagct tgtcgcggcg cagatcgatg ccttgctcct
     5041 tctggaattc gtcggccaga tagttgacca ggcgcatgtc gaagtcctcg ccgccgagga
     5101 aggtgtcgcc gttggtcgac ttcacctcga acacgccgtc gccgatttct agaatcgaaa
     5161 tgtcgaaggt acccccgccc aggtcgtaaa ccgcgatggt gccggtcttc tgcttgtcga
     5221 ggccatagga cagcgaggcc gtggtcggct cgttgatgat gcgcaacact tccaggccgg
     5281 cgatgcggcc ggcatccttc gtggcttggc gttgagcgtc gttgaagtag gccgggacgg
     5341 tgatcaccgc ctgctcgacc ttctggccga gataggcctc cgccgtctcc ttcatcttct
     5401 gcagaacgaa agcggagatc tgcgagggcg aataagtctt gccttcgatc tcgacccaag
     5461 catcgccgtt cgaggcgcgc acgatcttgt agggaaccag cttcttgtcc ttttccacca
     5521 tcgggtcatc gtagcggcgg ccgatcaggc gcttgaccgc gaagatggtg cgctcgggat
     5581 tggtgacggc ctggcgcttg gccggctggc cgaccagacg ttcgccgtca tcggtgaagg
     5641 ccacgatgga gggcgtcgtg cgcataccct ctgcattttc gataactttc ggcgtcttgc
     5701 cttccatcac ggcgacgcac gaattggtgg tgccgaggtc gatgccgatg accttgccca
     5761 tgtctcgctt cctcttgtct gcggcaggtc ggccgggccc tttcggcacc cgaacgggag
     5821 attccgcgag acccgcgggg ccccctgatc cgacccccta aaaaccactt cgatgccgcg
     5881 cccatgcggc gtcttggctc atataggagg gcgggtttgg gccgcaagac atatgatcac
     5941 ggattcgcga ccggccggcg aggccgccgg cgttcgcccg taaaacgacc gatcgaaaaa
     6001 gccgcgctac cggtttgaca aggtgcaacg gttaaggacg atgacgtcat gaccgtctcg
     6061 cgctcgcttt ccggccttcg cctcgtgccg ggctatcttg accgggcctc ccaggaagcg
     6121 ctgctcagcg cgctcggcac cgtgttcgcc gccgcgccgc tctacacccc gcgcatgccc
     6181 aaaagcggaa agccgctctc ggtgcgcatg acgaattgcg ggccgctcgg gtgggtcacc
     6241 gatgaatccg gctaccgcta ccagccgctg catccgcaaa ccgggaaccc gtggccggcg
     6301 atgccggata tcctggtgaa cgcctggaag gcgctcgcgc gctatactca cctgcctgaa
     6361 agttgcctca tcaactatta cggcccggca gcgaagatgg ggctgcacca ggaccgtgac
     6421 gagcgcgatt ttgaggcgcc cgtcgtctca ctctcgctcg gcgacacctg cgtatttcgg
     6481 gtcggcggga cgacccgcaa agatccaacc cgcacgctgc atctcgcctc cggcgacgcc
     6541 atcgtgctcg gcgggaaggc gcggttggcg tttcacggcg tcgaccggat cttgccgcgg
     6601 acctcgacgc tgttggccga aggtggacgg atcaatctca cgctgcggcg ggtatccgcg
     6661 cccggcgaac atcaggctcg atgacccgct tgccgctacg catcgtcgac cggcgtgatc
     6721 cagccgattc ccgctccccc cggctcttgg agaatcgcga tgcgtcccac atcgggaacc
     6781 tcgaacggct ctcgcatcac tttggcgccg gcggccttgg ctgcttcgat gcgcgcgtca
     6841 acatcatcga cggcgaggta cgacatccac ccttccggta cgccctcgaa ctccggcccg
     6901 ctcaacggga aaattcccgc gaccggtttg tcatccattt tcgccagcca ataggtgcca
     6961 ttcgccatcg gcattggctc gaaggtccag ccgatcgaag agctatagaa tcgcttcgcc
     7021 tgctccacgt cgcgtgtcat caactcattc caatagaagc tgccatggga ccacattcat
     7081 gttctccgta tccaccaagt tccccgatct ccagtcgatc tccgcagccc gggccgatca
     7141 cggttatgcg aacagccgcg cgctgacgct gtattccgcc attcaagcgc agtagtatga
     7201 caagcgccat ggttccaaag atcatcctca tcctgctcgc gctcgccggg ggcgccat
//
LOCUS       DATCWM010000200         3000 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_379545, whole genome shotgun sequence.
ACCESSION   DATCWM010000200 DATCWM010000000
VERSION     DATCWM010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3000
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_379545"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..615)
                     /locus_tag="VIQ50_03855"
     CDS             complement(<1..615)
                     /locus_tag="VIQ50_03855"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008967395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEY9359543.1"
                     /translation="MLCTKQKVFRRFWYATVPIDMLADGPKPFTLLGEKIVMFLDGEG
                     KPAALADRCCHRTAKLSKGWSNAGHITCGYHGWTYDRAGKLVRIPQLSPDQPLPDARV
                     RAFHCEARYGYAWVALEDPLLPIPDLPQDRDPSYRRIHQFYDRWNTAPLRMMENSFDN
                     AHFSFVHKSTFGQLNQPKPEKYELVETDYGFQAETIVPINNPPAA"
     gene            complement(729..1499)
                     /locus_tag="VIQ50_03860"
     CDS             complement(729..1499)
                     /locus_tag="VIQ50_03860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012041545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9359544.1"
                     /translation="MTIAAPLAVGVIMVAIWEIACRAFNIPVFLFPKPSDVGAKLVSD
                     WPALLAALGMTLRIALQAFVAAIVIGTLIAFLFVQSRAIEMSFFPYAVLLQVTPIVAI
                     APLIIILVKNTQVALTVCAAVVALFPIISNTTLGLRSVDPGLVNLFRMSRAGRMQTLW
                     RLRIPSALPYFFGGLRISSGLALIGAVVAEFVAGTGGRSAGLAYEILQSGFQLDIPRM
                     FAALFLITLAGVGLFTVMVGLSKLALGTWHESEVGIES"
     gene            complement(1544..2377)
                     /locus_tag="VIQ50_03865"
     CDS             complement(1544..2377)
                     /locus_tag="VIQ50_03865"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012041546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9359545.1"
                     /translation="MLAPNTALSVDADERVGAGAPVIEILSADKVFPDGTRALAAIDL
                     TIAGGEFLTLIGPSGCGKSTLLKLIANLIEPTDGRILWWSGAFEKLGARGRSIAFVFQ
                     DPTLMPWARVETNVRLPLDLARVPAAESRRRVADALARVGLEGFARYYPRQLSGGMKM
                     RVSIARSLVVEPNLLLMDEPFGALDEFTRNRLDADLVRLWWERKLTTVFVTHSIYEAV
                     FLSTRVIVMGARPGRICKVMTIDEPHPREESFRNSPRFAEHCRALSALLAEVSVEQMH
                     S"
     gene            complement(2384..>3000)
                     /locus_tag="VIQ50_03870"
     CDS             complement(2384..>3000)
                     /locus_tag="VIQ50_03870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008967391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359546.1"
                     /translation="LGDLKDKTILVATAGRTTWWPWLKAKFKYSDEQTKPYTFNLQPF
                     FADKNVVQQSYPSSEPYQAKLQGVPVKFFLFARDGYPPYGTTMVTTRGFVDRSPDVTA
                     RFVKASLEGWKSYMADPAPGNALIKADNPKMSDEQIAFGIEQLKALKALDGGDAQTMG
                     IGIMTQARWNATYDFMVSAGLLKPEVDWKQGFTDRFVKTLKLSM"
BASE COUNT          553 a          922 c          996 g          529 t
ORIGIN      
        1 ggcggccggc ggattgttga tgggaacgat cgtctcggcc tggaagccat aatcggtttc
       61 cacgagctcg tacttctcag gcttgggttg attgagctgc ccgaaagtcg atttgtgcac
      121 gaaggaaaag tgcgcattgt cgaacgaatt ttccatcatc cgcagcggtg cggtgttcca
      181 acgatcgtag aattggtgga tgcgccggta ggacgggtcg cggtcctgcg gcaggtcggg
      241 gatcggcagc aacgggtcct cgagcgcgac ccacgcgtat ccgtagcggg cttcgcaatg
      301 gaaagcccgc acccgcgcgt cgggcagcgg ttggtcgggt gaaagctgcg ggatgcgcac
      361 gagcttgccg gcgcggtcat aggtccagcc gtgatagccg cacgtgatat ggccggcgtt
      421 gctccagcct ttcgacagtt tggcagtgcg atggcagcag cgatcggcaa gcgccgccgg
      481 ctttccctcg ccgtccagga acatgacgat tttctcgccg aggagcgtga acggctttgg
      541 tccgtccgcg agcatgtcga tgggcacggt cgcgtaccag aaacggcgaa agaccttttg
      601 cttggtgcag agcatgagac acttcctccg gtcgttatga tgcgagctgc gccacgatgc
      661 gcgccgcctc gtggcgcatc tgcgcgaaat cgatgccggg cattgcgccg tgcggatgag
      721 gatcgacgtc atgattcgat gccgacttcg ctctcatgcc aggtgccgag cgccagcttg
      781 gacaggccca ccatcacggt gaacagaccc acgccggcga gcgtgatgag aaacagcgcg
      841 gcaaacatgc gcggaatgtc gagctggaac cccgattgca ggatttcata agcaagcccc
      901 gcgcttcgcc ctcccgtgcc ggcgacgaac tcggccacca cggcaccgat caacgcaagt
      961 ccgctggaga ttcgcaatcc gccgaagaag tacggcagcg cgctcggaat gcgcagccgc
     1021 cacagcgtct gcatccgtcc cgcccggctc atgcggaaga ggttcaccag cccgggatcg
     1081 acgctacgca atcccagtgt ggtgttggag atgatcggga acaacgccac caccgccgcg
     1141 cagacggtca acgcgacttg cgtgttcttg accaggataa tgatcaacgg cgcaatcgcc
     1201 acgatcggcg tcacctgcag caggaccgcg taggggaaga agctcatctc gattgcccgg
     1261 ctctgcacga acagaaaggc gatgagagtg ccgatcacga tcgccgcgac gaacgcctga
     1321 agcgcgatgc gcagcgtcat gcccagcgcc gccagcagcg cgggccagtc gctgacgagc
     1381 tttgcgccga cgtcgctcgg cttggggaag agaaagaccg ggatgttgaa ggcgcggcaa
     1441 gcgatctccc agatcgcgac catgatcacg ccgaccgcca agggcgcggc gatggtcatg
     1501 aagctttcgg actgggcgag cggacgcacc gcggatgtgt ctcctatgaa tgcatctgtt
     1561 ccaccgagac ttcggcgagc agcgcggaga gcgctcggca atgctcggcg aagcgcggag
     1621 agttgcggaa gctttcctcg cgcgggtgcg gctcgtcgat cgtcattacc ttgcagatgc
     1681 ggccgggccg cgcccccatg acgatcacgc gcgtcgacag gaacaccgcc tcgtagatgg
     1741 agtgggtgac gaatacggtt gtcagcttgc gttcccacca cagccgaacg aggtcggcgt
     1801 cgagccgatt gcgggtaaat tcgtcgagcg caccgaacgg ctcgtccatg aggagcaggt
     1861 tgggctcgac caccaggctg cgcgcgatcg acacccgcat tttcatgcct ccggagagct
     1921 gccgcgggta gtagcgggcg aatccttcga gccctactcg cgcgagcgcg tcggccacgc
     1981 ggcggcgcga ctcggccgcc ggcacgcggg cgagatcgag cggaaggcgc acgttcgtct
     2041 ccacgcgcgc ccacggcatc aaggtcgggt cctggaacac gaaggcgatc gatctgccgc
     2101 gcgcgccgag cttctcgaac gcgcccgacc accacaggat gcggccgtcg gtcggctcga
     2161 tcagattggc gatcagcttg agcagcgtgc tcttgccgca accggaagga ccaatcaggg
     2221 tgaggaattc gccgccggcg atcgtcagat cgatcgcggc gagcgcgcgg gtgccgtcgg
     2281 gaaagacctt gtccgcggag agaatctcga tcacgggcgc gcctgcgccg acgcgttcgt
     2341 ccgcgtccac ggacagcgcg gtattcggcg cgagcacgag cggctacatc gagagcttga
     2401 gcgtcttgac gaatcggtcg gtaaagccct gcttccaatc gacttcgggc ttcagcagcc
     2461 cggcggaaac catgaagtcg taggtcgcgt tccagcgcgc ttgcgtcatg attccgattc
     2521 ccatcgtctg cgcgtcgccg ccgtcgagtg ccttgagcgc cttgagctgc tcgatgccga
     2581 aggcgatctg ctcgtcgctc atcttcggat tgtcggcctt gatgagcgcg tttcccggcg
     2641 ccggatcggc catgtagctc ttccagcctt cgagcgatgc cttcacgaag cgcgcggtga
     2701 cgtccgggct ccggtcgacg aagccgcgcg tagtgaccat ggtcgtgccg tagggcggat
     2761 agccgtcgcg cgcgaacaga aagaacttga ccggcacgcc ctggagcttg gcctgatacg
     2821 gctcggacga cggataggac tgttgcacca cattcttgtc ggcgaagaag ggttgcaggt
     2881 tgaacgtgta gggcttggtc tgttcgtcgc tgtatttgaa tttcgccttg agccacggcc
     2941 accacgtggt gcggccggcg gttgccacca ggatcgtctt gtccttgagg tcgccaaggc
//
LOCUS       DATCWM010000201         7281 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_17976, whole genome shotgun sequence.
ACCESSION   DATCWM010000201 DATCWM010000000
VERSION     DATCWM010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7281)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7281)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7281
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17976"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            623..1828
                     /locus_tag="VIQ50_03875"
     CDS             623..1828
                     /locus_tag="VIQ50_03875"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEY9359547.1"
                     /translation="MRWLGSRHCPASWLAGLLATALMVPGAFAADVIKIGAPLALTGA
                     LADSGNKQKLGFDLWLERVKKAGGIKVGGATYQVELVTYDYQSDGKRAGELAEKLIND
                     DKVNFMTAPYGSGHTKVTAAVAERYGIPIIACASSEAVHDQGFKNLFGTLAPSSGLTD
                     AMLTKFKATKPDVTSIAILGREDVFPKLMADLMKTAAEKSGLKVVYSGYYPIGTVDHS
                     AALTAMRQVKPDWVFVTGYSQDLILARKQMADLGLKAPIVTMITGPVYKEFIDSLGPL
                     AENVTSATWWHWATPFKSDDVFGSTKEFYDAVVKATGGTEPDYVHASSAAALVVLQKA
                     IEKAGSLDPAAVRKALTELDTMTFFGPVKFREDGMNSSRALPLIQIQEGKPVLIYPNE
                     LSTTAMRLN"
     gene            1860..2687
                     /locus_tag="VIQ50_03880"
     CDS             1860..2687
                     /locus_tag="VIQ50_03880"
                     /inference="COORDINATES: protein motif:HMM:NF017532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HEY9359548.1"
                     /translation="MAGSLTQAQVEHFRREGYAFPFDAIPAAEAASYVAKLDGYDAIL
                     GEEAQKQLKIKAHVAAPWIVALARNKNILDAVESVIGPDILLFGTSMFSKKARDVRFV
                     SWHQDAAYYGLDPQQEVTCWVGLTDADTENGCMRVMPGSHLGADAVHDETYDPQNMLG
                     RGQTIRGIDDSKAVYMPVKAGQFSMHHERTIHGSMPNPSARRRVGISFFYMPTHVRST
                     IGRRTATLVRGTDKYGHWDPEPMPKTDLDPVCMEFLRQSWSRYRDPDVAQAAKLKAS"
     gene            2810..3709
                     /locus_tag="VIQ50_03885"
     CDS             2810..3709
                     /locus_tag="VIQ50_03885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9359549.1"
                     /translation="MRAIDEGPARRRPMIDLQVILNGVVLGGLYACVAVGFSLVWGVL
                     NVINLLHGSLIVLGAYLAYLAFTALGLHPFLSLPLVATLLLAFGYLLQRHVLNHVMTE
                     PVLVTLVLTFGLDLLLYNALVLGFTATPRRIVLDLGRIEIADVVLPVDRLAAMLLALA
                     LTGLLYCLLRGSRLGRAIVAVRMDRDAAILMGIRPRDVYAVTFGIGALMAGAAGCLIA
                     VVFPFSPGLAETLLGKSFVVCVLGGLGTVPGALAGGLALGLIESVFGVWLGPQNASII
                     AFAVLLLVLLVRPAGLVGRAGFE"
     gene            3709..4680
                     /locus_tag="VIQ50_03890"
     CDS             3709..4680
                     /locus_tag="VIQ50_03890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018064204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9359550.1"
                     /translation="MDRMPARDRIGFILVGLGAIAFALTPWIGGNYLVRFTTSTCLFI
                     TMALSWNFIGGYARYPSFATAAFFGLGAYAGAIAQTRGLAMPGAWLFAAVFTAIFAAS
                     LGSVILRLRGHYFAVGSFAIVEILRLGASSWHGLTGGGSGLNVPILPGGPDFASRVFL
                     YSMLALALVTFAAAIWVDRSSLGFGLRCIRQNESAASMLGIDVDRLKIIAFVLSATFV
                     GAGGAIYASWVSYIDPTDSFQILLTIKVPVMVLLGGAGTLFGPLIGVLAFQVLEERIW
                     SSFLEIHSGVLGLVIVVLVFCLPGGLLAVPYRDMIDRLSFLRRETVP"
     gene            4677..5432
                     /locus_tag="VIQ50_03895"
     CDS             4677..5432
                     /locus_tag="VIQ50_03895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015685087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9359551.1"
                     /translation="MTAILEVEGISRSFGGVRAVDGVTLQLLPGEIVGLIGPNGAGKT
                     TLVNLMTGVLRPSSGVVRFSGRDVTRQKPHQASQRGIARTFQIVQPFPEMTVLENVAA
                     GALFAAKAPSIAAAKAQARRHIDFAGLGALAEQRASALTLPDRKRLELAKSIAMNPRV
                     LLLDEVNAGLNSGEIDSALDLIRRISAQGVTILIIEHLMKVVFSLSHRILVLHHGALI
                     SEGTPDAVARDERVMQAYLGTRFAERQRRTGHG"
     gene            5425..6141
                     /locus_tag="VIQ50_03900"
     CDS             5425..6141
                     /locus_tag="VIQ50_03900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9359552.1"
                     /translation="MAEPLLSIRELQSGYGDVTVLWSIDLDVSEGEIACIVGSNGAGK
                     TTLLRTISGVVRASAGAITFAGRDVVGFEPDVILGAGIAHVPEGRRLFRGLSVRDNLL
                     LGAHLRHDRAGIARDLDFVFGVFPVLRERKLQDATTLSGGEQQMCALGRGIMSKPKLL
                     MIDELSLGLAPQAVERMSEALREINRAGITILLVEQDVATAFDLAHHAFVIEQGKVAI
                     HGEARALAADPKIRQAYMGI"
     gene            complement(6190..>7281)
                     /locus_tag="VIQ50_03905"
     CDS             complement(6190..>7281)
                     /locus_tag="VIQ50_03905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019905973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HEY9359553.1"
                     /translation="AVAIPGAPGKPAEVRLYDGDGDRFVATIIPFPGFEGSVSVAMGD
                     VDGDGLLDLVVGAGKDHAAEVVAYAGASIGGKGAFGTELARLQPFDAAARGGVSVAVA
                     QIDGTTSDNIIVGSPPGLPSEVKIYRSLLPLSAGAVPSLFASFKPYGEDRSGVSIATG
                     FVDFSTGRESIVTAPGPGSPSEVKVFAFPLLKPIDKNGESHTHAAATDQPVNTASFIP
                     FGNDYRGGVSLATGWLAGALGGAKRIIVSQLADKGSVKVFSSGSALDGGPSLYLQSPL
                     HHDHGANFREIAAFEPFNGSAGTRVATTSTTTGANLLVSGVAAGGADASVLKYEFVRP
                     NAQATTLQAVRLGQVWSGKASQPAMLGGD"
BASE COUNT         1174 a         2363 c         2387 g         1357 t
ORIGIN      
        1 gcctggtcga tcggggtcgt gaccttcgcc gccatgaggc ggcattcctc ggctttggcc
       61 cgaaactcgt cggatttggt catgggtagt gctcccgtac ctcgcccgta acgaggagag
      121 cagggagatg gttccccagt ggatgaacga acgttccgcg aacgacatcg gaaaaattgc
      181 cgggcgggca ccgcgcggtc gcgcgaggct ggcgacgagc ccgtcgcgac cgggccgccg
      241 gactgccatc ccgataggaa cgtcgccgct ggtcgcctgc ttcgccgcga ctgtcgtcaa
      301 cgtgaagaag gtgacgatga ggccgaccct tgagacgcac gaggttggtc gctgcgcgtc
      361 cgcggcgaga ggcgatgccg tagcagcgcc gacacccaag atgaactcgc gccgtcgcat
      421 tcgatcacct cgtcggcgtt gtccgcaaca ctgcggcacg cgcctcgccc agtggcagtt
      481 tcccaggctc gttttttaag ctgagaagat caaagcaggc agtcggtccg agcgctggac
      541 ggcgcagcga gcgcggacta ggcttcccgc gatgtctctg atgacggtcc cgactgttcg
      601 gcacgtccaa gggagtttgc gcatgcgatg gctcggcagc cggcactgtc cggcgtcatg
      661 gcttgcaggt cttctggcaa ccgcgctgat ggtccccggg gcgttcgcgg ctgacgtcat
      721 caaaatcggg gcgccgctcg cgctcaccgg cgcgcttgcg gattcgggca acaagcagaa
      781 gctcggcttc gatctctggc tcgagcgcgt caaaaaggcc ggtggcatca aagtcggcgg
      841 cgcgacctat caggtcgagc tcgtcaccta tgattatcag tccgacggca agcgcgccgg
      901 cgagctggcc gagaagctca tcaacgacga caaggtcaac ttcatgacgg cgccgtacgg
      961 ctctggtcac accaaggtga cggcggcggt cgcggaacgc tacggcatcc cgatcatcgc
     1021 gtgcgcgtcg tccgaggcgg tgcacgatca gggcttcaag aacctgttcg gtacgctcgc
     1081 gccatcgagc ggtctcactg atgcgatgct caccaaattc aaggccacca agcccgacgt
     1141 gacaagcatc gccatcctcg gccgcgagga cgtgtttccc aagctgatgg ccgacctgat
     1201 gaagaccgcg gcggagaaga gcggtctcaa ggtggtgtat tccggctact acccgatcgg
     1261 cacggtcgac cattcggcgg cgctgaccgc tatgcgccaa gtgaagcccg actgggtgtt
     1321 cgtcaccggc tactcgcagg acctgatctt ggcgcgcaag cagatggccg atctcgggct
     1381 caaggccccg atcgtcacca tgatcaccgg gcccgtttac aaggagttca tcgactcgct
     1441 agggccgctc gccgaaaacg tgaccagcgc gacttggtgg cattgggcga cgccgttcaa
     1501 aagcgacgac gtgttcggtt ccaccaagga gttctacgat gcggtcgtga aggcgaccgg
     1561 tggcaccgag ccggactatg ttcatgcctc ctcggcggcc gcccttgtcg tgttgcagaa
     1621 ggcgatcgag aaggctggct cgctcgaccc ggcagcggtg cgcaaggcgc tcaccgagct
     1681 cgacaccatg accttcttcg ggccggtcaa attccgcgag gacggcatga atagttcgcg
     1741 cgcgctgccg ctcattcaga tccaggaggg caagcccgtg ctgatctatc ccaacgagct
     1801 gagcaccacc gctatgcgtt tgaactgaaa ggatcgcacg cacatcaaag gaggggccga
     1861 tggccggaag cctgacccag gcgcaagtcg agcatttccg tcgcgaaggc tatgcatttc
     1921 cgttcgacgc cattccggcc gcagaggcgg cgagctacgt ggcaaagctc gacggctacg
     1981 acgcgatcct cggcgaggag gcgcagaagc agctcaagat caaggcgcac gtggcggcac
     2041 cgtggatcgt cgcgctggcg cgcaataaga acatcctcga tgcggtcgag tcggtgatcg
     2101 ggcccgacat cctgctgttc ggcacctcga tgttctccaa gaaagcgcgc gacgtccgct
     2161 tcgtgtcgtg gcatcaggac gccgcctatt atggcctcga tccgcagcag gaggtgacct
     2221 gctgggtcgg gttgaccgat gccgataccg agaacggctg catgcgggtg atgcccggtt
     2281 cgcatctggg cgccgacgcg gttcacgatg agacctacga tccgcagaac atgcttgggc
     2341 gcggccagac catccgcggc atcgacgaca gcaaggccgt ctacatgccg gtcaaggccg
     2401 gccagttctc catgcaccac gaacgcacga ttcacggctc gatgcccaat ccgtccgccc
     2461 gccgccgggt cggcatctcg ttcttctata tgccgaccca tgtgcgctcg accatcggcc
     2521 ggcgcaccgc gactctcgtg cgcggcaccg acaaatacgg gcactgggat cctgagccga
     2581 tgcccaagac cgatctcgac ccggtgtgca tggaattcct gcgccaaagc tggtcgcgct
     2641 atcgcgatcc ggacgtggcg caggccgcca agctgaaggc atcgtgaagt cggcgccgga
     2701 gtggcggctg catccggatg gagggtagtg aaatccggga tcgacgcagg cgcctggcgc
     2761 ggcggtttcg cattgcgctt ccctctatgc ggacttcggg cctcactcca tgcgggctat
     2821 cgacgaaggc cctgcccgcc gccggcccat gatcgacctg caggtcattc tcaacggcgt
     2881 agtgctgggc gggctctatg cctgcgttgc ggtcgggttc agcctggtct ggggcgtgct
     2941 caacgtcatc aacctgctgc acggatcgct gatcgtcctc ggcgcatact tggcctatct
     3001 ggcgttcacc gcgctcggcc tgcatccgtt cctgagtctg cccctggtgg cgacgctcct
     3061 gctcgccttc ggctatctgc tgcagcgtca cgtactcaat cacgtgatga ccgagccggt
     3121 gctggtgacg ctcgtgctca ccttcggcct cgatctccta ctttataacg ctctggtgct
     3181 gggcttcacc gccacgccgc ggcgcatcgt gctcgatctc ggccgcatcg agatcgccga
     3241 cgtggtcctg ccagtcgatc gcctcgcggc catgctgctc gcgctcgcgc tcaccgggct
     3301 gctctattgc ctgctgcgtg gctcgcgtct gggccgcgcc atcgtggcgg tgcgcatgga
     3361 ccgtgacgcc gcgatcctga tgggcatccg gccgcgcgat gtctacgctg tgacgttcgg
     3421 gatcggtgcc ctgatggcgg gcgcggccgg gtgcctgatt gccgtggtgt ttccgttctc
     3481 gccgggtctc gccgagacgc tgctgggaaa atcgttcgtg gtgtgcgtgc tcggcgggct
     3541 cggcacggtg cccggcgcgc ttgcgggcgg gctcgcactc ggactcatcg aaagtgtgtt
     3601 cggcgtctgg ctcgggccgc agaacgccag catcatcgcc tttgctgtac tgctgctggt
     3661 gctgctggtg cgccctgccg gactcgtcgg ccgcgcggga tttgaatgat ggatcgcatg
     3721 cccgcccgcg accggatcgg gttcattctc gtcggattgg gcgctattgc gttcgcgctc
     3781 accccgtgga tcggcggcaa ctatctggtc cgcttcacca ccagcacctg tttattcatc
     3841 accatggcgc tgtcgtggaa cttcatcggc ggctacgcgc gctatccctc tttcgcgacc
     3901 gcggcattct tcggcctcgg cgcctatgcg ggcgccatcg cgcagacgcg cgggctggcg
     3961 atgccgggcg cgtggctgtt tgcagccgtg ttcactgcaa tcttcgcggc atccctcggc
     4021 tctgtcatcc tgcggctgcg cggccactat ttcgcggtgg ggtcgttcgc gatcgtggaa
     4081 atcctcagac tgggtgcgtc gagctggcat ggactgaccg gcggcggctc cggtcttaac
     4141 gtgccgatcc tgcccggcgg tccggatttt gcgagccgcg tattcctcta ttctatgctg
     4201 gcgctcgccc tcgtcacatt cgcggcggcc atctgggtcg accggtcgag cctcggcttc
     4261 ggcctgcgtt gcatccggca gaacgagagc gccgccagca tgctgggcat cgatgtggac
     4321 cggctgaaga tcatcgcctt cgtgctctcg gcgaccttcg tgggcgcagg cggggcgatc
     4381 tacgcctcgt gggtgtccta catcgatccg accgattcct tccagattct gctcaccatc
     4441 aaggtgcccg tcatggtgct gctcggcggc gccggcacat tgtttggtcc gctgatcggg
     4501 gtgttggcct tccaggtgct ggaggagcgc atctggtcga gctttctgga gattcacagc
     4561 ggcgtgctcg gtctggtcat cgttgtcctc gtgttctgtc tgccgggtgg gctgctggcg
     4621 gtgccgtatc gcgacatgat tgatcgcttg agtttcttgc gtcgcgagac ggtgccatga
     4681 cggcgatcct cgaagtggag gggatttcgc gctccttcgg cggcgtgcgc gccgtcgacg
     4741 gcgtgacgct gcagctcttg cccggcgaga tcgttggcct gatcggcccc aacggcgctg
     4801 gtaagacgac gctcgtcaat ctcatgaccg gcgtgctgcg gccaagctcc ggcgtggtgc
     4861 gcttttccgg ccgcgacgtg acccgccaga agccgcacca ggcctcccag cgcggcatcg
     4921 cgcgcacgtt ccagatcgtg cagccctttc ccgagatgac ggtgctggaa aacgtcgcgg
     4981 ccggcgcgct atttgccgcg aaggcgccga gcatcgcggc cgcgaaagcg caagcgcgcc
     5041 ggcacatcga ctttgccggc ctcggcgcgc tcgccgagca acgggcgagc gccctgacat
     5101 tgccggatcg caagcgcctc gagcttgcca agagcatcgc catgaacccg cgcgtcctgc
     5161 tgctcgacga ggtgaatgcc gggctcaatt ccggcgaaat cgactcggcg ctcgacctga
     5221 tccgccgcat ttccgcgcaa ggcgtgacta tcctgatcat cgagcatctg atgaaggtgg
     5281 tgttctccct ctcccaccgc atcttggtgc tgcaccatgg cgccctgatc agcgagggca
     5341 cgcccgacgc agtggcgcgc gacgagcggg tgatgcaggc ctatctcggg accaggtttg
     5401 cagagcgaca gcgcaggacg gggcatggct gaaccgctgc tgagcattcg cgagctgcaa
     5461 tccggatacg gcgacgtcac cgtcctgtgg agcattgatc ttgatgtgag cgagggcgag
     5521 atcgcctgca tcgtcggctc caacggggcg ggcaagacca cgctcttgcg cacgatctcc
     5581 ggcgtggtgc gcgcgagcgc cggcgccatc acgttcgcgg gccgggatgt cgtgggcttc
     5641 gagccggatg tcattctcgg tgccggcatc gcccacgttc ccgaggggcg gcggctgttc
     5701 cgcggcctga gcgtgcgcga caacttactg ctcggcgccc atttgcgcca cgaccgcgcc
     5761 gggattgccc gcgacctcga tttcgtgttc ggcgtcttcc cggtgctgcg cgagcgaaag
     5821 ttgcaggacg ccaccacgct ctcgggcggg gaacagcaga tgtgcgcgct cggtcgcggc
     5881 atcatgtcga aaccgaaact gctgatgatt gacgagctgt cgctcgggct cgccccgcag
     5941 gcggtcgagc gcatgagcga ggcgctgcgc gagatcaacc gggcgggtat caccatcctg
     6001 ctggtggagc aggacgtggc gactgccttc gacctcgccc accacgcctt cgtgatcgag
     6061 caggggaaag tggcgatcca cggcgaagcg cgcgcgctcg ccgcggatcc gaagatccgg
     6121 caggcctata tggggatttg acttaaccgg ttatcggcaa tcccggcgac aatcggcagt
     6181 tccaatctgc taatcgccgc cgagcatggc gggctgcgag gcttttccgg accagacttg
     6241 tccgagacgc accgcttgca gcgtcgtcgc ctgagcattc ggcctgacga actcgtattt
     6301 gagaacgctt gcgtccgcgc cgccggccgc gacaccgctg accagcagat tggcgcccgt
     6361 cgtcgtgctg gtcgtggcga cccgtgtgcc ggcggatccg ttgaatggct cgaaggcggc
     6421 gatctcgcgg aagttcgcgc cgtggtcgtg gtgcagggga ctctgcagat agagtgacgg
     6481 gccgccgtcc agtgcggagc cgctcgagaa gaccttcacc gaacccttgt ccgcaagctg
     6541 actgacgatg atgcgcttgg cgcccccgag cgcgccggcg agccaacctg tcgccaggga
     6601 aacgccgccg cgataatcgt ttccgaacgg aatgaacgag gcggtgttca ccggttggtc
     6661 ggtcgcggct gcgtgcgtgt gactctcgcc atttttgtcg ataggcttca acagcgggaa
     6721 ggcgaacacc ttgacctcgc tcgggctgcc cgggccgggg gcggtgacga tgctctcgcg
     6781 ccccgtcgaa aaatctacga aacccgtggc gatgctcacc ccggaccggt cctcaccata
     6841 cggcttgaag ctcgcgaaca acgacggcac ggcgccagcc gataacggca gcagagatcg
     6901 atagatcttc acttcacttg ggaggccggg aggcgatccc acgatgatgt tgtcggacgt
     6961 ggtcccatcg atctgcgcaa cagcgacgct gacaccgcca cgcgcggcgg catcgaacgg
     7021 ctgcaagcgc gcgagctccg tcccgaaagc gcccttgccg ccgatggatg cgccggcata
     7081 ggcgacgact tccgccgcgt ggtccttgcc ggccccgacg actagatcaa gcaggccatc
     7141 accatcgaca tcccccatgg cgacgctgac gctgccttca aaaccgggaa acgggatgat
     7201 cgtggcgacg aaccggtcgc cgtcgccgtc gtagagacga acctcggcag gcttgccggg
     7261 cgcgcccggg atggccaccg c
//
LOCUS       DATCWM010000202         2773 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_530874, whole genome shotgun sequence.
ACCESSION   DATCWM010000202 DATCWM010000000
VERSION     DATCWM010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2773
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_530874"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..509
                     /gene="zapE"
                     /locus_tag="VIQ50_03910"
     CDS             <1..509
                     /gene="zapE"
                     /locus_tag="VIQ50_03910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cell division protein ZapE"
                     /protein_id="HEY9359554.1"
                     /translation="WYVPADAAAAAALDEAWRRLTAGHAGEPQTLAVKGHTVHVPRAT
                     MGVARFSFQDLCGEPLGAADYLKIAREYHTIVIDHVVAMDYDRRNEAKRFIILIDTLY
                     DNAVKLVASADAEPDALYRANEGFEAGEFKRTASRLIEMRSEAYLALSHGPGHAVASG
                     SMQGLVET"
     gene            638..1603
                     /gene="mdh"
                     /locus_tag="VIQ50_03915"
     CDS             638..1603
                     /gene="mdh"
                     /locus_tag="VIQ50_03915"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HEY9359555.1"
                     /translation="MPRPKIALIGAGQIGGTLAHLIGLKELGDVVLFDVAEGIPQGKA
                     LDLVQSSPVEGFDGHFTGTNSYDAIDGANVCIVTAGVPRKPGMSRDDLLGINLKVMEQ
                     VGAGIRKYAPAAFVICITNPLDAMVWALQKACGLPKHMVVGMAGVLDSARFRFFLADE
                     FNVSVEDVSAFVLGGHGDSMVPLIRYSTVAGIPLPDLVKMKWTTQARLDDIVQRTRDG
                     GAEIVNLLKSGSAYYAPAASAVAMAESFLKDKKRVLPCAAHLNGEYGIKNLYVGVPAV
                     IGAKGVERIVEIQLNGAERTMFEDSAEAVATLVEACKKIAPNLDK"
     gene            1704..>2773
                     /gene="sucC"
                     /locus_tag="VIQ50_03920"
     CDS             1704..>2773
                     /gene="sucC"
                     /locus_tag="VIQ50_03920"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HEY9359556.1"
                     /translation="MNIHEYQAKAVLREFGVPVPRGLPAFSVEEAVKAADDLDAPVLV
                     VKAQIHAGGRGKAGGVKVVKSKEEVRSEAGRLLGAVLVTHQTGPHGKEVCRLYIEEGS
                     AIDQEFYLSALVDRESSRIAFVVSTAGGMDIEEVARTRPEQIMTFAVDPATGIMPHHG
                     RRVARALGLNGDLAKQAERLVTQLYAAFIAKDMSLLEINPLVVTKGKELVCLDAKIGF
                     DDNALYRHPDIVALRDLTEEDEKEIEASKYDLNYVALDGTIGCMVNGAGLAMATMDII
                     KLYGEAPANFLDVGGGASKEKVAAAFKIITADPKVRGILVNIFGGIMKCDVIAEGVVA
                     AVKEVGLRVPLVVRLEGTNVELG"
BASE COUNT          516 a          849 c          915 g          493 t
ORIGIN      
        1 tttggtacgt tcccgccgat gctgcagcag cggccgctct cgacgaggcc tggcggcgtc
       61 tgaccgcggg tcacgccggc gaaccgcaga ccctggcggt taaggggcac accgtccacg
      121 taccgcgcgc aaccatggga gtcgcccgat tctcgtttca ggatttgtgc ggggaaccgc
      181 tcggcgcggc cgattatctc aagatcgcac gtgaatacca caccatcgtg atcgatcatg
      241 tggtggcgat ggattacgat cgacgcaacg aggccaagcg cttcatcatt ctcatcgaca
      301 cgctctatga caacgcggtc aagctcgttg cctcggcgga cgccgagccg gacgcgctct
      361 atcgcgccaa cgaggggttc gaggcgggcg agttcaagcg caccgcttcc cgtctgatcg
      421 agatgcgctc ggaggcttac ctcgcgttgt cgcacggtcc gggccatgcg gtcgcgtcgg
      481 gatcgatgca agggttggtg gagacgtgac gcgatcttcg ctcgcgcgcc gcggccatca
      541 atgcctctgc ggcgggcgac ttgaacggca gggcggaaac ggtctatgac cgatttcgcc
      601 cgcgttccgc cgacccgatc cgaggttttc cccgcgcatg ccacgtccca agattgccct
      661 gatcggtgcc ggccaaatcg gcggcacgct cgcccacctt atcggtctca aagagctcgg
      721 cgacgtggtg ctgttcgacg tcgccgaagg cattccccag ggcaaggcgc tcgacctggt
      781 gcagtcttcg ccggtcgagg ggttcgatgg acatttcacc gggaccaatt cctacgacgc
      841 catcgatggt gccaatgtct gcatcgtcac cgcaggggtg ccgcgcaagc cgggcatgag
      901 tcgcgacgat ctgctcggca tcaatctcaa ggtcatggag caggtgggag ccggcatcag
      961 gaagtacgcg ccggcggcat tcgtgatctg cattaccaac ccgctcgacg ccatggtatg
     1021 ggcgctgcaa aaggcgtgcg gcctgcccaa gcatatggtc gtcggcatgg ccggagtgct
     1081 cgacagcgcg cgcttccgat tctttcttgc cgacgagttc aacgtctcgg tcgaggacgt
     1141 gagcgccttc gtgctcggcg gtcacggcga cagcatggtg ccgctgatcc gctattcgac
     1201 ggttgccggc attcccttgc ccgatctcgt caaaatgaaa tggaccacgc aggcgcggct
     1261 cgatgacatc gttcaacgca cgcgcgacgg aggcgccgag atcgtcaact tgctaaagag
     1321 cggctcggct tactacgcac cggccgcatc ggcggtggcc atggcggaga gctttcttaa
     1381 ggacaagaaa cgcgtgctgc cctgtgcggc ccatctcaac ggcgagtacg gaatcaagaa
     1441 cctctatgtc ggggtgcccg ctgtgatcgg cgccaagggt gtcgagcgca tcgtcgagat
     1501 ccagttgaac ggcgccgaac ggaccatgtt cgaagattcg gccgaggccg ttgcaaccct
     1561 ggtcgaggct tgcaagaaga tcgcaccaaa tctggataag tgagggcgct catggcgcgg
     1621 gcgaagggcg gcgcgagacc cttgcgggtg ctatgtcgtc cacgcggcgc gagggcgctc
     1681 taggcgcgca gcagggggct cgcatgaaca tccacgaata ccaagccaag gcggtgctgc
     1741 gggaattcgg cgtgccggtg ccgcgcgggc tccccgcctt ttcggtcgaa gaggcggtca
     1801 aggccgcgga cgatctcgac gcgcccgtgc tcgtcgtcaa ggcgcagatc catgccggcg
     1861 gccgcggcaa ggccggcggc gtcaaagtgg tgaaatcgaa ggaagaggtg cgcagcgagg
     1921 ccgggcggct gctcggcgca gtgcttgtca cgcatcagac cggcccgcat gggaaagagg
     1981 tctgccgcct ctacatcgaa gagggctccg ccatcgatca ggagttctat ctctcggcgc
     2041 ttgtcgaccg cgaaagctcg cgcattgcct tcgtggtatc gacggcgggg ggcatggaca
     2101 tcgaagaggt cgcccgcacc cgtcccgagc agattatgac gtttgccgtc gatccggcga
     2161 ccggaattat gccgcaccac ggacggcgag tcgcgcgggc gctcgggctc aatggcgatc
     2221 tcgccaagca ggcggaaagg ctcgttactc agctctatgc cgccttcatc gccaaggata
     2281 tgagcctgct cgagatcaac cccctcgttg tcaccaaagg caaagagctc gtctgtctcg
     2341 atgccaagat cggcttcgat gacaacgcgc tttaccgtca tccggacatc gtggcgttgc
     2401 gcgatctcac ggaagaagac gagaaggaga tcgaggcttc caaatacgac ctcaactacg
     2461 tcgcgctcga cggcacgatc ggctgcatgg tcaacggcgc aggcctggcc atggcgacca
     2521 tggacatcat caagctctat ggcgaagcgc cggcgaactt cctggacgtc ggcgggggcg
     2581 cgagcaaaga gaaggttgcg gctgcgttca agatcatcac cgccgatccc aaagtgcggg
     2641 ggatcctggt caacattttc ggcggcatca tgaaatgcga cgtgatcgcc gagggcgtcg
     2701 tcgcggcggt gaaggaggtg ggcttgcgcg tgccgttggt ggtgcggctc gaaggcacca
     2761 acgtcgagct cgg
//
LOCUS       DATCWM010000203         5834 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_471418, whole genome shotgun sequence.
ACCESSION   DATCWM010000203 DATCWM010000000
VERSION     DATCWM010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5834)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5834)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5834
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_471418"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1197
                     /locus_tag="VIQ50_03925"
     CDS             <1..1197
                     /locus_tag="VIQ50_03925"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEY9359557.1"
                     /translation="VEYMANQPYETSAMYQPKVGRMHPDPEVVAEVVERLAAAKRPII
                     LGGRGVLRSGARDAVIRLADRCGALLSNTLPARGLFHDHPFGLGITGSYFTSLGREMY
                     ESADVVLAVGTSLSYYVGGGHFFPKSFKIQLDDAPRGLRDGQKAADIYVRSDALIGIE
                     AILAGLDKKLGVGKPTAAAIRTKELAHRIATEPADSMPFDIAPGVLDPREAIRAIDAV
                     VPKDWDIVVGGGHQAYFNSQMRGRPAERYTTVREFGAVGNGLSYALGVAAARRQGRDS
                     KVVLFEGDGGLFFNIQELETLKRQGYRILICAMNDGGYGSEFHKLRADGLDDSLAVFG
                     RPALEKIARGFDLRGHEIRDVSVIPKLFADFAAQGESEMWNIQISDQVTAPVIRQTIK
                     RGHGNM"
     gene            complement(1488..2537)
                     /locus_tag="VIQ50_03930"
     CDS             complement(1488..2537)
                     /locus_tag="VIQ50_03930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018409053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HEY9359558.1"
                     /translation="MQIRVVDIAKEFGRTGALRGVNLDIRDGELIALLGPSGSGKTTL
                     LRVIAGLEAPSAGKVYFDGEDATAVPVQRRRIGFVFQNYALFKHMSVADNIAYGLRVL
                     PRGERPKRTAIIKRVQELLDLMELPDIGGRFPRQLSGGQQQRIALARALAVDPRVLLL
                     DEPFGALDAKVRKGLRRWLRELHDRTGHTTVFVTHDQEEALELADRVAVLNAGLLEQV
                     GSADDVYDRPASAFVMAFVGDTGSIPVECGDDGLRHEGRRFAASFSGSCHGAARLYVR
                     PKDIDVVAPADCLLRGRVLSVRRTATGRRAQVAIGSGDAVLESELLLGKDIQVGTEVG
                     VMVRQGRVFPAAMSG"
     gene            complement(2552..3355)
                     /gene="cysW"
                     /locus_tag="VIQ50_03935"
     CDS             complement(2552..3355)
                     /gene="cysW"
                     /locus_tag="VIQ50_03935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020092433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysW"
                     /protein_id="HEY9359559.1"
                     /translation="MIRALLIGLALVFMALMLILPVVVVFTEALRKGVSIYFAAFSDP
                     DALAAIQLTLMVAAISVPLNTIFGIAASWAIAKFEFNGKSLLITLIDLPFSISPVVSG
                     LIYVLLFGAQGVFGPWLKAHGIEIIFALPGIVLATVFVTFPFVARELIPLMQEQGNTD
                     EEAALTLGASGWRAFLTVTLPNIRWGLLYGVLLCNARAMGEFGAVSVVSGHIRGVTDT
                     MPLHVEILYNEYNFAAAFAMASLLTLLALVTLAGKALLETRYGGELAQR"
     gene            complement(3405..4235)
                     /gene="cysT"
                     /locus_tag="VIQ50_03940"
     CDS             complement(3405..4235)
                     /gene="cysT"
                     /locus_tag="VIQ50_03940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012385231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysT"
                     /protein_id="HEY9359560.1"
                     /translation="MRLKQPSPLPGFELALGYTLFYLCLIVLLPLAALVAEAAGLGLR
                     GIWQVASEPRVMAALRTSFGLSLAAAVTDCAFGLLIAWVLTRYSFPGRRLLDAAVDLP
                     FALPTAVAGISLATLYAPNGWIGGVLASLDIKVAFTPLGIFVALIFVALPFAVRTVQP
                     IIGEIDRSLEEASATLGANRFQTVRRVVIPMLTPALLTGLALAFARSVSEYGSVIFIA
                     GNLPFVSEIAPVLIVIKLEEFNYPGATAIAVIMLAIAFLMLLAINLTQAWSRRRFGHV
                     "
     gene            complement(4265..5281)
                     /locus_tag="VIQ50_03945"
     CDS             complement(4265..5281)
                     /locus_tag="VIQ50_03945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003564039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEY9359561.1"
                     /translation="MRRLAPLVAATLYAIGSIASASTAYAQTTLLNVSYDPTRELYRD
                     INTMFVADWKQKTGDGIVIRMSHGGSGAQARAVIAGLDASVVTLALAADIDAIAERAG
                     KVPADWQSRLPDNSSPYTSTIVFLVRKGNPKHINDWDDLVRPGIQVVTPNPKTSGGAR
                     WNYLAAWAYAAEKNSEVDKIEAFMTALFRNVSVLDTGARAATTTFARRGIGDVLIAWE
                     NEAHLVLQEIGAGQFDIVTPSLSILAQPTVTWVDGNLDTAPKQNAAKAYLEFLYTPQA
                     QAAIAKHFYRPVAPQYATKQDLARFPQLKLVTIRDFGGWAEAQKQHFADGGKFDQIMA
                     IAHR"
     gene            complement(5596..>5834)
                     /locus_tag="VIQ50_03950"
     CDS             complement(5596..>5834)
                     /locus_tag="VIQ50_03950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013947193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEY9359562.1"
                     /translation="VLFGGWHLPAILPQSDSLHTLLWDAHFYLAFAFFALILLHVAAA
                     LFHALVRRDGVFETMASAAIYDDVAPAEQGRHAV"
BASE COUNT         1160 a         1822 c         1854 g          998 t
ORIGIN      
        1 gtcgaataca tggccaacca gccctacgag acctcggcga tgtatcagcc aaaggtcggg
       61 cgcatgcacc ccgatcccga ggtcgtggcc gaggttgtcg agcggctggc tgcggccaag
      121 cggccgatca tcctcggtgg ccgtggcgtg ctgcggtcag gcgcgcgaga tgcggtgatc
      181 aggctcgccg atcgctgcgg cgcgttgctc tccaacacgc tgcccgcgcg cggtctcttc
      241 cacgaccatc cgttcgggct cggcatcacc ggcagctact tcacgtcgct gggccgggag
      301 atgtacgagt ccgcggacgt cgtgctcgcg gttggcacga gcctgtccta ctacgtcggt
      361 ggcgggcact tcttcccaaa atccttcaag atccagttgg acgatgcgcc tcgcggcttg
      421 cgcgacgggc agaaggccgc cgacatctac gtcagatcgg atgcgctcat tggcatcgag
      481 gcgatcctcg ccggcctcga caagaagttg ggcgttggca agccgacggc ggcggccata
      541 cgcacgaaag agctggcgca ccgcatcgcg accgagccag cggactcgat gccgttcgac
      601 atcgcgcccg gggtgctgga cccacgcgag gccatccgag ctatcgacgc ggtcgttcca
      661 aaggactggg acatcgtcgt cggcggcggc catcaggcct atttcaacag ccagatgcgt
      721 ggcaggccgg cggagcgcta cacgacggtc cgtgaattcg gcgcggtcgg caacggcctg
      781 tcgtatgcac tcggagttgc ggctgcgcgc cggcagggcc gcgacagcaa ggtcgtgctg
      841 ttcgaaggcg acggtgggct cttcttcaat atccaggagc tcgagactct caagcgccaa
      901 ggataccgca tcctgatctg cgcgatgaac gacggcggat acggttcgga gtttcacaag
      961 ctgcgtgccg acggcctcga cgatagcttg gctgtgttcg gccggcccgc gctcgaaaaa
     1021 atcgcgcgcg gcttcgacct gcgcggccac gagatccgcg atgtgtcggt aatcccgaag
     1081 ctgttcgccg acttcgccgc gcagggcgaa agcgaaatgt ggaacatcca aatctccgac
     1141 caggtcacgg cgcctgtgat ccgccagacc atcaagcgcg ggcacggcaa tatgtgagca
     1201 tttcgattag tcggccttgt tggtcgcatg aggagatgct ggatagagcg ctgccctcaa
     1261 ggcagaggtc gtgagttcga atttcgccgg gcgcgccggt tcgctacaaa actgggcatt
     1321 tccaaaacct gccgtttttt tgcgctcgag gcggcgacga gcgtgcgcgg ccatgtgctt
     1381 ttgaagccca tgatgcgaac ctctttcgcg tcgacttcga cgcgctgggc gagcgctgcc
     1441 gtgtataacg gacaagtgag cggacatggc aactgacgtg aatgatccta cccggacatc
     1501 gcggccggaa atacgcggcc ctgccgtacc atcaccccaa cctccgtgcc gacttggata
     1561 tccttgccca gtagcaactc agattcgagc accgcgtcgc ctgatccgat tgcgacctgt
     1621 gctctgcgtc ccgtagccgt tcgacgaacg ctgagcacgc ggccgcgcaa gaggcaatca
     1681 gccggggcga ccacatcgat gtcctttgga cgcacgtaaa ggcgggccgc gccgtggcag
     1741 gacccgctga acgacgccgc aaaccgccgc ccctcgtgcc gaagtccgtc gtctccgcat
     1801 tcaaccggta tgctgcccgt atcccccacg aacgccatca cgaaggcgga agccgggcgg
     1861 tcgtacacgt cgtccgccga gccgacctgc tccagcaggc cggcgttgag gaccgcgacg
     1921 cggtccgcaa gttcgagcgc ctcctcctgg tcgtgcgtca cgaaaacggt cgtatgtccg
     1981 gtgcggtcgt gcaactcgcg cagccaccgg cgcaggccct tgcgcacttt ggcgtcgagc
     2041 gcgccgaagg gctcgtcgag cagcagcaca cgcggatcca ccgcaagcgc acgtgcaaga
     2101 gctatgcgtt gctgctggcc accggacagc tgccgcggga agcgaccgcc aatgtccggg
     2161 agttccatga ggtcgagcag ctcttgcacg cgtttgatga tggctgtccg cttcggccgt
     2221 tcaccacgcg gaaggacccg taggccgtaa gcgatattgt ccgcaaccga catgtgcttg
     2281 aacagggcat agttctggaa tacgaacccg atgcgccgcc tctgcacggg taccgcggtt
     2341 gcgtcctcgc cgtcgaaata gaccttgcct gcgctcggcg cttcgaggcc ggcgatgacg
     2401 cgcagcagcg tcgtctttcc ggagcccgag gggccgagca gcgcgatcaa ctcgccgtcg
     2461 cggatgtcga gattcacccc acgcagcgcg ccggtgcggc cgaattcctt agcgatatcg
     2521 acgacacgaa tctgcaaacg acgccccatc actatctctg cgccagctcc ccgccatagc
     2581 gcgtttcgag caaggccttg cccgcgagcg tgaccagcgc aagcagcgtg agtagtgatg
     2641 ccatcgcgaa ggccgctgcg aaattatatt cgttgtacag aatctcgaca tgcagcggca
     2701 tcgtgtcggt gacgccgcgg atatgccccg acacgaccga gacggcgccg aactcgccca
     2761 tggcgcgtgc attgcacaag agcacgccat agagcaggcc ccaacgaatg ttcggcaagg
     2821 tgacggtaag gaaggcgcgc cagccgctcg caccaagcgt tagcgctgct tcttcgtccg
     2881 tgttgccctg ctcctgcatc agcgggatga gttcgcgggc aacgaagggg aatgtgacga
     2941 agaccgtcgc cagcacgatt cccggcaatg caaagatgat ctcgattccg tgcgccttga
     3001 gccacggccc gaatacgccc tgcgctccga acagcagcac gtagatcagg cctgagacga
     3061 cgggcgagat ggagaatggc aggtcgatca gcgtgatcag cagactcttg ccattgaact
     3121 cgaatttggc gattgcccat gaagccgcga tgccgaaaat cgtgttcagc ggaaccgaga
     3181 tcgccgcaac catcaaggta agctggatcg cggcgagcgc atcgggatcg ctgaatgcgg
     3241 cgaaatagat ggagacacct ttgcgcaacg cctcggtgaa cacgacgacg accggcagaa
     3301 tcagcatcaa tgccatgaaa acgagcgcga ggccgatcag aagcgcacgg atcatcgccc
     3361 gctcggtggt gaccggcggt ggggacaagc ccttccggct gcgctcaaac atgcccgaac
     3421 ctgcgcctgc tccaggcctg ggtcagattg atggcaagca gcatgagaaa ggcaatcgcc
     3481 agcatgatga ccgcaatcgc ggttgcgccc ggatagttga attcttcgag cttgataacg
     3541 atgaggaccg gcgcaatctc cgagacaaag ggcagattgc cggcgatgaa gatcaccgac
     3601 ccgtattcgc tcacagagcg cgcgaaggcg agcgcaaggc cggtcagcag cgcgggcgtc
     3661 agcatgggaa tgacaacgcg gcggacggtc tggaagcgat tggcgccgag cgtcgcggat
     3721 gcctcttcta ggctgcggtc gatctcgccg atgatcggct gtaccgttct gaccgcgaac
     3781 ggcaaggcga cgaagataag cgcaacaaaa atcccgagcg gcgtgaatgc taccttgatg
     3841 tcaaggctgg cgagcacgcc gccgatccaa ccgttcggcg catacagggt cgccagcgag
     3901 atcccggcga cggcggtcgg cagcgcgaaa ggcagatcga ccgcggcgtc cagcaaccgg
     3961 cggcccggaa agctgtagcg tgtaaggacc caggcgatca gcagtccgaa ggcgcagtcg
     4021 gtgacagccg ccgccaacga gagcccgaag ctcgtacgca gcgcggccat cacccgcggc
     4081 tcgctcgcca cctgccaaat cccgcgcaac ccgagcccgg ccgcctccgc gaccagcgcg
     4141 gctaggggca gcagcacgat gaggcagaga tagaagagtg tgtagcccag cgcgagctcg
     4201 aagcccggca gcggacttgg ttgcttgagc cgcacgaccg ttgccccgtt gcgcctgttg
     4261 agccctatcg gtgcgctatg gccatgatct gatcgaattt gccgccgtca gcaaagtgct
     4321 gcttttgtgc ttcggcccaa ccgccgaagt ccctgatggt caccagtttc aactgcggaa
     4381 accgggccaa gtcttgcttt gtcgcgtatt gcggcgccac cgggcggtaa aaatgcttcg
     4441 cgatcgccgc ctgcgcttgc ggtgtgtaca ggaattcgag ataggccttg gcggcgttct
     4501 gctttggcgc cgtgtcgaga ttgccatcga cccaggtgac ggtcggctga gcgaggatcg
     4561 acaaagacgg ggtcacaatg tcgaactggc cagcgccgat ctcctgcaac acaagatgcg
     4621 cctcgttctc ccacgcgatc agcacgtcgc cgatgccacg tcgcgcgaaa gtcgtcgtcg
     4681 cagcgcgcgc gccggtgtcg agcaccgaga cgttcctgaa cagcgccgtc atgaacgcct
     4741 cgattttgtc gacctcgctg ttcttctccg ccgcataggc ccaagcggcc aaatagttcc
     4801 agcgcgcacc gcccgaggtc ttcggattag gcgtgacgac ctgtatgccg ggccgcacta
     4861 ggtcatccca gtcgttgatg tgcttggggt tccccttgcg gacgaggaag acaatcgtcg
     4921 aggtgtaggg agaagaattg tcgggcagcc gcgattgcca gtcggcgggg accttaccgg
     4981 ctctttccgc gatggcgtcg atgtccgccg cgagtgccag ggtcaccacg gacgcgtcga
     5041 gacccgctat gacagcgcgc gcctgcgcgc ccgagccgcc gtgcgacatg cggatgacga
     5101 tcccatcgcc tgtcttttgc ttccagtccg cgacgaacat ggtgttgatg tcacggtaca
     5161 gttcccgagt aggatcgtag gaaacattga gcaatgtcgt ctgtgcatac gctgtcgatg
     5221 cggatgcgat tgatccgatt gcatagagag tagcggcgac gagcggagca aggcggcgca
     5281 cggcggaact ccatcatgga catccagcaa aagtaggtta atgcccgggg aacgtgttag
     5341 ttacaatgcc ggcgcattgc tatttttggc acggagccaa taggaacctc cctcgccgcc
     5401 tgattgcgaa gaaagattct tctcagagcg cgccgacatc gaagaacgcg gtcagatgac
     5461 cgctctggcc catcacgtca atcacgggcg ttgatcgaga gggtcgctat cggagggtaa
     5521 ccgggcccct cgcgaaattg agggccagcc tgcgaggcgt tagtgcaaag tcgcagggtg
     5581 tcgcaaattt tgccgctaga ccgcgtggcg tccttgctcg gcgggcgcga cgtcgtcgta
     5641 gatcgccgcg gacgccattg tctcgaacac gccgtcgcgc cgcacgagtg catgaaacag
     5701 cgccgccgcg acatgcaaca ggatcagcgc gaagaacgcg aaagcaagat agaaatgcgc
     5761 gtcccaaagg agcgtatgca ggctgtcgct ctgcggcagg atcgcgggaa gatgccagcc
     5821 gccgaacaac acga
//
LOCUS       DATCWM010000204         2054 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_352678, whole genome shotgun sequence.
ACCESSION   DATCWM010000204 DATCWM010000000
VERSION     DATCWM010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_352678"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1664
                     /locus_tag="VIQ50_03955"
     CDS             <1..1664
                     /locus_tag="VIQ50_03955"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9359563.1"
                     /translation="ADDVFVAKNQQMVYWVTAAIVVVTVIKAIAEYIGDVTVNYLGNR
                     FIADLRIQMFGKLARADLSFIQTVHSGRLLSGFLNDATLIRATASRSMVTLGENYLKV
                     IILVATMFYMDARFSVLILIFMPIAWFMLSRQRRKMRKSTSKSLQETGDLSALITQTL
                     RGMRIVRAYRQEDREEARAATAINRALEFTMRGTRARALSSPSIELLTGLGFALAIYF
                     AGTKGVHGDLTLGHFMGFMTAALLIYTPLKSAATLQTQLQEGMAAASRVFGIIDLQVH
                     LAEVPDAEPLKLERGEIEFANVSFAYEKENPVLRSVSLTVPPGRTVALVGPSGSGKST
                     LVNLALRFFDPDRGRVMIDSQDIATVKIDSLRDSIALVTQDPVLFDDTIRANIAYGTK
                     PADEAQVIAAAKAAAAHDFIMALPKGYDTRVGEAGGLLSGGERQRIAIARAIYKDAPI
                     LLLDEPTSSLDSEAEAKVQAALEELMRGRTVLMIAHRLSTVKKADLICVLDQGRIIEI
                     GRHDELVAKGGLYTKLHRTQFGIAGGYAAPPPENQGQEAVAVAGK"
     gene            1681..>2054
                     /locus_tag="VIQ50_03960"
     CDS             1681..>2054
                     /locus_tag="VIQ50_03960"
                     /inference="COORDINATES: protein motif:HMM:NF015961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF374 domain-containing protein"
                     /protein_id="HEY9359564.1"
                     /translation="MLKRLLLSKPAVAACSALAAAYVRLVYATSTLKRDPPDTDAKLF
                     DQHPQILAMWHGQFLLLPKLKPKRPADVRAMVSRHGDAEVIGAVLQKFGMDLIRGAGA
                     GKRKRNRGGATALRESLRALATA"
BASE COUNT          371 a          676 c          622 g          385 t
ORIGIN      
        1 ccgccgacga cgtgttcgtg gccaagaacc agcagatggt ctactgggtc accgccgcca
       61 tcgttgtggt cacggtgatc aaggccattg ccgaatatat tggcgatgtc acggtgaact
      121 atctcggcaa ccggttcatc gccgatctcc gcatccagat gtttggcaag cttgcccgcg
      181 ccgatctgag cttcatccag accgtgcatt cgggacggct gctttccggc tttctcaatg
      241 acgccacgct gatccgcgcc acggcaagcc gctccatggt cacgctcggg gagaactacc
      301 tcaaggtcat catcctggtc gccaccatgt tctacatgga tgcgcgcttc tcggtgctga
      361 tcctgatctt catgccgatc gcctggttca tgctgtcgcg ccagcggcgc aagatgcgga
      421 aatcgacctc caagtctttg caggaaaccg gcgacctctc ggccctgatc acccagactt
      481 tgcgcggcat gcgcatcgtg cgcgcctatc gccaagaaga ccgcgaggaa gcgcgcgctg
      541 cgactgcgat caaccgcgcg ctcgaattca ccatgcgcgg cacccgtgcc cgcgctctgt
      601 cgagcccctc gatcgagctg ctgaccggtc tcggcttcgc gctcgccatc tatttcgccg
      661 gcacgaaggg tgtgcacggc gacctcacgc tcggccactt catgggcttc atgacagcgg
      721 ctttgctgat ctacacgccg ctcaagagcg ccgccacgtt gcagacgcag ttgcaggaag
      781 gcatggccgc cgccagccgc gtgttcggaa tcatcgatct tcaagtccat ttggcggaag
      841 tgccggatgc cgagccgctt aagctcgagc gcggcgagat cgagttcgcg aacgtgtcgt
      901 tcgcctacga gaaggaaaat ccggtgctgc gcagcgtcag cctcacggtg ccgcccggac
      961 ggaccgtggc gctggtcggc ccgtcaggct cgggcaagag cacgctggtc aatcttgcgc
     1021 tgcgcttttt cgatcctgac cgcggcaggg tcatgatcga cagccaggac atcgccaccg
     1081 tcaagatcga ttcgctccgc gactcgatcg cgctcgtgac ccaagacccc gtgctgttcg
     1141 acgatacgat ccgcgccaat atcgcctatg gcaccaagcc ggcagacgag gcgcaagtga
     1201 ttgccgcagc caaggccgca gccgcgcatg acttcatcat ggctctgccc aaaggctatg
     1261 acacccgtgt cggcgaggcc ggcggcctgc tgtcgggcgg cgagcggcag cgcatcgcca
     1321 ttgcccgcgc catctacaag gatgcgccca tccttctgct cgacgagccg accagctcgc
     1381 tcgattcgga agctgaggcc aaggtgcagg ctgcgctcga ggagctgatg cgcgggcgca
     1441 ccgtgctcat gattgcccat cgcctctcga cggttaaaaa ggccgatctc atctgcgtgc
     1501 tcgaccaggg tcgcatcatc gagattggcc gtcacgacga gcttgttgcc aaaggcggcc
     1561 tctataccaa gctgcatcgt actcagttcg gcattgccgg aggatatgcg gcgcctccgc
     1621 ccgagaatca ggggcaagag gcggtcgcgg tggccggcaa atagcctgcg ctagaccggt
     1681 atgttgaaac ggctgctatt atcgaagcct gccgtagccg cctgcagcgc gcttgccgcg
     1741 gcctatgtgc gtctcgtcta cgcgacgagc acgctcaagc gcgatcctcc cgacaccgac
     1801 gccaagctgt tcgaccagca cccgcagatt ctcgctatgt ggcacgggca gtttctgctg
     1861 ctgcccaagc ttaagcccaa gcggcctgcc gatgtgcgcg ctatggtgtc gcgccacggt
     1921 gatgccgagg tcatcggcgc cgtgttgcaa aaattcggca tggacctaat cagaggcgct
     1981 ggcgccggga agagaaagcg taatcgcggc ggcgccacgg ccttgcgcga atcgttgcgg
     2041 gcgctggcga ccgc
//
LOCUS       DATCWM010000205         5733 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_93415, whole genome shotgun sequence.
ACCESSION   DATCWM010000205 DATCWM010000000
VERSION     DATCWM010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5733
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93415"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..518
                     /locus_tag="VIQ50_03965"
     CDS             <1..518
                     /locus_tag="VIQ50_03965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY9359565.1"
                     /translation="DQLSGRYIDTTSDNFCNTMLVSCYSFTALAQRAEKLMPGGGALL
                     TLTYYGAEKWMPHYNVMGVAKAALEASVRYLAADLGEKSIRVNAISSGPIKTLAASGI
                     GDFRYILKWNEHNAPLRRSVTIEEVGDTAVYFLSDLSRGVTGEIHHVDAGYNIVGMKH
                     PDAPDIVVGKE"
     gene            515..1174
                     /locus_tag="VIQ50_03970"
     CDS             515..1174
                     /locus_tag="VIQ50_03970"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEY9359566.1"
                     /translation="MTVPDAPWSPRSVADGSARRQSRPAIYYIRHGLTDWNVEQRLQG
                     RHDVPLNAAGCTQAACCAAILQDLFRREGRAPDSFDYVSSPLVRARGTMEIVRTALGL
                     EPAGYAIDGQLAEIAFGEWEGLTYAQVVARDKHVISARESDKWRFAPPGGESYAQVAV
                     RIRHWCETLARDTVVAAHGGTARALIGHLGLVPPQDAAHYSIDQGVVYLFAGNRLTRH
                     G"
     gene            1309..2427
                     /gene="aroC"
                     /locus_tag="VIQ50_03975"
     CDS             1309..2427
                     /gene="aroC"
                     /locus_tag="VIQ50_03975"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HEY9359567.1"
                     /translation="MSFNTFGHLFRVTTFGESHGVAIGCVVDGCPPRMPLTEADIQPY
                     LDKRRPGQSRFTTQRREPDQVKILSGVFIDEASGEQVTTGTPIALVIDNVDQRSKDYS
                     DIKDKYRPGHADYTYDAKYGIRDHRGGGRQSARETATRVAAGAIARKVVPGMRVRGAL
                     IQMGKHRIESERWNWDEVERNPFFCPDAEKAKFFEGYLDDIRKRGSSVGAVIEVVAEG
                     VPVGLGAPIYGKLDGDLAAALMGINAVKGVEIGTGFASAALSGEENADEIRMGNDGRP
                     IFLSNHAGGILGGISTGQPIVCRFAVKPTSSILTPRRTVDRYGAETEISTKGRHDPCV
                     GIRAVPIGEAMVACVIADHYLRQRGQMGETPAWPFARV"
     gene            2444..3553
                     /gene="ribB"
                     /locus_tag="VIQ50_03980"
     CDS             2444..3553
                     /gene="ribB"
                     /locus_tag="VIQ50_03980"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HEY9359568.1"
                     /translation="MLDNYQRVEAVLMAFAAGGIVVVTDDDDRENEGDLFVAASQCTP
                     EKMAFIIRHTSGIVCAPLSSEEAKRLHLDPMVAANDAPLGTAFTVSVDVRHGLTTGIS
                     AEERTNTVRALANGNAGASDFVRPGHVFPLVAKDGGVLMRSGHTEACVDLCRLAGLSP
                     VGVLAELMNDDGTVMRGPAVTAFAERHQLKQISIADLIAYRQTRDKLVKRIGEFPVQS
                     EIGMLTGYAYVTPFDAIQHMAFVYGRIGDGRNILARLHRADIIRDVFGGAHPIQSSLR
                     RFKQDGRGVIVFLRDGAAGVPTHAIPQAGSTGSEVARSRQWREVGLGAQILKDLGITS
                     IRLLTSRKLTYVGLAGFGIEIVSTERIDDRSPRQE"
     gene            3677..4450
                     /locus_tag="VIQ50_03985"
     CDS             3677..4450
                     /locus_tag="VIQ50_03985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008960171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1194 domain-containing protein"
                     /protein_id="HEY9359569.1"
                     /translation="MAAPRSALPLADNSPTAVPVDVELVLAVDVSYSMDPEEQALQRE
                     GYIAGITSREFMQALRSGHHGKVAVTYFEWAGPYDQKIVVPWRLIDGPEAADAFANEL
                     ARAPYRRASRTSISGALSFAKPLFDGSGYKGFRRVVDVSGDGANNSGTFVTLARDDLL
                     AAGMTINGLPIMLKRPNAFTMDIDNLDIYYEDCVIGGPGAFVVPIREREQFKEATRTK
                     LVLEIAGRTPQRRLVPVQARAPRISCTIGEQMWRDRWGN"
     gene            complement(4592..4912)
                     /locus_tag="VIQ50_03990"
     CDS             complement(4592..4912)
                     /locus_tag="VIQ50_03990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359570.1"
                     /translation="MSELVEFLCKGDHPVEATLREKTREAMKEAIALGHVPIKFTDTR
                     GGTELVVPLDRKRSDVRAIESNNGSAEIKVVGDLTLDYVRVTCVARIDLATLEGEGHL
                     ERVG"
     gene            complement(5241..5423)
                     /locus_tag="VIQ50_03995"
     CDS             complement(5241..5423)
                     /locus_tag="VIQ50_03995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016841592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359571.1"
                     /translation="MQEIDIHDYARQLFDARGDKAVVEAAQKARSLEEQGQREEAETW
                     RHIEAALKQMRGPHES"
BASE COUNT         1032 a         1824 c         1816 g         1061 t
ORIGIN      
        1 aggatcagct gtccgggcgc tacatcgaca cgacgtcgga taatttctgc aacacgatgc
       61 tcgtgagctg ctactcgttc accgcgctgg cgcaacgcgc ggagaagctg atgccgggcg
      121 ggggtgcgct gctcacgctc acctactacg gggccgagaa atggatgccc cattacaatg
      181 tgatgggagt tgccaaggcg gcgctcgagg cgtcggtgcg ctatctcgcg gccgatttgg
      241 gcgagaagag cattcgcgtc aacgccattt cgtcgggtcc gatcaagacg ctggcggcat
      301 cggggatcgg cgacttccgc tacatcctca aatggaacga gcacaacgcg ccgcttcggc
      361 gcagcgtgac gatcgaggag gtcggcgata ccgccgtgta ttttctcagt gacctgtctc
      421 gcggcgtcac cggcgagatt catcacgtcg atgccggcta taacatcgtc gggatgaagc
      481 atcccgatgc gcccgatatc gtcgtcggca aggaatgacg gtcccggacg cgccgtggtc
      541 cccgcgaagc gttgcggacg gcagcgcacg gcgccagtca cgacccgcca tctactatat
      601 tcgccacggc cttactgact ggaacgtcga acaacggctg cagggccgac atgacgtgcc
      661 gctcaacgcg gcgggctgca cgcaggccgc ttgctgtgcc gccatcctgc aagacctgtt
      721 ccgccgcgag ggccgtgctc cggacagctt cgattacgtt tcgagtccgc tcgtgcgtgc
      781 tcgcggaacg atggaaatcg tgcgcaccgc gctcgggctc gagcccgccg gttacgccat
      841 cgacggacag cttgccgaga tcgcatttgg cgaatgggaa gggctgactt atgcgcaagt
      901 cgtggcccgg gacaagcacg tcatttcggc gcgcgaatcc gacaagtggc gcttcgcgcc
      961 gcccggcggc gaaagctacg cgcaagtggc cgttcgaatc cgtcattggt gcgagactct
     1021 cgccagagac accgtggtcg ccgcccatgg cggcaccgcg cgcgcgctga tcggccatct
     1081 cggactcgta ccgccgcagg atgccgcgca ctactcgatc gatcagggcg tggtctattt
     1141 gttcgcgggt aaccggctca cgcgccacgg atgatggtaa acggcaagtc cccctcggcg
     1201 atggatggcc cgatcaagcg gcacttttat cgccgagcgc cgtcggcgcg cgcggccatt
     1261 tgaccgcggc tcgcacgcgg gctaccacac gcccgcgggt ggaaccccat gtcgttcaat
     1321 actttcggtc acctgttccg ggtcacgacc ttcggcgaaa gccacggcgt cgcgatcggt
     1381 tgcgtggtcg acggctgccc cccgcgcatg ccgctgaccg aggcggatat ccagccctat
     1441 ctcgacaaaa ggcggccggg ccagtcgcgc ttcaccacgc agcggcgcga accggaccag
     1501 gtgaaaatcc tctccggcgt gttcatcgac gaagcgagcg gcgaacaggt cacgacgggc
     1561 actcccattg cgcttgtcat cgacaatgtc gatcagcgtt cgaaggatta ctccgacatc
     1621 aaggacaagt accggcccgg ccacgccgat tacacctacg atgccaaata cggcatccgc
     1681 gaccatcgcg gcggcggccg tcaatccgcg cgcgagactg ccacgcgcgt ggctgccggc
     1741 gcgatcgcgc gcaaagtcgt gcctggcatg cgcgtgcgcg gcgcgctgat ccagatgggc
     1801 aagcacagga tcgagtccga gcgctggaac tgggacgagg tggagcgcaa tccgttcttc
     1861 tgtccggatg cggagaaggc caagttcttc gaaggctatc tcgacgatat ccgcaagcgc
     1921 ggctcctcgg ttggcgccgt catcgaggtc gtcgcggaag gcgtgcccgt tggtctcggc
     1981 gcgccaatct acggcaaact cgacggcgat ctcgccgcag cattgatggg catcaacgcc
     2041 gtcaagggag tcgagatcgg cacgggcttt gcatcggcgg cgttgagcgg cgaagagaac
     2101 gccgatgaaa ttcgcatggg caacgacggc aggccgatat ttctttccaa tcatgcgggc
     2161 ggtattttgg gcggcatctc gaccgggcag ccgatcgtct gccgttttgc cgtcaagccg
     2221 acgtcatcga tcctgacgcc ccggcgcacc gtggatcgct acggcgccga gaccgaaatc
     2281 agcaccaagg ggcgtcacga cccgtgcgtg ggcattcgcg cggtgccgat cggggaggcc
     2341 atggtggcat gcgtgatcgc cgatcactat ctgcgtcagc gcgggcagat gggcgaaaca
     2401 ccggcatggc cgttcgcccg tgtctgaacg gagtgagccg acggtgctcg acaactacca
     2461 gcgcgtggaa gccgtgctca tggcctttgc cgccggaggc atcgtggtcg tcaccgacga
     2521 cgacgaccgc gagaacgagg gcgatctgtt cgtcgcggct tcgcagtgca cgccagagaa
     2581 gatggctttc atcatccgcc atacctcggg catcgtgtgc gcacccctgt cttcggaaga
     2641 ggcgaagcgt ctgcatcttg atcccatggt cgcggcaaac gacgcgccgc tcggcaccgc
     2701 ctttaccgtt tcggtggatg tgcgtcacgg cctgacgacc ggtatttcgg cggaggagcg
     2761 gaccaacacg gtgcgcgcgc tcgccaatgg caatgccggc gcgtccgatt tcgtgcggcc
     2821 gggccatgtc ttcccgctgg ttgccaagga cggcggcgtg ctcatgcgct cgggccacac
     2881 cgaggcctgt gtcgacctct gccgacttgc cgggttgtcg ccggtcggcg tcctcgctga
     2941 actgatgaac gatgacggca ccgtgatgcg ggggccggcc gtgacggcgt ttgccgagcg
     3001 ccatcagctc aagcagatct cgatcgccga tctcatcgcc tatcgccaga cgcgcgacaa
     3061 gctggtcaag cgcatcggcg aatttccggt gcaaagcgag atcggaatgc tcaccggcta
     3121 tgcctatgtg acccctttcg acgccatcca gcatatggcg ttcgtctacg gccggatcgg
     3181 tgatggccgg aatattctgg cgcggctgca ccgcgccgac atcatccgcg atgtattcgg
     3241 cggcgcgcat cccatccagt cctccttgcg gcgcttcaag caggacggtc gcggcgtgat
     3301 cgtgttcctg cgcgacgggg cggcgggggt gcccacgcat gccattcccc aggcgggctc
     3361 gaccggctcc gaagtcgcga ggtcccggca atggcgcgag gtcggccttg gcgcccagat
     3421 tctcaaggat ctgggcatca cctccatccg gttgctaacc tcccgcaagc ttacctatgt
     3481 cggccttgcg ggatttggca tcgagatcgt atcgaccgag agaatcgacg atagaagccc
     3541 gcggcaggag tagcaccacg tgggttctcg tcggcaaagc accacgcgag gaattcgtcc
     3601 gctgacggag agaaggatgt atgtatcgct gatctcgatg atggccgccg ccggcgcact
     3661 actggcagtc ggcgcaatgg cggcgccgcg ctcggcgctg ccgcttgccg acaacagccc
     3721 gaccgccgtc ccggtcgatg tcgagctcgt actcgcagtc gacgtatcct actcgatgga
     3781 cccagaggag caggcactcc agcgcgaagg ctatatcgcc ggaatcacct cccgcgaatt
     3841 catgcaggcg ctgcgcagcg gccaccatgg gaaagtggcg gtgacctatt tcgagtgggc
     3901 gggaccgtac gatcaaaaaa tcgtcgtacc atggcggttg atcgacggcc cggaggccgc
     3961 ggatgcattc gccaacgagc tcgcacgcgc gccctatcgg cgcgcctcgc gcacgtcgat
     4021 ttcaggcgcg ctgagctttg ccaaaccgct gttcgacggc agcggctata agggcttccg
     4081 tcgcgtcgtc gacgtttccg gggatggcgc caacaacagc ggcacgttcg tcaccctcgc
     4141 gcgcgacgac ctgctcgcgg ccgggatgac gatcaacggc ctgccgatca tgttgaagcg
     4201 gccgaacgcg ttcaccatgg acatcgacaa tcttgatatc tactacgagg actgcgtgat
     4261 cggcggcccc ggtgcgttcg tcgtgccgat ccgcgagcgc gagcaattca aggaggcgac
     4321 ccgcaccaag ctggtgctgg agatcgccgg ccgcacgccg caacggcgtc tggtaccggt
     4381 gcaagcaagg gcgccgcgta tctcttgcac catcggcgag cagatgtggc gagatcgctg
     4441 gggaaactag cccttaaggc gcgacggcgg taatagtgtc agcgctcctc tcctgcaacg
     4501 cctcgcgaga cttggcgcat ccagataacg tggtgcgatc ggattgctcg ccatcgtcag
     4561 ctggcgacaa gcaagtcgat caccgacaac actatcccac gcgttcgaga tggccctcgc
     4621 cctcgagcgt cgcaagatcg atacgggcga cgcaggtgac ccgcacataa tcaagtgtca
     4681 ggtctcccac cactttgatc tcggcggagc cgttgttgct ctcgatcgcg cgcacgtcgg
     4741 agcgtttccg atcgagcggc acaacgagtt cagtgccgcc ccgggtgtcg gtgaacttga
     4801 tggggacatg acccagcgca atagcctcct tcatggcttc gcgcgtcttt tcgcgcaggg
     4861 tcgcttctac tggatgatcg cctttgcaga gaaattccac caactcgctc actccgcccc
     4921 tccttactga cccgttgtta ggtaccattc gcaatattgt tgaagtccgc aaggtattcg
     4981 acgagcttcc gagaggcata acatgccctc tgcggcttcg ccgctaatta cataaatgat
     5041 cggcgggtgc cagccaaatg tgctagtgga tgaaatccgc agcaatgcgg acaacggtta
     5101 ccgtcagttg aacgatgccg cggcgcggat cacccgctta gttcggacct tcttttgttc
     5161 cgcaccgccg gggacggttg gatcagcgcc ctccgaggta agcctcggcg agcaggcgct
     5221 gccgccgtct cggcgcacct tcagctttcg tgcggtccgc gcatctgctt gagcgccgcc
     5281 tcgatgtgcc gccaagtttc agcctcttcg cgctggcctt gctcttccaa ggagcgagcc
     5341 ttttgagcgg cctcgacaac ggctttgtcg ccgcgggcat cgaataactg gcgggcgtag
     5401 tcgtggatgt cgatttcctg cattcgcatg gcatcgtgct cctcttattc agagcggctg
     5461 cggtggcgga ggggaaccgc gtgcgttgga cctcggagcc gtttccaaag ggataatctg
     5521 catcttggcg agtcgttccg gcaagggttc tcagccagcg ctcctcgaag cgacgcgttg
     5581 gtgcgacccg caaccggacg ggtgatccgc gcctcgcctt ttctcgcgca gaagagcggc
     5641 cgtcttggcg gcagattact ttttgaaaag cccgactaat tccacgtgcg cggaaaacaa
     5701 aaattggtcg accgttgtga cctgcacgat gcg
//
LOCUS       DATCWM010000206         3818 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_347292, whole genome shotgun sequence.
ACCESSION   DATCWM010000206 DATCWM010000000
VERSION     DATCWM010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3818)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3818)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3818
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_347292"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            69..1181
                     /gene="leuB"
                     /locus_tag="VIQ50_04000"
     CDS             69..1181
                     /gene="leuB"
                     /locus_tag="VIQ50_04000"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003862 - 3-isopropylmalate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HEY9359572.1"
                     /translation="MATHKLLLLPGDGIGPEVMAEVKKLIAFMNAHGLGTFETEEALV
                     GGSCYEAHKVAITDATMAKAHAADAVIFGAVGGPNWDGVPYDLRPEAGLLRLRKELGL
                     FANIRPAICYPALAESSSLKREVVDGLDIIILRELTGGVYFGEPKTITDLGNGQKRAV
                     DTQVYDTYEIERIARVGFELARKRRNKVTSMEKRNVMKTGVLWHEVIKELHAREFKDI
                     ALEHQLADAGGMQLVRWPKQFDVIVTDNLFGDMLSDIAAMLTGSLGMLPSASLGEVDA
                     KTKKRKAMYEPVHGSAPDIAGKGVANPIAMLASFGMALRYSLAMAKEADQIEAAIAAA
                     LAQGLRTADIKSEGAKIVTTAEMGDAVIGEMKKLVA"
     gene            1250..2236
                     /locus_tag="VIQ50_04005"
     CDS             1250..2236
                     /locus_tag="VIQ50_04005"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9359573.1"
                     /translation="MTHADWGRFSLAVLLVLGLLALHATGAYADAYPNRPVRLIVPFA
                     AGGLNDVVARLVAPYLERSLGQPLVIDNRPAASGIVGTDATAKAMPDGHTLLMVASSF
                     TVVPATHPKLPYDPERDLAPIAMVAKNPLLFLVNPRVPARSLAEFVALARANPGELNY
                     ASPGAATQTHLVVELFSRKANIKLQHIPYRGGAPAMTAMVAGDTQFTAISTLLSLPQI
                     EAGVLRAIANGSLSRDAQLPNLPTVAEQGFPGFEAIQWIGLLTTAGTPQDVIDRINAE
                     LNRALRDPDLVAKFAQQGLSPAGGTPTEFQRTIATDLKNWTETARTANITAD"
     gene            complement(2273..2638)
                     /locus_tag="VIQ50_04010"
     CDS             complement(2273..2638)
                     /locus_tag="VIQ50_04010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359574.1"
                     /translation="MGRKSCAVGLCLAVIAAMAIAAPPAEAQTNQTKKKPHVYTAQPD
                     PPVNRPRARVTVAPRSFLDAGTEVLPGERKFTDYAFPVGPYSTPLATVQNTGGRVGWH
                     QSPLPGPFDLPSRYNPFGW"
     gene            2852..>3818
                     /locus_tag="VIQ50_04015"
     CDS             2852..>3818
                     /locus_tag="VIQ50_04015"
                     /inference="COORDINATES: protein motif:HMM:NF012401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEY9359575.1"
                     /translation="MLTRRGLITSGAGLVLAARKAAAGPLDLPAALPEGARGNAVLDA
                     LPGKKPLIKLSYRPPNYETPLEYFRTAITPNDAFFVRYHLSNIPEVDVRTWKIAVGGE
                     GANGEAEFTLEDLKRLPATELAAVNLCSGNRRGLFQPHVPGVEWSYGAMGCARWKGAL
                     LKDLLDKVGLKKDAIEILFDGADSGVSDKTPDFVKSIPTWKAVEDTTLVAYEMNGAPL
                     PHLNGFPARLIVPGWTGTYWMKHLTTVKALTKPDTSFWMNPAYRIPLGKFPLVARFTS
                     QETAVNTPITEIVVNSLITDPLDGANVRMGPIIIGGIAWDGGYGIS"
BASE COUNT          737 a         1242 c         1191 g          648 t
ORIGIN      
        1 agcttgccaa gccgtgcgcg cgcctttagc aatccgcgtg gagatgcatt caagcaaggc
       61 aatgcgcaat ggcgacccac aagctccttc ttctcccggg cgacggcatc ggaccggagg
      121 tgatggccga ggtgaaaaag ctcatcgcct tcatgaatgc gcacggtctg ggcaccttcg
      181 agaccgaaga agcgctcgtc ggcggttcct gctacgaggc gcacaaggtt gcgatcaccg
      241 acgccacaat ggccaaggcg cacgcggccg atgccgtgat tttcggcgcg gtcggcgggc
      301 caaactggga cggcgtaccg tatgacttgc gaccggaggc gggactgctt cgcctgcgca
      361 aggagctcgg cctgttcgct aatatccgcc cggcgatctg ctatcccgcg ctcgcggaat
      421 cctcgagcct caagcgtgag gtggtggatg ggctcgacat catcattttg cgtgaattga
      481 ccggcggggt ctatttcggc gagcccaaga ccatcaccga tctcggcaac ggacagaagc
      541 gcgcggtcga cactcaggtc tatgacacct acgagatcga gcgcatcgcc cgggttggct
      601 tcgagctcgc gcgcaaacgc cggaacaagg tcacctcgat ggagaagcgc aacgtgatga
      661 agacgggcgt tctctggcac gaggtgatca aggagctgca cgcacgcgaa ttcaaggaca
      721 tcgcgctcga gcatcagttg gccgatgccg ggggcatgca actcgtgcgc tggcccaagc
      781 agttcgacgt catcgtcacc gacaacctat tcggcgacat gctgtccgac attgccgcca
      841 tgctcacagg atcgctcggc atgctgccgt cggcctcgct cggcgaagtg gatgccaaga
      901 cgaaaaagcg caaggccatg tacgagcccg tacatgggtc cgcgcccgat atcgccggca
      961 aaggcgtggc caatccgatc gccatgctcg cctctttcgg catggcgctg cgctactccc
     1021 tcgctatggc caaggaggcc gaccagatcg aagcggcgat tgccgccgcg ctcgcgcagg
     1081 gactgcgcac cgccgacatc aagtcggaag gcgccaagat cgtgaccacc gcagaaatgg
     1141 gagacgcggt tatcggcgag atgaagaaac tcgtggcctg atgccggcgc tcgcaggatc
     1201 atcggcgcgc gagcggatgc ttggcaacca ggccggcgga tgctcgccaa tgacgcacgc
     1261 ggattggggg cgattcagtc tcgcggtcct cctagtgctc ggcctcctcg cgctgcacgc
     1321 aaccggtgct tacgccgacg cttaccccaa ccgccctgtt cgcctgatcg tgccgtttgc
     1381 cgcgggcggg ctcaacgacg tggtggcgcg cctggtcgcc ccttacctcg agagatcgct
     1441 cggccagccc cttgtcatcg acaaccgccc ggccgcgagc ggcatcgtcg gcaccgacgc
     1501 caccgcaaag gcgatgccgg acggccacac gctgctgatg gtagcctcga gtttcacggt
     1561 ggtccccgcc acccacccga aactgccgta cgacccggag cgcgatctcg cgcccatcgc
     1621 catggtggcg aaaaacccgc tgctgtttct ggtcaatcca agggtaccgg cccgttcgct
     1681 cgcggagttc gtcgcactcg cgcgggccaa tcccggcgag ctcaattacg cctcgccggg
     1741 tgcggccaca caaactcatc tcgtggtcga gctgttcagt cgcaaggcga acatcaagct
     1801 ccagcacatc ccgtatcgcg gcggcgcgcc ggcgatgacg gccatggtcg caggcgatac
     1861 ccaattcacc gcgatctcga cattgctgtc gctgccgcag attgaggccg gcgtattgcg
     1921 cgcgatcgcg aacggaagcc tcagccgcga tgcgcagttg cccaatctgc ccaccgtcgc
     1981 ggaacaaggc tttcccgggt tcgaggcgat ccagtggatc gggttgctga ccacagccgg
     2041 gacgccgcag gacgtcatcg atcgcatcaa cgcggaactc aatcgcgcgc tgcgcgatcc
     2101 cgatctggtc gcaaaatttg cccagcaggg cctctcgccg gcaggcggca cgccaacgga
     2161 gtttcagcgc actatcgcca ccgatctcaa gaactggacc gagaccgcgc gaacggcaaa
     2221 catcaccgcc gactgaggct caaggctcgt gcgggtgaag gcgaacgccg agttaccatc
     2281 cgaacggatt gtagcggctg ggaaggtcga acggcccagg caggggcgat tgatgccagc
     2341 ccacgcgtcc gcccgtgttt tgcaccgtgg ccaaaggcgt cgaatacgga ccaacaggga
     2401 aggcgtaatc ggtgaactta cgctcgccag gcaggacttc ggttccagca tcgaggaacg
     2461 aacggggcgc cacggtgacc cgcgcccgcg ggcgattgac cgggggatcg ggctgcgccg
     2521 tgtagacgtg tggcttcttt ttcgtctggt tggtctgggc ctcggcaggc ggcgcagcga
     2581 tggccatcgc cgcgatcacc gcaaggcaca gcccgaccgc acagcttttg cgacccatgg
     2641 ggctcctcat gcgactcttc ggatcgctac actacccgtg tttcggtttc cgtaacagcg
     2701 aatgcacccc gcgcagctcc actctgtctg caggtgtgtc aaaaatccct ctatcgatcg
     2761 gccggcaaag tcgcgtagat ttgctgcggc ggcacaaaat atggcgctaa tccagccgct
     2821 tacgccaaaa tgaccgggaa ggaaggacgc catgctgaca cgccggggtc tcatcacatc
     2881 gggcgcaggc ctggtcctcg ccgcgcgcaa ggccgcggca ggcccgctcg acttgccggc
     2941 ggcgcttccc gagggggcgc gcggcaacgc ggtgctcgac gcgctgccgg gaaagaagcc
     3001 cctgatcaag cttagctacc gtccgccgaa ctacgagacc ccgctcgaat atttccgcac
     3061 cgccatcacc ccgaacgacg catttttcgt ccgataccat ctctccaata ttccggaggt
     3121 cgacgtcagg acttggaaga tcgccgtcgg cggcgaaggc gctaacggcg aggccgaatt
     3181 cacgctcgag gatctcaaac ggttgccggc aaccgaactg gcggcggtca atctgtgctc
     3241 gggcaaccgg cgcggattgt tccagccgca cgttcccggc gtggaatgga gctacggcgc
     3301 catgggttgc gcgcgctgga agggcgcgct gttgaaggac cttctcgaca aggtcggcct
     3361 caagaaagat gcgatcgaga tccttttcga cggcgccgac tcgggcgtga gcgacaagac
     3421 gcctgacttc gtcaagagca tcccgacctg gaaggcggtc gaggacacca cgctggtggc
     3481 ctatgaaatg aacggcgctc cgctgccgca tctcaacggc tttcctgcgc gtctcatcgt
     3541 gccgggctgg accggaacct attggatgaa gcatctcacc acggtcaagg cgctgaccaa
     3601 gcctgacaca agcttctgga tgaatccggc ctatcgcatc ccgctgggca agtttccgct
     3661 ggtcgcgcgc ttcacctcgc aggaaacggc ggtcaatacg cccatcaccg agatcgtggt
     3721 gaactcgttg attaccgacc ctctcgatgg cgcaaacgtg aggatgggac cgatcatcat
     3781 tggcggcatc gcctgggacg gcggctacgg tatcagca
//
LOCUS       DATCWM010000207         6373 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_158315, whole genome shotgun sequence.
ACCESSION   DATCWM010000207 DATCWM010000000
VERSION     DATCWM010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6373)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6373)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6373
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158315"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..268
                     /locus_tag="VIQ50_04020"
     CDS             <1..268
                     /locus_tag="VIQ50_04020"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007604311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY9359576.1"
                     /translation="SIYVAPAAQRRGIGRALLERLIAEAELGGFRQMIAVIGDSANAG
                     SVELHRAAGFRLVGTFNNVGFKFGRWLDTVLMQRPLGGGATTAP"
     gene            complement(281..655)
                     /locus_tag="VIQ50_04025"
     CDS             complement(281..655)
                     /locus_tag="VIQ50_04025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2794 domain-containing protein"
                     /protein_id="HEY9359577.1"
                     /translation="MSYGDTEPSEFHGGEAPAASFLAPASRVTFDRRELNRIFGLYGR
                     KVAAGEWRDYAIDFLKDRAVFSVFRRASEVPVYRIEKSPKLARRQGAYSVISATGLIV
                     RRGHELDGVLRAIDRSLSVVAP"
     gene            complement(851..1582)
                     /locus_tag="VIQ50_04030"
     CDS             complement(851..1582)
                     /locus_tag="VIQ50_04030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1223 domain-containing protein"
                     /protein_id="HEY9359578.1"
                     /translation="MRRCLAYAAVVICSSVPLQAARAEPRAVIELFTSQGCSSCPPAD
                     QLLGELTSDASLIAVSVPVDYWDYLGWKDTLADPHNTARQKAYAHARGDGQVYTPQVV
                     VNGTLHALGSDKAAIELAVAASRKSGAMSLLPKLTVGDGRLNIAVPDLVDAHTGGEVW
                     LVGVMKAATIAIARGENKGRTITYHNVARRWIKVGDWTGKANSWSIPVQTLKAANVDE
                     AAVLVQSGTTEKPKAILGASLAGIQ"
     gene            complement(1691..4471)
                     /gene="acnA"
                     /locus_tag="VIQ50_04035"
     CDS             complement(1691..4471)
                     /gene="acnA"
                     /locus_tag="VIQ50_04035"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HEY9359579.1"
                     /translation="MTSLDSFRCCKPLKVGSKTYAYYSLPIAEKNGLKSISRLPFSMK
                     VLLENLLRNEDGRSINKEDIQAVAQWLKTKTSEREIAFRPARVLMQDFTGVPAVVDLA
                     AMRDAMQKLGGDPKKINPLVPVDLVCDHSVAVTFFGIPNAAKKNVDEEYRQNRERYEF
                     LKWSQKSFDNFRVVPPGTGICHQVNLEYLSQTVWSKKEKVKVDGKPAVMDVAYPDTLV
                     GTDSHTTMVNGLAVLGWGVGGIEAEAAMLGQPYSMLLPEVIGVKLTGKLKEGVTATDL
                     VLTVTQMLRKRGVVGKFVEYFGPGLANLTIADRATIGNMSPEYGATCGFFPVDDDTLK
                     YLADTGRSAMHVALVAAYTKAQGMYRTKSTPDPIFTDVLKLELSQVEPSLAGPKRPQD
                     RVALKDVKAGFAVAMDKEFNKGGDGGKDIFDLHPSLATSLDKNFAKAGTSKRVPVPGR
                     QHDLGHGDVVIAAITSCTNTSNPNVMVGAGLLARKAVAKGLTVKPWVKTSLAPGSQVV
                     ADYLEKSGLQKDLDKLGYNLVGFGCTTCIGNSGPLAPEISKAINDKDLVAAAVLSGNR
                     NFEGRVNPDVRANYLASPPLVVAYALAGSMYSDLIKQPLGLDKKGQKVFLKDIWPSTR
                     EINGVIRKTLNKQMFTKEYADVFKGDSNWRAINVKGGLTYNWDKKSTYVQNPPYFAGM
                     GRHPTPLTDIVDARVLCLLLDSITTDHISPAGSIKIDSPAGKYLIDHKVKPADFNQYG
                     TRRGNHEVMMRGTFANIRLKNQMVPGVEGGVTVHYPSRQRMSIYDAAMRYKQDKVPLV
                     VFAGKEYGSGSSRDWAAKGPSLLGVRAVITQSFERIHRSNLIGMGVLPLCFEEGTSWQ
                     SLGLRGDEQVTIRGLHGEIKPRQRMIAEIVAADGGLKRVPLVCRIDTLDELDYFKHGG
                     ILHYVLRHLVAA"
     gene            4760..5386
                     /gene="ccmA"
                     /locus_tag="VIQ50_04040"
     CDS             4760..5386
                     /gene="ccmA"
                     /locus_tag="VIQ50_04040"
                     /EC_number="7.6.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015439 - ABC-type heme transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC exporter ATP-binding protein CcmA"
                     /protein_id="HEY9359580.1"
                     /translation="MRLRGSDLACVRGGREVFRGLAFTVEAGEALVVTGPNGAGKSSL
                     LRMVAGLVRPQQGQLELEGGDVELTRGEHVHYLGHQDALKPSLSVRENLGFWAALLGG
                     DGTKSDVALAAVGLGGLAQLPAVYLSAGQRRRLAVARLIAVERSIWLLDEPTSTLDAA
                     AQAMLADLMRAHLAGHGLILVASHGPIGLDGAKELRLGQQVDQRMQPP"
     gene            5383..6051
                     /gene="ccmB"
                     /locus_tag="VIQ50_04045"
     CDS             5383..6051
                     /gene="ccmB"
                     /locus_tag="VIQ50_04045"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015232 - heme transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HEY9359581.1"
                     /translation="MTALCALLVRDLRLAVRVGGGALTGVLFFLIVVTLMPFAIGPDL
                     ALLARMGPAILWLGALLASLLALDRLLAMDHEDGSLDLILTAPVPLELAVVVKAFAHW
                     LTTGLPLVISSPLLGLLLNLEAKASGAVALTLLAGTPALTFIGLIGAALTMALRRGGL
                     LLAVLVLPLTVPVLIFGVAASNAAITGPVPFGAPFGILCALTLISLVIGPLAAAVALR
                     QGLE"
     gene            6137..>6373
                     /gene="ccsA"
                     /locus_tag="VIQ50_04050"
     CDS             6137..>6373
                     /gene="ccsA"
                     /locus_tag="VIQ50_04050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HEY9359582.1"
                     /translation="MSLIDLANPSRFLALTARALPWLAAVTGLAFAIGISQVYLAPDD
                     YQQGATVKIMFIHVPAAWLGIFAWIVMSVAALGTL"
BASE COUNT         1092 a         2009 c         2035 g         1237 t
ORIGIN      
        1 ttcgatctac gtcgccccgg cggcgcagcg ccgcgggata ggccgcgccc tcctcgaacg
       61 gctaatcgcc gaggccgaac tcggcggatt tcggcaaatg atcgcggtca tcggagattc
      121 cgccaacgcc ggctcggtcg agctgcaccg cgccgccggt ttccgcttgg tcggcacctt
      181 caacaatgtc ggcttcaagt tcggccgttg gcttgacacc gttttgatgc agcgaccgct
      241 cgggggcgga gcgacgacag cgccctgatc tgcaccgccg tcagggcgcc accacgctga
      301 gcgatcgatc gatcgcccgc agcacgccgt cgagctcgtg gccgcggcgc acgatcagac
      361 cggtcgccga aatcacgcta taggcgcctt ggcggcgagc gagcttcgga cttttctcga
      421 tgcggtaaac cggcacttcc gacgcacggc ggaacacgga aaacaccgcg cggtccttga
      481 ggaagtcgat ggcgtagtcg cgccattcgc cggcggcaac cttgcgacca tagaggccga
      541 aaatccggtt gagctcgcgc cggtcgaagg tcactcggct ggcgggggcg aggaacgatg
      601 cagcgggagc ctcgccccca tggaactcgc tcggctcagt atcgccgtag ctcatccggc
      661 gcctccattt cgtagatcga gcggcaatga ttgcgccgga tgcatccatc ggcaagaggg
      721 aatgaatgtc gcagtggcgc atcgcgcggc tcgacctagc gacgcgcgag tctcgccgat
      781 tcgtcaatgg aaccataatg ctgaggtgcc gtacaagccc ttgcgccggg cgttgcttat
      841 cgcggcagat ttactgaatc ccagccagcg aagcgcccag gatggccttg ggcttttccg
      901 tcgtgccgct ctgcaccaga acagcggctt cgtcgacatt cgccgccttg agcgtctgca
      961 cggggatgct ccacgaattg gccttgccgg tccaatcgcc gaccttgatc cagcgacgcg
     1021 cgacgttgtg ataggtaatg gtgcgacctt tattctcacc gcgcgcgatc gcgatggtgg
     1081 cggccttcat gaccccgacg agccagactt ccccgccggt gtgagcatcg acgaggtccg
     1141 gcacggcgat gttgagccgc ccatcgccga ccgtaagctt cggcagcaaa gacatcgcgc
     1201 cgctcttccg gcttgcggcg acagcaagct cgatcgcagc cttgtcgctg ccgagggcgt
     1261 gcagggttcc attcaccacc acttgcggcg tgtaaacctg accatcgccg cgggcatggg
     1321 cgtacgcctt ttgccgggcg gtattgtgcg gatccgcgag cgtgtccttc cagccgagat
     1381 aatcccagta gtcgaccggc acgctgaccg caatcagcga ggcatcactc gtcagctcac
     1441 cgagcaactg atcggccggc gggcaggacg agcagccttg gctcgtgaac aactcgatga
     1501 cggcgcgggg ctcggcacgg gcggcctgta gcgggacgga agaacaaatg acgaccgccg
     1561 cgtaggcgag gcaacgacgc ataatcgatt ttgtccctaa ccaagtagtc cggtttgccc
     1621 cctcgccaca ggattcatag gcagcggagc gatcacccgc tactcaattc gaggtgagcc
     1681 gacggcccct ctaagccgcc acgaggtgcc gcagcacata gtgcaatatg ccgccgtgct
     1741 tgaaatagtc gagctcgtcc agggtatcga tgcggcaaac gagcgggacg cgcttgagcc
     1801 cgccatcggc tgccacgatc tcggcgatca tccgctgtcg cggcttgatc tcgccatgca
     1861 gcccgcggat cgtcacctgt tcgtcgcccc gcagaccgag cgattgccac gacgtgcctt
     1921 cctcgaaaca gagcggcaaa acgcccatgc cgatgaggtt tgaacgatgg atgcgctcga
     1981 acgactgggt aatcaccgcg cgcacaccga gcaagctggg tcccttggcg gcccaatcgc
     2041 gcgaggaccc gctgccgtat tcttttccgg cgaacacgac gagcggaacc ttgtcctgct
     2101 tgtatcgcat tgccgcgtcg tagatcgaca ttcgctggcg tgacggataa tgcacggtca
     2161 cgccgccctc gacacccggc accatctggt tcttgaggcg gatattggcg aaggtgccgc
     2221 gcatcatcac ctcgtgattg ccgcggcgtg tgccgtactg gttgaaatcg gcgggcttca
     2281 ccttgtggtc gatgaggtac ttgcctgcgg gcgagtcgat cttgatagaa ccggccggcg
     2341 agatgtggtc ggtcgtgatc gaatcgagca ggaggcagag cacgcgcgca tcgacgatgt
     2401 cggtcagcgg cgtcgggtgt cgtcccatgc cggcgaaata gggcgggttc tgcacgtagg
     2461 tcgacttctt gtcccagttg taggtcaaac cacccttcac attgatggcg cgccagttgg
     2521 aatcgccctt gaaaacgtcg gcgtattctt tggtgaacat ctgcttgttc agcgtcttgc
     2581 ggatgacgcc attgatctcg cgcgttgacg gccagatgtc cttgaggaag accttctggc
     2641 ctttcttgtc gaggccgagc ggctgcttga tgagatcgga atacattgag cccgcgagcg
     2701 cataggcgac gaccagcggc ggcgaggcga gataattcgc gcgcacatcg ggattgacgc
     2761 ggccctcgaa gtttcgattg ccggacagca ccgcggcggc gacaagatcc ttgtcgttga
     2821 tcgccttgga aatctccggc gcgagcggac cggaattgcc gatacaggtg gtgcagccga
     2881 agccaacgag attgtagccg agcttgtcga gatccttctg cagcccggat ttctcgagat
     2941 agtcagcgac aacctgggaa cccggggcca gcgaggtctt cacccacggc ttgaccgtca
     3001 agcccttcgc caccgccttg cgcgcaagca ggccggctcc gaccatcacg ttgggattcg
     3061 aagtattggt gcaggaggtg atcgcggcga tcacgacgtc gccgtggccg aggtcgtgct
     3121 ggcgacctgg gaccggcacg cgcttcgacg tccccgcctt ggcgaagttc ttgtcaagcg
     3181 acgtggcgag cgagggatgg agatcgaaga tgtctttgcc gccgtcgccg cctttgttga
     3241 actctttgtc cattgccacc gcgaaaccgg ccttgacgtc cttgagcgcc acgcggtctt
     3301 gcgggcgctt gggtccggcg agcgaaggct cgacttgcga caattcgagt ttgagcacat
     3361 cggtgaagat cggatccggc gtcgactttg tccgatacat gccctgcgcc ttggtgtagg
     3421 cggcgaccag agcgacgtgc attgctgacc ggccggtatc ggcaagatat ttcagcgtgt
     3481 cgtcatcgac cggaaagaac ccgcaggtcg cgccgtattc cggcgacatg ttcccgatgg
     3541 tggcacgatc ggcgatcgtc agattggcga gaccaggacc gaaatactcc acgaacttcc
     3601 cgaccacgcc ccgcttacgc agcatctggg tgacggtaag caccagatcg gtggcagtga
     3661 caccttcctt gagcttgccg gtgagtttca cgccgatcac ttccggcagc agcatcgaat
     3721 acggctggcc gagcatggca gcctcggcct cgatgccgcc gacgccccag ccgagcacgg
     3781 cgagaccatt gaccatggtg gtgtgcgaat cggtgccgac aagcgtgtcc ggataggcca
     3841 catccatcac ggccggcttg ccgtcgacct tgaccttctc cttcttgctc cacaccgtct
     3901 gcgacaaata ttccaggttg acctgatggc aaatgccagt gccgggcggc acgacgcgga
     3961 agttatcgaa cgatttctgc gaccatttga ggaattcgta gcgctcgcgg ttctgccgat
     4021 attcctcgtc gacgttcttc ttggcggcat tggggatgcc gaagaaggtg accgcaaccg
     4081 agtgatcaca gacgagatcg accggcacga gcgggttgat cttcttcggg tcgccgccga
     4141 gcttttgcat ggcatcgcgc atggcggcga ggtccacgac cgccggcacc ccggtgaagt
     4201 cctgcatcaa cacgcgtgcc ggacgaaagg cgatctcgcg ttctgatgtc ttggtcttga
     4261 gccattgcgc gaccgcctgg atgtcctcct tgttgatcga gcggccgtct tcgttacgca
     4321 gcaaattttc cagcagcacc ttcatggaga acggtagtcg cgagatactc ttgagcccat
     4381 tcttctcggc gatcggcagg ctgtaatagg cgtaggtctt gctgcccact ttcaggggtt
     4441 tgcagcagcg aaagctgtcg agtgaagtca ttgtgatcgg gtcccatcca accgggagag
     4501 gcgcggttcg acggtagaaa actaccggaa acgctcccct cgtcaccggc cgcgagtcca
     4561 gcgcgggttg atagtgggcg cgggacgatg gcttataggg tctttttttg cgccattcca
     4621 gaaaatcgac gcgcgccaac gacatgggca cagaatcagg gttttttccg cctcccgtcc
     4681 ccgccagtgg gagcgcgagc gccggacgct tcgggacaag cgggtgccct ccgggcggta
     4741 ggtcgggggc cggtgcgtga tgcggcttcg agggtccgac cttgcttgcg tcagaggggg
     4801 ccgcgaggtc ttccgtgggc tcgcctttac cgtcgaggcg ggtgaagcac tcgtggtgac
     4861 aggccccaat ggtgcgggca aatcctctct gctgcgcatg gtggcgggcc tggtgcggcc
     4921 gcagcaaggt cagctcgaac tcgagggcgg tgatgtggag ctgaccaggg gcgagcatgt
     4981 ccactatctc ggccaccagg acgcactgaa gccgtcgctg tccgtccgcg agaacctcgg
     5041 cttctgggcg gcgcttctgg gcggcgatgg gacaaagagc gatgtcgcgc ttgccgccgt
     5101 cggactcggc gggcttgcgc agttgcccgc ggtctatctc tctgccggac aacgacgccg
     5161 cctcgcggtt gcccggctga tcgcagtcga gcggtccatc tggttactcg atgagccgac
     5221 ctccacgctc gacgccgcgg cgcaagcgat gttggccgac ctcatgcgcg cccatctcgc
     5281 cggccacgga ctgattctgg tggctagcca tggcccgatc ggactggatg gggcgaagga
     5341 actgcgcctg ggtcagcagg tggatcaacg gatgcagccg ccatgaccgc gctctgcgcg
     5401 ctactcgtcc gcgacctgcg gctcgccgtg cgcgtcgggg gcggcgcact gaccggcgtg
     5461 ctgttctttc tcattgtggt gacgctgatg ccgttcgcca ttggtcccga cctcgccctg
     5521 ctggcgcgga tgggacccgc gatcctttgg ctgggggcgc tgctcgcgag tctgctcgcc
     5581 ctcgaccgac tgcttgcaat ggatcacgag gacggctcgc tcgacctgat cctcaccgcg
     5641 ccggtgccgc tcgagctagc ggtcgtcgtc aaagcgttcg cgcactggct cacgacgggc
     5701 ctccccctcg tcatatcttc gccgctgctc ggcctcctgc tcaacctcga ggcgaaggcg
     5761 agcggcgcgg ttgctcttac attgctcgcc ggcaccccgg cgctgacctt cattggcctt
     5821 attggggcgg cgctcaccat ggcattgcgg cgcggtggtc tcctgcttgc ggtcctggtc
     5881 ctgccgctga cggttcccgt gctgatcttc ggcgtcgcgg cctcgaacgc ggcgatcacc
     5941 gggccggtcc cgttcggcgc gcctttcggt atcctctgcg cgctcacgct gataagcctc
     6001 gtgatcggcc ccctcgccgc cgcggtcgcg ctacggcagg ggttggaatg agcgcgaagt
     6061 tgcacgacat gagagcggcg cgacgagcgg ctcgccaaat cgccgccggc gcaaatcacg
     6121 attaggaaga cgtgcgatga gcctgatcga cctcgccaac ccgtcccgtt tcctcgccct
     6181 caccgcgcgc gcattgccgt ggctcgcggc ggtaacgggt ctggcatttg ccatcggcat
     6241 cagtcaggtc tacctcgcac ccgatgacta tcagcaaggc gcgaccgtga agatcatgtt
     6301 cattcacgtg ccggcagcgt ggctcggcat ttttgcctgg atagtgatga gcgtggccgc
     6361 gctaggcacg ttg
//
LOCUS       DATCWM010000208         5042 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_412235, whole genome shotgun sequence.
ACCESSION   DATCWM010000208 DATCWM010000000
VERSION     DATCWM010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5042
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_412235"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(22..1182)
                     /gene="alr"
                     /locus_tag="VIQ50_04055"
     CDS             complement(22..1182)
                     /gene="alr"
                     /locus_tag="VIQ50_04055"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEY9359583.1"
                     /translation="MTVHDADLRSATAPLATADPTEAGGVLTIDLAAVESNWKRLAGL
                     TVPVECAAVVKADGYGCGLEPVTRTLHRAGCRTFFVADVAEGRRARTVAPDATIYVLN
                     GVMPGSAQAFAADHLRPVINSTTELAEWDAFVATKNWRGGAALHVDTGMNRLGITVEE
                     AATIAPRLQSENHGFTLVMSHLACAESPDHPMNARQLRLFRDIRMAYRGVASSLANSS
                     GIFLGERAYCDLVRPGVALYGVNPTPGKANPMRRVVEVKGRIIQVRTIDKGETVGYGA
                     AFTAGRTSRIAIIAVGYADGFLRSAGTARGKPAAEVIVAGKRCPLAGRVSMDVLAVDV
                     TDVAEGAVRRGDFATLIGDRVSVDDLAAGMGTIGYEVLTDLGRRYHRLYKGG"
     gene            complement(1313..2809)
                     /locus_tag="VIQ50_04060"
     CDS             complement(1313..2809)
                     /locus_tag="VIQ50_04060"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HEY9359584.1"
                     /translation="MAQLDSALRKQPGESTPPYRAAPHNIEAEQALLGAVLVNNEALY
                     RVSDFLEPEHFFEPIHRQIYDISRSLIRTGKLASPVTLKTFLPAEIDIAGLTLGQYLA
                     RLAAEATTIINAVDYGRTIYDLAIRRELITIGEDMVNVAFDAPVDFAPAEQIDDAERR
                     LYELAEVGRYGGGFQKFETALTTAVDMAARAYQREGKLSGLATGLKDLDSKMGGLQSS
                     DLIIVAGRPGMGKTALATNIAYNVARAWRGEVRADGHIDTVNGGIVGFFSLEMSAEQL
                     ATRIIAEQSEIPSSTIRRGGINERDFEKIKDVAIELQHLPFFIDETGGLTVAQLAARA
                     RRLKRQKGLDLLVIDYIQLLQGSTRRAMEGRVQEVTEITTSLKALAKELNVPVVALSQ
                     LSRQVENRDDKRPQLSDLRESGSIEQDADVVMFVFREEYYLSNKEPRAGTDDHTRWQV
                     EMATVHGKAEIIIGKQRHGPTGTVNVQFDAAVTRFDNLAQTDQMPERV"
     gene            complement(3050..4321)
                     /locus_tag="VIQ50_04065"
     CDS             complement(3050..4321)
                     /locus_tag="VIQ50_04065"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclopropane-fatty-acyl-phospholipid synthase
                     family protein"
                     /protein_id="HEY9359585.1"
                     /translation="MDRLLRAACQRLIRMGNLRVTTAAGSSFSCGDGSGTPVAIRFAN
                     RAVERHVLLDPELRLGEAYMDGSLVVEQGSIAEFLDLVVRNLSRTPATPFTRPLRTLR
                     AIARRLLDYNTLQRARRNAVHHYNIDYRIYRMFLDADLQYSCAYFENSGVSLDQAQLA
                     KKRHIAAKLLLKPGLKVLDIGSGWGGLGLYLARSSKVSVVGINLSDEQVRIAQQRAAA
                     AGVPCEFRIQDYRTVAEKFDRIVSVGMFEHVGKQHYHAFFHKCRDLLADDGVVLLHTI
                     GRWNGPGATNAWVRRYIFPGGYTPALSELAPAIESSGLIVSDIEVLRLHYADTLHAWR
                     TNFLAKRDEIVRLFDETSELNKRFGSAERFIRMWEYYLAGFEASFRYYGLAVFQIQLL
                     KSIEAAPLTRDYMYRKKLEVDSSAEFRAAAE"
     gene            4585..>5042
                     /locus_tag="VIQ50_04070"
     CDS             4585..>5042
                     /locus_tag="VIQ50_04070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359586.1"
                     /translation="MPRIALILLAVAAAGGAVAPAWAQANLDAGKSAAQIFADTCNAC
                     HRSAREIKPTSAAFLREHYTTGPRAAAAMAAYLASIGSDARAVQQRRAPTLGAGQAPS
                     PGADQAKPAGDQAAAPANDRNAAARPRRPSESIEAGNLPLAPAPGSAAEAG"
BASE COUNT          913 a         1571 c         1632 g          926 t
ORIGIN      
        1 cgcgtgacta ctggtccaga gtcacccgcc tttgtaaagg cggtggtacc gccgcccgag
       61 atcggtaagg acctcgtagc cgatggtgcc cattccggcg gcgaggtcgt cgacgctcac
      121 ccggtcgccg attaaggtgg caaaatcgcc gcggcgaacg gcgccctcgg cgacatcggt
      181 gacgtcgacc gccagcacat ccatggatac ccggccggcg agcggacaac gctttcctgc
      241 gacgatgacc tcggccgccg gcttgcctct agcggtgccg gccgaccgca agaagccgtc
      301 cgcatagccg accgcgatga tcgcgatgcg gctcgtccga ccggcggtga aagccgcgcc
      361 gtaaccgacg gtttcgccct tgtcgatcgt gcgcacctgg atgatgcggc ctttgacctc
      421 caccacacgg cgcatgggat tggccttgcc cggggtagga ttgacgccat agagcgcgac
      481 acctggccga acgaggtcgc aataggcgcg ctcgccgagg aatatgcccg aggaattcgc
      541 gagcgaagac gccaccccgc gataggccat ccgaatgtcg cgaaacaggc gcaactgtcg
      601 agcattcatg ggatgatcgg gagactcggc gcaggcgaga tggctcatca ccagcgtgaa
      661 accgtgattt tcggactgca ggcgcggggc gatggtagcc gcctcctcga ccgtgatgcc
      721 gagccggttc atgccggtgt cgacgtggag ggctgcgccg ccgcgccaat tcttggtggc
      781 gacgaaggcg tcccattcgg ccagctcggt ggtgctgttg atgaccggcc gtagatgatc
      841 ggctgcgaag gcttgcgccg agcctggcat cactccgttg agtacgtaga tggtggcgtc
      901 gggcgcaacg gtgcgtgccc gccgcccttc cgcgacgtca gcgacgaaga aagtcctgca
      961 cccggctctg tgtagggtgc gcgtgaccgg ctcgagcccg catccatagc cgtcggcttt
     1021 gaccacggcg gcgcattcca ctggcacggt caagcccgcg agccgcttcc aattggactc
     1081 gacggcggca agatcgatgg tgaggacgcc accggcttcc gtcgggtccg cagtcgcgag
     1141 tggcgcagtg gcggaccgca ggtcggcatc gtgcacggtc atggggaacg tttatggcga
     1201 gcgcaggcgc ggccgtccag ggcaggtcgg cgaggataag cgcggcttga cgcccggcca
     1261 gcatgagcct cagcccgcaa gcccgtcgtc aatgcacgtc gatggcctgt gattagaccc
     1321 tctcgggcat ctgatcggtt tgcgcgaggt tgtcgaagcg agtgaccgcc gcgtcgaatt
     1381 ggacattgac ggtaccggtc ggcccatggc gctgcttgcc gatgatgatc tcggccttgc
     1441 cgtgcacggt ggccatctcc acctgccatc gcgtgtggtc gtcggtgcct gcgcgcggtt
     1501 ccttgttgct cagataatat tcctcgcgga aaacgaacat caccacgtcg gcgtcctgct
     1561 cgatcgagcc cgattcgcgc agatccgaga gttgcggccg tttatcatcg cggttctcga
     1621 cctgccgtga caattgcgaa agcgccacta cggggacgtt gagctccttc gcaagcgctt
     1681 tgaggctcgt ggtgatctcg gtcacctcct gcacgcggcc ttccatggcg cgccgggtcg
     1741 agccctgcaa cagctggatg taatcgatga cgaggagatc gagacctttc tgccgcttga
     1801 gacgccgggc tcgggcggca agttgcgcga cggtcagccc gcctgtctcg tcgatgaaga
     1861 acggcaagtg ctgcagctcg atcgccacgt ccttgatctt ttcgaagtcg cgttcgttga
     1921 taccgcctcg cctgatggtg ctggagggga tttcgctctg ctcggcgatg atgcgggtgg
     1981 cgagttgctc ggccgacatt tccagcgaga agaagccgac gatgccgccg ttcacggtat
     2041 cgatgtgtcc gtccgcacgc acctcgccgc gccacgcgcg cgcgacgttg taggcaatat
     2101 tggtggcgag cgcggtcttg cccatgcccg ggcggccggc cacgatgatc agatcggatg
     2161 actgcaggcc acccatcttg ctatcgaggt ccttgaggcc ggtcgcaagg cccgagagct
     2221 tgccctcgcg ttgataggcg cgcgcagcca tgtcgacggc tgtggtcagc gcagtctcga
     2281 atttctgaaa cccaccgccg tagcgtccga cctccgccag ctcataaagg cgacgctcgg
     2341 catcgtcgat ctgttcggcc ggcgcgaaat cgaccggcgc gtcgaaggcg acgttgacca
     2401 tgtcctcgcc gatggtgatc aactcccgcc ggatcgcgag atcgtagatg gtacggccgt
     2461 agtcgacggc gttgatgatg gtcgtcgctt cagcggcgag ccgggcgagg tactgaccca
     2521 gcgtcaatcc ggcgatatcg atctcggcgg gcaggaaggt cttgagcgtt accggcgagg
     2581 ccagtttgcc ggtgcgaatg aggctgcgcg agatgtcgta gatctgccta tggatcggct
     2641 cgaagaaatg ctccggctca aggaagtcgc tgacgcggta aagcgcctcg ttgttgacca
     2701 ggacggcgcc gaggagggcc tgctccgcct cgatattgtg cggcgcggcg cgatagggcg
     2761 gggtcgactc ccctggttgc ttgcgtagcg cggaatcgag ttgagccatg atgctttggc
     2821 gaatcgcatt tggtcgaacg taaagagtcg cgggtttata cctgccggtg attcgaggcg
     2881 atgacccgtt gctgctttcc ccgataccca ccgggcggat aatctgcgag acaaaagcct
     2941 tgacgatttt gcagttccac cgggggaacc tgcggcggac cctcgaagtg ccgctctccc
     3001 cagtcgcaac cgcaatcggt caccaccttc gagcgcttcg agcggaagct tattcggccg
     3061 ccgcgcggaa ttcggcgctc gaatcgacct caagcttttt gcggtacatg taatccctcg
     3121 tgagcggcgc ggcctcgatg ctcttgagaa gctgaatctg aaatacggcg agtccgtaat
     3181 aacgaaacga tgcctcgaat ccggccaggt agtattccca catccggatg aaccgttccg
     3241 cgctgccgaa ccgcttgttc agctccgaag tttcatcaaa cagcctgacg atctcgtcgc
     3301 gcttggcaag gaagttggtc cgccatgcat gcaacgtgtc cgcgtagtgg aggcgcagga
     3361 cctcgatatc gctgacgatc aagcccgagc tttcgatcgc gggggcaagt tccgagagtg
     3421 ccggtgtgta gccgcctgga aagatgtaac ggcgaaccca ggcgttggtc gcacccgggc
     3481 cattccagcg cccgatcgtg tggagcagga cgacgccgtc gtccgccagc aagtcgcggc
     3541 atttgtgaaa gaacgcgtgg taatgctgct tgccgacgtg ctcgaacatt ccgaccgaga
     3601 cgatgcggtc gaatttttcg gccaccgtgc gataatcctg gatgcgaaat tcgcacggaa
     3661 ctcctgcggc ggccgcgcgc tgctgcgcga tacgcacctg ctcgtcggat agattgatgc
     3721 cgacgaccga aactttggag ctgcgtgcga ggtaaaggcc gagccctccc cacccgctgc
     3781 cgatatcgag taccttaagt cctggcttga gcagcagttt ggcggcgatg tggcgtttct
     3841 tcgcgagttg cgcttgatcg agagaaacgc cgctgttttc gaaataagcg cacgaatatt
     3901 gtaggtccgc atcgagaaac attcggtaga tgcgataatc gatattgtag tggtgtacag
     3961 cgttgcgacg cgccctttgc agcgtgttgt agtcgagtag ccggcgcgcg atcgcccgca
     4021 acgtgcgcaa cggccgcgta aaaggggtgg caggagtccg gctgagattc ctcaccacaa
     4081 ggtcgagaaa ctccgcaatc gagccttgct cgaccacgag gctgccatcc atgtaggctt
     4141 cgcccaatct gagctcgggg tcgaggagaa cgtgccgctc gacggcccgg ttggcaaagc
     4201 ggatcgcgac cggcgtgcca gagccgtcac cgcagctaaa gctcgatcct gccgcggtcg
     4261 tgacccgaag gttccccatg cggatcagcc tttggcaggc cgcccgaagc aaccgatcca
     4321 tcggccgcct ccatcgcgtc acatgctcgc ttagcctgcg gggctgctca cgtcccgctg
     4381 ccgccgcgaa cccagggccc ccggtcgatc gcaagcctac gaagcctatg aattaaaaca
     4441 aactctctgg ggcctcgcaa cgcgcttgca tcgcagcaag gcgggaaaat aaggcccctt
     4501 gtctggtcgg cccggccgca tcctcttttg gccaaaaagt ggcagcaaag gatcggatag
     4561 gatcagctgg aacggagacg cgtcgtgccg aggattgctc tcatcctgct cgccgtggcc
     4621 gctgccgggg gggcggtcgc gccggcatgg gcacaagcga acctcgacgc cggaaagtct
     4681 gccgcgcaaa tcttcgccga cacctgcaac gcgtgtcacc gcagtgcgcg ggaaatcaag
     4741 ccgaccagcg cggcatttct gcgggagcat tataccaccg gcccgcgcgc agccgcggcc
     4801 atggctgcct atctcgcctc gatcggcagc gatgcgcggg cggttcagca gcggcgcgcc
     4861 cccacattgg gggcgggcca ggctccctcg ccaggggccg accaggccaa acctgcaggt
     4921 gatcaggcag cagctccggc gaacgaccgc aacgcggcgg cgagacctcg tcgtccatcg
     4981 gagagcatag aagcgggcaa tctccccctt gctcccgcgc caggaagcgc cgccgaggcg
     5041 gg
//
LOCUS       DATCWM010000209         5745 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_93443, whole genome shotgun sequence.
ACCESSION   DATCWM010000209 DATCWM010000000
VERSION     DATCWM010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5745
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93443"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..769
                     /locus_tag="VIQ50_04075"
     CDS             <1..769
                     /locus_tag="VIQ50_04075"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9359587.1"
                     /translation="GGTIGSARVAAANPDGYTLLAGSMGSHVAAPVLTPNVKYDSERD
                     IEPIGFTAHAPAVVVANKDFPAKDLRDFVAYLKKQGESVKQAHGGIGSSSHMACLLFA
                     SAAGVRPTLVAYRGTGPALNDLIGGHVDFFCEQAVSVAPQITSGTIKAYGVSSSQRLV
                     ALPEVPTAQEAGVDYQMSIWAGIFAPKGTPKPIIDKLAGALDQALDDPGVQTRLTGLG
                     GSMPSKSERAPGKFSDFVKAEIARWSPILKAANTEGK"
     gene            complement(844..1008)
                     /locus_tag="VIQ50_04080"
     CDS             complement(844..1008)
                     /locus_tag="VIQ50_04080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359588.1"
                     /translation="MAARTRVALVFWMAVAVAVTILTIKPWARAPEAQSAASIETREI
                     IYRPSHWTVY"
     gene            complement(1170..2360)
                     /locus_tag="VIQ50_04085"
     CDS             complement(1170..2360)
                     /locus_tag="VIQ50_04085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012042263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urate hydroxylase PuuD"
                     /protein_id="HEY9359589.1"
                     /translation="MVAVLTEWSSLLIRWLHVVAAIAWIGSSFYFIHLDLSLKPRSGL
                     PQGVQGDAWQVHGGGFYHMVKYLIAPARMPDELTWFKWEAYTTWLSGFALLVIVYYLG
                     AELYLIDKSVLNLTAPTATAIAFVSLALAWLMYEALCRSALGRHEVALALVGYVFLVG
                     LTYGFTHVFSGRGAFTQIGALIGTIMVANVFVIVIPNQKKTVAALLAAKEPNAAWGEQ
                     AKQRSVHNNYLTLPVVFLMIANHYPLMFATRFNWLIVAIVLAVGPVIRHFFNSRHEGK
                     GSPWWTWGVAAAGMLAVAWLSAAGPADIGSRADRLDVKAAQNAILARCSMCHRSEPVW
                     PGVHTPPKGVVLDDPDSIRRHARLIEVNAVRSNAMPPGNVTAMTAQERGLIATWLAAG
                     APAQ"
     gene            2466..3731
                     /locus_tag="VIQ50_04090"
     CDS             2466..3731
                     /locus_tag="VIQ50_04090"
                     /inference="COORDINATES: protein motif:HMM:NF006775.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016813 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear
                     amidines [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="allantoate amidohydrolase"
                     /protein_id="HEY9359590.1"
                     /translation="MIEAATRTGGEPGAFGERIMELAERLAQWSESTDGLTCTYLSPA
                     HRAVAAEIGDLMRRAGLITEIDAVANVVGRYPTRDQAARALILASHYDTVRNAGKYDG
                     RLGVLTALVVAEHLKRLDRKLPFHLDVIAFSEEEGVRFSSSFLGSCAVAGRFDSKLLE
                     RRDAGGVSLAAAMREAGLDPGKIPALGRRREELVGYLEVHIEQGPVLLEERLSAGIVS
                     AIAGSVRMMITVTGTAGHAGTVPMARRHDAAAAAAELLLYVEKRCAQAPTLVGTVGQL
                     GVPDGAINIIPGRCELTLDVRAGDDATRDAAMSDIMAEIDRIAARRGVSFDCREVQRT
                     AAVRCSSHLQSVLSDALTRVGVPPRQLPSGAGHDAMMFDGLTETAMLFVRCGNSGVSH
                     SPREIVTAEDADIAARVVLDAVLQLAEAS"
     gene            3728..4978
                     /locus_tag="VIQ50_04095"
     CDS             3728..4978
                     /locus_tag="VIQ50_04095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018181697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEY9359591.1"
                     /translation="MKIPQVIAAFVDREFPRETQFLAELVKVPSDNPPGDCATHAERT
                     RRLLEQLGLAVEAHDVPRAIVEAAGMTSATNLIVRQRFGDGPVVALNAHGDVVPPGLG
                     WRHDPYGAIIEDGPHGPVMYGRGVAVSKSDFATYTWALLALRAAAAEGATLDGTLELH
                     FTYDEEAGGILGPKWLLAQRLVRPDIAIAAGFSYAVVTAHNGCLHLEVTVTGRQAHAA
                     MPTAGIDALEAANSILSALYAHRTTLSRIRSATAGIASPTLNVGLIKGGINTNVVPDQ
                     VAFRIDRRVIPEEEAAEVEAELRALIANCARHNPQIKVEVRRLLLAEPLRARPGTERI
                     AAALQFRAKEVLGVEVPTAGVPLYTDARHYAAAGIPTVLYGAGPRSIGEANAHNADEN
                     LRLGDLRAATKIVAMAVADLVGAR"
     gene            complement(5038..>5745)
                     /locus_tag="VIQ50_04100"
     CDS             complement(5038..>5745)
                     /locus_tag="VIQ50_04100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HEY9359592.1"
                     /translation="EKLHRGEPIRRCLACNTCINEMRGGARIGCVVNAAAGRESTFAD
                     SSPPRAERIAVIGAGPAGLTYASLVTEGNDVTVFEKEARAGGAFHYAGKAPLFQEVVA
                     SDTSFARYIDDLVAACSDKGVKFRWRCDVAAEPRVLAPFDRVVIATGASYRFGLGPIA
                     TKMLDWGVARWPLLSRLFSTATFRHWFYYRARRGTAERFRQFAKPEQRVVAIGDAVAA
                     GKSKEAIASAFEAALLG"
BASE COUNT         1022 a         1844 c         1927 g          952 t
ORIGIN      
        1 cggcggcacg atcggcagcg cgcgcgtggc cgccgctaac ccggacggct atacgttgct
       61 cgccggcagc atgggctccc acgtcgctgc acccgtgctc acgccgaacg tgaagtacga
      121 ctccgagcgc gatatcgagc cgattggctt cacggcgcac gcgccggccg tggtcgtcgc
      181 aaacaaggat tttccggcca aggatctgcg ggatttcgtg gcctacctga agaagcaggg
      241 cgagagcgtc aaacaggcgc atggcggcat cggctcatcg tcgcatatgg catgtctgct
      301 gttcgcgtcc gcggctgggg tgcggccgac gctggtggca taccgcggca cgggcccggc
      361 gctgaacgac ctcatcggcg gacatgtcga tttcttctgc gagcaggcgg tcagcgttgc
      421 tccgcaaatc acttctggta cgatcaaggc ctacggcgtc tcctccagcc agcggctggt
      481 ggcgctgccc gaggtgccga cggcccagga ggccggcgtc gactatcaga tgagtatttg
      541 ggccggaatt ttcgccccca aagggacgcc gaagccgatc atcgataagc tcgcgggtgc
      601 gctcgaccag gcactggacg acccgggcgt tcagacccgg ctgaccggcc tcggcggatc
      661 gatgccgagc aagagcgagc gtgcacccgg gaagttcagc gacttcgtaa aggcggagat
      721 cgcgcgctgg tcccccatcc tcaaggcggc gaacaccgag gggaagtaac gactggaaaa
      781 aaccgagcca ttgcttcccc gcccgcacct tgcgcttatc cgtccggatc gctcgccgaa
      841 ccttcagtac acggtccagt gcgaaggccg gtagatgatt tcccgcgtct cgatggacgc
      901 agccgactgg gcctccggcg ccctcgccca cggtttgatg gtcaggatgg tcactgccac
      961 cgcaacggcc atccagaaga caagtgccac tctcgttctg gctgccatgt ccgcctcctg
     1021 atgccacccg acatcattct ccgcagtgcg gaccctagcg gggaacgcga aagagctctg
     1081 tgagcccgct tacatttgct cgaaaatagt gctcggtgcg accgcgagcg gggacggcga
     1141 ggttcaaaag accgggtaag cggggcgcat cactgcgccg gagcgccggc cgcaagccag
     1201 gtggcaatga gcccgcgctc ttgtgcggtc atcgccgtga cgttgcccgg cggcatggcg
     1261 ttcgagcgca cggcgttgac ctcgatcagg cgggcgtgtc ggcgaatgct gtcgggatca
     1321 tcgagcacga cgcccttggg cggcgtgtgc acacccggcc acaccggctc gctgcggtgg
     1381 cacatgctgc agcgcgcgag gatcgcattt tgcgccgcct tgacatcgag gcgatcggcg
     1441 cgcgagccga tgtccgcggg tccggcagcc gacagccatg ccacggcgag catgccggca
     1501 gcagccacgc cccacgtcca ccaggggctc cctttgccct cgtgtcggga attgaagaag
     1561 tgccggatga ccggaccaac cgctaggacg atcgccacga tcagccagtt gaagcgggtc
     1621 gcgaacatca gcgggtaatg attggcgatc atcaggaaca cgaccggcag cgtgagatag
     1681 ttgttgtgga ccgagcgctg cttggcctgc tcgccccatg cggcgttggg ctccttggcg
     1741 gcgagcagcg ccgcgaccgt cttcttttgg ttcgggatga cgatgacgaa cacgttcgcc
     1801 accataatcg tgccgatcag cgcgccgatc tgagtaaagg cgccgcggcc gctgaataca
     1861 tgcgtgaagc cataggtgag cccgacgaga aagacgtatc ccaccagggc aagcgcgacc
     1921 tcgtgacggc cgagcgcgga gcggcatagc gcctcgtaca tgagccaggc aagcgcgagg
     1981 ctcacgaagg cgatggccgt ggcagtcggc gccgtcaggt tgagcacgga tttgtcgatg
     2041 aggtagagct ccgcgcccag atagtagacg atgacgagga gggcgaagcc ggagagccag
     2101 gtggtataag cctcccactt gaaccaggtg agctcgtccg gcatgcgggc aggagcgatg
     2161 agatacttca ccatgtgata gaagccgccg ccgtgcacct gccaagcgtc cccctggacg
     2221 ccctgcggta ggccggagcg cggcttgagg ctaagatcga gatggatgaa ataaaatgaa
     2281 cttccgatcc aagcgatggc ggcgacgacg tgcagccagc ggatgaggag gctcgaccac
     2341 tcggtgagta ccgcaaccac gcagagtccc ttctttcctc gttcgcattt cggtgagccg
     2401 cggcaagatg acagagacgt gttccagctt gcaagggctg cgccggccaa ccgtgtgtgg
     2461 atatgatgat cgaagcggca actaggaccg gcggcgagcc gggcgccttt ggcgagcgca
     2521 tcatggagct tgccgagcgg ctcgcgcaat ggtcagaaag cactgacggc ttgacctgca
     2581 cttatctgtc gccggcgcac cgcgcggtcg cagcggaaat cggcgacttg atgcggcgcg
     2641 caggactcat caccgagatc gacgcggtcg caaatgtcgt tggacgctac cccacgcgcg
     2701 accaagcggc gcgggcccta atccttgcct cgcactacga cacggtgcgc aacgccggta
     2761 aatacgatgg acggctcggc gtcctcaccg cgctggtggt ggcagagcac ctcaagcggc
     2821 tggaccgcaa attgccgttt cacctcgacg tcatcgcatt ctcggaagaa gagggcgtgc
     2881 gtttctcgtc gagcttcctc ggcagctgtg cggtggcggg acggttcgac agcaagctgc
     2941 ttgaacgccg cgacgccggc ggtgtgagct tggcggcagc catgcgcgag gcgggtctcg
     3001 atccgggaaa aattcccgcg ctagggcgcc gccgcgagga gctcgtggga tatctcgagg
     3061 tccacatcga gcaaggtccg gtcctgctcg aagagaggct ctcggcaggt attgtgagcg
     3121 cgattgcggg ctcggttcgc atgatgatta cggtcaccgg caccgctggc catgccggca
     3181 ccgtgccgat ggcgcggcgg cacgacgccg ccgcggccgc ggccgagctc ctgctctacg
     3241 ttgaaaagcg ctgtgcgcag gcgcccacgc tcgtcggcac ggtgggtcag cttggggtgc
     3301 ccgacggcgc catcaatatc attccggggc gttgcgagct cacgctcgac gttcgcgctg
     3361 gcgacgacgc cacgcgcgat gcggccatgt ccgacatcat ggcggagatc gaccgcatag
     3421 ccgcgagacg gggtgtcagt ttcgactgca gggaagtgca gcgcaccgcg gccgtgcgat
     3481 gctcgtcgca cctgcagtcg gtgttgtccg acgccctgac gcgggtcggg gtgccgccgc
     3541 gccagcttcc gagcggcgcc ggccacgatg ccatgatgtt cgacggcctt accgaaacgg
     3601 ccatgctgtt cgtgcgttgc ggaaacagcg gtgtcagtca ctctccgcgg gagatcgtca
     3661 ccgccgagga tgccgatatc gccgcacgcg tcgtgctcga cgccgtgctg cagctcgcgg
     3721 aagcgtcatg aagattccgc aggtcatagc cgcgttcgtt gatcgcgagt tcccgcgcga
     3781 gacgcaattt ctcgccgagc tcgtgaaggt gccgagcgac aacccgccgg gcgattgtgc
     3841 gacacatgcg gagcgcacgc ggcgacttct ggaacagctt ggtctcgcgg tcgaggcgca
     3901 tgacgtgccg cgcgccatag tcgaggccgc cggtatgacg agtgcgacga acctcatcgt
     3961 ccgccagcgc ttcggcgatg gcccggtcgt cgcgctcaac gcccacggcg acgtggtgcc
     4021 gcccggtctc ggatggcgcc acgatcctta tggggcgatc atcgaggacg ggccacacgg
     4081 cccggtcatg tacggacgcg gcgtggcagt gtcgaaatcc gatttcgcga cctatacctg
     4141 ggcgctgctg gcgttgcggg cagcggctgc agaaggcgcc acgctcgatg gaacgcttga
     4201 actgcatttc acctatgacg aggaggccgg cggaatcctc ggcccgaaat ggctgctcgc
     4261 tcagcgcttg gtgcggcccg acatcgcgat cgccgccggc ttttcctacg cggtggtcac
     4321 tgcacacaac ggctgtctgc atctggaggt gacggtcacg gggaggcagg cgcacgcggc
     4381 tatgcccacg gccggcatcg acgctctcga agccgccaac tcgatccttt ctgcgctcta
     4441 tgcgcatcgc acgacgctat cgcgcatacg ctccgcaacg gcgggcatcg cctcgccaac
     4501 gctcaatgtc ggtctgatca agggcggcat caacacgaac gtggtgccgg atcaggtcgc
     4561 ctttcgcatc gataggcgcg tgatcccgga agaggaggcg gcagaggtcg aggcggagct
     4621 gcgcgcgctg atcgcgaatt gcgccagaca caatccgcag atcaaagttg aggtgcgccg
     4681 gctgctcttg gccgagccgc tgagagcgcg cccgggtacg gagcggatcg cggccgcgct
     4741 tcaattccgc gccaaggaag tgctcggcgt cgaagtgccg accgccggcg tgccgcttta
     4801 taccgacgcg cgccattacg ccgcggcggg cattccgacg gtgctctacg gcgctggtcc
     4861 gcgctcgatc ggcgaagcca acgcgcataa cgccgacgag aatctgcgcc ttggcgatct
     4921 gcgcgctgcg accaagatcg tagccatggc ggtcgccgat ctcgtcgggg cgcggtgaca
     4981 ggcgtcggga ttttgatctt gtccttctcc ggcgtgggca aagcccgccg actagattca
     5041 tcccagcagc gcggcctcga atgcgctggc gatcgcttct ttgctcttgc ccgccgccac
     5101 cgcatcaccg atggcgacga cgcgttgctc cggtttcgca aactgccgaa aacgctcggc
     5161 cgttccgcgg cgcgcccggt aatagaacca gtggcggaac gtcgctgtgg agaaaagacg
     5221 cgagaggagg ggccaacggg cgacgcccca gtcgagcatc ttggttgcga tcggcccgag
     5281 cccgaagcga taactggcac cggtagcaat cacgacgcgg tcgaagggcg cgagcacccg
     5341 cggctcggcg gcgacatcgc accgccagcg gaatttgacg cccttgtcgc tacatgcggc
     5401 gacgaggtca tcgatatatc gcgcgaagct cgtatcgctc gccacgacct cttggaacag
     5461 cggcgcctta ccggcataat ggaacgcccc gcccgcgcgc gcttcctttt cgaacaccgt
     5521 cacatcgttt ccctcggtca ccagcgaggc ataggtcaag ccggcggggc cggcgccgat
     5581 cacggcgatg cgctcggcac gcggcgggct cgaatcggca aacgtgctct cgcggccggc
     5641 ggcagcgttg accacacagc cgatgcgcgc gccgccgcgc atctcgttga tgcaggtatt
     5701 gcaggctaga cagcggcgga tcggctcgcc gcggtggagc ttctc
//
LOCUS       DATCWM010000210         3622 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_77399, whole genome shotgun sequence.
ACCESSION   DATCWM010000210 DATCWM010000000
VERSION     DATCWM010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3622)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3622)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3622
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77399"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..821
                     /locus_tag="VIQ50_04105"
     CDS             <1..821
                     /locus_tag="VIQ50_04105"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HEY9359593.1"
                     /translation="VELAQAAVQQAQANVQHAQAQIAVQQAQINASQAQVEQAKASLV
                     FAQQQAVRYGELAEKGYGPVQSAQQFSAEQREKQAAVETAEANLKLAQRQIDTLNAQL
                     ASAQANLAQANAQRDQAKVNLDRTKIHSPVNGWVTNLLAQLGDYANVGQIKLTLVDAD
                     SFWVDAYFTETALGAIREGDPAKLKLMGYNDVVRGHVDSIARGINVSNAEAGPGGLAT
                     VNPIFTWVRLAQRIPVRIHIDHVPKDIVLAAGQTVTVEIEHRARRSRDAPQTPR"
     gene            832..2190
                     /locus_tag="VIQ50_04110"
     CDS             832..2190
                     /locus_tag="VIQ50_04110"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: protein motif:HMM:NF006696.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HEY9359594.1"
                     /translation="MDPATSALLTDLYQLNMMQAYLDRGETKTAVFEFFVRKLPRDRG
                     FLIAAGLEQVLEFLDGLRFTPEELDWLAAGGRFGKNLLDYLAGLRFTGDIHAMPEGTV
                     FFADEPILRVTATLPEAQLIETRVINLLQFQTMIAAKAARMVLAAPGKRLVDFGLRRA
                     HGAEAGLMAARASYIAGFAGTATVLADKRFGIPIFGTMAHSYVQIHDDEAQAFENFAR
                     ARPKNLILLIDTYDTEAAARKVVALAPRLKGAGIAVAGVRLDSGDLIALSRSVRRILD
                     DGGLTDVTIFASGGIDETTIANIIRSGAPIDGFGIGSSLTTSSDAPGLDCVYKLEEYA
                     GLPRRKRSAGKATWPGRKQVWRRFEPDGRMAADVLSVEDDAQQGELLIELVMQGGKHL
                     KPAPTLAEIRARAARELERLPEPLRRLEPAASYPVEVSDGLRRLAVEVDGRMALQQRA
                     KR"
     gene            complement(2207..3007)
                     /gene="modA"
                     /locus_tag="VIQ50_04115"
     CDS             complement(2207..3007)
                     /gene="modA"
                     /locus_tag="VIQ50_04115"
                     /EC_number="7.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003601833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEY9359595.1"
                     /translation="MITRRTLLALLVAVGLAWTAQVQSVSAQGKDVVIFAAASLKNAL
                     DDIAGQWQRETGKKVVVSYAASNTLIKQIEQSAPADIFISADLDWMDYGQQKDLIKLD
                     SRSNLLGNRLVLIAPKDSSVSANIQPGFDLAALLKGGRLAMGNVDAVPAGKYGKASLE
                     KLGVWDSVKDKIAQAETVRAALLFVSRGEAPLGIVYQPDAAADPGVKIVGTFPENTHP
                     PIIYPVALTKESANADAQAFLNYLRSPAARAAFERQGFAVLGPGGQRS"
     gene            3091..>3622
                     /gene="pncA"
                     /locus_tag="VIQ50_04120"
     CDS             3091..>3622
                     /gene="pncA"
                     /locus_tag="VIQ50_04120"
                     /EC_number="3.5.1.-"
                     /EC_number="3.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nicotinamidase/pyrazinamidase"
                     /protein_id="HEY9359596.1"
                     /translation="MPTAIADSDVLLVVDVQNDFCPGGKLAVPHGDEVVAPINRLAGR
                     FRHVVLTQDWHPPGHRSFASSHPGKRPFETVAVDYGQQILWPDHCVQGTVGAQFHDGL
                     QIPHAELVLRKGFRPTIDSYSALYENDRKTPTGLAGYLRERGLTRIFIAGLAFDFCVR
                     YSAEDARREDFAVTVIA"
BASE COUNT          657 a         1199 c         1136 g          630 t
ORIGIN      
        1 ccgtcgagct cgcgcaggcg gcggtacagc aggcgcaagc caacgtgcaa cacgcccagg
       61 cgcagatcgc cgtgcagcag gcgcaaataa acgcgagcca agcgcaagtg gaacaggcga
      121 aggcctcgct cgtattcgcc cagcaacagg cggtgcgcta cggggagttg gcggaaaaag
      181 gctacggccc cgttcaaagc gcccagcaat tcagcgccga gcagcgagag aaacaggcgg
      241 cggtcgagac cgcggaggca aacctcaagc tcgcgcaacg gcagatcgac acgttgaatg
      301 cgcagctcgc cagcgcccag gcaaacctgg cacaggcgaa tgcccagcgc gaccaggcca
      361 aggtcaatct cgatcggacg aaaatccact cgccggtcaa cggctgggtg accaacctgc
      421 tcgcgcagct cggcgactac gcgaatgtcg ggcagatcaa gctgacgctg gtcgatgccg
      481 attccttctg ggtcgatgcc tacttcaccg agaccgcgct gggcgccatc cgcgagggcg
      541 atccggccaa gctcaagctg atgggctaca acgacgtggt ccgcggccac gtcgacagca
      601 tcgcgcgcgg catcaacgtt tccaacgcgg aagccggccc gggaggcctc gcgaccgtca
      661 acccgatctt cacctgggtg cgcctggcgc aacgcatccc ggtgcgaatc catatcgatc
      721 acgtacccaa ggacatcgtt ctcgccgccg gtcagaccgt caccgtggaa atcgagcatc
      781 gcgcgcgccg cagccgcgac gcgcctcaga cgccgcgtta gagttggcag catggatccg
      841 gcgacaagcg cgttgctgac cgatctctac caactcaaca tgatgcaggc gtacctggat
      901 cgtggcgaga cgaagaccgc ggtcttcgag ttcttcgtgc gcaagcttcc gcgcgaccgc
      961 ggcttcctga ttgcggccgg cctcgaacaa gtgctcgagt ttctcgacgg gctgcgcttt
     1021 acgcccgagg agctggattg gctcgcggcg ggcggccggt tcggcaagaa tttgctcgat
     1081 tatctcgccg gcctgcgctt caccggcgac atccacgcca tgccggaagg gacggtgttc
     1141 ttcgccgacg aaccgatcct gcgcgtcacc gccactttgc ccgaggcgca gctcatcgag
     1201 acgcgcgtga tcaatctcct gcagttccaa acgatgattg ccgccaaggc ggcgcgcatg
     1261 gtgcttgccg cgccgggcaa acgcctcgtc gacttcggcc tgcgccgcgc gcacggcgcg
     1321 gaggccggac tcatggccgc tcgcgcgagc tacatcgccg ggtttgccgg caccgctacg
     1381 gtgttggccg acaagcgctt cggcatcccg atcttcggca ccatggcgca ttcctacgtg
     1441 cagattcacg acgacgaggc gcaggcgttc gagaatttcg cccgcgcccg acccaaaaat
     1501 ctgatcttgc tcatcgacac ctacgacacc gaggccgcag cgcgtaaagt cgtcgcgctc
     1561 gcgccgcgac tcaaaggagc cggcatcgcg gtcgccgggg tgcgtctcga cagcggcgat
     1621 ctcatcgcgt tgtcgagatc ggtgcggcgc attctcgacg acggcggact taccgacgtg
     1681 acgatcttcg ccagcggcgg catcgatgag accacgatcg cgaatatcat ccgatccggc
     1741 gcgccgatcg acggcttcgg catcggcagc agcctgacca cctcgtccga cgcgcccggt
     1801 ctcgattgcg tgtacaagct cgaagagtat gccggcctgc cgcgacgcaa gcgctccgcc
     1861 ggcaaagcga cctggccggg gcgcaagcag gtgtggcgcc gctttgagcc ggacgggcgc
     1921 atggcggcag atgtcctgtc cgtggaggat gacgcgcagc agggcgagtt gctgatcgaa
     1981 ttggtcatgc agggcggcaa gcatctcaag ccggcgccga cgcttgcgga gattcgtgcg
     2041 cgggcggcgc gcgagctcga gcgcctgccc gagcctttgc gccgcctcga gcccgccgcg
     2101 tcttatccgg tcgaggtcag cgacgggctg cgacgcctcg ccgtcgaagt cgacggacgc
     2161 atggcccttc agcagagggc gaagcgataa gcgctttccg atcgccttag gaccgctggc
     2221 cgccgggtcc cagcacggca aaaccctggc gctcgaaggc cgcccgcgcc gccggcgagc
     2281 gcagataatt caggaacgcc tgcgcgtcgg cgttggccga ttccttggtc agcgcgaccg
     2341 gatagatgat cggaggatgc gtgttctcgg ggaacgtacc gacgatcttg acgcccgggt
     2401 cggcagcggc atcaggttgg tagacgatgc cgagcggggc ttcgccgcgt gacacaaaca
     2461 gcagggccgc gcggacggtt tccgcctgcg caatcttgtc cttgacgctg tcccagacgc
     2521 cgagtttctc gagcgaggct ttgccatatt tgcccgccgg caccgcatcg acattgccca
     2581 tggcaagccg gccgcccttg agcagggccg cgaggtcgaa gcccggctgg atatttgcgc
     2641 tgacgctcga atccttcggc gcgatcagca cgagtcggtt gccgagcaga ttggaacggc
     2701 tgtccagctt gatcaggtcc ttctgctgtc cgtaatccat ccaatcgaga tccgcggaaa
     2761 tgaagatgtc cgccggcgcg ctctgttcga tctgcttgat gagcgtgttg ctggctgcgt
     2821 aggaaacgac cactttcttc ccggtctcgc gctgccattg tccggcgatg tcgtcgagcg
     2881 cgttcttcag gcttgcggcg gcgaatatga caacatcctt gccctgtgcc gagactgatt
     2941 gaacttgcgc agtccacgcc aatcccacgg cgacaagcag ggcgagcaaa gtccgtcttg
     3001 ttatcatcgt ggcgtccatt tgcgctatat tcctcaatgc agagttcgca accataacga
     3061 gattttcggc ctgttcaatc gggcgcgacc atgccgaccg caatcgcaga cagcgacgtc
     3121 ttattggttg tcgacgtcca gaacgacttc tgtccgggcg gaaagcttgc cgttccgcac
     3181 ggcgacgagg tcgtagcgcc catcaatcgt ctcgccggcc gcttccggca tgtggtcctg
     3241 acgcaggact ggcaccctcc cggccaccgc tcgtttgcat cctcgcaccc tggcaagcgc
     3301 ccgttcgaga ctgtcgccgt cgattacggg cagcaaattc tatggccgga tcattgcgtc
     3361 caaggcacgg tcggcgccca attccacgac ggtttgcaaa ttccccacgc cgagctcgtg
     3421 ctgcgcaagg gctttcgccc gacgatcgat tcctattccg ccttgtacga gaacgaccgc
     3481 aagacgccca ccggactagc tggttatctg cgcgagcgcg gtctcacgcg aatttttatc
     3541 gccgggctcg ccttcgactt ctgcgtccgc tactcggccg aagacgcgcg gcgagaggac
     3601 tttgccgtga ccgtcatcgc gg
//
LOCUS       DATCWM010000211         2980 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_498403, whole genome shotgun sequence.
ACCESSION   DATCWM010000211 DATCWM010000000
VERSION     DATCWM010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2980)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2980)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2980
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_498403"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..342)
                     /locus_tag="VIQ50_04125"
     CDS             complement(<1..342)
                     /locus_tag="VIQ50_04125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008131200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HEY9359597.1"
                     /translation="MNANLAAVLYLVAGVLFILSLRGLSSPASSRQGNFFGMIGMAIA
                     VATTLASHPPADGMAWLLVVLGIAIGGSIGAVIARRVPMTSMPELVAAFHSLVGMAAV
                     LVAAGAFYAPEA"
     gene            complement(386..703)
                     /locus_tag="VIQ50_04130"
     CDS             complement(386..703)
                     /locus_tag="VIQ50_04130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-translocating transhydrogenase family
                     protein"
                     /protein_id="HEY9359598.1"
                     /translation="MEHIAQAVDPFVFRLSIFVLAVFVGYFVVWSVTPALHTPLMSVT
                     NAISSVIVVGALLAVGVGMISSGSGWARGFGFVALIFACVNIFGGFLVTQRMLAMYKK
                     KVR"
     gene            complement(720..1844)
                     /locus_tag="VIQ50_04135"
     CDS             complement(720..1844)
                     /locus_tag="VIQ50_04135"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009398973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008746 - NAD(P)+ transhydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HEY9359599.1"
                     /translation="MKIAVAKEIDPSEPRVAASPDTVKKFKALGAEVAVEPGAGIKSG
                     LPDSEFTAAGATVSADALKDADIIIKVKRPEASELAQYKRGALVVAIMDPYGNEAALK
                     TIADAGVSAFAMELMPRITRAQAMDVLSSQANLAGYRAVIEAAEAFGRAFPMMMTAAG
                     TIPAAKVFVMGVGVAGLQAIATARRLGAVVTATDVRPATKEQVESLGAKFLAVEDEEF
                     KNAQTAGGYAKEMSKEYQAKQAALTAEHVKKQDIVITTALIPGRPAPKLVSAEMVKSM
                     KPGSVLVDLAVERGGNVEGAKPGEVVETDGVKIVGYTNVAGRVAASASGLYARNLLSF
                     IETLIDKTNKAVAVNWDDELVKATALTKDGAVIHPNFQPK"
     gene            complement(1950..2675)
                     /gene="phbB"
                     /locus_tag="VIQ50_04140"
     CDS             complement(1950..2675)
                     /gene="phbB"
                     /locus_tag="VIQ50_04140"
                     /EC_number="1.1.1.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015670118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018454 - acetoacetyl-CoA reductase
                     activity [Evidence IEA];
                     GO_process: GO:0042619 - poly-hydroxybutyrate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetyl-CoA reductase"
                     /protein_id="HEY9359600.1"
                     /translation="MARVALVTGGTRGIGAAISKALKAAGYKVAASYAGNDAAAEKFK
                     AETGIPVYKWDVSSFDDCAAGVKKVEADLGPVDVLVNNAGITKDGAFHKMTLDQWNAV
                     INTNLGSLFNMTRPVIEGMRARKFGRVINISSVNGQKGQFGQVNYSAAKAGDIGFTKA
                     LALENAKGGITVNAICPGYINTEMVQAVPKDVLEKSILPLIPVNRLGEPEEIARAVVF
                     LAADDAGFITGSTMTINGGQYQA"
     gene            complement(2880..>2980)
                     /locus_tag="VIQ50_04145"
     CDS             complement(2880..>2980)
                     /locus_tag="VIQ50_04145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359601.1"
                     /translation="LLHEMQKRNAKRGLATLCIGGGMGIAMCIARD"
BASE COUNT          550 a          963 c          893 g          574 t
ORIGIN      
        1 ggcttccggc gcgtagaacg caccggctgc gaccagtacc gcggccatgc cgaccagcga
       61 gtggaaggcg gcgaccagtt ccggcatcga ggtcatcggc acccggcgcg cgatgacggc
      121 gccgatagag ccgccgatgg cgatgccgag cacgaccagc agccatgcca tgccgtcagc
      181 cggcggatgg ctggcgagcg tggtcgcaac cgcgatcgcc atgccgatca tgccgaagaa
      241 attgccctgg cgagaagagg cggggctgga cagcccgcgc agcgacagga tgaacagcac
      301 acccgcaacg agataaagaa ctgcagccag attggcgttc atctcaggtc cccatttgcc
      361 tttgtcacca cgaggtgcac gccgctcacc ttaccttctt cttgtacatc gccagcatgc
      421 gctgggtgac aaggaagccg ccaaagatgt tcacgcaggc aaagataagc gcgacgaagc
      481 cgaagccgcg cgcccagcct gagccgctcg agatcatgcc gacgccgacg gcgagcagcg
      541 cgccgaccac gatcaccgac gagatcgcgt tggtgaccga catcagcggc gtatgcagcg
      601 caggcgtcac cgaccacacc acgaaatagc cgacgaatac ggcgaggacg aaaatcgaca
      661 gccggaatac gaacggatcg acggcctgcg cgatatgctc catggcttct ctcctgaaat
      721 tacttcggct ggaagttggg gtggatgacg gcgccgtcct tggtcagcgc ggtggccttc
      781 accagttcat cgtcccagtt gaccgcaact gccttgttcg tcttgtcgat cagcgtctcg
      841 atgaaggaaa gcaggttgcg cgcgtaaagc ccggaggccg acgccgcgac gcgcccggcg
      901 acattggtgt agccgacgat cttgacgcca tcggtttcga caacctcgcc gggcttggcg
      961 ccctcgacat tgccgccgcg ctccacggcg agatcgacca gcaccgaacc cggcttcatg
     1021 gacttgacca tctcggcgct gacgagcttt ggcgccggcc ggccgggaat cagcgcggtc
     1081 gtgatcacga tgtcctgctt cttgacatgc tcggcggtga gcgcggcctg cttggcctgg
     1141 tactctttcg acatctcctt ggcgtagccg ccggcggtct gcgcgttctt gaattcctcg
     1201 tcctcgaccg caaggaattt ggcgccgagg ctttccacct gctccttggt cgcgggccgc
     1261 acgtcagtcg cggtgacgac ggcgccaagc cgccgcgcgg tagcgatcgc ctgcaagccg
     1321 gcgacgccaa cgcccatcac gaacactttt gccgcgggaa tcgtgccggc ggcggtcatc
     1381 atcatcggaa aggcgcggcc gaaagcttcc gcggcctcga tcaccgcgcg atagccggcg
     1441 aggttcgcct gcgacgacag cacgtccatt gcctgggcgc gggtgatgcg cggcatcaat
     1501 tccatcgcaa acgccgacac gccggcatcc gcaatcgtct tcagcgcggc ctcattgcca
     1561 tatgggtcca tgatggcgac caccagcgcg ccacgcttgt actgcgccaa ctcgctggcc
     1621 tcgggccgct tcaccttgat gatgatgtcg gcgtccttca gcgcatcggc gctcaccgtg
     1681 gcgcctgccg cggtgaattc cgaatccggc aggccggatt tgatacccgc gccgggctcg
     1741 acggccactt cggcgcccag cgccttgaat ttcttcacgg tgtcggggga agcggccacc
     1801 cgcggctcgg acggatcgat ttccttggca acggcaatct tcatgacatt tcccaaatca
     1861 gggacttctg ggtttgctgc agcaaaccca ttcgcgatag cgaataaaga tcagcagata
     1921 gcaataattg cttcgattgg gcggtcaaat cacgcctgat actgcccgcc gttgatcgtc
     1981 atcgtcgagc ccgtgatgaa gccggcatcg tcggcggcga gaaagacgac cgcgcgggcg
     2041 atctcctcgg gctcaccgag gcgattgacc gggatcaacg gcaaaatgct cttttccaga
     2101 acatccttcg gcaccgcctg caccatttcg gtgttgatat agccggggca gatcgcgttc
     2161 acggtgatgc cgcccttggc gttctcgagc gcgagcgcct tggtgaagcc gatatcgccg
     2221 gccttggcgg ccgaataatt cacctggccg aactggccct tctggccgtt gaccgaggag
     2281 atgttgatga cgcggccgaa tttgcgggcg cgcatgccct cgatcaccgg gcgcgtcatg
     2341 ttgaacagcg agccgagatt ggtgttgatg accgcgttcc actgatcgag cgtcattttg
     2401 tggaaagcgc cgtccttggt gatgccggca ttgttgacga gcacgtccac cggaccgaga
     2461 tcggcttcga ccttcttgac gccggcggca cagtcgtcga acgaactgac gtcccattta
     2521 tagacgggga tgccggtctc ggccttgaac ttctcggccg cagcgtcatt gccggcgtag
     2581 ctcgccgcca ccttgtagcc tgccgctttc agcgccttgc tgattgcggc gccaatgcca
     2641 cgggtaccgc ccgtcaccaa tgcaacacgt gccatgcttt cctcctcctt ggacgcctct
     2701 tatgggccgg aattgtcccc ggtcttttga cgaagttcaa tcttcgcctt tgaagcgctc
     2761 ttgaacgctt cggagacaaa aatgctcggc gcgagaccgg gcattcccat tttttaccag
     2821 cttgcgccgc ggttgacaga tgatcttttc atcattcaac cgatcacgct gccttttgtt
     2881 cagtcgcgtg cgatgcacat cgcgatgccc atgccgccgc cgatgcacaa cgttgcaagc
     2941 ccacgcttgg cgttccgctt ctgcatttca tgcagaaggg
//
LOCUS       DATCWM010000212         3943 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_476821, whole genome shotgun sequence.
ACCESSION   DATCWM010000212 DATCWM010000000
VERSION     DATCWM010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3943)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3943)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3943
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_476821"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            113..346
                     /locus_tag="VIQ50_04150"
     CDS             113..346
                     /locus_tag="VIQ50_04150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359602.1"
                     /translation="MADRRDELKETAAQCLALAHATTDARTRAALLTMAQKLNNQASQ
                     RVHDYEAAQREFNDRQMLPQPTVQQKIQPKKDG"
     gene            complement(356..772)
                     /locus_tag="VIQ50_04155"
     CDS             complement(356..772)
                     /locus_tag="VIQ50_04155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009797271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4112 domain-containing protein"
                     /protein_id="HEY9359603.1"
                     /translation="MTNSYARDSYAYGFDFTRTRTREERVARLDVLANLLDTAFILPG
                     TNVRFGFDALIGLVPGIGDAITTAISLYIVLEARQLGAPAHLILRMLANVVVDGFVGA
                     VPLVGDAFDVLWRANRRNVLLLREWLAREDAYWRRG"
     gene            982..1245
                     /locus_tag="VIQ50_04160"
     CDS             982..1245
                     /locus_tag="VIQ50_04160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014492603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359604.1"
                     /translation="MPGGWIAVLVLCVLLVASAYLFYEGWTAHSGGIELPDWGYALLG
                     VGVIFGLVIGCGLMALAFYSSRHGFDEPTAAKQDDDRQRDDPR"
     gene            1360..1614
                     /locus_tag="VIQ50_04165"
     CDS             1360..1614
                     /locus_tag="VIQ50_04165"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEY9359605.1"
                     /translation="MRECRALRALADGRAESAAQGAGVALLPVAMFERELSLGRLVQP
                     FDLEVSIGSYWLTSLKSKAESDAMRAFRLRVVAEAANSQA"
     gene            complement(1655..2098)
                     /locus_tag="VIQ50_04170"
     CDS             complement(1655..2098)
                     /locus_tag="VIQ50_04170"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEY9359606.1"
                     /translation="MDAKQPVKIRLARRFGVPPRRVFEAWTDSKAAGRWLFGAGASIC
                     VEIDARVGGWFYVAGRRNGAMAEYVGEYLEVVRPHRLVFALLAEKYSLNFEQVTVLFD
                     PRGTGCELSLIHETRLEFAQQAQRDWAKVLDRLAGMLTASGRDAA"
     gene            2519..3412
                     /locus_tag="VIQ50_04175"
     CDS             2519..3412
                     /locus_tag="VIQ50_04175"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEY9359607.1"
                     /translation="MTDLALSTTSMPQVALTPPAIAQRHGADWGLIRPEQVDVIRHEP
                     FDYEFKGPRHLLIASERAERDDGETLLDGLPRSNRREWNHKMTFVPAGRRFYGWQKPH
                     SLLRSTFLYIDPRSPLLAELGFAEIDFRPRLFFFDGDVWTTVLKLKAQLEHPCRSQSI
                     YVDALGIALAHELMRVNDGGSTAARGLRGGLPSWQQKKLAQYIDAHLADEISLASLAR
                     EARLSPFHFSRAFKQSFGMPPHRYLTSRRIERAKALLAERTLSVTEIGLGVGFSETSS
                     FTAAFRKLTGETPTEYRRTLA"
     gene            complement(3503..>3943)
                     /locus_tag="VIQ50_04180"
     CDS             complement(3503..>3943)
                     /locus_tag="VIQ50_04180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359608.1"
                     /translation="VGLGSADHAQMAAIMASGAASAEAERAAIGRTEAWFERRIAPIT
                     GTAQRVARAGPLIGLGGQRGQFDCIDTTNNTNSLLLVLDELKLLRHHTIAAPVSRFWF
                     TEGPHNTAVIRDSKTGELWTVDPWTHKGSEVPDIFPLAKWKAGD"
BASE COUNT          703 a         1287 c         1288 g          665 t
ORIGIN      
        1 aatcggcgcg tgtgtgatgc cggtcacagc ggcggtgcgc ctgtgctggc acactcgcca
       61 aagcccggct cccgggcgcg tcgggattgc cagcggcgga aggctttagc ccgtggcgga
      121 cagaagagac gagctgaaag agaccgcagc gcagtgcctg gcgctggcgc atgcgaccac
      181 cgatgcgcgc acgcgcgcgg cgctgctcac catggcgcaa aagctcaaca accaggcaag
      241 ccagcgggtg cacgactacg aggcggcgca gcgcgagttc aacgaccggc agatgctgcc
      301 gcaaccgacc gtgcagcaaa agatccagcc gaagaaagac ggctagcagc gcaagctatc
      361 cgcgccgcca atacgcgtct tcccgcgcca gccactcgcg caagagcaag acgttgcggc
      421 gattggcacg ccacagcacg tcgaacgcgt cgccgacgag cggcaccgcg ccgacgaacc
      481 catcgacgac gacattggcg agcatgcgca ggatgagatg agccggcgca cccagctggc
      541 gcgcctcgag cacgatatag agcgagatcg cggtggtgat cgcgtcgccg atgcccggta
      601 cgaggccgat cagcgcatca aagccaaagc gcacattggt gccgggcaga atgaacgccg
      661 tatcgagcag attcgccagc acatcgaggc gggcgacgcg ctcctcgcgc gtgcgcgtgc
      721 gcgtgaaatc gaacccgtag gcgtagctgt cgcgggcgta gctgttggtc atgggcgtcc
      781 tccgtcgccc aaatagggac gccatcccca atgcgcaacc gcgcctgcgc caagttccac
      841 cagcgcgcag acgcagcgcg ggagggacgt cgaggccggt gttcagtccg gctctttaag
      901 ccggtctttc tttaccccgg tcttgccaac gacgcagcga tgggagaaac ccagtgcacg
      961 ctgatacgcg aggaatgaca gatgcccggc ggctggatcg cggtccttgt cctttgcgtg
     1021 ctgctcgtcg cctccgcata cctcttctac gaggggtgga ccgcccactc cggcggcatc
     1081 gaattgccgg attggggcta cgcgctgttg ggcgtcggcg tcatcttcgg cttggtgatc
     1141 ggctgcggcc tgatggcgct tgccttctac agcagccggc acggcttcga tgagccgacc
     1201 gcggcgaagc aagacgatga tcgccagcgc gacgatccgc gttgaatgcg aattcggtgt
     1261 tcctgcccgc aatcggccac cgcaaagaag cgcctgagca aaccgcggtc gagccgaatt
     1321 tcccgagcga aagcgtcgct cgtttagcgc gtcagcggcg tgagagaatg ccgagctttg
     1381 cgagcccttg ccgacggcag ggccgaatcg gcggcgcaag gcgcgggcgt cgcgctccta
     1441 cctgttgcca tgttcgaacg ggaattgtca ttgggccgtc tggtccagcc gttcgatctc
     1501 gaggtatcga tcggcagcta ttggctcacg tcgctcaagt cgaaggcgga gagcgatgcc
     1561 atgcgggcgt ttcgtttgcg ggtcgtggcg gaggctgcga atagtcaggc gtaagttacc
     1621 cggtcgcgtg tagcggcgat caaggcgcag gatttcaggc tgcgtcgcga ccgctcgcgg
     1681 tgagcatgcc ggcgaggcgg tcgagaacct tggcccagtc gcgctgcgcc tgttgcgcaa
     1741 attccagtcg cgtctcgtgg atcaagctga gctcgcatcc cgttccacgc ggatcgaata
     1801 gaaccgtcac ctgctcgaaa ttaagcgaat atttctcggc gagcagcgca aacaccagtc
     1861 ggtgcggccg cacgacttcg agatattcgc ccacgtactc ggccatcgcg ccgttgcgtc
     1921 gccctgcgac gtagaaccag ccgccgacgc gggcatcgat ttccacgcaa atgcttgcgc
     1981 ccgcgccgaa cagccatcgt ccagccgcct tcgagtcggt ccaggcttcg aagacgcgcc
     2041 gcggcggcac gccgaagcgg cgcgcgaggc gaattttgac cggttgcttt gcgtccatgt
     2101 cgatcatccc aagcggaggg ctaaaccccg gccctgccat ggattcagcc actggcattg
     2161 tgcgctctcc gtcgcggctg catgcgcaac taaagttgaa tccgcgcgcc tcaaatcgga
     2221 cacgattcga agcgggatct cgccgtggtc gcccgcgcgc catcgtgggc aaaccccatt
     2281 cgagatcgtg cagagcgtat tcgagtatcg acgaggaggc ttgtgcggtt ttgccaattt
     2341 gtctcgatct tgcggaatgt tgatatcccg cggacggatc ggccggcgtc gagctgcgca
     2401 aggcgatcgc gtgccgcgcc agtgaaggcc aaagacagaa cgccgctgcg acggcgcgat
     2461 ccttaggcga gggtgctccg agggtagact ggtagggtaa gcgcacaaga gacggaccgt
     2521 gactgacctc gctctttcga cgacaagcat gccgcaggtt gcgctcaccc cgccggcgat
     2581 cgcccagcgc cacggcgccg attggggact gatccgaccc gagcaggtcg acgtcattcg
     2641 gcatgagccg ttcgactacg aattcaaggg accgcggcac cttctcatcg catccgagcg
     2701 cgccgagcgc gacgacggcg aaacgctgct cgatgggttg ccgcgatcga accgccgcga
     2761 atggaatcac aagatgacat tcgtcccggc ggggcgccgg ttctacggct ggcagaaacc
     2821 gcacagcctg ctgcgcagca cgttcctcta catcgacccg cgcagcccgc tgctcgccga
     2881 gctcggcttc gccgaaatcg acttccggcc gcgattgttc ttcttcgacg gcgacgtttg
     2941 gacgaccgtg ctgaagctca aggcgcagct cgagcatcca tgccgatccc agagcatcta
     3001 tgtggacgcg ctcggcatcg ccctggcgca cgagctcatg cgcgtgaacg atggcggctc
     3061 gaccgccgcc cggggactac gcggagggtt gccctcctgg cagcagaaga agctggcgca
     3121 gtacatcgac gcgcatcttg ccgacgagat ctcgctcgca tccttggctc gagaagcgcg
     3181 gctgagcccg ttccatttct cccgcgcgtt caagcagtcg ttcggcatgc cgccgcaccg
     3241 gtatctcacg agccggcgca tcgagcgcgc caaggccttg ctggccgagc gcacgctgtc
     3301 ggtgacggag atcgggctcg gcgtcggctt cagcgagacg agctcgttca ccgccgcgtt
     3361 tcgcaagctc accggcgaaa ccccgaccga gtatcgccgc accctcgcct agagcgagcc
     3421 gcgatgccgt aacgcgtcat gggcggactt ggtccggcca tccacgtctt tgcaacggcc
     3481 gtcacggctc tggctcttgc tctcagtcgc cggccttcca ctttgccagc gggaagatgt
     3541 cgggcacctc gctccctttg tgcgtccagg gatcgacggt ccacagctcg cccgtcttgc
     3601 tgtcccggat taccgccgtg ttgtgcggac cctcggtgaa ccagaaccgc gacaccggcg
     3661 cggcgatcgt atggtgccgc agcaatttga gctcatcgag aacgagcagc agcgaattgg
     3721 tattgttggt ggtgtcgatg cagtcgaatt ggccgcgctg gccgccgagc ccgatgagcg
     3781 ggccggcgcg cgcgacgcgt tgcgcggtgc cggtgatggg ggcaatgcgc cgttcgaacc
     3841 acgcttcggt gcggccgatg gcggcgcgct cggcctccgc cgaggcggcg cccgaggcca
     3901 tgatcgcggc catctgcgcg tggtcggcgc tgccaagccc gac
//
LOCUS       DATCWM010000213         3753 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_147633, whole genome shotgun sequence.
ACCESSION   DATCWM010000213 DATCWM010000000
VERSION     DATCWM010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3753
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147633"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..531
                     /locus_tag="VIQ50_04185"
     CDS             <1..531
                     /locus_tag="VIQ50_04185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hopanoid biosynthesis-associated RND transporter
                     HpnN"
                     /protein_id="HEY9359609.1"
                     /translation="VQPTATGQAVEIYEWAEAMIVAFMQAGLWALCSIAVLLFLVLRR
                     IGDVLLTLVPLLVAGLATLEICALTGFALNYANIIALPVLLGIGVAFKIYYVMAWRRG
                     ETNFLESALTRAVLFSALMTATAFGSLWLSAHPGTSSMGKLLALSLLCTLASAALFQP
                     ALMGPPRQARLDPVSQ"
     gene            755..1279
                     /locus_tag="VIQ50_04190"
     CDS             755..1279
                     /locus_tag="VIQ50_04190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018900366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HEY9359610.1"
                     /translation="MATAKEATALRVARLDTPTDLRPDAVPEISGALNILLADMFALY
                     LKTKNFHWHMSGPHFRDYHLLLDEQSEQIFATTDDIAERARKIGGTTLRSIGHIGRLQ
                     RVLDNDADFVTPLDMLAELRDDNKQLVTSLRETHAVCDEHNDVASASLIENWIDEAER
                     RTWFLFEATRVARE"
     gene            1432..2391
                     /locus_tag="VIQ50_04195"
     CDS             1432..2391
                     /locus_tag="VIQ50_04195"
                     /inference="COORDINATES: protein motif:HMM:NF014867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEY9359611.1"
                     /translation="MKMGIVGTGNVGSACAMAAVIRGSAREIVLVNRERKTAEAVATD
                     MRYGTPLGPKVDIVDGDYDALEGAGIVLITVGVNEKTGGATDRNDPQGRLRLLDKNAD
                     IYRDVVPRIVRAEPKAALLVVSDPPDPLADVARETCPGTVVLSTGTYLDSQRFRVHLG
                     KHFGVDAAHVEAQVIGDHGTSQVFLWSSARVGGVPVASLLGTRGERIGELRQKLEREV
                     RFANISIIEGHDASQYGIGIVSARIAEMVLNDERAVLPIGSYQKKFGVTLSLPSVVGR
                     AGVIEVLEPEMSEEEREGLRKSADSLQQALERVRTRPRAKVSA"
     gene            complement(2437..3159)
                     /locus_tag="VIQ50_04200"
     CDS             complement(2437..3159)
                     /locus_tag="VIQ50_04200"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEY9359612.1"
                     /translation="MCERGERDDGETLVEGLPRSTLRKLSRKLSFVPAGHRYFGWQKP
                     RALTRVTYFYIDPRGPGMDPGLNFAETEFKPRLYFFESDLWETAQKLNAQAQSSTSYQ
                     RQYAELLGLLLMHELLRLNNGAVAAEPCLRGGLAGWQRKRLAQYMQEHLSEEITLATL
                     GEIAGLSQFHFVRAFKQSFGLPPHRYLSSLRMEKATSLLADPATSVTQIAFNLGFSET
                     SSFTSAFRKHTGLTPTAYRRSL"
BASE COUNT          678 a         1182 c         1220 g          673 t
ORIGIN      
        1 gtgcagccga cagccaccgg acaggcggtc gagatttacg agtgggcaga ggcgatgatc
       61 gtcgccttca tgcaggctgg actgtgggcg ctctgctcga tcgccgtcct gctgtttctc
      121 gttctacgcc gcatcggcga cgtcctgctg accctggtgc cgctcctcgt cgcgggcttg
      181 gcgacgctcg aaatttgcgc gctcaccggc tttgccttga actatgccaa catcatcgcg
      241 ctgccggtgc tgctcgggat cggcgtcgct ttcaagatct actacgtgat ggcctggcgc
      301 cgcggcgaga ccaattttct cgagtcggcc ctgacgcgcg ccgtgctgtt cagcgcgctg
      361 atgaccgcga ccgcgtttgg cagtctgtgg ttgtccgcgc accccggcac ctcgagcatg
      421 gggaagcttc tggcgctgtc actgctttgc acgctcgcgt ccgccgcgct gttccagccg
      481 gcgctgatgg gaccgccgcg ccaggcgaga ttagacccgg tttcccaatg agcgccgagg
      541 ccatgctcgc gagttcggcc gccgaacccg gcaaggcgga tcaagatcgg gcaaggacga
      601 tcaagcctcc cggcacgccg cggcacatat aaaggattgc gcgaggcggg gccagcatcc
      661 caatccatcg gagttcttct ccgcctgcgc agaattccgc ttcttcgtca ccccgcactc
      721 aacgccccga ccgtcgcatc aggaggaggt acaaatggcc acagcaaagg aagccaccgc
      781 gctacgggtc gcccggctcg acacgccgac cgacttgcgt cccgacgcgg tgccggagat
      841 ttccggcgcg ctcaatatcc tgctcgcgga catgtttgcg ctgtacttga agaccaaaaa
      901 tttccattgg catatgtccg gcccgcactt ccgcgactat cacctccttc tcgacgaaca
      961 gagcgagcag atcttcgcca ccaccgacga catcgccgaa cgcgcgcgca agatcggcgg
     1021 gaccacgctg cggtcgatcg gccatatcgg ccggttgcag cgcgtgctcg acaacgacgc
     1081 ggacttcgtc acgccgctcg atatgctcgc ggagctgcgc gatgacaaca agcagctggt
     1141 gacgagcttg cgcgagactc atgcggtttg cgacgagcac aacgacgtgg ccagcgccag
     1201 tctgatcgag aactggatcg acgaggctga gcggcgcacc tggttcctgt tcgaggcgac
     1261 ccgcgtcgcg cgggagtaag ccctcgccgc cctgggcacg cgaaccgggg cgggaacaac
     1321 aaggacttga tggcgagtcg gacatttctt tgctgggtcc agctcgccgc agtgacgtgt
     1381 tcaaaacgaa ccaaccgccg gcgggtcgac gaactggcaa aggagacgtc catgaaaatg
     1441 ggaattgttg gcaccggcaa cgtcggctcc gcctgcgcga tggcggcggt cattcgcggc
     1501 agcgcgcgcg aaatcgtcct cgtcaaccgc gaacgcaaaa cggccgaagc ggtagccacc
     1561 gacatgcgct acggcacgcc gctcggtccc aaggtcgaca ttgtcgacgg cgactatgac
     1621 gcgctcgagg gcgcgggcat agttctgatc acggtcggcg tgaacgaaaa gaccggcggc
     1681 gcgacggatc gcaacgatcc gcagggccgc ctcaggctgc tcgacaagaa cgccgacatc
     1741 tatcgcgatg tcgtgcccag gatcgtgcgg gcggagccca aagcggcgct gctcgtggtg
     1801 agcgatccgc ccgatccgct cgcagatgtc gcgcgcgaga cgtgccccgg cacggtggtg
     1861 ttgagcacag gtacatatct cgacagccaa cgctttcgcg tgcacctcgg caagcatttc
     1921 ggggtggatg ccgcccatgt cgaagcacag gtgatcggcg accacgggac ttcgcaggta
     1981 ttcctgtggt ccagcgcgcg cgtcggcggc gttcctgttg cctcactgct gggcacgcgc
     2041 ggcgagcgga tcggcgagct gcggcagaag ctggagcgcg aggtgcgctt cgccaacatc
     2101 agcatcatcg aggggcatga tgccagccaa tacggaatcg gcatcgtctc ggcccgcatc
     2161 gccgagatgg tgctcaatga cgagcgcgcg gtccttccga tcggcagcta ccagaagaag
     2221 tttggcgtca cgctgtcgtt gccgagcgtc gtcggccgcg ccggcgtcat cgaggtgctc
     2281 gaaccggaaa tgtcggagga agagcgcgag gggctgcgca agagcgcgga tagcctgcag
     2341 caggcgctcg agcgcgtgcg gacgcggccg cgggcgaagg tttcggctta aggcgaaaag
     2401 ccgcccatgc atccgtaacg gcaagccgcc ggcccatcag aggcttcgcc ggtaagccgt
     2461 gggggtgagc ccggtatgct tgcggaacgc actggtaaac gagctggtct cgctgaaacc
     2521 cagattgaag gcgatctgcg tcaccgatgt cgcagggtct gccagaagcg acgtggcctt
     2581 ctccatccgc aggctgctca gataccggtg cggcggcagg ccgaacgatt gcttgaacgc
     2641 gcgcacgaaa tgaaactgac ttagcccggc gatttccccc agggtcgcaa gcgtgatctc
     2701 ctccgagagg tgctcttgca tgtattgcgc cagtcgtttc ctctgccagc ccgccagacc
     2761 gccgcgaagg cagggctcgg cggcgaccgc gccgttgttg agacgcagga gttcgtgcat
     2821 gagcagcagg ccgaggagct ccgcgtactg ccgctgatag gacgtggaac tctgcgcttg
     2881 tgcgttgagt ttctgcgccg tctcccacaa gtcgctttcg aagaagtaca ggcgaggctt
     2941 gaattcggtt tcggcaaaat tgagccccgg atccatcccc ggtccgcgcg gatcgatgta
     3001 gaaataggtg acgcgcgtca gcgctcgcgg cttctgccag ccgaagtagc gatggccggc
     3061 cggtacgaag ctcagcttgc ggctgagctt tcgcaaggtc gacctcggca agccttcgac
     3121 gagcgtctcg ccgtcatccc gctctccgcg ttcacacatg atcagcagat gacgcggtgc
     3181 cctgaatccg tattcgaagg gttcacgcct gaggacttcg acggcgtcgg cttggatcgc
     3241 gttccacctc gtaagctgcc gacgagcaat gtccgagggg gtaaaccgga cgagggatga
     3301 agcaggcccg gcgtcggcgg ccgacgtggc gcctccgggg acgatagcca attcgctcat
     3361 gacagggcct cctgatcttg cgatccggtt ccctccgtga gcgacgttcc tctcatctca
     3421 taggtgacga tccccgcgtt caaatgcacg tcgcattgtc ggcagatgaa catcgcctgt
     3481 gttcaaatct gcgtgcgggg agggaacccg tccgcctggg cttggccgca agagatttgc
     3541 cgagcaggcc gcggttactc gggtcgcgcg gctggttttg gcaagcgcaa gccgttggtc
     3601 gcaagctatg gaaaagctac gccgcggcca ggcggcgggt attgctgata ttgtccttca
     3661 tcttgcgcag gccgcgctgc agggagcgca tgccggcacc atcgatgccg ttggtcatga
     3721 tgccgtagag cttcttgcgg cagcgcttga tgt
//
LOCUS       DATCWM010000214         3146 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_444523, whole genome shotgun sequence.
ACCESSION   DATCWM010000214 DATCWM010000000
VERSION     DATCWM010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3146
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_444523"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            31..279
                     /gene="rpsQ"
                     /locus_tag="VIQ50_04205"
     CDS             31..279
                     /gene="rpsQ"
                     /locus_tag="VIQ50_04205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HEY9359613.1"
                     /translation="MPKRTLHGVVVSDKQDKTVVVRVERRFTHPVMKKTVRRTKKYYA
                     HDESNEYHVDDIVWIEERRPLSKLKRWEVVRGEKKKVV"
     gene            320..688
                     /gene="rplN"
                     /locus_tag="VIQ50_04210"
     CDS             320..688
                     /gene="rplN"
                     /locus_tag="VIQ50_04210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011567679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HEY9359614.1"
                     /translation="MIQMQTNLDVADNSGARRVMCIKVLGGSKRKYATIGDVIVVSVK
                     EAIPRGRVKKGDVMKAVVVRISKDIKRPDGSIIRFDRNAAVLINPQMEPVGTRIFGPV
                     PRELRAKNHMKIISLAPEVL"
     gene            688..1014
                     /gene="rplX"
                     /locus_tag="VIQ50_04215"
     CDS             688..1014
                     /gene="rplX"
                     /locus_tag="VIQ50_04215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HEY9359615.1"
                     /translation="MAAKIRKGDKVIVLAGRDKGRTGEVIEVRPDESRAFVRGINLVK
                     RHQKQSAQQEGGIISKEAPVHLSNLALADPKDGKPTRIGFKFVGAGENRRKVRVAKRS
                     GVEIDG"
     gene            1199..1729
                     /gene="rplE"
                     /locus_tag="VIQ50_04220"
     CDS             1199..1729
                     /gene="rplE"
                     /locus_tag="VIQ50_04220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018266628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HEY9359616.1"
                     /translation="MKTHFEEVVRKKLADEFGYKNRMQVPVIEKVVINMGIGEGVNDR
                     KKVEAAANDLSLITGQKAVITKARKSIATFKVRDGQAIGCKVTLRKTRMYEFVDRLIN
                     IALPRVRDFRGLSPKSFDGGGNYTIGIKEHIVFPEIDYDKAADVWGMDITVCTSAKSD
                     AEARALLSAFNFPFRQ"
     gene            1764..2069
                     /gene="rpsN"
                     /locus_tag="VIQ50_04225"
     CDS             1764..2069
                     /gene="rpsN"
                     /locus_tag="VIQ50_04225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HEY9359617.1"
                     /translation="MAKKSSIEKNNRRRRLSKKYSGRRARLKAIARDKNKPMEERFAA
                     ALKLAELPRNSSATRVRNRCEVSGRPRGFYRKHRLSRIALRDLGSKGLIPGLVKSSW"
     gene            2082..2480
                     /gene="rpsH"
                     /locus_tag="VIQ50_04230"
     CDS             2082..2480
                     /gene="rpsH"
                     /locus_tag="VIQ50_04230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HEY9359618.1"
                     /translation="MAMNDPLGDMIARIYNAQMRNKSKVSIPASRLRVSVLDVLKTEG
                     FIRGYAAVDHANGRKELEIELKYFDGAPVIREISRVSKPGRRVYASVKTLPRINNGLG
                     VAILSTPKGVMADHDAREHNVGGEILCTVF"
     gene            2536..3069
                     /gene="rplF"
                     /locus_tag="VIQ50_04235"
     CDS             2536..3069
                     /gene="rplF"
                     /locus_tag="VIQ50_04235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004685699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HEY9359619.1"
                     /translation="MSRVGKKPVAIPSGVTASVEGQTIKVKGPKGALSVALHGDVAAK
                     VEGNEVKVDPRADTKRARAMWGTYRSLLANAMTGVTKGFERRLEITGVGYRAAVQGKN
                     LQVQLGYSHDIVYPIPEGITIAVPKPTEVVVTGIDGQKVGHVAAEIRAFRKPEPYKGK
                     GVKYAGEYIFRKEGKKK"
BASE COUNT          714 a          909 c         1053 g          470 t
ORIGIN      
        1 cgctcgaagg ccaaggcgga gtaatcagag atgccgaaac gcacgcttca tggcgtcgtg
       61 gtgagcgaca agcaggacaa gaccgtggtg gtgcgcgtcg agcgccgctt tacccatccg
      121 gtcatgaaga aaacggtgcg gcgcacgaag aaatactacg cccacgatga gagcaacgaa
      181 tatcacgtgg acgacatcgt ctggatcgaa gagcgccggc cactgtccaa gctcaagcgc
      241 tgggaggtgg tccggggcga gaagaagaaa gtcgtgtgag cgcggtgggc gcgacagttg
      301 acgaggcgag cgcggtgtca tgatccagat gcagaccaac ctagacgtgg cggacaattc
      361 cggtgcccgc cgtgtcatgt gcatcaaagt gctgggtggc tcgaagcgca aatatgccac
      421 catcggcgac gtgatcgtcg tatcggtgaa agaggcgata ccgcgcggac gggtgaagaa
      481 gggcgatgtg atgaaggccg tcgtggtgcg catctcgaag gacatcaagc gtcccgacgg
      541 ttcgatcatc cgcttcgacc gcaacgccgc ggtgctgatc aacccgcaga tggagccggt
      601 aggtacacgc atcttcggac cggtcccccg cgagctgcgc gccaagaacc acatgaagat
      661 catctcgctc gcgccggagg tgctgtgatg gcggcaaaaa tccgcaaggg cgacaaagtg
      721 atcgtgctcg ccggccgcga caagggccgc accggcgaag tgatcgaggt gcgccccgat
      781 gagagccgcg cctttgtccg cggaatcaat ttggtcaagc ggcatcagaa gcagagcgcg
      841 cagcaggagg gcggcatcat ttccaaggaa gccccggtgc atctgtccaa tcttgcgctc
      901 gccgatccca aggacggcaa accgacccgc atcggcttca agttcgtggg cgcgggcgag
      961 aatcgacgca aggtacgggt ggccaagcgg tcgggagttg agatcgatgg ctgagacgga
     1021 aaccaaaggc aacgtcgaca aagccgccgc cgccgataaa ccggcgcggc cgcaaaaggg
     1081 cgacaagccg cagcaggcgc aaaagggtgc aaagccgcag ccgggggagg cggccgggaa
     1141 gggcgatggc gcgccgcgcc ccaagccgag aaagccggag gagcgcgtca cgccgcggct
     1201 gaaaactcat tttgaggagg tcgtgcgcaa gaagctggcc gatgagttcg gctacaagaa
     1261 ccgcatgcag gtgccggtga tcgagaaagt ggtcatcaac atgggcatcg gcgaaggcgt
     1321 caacgaccgc aagaaggtcg aagccgccgc caatgatctc agcctgatca ccggccagaa
     1381 ggcggtgatc accaaagcca gaaagtcgat cgccaccttc aaggtgcgcg acggccaggc
     1441 gatcggctgc aaggtgacgc tgcgcaagac ccgcatgtac gagttcgtcg acagactgat
     1501 caacattgcg ctgccgcggg tgcgcgattt ccgcgggctg tcgccgaaaa gcttcgatgg
     1561 cggcggaaat tacacgatcg gcatcaagga acacatcgtc ttccccgaga tcgactacga
     1621 caaggcggcc gatgtctggg gaatggacat caccgtgtgc accagcgcga agtccgatgc
     1681 agaggcgcgc gcgctgttga gcgcgttcaa cttcccgttc cggcagtgag gacatcctcc
     1741 acggcggaaa gcaggagata ttgatggcga agaaaagttc gatcgagaag aacaacaggc
     1801 ggcgcaggct gagcaaaaaa tattccggcc gacgcgctcg gctcaaggct attgctcgcg
     1861 acaagaataa gccaatggag gagcgcttcg cggcggccct caagcttgcc gaactgccgc
     1921 gcaactcctc agcgacccgc gttcgcaatc gctgcgaggt atcgggccgg ccacgcggct
     1981 tctaccgcaa gcaccggctg tcgcgcatcg cgcttcggga tctcggctcc aaggggctga
     2041 tcccgggcct ggtcaagtcg agctggtaag ggagcgggcc gatggcgatg aacgatccgc
     2101 tcggcgatat gatcgcgcgt atctacaatg cacagatgcg caacaagtcg aaagtgtcga
     2161 taccggcctc gcggttgcgg gtaagcgtgc tcgacgtgct caaaacggaa ggcttcattc
     2221 gcggctatgc ggcggttgat cacgccaacg ggcgcaagga gcttgagatc gagctgaaat
     2281 atttcgatgg cgcgccggtg attcgggaaa tttcgcgcgt ctccaagccc gggcggcggg
     2341 tctatgcctc ggtcaaaacc ctgccgcgca tcaacaacgg attgggcgtc gcgatcctgt
     2401 caacgccgaa gggcgtcatg gccgatcacg acgcccgcga gcacaacgtg ggcggagaga
     2461 tcctctgcac cgtgttttga tcggaagctt tgcaggacaa cggcgccaac gctaagcgca
     2521 aacggaacgt cagccatgtc tcgtgtcgga aagaagcccg tcgcaatacc ctccggcgtt
     2581 actgccagcg tggagggcca aaccatcaag gtgaagggcc cgaagggcgc gctttcggtc
     2641 gcgctgcacg gggatgtcgc ggcgaaggtc gagggcaacg aggtcaaggt ggatccgcgc
     2701 gccgacacca aacgcgcccg cgcgatgtgg ggaacgtacc gttcgctgct cgctaatgcg
     2761 atgaccggcg tcaccaaggg cttcgagcgg cggctcgaga tcaccggcgt cggctatcgc
     2821 gccgccgtgc agggcaagaa cctgcaggtc cagctcggct atagccatga tatcgtttac
     2881 ccgatcccgg aaggcatcac gatcgcagtc ccgaagccga ccgaggtcgt cgtcaccggc
     2941 atcgatgggc agaaggtcgg ccacgtcgcg gcggaaatcc gcgcatttcg taagcccgag
     3001 ccgtacaagg gcaagggcgt caagtacgcg ggcgaataca tcttccgcaa agaaggcaag
     3061 aagaagtgat gagggcgcac gatggcgaca gtcactgatc ggaccgtgcg gcggacggcg
     3121 aaggtgcggc ggaacatccg ccgcgc
//
LOCUS       DATCWM010000215         2435 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_28893, whole genome shotgun sequence.
ACCESSION   DATCWM010000215 DATCWM010000000
VERSION     DATCWM010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2435)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2435)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2435
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28893"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..513)
                     /locus_tag="VIQ50_04240"
     CDS             complement(<1..513)
                     /locus_tag="VIQ50_04240"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9359620.1"
                     /translation="MKIDVLSIGAFPEATNAELANRFAITHHFHRPTPDALGAELKRR
                     IRAIATEANRGADRALIAALPKLEVIAIFGVGTDSVDLAAARERNVMVTNTPGILTDE
                     VADLAIGLMLASARQILFADRYVREGTWASKGPIPLGRSVGGKTMGVLGLGGIGRAIA
                     DRGAALRMRVV"
     gene            complement(521..1708)
                     /locus_tag="VIQ50_04245"
     CDS             complement(521..1708)
                     /locus_tag="VIQ50_04245"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HEY9359621.1"
                     /translation="MDERLLNPISTRELERRWVAVRKAMAERKIDALVMQNNNDWLGG
                     YVRWFTDTPLSNGYPRSVVFPASDLMTVVDMGARGGHRKINGGDETNRGVGEMIFTPA
                     FTSVAYTDEYQAELVADELKRRGYRTIGWVASGVMPHKFVARIERELAGKAKFVDATE
                     FVDRLKAIKSEEERDLIRKAAQMQDEVFTRVLKKIEPGMTDNDVTALAQYEGRLLGSE
                     QGLFLGSSAPLGQASRFIDRHLQARSLKQGEHFTLLIENNGPGGFYTEIARTIVLGKA
                     SNELIDGFESMKEAQAHTLRLLKPGASCAEIAESHDEYMRGRALPPELRLYCHGQGYD
                     LVERPLVRCDETMTIEEHMNLAVHPGYETPSIFAVICDNYLIESDGPGACLHKTAKQV
                     FEV"
     gene            complement(1803..>2435)
                     /locus_tag="VIQ50_04250"
     CDS             complement(1803..>2435)
                     /locus_tag="VIQ50_04250"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9359622.1"
                     /translation="HDAALSAAELERCVRDLDLRGAIISSHVNGVELGDERLRPFWAK
                     AEELGAVIYIHPGGNRDRRFKRFHLWNSVGQAFEEAMAISSLMYDGVLETFPRLKICV
                     SHGGGYMPYYMGRIDRNYAEKANTRVNMSKPPIEYLRMLYFDSCVYERAVLQHLVDKV
                     GAERVLLGSDYPVGEGKPVEFVTGTDTLSPAQQERIVGTNAAALLELANS"
BASE COUNT          401 a          789 c          789 g          456 t
ORIGIN      
        1 gaccacgcgc atgcgcagcg cggcgccacg atcggcgatg gcgcggccga tgccgccgag
       61 cccgagcacc cccatggtct tgccgccgac gctgcgcccg agcgggatcg ggcccttgct
      121 cgcccaggtg ccctcgcgca catagcgatc ggcgaacagg atttggcgcg cggacgcaag
      181 catcaggccg atggcgaggt cggccacttc gtccgtcaaa atacctgggg tattggtcac
      241 catgacattg cgctcgcgcg cggcggcgag atcgacagaa tcggttccga ccccaaagat
      301 ggcgatcact tcgagctttg gcagcgctgc gatcagcgcg cggtcggcgc cgcgattggc
      361 ctcggtcgcg atcgcgcgga tgcggcgctt gagttcggcg cccagcgcat ccggcgtcgg
      421 ccggtggaag tgatgggtga tggcgaagcg gttcgcgagt tcggcgttcg tcgcctcggg
      481 aaacgcgccg atgctcagta cgtcgatctt catggacgcg tcaaacctcg aagacctgct
      541 tcgcggtctt gtgcaggcac gcgcccgggc catcggactc gatgagataa ttgtcgcaga
      601 tcacggcgaa aatcgagggc gtctcgtagc cgggatggac cgcgaggttc atgtgctcct
      661 cgatcgtcat ggtctcatcg cagcgcacca acggccgttc cacgaggtcg tagccctggc
      721 cgtggcaata gagccgcagc tccggcggca gagcgcggcc gcgcatgtac tcgtcgtggc
      781 tctcggcgat ctcagcgcag gacgcgcccg gcttgagcag gcgcaaggtg tgggcctgcg
      841 cctccttcat cgattcgaag ccgtcgatca gttcgttcga tgccttgccc agcacgatgg
      901 tgcgcgcaat ctcggtgtag aagccgccgg gcccattgtt ctcgatcaag agcgtgaagt
      961 gctccccttg cttgaggcta cgcgcctgca gatggcggtc gatgaaacgc gacgcctgtc
     1021 cgagcggggc cgaggagccc aggaagagtc cctgctcgct gccgaggagc cgcccttcgt
     1081 attgcgcgag cgcggtcacg tcgttgtcgg tcatgccggg ctcaatcttc ttgagcaccc
     1141 gcgtgaaaac ctcgtcctgc atctgcgcgg ccttgcgaat gaggtccctc tcctcctcgc
     1201 ttttgatcgc cttgaggcga tcgacgaatt cggtcgcatc cacgaacttg gccttgccgg
     1261 ccagctcgcg ttcgatgcgc gcgacgaatt tgtgcggcat cacgccgctg gcgacccatc
     1321 cgatggtgcg atagccgcgc cgcttgagtt cgtccgcgac gagctcggcc tggtattcgt
     1381 cggtgtaagc gacgctggta aaggccggcg tgaagatcat ctccccaacc ccgcggttgg
     1441 tctcatcgcc gccgttgatc ttgcgatgcc cgccgcgcgc gcccatgtcg accacggtca
     1501 tcaggtccga ggcggggaag acgacgctgc ggggatagcc gttgctcagc ggcgtgtcgg
     1561 tgaaccagcg gacatagccg ccgagccagt cgttgttgtt ctgcatcacc agcgcatcga
     1621 tcttgcgctc cgccatggct ttgcggaccg cgacccaccg ccgttcgagc tcgcgggtgg
     1681 aaatcggatt gagcaggcgt tcgtccatca tcttgcgtcc atgctgaagc ggagccctta
     1741 gcccggatgg tgcggagcaa aaccggaaac tgcgctgcat tgtgagactg ccggcattgc
     1801 ggctacgagt ttgccagctc gagcagcgcc gccgcgttcg ttcccacgat tcgctcttgc
     1861 tgcgccggcg acaacgtgtc ggtgccggtg acgaattcga ccggctttcc ttcgcccacg
     1921 ggatagtccg aaccgagcag cacccgctcc gcgcctacct tgtccaccag gtgctggagc
     1981 accgcgcgct cgtagacgca ggagtcgaag taaagcatgc gcagatactc gatcggcggc
     2041 ttgctcatgt tgacgcgggt gttggccttt tcggcatagt tgcggtcgat gcggcccata
     2101 taatacggca tgtagccgcc gccgtgcgag acgcagatct tcagccgcgg gaacgtttcc
     2161 agcacgccgt catacatcag cgacgagatc gccatcgcct cctcgaacgc ctggccgacg
     2221 ctgttccaga ggtgaaagcg cttgaagcgg cgatcgcggt tgccgccggg atggatatag
     2281 atcaccgcgc cgagctcttc cgccttggcc cagaacggcc gtagccgctc gtcgcccaac
     2341 tcgaccccgt ttacatggga tgaaatgatg gcgccgcgca gatcgagatc ccgcacgcag
     2401 cgttcgagtt cggccgccga gagcgccgcg tcgtg
//
LOCUS       DATCWM010000216         3271 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_503938, whole genome shotgun sequence.
ACCESSION   DATCWM010000216 DATCWM010000000
VERSION     DATCWM010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3271
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_503938"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..445
                     /locus_tag="VIQ50_04255"
     CDS             <1..445
                     /locus_tag="VIQ50_04255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="invasion associated locus B family protein"
                     /protein_id="HEY9359623.1"
                     /translation="QPTLLGQYADWGAYTASPGGNKVCFALAKPKTTTLEPAGRTRGP
                     SYLFVSTRPTDKVKNEVSVIIGYPFKSTSDATAEIGPAKFAMYTQNDGAWIKNVAEEA
                     RMVDAMRKGADLTVRGTSGRGTQSTDQYSLKGLAQALDKIEQECK"
     gene            complement(599..736)
                     /locus_tag="VIQ50_04260"
     CDS             complement(599..736)
                     /locus_tag="VIQ50_04260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359624.1"
                     /translation="MLVLFRLVLFSRLDLKFRRHSPQPARDREIEGGSGHRNQSFSLP
                     T"
     gene            930..1721
                     /locus_tag="VIQ50_04265"
     CDS             930..1721
                     /locus_tag="VIQ50_04265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018183672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HEY9359625.1"
                     /translation="MIRVGIGGWVFEPWRGEFYPKGLPHARELEYASRKLTSIEINST
                     FYRTQKPDSFRKWADETPDDFVFSLKGPQFATNRRVLAEAGPSIERFFASGLLELKSK
                     LGPVLWQMAPTKKFDPADFAGFLALLPRTVDGRPMRHAVEVRHESFLVPAFIELLRKF
                     SVGVVAVESDKHPLIADVTSDFIYARLQRTSEREKTGYPRRVLERWAKRARDWATGAA
                     ADDLATIAAPLPKQGRRDVFIYMISGAKVRAPAAAMAMIEQLKGG"
     gene            1803..3077
                     /gene="rlmN"
                     /locus_tag="VIQ50_04270"
     CDS             1803..3077
                     /gene="rlmN"
                     /locus_tag="VIQ50_04270"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HEY9359626.1"
                     /translation="MTEPLRSTSVSSTTAPSPPPGFVEKTPLERYLPPAKPSLVGLSR
                     AQLTEALATVGVAAAQRKMRVQQIWHWLYVRGVRDFAEMTSVSKELRAALAAQFTLAR
                     PEVVAEQISADGTRKWLLRLADGHSGERPHEIECVYIPEADRGTLCLSSQVGCTLTCP
                     FCHTGTQRLVRNLTPGEIVGQIMVARDRLDDWLGAGRPAGEPAGAQRMRQGGQRLVSN
                     IVMMGMGEPLYNFDAVRDALLIAADGEGIAISKRRITLSTSGVVPNIARAGAEIGCML
                     AVSLHAVRDELRNELVPLNHKYPINQLLDACRKYPSLSNARRITFEYVMLKDVNDSLT
                     EAKALVKLLAGIPAKINLIPFNPWPDTKYECSDWEQIERFSEIIFNAGYASPVRTPRG
                     RDILAACGQLKSASEKLSARERLALRAMAMTD"
BASE COUNT          596 a         1064 c         1018 g          593 t
ORIGIN      
        1 gcaacccacc ctgctcggcc aatacgccga ctggggcgcg tataccgcct cgcccggcgg
       61 caacaaggtc tgctttgcgc tcgcgaagcc gaagaccacg acattggaac ccgctggccg
      121 cacgcgcggt ccctcatacc tgttcgtttc tacccgtccc accgacaagg taaaaaacga
      181 ggtatcggtc atcatcggat atccgttcaa atcgacctct gacgccaccg ccgagatcgg
      241 ccccgccaag ttcgcgatgt acacccaaaa cgacggcgcc tggatcaaga acgtggccga
      301 ggaggcgcgc atggtcgacg ccatgcgcaa gggcgccgac ctgacggtga gaggcacctc
      361 gggccgcggc acgcaatcga ccgatcagta ttcattgaag ggcctcgcgc aggcgctcga
      421 caagatcgag caggagtgca agtagcgctg acgccgccga gccgggaact ccgcggaacc
      481 aaaaatattc ggaactgata acgctcgtcc cgggttatcg ggtcaaagcc ctcgttcctg
      541 ggttatcggg tcaaagccct cgctcaaggg gttggcgtca atggtcagcg gtgcatattt
      601 acgtcggcag gctgaagctc tgattgcgat gtcccgagcc accttcgatc tcacgatcgc
      661 gggccggttg cggcgaatgg cggcggaact tcagatcaag gcggctgaac aggaccagcc
      721 tgaacaggac gagcatgctt tcaccgaacc tacggtgacg aagttcaagc ggtccgcccg
      781 gttctaagcg ggcaccgctg ggatggttga gcgtcagcga accatcctct tcccgcagac
      841 ccgaagtccc caatctatct gcaccacggt tgtccgccgg ttgcgtcctc tcgcgatcca
      901 tgtcggaatg agatcggcga ggtgcgcgca tgatccgggt cggcatcggc ggctgggtat
      961 tcgagccctg gcgcggcgag ttctatccga agggactgcc gcacgcgcgc gagctcgaat
     1021 atgcgagccg caagctcacc agcatcgaga tcaacagcac cttctatcgc acgcaaaagc
     1081 cggacagctt ccgcaaatgg gccgacgaga cgcccgacga tttcgtgttc tcgctcaaag
     1141 gtccgcaatt cgccaccaac cgccgcgtgc tggccgaggc tgggccctcg atcgagcgat
     1201 tcttcgcaag cggcctgctt gagctgaagt cgaagctcgg tccggtgctc tggcagatgg
     1261 cgccgaccaa gaagttcgat ccggccgact tcgccggttt tctcgcgctt ttgccaagaa
     1321 cggtcgatgg ccggccgatg cgccacgcgg tcgaggttcg ccacgagagc ttcctcgtac
     1381 cggccttcat cgaattgttg cgcaagttct cggtgggggt ggtcgcggtc gagtccgaca
     1441 agcatccgct gatcgccgac gtcaccagcg atttcatcta tgcccgcctg cagcgcacct
     1501 cggagaggga gaagaccggc tatccgcggc gcgtcctcga gcggtgggcc aagcgcgcac
     1561 gcgattgggc cacgggcgcc gccgcggacg atctcgccac catagcagcg cccctgccga
     1621 agcaaggtcg gcgcgatgtc ttcatctaca tgatttcggg cgccaaggtc cgcgcgcccg
     1681 ccgcggcaat ggcaatgatc gagcagttga agggcggatg atctcgggtg acatcatcta
     1741 tcgcggtcgg catccgcacc ccatctatgg tagaagcgcc acgcaatgct ccgttcaagg
     1801 cgatgaccga accgctgcga tccacgtcag tttcctcgac gacggctccc tccccgcccc
     1861 cgggtttcgt ggaaaagacg ccgctcgagc gatatttgcc gccggcgaag ccctcgctgg
     1921 tgggtctgtc gcgtgcgcaa ctgaccgaag cgctcgcaac ggtcggcgtg gcagccgcgc
     1981 aacgcaagat gcgcgtgcag cagatctggc actggctcta cgttcgtggc gtccgtgact
     2041 tcgccgagat gaccagcgtc tcgaaagagc tgcgtgctgc cctcgcagcg cagttcacgc
     2101 tcgctcgtcc ggaggtggtg gccgagcaga tctcggccga cggcacgcgc aaatggcttc
     2161 tgcgcctggc cgacgggcat tccggcgagc ggccgcacga gatcgaatgt gtttacattc
     2221 cggaggctga tcgcggcacg ctttgcctct caagtcaggt aggctgcacg ctcacctgcc
     2281 cgttctgcca taccggcacg cagcgcctgg tgcgcaatct tacgcctggc gaaatcgtgg
     2341 ggcagatcat ggtcgcgcgc gatcgcctcg atgattggct gggagcgggg cgtccggctg
     2401 gcgagcccgc tggcgcgcaa cggatgcgtc agggcggcca gcgtctcgtc tcgaacatcg
     2461 tcatgatggg catgggcgag ccgctctaca atttcgatgc ggtgcgcgac gcgctgttga
     2521 tcgcggcgga cggcgaggga atcgccatct ccaaacgccg gatcacgctc tcgacttcgg
     2581 gcgtcgtgcc gaacatcgct cgcgccggcg ccgagatcgg ctgcatgctt gcggtgtcgc
     2641 tccacgccgt gcgcgacgag ctgcgcaatg agctcgttcc gctcaaccac aaatatccga
     2701 tcaatcagtt gctcgatgcc tgccgcaagt atcccagtct gtccaacgcg cgccgcatta
     2761 ccttcgaata cgtgatgctc aaggacgtca acgactcgct caccgaggcc aaggcgctgg
     2821 tcaagctgct cgcgggaatt ccggcgaaga tcaacctcat tccgttcaat ccatggcccg
     2881 acaccaaata cgaatgctcc gactgggagc aaatcgaaag attctccgag atcattttca
     2941 acgccggtta tgcctcgccg gtgcgcacgc cgcgcgggcg cgatatcctc gccgcttgcg
     3001 ggcagctcaa gagcgcgagc gagaaactct ccgcgcgcga gcgcctggcc ttgcgcgcca
     3061 tggcgatgac cgactgagat gggcagcctc ggccggctgc tcttgcgctt cctcctggtg
     3121 ccgctcggat acgtcctggc agtggttgtg gcgacgttcg tcatcgtgtt cggacctgga
     3181 gggtcggcga ggcgaccgcc catcccgaca cgcaggcctt cgccatgttc ggtttggtct
     3241 tcgcagcgcc ggtgctgctg gtgatgctgc t
//
LOCUS       DATCWM010000217         2637 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_525616, whole genome shotgun sequence.
ACCESSION   DATCWM010000217 DATCWM010000000
VERSION     DATCWM010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2637
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_525616"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            383..1036
                     /locus_tag="VIQ50_04275"
     CDS             383..1036
                     /locus_tag="VIQ50_04275"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359627.1"
                     /translation="MPIVFSTSADPVSLGLVASLNRPGGNVTGVNILGVELTAKRLGL
                     LRELAPQATRFVALVSPNSVMTDATIKNVHASVPTLGLPVEILYAGSSDRDIEAAFAN
                     LSQKPGAALLVTVDTFFFTRRALIVTLAARHALPTVYYSREYADIGGLISYGPNNDNI
                     YELTGIYTGRVLKGEKPADLPVAQPTKFEMVINLSTAKALSIDVPPTLLALADEVIE"
     gene            complement(1194..2183)
                     /locus_tag="VIQ50_04280"
     CDS             complement(1194..2183)
                     /locus_tag="VIQ50_04280"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9359628.1"
                     /translation="MRNRLRLALLTLGTLAFAAAAAQASAQGWPIRPVTVVVPFAAGS
                     STDTAARILAVGMSEALGQQLVVENVGGAAGMTGTLRVARSAPDGYQMLFGTVDTLAI
                     APALQKQPPYDTLKDFAPAGMVVEQPIVLIVREDLPVKTLAEFAAYAKANQSKMQFGS
                     AGIGSGSHFACAKLNAALSIDTVHVPYRSSGLAAQDLIGGRLDYLCALGATARQPIES
                     GKAKAIALLTADRSALFPQLTTSKEQGVAGVDSYFWSAFLFPKDTPAAIVQKIADASN
                     KTLNMPETVERLRNAGIEPVAADRRSPAHQRDLTVQEMKNWADQVKASGLPLQ"
BASE COUNT          498 a          824 c          818 g          497 t
ORIGIN      
        1 atctcagcgt ccagcgcggc gatgcgctga ccatccgcac acgtcgcgat gacgatgcga
       61 aatccgcttc gccgttccta tgccgaggtg gcccggtccg cccccccaga acggagagtg
      121 attgggacgt gtctatccgt gggcgccgac cgggccgtac ctcaacgtgc aagacgataa
      181 cgccggaaag ttggcggggt ggctggcccg gggcgccgaa ggtcaaaggg cggtgggaaa
      241 gaagcgaaga aaacgactga ccctccggga catctcgcga tgacgacgcg aagtccgatt
      301 tcgccagccc gcggacatgc cgccggattg gctctgggca gcaatatacc attaggcggc
      361 gacatcggcc ccggtctcaa gcattccgat cgtgttcagc acctccgccg atccggtgtc
      421 attgggtctc gtcgccagcc tcaatcgccc gggcggcaac gtcacgggag tcaacatcct
      481 cggtgtggag ctcaccgcga agcggctcgg gctgttgcgt gagttagcgc cgcaagcgac
      541 ccgtttcgtc gcgctcgtta gtcccaactc tgtgatgact gacgccacta tcaagaacgt
      601 gcatgcgagt gttccaaccc tagggttgcc cgttgaaatc ctttatgctg gcagcagcga
      661 tcgcgacatc gaggcggctt tcgcaaatct ctcgcaaaag cccggcgcgg cattgctggt
      721 cactgtcgac acgttctttt tcactcgtcg cgcattgatc gtcacgctgg cagcgcgcca
      781 tgctctgccc accgtctatt acagccgcga atatgccgat atcggcgggc tgatcagtta
      841 cgggccgaac aacgacaaca tatacgagct cactggcatc tatacgggcc gcgtcctcaa
      901 aggcgagaaa ccagccgacc tgccggtcgc gcagccgaca aaattcgaaa tggtcatcaa
      961 tctctcgacc gccaaggcgc tctcgatcga cgtaccgcct acgctgctcg cgctcgccga
     1021 cgaggtgatc gaataaagac ggatgtttgc tgcgcttgct cgcccgcccc gacgaggtga
     1081 tcgaataacg gttgccttgc tgcgattgcg cacagccggt tatggcacga agcgacgcaa
     1141 atcgatgtcc gcttccacgt cggctttctg gcgagaagcg gaattcgagg tgtttactgc
     1201 agcggcagcc cgctcgcctt cacctgatcg gcccagttct tcatttcctg cacggttaag
     1261 tcgcgctgat gggccggcga gcggcggtcc gcggcgaccg gctcgatgcc ggcattgcgc
     1321 agccgttcga ccgtctcggg catgttgagc gtcttgttgc tggcatcagc gatcttctgg
     1381 acgatggccg cgggcgtgtc cttcgggaat aggaaggccg accagaaata ggagtcgacg
     1441 cctgccacgc cctgctcctt ggaggtggtc agttgcggga atagcgccga gcggtctgcc
     1501 gtcagcagcg cgatggcctt ggccttgccg ctctcgatcg gctggcgcgc ggtggcgccg
     1561 agcgcgcaga gatagtcgag acgcccaccg atcaggtctt gcgcggcgag gcccgagctg
     1621 cgatagggca cgtgaaccgt gtcgatgctg agcgcggcat tgagcttggc gcaggcgaaa
     1681 tgcgagccgg agccgatgcc ggcggagccg aactgcatct tcgactggtt ggccttcgca
     1741 taggccgcga actcggccag cgtctttacc ggcaggtcct cacggacgat cagcacgatc
     1801 ggctgctcga ccaccatgcc agccggggcg aagtccttga gggtgtcgta gggcggctgc
     1861 ttttgcagcg ccggcgcgat cgcgagcgta tcgaccgttc cgaacagcat ctggtagccg
     1921 tccggcgcgc tgcgcgcgac ccgcagcgtt ccagtcatgc cggcggcgcc gccgacgttt
     1981 tcgacgacga gctgctgacc aagcgcttcc gacatgccga ctgcaaggat gcgcgccgcc
     2041 gtatcggtcg agctgcccgc tgcaaaagga acgaccacgg tgacgggccg gatcggccag
     2101 ccttgcgccg acgcctgagc ggccgcagcg gcgaatgcaa gtgtgccgag tgtcaacagc
     2161 gcaagtcgaa gccgatttcg catgttcttc tccttaaaca gcgagtcgag gttaacaccg
     2221 aacggggccg agaatttgga gcagatattc ccagcgaaat ggcgaaccac cgccatgttg
     2281 ctttcgccta gccgacgaga tcgagtgtct actggccgaa gagaaccgca ccttccatca
     2341 tgccggcggg cgaaggaaca tggcagcccc cggtgtgaag cgagcctcgt agaaccgcaa
     2401 ccttacgatg gcgcattctg ttttgttgca tctgctcacg accggttttg gcacgaagca
     2461 gacaagtcgt ggcgaactcg tgatgtcgga tcgaatattc cttcccaacc atgccatgcg
     2521 acgttcggcc cgattgccta tcgcgtaatg gcactaccaa acttacgccg aatcaatcgc
     2581 tgaaccgatc aaagcaccgt gctgcgtggc ctgattgcct tctgcctgtt gcggcgg
//
LOCUS       DATCWM010000218         3979 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_55743, whole genome shotgun sequence.
ACCESSION   DATCWM010000218 DATCWM010000000
VERSION     DATCWM010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3979)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3979
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55743"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..414
                     /locus_tag="VIQ50_04285"
     CDS             <1..414
                     /locus_tag="VIQ50_04285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359629.1"
                     /translation="AGTGFALVTDHIPEFSKRGLCARDPKHALADDIAMRMPRKGGNG
                     DAFKPYSPAAALPYAHQWRLFRTPNDAFLAANTHREGTPLFDILQPAYAALYSGAIHP
                     TAEAHAIVADHVMRHVRVLVEQPDVNQAPTQDGAH"
     gene            complement(465..2621)
                     /gene="scpA"
                     /locus_tag="VIQ50_04290"
     CDS             complement(465..2621)
                     /gene="scpA"
                     /locus_tag="VIQ50_04290"
                     /EC_number="5.4.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004494 - methylmalonyl-CoA mutase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase"
                     /protein_id="HEY9359630.1"
                     /translation="MSRIPNFASVDFAGAAPKPAPADGAWLTPEGIPVKPVYGAEDVR
                     SLDFLQTFPGIPPYLRGPYPTMYVTQPWTIRQYAGFSTAEDSNAFYRRNLAAGQKGLS
                     VAFDLATHRGYDSDHPRVAGDVGMAGVAIDSIYDMRTLFAGIPLDQMSVSMTMNGAVL
                     PVLALYIVAAEEQGVKPHQLSGTIQNDILKEFMVRNTYIYPPEPSLRIISDIFAFTAT
                     HMPKFNSISVSGYHMQEAGATQDLELAYTLADGVEYVRAGLRAGLDVDRFAPRISFFW
                     AIGMNFFMEVAKLRAARLLWAKLMKRFEPRDARSLSLRTHCQTSGWSLAAQDVFNNVA
                     RTAIEAMAATQGHTQSLHTNALDEALALPSDFSARIARNTQIVLQQESGTTRVIDPWG
                     GSFYVERLTHELAKASWRHIQEIEEMGGMAKAIEAGLPKLRIEEAAAKTQARIDAGEQ
                     AVIGVNKYRPEREAPVHLLKVDNAAVRRSQIEKLSRLKRERDAKAVEDALAALTRSAA
                     GGNGNLLALAIDAARAKATVGEISSALEQVFGRHRAEIKAITGVYKREVGAMSEAVAR
                     VHKLVSEFEINEGRRPRILVAKIGQDGHDRGQKVIATAFADLGFDVDIGPLFATPTEA
                     ARQAVENDVHVLGVSSLAAAHLTLVPQLKAALVKEGRDDIMIVVGGVVPPQDYEDLKR
                     AGAEAIFPPGTVIAEAAETLLHKLNRRLGHGQQAAE"
     gene            complement(2806..>3979)
                     /locus_tag="VIQ50_04295"
     CDS             complement(2806..>3979)
                     /locus_tag="VIQ50_04295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HEY9359631.1"
                     /translation="LAYVLAVAVEYLRALEAGGIALDAARGMIYFRLAADVDEFLTIA
                     KFRALRTLWARIEQTCGLAPAPPWVAAETAWRMMTRRDPHVNMLRTTIAVVAAGLGGA
                     DAITVLPFTMALGLPDRFARRIARNTQLVLLEESHLAKVTDPAAGAGGLENLTEQLCR
                     AAWGRFQEIEQVGGAWAALEQGIIQNKVAAVRVERQAAVAKRKDAITGTSDFSNLAET
                     PASVLDVAQVALPRPSASEFEALPSIRLAEPFEQLRDASDGILARSGSRPKVFIANLG
                     TPADFTARVTFAKNFFAAGGIEATDNEGFASREEMVEAFRAAGANLACLCSSDEAYAR
                     EAVAAAQALRRAGASVWLAGRPAALESELRHAGVSGFIFAGCDVLAALRAAYSLVA"
BASE COUNT          717 a         1298 c         1265 g          699 t
ORIGIN      
        1 gctggcactg gattcgcgct ggtgacggac cacattccgg aattcagcaa gcgcggcctc
       61 tgcgctcgcg atcccaagca cgcgctcgcc gatgacatcg caatgcgcat gccgcgcaaa
      121 ggaggcaatg gcgacgcctt caagccctat tcgccggccg ctgcgctgcc ctacgctcac
      181 caatggcggc tgtttcgcac gccaaacgac gccttcctgg cggccaatac gcatcgggaa
      241 ggtacgccgc tgttcgacat cttgcagccg gcctacgccg cactttacag cggcgcgatc
      301 cacccgaccg cggaggcgca cgccatcgtc gccgatcacg tcatgcggca cgtgcgcgtg
      361 ctggtcgaac agccggacgt gaatcaagct cccacgcagg atggcgccca ctgagcacgc
      421 ggggcgaatg cagcgttaaa agccgcatcc atccgaggga gagatcactc cgccgcttgc
      481 tgcccgtggc cgagccgtcg attgagcttg tggagcaagg tctcggccgc ctccgcgatc
      541 accgtaccgg gagggaagat cgcctcggcg ccggcacgct tgaggtcttc atagtcctgc
      601 ggcggcacca cgccgccgac aacgatcata atatcgtcgc ggccctcctt gacgagcgcg
      661 gccttgagct gtggaacgag cgtgaggtgc gccgccgcga gcgaggacac gccgagcacg
      721 tgaacgtcgt tctcgacggc ttggcgcgcc gcctccgtcg gcgtggcgaa cagcgggccg
      781 atatcgacgt cgaagccgag atcggcgaaa gcggtcgcga tcaccttttg cccgcgatca
      841 tggccgtcct ggccgatctt ggccaccagg atgcgcggcc ggcggccctc attgatctcg
      901 aattcgctga cgagcttgtg cacgcgcgca accgcttcgg acatggcgcc gacctcccgt
      961 ttgtagacgc ccgtgatcgc cttgatctcc gcccgatgcc ggccgaacac ctgttccagc
     1021 gccgatgaga tttcacccac cgtcgccttc gcacgcgccg cgtcgatggc gagcgcgagc
     1081 aggttgccat tgccgcccgc ggcgctgcgt gtgagcgcgg ccaaagcatc ctcgaccgcc
     1141 ttcgcatcgc gttcgcgctt gagacgcgag agcttctcga tctgcgatcg gcgcactgcg
     1201 gcgttgtcga ctttgagcaa gtggactggg gcctcccgtt cgggccgata tttgtttacg
     1261 ccaatgaccg cctgctcgcc tgcgtcgatg cgcgcctgcg tcttagccgc ggcctcttcg
     1321 atacgaagct tcggaaggcc cgcctcgatc gctttggcca tcccgcccat ttcctcgatt
     1381 tcctggatgt ggcgccaact ggccttggcg agctcatgcg taagccgttc cacgtagaac
     1441 gatccgcccc agggatcgat cacgcgcgtt gtgccgcttt cctgctgcag cacgatctgc
     1501 gtgttgcggg cgatgcgggc ggaaaaatcg ctgggtaggg cgagcgcttc atcgagggcg
     1561 ttggtgtgca gcgattgggt gtggccctgc gtcgccgcca tcgcctcgat cgcagtccgt
     1621 gccacgttgt tgaacacgtc ctgggcggcg agcgaccagc ccgaggtttg acagtgggtg
     1681 cgcagcgaca gcgagcgcgc atccctcggc tcgaaccgct tcatcagctt cgcccagagt
     1741 aggcgggccg cgcgtagctt tgccacctcc atgaagaagt tcatgccgat ggcccagaaa
     1801 aatgagatgc ggggagcgaa ccgatcgaca tcgagtcctg ccctcaagcc cgcgcgcaca
     1861 tattcgacgc cgtcggccag cgtataggcg agctcgagat cctgcgtcgc acccgcttcc
     1921 tgcatgtggt agccggaaac cgagatcgaa ttgaatttgg gcatgtgcgt tgcggtgaag
     1981 gcgaaaatgt ccgagatgat gcgcaacgac ggctcgggcg ggtaaatgta ggtgttgcgc
     2041 accatgaatt ccttgaggat gtcgttctgt atcgtgcccg agagttgatg cggcttcacg
     2101 ccctgctcct cggcggccac gatatagagc gcgagcaccg gcaggacggc gccgttcatg
     2161 gtcattgaca cggacatctg atcgagcggg atgccggcga acagagtgcg catgtcatag
     2221 atggaatcga tcgccacacc cgccatgccg acgtcgccgg cgacgcgagg atgatcgctg
     2281 tcatagccgc ggtgggtggc gagatcgaag gcgactgaaa gtcctttttg cccggcagca
     2341 agattgcggc gataaaaggc attcgaatcc tcggccgtgg agaaaccggc atattgccgg
     2401 atcgtccatg gctgcgtgac gtacatagtc ggatacggtc cgcgcagata aggcgggatg
     2461 ccgggaaagg tttggagaaa gtcgagcgat ctgacgtcct cggccccata gactggcttc
     2521 accgggatgc cttccggcgt gagccacgca ccgtcggccg gtgccggctt cggcgccgca
     2581 cccgcgaaat caaccgaggc gaaattcggg atgcggctca tgatttctac cgctcgagcg
     2641 ccgctttcgc cgtaactcgc gattggaccg atcgttaaca ggccggcacc gcgcccactc
     2701 agcggctaac gaagtcgcgg gccgatagtc gcacgctatg cagcatatat cgttcctctt
     2761 ccagcgtcgc cacccctcgg gccactgcca tcgcgcgcgg cgtcatcaag caacgagact
     2821 gtaggctgcc cgtagcgcgg ccagcacgtc acagccggcg aagataaaac cggaaacgcc
     2881 ggcgtgcctg agctcactct ccagcgcggc gggtcggccg gcaagccaga ccgaagcgcc
     2941 ggcgcggcgc aatgcctgcg ccgccgcgac cgcctcacgt gcataggcct cgtccgacga
     3001 gcacaggcag gcgagattgg cgccagcggc tctgaatgcc tcgaccattt cttcgcgact
     3061 ggcaaagcct tcgttgtccg tcgcctcgat gccgccggcg gcaaagaaat tcttggcaaa
     3121 ggttacgcgc gcggtgaaat cggcgggcgt gccgagattg gcaatgaaca ctttgggccg
     3181 cgatccgctg cgggcgagta tcccatcaga tgcatcgcgc agctgttcga acggctcagc
     3241 gagccgaata ctcggcaacg cttcgaactc ggacgcggag gggcgcggca gcgctacctg
     3301 cgccacgtcg agcaccgacg cgggcgtctc ggcgagattg gagaaatcgc tggtgccggt
     3361 gatcgcatct tttcgcttag ccacggcggc ctggcgctcg acgcgcacag ccgcaacctt
     3421 gttctggatg atgccttgtt cgagggcggc ccacgcgccg ccgacctgct cgatctcctg
     3481 aaatcgaccc caggctgcac gacagagttg ctcggtcaag ttctcgaggc cgccggcccc
     3541 cgccgcggga tccgtgacct tcgcaagatg tgattcttcg agcagcacga gctgagtatt
     3601 gcgggcaatt cttcgcgcga accggtcggg cagaccgagc gccatggtga acggcagcac
     3661 ggtgattgca tcggcgccgc cgagcccggc ggcaacgacc gcgatggtcg tgcgcaacat
     3721 gttcacatga ggatcgcgcc tcgtcatcat ccgccatgcg gtctcggccg caacccacgg
     3781 cggcgcgggc gcaagcccgc aggtctgctc gatacgcgcc catagcgttc gcaacgcccg
     3841 gaatttggcg atggtcaaga actcatcgac atcggccgcc aggcggaaat agatcatgcc
     3901 gcgagcggca tcgagtgcga ttccgccggc ttcgagggcg cgcagatatt caaccgccac
     3961 cgccaagacg taagcgagt
//
LOCUS       DATCWM010000219         2647 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_18134, whole genome shotgun sequence.
ACCESSION   DATCWM010000219 DATCWM010000000
VERSION     DATCWM010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2647
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18134"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..658
                     /locus_tag="VIQ50_04300"
     CDS             <1..658
                     /locus_tag="VIQ50_04300"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9359632.1"
                     /translation="ELARCKHELGFPGVVITSETNGLYLDAAEFEPFWAECARLGLFV
                     FIHPALKLNQTQQFDGYDMARSVGREFSLVMATIRLINAGVFDRHPALTVHMSHLGGG
                     IAALLGRVRSYQDKDFWGTADNARHGKTPERDFDHYLRHNIMFDTAGFCGALGAVRGA
                     LIEIPASRIVFATDYPQEIRDRAAVRDFVMELRALGKDGEAILSGNVDKLLKQPAKAA
                     "
     gene            complement(794..1240)
                     /locus_tag="VIQ50_04305"
     CDS             complement(794..1240)
                     /locus_tag="VIQ50_04305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host attachment family protein"
                     /protein_id="HEY9359633.1"
                     /translation="MQKLKIRQGDWVVVCDGKKGLVLENAGDEKFLNLKTREVYEHSD
                     SKTRELGTDAPGRTFNSVGAGRSAIEPTDWHVQEEDRFLRKLAERLDAAVNAGEAKAL
                     ILIAPPRALGVLRQTYSHGLRAALRAEIDKDFVRLPVHEIEKHLAG"
     gene            complement(1322..>2647)
                     /locus_tag="VIQ50_04310"
     CDS             complement(1322..>2647)
                     /locus_tag="VIQ50_04310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY9359634.1"
                     /translation="EIVRPADLGVAVESVATRLAGPLQALAASQAEHRARLVELMRAH
                     HDAAIGDCGLDETLATIREEMRKFADSEVAPQAQQWHRTNSYIPLDIIAQMSELGVFG
                     LTIPQNYGGLGLGKESMCVVSEELSRGYIGVGSLGTRSEIAAELIIGGGTEEQKDRWL
                     PKLASGEVLPTAVFTEPNSGSDLASIKTRAVREGDVYKVYGNKTWITHPVRADLMTLL
                     VRTNPSEPGYRGLSMLLAEKPRGTDDNPFPAAGMSGTEIEVLGYRGMKEYEIAFDGFE
                     VKAENLLGGVEGLGFRQLMQTFESARIQTAARAIGVAQAAMEQAFGYAQERRQFGAPV
                     IGFPRVADKIAMMAVEIMIARQLTYFAARQKDSGKRCDLEAGMAKLLAARVAWANADN
                     AVQIHGGNGFALEFPISRILCDARILSIFEGAAEIQAQVIARRLLSAGN"
BASE COUNT          454 a          864 c          836 g          493 t
ORIGIN      
        1 cgagctcgcc cgctgcaagc acgagctcgg ctttcccggc gtggtgatca cgtcggagac
       61 caacggcctt tatctcgatg cggccgagtt cgagccgttc tgggccgaat gcgcgaggct
      121 gggcttgttc gttttcatcc acccagcgct gaagctcaat cagacgcagc agttcgacgg
      181 ctacgacatg gcgcgttcgg tcggccgcga attctcgctg gtcatggcga ccattcggct
      241 gatcaacgcc ggcgttttcg accgtcaccc ggccctgacg gtgcacatgt cgcacctcgg
      301 cggcggcata gccgcgctgc tcggccgcgt ccgctcgtat caggacaagg acttctgggg
      361 gacggccgac aacgcccgcc acggcaagac gccggagcgt gatttcgacc attacctgcg
      421 gcacaatatc atgttcgata ccgcgggctt ctgcggagcc ctgggcgccg tgcggggcgc
      481 attgatcgaa atcccggcgt cgcgcatcgt tttcgccacc gattatccgc aggaaatccg
      541 cgaccgcgcg gcggtgcgcg atttcgtgat ggagctgcgc gcgctcggca aggatggcga
      601 ggcgatcctg tccggcaatg tcgacaagct cttgaagcag cccgcgaagg cggcgtagcg
      661 cgcacacggc actctgccac ggagcaaggt gcaagcagat cgacgaacga gcccgttgtg
      721 ggcgtggagc gggaagctca acgatcgaga gattgcagct ggccagcggc aagtcacccg
      781 tcggccggcg cagtcaccct gcgagatgct tctcgatctc gtgcacgggg agcctgacga
      841 aatccttgtc gatttcggcg cgtagcgcag cacgcaggcc atgggaatag gtttgccgca
      901 gcacgccgag cgcgcgcggc ggtgcgatga ggatcaacgc tttggcctct ccggcattga
      961 cggcggcgtc caggcgctcg gcaagcttgc gcaggaacct gtcttcctcc tgcacatgcc
     1021 aatcagtcgg ctcgatcgca ctgcggcctg ctcccaccga gttgaaagtg cggccgggcg
     1081 cgtctgtccc caattcccgc gtcttcgaat cggaatgctc gtaaacctcc ctggtcttga
     1141 ggttgaggaa tttttcatca cccgcgttct ccagcaccag gcctttcttg ccgtcgcaca
     1201 cgacgaccca gtcgccttgg cggattttga gcttttgcat gtgataaacc tctgggctcc
     1261 gaccaaccgt gggcgctttt tccgagcgat tgctccgcgg agccaacgcc gccggggcga
     1321 ttcagttgcc cgccgagagc aatcgccgcg caatgacctg cgcctggatt tctgctgcgc
     1381 cttcgaaaat gctgagaatg cgcgcgtcgc acaggatgcg cgaaatggga aattcaagcg
     1441 cgaaaccgtt tccgccgtga atttgcaccg cgttatcggc gttcgcccag gcgacgcggg
     1501 cggccaagag cttggccatg cccgcctcga gatcacaacg cttgcccgag tctttttgcc
     1561 gcgctgcgaa ataggtcaat tgccgcgcga tcatgatctc gaccgccatc atcgcgatct
     1621 tgtcggcgac gcgcgggaag ccgatgaccg gcgcgccaaa ttgccgacgc tcctgggcat
     1681 agccaaaggc ttgctccatg gccgcttgcg ccacgccgat cgcgcgcgct gcggtttgga
     1741 tgcgcgccga ttcgaaggtc tgcatcagtt gccgaaaacc cagcccctcg acgccgccaa
     1801 gcaagttctc agccttcacc tcgaaaccgt cgaaagcaat ctcgtactcc ttcatgccgc
     1861 gataaccgag aacttcgatc tcggtgcccg acatgcccgc ggccgggaac ggattgtcat
     1921 cggtgccgcg aggcttctcg gccagcagca tggagaggcc gcggtaaccg ggctcgctcg
     1981 gattggtgcg cacgagcagc gtcatcaggt cggcgcgcac gggatgcgtg atccaagtct
     2041 tgttgccgta aaccttgtag acgtcgccct cccgcaccgc ccgcgtcttg atcgaggcga
     2101 gatcggagcc gctattgggt tcggtaaaga cggcggtcgg caatacctcg cccgaggcga
     2161 gcttcggcag ccatcgatcc ttttgttctt cggtgccgcc gccgatgatc aactctgcgg
     2221 cgatctcgga acgggtaccc agcgagccga cgccgatata gccgcgcgag agctcctccg
     2281 agacgacgca catcgattcc ttgcctagcc cgaggccgcc gtagttctgc gggatcgtga
     2341 ggccgaagac gccgagctcc gacatctgcg cgatgatgtc gagcgggata tagctgttgg
     2401 tgcggtgcca ctgctgcgcc tgcggtgcga cctcgctgtc ggcgaacttg cgcatctcct
     2461 cgcggattgt cgccagcgtc tcgtccaggc cgcagtcgcc gatggcggcg tcgtgatggg
     2521 cgcgcataag ttcgaccaga cgggcgcggt gctcggcctg cgacgcggcg agcgcctgca
     2581 gcgggcctgc caggcgcgtg gcgaccgact ccacagctac ccccagatcg gcggggcgca
     2641 cgatctc
//
LOCUS       DATCWM010000220         2150 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_396021, whole genome shotgun sequence.
ACCESSION   DATCWM010000220 DATCWM010000000
VERSION     DATCWM010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2150
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_396021"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1537)
                     /gene="groL"
                     /locus_tag="VIQ50_04315"
     CDS             complement(<1..1537)
                     /gene="groL"
                     /locus_tag="VIQ50_04315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509708.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEY9359635.1"
                     /translation="MAAKEVKFSVDARDKMLRGIDILNNAVKVTLGPKGRNVVLDKSF
                     GAPRISKDGVTVAKEIELEDKFENMGAQMVREVASKTSDIAGDGTTTATVLAASIVKE
                     GAKSVAAGMNPMDLKRGIDLAVNAVIEDLKKNSKKVTSNEEIAQVGTISANGDAEIGR
                     FLAEAMKKVGNEGVITVEEAKSLETELDVVEGMQFDRGYISPYFVTNADKMRVEMEDP
                     YVLINEKKLSGLQELLPLLESVVQTGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAV
                     KAPGFGDRRKAMLQDIAVLTGGQAISEDLGIKLENVALNMLGRAKKVTIDKENTTIVG
                     GAGKKADIEARITQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKER
                     KDRVDDAMHATRAAVEEGILPGGGVALLRATEVLKKVRAHNDDQKTGIDIVRKALSSP
                     ARQIAINAGEDGSVIVGKILEKDQYAFGFDAQTGEYGNLVSKGIIDPTKVVRTALQDA
                     ASVA"
     gene            complement(1587..1901)
                     /locus_tag="VIQ50_04320"
     CDS             complement(1587..1901)
                     /locus_tag="VIQ50_04320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HEY9359636.1"
                     /translation="MKFRPLHDRVVVKRIDAEEKTAGGIIIPDSAKEKPSQGEITAVG
                     PGGRDEAGKLIPIDIKVGDRVLFGKWSGTEVKIDGEELLIMKESDVMGVIEEGVARKK
                     AA"
BASE COUNT          328 a          691 c          659 g          472 t
ORIGIN      
        1 ccgcaaccga agccgcgtcc tgcagcgcgg tgcgcaccac cttggtcgga tcgatgatgc
       61 ctttcgacac caggttgccg tactcgccgg tctgcgcgtc gaagccgaac gcgtactgat
      121 ccttttccag gatcttgccg acgatcacgg agccgtcttc gccggcgttg atcgcgatct
      181 gccgcgccgg cgatgagagc gccttgcgca cgatgtcgat tccggtcttc tggtcgtcgt
      241 tgtgagcgcg caccttcttg agcacctcgg tggcgcgcaa gagcgcaacg ccgccgcccg
      301 gcaggatgcc ttcctcgacc gcggcgcggg tcgcgtgcat cgcgtcatcg acgcgatcct
      361 tgcgctcctt cacttcgacc tcggtcgcgc cgccgacgcg gatcaccgcc acgccgccgg
      421 cgagcttggc gagccgctcc tgcagcttct cgcggtcgta gtcggaggtg gtttcctcga
      481 tctgcgcttt gatctgcgtg atgcgggcct cgatgtccgc cttcttgccg gcgccgccga
      541 cgatcgtggt gttctccttg tcgatggtca ccttcttggc gcggcccagc atgttgagcg
      601 cgacgttctc gagcttgatg ccgagatcct cggagatcgc ctggccgccg gtgaggacgg
      661 cgatgtcctg cagcatggcc ttgcggcggt cgccgaagcc gggcgccttg acggcggcga
      721 ccttgagccc gccgcgcagc ttgttcacga ccagcgtggc cagggcctcg ccctcgacgt
      781 cttcggcgat gatgagaagc ggcttgccgg tctgcaccac cgattccaac agcgggagca
      841 gctcctgcag accggacagc tttttctcgt tgatgagaac gtaggggtcc tccatctcga
      901 cccgcatctt gtcggcgttg gtgacgaaat acggcgagat gtaaccgcgg tcgaactgca
      961 tgccttcgac cacgtcgagc tcggtctcca gcgatttcgc ctcttccacc gtgatcacgc
     1021 cttcattgcc caccttcttc atcgcttcgg cgaggaagcg gccgatctcg gcgtcgccgt
     1081 tggcggagat ggtgccgact tgagcgatct cctcgttcga ggtgaccttc ttcgagttct
     1141 tcttgaggtc ctcgatcacg gcgttgaccg cgagatcgat gccgcgcttg aggtccatcg
     1201 ggttcatgcc ggcggcaacc gacttggcgc cttccttgac gatggaggcg gcgagcacgg
     1261 ttgcggtggt ggtgccgtcg ccggcgatgt cggaggtctt ggaggcgacc tcgcgcacca
     1321 tctgcgcgcc catgttctcg aacttgtcct cgagttcgat ttccttggcg acggtcacgc
     1381 cgtccttcga gatgcgcggc gcgccgaagc tcttgtcgag cacgacgttg cggcccttag
     1441 gaccgagcgt caccttcacc gcattattga ggatgtcgat cccgcgcagc atcttgtcgc
     1501 gcgcgtcgac cgagaatttg acttccttgg cagccatagc agttgtctcc gaaatgatgt
     1561 tctaaggggc gaggcgatga atggcgtcag gcggccttct tcctggcgac gccctcttcg
     1621 atgacgccca tgacgtcgct ctccttcatg atcaggagct cttcgccatc gatcttgacc
     1681 tcggtgcccg accattttcc gaacagcacc cggtcgccga ccttgatgtc gatcggaata
     1741 agcttgccgg cctcgtcgcg gccgcccggg cccacggcgg tgatttcgcc ctgcgagggc
     1801 ttttccttgg cactgtccgg aatgatgatg ccgccagcgg tcttctcttc ggcgtcgatg
     1861 cgcttgacca cgacgcgatc gtgaagcgga cgaaatttca tgggatcctc cttaagtttc
     1921 tgaaaatgtt atgatttgtg aattggcagt tgggaacagc gagtgctatt cacgccgcaa
     1981 ataagcccgc ttggcggact cgcaagaccc taccgaaacg atattcggct cgccgtgatg
     2041 cccaggccct cacccaattg actacggttt tggaaaggcg ctcggcgtgt gccgaagcgc
     2101 gattggacgg tgggcaccgt aacgatgccg cagaagcctg cagctagacc
//
LOCUS       DATCWM010000221         2660 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_374490, whole genome shotgun sequence.
ACCESSION   DATCWM010000221 DATCWM010000000
VERSION     DATCWM010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2660
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_374490"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(33..824)
                     /locus_tag="VIQ50_04325"
     CDS             complement(33..824)
                     /locus_tag="VIQ50_04325"
                     /inference="COORDINATES: protein motif:HMM:TIGR04282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04282 family arsenosugar biosynthesis
                     glycosyltransferase"
                     /protein_id="HEY9359637.1"
                     /translation="MRSAIVDLGNAKVPACGIAAMAKASVPGRTKTRLVPPLSFEQAA
                     QCNTAFVRDIAENILAAAAQTSIAGYVAYGPADAQPFFQANLPPDIGLIEACYPSLGA
                     CLDHAIAQLFERGHRAAVVVNSDSPTLPISLLLEAAEVLARPGDRAVLGPALDGGYYL
                     LGLKAQHRRLFEDIAWSTQHVARQTRERAAELRLPMHILPTWYDVDDVSALKMLVAEL
                     FEGQSFAPALRPAQPRHTRALFQSLVGSSELKDRLALDVFRRAAE"
     gene            complement(1104..1568)
                     /locus_tag="VIQ50_04330"
     CDS             complement(1104..1568)
                     /locus_tag="VIQ50_04330"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016279 - protein-lysine
                     N-methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SET domain-containing protein"
                     /protein_id="HEY9359638.1"
                     /translation="MPARLSPSRHLRIGRSRAGLGLFALVAIKKGQFIVRYSGRKITT
                     EVADQLDTRYLFEVNSRWTIDGANRKNRARYINHSCRPNAEVYFVKHVIKIRAIKNIK
                     PGDEITYHYGRDYFDSFIKGVGCKCRACRKKRAEKRAEMRARRARRKARRHR"
     gene            1775..>2660
                     /locus_tag="VIQ50_04335"
     CDS             1775..>2660
                     /locus_tag="VIQ50_04335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY9359639.1"
                     /translation="MQAYDVVIIGAGHNGLTCAAYLGMAGLKVKVLERRAIVGGAAVT
                     EEFHPGFRNSVAAYAVSLLNPKIIADLQLFDYGLKIVERRAQNFLPTLDGRSLLAAQG
                     RTESNIAKFSASDAERYAAFARELDSSADLLRDFVLQAPPNLTRGAKLAGLGEMLKAG
                     RLGNRLRRLSTENLQTLFDLITKSAGDYLDGWFQGELVKAWLGFDAIVGNYASPYTAG
                     SAYVLLHHAFGEVNGKKRLWGHAVGGMGAITQAMARAAAAHGADIATDAPVREVLIEK
                     GRAAGVVLDDGRAIRGNAV"
BASE COUNT          487 a          820 c          861 g          492 t
ORIGIN      
        1 cagcagcggc caatcgagcc cggcgacccg tttcactcgg cggccctccg gaatacatcg
       61 agggcgagtc gatccttgag ttccgaactc ccgaccaacg actggaacag cgcacgggta
      121 tgccgcggct gcgcgggacg aagggccgga gcgaaggact gcccctcgaa caactctgcc
      181 acaagcattt tcaacgccga gacgtcgtct acgtcgtacc acgtgggcag aatatgcatg
      241 ggcagacgca attcggcggc gcgctctcgg gtttgtcgcg cgacgtgttg cgtgctccag
      301 gcgatgtcct cgaacagccg gcgatgttgc gccttgaggc caagcaggta gtagccgccg
      361 tcaagcgccg ggcccagcac tgcccggtcg cccggccgcg caagcacctc ggcggcttcg
      421 agcaggagcg agatgggcag cgtcgggctg tcggagttga cgaccaccgc ggcgcgatgg
      481 ccgcgttcga acagttgcgc aatggcatgg tcgaggcacg ctccgagaga cgggtaacaa
      541 gcttcgatga gcccgatgtc cggcggcaga ttggcttgaa agaacggttg cgcatcagcg
      601 ggtccgtagg cgacgtaacc ggcgatcgag gtctgcgccg cggcggcgag aatgttctcg
      661 gcaatatcgc gcacaaatgc ggtgttgcat tgcgcggctt gctcgaagct caggggcgga
      721 accaagcgcg ttttggtgcg tcccggcacc gatgccttgg ccatcgcggc gatcccgcag
      781 gccgggactt tggcgttgcc gaggtcgacg atggcgctgc gcatgatcac tcccatcctc
      841 gcgatacgcc agcgatgctc ggttggtgca gcggaattca caacaacgat tcgcgccgca
      901 tggccagcct accgcgtcga ggcaagggcg gcggcgccga tcggctcaca cattcgtgag
      961 cgcgagttca cacgatcatt tctactgctt agggggctcg aggggaaggc gcgccgccga
     1021 gagccgaccg aggtatcaaa ttttgcgacc cgtatcggcg cgtgcccggg agtccataag
     1081 tggcggcgaa cctcgaggcc tactcaccgg tggcgtcttg ccttccgcct ggctctgcgc
     1141 gcgcgcatct cggcacgctt ttccgcacgc tttttgcggc aggccctaca cttgcagccg
     1201 acgcctttga taaatgaatc gaaatagtcg cggccgtagt gataggtgat ctcgtctccg
     1261 ggcttgatgt ttttgatcgc ccggatcttg atgacgtgtt ttacgaaata aacttcggca
     1321 ttggggcgac aggaatggtt gatgtagcgc gcccggtttt tacggttggc gccgtcgatc
     1381 gtccagcggc tgttgacttc gaaaagatag cgggtatcga gctggtcggc gacttcggtc
     1441 gtaatcttcc ggccgctgta gcgaacgatg aattgtccct tcttgatggc gaccagggcg
     1501 aagagaccca ggccagctct ggatcggccg atccggagat ggcgcgacgg tgacagtctt
     1561 gcgggcatga gattatatat attccccgat ggcgatccgc tgccaagggg atcagcattg
     1621 ccgcgctcga tcctgacgat ccaagcgcag gactccggca cgcggtgaga ttcgaatcgg
     1681 ttccgttcgc acgagcatac cgggaagtct tggagcaagg ccacccatca ctcactccgc
     1741 tccactcact cgtctcttga gctagcgctt ctcgatgcag gcgtacgacg tcgtcatcat
     1801 cggtgcaggt cacaacgggc tgacttgcgc cgcctacctc ggcatggctg gtctgaaagt
     1861 caaggtgctc gaacgccgag cgattgtggg cggcgcggcg gtgacggaag agtttcatcc
     1921 cggtttccga aactcggtcg ctgcctacgc ggtgagtttg ttgaacccga agatcatcgc
     1981 cgatcttcag cttttcgatt acggcctcaa gatcgtcgaa cggcgcgcgc aaaacttcct
     2041 tccgaccttg gacggccgct ccctgcttgc cgcgcagggc cgcaccgaga gcaatattgc
     2101 gaagttcagc gccagcgacg ccgaaagata cgccgccttc gcccgcgagc tcgatagcag
     2161 cgccgacctt ttgcgcgatt tcgtcctgca agcgccgcca aacctcacgc ggggcgcaaa
     2221 actcgcgggc ctcggcgaga tgctcaaggc tggacgcctg ggcaaccggc tgcgccggct
     2281 ctccacggaa aatctgcaga cgctgttcga cctgatcacg aaatcggccg gcgattatct
     2341 cgacggctgg ttccagggcg aactggtgaa ggcctggctc ggcttcgacg ccatcgtcgg
     2401 aaactacgca agcccgtaca cggccggcag cgcctatgtt ctcctgcatc acgccttcgg
     2461 tgaggtgaac ggcaaaaagc gcctctgggg gcacgccgtc ggcggcatgg gcgcgatcac
     2521 gcaagcgatg gcgcgggcag ccgcagccca tggcgcggac atcgcgaccg acgcgcccgt
     2581 tcgcgaggtc ttgatcgaga agggcagggc cgccggcgtc gtgctcgacg acggccgggc
     2641 gattcgcggc aacgcggtcg
//
LOCUS       DATCWM010000222         2721 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_288144, whole genome shotgun sequence.
ACCESSION   DATCWM010000222 DATCWM010000000
VERSION     DATCWM010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2721
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_288144"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..502)
                     /locus_tag="VIQ50_04340"
     CDS             complement(<1..502)
                     /locus_tag="VIQ50_04340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HEY9359640.1"
                     /translation="MNARPTDRLAIAIGQLNPIVGDIAGNADKARRARAEAAGAGADL
                     LALPELFLSGYPPEDLVLRPAFQAACRAKIEELARETADGGPALLIGTPWLEEGKLYN
                     AYCLLDRGVIAAVRLKVNLPNYGVFDERRLFAAGPPPGPVNFRGVRLALPICEDIWTE
                     WGDYEDV"
     gene            complement(556..909)
                     /locus_tag="VIQ50_04345"
     CDS             complement(556..909)
                     /locus_tag="VIQ50_04345"
                     /EC_number="2.7.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004143 - ATP-dependent diacylglycerol
                     kinase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HEY9359641.1"
                     /translation="MERLLRATINSWRGLLAAARSEEAFRLELIALVLAIPVAFLLAE
                     QAWKRLALIAVVAFVLVVELLNTAIEKLADRVNLAIDPQIGRVKDMGSAAVGLALLIA
                     AMAWLLALAERIGLI"
     gene            complement(1006..2166)
                     /locus_tag="VIQ50_04350"
     CDS             complement(1006..2166)
                     /locus_tag="VIQ50_04350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HEY9359642.1"
                     /translation="MHRHTPWLGALSLAASISLSSGASGQLAVSANDGKAVLTDGVNS
                     VPANPPQDTVTLIDLNAKPPKVVGEIEAPTSVIGPPLSVAVARDESFALVTAASKIDP
                     ADPKKTVPDDKLSVIDLKASPPKVSAQLQAGKGAAGVSINRAGTLALVANRSEGTVSV
                     FSIAGQTLTPVGKISLGDDKSGPSHVAIAPDGKTALVTRDNDHKISVLSIDGTKVEYT
                     KRDISAGLRPYGIGIHPNGKLAVVANIGTGSGDADTVSLIDIEAKPARVVQTVTVGPT
                     PEGIALSPDGAFVAVGVMNGSNKPKADPFFTDYGLVKVLSVKGNELVPLTEAKVGHWC
                     QGFAWSKDNRTLLVQCMVENEIMVFDFDGKALKPAGSIKVGAGPAAIRTAEP"
     gene            complement(2305..>2721)
                     /locus_tag="VIQ50_04355"
     CDS             complement(2305..>2721)
                     /locus_tag="VIQ50_04355"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008139623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HEY9359643.1"
                     /translation="ADKVGDQLPAMIRAVKREGKIVVWSCDPMHGNTITSVTGYKTRP
                     FDRILSEVKTFFAIHRAEGTHGGGVHLEMTGQNVAECTGGARMITDADFKDRYHTVCD
                     PRLNAEQSIDLAFLLADLLKAERTARARPLPAAAGL"
BASE COUNT          465 a          886 c          899 g          471 t
ORIGIN      
        1 ccacgtcttc gtagtcgccc cattctgtcc aaatgtcttc gcagatgggc agggcgaggc
       61 gcacgccgcg gaagttgacc ggtccgggcg gcggccctgc agcgaacagc cgccgctcgt
      121 cgaagacgcc gtagttcggc aggttcacct tcagccgcac ggcggcgatg acgccgcggt
      181 cgagcaggca ataggcgttg tagagcttgc cttcctcgag ccatggggtg ccgatcagca
      241 gcgccggccc gccgtcggcg gtttcacgcg caagctcctc gatcttggcg cggcacgcgg
      301 cctggaacgc cggcctgagc acgagatcct cgggcggata gccggagaga aacagttccg
      361 gcagcgccaa gagatcggcg ccggcgcctg cggcctcggc gcgcgcgcgg cgcgccttgt
      421 cggcgtttcc ggcgatgtcg ccgacgattg gattgagttg cccgatggcg atagccaagc
      481 ggtcagtggg acgcgcattc atggcttagg tctagcgcgt cgtggccgcg cccggcaatc
      541 gccgtgcagg tccggtcaga tcagcccgat tcgctcggca agcgccaaca gccaagccat
      601 ggcggcgatc agcagcgcca ggccgaccgc ggccgagccc atatccttga cccggccgat
      661 ctggggatcg atcgcaaggt tgacccggtc ggcaagcttc tcgatcgcgg tgttcaacag
      721 ttccaccacg agcacgaaag ccacgaccgc gatcagcgca aggcgcttcc aagcctgctc
      781 ggcaagcagg aaggcgaccg gtatcgccag gacgagggcg atcagctcca ggcgaaacgc
      841 ctcctcgcta cgcgccgctg cgaggaggcc acgccagctg ttgatggtag cgcgcagcaa
      901 ccgttccatg ggagtgcgac gcagccggct ccaggtcagc acgtatcccc cagcgcgcgc
      961 gggtcgcgct tgccgagctc aaacaatgcg ggcggcggga gcaggttacg gctccgccgt
     1021 tcggatcgct gcgggcccgg caccgacctt gatcgatcca gcgggcttga gcgctttgcc
     1081 gtcgaaatcg aacaccatga tctcgttctc gaccatgcac tgcacgagga gcgtgcggtt
     1141 gtccttgctc caggcgaacc cctgacacca gtggccgact ttggcctcgg tcagcgggac
     1201 caattcgttg ccttttacgc tcagcacctt cactagcccg taatcggtga agaacgggtc
     1261 ggctttgggt ttgttggagc cgttcatcac gccaacggcg acaaaggcac cgtcgggaga
     1321 cagcgcaatc ccttccgggg ttgggccgac ggtgacggtt tgaacgaccc gcgccggctt
     1381 tgcctcgatg tcgatgaggc tcacggtgtc ggcgtcgcca cttccggtac cgatattggc
     1441 gaccaccgcg agcttgccgt tgggatggat gccgatcccg taaggccgca gtccggccga
     1501 gatgtcgcgc ttggtgtact cgaccttggt gccgtcgatc gacagcacgg aaatcttgtg
     1561 atcgttgtcg cgggtcacca gcgccgtctt gccgtccggt gcaatggcga catgggacgg
     1621 tccggacttg tcgtcgccca ggctgatctt gcccaccggc gtcagcgtct ggccggcgat
     1681 agaaaacacc gagaccgtgc cctcggagcg gttcgcgacc agcgccagcg tgccggcccg
     1741 attgatcgat acgccggcgg cgcctttacc ggcctgcaac tgcgccgaga ccttgggcgg
     1801 cgaggctttg agatcgatca ccgagagctt gtcgtccggc acggtcttct taggatcggc
     1861 cggatcgatc ttggatgccg cggtgaccag cgcgaaactc tcgtcgcgcg ccaccgccac
     1921 gctcagcggc gggccgatca cgctggtcgg agcctcgatc tcgccgacga ccttgggcgg
     1981 cttcgcattg agatcaatga gcgtaaccgt gtcttgcggc ggattggccg gcaccgaatt
     2041 cacgccgtcg gtgagaacgg ctttgccgtc gttggcggaa accgcaagct ggccgcttgc
     2101 cccggacgac agcgagatcg aggcggcgag cgaaagcgcg cctagccaag gcgtatggcg
     2161 atgcatgagg acctcccgtt acgcggatcg ttgtggtttg cgaaagcgcc gcgcacctgc
     2221 ccgcattcca tcataagaac caattgcgca aaacccccgc tacgggatcg ggaagaagga
     2281 taggcaaaat cgctgcagct ccggtcagag cccggccgcg gccggcaacg gccgcgccct
     2341 ggcggtgcgc tccgccttga gcaggtcggc aagcagaaac gcgaggtcga tcgattgctc
     2401 ggcgttgagc cgcggatcgc acaccgtgtg atagcgatcc ttgaagtcgg cgtcggtgat
     2461 catgcgcgca ccgcccgtgc actcggcgac gttctggccg gtcatctcca gatgcacgcc
     2521 gccgccgtgc gtcccttcag cgcggtgaat cgcaaagaag gtcttcactt ccgacaggat
     2581 gcgatcgaac ggccgcgtct tgtagccggt taccgaggtg atggtgttgc cgtgcatggg
     2641 atcgcacgac cacaccacga tcttgccctc gcgcttgacc gcgcggatca tggcgggaag
     2701 ctggtcgccc accttgtcgg c
//
LOCUS       DATCWM010000223         2000 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_282613, whole genome shotgun sequence.
ACCESSION   DATCWM010000223 DATCWM010000000
VERSION     DATCWM010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2000
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_282613"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(266..682)
                     /locus_tag="VIQ50_04360"
     CDS             complement(266..682)
                     /locus_tag="VIQ50_04360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008966538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEY9359644.1"
                     /translation="MKIHVGTTVAAPIEQVWRAYTTPADIKQWNAASDDWHTTAASVD
                     LREGGAFSSRMEAKDGSMGFDFAGTYTKIIKHKLIEYSFGDRMARVEFAPDPKGVVVR
                     VTFDSEPTHSIEQQQGGWQAILNNFARHVEANQKKS"
     gene            complement(851..1918)
                     /locus_tag="VIQ50_04365"
     CDS             complement(851..1918)
                     /locus_tag="VIQ50_04365"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9359645.1"
                     /translation="MPDQWNKYGPTAARRHGKPGRDVRPKSTTVDIHSHVAIPQAAAF
                     VKAHLDTSTIPLAHFANAETKALSQKQEEDVRARITGYDERLADLDAMGIDLQLVMPP
                     PNQCYYTVPLDIAVKAARMVNDGLAEYVARKADRFVALGTVPLIDGTEAARELERCMT
                     SLGMKGAEILTNVAGRELSEPNYAPFWEKAEALGALVVIHPNGFTEAKRFTRFYFNNV
                     IGNPLETTIALHYLIFDGVLERHPKLKILAVHGGGYLPAYAGRIDHAWGARSDAHGDL
                     PRPPTSYLRQIYFDTVVFTPYQLGELVRLYGAERIIMGTDYPFDMAEYDPIGHLAAVE
                     GLDPAAVAAIAGGNARKLLKI"
BASE COUNT          352 a          585 c          635 g          428 t
ORIGIN      
        1 ccgcgcgtgt gccgcaaacc aaggattata gctacgcggt gacgcacgat cgcgtgctac
       61 tggtaggcac gagccgcgtc gtggccggcg tctttgccga cgccgacgtg ccggtgagcc
      121 aaggccgccg agggccctaa ggcaaaattt cggctcgagc gatccacccc cgcttgaacg
      181 cgtgctttcc gacctgagtt gaggaaggcc ttgaaataga attcgcgcag cttgctctgg
      241 gcggtggccg ccctccgaca cacacttacg atttcttttg attggcttca acgtggcggg
      301 cgaaattgtt gagaatggcc tgccatcctc cttgctgctg ctcgatggag tgcgttggtt
      361 cgctgtcaaa ggtgacgcgg acgacgacgc ctttggggtc aggggcgaac tcgactcgcg
      421 ccatgcgatc gccgaacgaa tactcgatca gcttatgctt gattatcttc gtgtaggtcc
      481 cggcgaaatc gaagcccatg ctcccgtcct tggcttccat gcgcgaggag aaagcgccgc
      541 cttcgcgcaa gtcaacggaa gcagctgtcg tatgccagtc atccgatgcg gcgttccatt
      601 gtttgatgtc cgcgggtgtc gtataggccc gccagacttg ctcgatgggc gccgcgacag
      661 tggttccgac gtggatcttc atatgggtga gcctctcgct gatgagttgg aactggatta
      721 tccgccgcgt tcattcacag gtggcattga ctattttgcg gcgaaggagt ggaggcgagt
      781 gccgtgagcc ccgaaaatcc gattagcgcg atcaagaatt ttgtctgcac gtatctgtgt
      841 tgaacggcac ctatatcttc aatagcttgc gcgcattgcc gccggcgatg gcggcgacgg
      901 cggcaggatc gaggccctcg accgcggcga ggtgaccgat cggatcgtat tcggccatgt
      961 cgaaggggta gtccgttccc atgatgatgc gttccgcccc gtagaggcgc accagctcgc
     1021 cgagctgata cggcgtgaac accaccgtgt cgaaatagat ctgccggagg tagctagtcg
     1081 gcggccgcgg caaatcgccg tgcgcatcgg agcgcgcgcc ccaggcgtga tcgatgcggc
     1141 cggcataggc cggcagataa ccgccgccgt gcaccgcgag gattttcaac ttgggatgcc
     1201 gctcgagcac gccgtcgaag atcaggtaat gcagggcgat ggtggtctcg agcggattgc
     1261 cgatcacgtt gttgaagtag aagcgcgtga accttttggc ttcggtgaag ccgttgggat
     1321 gaatgacgac gagcgcgccg agcgcctcgg ccttctccca gaacggcgcg tagttcggct
     1381 cggagagctc gcgccctgcg acgttggtca ggatctccgc gcctttcatg ccgagtgacg
     1441 tcatgcaacg ctcgagctcg cgcgcagctt ccgtcccgtc gatcagtggc accgtgccga
     1501 gcgcgacgaa acgatccgcc ttgcgtgcca cgtattccgc aagcccgtcg ttcaccatgc
     1561 gcgcggcttt gaccgcgata tcgagcggca ccgtgtagta acattggttc ggcggcggca
     1621 ttaccagctg gaggtcaatc cccatggcat cgagatcggc gaggcgttcg tcgtagccgg
     1681 tgatgcgcgc gcgcacgtcc tcctcttgtt tttggctaag cgccttggtc tcggcattgg
     1741 caaaatgcgc cagtggaatc gtagacgtgt cgaggtgcgc cttgacgaag gcggcggcct
     1801 gcgggatcgc gacatgtgaa tggatgtcga ctgtggtgct cttcggcctc acgtcccgtc
     1861 ccggtttgcc gtgcctgcgc gccgcggttg gtccgtactt gttccattgg tccggcatgt
     1921 gatcgactct cgctaaagaa attatcgctg tcgtcaggcc cggaactgtt ccggccatcc
     1981 acgtctttcg ccaactaaga
//
LOCUS       DATCWM010000224         2527 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_401435, whole genome shotgun sequence.
ACCESSION   DATCWM010000224 DATCWM010000000
VERSION     DATCWM010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2527
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_401435"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..983)
                     /locus_tag="VIQ50_04370"
     CDS             complement(<1..983)
                     /locus_tag="VIQ50_04370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018321605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEY9359646.1"
                     /translation="MEFTRRSLTAATGATAATTFTRTALGGWEPSERYPDPAIQILDP
                     SFAKYRIAQTSVERLATGMRWCEGPVYFGDARCLLWSDIPNNSIMRWDEGTGRVSIYR
                     RPSNNANGNTRDRQGRLVTCEHDTRRVTRTEYDGSVTVLIDKFDGKPLNSPNDIVVKS
                     DDSIWFTDPPFGILGNYEGHVATPELPTNVYRLDPKAGRATVVAGDINRPNGLAFSPD
                     EKKLYIVEAGVTPRVIRVYDVNDDKLANGRAFITAEPGGTPDGFRCDVEGNLWCGWGM
                     GSAQQDGVKIFDSNGKPIGFIALPERSANVCFGGAKRNRLFVAGSKSIYSV"
     gene            complement(1032..2126)
                     /gene="mutY"
                     /locus_tag="VIQ50_04375"
     CDS             complement(1032..2126)
                     /gene="mutY"
                     /locus_tag="VIQ50_04375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HEY9359647.1"
                     /translation="MTLAVGTQRRKRASHRVEARSADLLAWYDRHRRVLPWRAAAGER
                     PDPYRVWLSEIMLQQTTIKAVVPYFARFTARWPNVHALAAASLDDVLKLWAGLGYYAR
                     ARNLHACAKTVVERHGGCFPQNEAALAALPGVGPYTAAAIAAIAFDAPAAAVDGNVER
                     VVARLLAIEEELPAAKAEVRRLTRALLPAERAGDFAQALMDLGATICTPKAPACALCP
                     WLRACAARRRGDPQTFPVKAPKKQGQLRRGAAFVLLRGDGFVLLRTRPPTGLLGGMSE
                     VPTTRWTPEFDGGTELAPRLGGTQPKWRRIAGVVTHVFTHFPLELVVYTAEVEPRAAP
                     PDGARWVALAELADEALPNVMRKVLAHALG"
     gene            2156..>2527
                     /locus_tag="VIQ50_04380"
     CDS             2156..>2527
                     /locus_tag="VIQ50_04380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DciA family protein"
                     /protein_id="HEY9359648.1"
                     /translation="MNKPGKSFPRPLADVLQRTLNAAFAKQGFVSTELVTRWGEIVGA
                     EIAEHSEPDKIQWPRPADGETPEPGILVLRVEGPTAVEIQHLSGVVLERVNRFFGWQA
                     VGGLRLRQAPLHRREQAPQPAG"
BASE COUNT          414 a          834 c          860 g          419 t
ORIGIN      
        1 tagacggagt agatcgactt gctgcccgcc acgaacagcc ggttgcgctt ggcgccgccg
       61 aagcagacat tggccgagcg ctcgggtaat gcgatgaatc cgatcggctt gccgttagag
      121 tcgaaaatct tcaccccgtc ctgttgcgcg ctgcccatcc cccagccgca ccacagattg
      181 ccctcgacgt cgcagcggaa gccgtcgggc gtgcctcctg gctcggcggt gatgaaggcg
      241 cgcccgttcg ccagcttgtc atcgttgacg tcgtaaacgc ggatcacccg cggcgtgacg
      301 cccgcctcga caatgtagag cttcttctcg tcgggcgaga acgcaagccc gttcggccga
      361 ttgatgtcgc cggccaccac cgtcgcgcgg cccgctttcg gatcgagccg atagacgttg
      421 gtcggcagct cgggcgtggc cacgtgaccc tcgtaattgc cgagaatccc gaacggcgga
      481 tcggtgaacc agatcgaatc gtcggatttg accacgatgt cgttcggcga gttgagcggc
      541 ttgccgtcga acttgtcgat caacacggta acgctgccat cgtactcggt gcgcgtcacg
      601 cgccgcgtat cgtgctcgca ggtgacgagg cggccctgcc ggtcacgggt gttgccgttg
      661 gcattgttcg acggccggcg ataaatgctg acgcgtccgg tgccctcgtc ccagcgcata
      721 atgctgttgt tgggaatatc gctccacagc aggcagcgcg catcgccgaa atagaccggt
      781 ccctcgcacc agcgcatacc ggtggcgagg cgctcgacgc tggtctgcgc gatgcgatac
      841 ttggcaaagc tcggatcgag aatctggatc gccgggtccg gatagcgctc gctcggctcc
      901 caaccgccga gcgcggtacg ggtgaaggtc gttgcggcgg tcgcgccagt agcggcagtg
      961 agactgcgtc gcgtgaattc catgacaggc cctcccgtgc tggacgacga tctctgcgga
     1021 tcgtgtcagc gctatcctag cgcatgcgcc agcactttgc gcatgacatt gggcagcgcc
     1081 tcgtcggcaa gctccgcaag cgcgacccag cgcgcgccat ccggcggcgc cgcgcgcggc
     1141 tcaacctcgg cggtatagac gacgagctcc agcgggaaat gcgtgaacac gtgggtgacg
     1201 acgccggcga tgcgccgcca tttcggctgc gtgccgccaa gccgcggggc caattcggtg
     1261 ccgccatcga attcaggcgt ccatctggtt gtcgggacct cgctcatgcc gccgagcaat
     1321 cccgtcggcg gacgcgtgcg caggagcacg aagccgtcgc cgcgcaggag gacgaacgcc
     1381 gctccgcgac gcagctgtcc ttgctttttc ggcgccttga ccggaaaggt ttggggatcg
     1441 ccgcgacggc gagcggcgca cgcgcgcagc cagggacaga gcgcgcaggc cggcgctttc
     1501 ggcgtgcaga tcgtggcccc gagatccatc agcgcttgcg caaagtcgcc ggcgcgctcg
     1561 gccgggagaa gggctcgggt gagccggcga acctcggcct tggctgcagg caattcctcc
     1621 tcaatggcta agagccgcgc caccacccgc tccacgttgc cgtcaaccgc cgctgccggc
     1681 gcatcgaagg caatcgcggc gattgccgcc gcggtgtagg gaccgacgcc gggcagcgcg
     1741 gccagcgctg cttcgttttg cgggaagcat ccgccgtgcc gctcgaccac ggtcttggcg
     1801 caagcgtgca aattgcgcgc gcgtgcgtaa tagccgaggc cggcccacag tttgagcacg
     1861 tcatcgagcg atgccgctgc gagtgcgtgc acgttcggcc agcgcgcagt gaaccgcgcg
     1921 aagtatggca cgaccgcctt gatggtcgtc tgctgcagca tgatttcgga gagccacacg
     1981 cgatagggat cgggccgctc gcccgccgcg gcgcgccagg gaagcacgcg gcgatggcgg
     2041 tcgtaccagg ccaggagatc agcgctgcgc gcctccacgc gatgtgacgc gcgctttcgc
     2101 cgctgcgttc caactgctag cgtcatggcc gcgcgatgtg gcagagcctt gcggcatgaa
     2161 caagcccggc aaatccttcc cgagaccatt ggcggacgtc ctgcaacgaa cgctcaatgc
     2221 ggcgttcgcc aagcaggggt tcgtctcgac cgagctcgtg acgcgctggg gcgagatcgt
     2281 cggcgcggag atcgccgagc attctgagcc ggataaaatc caatggccgc ggcccgcgga
     2341 cggagaaacc ccggagccgg ggattcttgt gctgcgggtc gaggggccga cggctgtgga
     2401 gatccagcac ctctcgggcg tcgttctcga gcgggtgaac cgcttcttcg gctggcaggc
     2461 ggtcggggga ctgcggctgc ggcaagcgcc gcttcaccgt cgcgagcaag cgccgcagcc
     2521 cgccggc
//
LOCUS       DATCWM010000225         2003 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_385306, whole genome shotgun sequence.
ACCESSION   DATCWM010000225 DATCWM010000000
VERSION     DATCWM010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2003
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_385306"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..555
                     /locus_tag="VIQ50_04385"
     CDS             <1..555
                     /locus_tag="VIQ50_04385"
                     /inference="COORDINATES: protein motif:HMM:NF013899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreD"
                     /protein_id="HEY9359649.1"
                     /translation="DYRTLEAAASIDVKLRLGANSSLAWLPQETILFDRARLERAIEV
                     DLADDARLLMAEAIVFGRVGMGEAVNEAFLFDRWRLRRGGQLVHAEATRLDGAVARKL
                     AQPAVANGGIAVATVLVMPGDETTIAGVRALGRDLRGEVGASAWNGLALVRLCATDGE
                     ALRHDLLAVLAAVRGAPLPRLWLN"
     gene            568..870
                     /locus_tag="VIQ50_04390"
     CDS             568..870
                     /locus_tag="VIQ50_04390"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008121015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009039 - urease activity [Evidence IEA];
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0043419 - urea catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit gamma"
                     /protein_id="HEY9359650.1"
                     /translation="MNLTPREKDKLLISMAAVVARRRRERGVKLNHPEAVALITDFIV
                     EGARDGKSVAELMEAAAHVLTRSEVMDGIAEMIHDIQVEATFPDGTKLVTVHEPIR"
     gene            891..1196
                     /locus_tag="VIQ50_04395"
     CDS             891..1196
                     /locus_tag="VIQ50_04395"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014498213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0035550 - urease complex [Evidence IEA];
                     GO_process: GO:0043419 - urea catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit beta"
                     /protein_id="HEY9359651.1"
                     /translation="MIPGEMFIKAGEIELNAGRRTLTLSVTNTGDRPIQVGSHYHFFE
                     TNPALKFDRKKARGMRLDIPAGTAVRFEPGQTREVALVALAGKRTVYGFRQDVMGKL"
     gene            1211..1336
                     /locus_tag="VIQ50_04400"
     CDS             1211..1336
                     /locus_tag="VIQ50_04400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359652.1"
                     /translation="MSQAANKLVEVGVVLQGGGALGAYENRWRVPDAPQPMPARS"
     gene            1343..>2003
                     /locus_tag="VIQ50_04405"
     CDS             1343..>2003
                     /locus_tag="VIQ50_04405"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit alpha"
                     /protein_id="HEY9359653.1"
                     /translation="MSAKIERAVYAEMFGPTSGDRVRLADTDIIIEVEKDFCTYGEEV
                     KFGGGKVIRDGMGQSQIANKQGAVDTVITNALILDHWGIVKADVGLKDGRIAAIGKAG
                     NPDIQPNVNIIIGPGTEAIAGEGKILTAGAFDTHIHFICPQQVEEALMSGVTSMLGGG
                     TGPAHGTFATTCTPGPWHIGRMIQAADGLPVNLGFAGKGNASRPAALVEMIKGGACAL
                     KL"
BASE COUNT          359 a          633 c          692 g          319 t
ORIGIN      
        1 gactatcgca cgcttgaagc cgccgcgagc atcgacgtga agcttcgcct cggcgccaac
       61 tcgtcgctcg cctggttgcc gcaggagacg atcttgttcg atcgcgcgcg gctcgagcgc
      121 gcaatcgagg tcgatcttgc cgacgatgcg cggctgctga tggcggaggc tatcgtcttc
      181 ggacgcgtcg gcatggggga agcggtcaac gaggccttcc tgttcgatcg ctggcggttg
      241 cgtcgcggcg ggcagctcgt ccatgccgag gctacgcggc tcgacggcgc cgtcgcgaga
      301 aagctcgcgc agcccgcggt tgccaacggc ggcattgcgg tcgcaaccgt gttggttatg
      361 cccggtgacg aaacgactat cgccggcgta cgcgcgctcg gcagggacct gcgcggcgag
      421 gttggcgcct ccgcctggaa cgggctggcg ctcgtgcggc tgtgcgcaac ggacggggag
      481 gcgctgcgac acgatctcct cgccgtgctc gccgccgttc gcggcgcgcc gttgccccgg
      541 ctgtggttga actgagagtg gcacacaatg aacctcaccc cgcgcgaaaa agacaagctg
      601 ctcatttcca tggccgcggt ggtggcgcgg cgccggcgag agcgcggcgt gaagctcaat
      661 catccggagg cggtggcgct catcaccgac ttcattgtcg agggcgcgcg cgacggaaaa
      721 agcgtcgccg agttgatgga ggcggctgca cacgtgctca cgcgcagcga ggtgatggac
      781 ggcattgccg agatgattca cgacatccag gtagaggcga cgtttccaga tgggaccaag
      841 ctggtgacgg tgcacgagcc gatacgatga tcctggcgag ggctggcgcg atgatcccag
      901 gtgaaatgtt catcaaggcc ggcgagatcg agctcaacgc cggccgcagg acgctgacgc
      961 tgtcggtcac caataccggc gatcggccga tccaggtcgg ctcgcattat catttcttcg
     1021 agaccaatcc ggcgttgaaa ttcgatcgca agaaggcgcg cggcatgcgg ctcgacatcc
     1081 ccgccggcac cgccgtgcgc ttcgagccgg ggcaaacgcg cgaggttgcg ctcgttgcgc
     1141 tcgccggcaa gcgcacggtc tacggctttc gtcaggacgt gatgggaaag ctctgatccg
     1201 agggggcgac atgtcccagg cggcgaacaa gctggtcgaa gtcggcgtgg tcctgcaggg
     1261 cggcggggcg ctgggagcct acgagaatcg ctggcgtgtg cccgacgcgc cgcagccgat
     1321 gccggcaagg agttgaaagc gcatgtccgc caagatcgag cgcgccgtct acgccgagat
     1381 gttcggcccc accagcggtg accgcgtgcg cctcgccgat accgacatca tcatcgaggt
     1441 ggagaaggat ttctgcacct acggcgagga ggtgaaattc ggcggcggca aagtgattcg
     1501 cgacggcatg ggccagagtc aaatcgccaa caaacaagga gcggttgata ccgtcatcac
     1561 caacgcgctg atcctcgacc actggggaat cgtcaaggcg gacgtcggct tgaaagacgg
     1621 ccggatcgcg gcgatcggca aagccggcaa tcccgacatt cagcccaacg tcaacatcat
     1681 cattggtccc gggaccgagg ccatcgccgg cgaaggcaag atcctcactg ccggcgcctt
     1741 cgacacccac atccacttca tctgcccgca gcaggtggag gaggcgctca tgtcgggcgt
     1801 cacctccatg ctcggcggcg gcaccgggcc ggcgcacggc accttcgcca ccacgtgcac
     1861 gccggggcca tggcatatcg ggcgcatgat ccaggccgcc gatggcttgc cggtcaatct
     1921 cggcttcgcc ggcaagggca acgcctcgcg cccggcggcg ctggtggaga tgatcaaggg
     1981 cggcgcctgt gcgctcaagc tgc
//
LOCUS       DATCWM010000226         2039 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_396072, whole genome shotgun sequence.
ACCESSION   DATCWM010000226 DATCWM010000000
VERSION     DATCWM010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2039
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_396072"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1435)
                     /locus_tag="VIQ50_04410"
     CDS             complement(<1..1435)
                     /locus_tag="VIQ50_04410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEY9359654.1"
                     /translation="MTSAKAKLAPAAETPAAHPSLRALERPANLTGTNAPAFGSDVVA
                     DTLRALEIPYIALNPGASYRGLHDSIVNFLGNETPQMLLCLHEESAVAIAHGYAKVTG
                     MAMAAAVHSNVGLFHATMAIFNAWCDRQPVIVLGATGPVDAVKRRPWIDWIHTARDQG
                     AIVRNYTKWDDQPASPAAARESLLRAAWIAGTAPCGPVYINLDAEMQEAKLAEPLAPI
                     DAARFMPHADPTASADLIADAAAMLKGAKHPVILMGRVSRSLDAWNARVALAEALDAK
                     VISDLKIACGFPTDHPLHAGAPASNALVPEAIAAIKAADVILSLDWVDLGGALRNALG
                     GEAPKAKIICISADFHVHNGWSMDYEILPPVDLMLPTAPDAAVPQLLAALGGSKSRKP
                     AAVPAKAESYEPSNAPIRVDDLARSLRAAVGEREVTLTHLPLSWNGATWPFRHPLDYI
                     GSEGGGGVGGGPGISVGAALALKGSGQL"
     gene            complement(1480..>2039)
                     /locus_tag="VIQ50_04415"
     CDS             complement(1480..>2039)
                     /locus_tag="VIQ50_04415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HEY9359655.1"
                     /translation="DDGLAGTAQYLVKRGKYRAGEHWGYEVRGAGHTSGQGASRTYDA
                     WQRAGVTRADRKAFPQLGASARLWVPVPGGPAFLLGPNFYAVRSYNPSMNYTLSIVHL
                     GDRIMGAGPFVQPFPGGERTPTLAEVQEIQQRLTALGFDTGGTDGRVGNDTMIAVRNF
                     QRKVGMQPADGYAGVKLLTRLRQGL"
BASE COUNT          320 a          654 c          721 g          344 t
ORIGIN      
        1 gcagctggcc cgagcccttg agcgccagtg cggcgccgac ggaaatgccc gggccgcctc
       61 cgaccccgcc gccgccctcg gagccgatgt aatcgagcgg atgacggaag ggccaagtgg
      121 ccccgttcca ggagagcggc agatgcgtga gcgtcacctc gcgctcgccg accgcggctc
      181 gaagcgagcg ggcgaggtca tcgacccgga tcggtgcgtt tgacggttca tagctttcgg
      241 cctttgccgg caccgccgcc ggcttgcgcg acttgctgcc gccgagcgcg gcaaggagtt
      301 gcggcaccgc tgcatcgggg gccgtgggca gcatgagatc gaccggcggc aggatttcgt
      361 aatccatgct ccagccgttg tgcacgtgga agtcggcgct gatgcagatg atcttcgctt
      421 tgggcgcctc gccgccgagc gcgttgcgca acgcgccgcc gaggtcgacc cagtcgagtg
      481 agaggatcac atccgccgct ttgatcgccg cgatcgcctc gggcaccaat gcgttggaag
      541 cgggggcgcc ggcgtgcaac gggtgatcgg ttggaaaacc gcaggcgatc ttgaggtcgc
      601 tgatcacctt ggcatcgagc gcctctgcga gcgccacccg tgcattccac gcatcgaggc
      661 tgcgcgatac ccgccccatg aggatgacgg gatgttttgc tcccttgagc atggccgccg
      721 cgtcggcgat gagatcggcg gaagccgtcg gatcggcatg cggcatgaag cgcgccgcat
      781 cgatcggcgc gagcggctcg gcgagctttg cttcctgcat ctcggcgtcg aggttgatgt
      841 agaccggccc gcacggcgca gtcccggcga tccaggcggc gcgcaggagc gactcgcggg
      901 cggccgcggg ggaggcgggc tggtcgtccc atttcgtgta gttgcggacg attgcgccct
      961 ggtcgcgcgc agtgtgtatc cagtcgatcc acggccggcg tttgaccgcg tccaccgggc
     1021 cggtcgcacc gagcacgatg accggctggc ggtcgcacca agcgttgaag atcgccatgg
     1081 tggcgtgaaa gagcccgacg ttggaatgca cggccgcggc catcgccatg ccggtcacct
     1141 tggcgtagcc atgggcgatc gcgaccgcgc tctcctcgtg cagacagagc agcatctgcg
     1201 gcgtctcgtt gccgaggaaa ttcacaatgg agtcgtgcag cccgcgatag ctcgcgccgg
     1261 gattgagcgc gatgtagggg atttccagcg cgcgcaatgt atcggcgacc acgtcgctgc
     1321 cgaaagccgg cgcattcgtg cctgttagat tggccgggcg ctcgagcgcc cgcagcgagg
     1381 gatgggccgc cggcgtttca gcggccggcg ccagtttggc ttttgcactc gtcacgggat
     1441 gttcctcggg ttttccgaaa ggaagcccat agaaccggat cagaggccct ggcgcaaccg
     1501 cgtcagaagt ttcacgccgg catagccgtc ggctggctgc atgccgactt tgcgttggaa
     1561 attgcgcacg gcaatcatgg tgtcattgcc gacgcgcccg tcggtgccgc cggtatcgaa
     1621 gccgagcgcg gtcagacgct gctggatctc ctggacttcg gccaaggtcg gggtgcgctc
     1681 gccgccgggg aagggctgca cgaacggtcc agctcccatg atgcggtcgc ccagatggac
     1741 gatcgacagc gtgtagttca tcgacggatt ataggagcga acggcgtaaa agttcgggcc
     1801 gagcaggaat gccgggcctc ccggcaccgg gacccaaagt cgtgcagacg caccaagctg
     1861 cgggaacgcc ttgcggtcgg cgcgcgtgac gccggcgcgc tgccacgcat cgtaggtgcg
     1921 cgatgcccct tggccgctgg tgtggcccgc gccgcgcact tcgtagcccc agtgctcgcc
     1981 ggcgcgatac ttgccgcgct tgacgagata ttgcgccgtt ccggcaagcc cgtcgtcgg
//
LOCUS       DATCWM010000227         2867 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_120736, whole genome shotgun sequence.
ACCESSION   DATCWM010000227 DATCWM010000000
VERSION     DATCWM010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2867)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2867)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2867
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120736"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..336
                     /locus_tag="VIQ50_04420"
     CDS             <1..336
                     /locus_tag="VIQ50_04420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-3B synthase"
                     /protein_id="HEY9359656.1"
                     /translation="FVVDARDQRRRIVACPGAPSCASGLIEARRLAARLAEHLPPSRD
                     GIAVHVSGCAKACAHPGAAPLTIVGTGQGCGIVRNGSARATPQRYVDPADLIAQVRYA
                     QQPRETVDA"
     gene            329..961
                     /locus_tag="VIQ50_04425"
     CDS             329..961
                     /locus_tag="VIQ50_04425"
                     /EC_number="5.4.99.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020052875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016993 - precorrin-8X methylmutase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-8X methylmutase"
                     /protein_id="HEY9359657.1"
                     /translation="MLKQDYLRNGAAIYERSFAIIRAEADLSRFTPEEAEVAVRMIHA
                     AGQVEVAGLIEFAPEFVSAARKALRGGAPILCDSEMVAHGVTRARLPAKSEVICTLRD
                     PRVPDLAAKLGTTRSAAALELWRDKLAGAVIAIGNAPTALFRLLEVLEAGAAKPAAII
                     GIPVGFVGAAESKEALAANVSGVPYLIVRGRIGGSAMTAAAVNALAKEGI"
     gene            958..1686
                     /locus_tag="VIQ50_04430"
     CDS             958..1686
                     /locus_tag="VIQ50_04430"
                     /EC_number="2.1.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016736787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030788 - precorrin-2
                     C20-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-2 C(20)-methyltransferase"
                     /protein_id="HEY9359658.1"
                     /translation="MTMGRLIGVGVGPGDPGLLTLNAIAALNAADVIAHFAKAGNASN
                     ARTIAAKHLKPGVEELSLLYPLTTEISKEDAAYRETLREFYDSAAAQIAGHLDQDRTV
                     AVIAEGDPLFYGSYMHLHVRLAPRYPTEVVAGVTGMSGCWSAIGEPIAQGDDVFTVLP
                     GTLPEYELERRLADADAAVVMKIGRHLAKVRRALDRAGRLERAIYVERGTMTNAAVMP
                     LVDKLDTYAPYFAIVLVPGWEARP"
     gene            1683..2447
                     /locus_tag="VIQ50_04435"
     CDS             1683..2447
                     /locus_tag="VIQ50_04435"
                     /EC_number="2.1.1.131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007628170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-3B C(17)-methyltransferase"
                     /protein_id="HEY9359659.1"
                     /translation="MSRKLSIVGLGPGDDRYLTREALDALAKAEALYGYGPYLDRVPL
                     RKGQSRHASDNREEAARARAALSRAASGANVAIVSGGDPGVFAMAATVCEEIAVGPDS
                     WRALDVAIVPGITAMLAVAARAGAPLGHDFCALSLSDNLKPWELIERRLDAAAGAGFV
                     IALYNPVSRARPLQLSKALARLARHLPAVTPVIFGHAIGRSDESLAVTTLAHARDTLA
                     DMATLIIVGSRETRVIAREGRAPLVYTPRAVEEAIA"
     gene            complement(2411..>2867)
                     /locus_tag="VIQ50_04440"
     CDS             complement(2411..>2867)
                     /locus_tag="VIQ50_04440"
                     /EC_number="1.3.1.106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008836457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016994 - precorrin-6A reductase activity
                     [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="precorrin-6A/cobalt-precorrin-6A reductase"
                     /protein_id="HEY9359660.1"
                     /translation="TKVDGDSWVEVATMDEAVRALGQAPRRVFLALGRKELQPFTAAP
                     QHVYLIRSVDPVDPPLAVPHAIYIAARGLFSEAEDRALLKRHRIDVVVAKNSGGSTTY
                     GKIAAARTLQLPVIMLARPALPEVSSVATVEEALVWLDHAIASSTARGV"
BASE COUNT          460 a         1005 c          918 g          484 t
ORIGIN      
        1 ttcgtggtgg atgcgcgcga tcagcgccgc cgcatcgtcg catgtcccgg cgcgccatcc
       61 tgcgcctcag gcttgatcga ggcgcgacgg cttgcagcgc ggctcgccga gcatttgccg
      121 ccttcccgcg acggcattgc cgtccacgtc tctggctgcg ccaaggcttg cgcccatccc
      181 ggtgccgctc ctctcaccat cgtcggcacg ggccaaggct gcggcatcgt ccgtaacggc
      241 tcagcccgcg ccacgccgca acgctacgtc gatccggctg atctcatcgc ccaagttcgg
      301 tacgcgcaac agccgaggga aaccgtcgat gcttaagcag gactatctcc ggaacggcgc
      361 cgccatctat gagcgctcct tcgcaatcat ccgcgcagag gccgacctct cgcgcttcac
      421 gccggaagaa gccgaggtcg cagtgcgcat gatccacgcc gcaggtcagg tcgaagtcgc
      481 cggcttgatc gaatttgcgc ccgagttcgt gtcagcagcc cgcaaggcgt tgcgcggcgg
      541 cgcaccgatc ctgtgcgact ccgagatggt tgcgcacggc gtcactcgcg cgcggctccc
      601 tgccaagagc gaagtcatct gcacgttgcg cgacccacgc gtcccggatc ttgccgcgaa
      661 actcggcact acgcgctctg ccgccgcgct cgaactgtgg cgcgataagc ttgcgggcgc
      721 tgtgatcgcc atcggcaatg cgccgaccgc gctatttcgc ctgctcgaag tgttggaggc
      781 gggtgccgct aagccggctg cgatcatcgg cattcccgta ggcttcgtcg gcgcagccga
      841 atcgaaagag gcgctcgcgg cgaacgtgtc aggcgtgcct tacctcatcg tgcgtggccg
      901 catcggcggc agcgctatga cggcggccgc agtcaatgca ctcgccaagg agggaatatg
      961 accatggggc gcctcatcgg cgtgggcgta gggcccggcg atccagggct gctcacgctg
     1021 aacgctatcg ctgcgctcaa tgcagccgac gtgatcgccc atttcgccaa ggcaggaaac
     1081 gcgagcaacg cgcgaaccat cgcggcaaag cacctcaaac ctggcgtcga ggaactgtcg
     1141 ttgctctatc cgctgacgac cgagatctcc aaggaggatg cagcctatcg cgaaacgctg
     1201 cgcgagttct acgatagtgc ggctgcacaa atcgccgggc atctcgacca agaccgcaca
     1261 gtcgccgtga tcgccgaggg cgatcccctg ttctacggct cctacatgca tctccatgtg
     1321 cggctcgccc cgcgctatcc gaccgaggtg gtcgccgggg tgaccggcat gtccggctgc
     1381 tggtcggcca tcggcgagcc aattgcgcaa ggcgacgacg tgttcaccgt gctgcccggt
     1441 acgctgcccg agtacgagct cgagcgccgc ctcgccgatg ccgacgccgc ggtggtgatg
     1501 aagatcggcc gccatctcgc caaggtgcga cgcgcgctcg atcgcgccgg ccggctcgaa
     1561 cgcgcgatct acgtcgaacg cggcaccatg accaacgccg ctgtcatgcc tctcgtcgac
     1621 aagctcgata cctatgcgcc ctacttcgcc atcgtgctgg tgccgggctg ggaggcgcgg
     1681 ccatgagccg caagctctca atcgtcgggc tcgggcccgg cgatgaccgc tacctcacgc
     1741 gcgaggcgct cgatgcgctc gctaaagctg aagcgctcta cggctatggg ccttatctcg
     1801 accgcgttcc gttgcggaaa ggccaatcgc ggcatgcttc cgacaatcgc gaggaagcag
     1861 cacgcgcgcg cgccgcgcta agccgcgcgg cgtcaggcgc caatgtagcc atcgtgtcag
     1921 gcggggaccc tggcgtattc gccatggcgg ctacggtgtg cgaggagatt gcggtcggcc
     1981 ccgactcgtg gcgcgcgctc gatgtcgcca tcgttcccgg cattactgcc atgcttgcgg
     2041 tcgctgcccg cgcaggagcg ccgctcgggc acgatttctg cgcgctgtcg ctgtcggaca
     2101 atctcaagcc ttgggagctg atcgagcgtc gcctcgatgc ggccgccggc gccggcttcg
     2161 tcatcgcgct ttacaatcct gtctcccgcg cgcgaccgtt acagctcagc aaggcgctcg
     2221 cgcggcttgc ccgccatctg ccggctgtga cgcccgtcat cttcggtcat gcgattgggc
     2281 gcagcgatga aagcctcgcg gtaaccacgc tcgctcacgc acgcgacacg cttgccgaca
     2341 tggcgacgct catcatcgtg ggatcgcgcg agacgcgcgt catcgcccgc gagggccgtg
     2401 cgccgctcgt ctacacgccg cgtgccgtcg aggaggcgat cgcatgatcg agccagacga
     2461 gcgcctcctc taccgtcgcg acggaggaaa cctctggcag cgccgggcgc gccagcatga
     2521 tcaccggaag ctgaagcgtc cgcgccgcgg cgatcttgcc gtaggtcgtg ctcccgccgc
     2581 tgttcttcgc caccaccaca tcaatgcggt ggcgcttgag cagcgcgcgg tcctcggcct
     2641 cgctaaacag tccgcgcgcg gcgatataga ttgcgtgcgg cacggcgagc ggcgggtcga
     2701 ccggatcgac gctgcggatg agatagacgt gctgcggcgc tgccgtgaaa ggctgaagct
     2761 ctttccggcc aagcgcgagg aacacgcggc gcggcgcctg cccgagcgcg cgcaccgcct
     2821 catccatcgt cgcaacctcg acccagctat cgccatcgac cttggtc
//
LOCUS       DATCWM010000228         2463 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_185566, whole genome shotgun sequence.
ACCESSION   DATCWM010000228 DATCWM010000000
VERSION     DATCWM010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2463)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2463)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2463
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185566"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..464)
                     /locus_tag="VIQ50_04445"
     CDS             complement(<1..464)
                     /locus_tag="VIQ50_04445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010686905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9359661.1"
                     /translation="MDAYADRREGEALTHRQTLLIVLGVLLPTFMGALDTTILATALP
                     TIGRAFGDVHNLPWLITAYLLASTATIPLYGKIADIHGRRFTLRIAIMTYMAGSLVCA
                     LAPNMPVLILGRVLHGLGGGGLSSMGMIVLGDLVSPKERGRYYGYFAATYTTA"
     gene            810..>2463
                     /locus_tag="VIQ50_04450"
     CDS             810..>2463
                     /locus_tag="VIQ50_04450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008872539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indolepyruvate ferredoxin oxidoreductase family
                     protein"
                     /protein_id="HEY9359662.1"
                     /translation="MPFNQVTLDDKYDLTRSRIFVTGFQAIVRLCLMQKERDRRARLN
                     TAGYVTGYRGSPLGTLDQQFIRAQRSLDKYDIRFQAGLNEDMAATAIWGSQQAELRGE
                     GKFDGVFGLWYGKGPGVDRTGDVFRHANFAGTSKHGGVLALMGDDHTAESSTTAHQSE
                     YHFIDVMIPILNPAGVQEILDYGLYGWAMSRFCGTWVALKSMHETVESTAVIDGSMER
                     VNIVIPDDFAMPEGGLNIRLRDTILGQEARLHDYKRDAMLAFVRANKLNKYITSGGRQ
                     PKIGIITVGKSYLDVRQALDELGIDEVRCNDLGIRLYKIGCPWPISQQDLKQFSDGLE
                     LIIVVEEKRSLIEVQVREELYGTANQPVCIGKKDEQRNWLFPVKGALDPNEIAICIGD
                     RILQTVGRNEEIAARVAALKDAQRILAETQDVAVRIPYFCSGCPHNSSTVVPEGMRAY
                     AGIGCHYMAQWMDRSTLGYTQMGGEGANWIGEAPFSKRPHVFQNLGDGTYNHSGYLAI
                     RAAIAAGVNITYKILFNDAVAMTGGQPNEGGLTVPQIARQVAA"
BASE COUNT          456 a          803 c          784 g          420 t
ORIGIN      
        1 gcggtggtgt aggtcgccgc gaagtagccg tagtagcggc cgcgctcctt gggtgagacg
       61 aggtcgccga gcacgatcat gcccatggat gaaaggccgc ccccgcccag cccgtgcaac
      121 acgcgcccga gaatcagcac cggcatgttg ggcgccagcg cgcagaccag cgagcccgcc
      181 atgtaggtca taatggcgat gcgcagcgtg aagcggcggc catggatatc ggcgatcttg
      241 ccgtagagcg ggatggttgc cgtcgatgcg agcagatatg ccgtgatcag ccacggcagg
      301 ttgtgcacat cgccgaaggc gcgtccgatc gtgggcagcg cggtcgcgag aatggtcgtg
      361 tcgagcgcgc ccatgaacgt cggcagcagc acgccgagga cgatcagcag cgtctgtcga
      421 tgcgtgaggg cctcgccctc acggcggtcg gcgtaggcat ccatcggcag tggtgttccg
      481 gcccgggttg gcgcgatcgg ccctccgcgc ggtcacgctc ggggcgtgtt ctagggcacc
      541 tccggtggtt gggccagcgg ggcccgcgaa tcttcgcgcg gcgccgctct cgaggccagg
      601 tccggatgca tgtgctgcaa tgcgccaaaa tacgcgtccg ggggcggcgc cgatattttc
      661 ttgcgggcgc gcggtccatt gcgaaattgc cagtcggctc gccgacttgg cattgctgcc
      721 atggcgccac gactatatct ctccaccgag tccaaagtcc ctagcgcttg ctttgtcgcg
      781 agggcacact gcccttggag gcccgcgtga tgccgttcaa ccaagtcacg ctcgacgaca
      841 aatacgacct gaccaggagc cggatttttg tgaccggctt ccaggccatc gtgcgccttt
      901 gcctgatgca gaaggagcgc gatcgccgcg cccgcctcaa taccgcgggc tacgtcaccg
      961 gctatcgcgg ctccccgctc ggcaccctcg atcagcagtt catccgcgcg cagcgctcgc
     1021 tcgacaaata cgacatccgc tttcaggctg gcctcaacga ggacatggcc gcgaccgcga
     1081 tctggggctc gcagcaggcg gaactgcgcg gggagggcaa gttcgacggc gtgttcggcc
     1141 tctggtacgg caaggggccc ggcgtcgacc gcaccggcga cgtcttccga cacgccaatt
     1201 tcgccggcac ctcaaagcat ggcggcgtgc tggcgctgat gggcgatgac cacaccgccg
     1261 aatcctccac caccgcgcac cagtccgaat atcacttcat cgacgtcatg atcccgatac
     1321 tgaatcccgc cggcgttcag gaaattctcg attacgggct ctatggctgg gcgatgtcgc
     1381 gcttctgcgg tacctgggtc gcgctcaaat cgatgcacga gaccgtggaa tcgaccgcgg
     1441 tcatcgacgg cagcatggag cgggtcaata tcgtcattcc cgacgacttc gccatgcccg
     1501 agggcggcct caatatccgc ctgcgcgaca cgatcctcgg ccaggaggcg cggctgcacg
     1561 actacaaacg cgacgccatg ctcgccttcg tgcgcgcgaa caagctcaac aaatacatca
     1621 cctccggcgg gcgacagccc aaaatcggca tcatcaccgt cggcaagagc tatctcgacg
     1681 tgcgtcaagc gctcgacgag ctcggcatcg acgaagtccg gtgcaacgac ctcggcatcc
     1741 ggctgtataa aatcggatgt ccctggccga tcagccagca agacctcaag cagttctccg
     1801 acggtctcga gctcatcatc gtggtcgagg agaagcgctc actgatcgag gtgcaggtgc
     1861 gcgaggagct ctacggcacc gcgaaccagc ctgtctgcat cggcaagaag gacgagcagc
     1921 gtaactggct attcccggtc aagggcgcgc tcgatcccaa cgagatcgcg atctgcatcg
     1981 gcgaccgcat tctgcagacg gtgggtcgca acgaggagat cgcggcgcgc gttgcggcct
     2041 tgaaggacgc gcaacggatt ctggccgaga cgcaggacgt cgcggtgcgc attccttatt
     2101 tctgctccgg ctgtccgcac aattcatcga ccgtggtgcc ggagggcatg cgcgcctatg
     2161 ccgggatcgg ttgccattac atggcgcagt ggatggaccg ctcgaccctg ggctacacgc
     2221 agatgggcgg ggagggcgca aactggatcg gcgaggcgcc gttctcaaag cgtccccatg
     2281 tctttcagaa cctcggtgac ggcacctaca accattccgg ctacttggcc atccgcgccg
     2341 ccatcgccgc aggcgtgaac atcacttaca aaatcctgtt caacgacgca gtcgccatga
     2401 ccggcggtca gcccaacgag ggcggtctca cggtgccgca aattgcccgc caagtggcgg
     2461 ccg
//
LOCUS       DATCWM010000229         3213 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_271916, whole genome shotgun sequence.
ACCESSION   DATCWM010000229 DATCWM010000000
VERSION     DATCWM010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3213
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_271916"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..420)
                     /locus_tag="VIQ50_04455"
     CDS             complement(<1..420)
                     /locus_tag="VIQ50_04455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018409681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional folylpolyglutamate
                     synthase/dihydrofolate synthase"
                     /protein_id="HEY9359663.1"
                     /translation="MTAIDSIVARLTALHPKRIDLSLDRMWRILMALGDPQRRMPPTI
                     HVAGTNGKGSTMAFMRAILEAAGLRVHVYTSPHLVRFNERFRLGATGEGCLVSDEELG
                     DALGECERVNADAPITVFEITTAAGFLLFARHPADVLL"
     gene            complement(533..1378)
                     /gene="accD"
                     /locus_tag="VIQ50_04460"
                     /pseudo
     CDS             complement(533..1378)
                     /gene="accD"
                     /locus_tag="VIQ50_04460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012493901.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
     gene            complement(1467..2060)
                     /locus_tag="VIQ50_04465"
     CDS             complement(1467..2060)
                     /locus_tag="VIQ50_04465"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEY9359664.1"
                     /translation="MTGQSFALFDTPIGQCGIAWGSRGICGVQLPEASEARTHARLMR
                     RYPHARQGSPPPQVRHAIEAIAALLAGEPRDLSTVALDMDGVPEFDRRVYKAARSIAA
                     GNTLSYGELAARLGERDLARDVGQALGRNPFPIIVPCHRVLAAGGRSGGFSANGGVAT
                     KLRLLTIERARTSDAPTLFDGDDGFGFALKPKARTRS"
     gene            complement(2114..2953)
                     /gene="trpA"
                     /locus_tag="VIQ50_04470"
     CDS             complement(2114..2953)
                     /gene="trpA"
                     /locus_tag="VIQ50_04470"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HEY9359665.1"
                     /translation="MTTRIDRRFAELKAQGRAALVTFLTAGDPDPETSLAILRAIPAA
                     GADVVELGMPFTDPMADGPAIQMSSQRALKAGQTMTKTLEIVRAFRQAHEATPLVLMG
                     YYNPIYIYGVDRFLRDAKSAGVDGLIVVDLPPEEDAELCLPALKAGLNFIRLATPTTD
                     DRRLPAVLANTSGFVYYVSITGITGTAAPDPTKASAAVARIKRHTALPVAVGFGVRTA
                     EQAAVIAAGADGVVVGSALVNALKGSLDADDRASAKTVTAVVNLVAELARGVRGARGA
                     AAE"
     gene            complement(2974..>3213)
                     /locus_tag="VIQ50_04475"
     CDS             complement(2974..>3213)
                     /locus_tag="VIQ50_04475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359666.1"
                     /translation="LRRRERRVISRQKIVGWILIVASVAYITYFLRVRLFTPGPILEN
                     KEWVQLIGSIVVLMLGTINVRMAAMRQRGGKESPD"
BASE COUNT          564 a         1044 c         1043 g          562 t
ORIGIN      
        1 cagcagcacg tccgcgggat ggcgcgcgaa aagcaagaat ccagccgccg tcgtgatttc
       61 gaacacggtg ataggtgcgt ccgcattgac gcgctcgcat tcgccgagtg cgtcgccgag
      121 ctcctcgtcg gaaacgaggc agccttcacc cgtcgctccc agccgaaagc gctcgttgaa
      181 gcgcacgaga tgcggggagg tataaacgtg cacgcgcagc cccgcagcct ccaggatcgc
      241 gcgcatgaaa gccatggtgg atcccttgcc gttggtgccg gcgacatgga tggtcggcgg
      301 catccgccgc tgcggatcgc cgagcgccat cagaatgcgc cacatccgat cgagcgacag
      361 atcaatgcgc ttcggatgca acgccgtgag ccgcgcaacg atggagtcga tggcagtcat
      421 gcaggcaagc tctcgaaacg gcgcgtggcg ctatgccggc cgtgcgaaat ccgacgatgg
      481 atgcttatcc cgcgctcgga agcggcaagt tgtccgcagg cggcttcgca cgtgccttgg
      541 tcaagatcct gcagagattt gcaagcgtcg gccgcagatg atgtcgatgc acgaccatgt
      601 cgaccatccc atggtccttg agatactcgg cccgttgaaa gccgtcgggc agcttctcgc
      661 ggatggtctg ctcgatcacc cgcggtccgg caaaacctat gagcgcgccc ggctccgcaa
      721 tatggacgtc gccgagcatg gcgtaggacg cggtgacgcc accggtggtc ggattggtga
      781 gcacgaccat gtaaggccgc cttgcctcac gcagcatctg caccgcaagc gtggtccggg
      841 gcagctgcat cagcgagaag attccttcct gcatgcgcgc gccacccgaa gccgcgaaca
      901 tgatgaacgg cgttcccttg tcgactgcgg tctcgaggcc cttgatgact gcttcgcccg
      961 cggccatgcc gagtgagccg cccatgaagt cgaaatcctg aaccccgatc accaccggca
     1021 ggccttcgag cttgccgaaa ccgagcttga tagcatcgtt ggtgccggtc ttggctcgcg
     1081 catccttcag gcgatcggcg tagcgcaact cgtcgcggaa tttgaggggg tcgagcggca
     1141 cggccgggat tgcgatgtcg aaccaggtct cgttgtcgaa catcgacttg agccgcatca
     1201 tcgcccccat gcgcatgtgg tagttggagc cggggatgac gaactggttc gcctcgacgt
     1261 ctttgtaaaa cacgagctgg ccggtctccg gacatttgat ccagagattc tccggcgttt
     1321 cgcggcgcgc gaagtaattg cggattttcg gccggactac gttggagatc cagttcatga
     1381 cgcggtcctc tcgcccgcat atatggatcg cctgctcaag gctggcaact gcgaagaaaa
     1441 tcctccatgc tcacgcggtt gcgcgctcag cttcgggttc gcgctttcgg cttcagagcg
     1501 aagccgaagc cgtcatcgcc gtcgaacagc gtgggcgcat cgctcgtgcg cgcgcgttcg
     1561 atcgtgagca ggcggagctt ggtcgcaact ccgccattgg cggagaaacc tccggacctg
     1621 ccgccggccg caagcacgcg atgacaggga acaatgatcg gaaacggatt tcgtccgagc
     1681 gcctgcccga catcgcgcgc caagtcgcgc tcgccgagtc gcgccgcgag ctctccgtag
     1741 gagagcgtgt tacccgctgc gatgctgcgc gccgctttgt agacccggcg atcgaactcg
     1801 ggcacgccgt ccatgtcgag cgcgacggtg gaaagatccc tcggctcgcc cgccaggagc
     1861 gcggcgatgg cctcgatcgc atgccgcacc tgtggcggag gcgagccttg ccgcgcatgc
     1921 ggatagcgcc gcatgagacg cgcatgggtt cgcgcctcgc tcgcctccgg caattgcacg
     1981 ccgcagatgc cgcgcgaacc ccacgcgatg ccgcattggc cgataggcgt atcgaagagg
     2041 gcaaagctct gtcccgtcat gatctcgcca tcctagcgtc cgccgccgtc gcgagcatcc
     2101 cggatcttgc gtcctattcc gccgccgctc ctcgtgcccc gcgcacgccg cgggcgagtt
     2161 cggcgacaag gttaaccacg gccgtcacgg ttttcgcgct ggccctatcg tccgcatcga
     2221 ggcttccctt gagcgcgttt accagggccg agccgacgac gacgccgtcg gctcctgcgg
     2281 cgatcaccgc cgcctgctcg gcggtgcgca cgccgaaccc gaccgccacc ggcaaggcgg
     2341 tgtggcgctt gatgcgcgcg accgcggcgg aagcctttgt gggatccggc gcggccgtgc
     2401 cggtgatgcc ggtgatggag acgtagtaga cgaagcccga cgtgtttgcg agcacggccg
     2461 gtaggcgcct gtcgtcggtc gtgggagttg ccaggcggat gaaattcagc ccggccttga
     2521 gcgccgggag gcatagctcg gcatcttcct ccggcggcag gtcgacgacg atcaggccgt
     2581 cgacgccagc ggatttggcg tcacggagaa accggtccac gccgtaaatg taaatcgggt
     2641 tgtagtatcc catgagcacg agcggcgtcg cctcgtgcgc ttggcgaaag gcgcgcacga
     2701 tctcgagcgt tttcgtcatg gtctgcccgg ccttgagagc gcgctgcgac gacatctgga
     2761 tcgccggccc atcggccatg gggtcggtga acggcatgcc gagctcgacc acatcggcgc
     2821 cggcggccgg aatcgcccgc agaatcgcaa gcgaggtctc ggggtcgggg tcgccggccg
     2881 tcaggaacgt caccagggcg gcgcgacctt gcgccttgag ctcggcgaag cggcgatcga
     2941 tgcgcgtcgt catgggttcg actccgacga aactcaatcc ggcgactctt tgcccccacg
     3001 ctggcgcatc gcggccatgc gcacgttaat ggtgcccagc atgagtacca cgatcgagcc
     3061 gatgagctgc acccattcct tgttctccag gatgggcccg ggtgtgaaca accgcacccg
     3121 caggaagtag gtgatatagg cgaccgatgc gacgatcaaa atccagccga cgatcttttg
     3181 cctgctgatc acacgccgct cccgccggcg cag
//
LOCUS       DATCWM010000230         2933 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_412413, whole genome shotgun sequence.
ACCESSION   DATCWM010000230 DATCWM010000000
VERSION     DATCWM010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2933)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2933)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2933
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_412413"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            155..442
                     /locus_tag="VIQ50_04480"
     CDS             155..442
                     /locus_tag="VIQ50_04480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359667.1"
                     /translation="MKALAISMVAGAALCSLMSVPASAMPMSNLAAAASDLALGQSVR
                     YVRHPYRYRLSRGNYNAYGAAYGYRGGYYGYPGYARDCSGYGYGPNSPCYP"
     gene            601..738
                     /locus_tag="VIQ50_04485"
     CDS             601..738
                     /locus_tag="VIQ50_04485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359668.1"
                     /translation="MIGYQQPRIGELPSGVARDEQNTEPELDAIGKTLEQLENKICPG
                     C"
     gene            926..1672
                     /locus_tag="VIQ50_04490"
     CDS             926..1672
                     /locus_tag="VIQ50_04490"
                     /inference="COORDINATES: protein motif:HMM:NF019032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1499 domain-containing protein"
                     /protein_id="HEY9359669.1"
                     /translation="MHLPKIGPIAPLVLAAVALGLLALGPLGLRLDWWAYGFGLYRLM
                     PASALVAAIAVVLSILALAREWSRLHLGGRAMLFIALALAASLVCVPVFYWHTRKTVP
                     PIHDITTDIDNPPAFSAVLPARAAERAGGVDRRTPQLGELQKAAYPDLAPLTTTLPPT
                     RAFEEALEAARSMPGWTIVAADANAGRIEASEQSRWFRFIDDVVIRVVRDGAGSRIDV
                     RSTSRQGRSDYGVNAARIRAYMGALRKRIG"
     gene            2409..>2933
                     /locus_tag="VIQ50_04495"
     CDS             2409..>2933
                     /locus_tag="VIQ50_04495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012041810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HEY9359670.1"
                     /translation="MSIEQAAINLAVAFCLSAVIGFERQWRNRLAGLRTNTLVALGAA
                     SFVVFEAIVPEEASPTRVAAQVVSGIGFLGAGLIFREGMSVRGLNTAATLWCSAAVGV
                     LAGAGYLAYAALATGFIVFVNLLLRPIVNFINRQPLVASEVETGYLIALPCRAEDEAH
                     VRALLLQGLAGSILA"
BASE COUNT          475 a          974 c          955 g          529 t
ORIGIN      
        1 gcctcgccga ggcgcgcttt acgatcagtt gaaagtccca tcatttcttc aacgctttgt
       61 gaccgcccgc tggtcgccgt ccgtgatacc atccaggcca gctcagggtt ggcgggcttg
      121 ttacgggacg ggcactacca atagggagtg tcccatgaaa gctctcgcca tcagtatggt
      181 cgctggcgcc gcgctgtgca gcctcatgtc cgtgccggca tcggcaatgc caatgagcaa
      241 tcttgccgcc gcagcgagcg acctcgcgct aggccaaagc gtgcggtatg tccgccaccc
      301 ttaccggtac cgattgagcc gtggcaacta taacgcctat ggagcagcct acggctatag
      361 aggtggttat tacggctatc cgggctatgc gcgcgactgt tccggctacg gctacgggcc
      421 aaactcccca tgctacccct aaagccgctt cggggccgga aggtcgaagc tacggcaacg
      481 gttcggccgt ctcgtgttct cgccgcgacg ctcgcggccg gggtcctggc cagcgtcgcc
      541 agttgggccg ttgccggcgc agaggaagct cctccgctgg tccggcaaag cgatgacgcg
      601 gtgatcgggt atcagcagcc ccgcatcgga gagttgcctt ccggcgtggc gcgcgacgag
      661 cagaacaccg agccggagct cgacgccatc ggcaaaacgc tcgagcaact cgagaacaaa
      721 atctgccccg ggtgctgaac ggcgcctgcg tggaacgcgc ggttgcggtt gcccggcgcg
      781 agccggccgt ccggggccgc gcctccgtgg gaaaaatgtc cccgtcagcc tttgcgccat
      841 cgcggcgccc atctgtccgc gtaaaatatt caagagtagg atcgcaaccc ttacgaccta
      901 gcacggcatc cgcgccgcct atcgcatgca tttgccgaaa atcggtccca ttgctccctt
      961 ggttttggcg gccgtcgcat tgggcctcct cgccctgggg ccgctcggct tgcggctgga
     1021 ttggtgggca tatggcttcg gcctctatcg gctgatgcct gcttcggcgc tggtcgcggc
     1081 aatcgccgtc gtcctctcta tcctcgcgct cgcgcgcgag tggtcgcggc tgcatctcgg
     1141 cggccgcgcc atgctgttca ttgcgctcgc cttggccgcg tccctcgtct gcgtgccggt
     1201 tttctactgg cacacgcgca agaccgttcc gcccattcac gacatcacca ccgacatcga
     1261 taatccgccg gcgttcagcg ccgtgttgcc ggcgcgcgcc gccgagcgcg cagggggcgt
     1321 cgaccgtcgc acgccgcagc tcggagagct gcagaaggct gcctaccccg acttggcgcc
     1381 gctcacgacc acactgcccc cgacgcgggc gttcgaggag gcgctcgagg ccgcgagatc
     1441 gatgcccggc tggaccatcg tcgccgccga cgccaatgcc ggccgcatcg aggcgagcga
     1501 gcaaagccgt tggttccgct tcatcgacga tgtcgtcatc agggtcgtcc gcgacggagc
     1561 gggaagccgc atcgacgtgc gctccaccag ccggcagggc cgcagtgact acggcgtgaa
     1621 cgcggcacgc atccgcgctt acatgggcgc gttgcgcaaa cgcatcggct gatgcgcgcc
     1681 cgcgccgggg cgaacttgcc gcgaactgtt gccgcagcat gaccaaagct taacttgtgc
     1741 ggccgatcga cgatgacgac atcccgcgag ggccccatcc caacgcggcg gtcgagccga
     1801 tgcaagcttg actcgcttcg acaggaagcg taggggcgca ccgtcgctcc gataaggagc
     1861 ggcaagaaga gtgtgcaacc gtttacgacc aacgaatgga cagtagcccc tttggtgaag
     1921 ccggccgggt gatttcgacc gggtctgcga caccgcaaga catcgatgcc aactgcggcg
     1981 ctgtcggccg cgttagggtg agcgaccgcg aataagcgat cgctttcctt tgcgctcacc
     2041 gggtccgccg cacagcggaa atgaggtgag cgatgttcac aaaactcgca gcactgtcgg
     2101 gcgatcgtcg ccgccgcgcg gcgccggtgg cgccgatcca tagcaacgac aatcggtctg
     2161 gccaccgcct tgccgcggct cctccgcggg cgaggcggcc aatgctcctg tgccgatggc
     2221 ggcttgatcc gagcacaggt aggcttgaat gccggtggca tatcgaatcg ccaggtgaga
     2281 cctcggccga ggaactgcca ccgatgcgca ggaccaggcg acgcgccttg gctggagggc
     2341 gtgcgcttgc acgcggctcc acgccctgcc gcacgacgaa cacagcggaa agatgattgg
     2401 tgacgagcat gtccatcgaa caggcggcga tcaacctcgc ggttgcgttt tgcctcagcg
     2461 cggtcatcgg cttcgagcgt caatggcgta accgccttgc cggtttgcgc acgaacacac
     2521 tggtggcctt gggcgcggcg agcttcgtcg tgtttgaggc catcgtgccg gaggaggcga
     2581 gcccgacccg tgtcgcggcc caggtcgtat cgggcatcgg ctttctcggt gccggcttga
     2641 tctttcgcga gggcatgagc gtgcgcgggc tcaataccgc cgccacgctg tggtgctccg
     2701 cggcggtcgg cgtcctcgcc ggagcgggct atctggccta tgccgcgctc gccaccggat
     2761 tcatcgtgtt tgtcaatctt ctgttgcggc cgatcgtcaa tttcatcaat cggcagccgc
     2821 tggtcgcgag cgaggtcgag accgggtact tgatcgcgtt gccctgccgc gccgaggacg
     2881 aagcgcatgt tcgcgcgctg ctcttgcagg ggctcgccgg cagcatcttg gcg
//
LOCUS       DATCWM010000231         3224 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_493250, whole genome shotgun sequence.
ACCESSION   DATCWM010000231 DATCWM010000000
VERSION     DATCWM010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3224
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_493250"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1190
                     /locus_tag="VIQ50_04500"
     CDS             <1..1190
                     /locus_tag="VIQ50_04500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY9359671.1"
                     /translation="GDIAPGTAVAGFALVAAAILIATANSQLPPAPLPKDEPSAPRVG
                     DPLIEAMLAALPDPVVALDHRGDVVALNARAAAIAPALRPGESVSLGLRVPEVLDAIR
                     QARASGISQRAEFFQRVPLDRWYEAIAAPILGSSFKPGLVLVAFHDLTPLRRVEEMRA
                     DFVANASHELRTPLAALSGFIDTLRGSAREDPVARERFLEIMQAQADRMARLIDDLLS
                     LSRIELNAHLRPDSEVDLGAIVRQVADTLQTLARDRGVEVNTMGISDPLVVLGDRDEL
                     IRVLENLVENALKYAASGKRVEITLSFGEGLDGKPEARVAVRDHGPGIAPEHLPRLTE
                     RFYRVDVSESRAQGGTGLGLALVKHILNRHGGRLTIESVPGQGATFTAHLPMAEAEAR
                     GAA"
     gene            1217..2263
                     /gene="pstS"
                     /locus_tag="VIQ50_04505"
     CDS             1217..2263
                     /gene="pstS"
                     /locus_tag="VIQ50_04505"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018265770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0042301 - phosphate ion binding [Evidence
                     IEA];
                     GO_process: GO:0035435 - phosphate ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HEY9359672.1"
                     /translation="MTSLSTILAGAAVAAAMAPARAADISGAGSTFAYPIYAAWGAAY
                     QKETGVALNYQPIGSSDGITKLQNKEVIFAASDMPLNLVDLDMDGFVQFPTLTAGVVP
                     VVNIDGLKPGELVLDGATLARIFLGEIKAWNDPAIRKLNPSVKLPSRSIAVVYRRDGS
                     GTTFVFTDYLNKVSDKWKTAVGSTTAVEWPVGTGVKGNEGVAASVGGLKGAIGYVEYA
                     YAKQNKLTYARLMNKAGKAVAPSIESFSAAAANANWEGTSGFGVILTNEPGAASWPIA
                     GATFILMYKQPSDPAAAAEALKFFHWAYAKGGKMAQELDYVPMPANVIAAVERLWAGQ
                     MQNAQGRPLFVPPK"
     gene            2605..>3224
                     /gene="pstS"
                     /locus_tag="VIQ50_04510"
     CDS             2605..>3224
                     /gene="pstS"
                     /locus_tag="VIQ50_04510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018316908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0042301 - phosphate ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HEY9359673.1"
                     /translation="MIVAIGLLTTVAAVAATPAVGAEISGAGATFPYPIYAKWAEAYK
                     KATGVAVNYQPVGSGEGIRQIQNKEVTFGASDMPLKPADLEAYGLAQFPTVIGGVVPV
                     VNLEGIKPGELTIDGPTLAKIFLGEIKSWNDAALRRLNPNVKLPSQGIAVVHRSDGSG
                     TTFVFTDYLSKMSSDWRSKVGSITSVDWPIGVGARGNEGVAASVARV"
BASE COUNT          545 a         1066 c         1072 g          541 t
ORIGIN      
        1 tcggcgacat cgccccgggg acggcggtgg ccggcttcgc gctggtggcg gcggcgatcc
       61 tgatcgcgac cgccaactcg cagctgccgc cggcgccgtt gccgaaagac gagccgagcg
      121 cgccgcgcgt aggcgatccg ctgatcgaag cgatgctcgc ggcgctgccg gatccggtgg
      181 tggccctcga ccatcgcggc gacgtcgtcg cgctcaacgc gcgcgctgcg gcgattgcgc
      241 cggcgctgcg tcccggcgag tcggtgtcgc tcgggctgcg cgtgcccgaa gtgttggacg
      301 ccatccgcca ggcgcgcgca agcggcatct cccagcgcgc cgaattcttt cagcgcgtgc
      361 cgctcgaccg ctggtacgaa gccatcgcgg cgccgatcct gggctcgagc ttcaagccgg
      421 gcctcgtgct ggtcgccttc cacgatctca cgccgctgcg ccgcgtcgag gaaatgcgcg
      481 ccgacttcgt cgccaacgcc agccacgagc tgcgcacccc gcttgccgcg ctgtcgggat
      541 tcatcgacac gctgcgcggc tcggcacgcg aggatccggt ggcgcgcgag cgctttctcg
      601 agatcatgca ggcgcaggcc gaccgcatgg cgcgcctcat cgacgatctg ctctcgctct
      661 cgcgcatcga gctcaacgcg catctgcggc cggacagcga ggtcgacctc ggcgccatcg
      721 tgcgccaggt cgccgatacc ttgcagacct tggcgcgcga ccgcggcgtc gaggtcaaca
      781 ccatgggcat ctccgatccg ctggtcgtgc tcggcgaccg cgacgagttg atccgggtgc
      841 tcgagaatct cgtcgagaac gcgctgaaat atgccgcctc gggcaagcgg gtggagatca
      901 cgttgtcctt cggcgaaggg ctcgacggca agccggaggc gcgcgtggcg gtgcgcgatc
      961 atggtcccgg aattgcgccc gagcacttgc cgaggctgac cgagcgcttc tatcgtgtcg
     1021 acgtgtccga gagccgcgcg caaggcggca ccgggctggg gctagcgctg gtcaagcaca
     1081 tcctcaatcg ccacggcgga cggctgacca tcgagagcgt accggggcag ggtgcgacat
     1141 tcaccgcgca tctgcccatg gccgaggccg aggcgagagg agcggcgtga atatgcatca
     1201 ctggcggaag agtgcgttga cgagcttgtc tacgatcctc gccggcgcgg ccgttgctgc
     1261 tgccatggcg ccggcgcgcg ccgccgatat ctccggcgcc ggatcgacct tcgcctatcc
     1321 gatctacgcg gcctggggcg cggcttatca gaaggaaacc ggcgtagcct tgaactatca
     1381 gccgatcggc tcgagcgacg gcatcaccaa gctccagaac aaggaggtga tcttcgcggc
     1441 ctccgacatg ccgttgaacc tcgtcgacct cgacatggat gggttcgtgc agttccccac
     1501 gcttaccgcc ggcgtcgtgc cggtggtcaa tatcgacggc ctcaagcccg gcgagctcgt
     1561 gctcgacggc gcgaccttgg ccagaatctt cctcggcgag atcaaggcgt ggaacgatcc
     1621 cgcgatccgc aagctcaatc ccagcgtgaa gctgccgtcg cggtccatcg cggtggtgta
     1681 tcgccgcgac ggttccggca cgaccttcgt tttcaccgat tatctgaaca aagtgagcga
     1741 taagtggaaa acggcggtcg gctcgaccac cgcggtcgag tggccggtcg gcaccggggt
     1801 caaaggcaac gaaggcgtcg cggcgagcgt cggcggcctc aagggcgcga tcggctacgt
     1861 cgaatacgct tacgcgaagc agaacaagct cacctatgcc aggctaatga acaaggccgg
     1921 caaggcggtg gcgccgagca tcgagtcgtt cagcgccgcc gcggccaacg cgaattggga
     1981 gggaacgtcc ggtttcggcg tcattctcac caatgaaccc ggcgccgcga gttggccgat
     2041 cgccggtgcg accttcatcc tcatgtacaa gcagccgagc gatcccgccg ccgccgcgga
     2101 ggcgctgaaa ttcttccact gggcctacgc caagggcggc aagatggcgc aggagctcga
     2161 ctacgtgccg atgccggcaa acgtcattgc cgcggttgag cggctgtggg ccggccagat
     2221 gcagaacgca caagggcgcc cgctgttcgt tccgccgaaa tagtcgtgct tcgggtttag
     2281 gactcgtgcc ttacttcgtc attgccgggc ttgacccggc aatccatcca ctttcgtaag
     2341 agttttttgc gaagaagatt gatgcggggg tcaagcccgc gcatgacgac atcgccgcgc
     2401 tcgccgaact tccaagcatc cacaatgact tgcgctgtca tgcaactgtt ataaagcagt
     2461 cgtagagcca tgggacgggc gcggcgggga cgcggccaac ccacgacgcg aagggcggat
     2521 tggccggcaa ctcgatcgtc gcgcacgcct tcggctcgcc ttttctctcg agcgcacggg
     2581 aggagtgtct tgcagctcat tcgcatgatc gtggcgatcg gcttgctcac caccgtcgct
     2641 gccgttgccg ccacccctgc ggtcggcgcc gagatttcgg gcgccggcgc cacctttcca
     2701 tatccgatct atgccaaatg ggccgaggcc tacaagaaag cgaccggcgt cgcggtgaac
     2761 taccagccgg tcggctcggg cgaggggatc aggcagatcc agaacaagga ggtgaccttc
     2821 ggcgcctccg acatgccgct caagccggcc gatctcgagg catacggtct cgcgcagttt
     2881 cccaccgtga tcggcggggt cgtcccggtg gtgaacctcg agggcatcaa gccgggcgag
     2941 ctcaccatcg acgggccgac cttggcgaag atcttcctcg gcgagatcaa gtcgtggaac
     3001 gacgccgcgc tgcgaaggct caatccaaac gtcaagttgc cgtcgcaggg aattgccgtg
     3061 gtgcaccgct ccgacggctc cggcacgacc ttcgtcttca ccgattatct gtcgaagatg
     3121 agctcggact ggcgttccaa ggtcgggtcg atcacgtccg tggattggcc gatcggcgtc
     3181 ggcgcgcgcg gcaacgaagg cgtcgccgcc agcgtcgccc gggt
//
LOCUS       DATCWM010000232         2777 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_169338, whole genome shotgun sequence.
ACCESSION   DATCWM010000232 DATCWM010000000
VERSION     DATCWM010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2777)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2777)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2777
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169338"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1602
                     /locus_tag="VIQ50_04515"
     CDS             <1..1602
                     /locus_tag="VIQ50_04515"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEY9359674.1"
                     /translation="PMMLCQHEEIAVQIAHGYAKATGRPMAVILHDLVGLLHACMAIY
                     YAYIDRASIFIIGATGPMDEGKRRPHIDWTHSALVQGNAVPDYVKWDYQPTSIEGVPE
                     SFARAFSIMTTEPQGPVYMCYDAALQEAPLAANVPLPPAGAAATPAPMAPDPDAIAAI
                     AEKLLAAEHPLLLAEYAGRRAGGFESLVALAETVGAAVWDVNSALNFPNKHPLCLSMD
                     HASLRHTDLVVGLDVNDWEKQLTELDSATRTRERLTPASCDFVEIGFGEINISKWAFD
                     YCRMQPCSIRALGDTALGIPQLTRLCKERVAREGKLASRIAERKAAIAKRHDEVWAKW
                     QEEARRNWDASPITFARLALEVWEVIKNEDWVLTANTLKQQVRKLWDFDKPYRHPGAE
                     LGTSTQIGISLGVALAHKGTGRVVVDIQPDGDLMFDAGALWIAAKYEIPMLVVMHNNR
                     AYYNDWEHQIRMARLRGTDESKAHIGMDLFAPEPDFAALARAMGCYGEGPIDKPQEVR
                     PALLRALAEVKKGRLALVDTITQHR"
     gene            complement(1615..2292)
                     /locus_tag="VIQ50_04520"
     CDS             complement(1615..2292)
                     /locus_tag="VIQ50_04520"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEY9359675.1"
                     /translation="MQILCTNGVKSVLLELIPSFERARDTKLAVTWGSTHALLKDLES
                     GVGGDVAILTAEAIDDLIKQGKVKPGSRVDLARSGIGAAVRKGAKRPDIASPEALKRA
                     LLAAKNVAHSKTGLSGIYFPTVLERLGIAEEMKAKIVMPDAGTPVGELVAKGEAEIGI
                     QQISELLPVAGIDIVGPLPPPLQKITIFSGGVLTAAKEASLAAALLAFLSAESPRLLN
                     AKGLEPA"
     gene            complement(2490..>2777)
                     /locus_tag="VIQ50_04525"
     CDS             complement(2490..>2777)
                     /locus_tag="VIQ50_04525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359676.1"
                     /translation="AGEPLAGWLSVMRFSTLQADAMGEGPEQLVIELERLVADKDALR
                     RQQAAQIIQLEQQLSERNAKLGELERILRWTHESRSWRLTAPLRKIKDWLF"
BASE COUNT          491 a          923 c          880 g          483 t
ORIGIN      
        1 ccgatgatgc tgtgccaaca cgaagagatc gcggtgcaga tcgcacacgg ctatgccaag
       61 gcgaccggcc ggccgatggc ggtgatcttg cacgacctcg tcgggctgct gcacgcctgc
      121 atggcgatct attacgccta catcgaccgg gcgtcgatct tcatcattgg cgcgaccggt
      181 ccgatggatg aaggcaagcg gcgcccgcac atcgactgga cgcattcggc gctggttcaa
      241 ggcaatgccg tgcccgacta cgtcaaatgg gactaccagc cgacctcgat cgagggcgtg
      301 ccggaaagct ttgcgcgcgc cttttcgatc atgaccaccg agccgcaggg cccggtctat
      361 atgtgttacg acgcggcgct gcaggaggcg ccgctggcgg cgaatgtgcc gctgccgccc
      421 gctggcgcgg cggcgacgcc ggcgccgatg gctcccgatc cagatgcgat cgccgcgatc
      481 gcggagaagc tgcttgccgc cgagcatccc ctgctgctcg ccgaatatgc cggccggcgt
      541 gcgggcggct tcgagagtct cgtggcgttg gcagagaccg tcggcgcggc agtgtgggat
      601 gtcaacagcg cgctcaattt tcccaacaag cacccgttgt gcctgagcat ggaccacgca
      661 tcgctccgcc acaccgatct ggtcgtcggt ctcgacgtga acgattggga gaagcagctc
      721 accgagctcg acagcgccac gcgcacgcgc gaacggctca cgccggcatc gtgcgacttc
      781 gtcgagatcg gcttcggcga gatcaatatc agcaagtggg cgttcgacta ttgccgcatg
      841 cagccctgct cgatccgcgc cttgggcgat accgcgctcg gcattccgca gctcacgcgg
      901 ctgtgcaagg agcgcgtcgc gcgcgagggc aagctcgcgt cccgcatcgc cgagcgcaaa
      961 gccgctatcg ccaagcgcca cgacgaagtc tgggcaaaat ggcaggagga ggcgcggcgc
     1021 aattgggatg cctctccgat caccttcgcc cgcctggcgc ttgaagtctg ggaggtgatc
     1081 aagaacgagg actgggtgct caccgcgaac acgctcaagc agcaggtccg caagctctgg
     1141 gatttcgaca agccctaccg gcatcccggc gccgagctcg gcacctcgac ccagatcggc
     1201 atctcgctcg gcgtggcgct cgcgcacaaa ggcacgggtc gcgtcgtggt cgacatccag
     1261 cccgacggcg atctgatgtt cgatgccggc gcgctctgga ttgccgctaa atatgaaatc
     1321 ccgatgctcg tcgtcatgca caacaaccgc gcctactaca acgactggga gcaccagatc
     1381 cgcatggcgc gattgcgcgg gacggacgag tccaaggccc atatcggcat ggacctgttc
     1441 gctccggagc ccgacttcgc cgcgctggcc cgcgccatgg gctgctacgg cgagggcccg
     1501 atcgacaagc cgcaggaggt acgtcccgcg ctgttgcgcg cgctcgccga ggtcaagaag
     1561 ggacggctgg cactcgtcga caccataacc cagcaccggt gattagtgcg cccgctacgc
     1621 cggctccagg cccttcgcgt tgagcaggcg cggagattcc gccgagagga atgctagcag
     1681 cgccgccgca aggctcgcct ccttcgccgc cgtcaatacg ccgcccgaga agatcgtgat
     1741 cttctgcagc gggggcggca gcgggccgac gatgtcgata ccagcgacgg gcagaagctc
     1801 gctgatctgc tggatgccga tctcggcctc gcccttggcg acgagctcgc cgaccggcgt
     1861 gcccgcatcc ggcatcacga tctttgcttt catctcctcg gcgatgccga gacgctcgag
     1921 caccgtggga aaatagatgc cgctcaagcc ggtcttggaa tgggcgacgt tcttggctgc
     1981 aagcagcgcg cgtttgagcg cctccggcga agcaatgtcg ggccgcttgg cacccttgcg
     2041 caccgcagct ccgatgccgg agcgggcgag atcgacgcgg ctgccgggtt tgaccttacc
     2101 ctgcttgata aggtcatcga tcgcctcggc ggtcagaatg gcgacgtcgc cgccgacgcc
     2161 gctttcgagg tccttgagga gcgcgtgcgt cgatccccag gtgaccgcaa gcttggtgtc
     2221 gcgggcgcgc tcaaacgaag ggatgagctc gagcagcacc gacttcacgc cgttggtgca
     2281 gagaatttgc atcgggcgat cctttcccaa atcgttgctc gttgccgcgg gctaggccaa
     2341 gatgccactg ctggcggcat atcgggcggc gggtgggaga acgagcagcg cttcttgtca
     2401 gaaccgcatc ggtgctccga cgctcaggcg gtgtagggcg cgaggaaggc accgcttcaa
     2461 atcgttctat aactcgcggt ctccactcgt cagaacagcc agtcttttat tttccgcagc
     2521 ggtgctgtca gacgccacga ccgcgactcg tgcgtccacc gcaagatccg ttccaactca
     2581 cccaatttgg cgttgcgctc cgacagctgc tgctccagct gaattatttg cgcggcctgt
     2641 tgcctgcgca aggcatcctt gtccgcgacc agccgttcca gttcaatcac cagctgttcc
     2701 ggcccctctc ccattgcgtc cgcttgcaat gtcgagaacc gcatcacgga aagccagccc
     2761 gcaagcggct ccccagc
//
LOCUS       DATCWM010000233         4570 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_207136, whole genome shotgun sequence.
ACCESSION   DATCWM010000233 DATCWM010000000
VERSION     DATCWM010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4570
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_207136"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..731)
                     /locus_tag="VIQ50_04530"
     CDS             complement(<1..731)
                     /locus_tag="VIQ50_04530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hybrid sensor histidine kinase/response
                     regulator"
                     /protein_id="HEY9359677.1"
                     /translation="MLQGWTVIAVALGYIGLLFVVASYGDRTRRFGREGRWRHFIYPL
                     SLAIYCTSWTFFGSVGLASRTGFDFLTIYVGPILLIGLCSPLIMRIVRLAKAQNITSI
                     ADFIAARYGKAQTVAATVALIAIIGTIPYIALQLKAVSASLTTILAPIGPASAAMQPV
                     LGDIALYVAVAMAIFAVLFGTRHIDATEHQDGLMLAIATESIVKLVAFVGVGVFVTFW
                     LFDGPLSLFAQALERPDTAAVLTREP"
     gene            complement(939..2168)
                     /gene="hemA"
                     /locus_tag="VIQ50_04535"
     CDS             complement(939..2168)
                     /gene="hemA"
                     /locus_tag="VIQ50_04535"
                     /EC_number="2.3.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003870 - 5-aminolevulinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-aminolevulinate synthase"
                     /protein_id="HEY9359678.1"
                     /translation="MNYEAYFADALIRLRDERRYRVFADLERLAGRFPRAVWHSPQGP
                     RDVVVWCSNDYLGMGQHPKVIGAMIETATRMGTGAGGTRNIAGTNHPLVDLERELADL
                     HRKEAALVFTSGYVSNETGISTIARLMPNCLILSDASNHNSMIEGIRQSKCEKQIFRH
                     NDVAHLEQLLRATDPTRPKLIVFETLYSMDGDVAPINRICDLAQHYGAMTYADEVHAV
                     GMYGPRGGGQAEHQGAMARIDVIEGTLAKAFGCLGGYIAASATLCDAVRSYAPGFIFT
                     TALPPAICAAATAAIRHLKSSSFERERHQERAARVKAVLDTAGLPVMPNDTHIVPLFV
                     GDPEKCKRATDLLLTEHGIYIQPINYPTVPKGTERLRITPTPYHEDALIYALAEALLE
                     VWERLDLPLKKRVLAAE"
     gene            2453..4162
                     /locus_tag="VIQ50_04540"
     CDS             2453..4162
                     /locus_tag="VIQ50_04540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEY9359679.1"
                     /translation="MTKNSYGLEHGLTNYGDCDFSLYLRRSFAQSMGYSRASLAKPVV
                     GIAYTPSGFNNCHRHFPELLEAVRRGVLAAGALPIAFPTISLGEVFLSPTSLKYRNLM
                     SIDTEEMIRAQPMDAVVLMGGCNKTVPAQLMGAVSAGRPAVMLVAGPMMTGRYRGERL
                     GACTDCRRFWARYRAGEVAEQEISEVEGQLAVTAGTCAVMGTASTMACIAEALGLVLP
                     GTAAIPAVHADRLRAAEATGTAAAALIGSERTPDRIVNAKSVENALRALLALGGSTNA
                     IIHLTAIAGRAGVKVSLEQLNELSDSTPVLVNLKPVGNGYMEDFFAAGGMGALLRELK
                     PVLHLDCLTVTGETLGERLASSAPAYVDRSIIAERDKPFEPQGGLIALFGNLAPRGAI
                     LKRSAADAKLFEHVGRAVVFSSLADLAARIDDPQLDVTPQDMLVLQNAGPHASDCMPE
                     AGYLPIPKKLAQRGIKDMIRVSDARMSGTAFGTIVLHVTPDAASGGPLGLVRSGDRIR
                     LSVKERRIDLLVDEPELKTRAAARKPVEMQAERGYAKLYAQEILGADEGCDFAFLRPA
                     AAA"
     gene            4184..>4570
                     /locus_tag="VIQ50_04545"
     CDS             4184..>4570
                     /locus_tag="VIQ50_04545"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEY9359680.1"
                     /translation="MAVESIFYSVSGLSCRGALVWDESAKAPRPLLLMAPNWRGVIKP
                     AIETGQMLAQAGYVVFVADMFGEGNGPVGTENPMEFLQPFLSDVPGMRRRIAAALDTL
                     TRESDRRAIGDINRRAAIGFCFGGLNV"
BASE COUNT          834 a         1414 c         1508 g          814 t
ORIGIN      
        1 ggctcgcgcg tgagcaccgc cgctgtgtcc ggccgctcca gcgcttgcgc aaacagcgag
       61 agcggtccgt caaacagcca gaaagtgacg aacacgccga caccgacgaa agcaaccagc
      121 ttgacgatcg attcggttgc gattgccagc atcagtccat cctgatgctc ggtggcgtcg
      181 atgtgccggg tcccgaatag gactgcgaaa atcgccattg ctacggcgac gtagagggca
      241 atatcgccca ataccggctg catcgctgcg ctagcgggtc cgataggcgc aaggatggta
      301 gtcagcgagg ccgagaccgc cttgagctga agcgcgatgt acggaatcgt gccgatgatc
      361 gcgatcagcg ccacggtcgc ggcgacggtt tgggctttgc cgtagcgggc ggcaatgaag
      421 tcggcgatcg aggtgatgtt ctgtgccttc gccaggcgca cgatgcgcat gatcagcggc
      481 gagcacagtc cgatcagaag aatcgggccg acgtaaatgg tcaggaaatc gaagccggtg
      541 cgcgaggcga gcccgaccga gccgaagaac gtccaagagg tgcaatagat cgcgagtgac
      601 agcggataga tgaaatgccg ccagcggccc tcgcggccaa atcgccgagt tcggtcccca
      661 tagcttgcaa ccacgaacag gaggccgatg tacccgagcg caacggcgat gacggtccag
      721 ccttgcagca tgatggttcg cggttcgtgg gtccgaagcc aggcgaacgc attctatcgc
      781 acgaacgcat gagcgagaat atcgctatcc cgggccggcg tggccgtctc agctcgagaa
      841 gaggggggac ggagttgccg cggaccagcc gaggtcggcg caaggcgccc gcatccgccg
      901 ggattttgcc tattcctcga gttcggcggc gctagaggtt attcagccgc cagcacgcgt
      961 tttttaagcg gcaagtcgag ccgctcccat acctcgagca gtgcctcggc gagcgcatag
     1021 atcagtgcgt cttcgtgata gggcgtcggc gtgatgcgta gccgctccgt ccccttcgga
     1081 acggtcggat agttgatcgg ctgaatgtaa attccatgct ccgtgagcag gagatcggta
     1141 gcgcgcttgc atttctcggg gtcgcccacg aacagcggca cgatatgcgt atcgttcggc
     1201 atgacgggca ggccggcggt gtccagtacc gccttgaccc gtgcggcgcg ctcctgatgg
     1261 cgctcgcgct cgaagctcga ggatttcaga tggcgaatgg cggccgttgc cgcggcgcag
     1321 atcgccggcg gaagcgccgt ggtgaagatg aaccccggcg catagctgcg caccgcgtcg
     1381 cacaacgtcg cgcttgccgc gatatagccg ccgagacagc cgaaggcctt tgccagcgtg
     1441 ccttcgatca cgtcgatgcg agccattgcg ccctggtgct ccgcttgtcc gccaccgcgc
     1501 gggccgtaca tgccgacggc atggacctcg tcggcatagg tcatggcgcc ataatgctgg
     1561 gcgaggtcgc agatgcgatt aatcggtgcc acgtcgccgt ccatggaata gagcgtttcg
     1621 aacacgatga gcttcggccg ggtcggatcg gtggcgcgca gcagttgctc cagatgcgcg
     1681 acgtcgttgt ggcggaatat ctgtttctcg cacttcgact ggcggatgcc ctcgatcatg
     1741 gagttgtggt ttgatgcgtc cgacaggatt aggcagttcg gcatcagcct ggcaatcgtc
     1801 gaaatgccgg tctcattgga cacatagcct gaggtgaaga cgagggcggc ctccttgcga
     1861 tgcaagtcgg cgagttcacg ctcgagatcg accagcgggt gattggtgcc ggcgatattg
     1921 cgggttccgc ccgcgccggt gcccatgcgg gtcgccgttt cgatcatcgc gccgatcact
     1981 ttggggtgtt ggcccatccc caggtagtcg ttcgaacacc acacgaccac gtcgcgcggt
     2041 ccttgcgggg aatgccagac cgcacgcggg aagcggccgg ccagccgctc aagatcggca
     2101 aatacccggt agcggcgttc gtccctgaga cggatcaggg catctgcaaa ataggcctcg
     2161 tagttcatga aaccgcgtgc tcccggggca ggggccatct tggaaccgtc ccaaattaga
     2221 ggcgttccag ggctcttgtc gaggcgataa tgcgcgcggc tcaaggccgc aaggcaaggg
     2281 gcggaaacac caacgcggcg cgggtgatat cgatgcccgg caaaacaatg gtgcggtgaa
     2341 acgggagggt gccgcgctgc ccaagtggcg cacggcacgt cagtaaacta acattcgagc
     2401 ccccgcgctg gccggcggaa gccaagcggg cgtgtctggc gagagtgtaa aggtgacaaa
     2461 gaactcgtac ggtctggagc acggcctcac caattacggc gactgcgact tctcgctgta
     2521 cttgcgccgt tcgttcgccc agtccatggg ctactcgcgg gcatcgctgg cgaagccggt
     2581 ggtcgggatc gcctatacgc cgtcgggttt caataactgc caccgtcatt ttccggagct
     2641 gctggaggcg gtgcggcgcg gggtgctcgc ggccggtgcg ctgccgatcg cctttcccac
     2701 gatctcgctt ggcgaagtat ttctcagccc cacgagcttg aagtatcgga acttgatgtc
     2761 gatcgatacc gaggaaatga tccgcgcgca gccgatggac gcggtcgtgc tcatgggcgg
     2821 ctgcaacaag acagtcccgg cgcagctaat gggcgcggta tcggccggcc ggcctgcggt
     2881 aatgctggtg gcaggcccca tgatgaccgg ccgctatcgc ggcgagcgcc tcggcgcctg
     2941 cacggattgc cggcgttttt gggcccgtta tcgcgccggt gaggtcgccg aacaggaaat
     3001 ttcggaggtc gaaggccagc tagcggtcac cgccggcacc tgcgcggtca tgggcacggc
     3061 ctcgaccatg gcctgcatcg ccgaagcgct cggtctcgtg ctgccgggca ccgccgcaat
     3121 tccggcggtc catgcggatc gcctgcgggc agcggaagca accggcactg cggccgcggc
     3181 gctcatcggc tccgagcgca caccggaccg gatcgtcaac gcgaagtccg tcgaaaacgc
     3241 cctgcgtgcc ctccttgcgc tcggtggctc caccaatgcg atcatccacc tcaccgcgat
     3301 cgccggccgt gccggcgtga aggtttcgct cgagcagctc aatgagcttt cggattcgac
     3361 ccccgtgctg gtcaatctga agccggtcgg caacggctat atggaggatt ttttcgccgc
     3421 cggcgggatg ggggcgctgt tgcgcgagct caagccggtt cttcatctcg attgcttgac
     3481 ggtcacgggc gagaccctgg gcgagcgtct tgcgtccagc gcccccgctt atgtcgaccg
     3541 ctcgattatc gccgaacgtg acaaaccttt cgaaccgcag ggagggttga tcgcgctgtt
     3601 cggaaacctc gccccaaggg gcgccatcct caagcgctcg gcggccgacg cgaagctctt
     3661 cgaacacgtg ggcagagcgg tggttttctc ctcgcttgcc gacctcgccg ctcgcatcga
     3721 cgacccgcag ctcgacgtca ccccacagga catgctcgtg ctgcagaacg ccggtcccca
     3781 cgcgagcgat tgcatgcccg aagccgggta tctgccgatc ccgaagaagc tcgcgcagcg
     3841 agggatcaaa gacatgatcc gagtctcgga tgcacgtatg agcggcacgg ccttcggaac
     3901 gatcgtgctg catgtcacgc cggatgcggc ctcggggggc ccgctcgggc tggtccgcag
     3961 cggcgaccgc atccgcctct cggtgaagga acgtcgcatc gatctcctcg tcgacgagcc
     4021 ggagctcaaa acgcgcgccg ccgcgcgcaa acccgtagaa atgcaggctg agcgcggcta
     4081 tgccaagctc tatgcccagg aaatcctcgg cgccgatgaa ggttgcgact tcgccttcct
     4141 gcggcccgcc gcagctgcgt agtgatatac ggaggaaaat tcgatggccg tcgagagcat
     4201 cttctattcg gtatccggcc tgagctgtcg cggcgcgctg gtatgggacg aaagcgcgaa
     4261 ggcgccgcgg ccgcttttac tgatggcgcc caattggcgc ggcgtcatca agcccgcgat
     4321 cgaaaccggt cagatgctcg cgcaagcagg gtacgtcgtc ttcgtcgccg acatgttcgg
     4381 cgaaggcaac gggccggtcg gtaccgaaaa cccgatggaa tttctgcagc cgttcttgtc
     4441 ggacgtgcct ggcatgcgcc ggcgcatcgc agccgcactc gatacgctga cgcgagaatc
     4501 cgaccggcgc gccattggcg atatcaaccg gcgcgcggcg atcggcttct gcttcggcgg
     4561 gctcaatgtc
//
LOCUS       DATCWM010000234         2946 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_261183, whole genome shotgun sequence.
ACCESSION   DATCWM010000234 DATCWM010000000
VERSION     DATCWM010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2946)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2946)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2946
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_261183"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..192)
                     /locus_tag="VIQ50_04550"
     CDS             complement(<1..192)
                     /locus_tag="VIQ50_04550"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9359681.1"
                     /translation="MTAKDFAVVTGGSTGIGAEICRQMLEAGYEVISLARRKPAQSHA
                     RLHAVEVDLMDRSATERAAA"
     gene            complement(189..974)
                     /locus_tag="VIQ50_04555"
     CDS             complement(189..974)
                     /locus_tag="VIQ50_04555"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEY9359682.1"
                     /translation="MTVDLMAFARAVANGDIRVIDLTQTLSQEFPTIVLPPELGQCAP
                     FRMEEVSRYDERGPAWYWNNISLGEHTGTHFDAPIHWISGKDLPNNAVDTINVAQFIA
                     PAAVIDCSRECAADPDFALTIPFVERWEARHGKIEPRSWVLLRTDWSKQPYTDYAGLR
                     DDGAHTPGPEPAVVKWFVEQRDVHGFGTETIGTDFGQGQHFNPPYPAHFYMHGKGRFG
                     LQCLTNLDLLPPKGAVIIAAPLKIKQGSGSPLRVLALVAGGNV"
     gene            complement(986..2227)
                     /locus_tag="VIQ50_04560"
     CDS             complement(986..2227)
                     /locus_tag="VIQ50_04560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008546285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY9359683.1"
                     /translation="MTEPLVRPRRKNPLKRTRLPLRPQGVRSRTAHGLTAAAAEGRFA
                     LQVCLDCDTVIYPPRDACPSCLSARIPFREVARGGTLIAETAVRTTTDPYFRERTPWR
                     VGTVKLDVGPVVVAHLHGDAVEGGRVRLELKLDKSGSAAAIALPEKDTENMADDPHLR
                     EMTCDPKFRRVLITDGRTGVGQAMAKAFSDAGAAIVFVGLADPWKPFAGMAGLRKIER
                     VEIVPLDVTDTESVTELAEQNGARIDIVVNTAEHIRAGGVVDRHGLTIAREEIDVRYL
                     GLLRLAQAFGPILRSRGADGVNSAAAFVNLLSVHALMNWPVYGSYSATEAACLSAAQC
                     MRAELRPGGVKVVNVFFGPLETEWFQTVPPPKVTPAALADAVVRALQCGLEDVFVGDV
                     AEDIRQRLAVNPKALEREMAN"
     gene            complement(2224..>2946)
                     /locus_tag="VIQ50_04565"
     CDS             complement(2224..>2946)
                     /locus_tag="VIQ50_04565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007755721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HEY9359684.1"
                     /translation="LITKHYMNSYGAKREDFAKICIAQRDNAMSIPHAMMKKKLTLDE
                     YMSARPIADPIHLFDCVMPCAGAEAFVVCREDVAKSLNLPSIRILSTIERHNAFPNDP
                     MQIRGGWELDIGELWSMAALTPKDVDFVQTYDDYPVISMMQFEDLGFCSKGEGPDFVR
                     SHTLTNDGTFPHNTSGGQLSVGQAGAAGGFLGLVEAMRQLTSQPLGSQVPNANACLVS
                     GFGMINYDRGLSSCAAVLARAA"
BASE COUNT          544 a          967 c          910 g          525 t
ORIGIN      
        1 ggcggcggcg cgctcggtcg ccgagcgatc catgagatcg acctctaccg cgtgcagcct
       61 ggcatgcgat tgagcgggct tgcgccgagc aagcgaaatg acctcgtagc ccgcctccag
      121 catctgccgg caaatttccg cgccgatgcc ggttgatccg cccgtgacca cggcaaaatc
      181 ttttgccgtc acacattccc tcccgccacc agcgccagaa cgcgcaacgg gctgcccgac
      241 ccctgcttga tcttcagcgg cgccgcgatg atgacggcgc ccttgggcgg cagcagatcc
      301 aaattcgtga ggcactgcag cccaaagcgg cctttgccgt gcatgtagaa atgggcggga
      361 tacggcggat tgaagtgctg cccttgaccg aaatcggtgc cgatggtctc cgtgccgaat
      421 ccatgcacgt cgcgctgttc gacgaaccac ttcacgacag cgggctccgg ccccggagtg
      481 tgagcgccat cgtcgcgcag tccggcataa tccgtatagg gttgcttcga ccagtccgtg
      541 cgcagcaaga cccaacttcg cggctcgatc ttgccgtggc gcgcctccca acgctcgaca
      601 aagggaatcg tcaacgcgaa atcggggtcg gctgcgcact ccctcgagca atcgatcacg
      661 gcagccggtg cgatgaactg cgcgacgttg atcgtatcga ccgcgttgtt cggcagatcc
      721 ttgccggaaa tccagtggat cggcgcatcg aagtgcgtcc cagtgtgctc gccgagacta
      781 atgttgttcc agtaccaagc cggtccgcgc tcgtcgtacc gcgacacctc ttccattcgg
      841 aacggcgcgc attgtcccaa ctcgggcggc agcacgatgg tcgggaattc ctgcgacagg
      901 gtctgcgtca ggtcgatgac cctgatgtcg ccgttggcta ccgcgcgcgc gaacgccatg
      961 agatcgactg tcatgaggac acccgtcagt ttgccatttc gcgctcgagc gcctttgggt
     1021 tgacggcaag gcgttgccgg atgtcctcgg cgacgtcgcc cacaaacacg tcctcgagcc
     1081 cgcactggag cgcgcgaact acggcatcgg cgagcgccgc cggcgtcacc ttcggcggcg
     1141 gcacggtttg gaaccattcc gtctcgagcg ggccgaagaa tacgttcacc accttgaccc
     1201 cgcccgggcg cagttccgcg cgcatgcact gcgccgccga cagacaggcc gcctcggtcg
     1261 cggaatagct cccgtagacg ggccagttca tcagcgcatg caccgacagc agattgacga
     1321 aggccgcggc cgaattgacg ccgtcggcgc cgcgagaacg aaggatcggg ccgaaggcct
     1381 gtgcaagccg cagcaggccg agatagcgaa catcgatctc ctcgcgcgcg atcgtcagac
     1441 catgacgatc cacgacgccg ccggcgcgaa tgtgttccgc cgtgttgacc acgatgtcga
     1501 tgcgggcgcc gttctgttcg gccagttcgg tcaccgattc ggtgtcggtc acgtcgagcg
     1561 gcacgatttc gacgcgttcg attttgcgga ggccggccat cccggcaaac ggtttccacg
     1621 gatccgcaag tccgacaaaa acgatcgccg ctccggcatc ggaaaacgct ttggccatag
     1681 cctgcccaac gcccgtacgg ccatccgtga tcaggacgcg gcggaacttc ggatcgcacg
     1741 tcatttcacg caaatgcgga tcatcagcca tgttctcggt gtccttttcc ggcagcgcga
     1801 tcgccgccgc cgagccgctt ttgtcgagct tgagctcgag ccgcacgcgc ccgccctcca
     1861 ccgcatcgcc gtgaagatgc gcaacgacga ccgggccgac atcgagtttc acagtcccca
     1921 cccgccaagg cgtgcgctcg cgaaaatagg gatcggtcgt cgtccgcacg gccgtttcgg
     1981 cgatgagcgt gccgccgcga gccacctcgc ggaatggaat gcgcgccgac aagcatgacg
     2041 gacaagcgtc gcgtgggggg taaatcacag tgtcgcagtc cagacaaacc tgcaatgcga
     2101 agcgcccctc ggccgccgca gcggtgagcc catgcgctgt gcggctacgc acgccttgcg
     2161 ggcgcagcgg cagccgcgtc cgcttgagcg gattcttgcg tcttgggcga acaagcggct
     2221 cggtcacgcg gctctcgcaa gaacggcagc gcaggatgac aggccccgat cgtaattgat
     2281 catgccgaat ccggaaacta ggcaggcatt ggcattgggc acctgcgaac caagcggctg
     2341 cgaggtgagc tgacgcatgg cctcgaccag cccgagaaag cccccggccg cgcccgcctg
     2401 tccgaccgag agctggccac ccgacgtgtt gtgcgggaac gtgccgtcgt tggtcagcgt
     2461 atgcgaccgc acgaagtccg gtccctcgcc cttggagcag aagccgaggt cttcaaactg
     2521 catcatcgat atgaccggat aatcgtcgta agtctgcacg aaatcgacat ccttcggcgt
     2581 gagggcggcc atcgaccaca gttcgccgat atcgagctcc cagccgccgc gtatctgcat
     2641 tgggtcgttg ggaaaggcgt tgtgccgctc gattgtcgac aggatgcgga tgctcggcag
     2701 attgagcgac ttggcgacgt cttcgcggca cacgacgaag gcctcggcgc ccgcgcatgg
     2761 catcacgcag tcgaagagat gtatcggatc ggcaatcggt cgcgccgaca tgtattcatc
     2821 cagcgtcagc ttcttcttca tcatcgcgtg cgggatcgac atggcattgt cgcgctgcgc
     2881 gatgcatatc ttggcaaaat cttcccgctt ggcgccgtag ctgttcatgt agtgcttcgt
     2941 gatcag
//
LOCUS       DATCWM010000235         2017 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_261185, whole genome shotgun sequence.
ACCESSION   DATCWM010000235 DATCWM010000000
VERSION     DATCWM010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2017
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_261185"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1336
                     /locus_tag="VIQ50_04570"
     CDS             <1..1336
                     /locus_tag="VIQ50_04570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YcaO-like family protein"
                     /protein_id="HEY9359685.1"
                     /translation="AKLIMTSGGYRTVPARATVTRFRKHVSPLTGVVTQLERIEADLP
                     LNTNFYAAHNFSAPARNVDELREGLSGGSFGKGSTAEQGEASALMEAIERYSGIFQGD
                     EIRVTRRFTDFPSGEAILPNDVLLFSDAQDRQDQAQTIDADPSMPVPAPFDRSAEIEW
                     SPVWSLRDGRFKYLPTSLLYFFYRGPPTAYHVHADSNGCAAGNTLEEAIVQGFLELVE
                     RDAYAIWWYNRLQRAEVDLGQFDEAYIRDLKIQLAETGRRLWMLDVTSDLGIPSFVTI
                     THWMENSQEFVEFGSGSHFDARIAALRAMTELNQFLSIGLMGGRDPNPSSQESGQDNL
                     PPFRLQDHPYLTPSGAAAVRPDFGSKFGNLDTREQVTACVNLAKRAGLDFLVLDQTRP
                     DIDVPVARVIVPGLRHFYRRFAPGRLYDVPVKLGWQDRPLSESELNPLHPQT"
     gene            1349..>2017
                     /locus_tag="VIQ50_04575"
     CDS             1349..>2017
                     /locus_tag="VIQ50_04575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dehydrogenase"
                     /protein_id="HEY9359686.1"
                     /translation="MRAPGIKRGRRAATLSARLSAHITLEARADGNIVACFGGYSVGF
                     GQFGAGAAAGAQELRRGLPLGSFASQRRSVEKEIHLLVRRLARHGLLEYSLGRPHGED
                     QVVIEPQLPDYWPQTPPLGNADVLVLSRFAYMRRRGNEMVLESPRAGALFRICSPKTA
                     AALATLSSPQQVKQLRRRDGFPGLELLALLLDCQILFKVDAARNSGLRPAEGDDNLIL
                     WDFHD"
BASE COUNT          375 a          632 c          622 g          388 t
ORIGIN      
        1 cgccaaactg attatgacga gcggaggata ccggaccgta ccggcgcggg cgacggtgac
       61 acgtttccga aagcatgtga gccctctcac cggggtggtc acgcagctcg agcggatcga
      121 agccgatttg cccctgaata ctaacttcta tgcggcgcac aatttctccg caccagcccg
      181 gaacgtcgat gagctcagag agggattgag tggcggcagc tttggcaagg gcagcactgc
      241 cgagcagggt gaagccagcg cgctcatgga ggcgatcgag cgctattccg ggatttttca
      301 gggcgacgag atcagagtga cccggcggtt cacggatttc ccatcgggcg aggccattct
      361 acctaacgat gtcttgctgt tcagcgacgc gcaggaccgg caagatcagg cgcagacgat
      421 cgacgcagac ccgtcgatgc cggtgccagc ccccttcgat cgatcggccg agatcgaatg
      481 gtcgccggtc tggtcgctgc gcgacggacg gttcaaatat cttccgacca gcttgttata
      541 ttttttttac cggggcccgc ctaccgccta ccatgtgcat gcggattcca acggctgtgc
      601 ggccggcaac acgctcgagg aggcaatcgt ccaagggttc ctcgagttgg tggaacggga
      661 tgcatacgcg atctggtggt acaatcgatt gcaacgggcg gaagtggatc tcggccagtt
      721 cgatgaagcc tacatccgtg atctgaaaat ccagcttgcc gaaaccggac gccgcctctg
      781 gatgctcgac gtcaccagcg atctcgggat tccgagcttt gtgaccataa cgcactggat
      841 ggaaaactcg caagaatttg tcgagttcgg ttccggctcg catttcgatg cgcggatcgc
      901 ggcgttacgc gcgatgaccg agctcaacca atttttgtcc atcggcctca tgggtggccg
      961 ggatccgaac ccgtcgagcc aagaatcggg ccaggacaac ctccctccat ttcggctgca
     1021 ggaccatccc tatttgacgc cgagcggcgc agcggccgtc cgaccagact ttggctcgaa
     1081 gttcggcaat ctcgacacgc gcgagcaggt gaccgcctgc gtgaacctcg ccaagcgcgc
     1141 gggcctcgat ttcctcgtcc tcgatcagac gcgccccgac atcgatgtcc cggtcgccag
     1201 agtgatcgtt ccgggattgc ggcatttcta tcgccgcttc gcacctggcc ggctttacga
     1261 tgtgccggtc aagctcggat ggcaagaccg accgctgtcg gaaagcgagc tcaatccgct
     1321 tcacccccag acctgagggg cacttggctt gcgcgctccc ggaataaagc gagggcggcg
     1381 ggctgcaacc ttatccgccc ggctcagcgc tcacatcacg ctcgaggcgc gcgcggatgg
     1441 aaacatcgtc gcctgcttcg gcggctattc ggtgggtttt ggacagttcg gcgcaggtgc
     1501 ggcggctggc gcgcaggagt tgcgcagggg tttgccgctc ggctcatttg catcgcaacg
     1561 ccgaagcgtc gaaaaagaga tccacctgtt ggtccggcga ttggcccggc acgggctgtt
     1621 ggagtactcc ctcggccgcc cccacggcga ggatcaagtc gtcatcgaac cgcagcttcc
     1681 cgactattgg ccgcaaacgc cgccgctcgg caacgccgat gttctcgtgc tgtcgcggtt
     1741 cgcgtacatg cgccggcgcg gcaacgagat ggtcctggaa tcaccgcgcg ccggcgcgct
     1801 gttcagaatt tgcagtccga agactgcggc cgccctggcg accctatcct caccgcaaca
     1861 agtcaagcag ctgcgccggc gggacggttt tcccggcctc gagcttctgg ccctgctgtt
     1921 ggattgccag atcctattca aggtcgacgc cgctcgcaac agcgggctgc ggccggccga
     1981 aggcgacgac aacctcattc tctgggattt ccacgat
//
LOCUS       DATCWM010000236         2767 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_234081, whole genome shotgun sequence.
ACCESSION   DATCWM010000236 DATCWM010000000
VERSION     DATCWM010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2767)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2767)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2767
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234081"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..956)
                     /locus_tag="VIQ50_04580"
     CDS             complement(<1..956)
                     /locus_tag="VIQ50_04580"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015049.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family O-acyltransferase"
                     /protein_id="HEY9359687.1"
                     /translation="MLIVASLIFYAAAGPFDMAVFLSAVILNWLVQVAIPADRRRIVA
                     AVVVNIGLIGYFKYRNMLLGDANVTGSFVDTALPLGISFYSFQALAYHIDIVRHRNAP
                     ARSFPEFLLFKAFFPQLIAGPIVRPNQTLPQIQRIFDNKWRRHRLLVFGLGLIVLGLV
                     KKVVLADSLAPVVDDIFYARPSSAYFAWLGAVLFMFQIYFDFSGYSDIAIGSAYLLGV
                     RLPRNFATPFLAPNIQQLWQRWHITLTLFLRDYVFLPLADMRIAARRYRVAQHFCAMV
                     LTMALCGLWHGAGWNFVLWGALQGIAMVFAALWSRYLRSPPAA"
     gene            complement(1199..>2767)
                     /locus_tag="VIQ50_04585"
     CDS             complement(1199..>2767)
                     /locus_tag="VIQ50_04585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008130949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acyl-AMP ligase"
                     /protein_id="HEY9359688.1"
                     /translation="ARLAEAQIGDRALLLFGPGLDFIVAYFGCLLAGVIAVPMMLPRR
                     NSSLDSSASIVANCSPRFAITNAQVSRARPDVVERFEKLKMEWLIVDSERKSLPDRDH
                     QLPIPGPDDIAFLQYTSGSSSDPKGVMVTHGNLIENLEMIRVILDNTARSTYASWVPL
                     YHDMGLILNVLQSLYIGAACVLLAPVTFIQRPLRWLRAIHDYRAEIAGAPNFAFDLCV
                     QRFRADQVKALDLSGWKVAFNGAEPVRADTIERFTATFRPYGFDPRAINPLYGMAEAT
                     LLISGAPRGSGPVIRAVSRDAFQRHQLAPAASADEAHRVVGCGRNLIDQRIAIVDPDT
                     RRRLAADQIGEVWVGGPHICKGYWRNPEATTSTFQARIAGEAEPWLRTGDLGFMDEAG
                     ELFITGRIKDIIIVRGINYYPQDIENTVYESHPALRRNCGAAFSVLTGDNQEKVVLVQ
                     EVERTHRRDIEIEEIVACIREAVANEHEIALDSIVLIRPGSIPKTTSGKIQRSAARRM
                     WLQNSFETIDALSI"
BASE COUNT          594 a          822 c          864 g          487 t
ORIGIN      
        1 gccgcgggcg gcgatcgaag gtatctcgac cacagcgccg cgaacaccat cgcaatgcct
       61 tgcagcgccc cccacaggac gaaattccag cctgcgccgt gccacaggcc gcacaatgcc
      121 atggtcagaa ccatggcgca aaaatgctgc gccacgcggt agcgccgcgc cgcgatccgc
      181 atatcggcga gcgggagaaa cacataatcg cgcaggaaca gtgtaagcgt gatgtgccag
      241 cgctgccaca gctgctgaat gttgggggcc agaaagggag tcgcgaaatt tcggggaagc
      301 cgcaccccca acagataggc cgaaccgatg gcgatatccg aataaccgga gaaatcgaaa
      361 tagatctgaa acatgaacag cacggcgccg agccaagcaa aataggcgct gctcggtcgg
      421 gcatagaaaa tgtcgtcgac gacgggagcg aggctgtccg ccagaaccac cttcttcacg
      481 agtcccaaca cgatgagccc gagtccgaac acgagcaacc gatgccgccg ccatttattg
      541 tcgaagatgc gctgaatctg cggcagcgtc tgattgggcc ggacgatcgg gccggcaatg
      601 agttgcggaa agaatgcctt gaacaggagg aactcgggga acgagcgtgc cggcgcgttg
      661 cggtggcgta cgatgtcgat gtggtaggcc aaagcctgaa agctgtagaa ggagatgcca
      721 agcggcagcg cggtatcgac aaagctgccg gttacgttgg cgtccccaag cagcatgttg
      781 cggtacttga aatacccgat caggcctatg ttgacgacga cggcggccac gatgcggcgg
      841 cggtccgcgg gaatagcgac ctggaccagc caattgagta tgaccgcact caagaacacg
      901 gccatgtcga acggcccggc cgccgcatag aatatcaagc tcgcaacaat cagcatcaat
      961 gcgcgccatg gaccgattgc catccaggcg acgcagcagg tcagcagtaa tgcgtaagcg
     1021 agtgaattaa acggcattcg accctgctcg ttgtcgcgac cttgcgggca aggtcaggca
     1081 atcccaacca cgccggtgaa caaagtcgcc ccggggcgca tggtgcccac ggcatctgcg
     1141 gcataatttc tgtccgcgcg gcccgcgcgg tgaggcacgc cccgccgtaa cgcccagatc
     1201 agatcgacaa tgcgtcaatg gtctcgaatg aattctgcag ccacatccgc cgggcggcgc
     1261 tgcgctggat cttgccactc gtcgttttcg gaatgctgcc ggggcgaata agcacgatcg
     1321 agtccagcgc gatttcgtgc tcgtttgcga ccgcctcgcg gatgcaggcg acgatttcct
     1381 cgatctcgat gtcgcggcga tgggtgcgtt ccacctcttg gaccaggacc accttttctt
     1441 ggttgtctcc agtgagcacc gagaatgcag ccccgcagtt ccgccgcagc gccggatggg
     1501 attcatagac cgtgttctcg atgtcctgtg gatagtagtt gatgccgcgc acgatgatga
     1561 tgtccttgat gcggcctgtg atgaacagct ctccggcttc gtccatgaag ccgagatcgc
     1621 cggtgcgcag ccacggttcg gcttcccccg cgatgcgtgc ctggaacgtc gatgtggtcg
     1681 cctccgggtt gcgccaatag cctttgcaga tgtgaggtcc gcccacccat acctcgccga
     1741 tctggtcggc ggcgagccgc cgccgcgtgt ccggatcgac aatcgcgatg cgctggtcga
     1801 tgaggttgcg gccgcagccc accacgcgat gcgcctcatc ggcgctagcg gccggagcga
     1861 gttgatgacg ttgaaacgcg tcgcggctga cggcgcgtat gaccggaccg ctacccctgg
     1921 gggctccgga gatcaacaat gtcgcttcgg ccatgccgta gagcgggttg atcgcgcgtg
     1981 gatcgaagcc atagggacgg aacgtcgcgg taaaccgctc gatggtatcc gctcgcaccg
     2041 gctcggcgcc gttgaatgcg actttccagc ctgacaagtc gagagccttc acctggtcgg
     2101 cgcgaaatcg ctggacgcag aggtcgaagg cgaagtttgg tgctccggcg atttcggcgc
     2161 ggtaatcatg gatcgcgcgc aaccatcgca gcgggcgctg aatgaatgtg accggcgcca
     2221 acagcacaca cgccgcgccg atataaagcg actgcagcac attcaggatg aggcccatat
     2281 cgtgatagag cggaacccag ctcgcatagg tcgatcgtgc ggtgttgtcc aagatcaccc
     2341 gtatcatctc gagattttcg atgagattgc cgtgagtgac catcacgccc tttggatccg
     2401 agctcgagcc cgaggtgtac tgcaggaagg cgatgtcgtc gggtccagga attggcaact
     2461 gatgatctcg gtcaggcaac gacttgcgtt ccgaatcgac aatgagccat tccattttga
     2521 gtttctcgaa tcgctcgacc acgtccggcc gagcgcggct cacctgtgca ttcgtgatcg
     2581 caaagcgagg ggaacaattg gcaacaatgc tggcgctcga atcgagcgag ctgttgcgtc
     2641 gaggaagcat catcgggacg gcgatgacgc ccgccaggag gcacccgaaa taggcaacga
     2701 tgaaatcgag cccggggccg aacagcagca gcgcccgatc gcctatttga gcttcggcga
     2761 gccgtgc
//
LOCUS       DATCWM010000237         2402 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_261201, whole genome shotgun sequence.
ACCESSION   DATCWM010000237 DATCWM010000000
VERSION     DATCWM010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2402)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2402)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2402
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_261201"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..259
                     /locus_tag="VIQ50_04590"
     CDS             <1..259
                     /locus_tag="VIQ50_04590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012109672.1"
                     /note="activates fatty acids by binding to coenzyme A;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HEY9359689.1"
                     /translation="EAAVIGVKHPKWDERPLLIVVLKKNQSASRDEILQFMQGKVAKW
                     SLPEEVVFVDEIPHTATGKIQKTVLRERFKDFVLPSAVAAQ"
     gene            439..1287
                     /locus_tag="VIQ50_04595"
     CDS             439..1287
                     /locus_tag="VIQ50_04595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1499 domain-containing protein"
                     /protein_id="HEY9359690.1"
                     /translation="MARRYIPSEPTSRLAIWARRMAGFAFLAAFLAVLIVRSGLLENR
                     PALATFAGALATAVVALLLALSAFVVIWMEGLAGIGAAVTAMLVSLALLAYPAYLGIR
                     AYRLPWIYDITTDPIDPPRYEALARLRVRDANPTTYAGLYAADQQRSAYPDVGPLGTN
                     ATAQAAYDAALAVVNKRRWRVVDARPPQAGRREGRIEAVARTPIMGFRDDVVIRVRAE
                     TDGARIDARSSSRYGAFDFGTNAARVRGLMNDIEDAIRAQRPERPPAQQPEKKSTPSK
                     KGRTKS"
     gene            complement(1317..2231)
                     /locus_tag="VIQ50_04600"
     CDS             complement(1317..2231)
                     /locus_tag="VIQ50_04600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY9359691.1"
                     /translation="MSADIPFDRNFELAPETVEEVVPGVRRLLANNPGPFTFKGTVSY
                     IVGRGQVAIIDPGPLDETHVATLLDAVRGETVTHIFVTHTHRDHSPAVAPIKAATGAL
                     VLAEGPHRPARALHVGEAPRMDASNDTEFRPDRTLADGDVVTGPGWTIEAVATPGHTA
                     NHMAFALKEADLLFSGDHVMAWSTPVVAPPDGAMSDYMASLRKLARRSEPIYLPGHGG
                     LVREAPQFVQHYIHHRQGREAAILRRLAKGEADIPTLVRAIYIGLDPRLVHAAGLSVL
                     AHLEDLTARGLVATEGEPSIEGRYRLAR"
BASE COUNT          390 a          804 c          796 g          412 t
ORIGIN      
        1 ggaggcggcg gtcatcggcg tcaagcatcc caagtgggac gagcggccgc tgctcatcgt
       61 ggttctcaag aagaatcagt cggccagccg ggacgagatc ttgcaattca tgcagggcaa
      121 agttgccaag tggtcgctgc ccgaggaggt cgttttcgtc gacgagatcc cgcacaccgc
      181 gacgggcaag atccagaaga ccgtactgcg cgagcggttc aaggatttcg tgctgccgag
      241 cgccgtcgcc gcccagtgag ccgatctctc gcctgccgac attctcacgc gcgaaacgct
      301 cgcattgtct cggcccgatg cgctaaaagc tccccatcac tgcggtctcc tccaggaagc
      361 catcgcatga ccactttcga tgcgaccgtc tgcgcggcgc aatcgggcac tgtctgctcg
      421 ttttgctaag atagaccgat ggcccgccgc tacatcccat cggagccgac ctcgcggctc
      481 gccatttggg cgcggcgcat ggccggattc gcttttttgg ccgctttcct cgcggtcctc
      541 atcgtgcgct cgggcctcct ggaaaaccgg cccgcgcttg caactttcgc cggcgcgctg
      601 gccactgccg tcgttgcgct cctcctcgcg ctttccgcct ttgtcgtgat ctggatggaa
      661 ggtctggccg gcataggcgc tgcagtgacg gcgatgctgg tctcgctcgc gctgctcgcc
      721 tatccggcct atttggggat cagagcctat cggctgccgt ggatctatga catcaccacc
      781 gatccgatcg atccgccacg ctatgaagcg ctggcgcggt tgcgcgtgcg cgacgccaat
      841 ccgaccacgt atgccgggct ctatgccgcg gaccagcagc gcagcgccta tccagacgtg
      901 gggccgctcg ggaccaatgc gacggcgcag gccgcttacg atgccgcgct cgcggtggtg
      961 aacaagcgca ggtggcgcgt cgtcgacgcg cgcccgccgc aggccggccg ccgcgaaggg
     1021 cgtatcgaag ccgtggcccg cacgccgatc atgggattcc gcgacgatgt cgtaattcgc
     1081 gtgcgcgccg agaccgacgg cgcgcgcatc gacgcgcgct cctcctcgcg ctacggcgca
     1141 ttcgatttcg gcaccaatgc cgcgcgtgtg cgcggcctga tgaacgacat cgaggatgcc
     1201 atccgcgcgc aaaggccgga gcggccgccg gcccagcagc cggagaaaaa atccactccc
     1261 tccaagaaag gcaggaccaa gagttgaggc gcgttctttg gtctcgaagc gccgcgtcaa
     1321 cgtgccaagc ggtagcggcc ttcgatcgaa ggctcgccct cggtcgcgac aagcccgcgc
     1381 gcggtcaaat cctcgagatg cgcgagcacc gataggccgg ccgcgtgcac gaggcgcggg
     1441 tcgagcccga tataaatcgc gcgcacgagg gtggggatat cggcttcgcc cttggccaga
     1501 cggcgcagga tcgcagcctc gcgaccttgc cggtggtgga tgtagtgctg cacgaactgc
     1561 ggagcctcgc gcaccaggcc gccgtggccc ggtaggtaga tcggctcgga tcgacgcgcg
     1621 agctttctca gcgaggccat gtaatcgctc atcgctccgt ccggcggcgc gacgaccggc
     1681 gtcgaccacg ccatgacgtg atcgccggag aacaggagat cggcctcctt gagcgcaaac
     1741 gccatatggt tggcggtgtg gccgggcgtc gccaccgcct cgatggtcca acccgggccg
     1801 gtgacgacgt cgccgtcggc gagcgtacgg tccggccgga actcggtatc gttgcttgca
     1861 tccatgcgcg gcgcctcgcc gacgtggagc gctcgcgcgg gacggtgcgg gccttcggcc
     1921 agcaccaagg ctcctgtcgc cgccttgatc ggcgccactg cgggggagtg atcgcgatgg
     1981 gtgtgagtga cgaaaatatg cgtgacggtt tctcctcgca ccgcgtccag aagcgtggcg
     2041 acgtgagtct cgtcgagcgg accgggatcg atgatggcga cctgccctcg accgacaatg
     2101 taggaaaccg tccccttgaa cgtgaatggc ccgggattgt tggcgaggag ccgccgcacg
     2161 cccggcacga cctcctccac cgtctccggg gcaagctcga agttgcgatc gaacggaatg
     2221 tcggcgctca tgcgaaagtt cgcggccgcg ccggcacggg tcgagattgc acgatgctcg
     2281 ctcggcggat cgtcagccga gcttgcggcc gatgatgtcc tcgcagcgca ggtcgcccgc
     2341 ctcttcgccg aggtagagcg cccccgacat ggcggttcgc atccggttcg acggcgctcc
     2401 tg
//
LOCUS       DATCWM010000238         3193 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_477020, whole genome shotgun sequence.
ACCESSION   DATCWM010000238 DATCWM010000000
VERSION     DATCWM010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3193
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_477020"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(226..1122)
                     /locus_tag="VIQ50_04605"
     CDS             complement(226..1122)
                     /locus_tag="VIQ50_04605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY9359692.1"
                     /translation="MAPKNLVRVVLWMTGALLSFSAMAVSVRILAATLGVMEILALRA
                     GLGLLVMATLAALRADLRATINCRHIRLHLFRNTVHVGSSYLWAMSLLLIPLAMTFAL
                     EFTTPAWTLLLAAPILGERLTASRIGAVVLGLLGVLVILRPGLATFQPGALLALAAAF
                     GLAVTLISTKKLTRTDSTFAILFWMMLIQLPIALLASEPLFVTKLTQAQAPAVIGIGV
                     SGLVSHYCLTNAFRAGDAGVVVPLDFMRIPLIAVIGWWLYGESLDVFVFLGAGLIVTG
                     ILWNLRSEATRGRRADSTACTH"
     gene            complement(1268..1801)
                     /locus_tag="VIQ50_04610"
     CDS             complement(1268..1801)
                     /locus_tag="VIQ50_04610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018697804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEY9359693.1"
                     /translation="MTNSGPVRDNAAHVDAACAEAPLLKLEDFLPHRLNVLSSLVSQA
                     LTRVYGRYGIGIPEWRVLVTLGENGVMTGKAVGAHTHMHKTKVSRAVAQLEQRKFLSR
                     RANRADLRESFLSLTPAGREVYEELAPTAHAFMDRLAEVVAPADRPAFDRAMKQLTER
                     SAELVAEIESGTTDGKV"
     gene            complement(2221..2517)
                     /locus_tag="VIQ50_04615"
     CDS             complement(2221..2517)
                     /locus_tag="VIQ50_04615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359694.1"
                     /translation="MRYVFAALVLAGSVFATAAQAEKRTFIIANNSDGYGVDRCLATG
                     ATCGAAVATAYCQSRDYMQAASYRRIERAEIASSEPATTGTSVRQEFVAIECLR"
     gene            2978..>3193
                     /locus_tag="VIQ50_04620"
     CDS             2978..>3193
                     /locus_tag="VIQ50_04620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEY9359695.1"
                     /translation="MKLTLYDTLTRAKRAFTPLDPAHVRMYVCGPTVYDFAHIGNARP
                     VIVFDVLFRLLRHVYGAEHVIHVRNITD"
BASE COUNT          611 a         1011 c         1035 g          536 t
ORIGIN      
        1 gcctcaatca cgttgccgag gtcgcccgtg agtttgtcgt caggcgatga ggtcccccac
       61 atctttacac gaaactcgcg tctacagccc ggagaatttt tggtcaccac tgcaaaagga
      121 cttttgcaac acaatcggca cttctcggac ctcggggaat gtccgacttg agtctgcaaa
      181 gtgagctaaa gcagacatcg atcacgtcgc cgtcccagtc acgaatcaat gagtacacgc
      241 cgtggaatca gcccttcgtc ctcgcgtcgc ctcgctgcgc aggttccaca ggatgccggt
      301 aacgatcagg cctgcgccga gaaatacgaa gacgtccagg gactcgccgt agagccacca
      361 gccgatcact gcgatcagcg ggatgcgcat gaaatcgagc ggcaccacca cgccggcgtc
      421 gccggcccga aaggcattgg tcaggcagta atgcgagact agtcccgaga cgccgatgcc
      481 gatgacggcc ggggcctgcg cttgcgtgag cttggtcacg aacaatggct cggaggcgag
      541 gagcgcaatc ggcagctgga tgagcatcat ccagaaaagg attgcgaaag tgctgtccgt
      601 gcgcgtgagc ttctttgtgg agatcagagt gacggccagc ccgaacgccg ccgcgagggc
      661 cagcagtgct cccggctgaa acgtcgccag acccggccgc agaatgacca acacgccgag
      721 aagacctaac accacggcgc cgatccggct cgcggtcagc cgctcgccta ggattggagc
      781 ggcgagcagc agcgtccatg ccggcgtggt gaattcgagc gcaaaggtca tcgccaacgg
      841 gatgagcaga aggctcatcg cccacagata cgacgatccg acgtgaacgg tgttgcgaaa
      901 gaggtgcagc cgaatatggc ggcagttgat cgttgcgcgc aggtcggcgc gcagtgcggc
      961 cagcgtggcc atgacgagga ggccgagacc tgcgcgcaac gccagaatct ccatcacccc
     1021 tagtgtggcg gcgaggattc gcaccgagac ggccatggcc gagaacgaca gcagcgcgcc
     1081 agtcatccag aggacgacgc gaacgagatt tttgggggcc acgcggagcc tttagcagcc
     1141 aggccttagg aatgggtgcg gggagggcgg cgcgatgcgc acccggtagg ccgccgatga
     1201 atgaaaatag gcataaagct ctacgtctcc tccttggctg ggcgatgctc gatcgtcggg
     1261 cgcgagctca gaccttgccg tccgtggtgc cgctttcgat ttcggcgacg agctcggccg
     1321 agcgttcggt cagctgcttc atggcgcgat cgaaggccgg gcgatcggcg ggcgcgacta
     1381 cttcggcaag gcggtccatg aacgcgtgcg cggtgggggc aagctcctcg tagacctcgc
     1441 ggccggctgg cgtcagcgac agaaaggact cccgcaaatc ggcgcgattg gcgcggcggc
     1501 tgagaaattt gcgctgctca agctgcgcca ccgcgcggga gaccttggtc ttgtgcatgt
     1561 gggtgtgggc gccgacagcc ttgcccgtca tgacgccgtt ctcgccgagc gtaacgagga
     1621 cgcgccactc gggtattcca ataccgtagc gcccatagac gcgcgtaagt gcctgtgaca
     1681 ccaggctcga cagcacgttg agccgatgcg gcagaaaatc ctcgagtttg agcagcggcg
     1741 cctcggcgca cgccgcatcg acatgcgccg cgttgtctcg aactggaccg gagttcgtca
     1801 tcacccgcgc ccatatgcgg cggtcggctt aaggcctgat cccgcgccga acattggcgg
     1861 aagattgccg tccgcgcaac gcaacgcagc cgcgtgctga ggcggtacac gttaagcttg
     1921 tacggttccc tgtaaagaac aggccggaaa caggggcgtc gcgctggcga ccgttttcta
     1981 cagccagagg ttggtccagc ctgcgcaggc gcggcgacgc ttccggcagg tccccgcaag
     2041 gtgcgtggcg cgtgccggcg ctggcgcacg caacaaaaag cccgggccac taccccgggc
     2101 tagcgcaatt tcggcgaata ctctttcctc gaagattctc gttacacgag tcaacaggaa
     2161 aatgcggcgg caacgggttg ccggctggag aagcgtgccc gcgcgtcgat ccgcggcggc
     2221 ctagcgcagg cactcgatgg cgacgaattc ctggcgcacc gaggtgccgg tggtcgcggg
     2281 ctcggagctc gcgatctccg cgcgctcgat ccggcgatac gacgcggcct gcatgtagtc
     2341 gcgggattgg cagtaggcgg tggcaaccgc cgcgccgcaa gtcgcgccgg tggcgagaca
     2401 acgatcgacg ccgtagccgt cggaattgtt ggcaatgatg aacgtacgct tttcggcctg
     2461 cgccgcggtg gcgaagacgc tacccgcgag cacgagcgcg gcgaacacat accgcatccc
     2521 tgacaccccc cttttccccg gttgcccagg gaccccgatc ctgcgtggaa aagcctaagg
     2581 cgtccctaac ctgaggcctt ccccgcggtt gcgatgtaac ggccttgccc cgtggttgcc
     2641 taggacatga aagccacact tcccggcgat cttggggcgg ccggaaaggc tttcaaaacc
     2701 tgagacttag gatgttggcc gccgcctgtt ggacggaccg gcggggcctt gacgcgcccc
     2761 gcgcgcttgc ccatgctccc ccgcgatgca cggccttaac cctatctgcg gcatttgccg
     2821 ggagattatc cgctagcgat ccacgctggc tgcggccgtc ttttctcctc acccgagatg
     2881 ttgggacgcc cggccagcga ggccgggagg cacctgttcc gcttcggccc ctctgcggtc
     2941 gaaagcgaaa caccacgatc gggcgagacg tcgagtgatg aaactgacgc tttacgacac
     3001 actgacgcgc gcgaagcggg cgttcacgcc gctcgaccct gcgcatgtgc gaatgtacgt
     3061 gtgcgggccg acggtctatg acttcgccca tatcggcaat gcgcgcccgg tcatcgtgtt
     3121 cgacgtgctg ttccgcctgc tccgccatgt ctacggggcc gagcacgtca tccacgtgcg
     3181 caacatcacc gac
//
LOCUS       DATCWM010000239         3712 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_261215, whole genome shotgun sequence.
ACCESSION   DATCWM010000239 DATCWM010000000
VERSION     DATCWM010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3712)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3712)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3712
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_261215"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..300)
                     /locus_tag="VIQ50_04625"
     CDS             complement(<1..300)
                     /locus_tag="VIQ50_04625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEY9359696.1"
                     /translation="MVKKIAIEEHCLFPGLQEYWEPTVTGLPTNKRQASLARLTDFGE
                     MRLEAMDKAGIERCVLSVAGPGVQAERDTKTACDKAREANDLLAREIDKRPKRYAG"
     gene            416..1258
                     /locus_tag="VIQ50_04630"
     CDS             416..1258
                     /locus_tag="VIQ50_04630"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009030984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEY9359697.1"
                     /translation="MAKKIRGVTFEENLSNSMGLEFYNLSHRFGYQSPNWPYFEDVKI
                     ERIHYHAKSGVLSQRITTSMHNTTHIDAPAHVVQGTPFIDEVPLPHFFGSGIVVSIPK
                     KKWESITYDDLEKAAGAAVRPRDVVIVNTGWHKLYDDNEDYFCRAPGFVSSAGEWFVE
                     KKVKVVGHDTQANDHPLATAIGPHRNGPLHPHLAEEYRKWSGGRDWKEDFPHWEPVHR
                     ILFKNGILGIENVGGDIDKVTGKRCTFALFPWNWERGDGCIIRLVAIVDPKGSYRIEK
                     GEKF"
     gene            1259..1600
                     /locus_tag="VIQ50_04635"
     CDS             1259..1600
                     /locus_tag="VIQ50_04635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009030983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY9359698.1"
                     /translation="MQVKHLSDAKSYEAPNHRGYCSLRLFGLDAGGPKQFTVGVSHFL
                     PGGGAGPDASPTEKVYYVLTGELTLIAGGNETVLKANDSCFIGPNERREIVNRGNDVV
                     TMLVAVSTPQQ"
     gene            1645..2448
                     /locus_tag="VIQ50_04640"
     CDS             1645..2448
                     /locus_tag="VIQ50_04640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009030982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY9359699.1"
                     /translation="MSEDFLKNPLSLFDIRGKIAIVTGATGAFGALAAKVLAGAGANV
                     VLCANSAGELQKVAAECEKLGGKAETVAKRPSSEANCDAIVEAAVKRFGRVDILVVAS
                     GQNKVSKIVDQKAEDFLDVMDANVTQTWLIARAAGRQMLKQGQGGKVILMSSARGLLG
                     HPAGYTAYCASKSAVDGITKALGCEWGDSGITVNALGPTVFRSPLTQWMFEDSERSRD
                     VRKGFLARVPKGRLGEPSDLAGPLLFLASKASDFYTGHVLYADGGYTAG"
     gene            2460..3365
                     /locus_tag="VIQ50_04645"
     CDS             2460..3365
                     /locus_tag="VIQ50_04645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006938830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /protein_id="HEY9359700.1"
                     /translation="MRIAVIGAGLMGHGIAQVFALAGHDVSIYDSIAASLDSAPSRIL
                     ANLRELGDDLSAVERVRPTADLAAAVADADYVVEAVLEDLPLKQKLFVEIERNVPPHT
                     ILASNTSVIPITRIMEGLRDRSRALGTHWWNPPYLVPLVEVIATQWTSQQAIDATIAL
                     HKAAGKMPVHVKKDVPGFVGNRLQHALWREAIALVERGVCDAETVDTVIKASFGRRLA
                     VLGPLENADLVGTDLTLAIHKTVLPDIDGRPHPSPYLEALVADGKLGCKSGEGFRAWT
                     AEAQAALRRNVLQHLKKARIADSNH"
     gene            3415..>3712
                     /locus_tag="VIQ50_04650"
     CDS             3415..>3712
                     /locus_tag="VIQ50_04650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359701.1"
                     /translation="MPKDSSRDPRFGISRRTLVRAGLGTIAAPAVLRVIPANAQSRVI
                     KIGHVSPKTGPLAGFGEADAFILEQVRGILAKGVQSGGRTYQVQIVSKDSQSSGS"
BASE COUNT          700 a         1179 c         1175 g          658 t
ORIGIN      
        1 gccggcgtag cgcttcgggc gcttgtcgat ctcgcgcgcc agcaaatcat tggcctcgcg
       61 cgccttgtcg caggcggtct tggtgtcgcg ttcggcctgc acgcccggtc ccgccacgga
      121 gagcacgcaa cgttcgatgc cggctttatc catggcctcg agccgcatct cgccgaaatc
      181 ggtgagacgc gcgagagacg cctggcgttt gttcgttgga agacctgtta ccgtcggctc
      241 ccaatattcc tgcaagccgg gaaacaaaca gtgctcctca atcgcaatct tcttgaccat
      301 tgttcctccc cgctgctttc gctaccgtat tctcgttgaa gcgcattgag aggcaaagtt
      361 caatcttgct gctgctcgag cgatatagtc gtgcgggtgg aggggaggag gtgccgtggc
      421 gaaaaaaatt cgcggcgtga cgttcgagga gaacttgtcc aacagcatgg gcctcgagtt
      481 ctacaatcta tcgcatcgtt tcggctatca atccccgaat tggccctatt tcgaagacgt
      541 caagatcgag cgcatccatt atcacgccaa gtccggtgtg ttatcgcagc gcatcaccac
      601 cagcatgcac aatacgacgc atatcgatgc gccggcgcac gtggtgcagg gtacgccgtt
      661 catcgacgag gtcccgctcc cgcatttttt cggctcgggc atcgtcgtct cgattccgaa
      721 gaagaaatgg gaatcgatca cctacgacga cctggaaaag gcggcgggtg cggcggtgcg
      781 cccgcgcgac gtcgtcatcg tcaataccgg ttggcataag ctctacgacg acaacgagga
      841 ctatttctgc cgcgcgcccg gcttcgtgtc ctcggccggc gagtggttcg tcgagaagaa
      901 ggtcaaggtc gtcggccacg acacgcaagc aaacgatcat ccgctcgcca ccgccatcgg
      961 cccgcaccgc aacggcccac tgcatccgca tcttgccgag gaatacagga agtggtcggg
     1021 tggccgcgac tggaaggagg actttccgca ctgggagccg gtccatcgca tcctgttcaa
     1081 gaacggcatt ctgggcatcg agaacgtcgg cggcgatatc gacaaggtca ccggcaagcg
     1141 ctgcaccttc gcgctgtttc cgtggaactg ggagcgcggc gacggctgca tcattcggct
     1201 ggtcgccatc gtcgacccca aaggctccta ccggatcgag aagggggaga aattctagat
     1261 gcaggtcaaa cacctcagcg acgccaagtc ttacgaggcg cccaaccacc gcggttattg
     1321 ctcgctgcgg ctgttcgggc tcgacgccgg cggaccgaaa caattcaccg tcggggtatc
     1381 gcatttcctg cccggcggcg gcgccggccc ggacgcctcg cccacggaaa aggtctatta
     1441 cgtgctcacg ggcgagctca cgctgatcgc gggcgggaac gagaccgtgc tcaaggccaa
     1501 cgactcctgc ttcatcgggc cgaatgaacg ccgcgagatc gtcaatcgcg gcaacgacgt
     1561 cgtgaccatg ctggtcgcag tatcgacgcc gcagcagtga tgccgatgga ggcaacaacg
     1621 atctcacgta aggacgcctc cgtcatgtcc gaggacttcc tgaaaaatcc gctctcgctg
     1681 ttcgacatcc gcggcaagat cgcgatcgtg acgggcgcca ccggcgcctt tggcgcgctc
     1741 gcggcgaagg tgctcgccgg cgccggcgcc aacgtcgtgc tctgcgccaa cagtgccggt
     1801 gaactgcaaa aagtggcggc ggaatgcgaa aagcttggcg gcaaggccga gaccgtggcc
     1861 aagcggccga gctcggaggc aaattgcgac gcgatcgtcg aggcggcggt caagcggttc
     1921 ggacgcgtcg atatcctcgt cgtcgcgtcg ggtcagaaca aggtctccaa gattgtcgac
     1981 cagaaggcgg aggattttct cgacgtcatg gacgccaacg tgacgcaaac ctggttaatc
     2041 gcgcgcgcgg ccggccgcca gatgctcaag caaggccaag gcggcaaggt catattgatg
     2101 tcgtcggcgc gcgggcttct cgggcacccc gccggataca ccgcctactg cgcctcgaaa
     2161 tccgccgtcg acggcatcac caaggcgctg ggctgcgaat ggggcgatag cggcatcacc
     2221 gtcaatgcgc tcgggccgac cgtgtttcgc tcgccgctga cgcaatggat gttcgaggac
     2281 agcgagcgct cgagggacgt gcgcaaaggc ttcttggcgc gcgttcccaa aggccggctc
     2341 ggcgagccgt cggatctcgc gggaccgctg ttgtttcttg catcaaaggc gtcggatttc
     2401 tacaccggtc acgtcctcta cgccgacggc ggctacaccg cagggtgagg atggcgaaga
     2461 tgcgcatcgc cgtcatcggc gcggggctca tgggtcacgg catcgcccag gtgttcgcgc
     2521 tcgccggcca tgacgtctcc atctacgatt cgatcgccgc aagcctcgac agcgccccgt
     2581 cgcgcattct cgccaatctc agggaactcg gcgacgacct ctccgcggtc gagcgcgtgc
     2641 ggccgaccgc cgatctcgcc gctgccgtcg ccgacgcgga ctatgtggtc gaggccgtcc
     2701 ttgaagattt accgctcaag cagaagctgt tcgtcgagat cgaaagaaac gtgccgccgc
     2761 acacgatcct cgccagcaac acctcggtca ttccgatcac ccggatcatg gagggtttgc
     2821 gcgaccgctc gcgcgcgctc ggcacccatt ggtggaatcc gccatacctc gtgccgttgg
     2881 tagaggtgat cgcaacgcag tggacgtcgc agcaggcgat cgacgcgacg atcgctctgc
     2941 acaaagccgc gggcaagatg cccgtgcacg tgaagaagga tgtccccggc ttcgtcggca
     3001 accggctgca gcacgccttg tggcgggagg cgatcgcgct ggtcgaacgc ggggtttgcg
     3061 acgccgagac ggtcgatacc gtgatcaagg cgagcttcgg ccgccggctc gccgtcttgg
     3121 gtccgcttga aaacgccgat ctcgtgggca ccgatttgac gctggcgatt cacaagaccg
     3181 ttctgcccga catcgatgga cggccgcatc cgtcgcccta tctcgaggca ctggtggcgg
     3241 acggcaagct tggctgcaaa tcgggcgagg gctttcgcgc atggactgcc gaggcgcagg
     3301 ccgcgctgcg ccggaacgtg ctgcagcatc tcaagaaggc gcgcatcgcc gatagcaatc
     3361 actgaccgtc atggccgggc atgacgagtg agaacgacgg aacgggaggc tcacatgccc
     3421 aaggattcct cgcgcgatcc caggttcggc atttcgcgcc ggacgctcgt ccgcgctggg
     3481 ctcggcacaa ttgccgcacc ggcggtgctg cgggtcattc ccgccaacgc ccagagccgg
     3541 gtcatcaaga tcggccacgt cagcccgaag acgggtccgc tcgccggctt cggcgaggct
     3601 gacgctttca tcctcgagca ggtccgcggc attttggcga agggcgtgca aagcggcggt
     3661 cgcacgtacc aggtccaaat tgtcagcaag gacagccagt cgagcggcag cc
//
LOCUS       DATCWM010000240         3829 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_104606, whole genome shotgun sequence.
ACCESSION   DATCWM010000240 DATCWM010000000
VERSION     DATCWM010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3829)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3829)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3829
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104606"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..731
                     /locus_tag="VIQ50_04655"
     CDS             <1..731
                     /locus_tag="VIQ50_04655"
                     /inference="COORDINATES: protein motif:HMM:NF019474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase fold domain-containing
                     protein"
                     /protein_id="HEY9359702.1"
                     /translation="HGGGWQAGARSAFQYWGPYLAARGYVLFAVSYRLAKKGHKAFPQ
                     AVTDLLAAVQFVRGSATQIKVDPERIGLFGASAGAHLAALAALGAESAPFKDAYPNNP
                     HASLSSKVKAFIGVYGVYDVVEMWQRYLLQSPRENNIENFMGCAPMDDPRRYFEASPV
                     NYATFANNQIGVFLSVGTEDDLVNRRAQTDAFLLKLKQANFFVRTCIAQGAPHYWLND
                     PIEEPGSYSGFMAPRLLRFLQERL"
     gene            complement(803..1654)
                     /locus_tag="VIQ50_04660"
     CDS             complement(803..1654)
                     /locus_tag="VIQ50_04660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1932 domain-containing protein"
                     /protein_id="HEY9359703.1"
                     /translation="MHPLVAVIAPGMMGAAVGKRLVDHGLKVLTSLTGRSAETSERAK
                     AAGMVAATDEEIAATDFILSILPPGDAVALAQRFAPALSASNSKPVYVDCNAVSPRTA
                     EHIAAAIAPTGSPFVDAGIIGPPPKGTDAGPRFYASGPDAPRFAALKDFGLDVRVLGG
                     PLSAASALKMSYAGITKGTQALGAVMMLAATRGGTADALSAELQASQPQMLAWLKRSL
                     ALMPPKAYRWVAEMHEIADFVGEDPAGHELYLGAAHFYEQIACDFEDERNEVSALKAF
                     LGKGAGS"
     gene            1768..2685
                     /locus_tag="VIQ50_04665"
     CDS             1768..2685
                     /locus_tag="VIQ50_04665"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEY9359704.1"
                     /translation="MRARLGNSGYFRFAPVSSIASVPEQEAVPDNLSDARYEVALANR
                     MLANEGVLDAFGHVSLRHPADPSRYLLSRSRSPGLIEPDDVLEFTLDSEPVAPPSVHL
                     YAERVIHGCIYQARPDVTAVCHHHAPAVMPFCIAGVAIVPVFHLGAAGGETLPFWNQR
                     DEFGDTNLLVVKPEEGRSLARALGSRAAVLMNNHGATVVGRDLRELVSRSIFMCQNAD
                     YQLRAQLLGKVATLTAGETKLAGTLNAMPNVTNRTWEYWTLRLARTGGLPPRASVSKA
                     RPQAASKARTSSPRTPTRDQGVRKNRRRR"
     gene            2682..3671
                     /locus_tag="VIQ50_04670"
     CDS             2682..3671
                     /locus_tag="VIQ50_04670"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359705.1"
                     /translation="MKFNFASNAVSGCLGLTLVVLAASGFSAAARAEDQLKVAIGQIN
                     NWENQAPTLGQDAGIFKRHNLVLENVGTQGAGETMQPVIAGSADLGAGVGVAGVLRAF
                     ARGAPVRILLPAFTGTGDLYWYVKADSPLKTIKDITANNTIAYSTSGSSSNNLVLAFA
                     DELGVKAKPTATGGPAGTLTQVMSGQIDIGWAAPPFGMKELKEGNIRILIRGSEAPSL
                     RGQTVRTIIVNADALKSKRDAIMRFVQGYRDAVDWMYADPRAIDMYAEKMHLDRNLIA
                     DSIKEFHSKEALQTDEMKDIAGIQRDAVKLKFIDAPLSKEQLAELIQIPPRNK"
     gene            complement(3701..>3829)
                     /locus_tag="VIQ50_04675"
     CDS             complement(3701..>3829)
                     /locus_tag="VIQ50_04675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA
                     isomerase"
                     /protein_id="HEY9359706.1"
                     /translation="LDTQLDLEREAQREASLSPDYAEGVQAFLQKRPPVFAGRRAS"
BASE COUNT          687 a         1238 c         1223 g          681 t
ORIGIN      
        1 cccacggcgg cgggtggcag gcgggggcgc gcagtgcctt tcagtactgg ggcccctatc
       61 ttgccgcgcg cggctatgtc ctgttcgcgg tcagctaccg tctggcgaag aaggggcata
      121 aggcgtttcc gcaggcggtc accgacctgc tcgcggcggt gcaattcgtg cgtggcagcg
      181 cgacgcagat caaagtcgat cccgagcgca tcgggctgtt cggcgcttcc gcgggcgcgc
      241 atcttgccgc gctcgcggcg ctcggtgcgg aaagcgcgcc gttcaaagat gcctatccca
      301 ataatcctca cgcctcgctc agcagcaagg tgaaggcatt catcggcgtc tacggcgtct
      361 acgatgtcgt cgagatgtgg cagcgttacc tgctgcagag cccgcgcgag aacaacatcg
      421 agaatttcat gggctgcgcg ccgatggacg atccgcgccg ctatttcgag gcgtcgcccg
      481 tgaactatgc gaccttcgcc aacaatcaga tcggcgtttt cctaagcgtg gggaccgagg
      541 acgatctcgt caaccggcgg gcgcagacgg acgcgttcct gctcaagctc aagcaagcca
      601 acttcttcgt gcgcacgtgc atcgcgcaag gcgcgccgca ctattggctc aatgacccga
      661 tcgaggagcc gggcagctat tcgggcttca tggcgccgcg cttgttgcgc ttcttgcagg
      721 agcggctgtg aggccgagca acctaaacac gtcgttccag cgagcttgca ccggtcgagg
      781 cgctgattga gagcggcagg cgctagctcc ccgcgccttt ccccaagaac gctttgagcg
      841 ccgaaacctc gttccgttcg tcctcgaaat cgcaggcgat ctgttcgtag aaatgcgccg
      901 cgccgagata gagctcgtgc cccgcagggt cttctccgac aaaatcagcg atctcgtgca
      961 tttccgccac ccagcggtaa gccttcggcg gcattaatgc caaactgcgc ttgagccacg
     1021 ccagcatctg cggctggctt gcttgcaact cggcggagag cgcatccgcc gtcccgccgc
     1081 gcgtcgccgc cagcatcatg accgcgccca aggcctgggt gcccttggtg ataccggcat
     1141 aggacatttt cagcgccgaa gccgcgctca gcggaccgcc caggacgcgc acgtcgagcc
     1201 cgaaatcttt cagcgcggca aagcgcggcg cgtccgggcc ggaggcatag aagcgcgggc
     1261 cggcgtcggt tcctttcggc ggcgggccga taatgccggc atcgacgaag ggcgaacccg
     1321 tcggcgcgat cgcggcggcg atgtgctcgg cggtacgcgg gctcacggcg ttgcagtcga
     1381 catagaccgg cttgctgttg ctggcgctga gcgccggcgc aaaccgctgc gccagcgcga
     1441 cggcgtcgcc cggcggcaag atggacaaga tgaaatcagt cgcggcgatc tcctcgtcgg
     1501 ttgccgcgac catcccggcg gccttggcgc gctcgctcgt ctcggcgctg cgccccgtga
     1561 gcgaggtcag caccttgagg ccgtgatcga ccagccgctt tccgaccgct gcgcccatca
     1621 tgcccggcgc gatcacggcg acgagaggat gcatggatcg tcctccgttt atccccgctg
     1681 cacggcaaat ctgctgggat cgaaccgtct tggcaagacg tctttctctc gccttacgtc
     1741 gtcgcgtgag cgtatagagg gcgagatttg cgtgcgcggc ttggcaacag cggctatttc
     1801 cgctttgctc cggtatcatc gatcgcgtct gttccagagc aggaagccgt gcccgacaac
     1861 ttgtccgacg cccgttatga agtcgccttg gccaatcgga tgttggccaa cgaaggcgtg
     1921 ctcgatgcgt tcgggcatgt gagtctgcgc catccggccg atccgagccg ctacctcctc
     1981 tcgcgctccc ggtcgccggg gctgatcgag ccggatgatg ttctcgaatt taccctcgat
     2041 tccgaaccgg tcgcgccgcc gtccgtccat ctctacgcgg agcgcgtcat ccacggctgt
     2101 atctatcagg cgcgacctga cgtgacggcg gtgtgtcatc accacgctcc ggcagtgatg
     2161 ccgttctgca ttgccggcgt cgccatcgtt ccagtctttc atcttggggc tgcgggaggt
     2221 gaaacgctgc cgttctggaa ccagcgcgac gagttcggcg acacgaatct gctggtggtc
     2281 aagccggagg agggccgctc gctcgctcgc gcgctcggat cgcgcgccgc ggtgctcatg
     2341 aataaccacg gcgcgaccgt ggtcgggcgc gacctgcgcg agttggtgtc ccgctcgatc
     2401 ttcatgtgtc agaacgccga ctatcagctg cgtgcgcagc tcctcggcaa ggtcgcgact
     2461 ctcaccgccg gcgaaacgaa gctcgccggc acgctcaatg ccatgcccaa cgtgaccaac
     2521 cgcacctggg aatactggac gctgcgcctg gcgcgaacgg gcggacttcc gccgcgcgcc
     2581 agcgtttcca aggcgcggcc gcaggccgca tcgaaggcgc gcacgagttc gcctagaacg
     2641 ccgacgcgag atcagggggt gcgcaagaac aggaggagga gatgaagttc aacttcgcga
     2701 gcaacgcggt gagcggttgc ctcggcctta cgctcgtcgt gctcgcggcg agcggcttca
     2761 gcgcggccgc gcgcgccgaa gaccagctca aggtcgcgat cggacagatc aacaattggg
     2821 aaaaccaggc gcccacgctt ggccaagatg cgggaatctt caagcgtcac aacctcgtgc
     2881 tcgagaacgt cggcacgcag ggggccgggg agacgatgca gcccgtcatc gccggtagcg
     2941 ccgatctcgg cgccggcgtc ggtgttgccg gggtcctgcg cgctttcgcc aggggtgcgc
     3001 cggtgcgcat tctgctaccg gcgtttacgg ggacaggaga cctttattgg tacgtgaaag
     3061 ccgattcacc gctcaaaacc attaaagata ttaccgccaa caatacgatt gcctattcca
     3121 cgagcgggtc gagttccaac aacctggtcc tcgcattcgc ggacgagctc ggcgtcaaag
     3181 ccaagccgac cgcgaccggc ggccccgccg gcacgctgac ccaggtcatg tccggtcaga
     3241 tcgacattgg atgggccgcc ccgccgttcg ggatgaagga actcaaggag ggaaacatcc
     3301 gcatcttgat ccgcggcagc gaagcccctt cgctgcgcgg ccaaaccgtg cgcacgatca
     3361 tcgtcaatgc ggacgccttg aagtcaaaac gggacgcgat catgcgtttc gtccagggct
     3421 atcgcgacgc ggtcgactgg atgtacgcgg atcccagggc gatcgacatg tatgccgaga
     3481 aaatgcacct cgatcggaat ttgatcgcag actcgatcaa ggagtttcat tccaaggagg
     3541 ccctgcagac ggacgagatg aaggacatcg cgggaatcca gagagacgca gtcaagctca
     3601 aattcattga cgcgccgttg agcaaggagc aactcgccga gctcatccag atcccgccgc
     3661 gtaacaagta attgccggcc cgcgacttga accgcgcatc ctaggacgcc ctgcgtccgg
     3721 cgaagaccgg cgggcgtttt tgcaggaacg cttgcacgcc ttcggcatag tcgggcgaaa
     3781 ggctcgcctc gcgctgcgcc tcgcgctcga ggtcgagttg cgtgtcaag
//
LOCUS       DATCWM010000241         2607 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_325990, whole genome shotgun sequence.
ACCESSION   DATCWM010000241 DATCWM010000000
VERSION     DATCWM010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2607
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_325990"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1636)
                     /locus_tag="VIQ50_04680"
     CDS             complement(<1..1636)
                     /locus_tag="VIQ50_04680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEY9359707.1"
                     /translation="MHESAADRPAPARDPWRRRLVASLLYGRNVDRAAKTRGRIALAV
                     FIFALGYAVIAARLVMFAAAPDGHGSRRAIAQDAVATARPDILDRNGEILATDVRTPS
                     LFAEPHRIIDVDEASELLTAVMPDIDAAELRGRLASKRRFVWLKREITAEQRAQIHRL
                     GIPGIGFLPENKRIYPNGPEVSHVLGHVNIDNQGTAGIEKWLDARGLADLHLAGLATD
                     RLQTPIELAVDLRVQHALRDELIAARAKFKAVAAAGVLTDVRTGEIVSMVSEPDYDPN
                     NPREALDPTRINRLTTGVYEMGSTFKALTLAMALDSGKITLKSAFDASHPLQYGKFAI
                     HDFHAQNRVLTVPEIFTYSSNIGTARMALSLGIEHHKWFLRKTGQLERLRTELPESAE
                     PLVPKRWAELNTVTIAFGHGLSVAPLQAVMAISALMNGGHLIPPTFLKRSESEALALA
                     TQVVKPETSEKMRYLMRLNVEKGTATKADVKGYYVGGKTGTADKVVGGRYSKTKVLTS
                     FTAVLPADQPRYLLLIMLDEPQATPDTHGFTTSGWNA"
     gene            complement(1642..2022)
                     /locus_tag="VIQ50_04685"
     CDS             complement(1642..2022)
                     /locus_tag="VIQ50_04685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359708.1"
                     /translation="MRVLNICVIGALVLAAADVYTIKFESTRQAQRVAKLRLEIRRER
                     DAVASLRAEWAKLDNPARIQALARRHLQLGPLEARQADPLDNLPERPADLVAVEEADP
                     IAAVIANPGALDRPAAGNVPTATR"
     gene            complement(2022..>2607)
                     /gene="rsmH"
                     /locus_tag="VIQ50_04690"
     CDS             complement(2022..>2607)
                     /gene="rsmH"
                     /locus_tag="VIQ50_04690"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HEY9359709.1"
                     /translation="ELAAIFATLGEERHARRIARAIVAARRQAPIHTTRSLADIITGI
                     VHARPGAIHPATRTFQALRIFVNEELAELAAGLAAAERVLKPRGRLVVLAFHSLEDRM
                     VKSFLVERSRPGTPSRHHPAPVQAAMTFDVLTKRPIVPSDAEISANPRARSARLRAAE
                     RTEAAIAVRAVASLLPRLPLLAEFAAREGRGRQP"
BASE COUNT          419 a          834 c          908 g          446 t
ORIGIN      
        1 ccgcattcca tcccgacgtg gtgaagccgt gcgtgtcggg ggtcgcttgc ggctcatcca
       61 gcataatgag caagaggtag cgcggctggt cggccggcag caccgcggtg aacgaggtga
      121 gcaccttggt tttggaataa cggccgccga ccaccttgtc cgcggtgccg gtcttgccgc
      181 cgacgtaata gcccttcacg tcggctttgg tagcggtgcc cttctcgacg ttgaggcgca
      241 tcagatagcg catcttctcg ctcgtctcgg gcttgacgac ctgcgtggcg agcgccagcg
      301 cctcgctctc gctgcgcttg aggaaggtgg gcggaatgag atgcccaccg ttcatcagcg
      361 cgctgatcgc catcaccgct tgcagcggcg cgacggaaag cccgtggccg aatgcgatcg
      421 tcaccgtgtt gagctcggcc cagcgcttgg gcacgagcgg ctcggcgctt tccggcaatt
      481 cggtgcgcag ccgctcgagc tggcccgtct tccgcaagaa ccatttgtgg tgctcgattc
      541 ccaggctcag cgccatgcgg gcggtgccga tattggagga gtaggtgaag atctcgggga
      601 ccgtgagcac acggttctgc gcgtggaaat cgtggattgc gaacttgccg tattgaagcg
      661 gatggctggc atcgaaggcg gacttgagcg tgatcttgcc ggagtcgagc gccattgcga
      721 gggtgagcgc cttgaaggtc gatcccatct cgtacacacc ggtggtgagc cggttgatgc
      781 gggtcggatc gagcgcctcg cgcggattgt ttgggtcgta atcgggctcc gagaccatcg
      841 agacgatctc gccagtgcgc acatcggtca agacgcccgc ggccgccacc gccttgaact
      901 tggcgcgggc ggcgatcagt tcgtcgcgca gcgcgtgctg cacgcgcagg tcgaccgcga
      961 gctcgattgg cgtttgcagc cggtccgtgg caagccctgc cagatgcaag tcggcaagcc
     1021 cacgcgcgtc gagccatttc tcgatgccgg cggtgccctg attgtcgatg ttgacgtggc
     1081 cgaggacgtg ggaaacctcg gggccgttcg gatagatgcg cttgttctcc ggcaggaaac
     1141 caatgccggg aattccgagt cgatggatct gtgcgcgctg ctctgcagta atctcgcgct
     1201 tgagccagac gaagcggcgc ttggacgcga gccgaccgcg cagttcggcg gcatcgatgt
     1261 ccggcatcac cgccgtgagc agttcggacg cctcgtcgac gtcgatgatc cggtgcggct
     1321 cggcgaacaa cgatggcgtg cgcacgtcgg tcgccagaat ttctccgttg cggtcgagga
     1381 tgtcgggccg cgcggtcgcc accgcatcct gggcgatggc gcgccgtgac ccgtgcccgt
     1441 cgggcgcggc cgcgaacatc accaaccggg ccgcaatcac ggcatagcca agcgcgaaga
     1501 tgaacacggc gagagcgatg cgcccccgcg tcttggcggc gcgatcgacg ttgcggccat
     1561 aaagcagcga ggcgacgagg cgacggcgcc acgggtcgcg cgcaggtgcc ggccgatctg
     1621 ccgcggattc gtgcatggcc atcatcttgt cgccgtgggc acgttgccgg ccgctggacg
     1681 atccaaagcc ccgggattcg cgatcaccgc cgctatcggg tcggcctcct ccacggcaac
     1741 gagatcagcc ggccgctcgg gcagattgtc gagcggatcg gcttgccgcg cctcgagcgg
     1801 ccccagctgc agatgtcggc gcgccagagc ctgaatgcgt gccggattgt cgagcttggc
     1861 ccattccgcg cgcagcgacg ccaccgcatc gcgctcgcgc ctaatctcga ggcgcagctt
     1921 tgcgacgcgc tgcgcttgcc gcgtcgactc gaacttgatc gtgtagacat cggccgccgc
     1981 cagcacgagc gccccgatca cgcagatatt gagcacgcgc atcatggctg tcgccccctt
     2041 ccctcgcggg cggcgaactc ggccaacaag ggcaaccgcg gaagcaacga cgcgacggcg
     2101 cggacggcaa tggctgcctc ggtgcgctcg gcggcgcgca gcctggcgga gcgcgcgcgg
     2161 ggattggcgc tgatctccgc atcgctcggc acgatcgggc gcttggtcag gacgtcgaaa
     2221 gtcatggccg cctgcaccgg cgccggatga tggcgcgagg gagtgccggg ccggctgcgc
     2281 tcgaccagaa atgatttgac catccgatct tcgagcgaat ggaacgccag cactaccaat
     2341 cgtccgcgtg gcttgagcac ccgctccgcc gcggcgagac cggcggcaag ctcggcaagc
     2401 tcttcgttga cgaagatgcg cagcgcttgg aacgtccggg tcgccggatg gatcgcgccc
     2461 gggcgcgcat gcacgatgcc ggtgatgatg tcggcgagag agcgggtggt gtggatcggc
     2521 gcttgccggc gcgcggcgac gatagcgcga gcaatcctgc gcgcatggcg ctcttcgccc
     2581 agcgtcgcga aaatggccgc aagctcg
//
LOCUS       DATCWM010000242         3587 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_520317, whole genome shotgun sequence.
ACCESSION   DATCWM010000242 DATCWM010000000
VERSION     DATCWM010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3587
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_520317"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(385..1854)
                     /locus_tag="VIQ50_04695"
     CDS             complement(385..1854)
                     /locus_tag="VIQ50_04695"
                     /EC_number="1.11.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003597278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004096 - catalase activity [Evidence
                     IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HEY9359710.1"
                     /translation="MNDDIRKPTTTDAGIPVPSDEFSLTVGSDGPILLQDHYLIEQMA
                     NFNRERIPERQPHAKGGGAFGRFEVTKDVSKYTKAAVFQPGTKTDMLVRFSTVAGERG
                     SPDTWRDPRGFALKFYTSQGNYDMVGNNTPVFFVRDPMKFQHFIRSQKRRADTNLRDH
                     DMQWDFWTLSPESAHQVTILMGDRGIPKDWRHMNGYSSHTYLWVNAKGQKFWVKYHFK
                     TDQGIDFLTQAEADRLAGVDGDYHTRDLYEAIERGDHPSWTLHMQIMPFDEAKTYRFN
                     PFDLTKVWPHGDYPLVEVGRMTLDRNPTDYHTEIEQAAFEPNNLVPGIGPSPDKMLLA
                     RLFSYADAHRARMGVNYKQIPVNRPQVPVHSYSKDGLMRVENVADPVYAPNSKGGPKA
                     DPTQYPQLEVWEASGEFVHAAYTKRKDDDDFGQAGTLVRKVMDNAQRDRLVSNVVGHL
                     KDGVTEPVLARAIEYWRKVDQAVGDRIAKGVQGERMAAE"
     gene            complement(2065..>3587)
                     /locus_tag="VIQ50_04700"
     CDS             complement(2065..>3587)
                     /locus_tag="VIQ50_04700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015687166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359711.1"
                     /translation="AQRGAARALRFVPQADLANFDPIWNTQYVVRNAAALVWDMLYGF
                     DDKLQPRRQMVESEEVSSDGRVWTFRLRPGLKFHDGERVLATDVVASLKRWQARDNMG
                     LMLRDIQDELVAVDDSTFRWVLKNPYPKLLIALGKVGTPSCFIMPARIAATDPFKPIS
                     EYVGSGPMRFVREEWVPGARAVFERFADYAPRPEPAAWLSGGKRVLLDRIEWVTMADP
                     ATASAALQNGEVDWWETPIADLVPLLRKNRNLAVDIADPLGNIGSFRMNHLHPPFNDV
                     RARRAILTAMSQEDYMRAVVGDDTLWKPLPGFFTPGTPLYSEEGGDILKGPRRLDAAK
                     RLLAQSGYSGEPVTCVVAQDLQITKAQGEVTADLLKKIGMNVDFAAVDWGTNAARRAQ
                     KTPPGQGGWQMFHTWHAGAVCIDPSSYTAIRANGDKAWFGWPTSAKVEAEITSWYEAP
                     NLEEEKAAIARVNKAALEDVVYAPTGFFLAHQAWRSQVNGITKGPLPFFWGVSKAA"
BASE COUNT          620 a         1130 c         1108 g          729 t
ORIGIN      
        1 cgcagatcaa ccaattgaat cagtcttttc ccttcaacgc gggcctgggg aataatccca
       61 ccaaccgcga tgcctacatc cgctacaacc tcaccaggta gcgctagacc aacctcccag
      121 cgagtagccg tgtcaccgca aggacgctcg gtctgaccgt gccgtccgcg cgacgcaccg
      181 gcgcggacga ggtgattcga gtgccgaagc tgcttgcggc ggtgcgtcag ggacgcgatt
      241 ggccgaacgc cgacgtccct cgccgagttg catctggcgt aacctcagcg cattccttgc
      301 tgttgagtcg ctccggacct tgatccgggg ggttcttttc aaacagtcga tccctgacga
      361 agagtcgatc gcggctgcac gccactactc cgcggccatc cgttctcctt ggacgccctt
      421 ggcaatacgg tcgccgaccg cttggtcgac cttgcgccaa tactcgatcg cgcgcgccag
      481 cacgggctcg gtcactccgt ccttgagatg gccgacgacg ttggacacca gccggtcgcg
      541 ttgagcgttg tccatgacct tgcgcaccag cgtgccggcc tgaccgaagt catcgtcgtc
      601 cttccgcttc gtgtaagcgg cgtggacgaa ctctccgctg gcctcccaca cttcgagctg
      661 aggatactgt gtgggatcgg cctttggtcc gcctttggag ttcggcgcgt acaccgggtc
      721 ggccacgttc tcgacccgca tcaatccgtc cttgctatag ctatgcaccg gcacctgggg
      781 tcgattgacc gggatctgct tgtagttcac gcccatgcgg gcgcgatgcg cgtcggcata
      841 ggaaaaaagc cgcgccagca acattttgtc gggactgggc ccgatccccg gcacgaggtt
      901 attgggctcg aaggccgcct gctcgatctc ggtgtgatag tcggtcggat tgcggtcgag
      961 cgtcatgcgg ccgacctcga ccagcggata gtctccgtgc ggccaaacct tggtcaggtc
     1021 gaacgggtta aagcgatagg tcttggcctc gtcgaacggc atgatctgca tatgcagggt
     1081 ccagctcggg tggtctccgc gctcgatcgc ttcgtaaaga tcgcgagtgt ggtagtcgcc
     1141 gtcgacaccg gccagccggt ccgcctccgc ctgggtcagg aaatcgatcc cctggtcggt
     1201 cttgaaatgg tatttcaccc aaaatttctg acccttggcg ttgacccaca agtaggtgtg
     1261 gctggaatag ccgttcatgt gccgccaatc cttgggaatg ccgcggtccc ccatcaggat
     1321 ggtcacttgg tgggccgatt ccggggacag cgtccagaag tcccactgca tgtcatggtc
     1381 gcgcagattg gtatccgcgc gacgcttctg cgagcggatg aagtgctgaa atttcatcgg
     1441 gtcgcgcacg aagaacaccg gcgtgttgtt cccgaccatg tcgtagttgc cttgactggt
     1501 gtaaaacttc aacgcgaatc cccgcgggtc acgccacgtg tctggactgc cgcgctcgcc
     1561 ggcgacggtt gaaaaacgca ctagcatgtc ggtcttggtg cccggctgga acaccgcggc
     1621 tttggtatat ttgctgacgt ccttcgtcac ctcgaaacgc ccgaaggcgc cgcctccttt
     1681 ggcatgcggc tgacgttcgg ggatccgctc ccggttgaag ttcgccatct gctcgatgag
     1741 atagtgatcc tgcagcaata ttggaccgtc ggatccgacg gtgagcgaga actcgtcgct
     1801 ggggactgga atcccagcat cggttgtggt gggtttgcgg atgtcgtcat tcatgatagc
     1861 gcctccgtcg tgtagcccgc gtgccagtgt ctccgcgagc cgtcagttgc cggattgatg
     1921 gcggtcaggc gtggcaaact ccttagcttg ctctcctaga gccgctgact cgatggtaga
     1981 tgcgcttcac gcccgtggac gcttgccgca acttgctttc gtttgcgatt tcttgcgcaa
     2041 atcagggcgc cgagccgcag gcgttcacgc cgccttgctc acaccccaga agaacggcag
     2101 cgggcccttc gtgatgccgt tgacttggct gcgccacgcc tggtgggcga ggaaaaatcc
     2161 ggtcggcgca tagacgacgt cctcgagcgc ggccttgttg actcgggcga tcgcggcttt
     2221 ttcctcctcg agatttggtg cctcgtacca gcttgtgatc tccgcttcga ccttggcact
     2281 ggtcggccag ccgaaccacg ccttgtcacc gttggcgcgg atcgcggtat atgacgaagg
     2341 atcgatacag accgcgccgg cgtgccaggt atggaacatc tgccagccgc cctggccggg
     2401 cggagttttt tgcgcccggc gcgccgcgtt ggtcccccag tcgacggcgg caaaatcgac
     2461 gttcatgccg atcttcttga gcaggtcggc ggtcacctct ccctgcgcct tggtaatttg
     2521 cagatcctgc gccaccacac aggtgacggg ctcgccggaa tagccgctct gcgcgagcaa
     2581 tcgtttggcg gcgtcgagac ggcgcggacc cttgagaatg tcgccgcctt cctcgctgta
     2641 gagcggcgtg cctggcgtga aaaagcccgg cagcggtttc cacaacgtgt catcgcccac
     2701 gacggcgcgc atatagtctt cctggctcat tgcggtcagg atcgcccggc gcgcgcgcac
     2761 gtcattaaaa ggcggatgca gatgattcat acggaagctg ccgatattgc cgagcggatc
     2821 ggcaatatcg acggcgagat tgcgattctt gcgtaagagc ggcacgagat cggcgatcgg
     2881 cgtttcccac cagtccactt cgccgttctg aagcgcggcc gatgccgtgg cgggatccgc
     2941 catcgtgacc cattcgatgc ggtcgaggag cacgcgcttg ccaccggaga gccacgcggc
     3001 tggctccggg cgcggcgcgt aatcggcgaa gcgctcgaat accgcgcgcg cgccgggaac
     3061 ccattcctcg cgcacgaagc gcatcggccc gctgccgaca tactcgctga tcggcttgaa
     3121 cggatcggtc gccgcaatcc gcgccggcat gatgaagcat gagggcgtgc cgaccttgcc
     3181 gagcgcgatc aacagtttcg gataggggtt tttgagcacc cagcggaagg tgctgtcgtc
     3241 gacagcaaca agctcgtcct ggatgtctcg aagcatcaag cccatgttgt cgcgggcctg
     3301 ccatcgcttg aggcttgcca cgacgtcggt cgcaagcacc cgctcgccgt cgtgaaactt
     3361 gagaccaggc cgcaagcgga acgtccaaac gcgtccgtcc gacgacacct cttcactctc
     3421 gaccatctgg cgccggggct gaagcttgtc gtcgaaaccg tagagcatgt cccacaccag
     3481 cgcggcagcg ttgcgcacga cgtactgggt gttccagatg ggatcgaaat tggcgagatc
     3541 ggcctgcggc acgaagcgca acgcgcgcgc ggcaccgcgc tgcgcga
//
LOCUS       DATCWM010000243         2689 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_66850, whole genome shotgun sequence.
ACCESSION   DATCWM010000243 DATCWM010000000
VERSION     DATCWM010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2689
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66850"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..443
                     /locus_tag="VIQ50_04705"
     CDS             <1..443
                     /locus_tag="VIQ50_04705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011504458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9359712.1"
                     /translation="DGYSAAASKEAFFEQCDILSLHMRLVDATRGIVTAADLARMKPT
                     ALLVNTSRAPLIAPGALVNALRAGRPGLAAVDVYEEEPVRDPAHPLLNMDNVVCTPHI
                     GYVSRDEYEIQFAEIFDQIIAYAAGSPMNVVNPEALAIVAKRGT"
     gene            complement(500..1867)
                     /gene="der"
                     /locus_tag="VIQ50_04710"
     CDS             complement(500..1867)
                     /gene="der"
                     /locus_tag="VIQ50_04710"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HEY9359713.1"
                     /translation="MTFTVAIVGRPNVGKSTLFNRLVGKRVALVDDLPGVTRDRREAQ
                     ARLGDLTFVAIDTAGLEEARPESLTARMQEQTGAAIAAADAVMFLIDARAGATPADRA
                     FANLVRKSGKPAIVIANKSEGRAAEAGLLEAYELGLGEPIAISAEHGEGLADLYAALR
                     EALPEATAPATAAGEVDAPDADRKPIRIAVVGRPNSGKSTLVNRLLGEERLLTGPEAG
                     ITRDAIAVDLMWRDQRFRVHDTAGLRRRARIEGKLEKLSVADALNAVRFAEVVVLLMD
                     AQKPFEEQDLRIADLIEREGRALVIGMNKWDLVERRPGAIKNLREEVDHRLPQVKGVP
                     VAAVSGLTGEGLDRLMQAVIAAHATWNRRVGTSALNRWLGEVVSSHPPPVVAGRPIRL
                     DYITQQKSRPPSFVLFTSRADALPDAYRRYLVNSLRETFDLPGTPIRLALREKKNPYA
                     KRGKR"
     gene            complement(1926..2480)
                     /locus_tag="VIQ50_04715"
     CDS             complement(1926..2480)
                     /locus_tag="VIQ50_04715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359714.1"
                     /translation="MSRLARIGFTVLTLSLGLALAGCEGFDPTSIVDTDFFNTKKRLP
                     GERKAVFPEGTPGVPQGVPKELVKGNPGIEQAEQTEQAQPTAQAAPAEPKAESKPKPK
                     PKPKIVAKPQEDKPQEESRPTAVTVRPAQTQPAAQTQPAPAQSQVQWPDPPPMQQQPA
                     AGAWPGSAQGRSGGVAWPDPPAPR"
     gene            complement(2491..>2689)
                     /locus_tag="VIQ50_04720"
     CDS             complement(2491..>2689)
                     /locus_tag="VIQ50_04720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359715.1"
                     /translation="EPLAANDRTFRHTAREFLVLAAWRAGDTAAAKRWFDMVMTDAQT
                     PAGTRSRVEMLMALGAGASKS"
BASE COUNT          424 a          884 c          887 g          494 t
ORIGIN      
        1 ccgatggtta ctcggccgca gctagcaagg aggcgttttt cgaacaatgc gacatcctct
       61 cgctccacat gcgcctcgtc gacgccacgc gtggcatcgt cactgcggcc gatctcgcgc
      121 gcatgaagcc aactgcattg ctggtcaaca ccagccgcgc gccgctgatc gcgcccggcg
      181 ccttggtgaa tgcgttgcgt gcgggacgtc ccggcctggc ggcggtggac gtctatgaag
      241 aggaacccgt gcgcgacccg gcccacccgt tgctgaacat ggacaacgtc gtctgcacac
      301 cgcacatcgg ctatgtgtct cgtgacgagt acgaaattca gttcgccgag atcttcgacc
      361 aaatcatcgc atacgccgcg ggttcgccaa tgaatgtcgt caatccggag gccctggcca
      421 tcgtggccaa acgcgggact tgaagccgca cttttgtctc atccgctggt gcggcgtaga
      481 caagcaagat aatcgcgagt cagcgcttgc cgcgcttggc gtagggattt ttcttctcgc
      541 gcagcgcgag gcgaatgggc gtaccgggca gatcgaacgt ttcgcgcagg ctgttgacga
      601 ggtagcggcg gtaagcatcc ggtaaggcat cggcgcggct cgtgaacagg acgaagcttg
      661 gtgggcggct cttctgctgg gtgatgtagt cgagccggat cggccggcct gcaacgacgg
      721 gcggcgggtg ggaggaaacg acctcgccga gccagcggtt gagcgcactc gttcccaccc
      781 gtcggttcca ggttgcatgc gccgcgatga cggcttgcat caggcggtcg agtccctcgc
      841 cggtgagccc cgagacggct gccacgggca cgcccttgac ctgcggcagc cgatgatcga
      901 cttcctcgcg gaggttcttg attgcgccgg gacggcgttc gaccaggtcc cacttgttca
      961 tgccgatgac gagggcgcgg ccctcgcgct cgatgagatc ggcgatgcga aggtcctgtt
     1021 cctcgaacgg cttttgcgcg tccatcagca agacgacgac ctcggcgaaa cgcacggcat
     1081 taagcgcgtc cgctaccgag agcttctcca gcttcccttc gatccgcgcg cgacggcgca
     1141 atccggcggt gtcgtggacc cggaagcgct ggtcccgcca catcaaatcg acggcgatgg
     1201 cgtcgcgggt gatgccggcc tcgggcccgg tcagcagccg ctcctcgccg agcagccgat
     1261 tgaccagcgt cgattttccc gaattggggc ggccgaccac cgcgatgcgg atcggcttgc
     1321 gatctgcatc tggcgcgtcg acttcaccgg ccgcggtcgc aggcgccgtc gcctcgggca
     1381 gcgcctcgcg caaggcggca tagagatcgg ccaggccttc cccgtgctcg gcggagatcg
     1441 cgatcggctc cccgagaccg agctcatatg cctccaacag gccggcctcg gcggccctcc
     1501 cctcgctctt gttggcgatg acaatcgcgg gcttgccgga tttgcgcacg agattagcaa
     1561 aggcgcggtc ggcaggtgtc gcgcctgcgc gggcatcaat gaggaacatc actgcatcag
     1621 cggcagcgat ggcggccccc gtctgctctt gcatgcgggc ggtcaagctc tccggtcgag
     1681 cctcttcgag gcccgccgta tcgatggcga cgaacgtcag gtcacccagc cgcgcttgcg
     1741 cttcgcgccg atcgcgcgtg acgccgggga ggtcatcgac caatgcgacg cgcttgccga
     1801 caagacgatt gaacagcgtc gacttgccga cattcggccg tccgacaatg gcgaccgtga
     1861 aagtcatgac cacgcagagc gcgttagtga cacgctctat tgcccggtgg cagtgaggag
     1921 tgcaatcagc gcggcgcggg cggatcgggc caagcgacgc caccggaccg gccctgcgcc
     1981 gacccgggcc aggcgcccgc cgccggttgc tgttgcatcg gcggcggatc aggccattgg
     2041 acctgcgatt gcgccggggc cggttgcgtt tgtgccgcag gttgcgtttg tgccggccga
     2101 accgtgacgg cggtcggtct cgattcctct tgcggcttgt cctcttgcgg cttggctacg
     2161 attttcggtt tcggcttggg tttgggcttg ctttccgcct tgggctcagc gggcgcagcc
     2221 tgcgcggtcg gctgcgcctg ctcggtctgc tccgcctgct cgatgcccgg attgcccttg
     2281 accaactcct tgggcacgcc ctgcggcaca ccgggcgtgc cctccgggaa caccgccttg
     2341 cgttcaccgg ggagccgctt cttggtgttg aaaaaatccg tatccacgat gctcgtcgga
     2401 tcgaatcctt cgcaccctgc aagtgcgagg ccgagcgaca gcgtcaggac ggtgaaaccg
     2461 atgcgtgcta agcggctcat gctgcgatct tcaactcttg ctcgcgccgg cgcctaatgc
     2521 catcagcatc tcgacgcggg agcgggtgcc ggcgggcgtc tgcgcatcgg tcatgaccat
     2581 gtcgaaccac cgcttggccg ccgccgtatc gccggcacgc caagcagcga gcaccaggaa
     2641 ttcgcgcgcg gtatgacgga acgtgcggtc attcgccgca agcggctcg
//
LOCUS       DATCWM010000244         2252 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_261247, whole genome shotgun sequence.
ACCESSION   DATCWM010000244 DATCWM010000000
VERSION     DATCWM010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2252
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_261247"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..871)
                     /locus_tag="VIQ50_04725"
     CDS             complement(<1..871)
                     /locus_tag="VIQ50_04725"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359716.1"
                     /translation="MSCHGRREFITLLGGAAATWPVVARAQQRDRTRRIGVLMPASAD
                     DAESQTRVGAFLQGLQQLGWTIGRNVRVDTHWATSDAASIRKHAAELAALAPDAILAF
                     GASTVGPLLQETRTVPIVFPVVGDPVAAGFVESLARPGRNATGFMTFEYGMGAKWLEL
                     LKQIAPAVTRVAVLRDPAIPTGPAQFGVIQAAAPSAGMEVRPVDARDAGEIERGVAAL
                     ARTSNSGLIITASAASQVHRDLIITLAARHKLPAVYYERLFVSVGGLISYGPDFVDQF
                     RLAAGYVDRILKGE"
     gene            complement(1126..1824)
                     /locus_tag="VIQ50_04730"
     CDS             complement(1126..1824)
                     /locus_tag="VIQ50_04730"
                     /inference="COORDINATES: protein motif:HMM:NF033542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEY9359717.1"
                     /translation="MRHLSAKLLVIAVLLHRGRERLVRQRTGLVNALAHLAEFGIIAP
                     QGLRHAGRLTAIVRDEDDAVLPDLARQVLQVLAAQIEQLEAAVAAIEKQLMAWHKSNP
                     VSQRLATIPGIGPIIATAIAATVTEPSGFRSGREFAAWLGLVPRQSSTGGKIRLGGIS
                     KRGNRYLRRLLINGASANLLRSKATNADPWVIGLRRRRPSLVVAVALANKTARIAWAV
                     MQRQENYQRLAAAA"
     gene            complement(1842..>2252)
                     /locus_tag="VIQ50_04735"
     CDS             complement(1842..>2252)
                     /locus_tag="VIQ50_04735"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
                     /protein_id="HEY9359718.1"
                     /translation="GVRLEPVEMRGSGDLEKAFATVNAVGCDALYVVSSRHTTLNTPA
                     IVNFASQNKIPLAGGWGAWARAGGLLSYGPNVNEMYQHVLEYVDRIFRGAKPGDLPIQ
                     QPTRFELIINAKAAKTIGIEIAPTLLARADEVIE"
BASE COUNT          426 a          746 c          674 g          406 t
ORIGIN      
        1 tctcgccctt gaggatacga tcgacgtagc cagccgcaag ccggaattga tcgacaaaat
       61 caggtccata ggaaatcagg ccgccgacgg agacgaataa gcgctcgtaa taaaccgcgg
      121 gcaacttatg ccgagccgca agcgtgatga ttagatcgcg atgaacctgc gaggccgcgc
      181 tcgccgtgat gattaggccg ctattagagg tccgagcgag ggcagcaact ccgcgctcga
      241 tctccccggc gtcgcgcgcg tcaaccgggc gtacttccat cccggccgac ggcgccgcgg
      301 cttggatcac gccgaattgg gcagggccgg tgggtatagc gggatctcga agtaccgcca
      361 ctcgtgtcac agcgggcgca atttgcttga gcagttccag ccacttcgcg cccataccat
      421 attcgaatgt catgaaaccg gtggcgttcc ggcccggccg cgccagactc tcgacgaagc
      481 cggcggcgac cggatcgccg acgaccggga acacgattgg gaccgtgcgg gtctcttgca
      541 acaacggccc cacagtcgaa gcgccaaaag ccagaatggc gtcaggggcg agcgctgcca
      601 attctgctgc gtgtttgcga atgctcgcag cgtcggatgt ggcccagtga gtatcgaccc
      661 gcacattgcg accgatggtc cagcccaatt gctgcagtcc ctgcaggaac gctccgacac
      721 gggtctgaga ctccgcatcg tcggcggatg cgggcatgag cacgccgatt cgtcgcgtac
      781 ggtcacgctg ctgcgcgcgc gccacaactg gccacgtcgc cgccgcgccg ccgagcagcg
      841 tgatgaactc gcgacgccca tggcaactca tgtgtggatg gcccccgcct ggcaagagat
      901 aacttcgcgt accgcacaga agtcgcttgc agtcatgtgt ccggcctgtt cacgcagtcc
      961 ggatggactg ctggccctga tggagtccgc gaaccgaggc ctcatcactc gagcgggatc
     1021 gatgtcccga tgaaccggca ggcttctctc ggttgcgtcg gatcgaccga ctgtgccatc
     1081 acgcgtcatt actctctcgc aagctccgga acctggctca gcgacctagg ccgccgctgc
     1141 caggcgctgg tagttctctt gccgctgcat cacagcccag gcgatgcgcg ccgtcttgtt
     1201 cgccaacgcc acagcgacga ccaggctcgg ccgccgccgg cgcagtccga tcacccaggg
     1261 atcggcattg gttgccttcg agcgcagcag attggcgctg gcgccgttga tcaggagccg
     1321 tcgcaaatag cggttgccgc gcttggatat tccgcccagg cggatcttgc caccggtcga
     1381 gctctgccgg ggcaccagac caagccaagc cgcaaactcg cgcccgctgc ggaagccgct
     1441 cggctccgta accgtcgccg caatcgccgt agcaatgatc ggcccgatgc cagggatcgt
     1501 cgccaaccgc tggctgaccg ggttgctctt gtgccaggcc atgagttgct tctcgatcgc
     1561 cgcaaccgcc gcctccagct gctcaatctg tgcggccaac acctgtagta cttggcgtgc
     1621 caaatccggc agcaccgcgt cgtcctcgtc gcgcacgatg gcggtcagcc tgccggcatg
     1681 gcgcagccct tgcggcgcaa tgatcccgaa ctccgccaag tgcgccaatg cattcaccag
     1741 ccccgtgcgc tggcgaacca gccgctcgcg gccacggtgc agcagcacag cgataaccag
     1801 cagtttggca ctcagatgcc gcaagggggc catccacccc atcattcaat cacctcgtcg
     1861 gcacgggcga gaagggtagg agctatctca attccaatcg tcttagctgc cttagcgttg
     1921 atgatcagtt cgaacctcgt cggctgctga ataggaaggt ctcccggttt cgcacctcga
     1981 aaaatacggt cgacgtattc aaggacgtgt tggtacattt cgttcacgtt tggcccgtac
     2041 gagagaagcc cacctgcacg cgcccaagct ccccagccgc ccgccaacgg gattttgttc
     2101 tgtgatgcga aattgacgat cgctggcgtg ttgagggtcg tgtgccgcga tgacacgacg
     2161 tagagggcgt cacaaccgac cgcgttgact gtggcaaacg ccttttctaa gtcgcctgag
     2221 cctcgcattt cgaccggctc aagacgtacc cc
//
LOCUS       DATCWM010000245         3213 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_493352, whole genome shotgun sequence.
ACCESSION   DATCWM010000245 DATCWM010000000
VERSION     DATCWM010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3213
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_493352"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..368
                     /locus_tag="VIQ50_04740"
     CDS             <1..368
                     /locus_tag="VIQ50_04740"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEY9359719.1"
                     /translation="LTAGIQSGNTSDFVAKRLLAEGTIANIKYYPYHGIATALDDLEA
                     GRIGLVIKLFPVISWLVKDRPQLSVALEVPTHEKLGIAFAKENQPLCDAVNRALARLR
                     ENGEFARLQARWIVRNVSS"
     gene            378..737
                     /locus_tag="VIQ50_04745"
     CDS             378..737
                     /locus_tag="VIQ50_04745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY9359720.1"
                     /translation="MLHAFKLYTGPDNASHVKEGTVAENDRTDVVAIHFKETPAHSSF
                     DWHNDPEPQYVITLSGTLEFTTRDGETFVVRPGDVLVATDHVGSGHKWRLIDDQPWRR
                     AYVVLKPGARDSFQAKP"
     gene            1388..1570
                     /locus_tag="VIQ50_04750"
     CDS             1388..1570
                     /locus_tag="VIQ50_04750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359721.1"
                     /translation="MVQGMMPKEEMSMYRFALVALLCVAALPSPSRAQNYPSKPIHSE
                     YEKWRKVIVEGKIKPE"
     gene            complement(1580..1978)
                     /locus_tag="VIQ50_04755"
     CDS             complement(1580..1978)
                     /locus_tag="VIQ50_04755"
                     /inference="COORDINATES: protein motif:HMM:NF024304.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PPOX class F420-dependent oxidoreductase"
                     /protein_id="HEY9359722.1"
                     /translation="MAATIPDKYLDLLEQKKAFAILATVMPDGSPQVTPVWFDRTNGL
                     IRVNTARGRTKARTLKAGAAVAMAIVDPDNPYRYVQIRGRVRRVTEDGAAQHIDSLAK
                     KYLGKDKYPGPPGEVRLLCEIEPTSASGMG"
     gene            2433..>3213
                     /locus_tag="VIQ50_04760"
     CDS             2433..>3213
                     /locus_tag="VIQ50_04760"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9359723.1"
                     /translation="MPLGSRKAMVVAVVALCSFAPATMRAQEFPSRVIRIVVAFPAGG
                     PTDFVARLVADRLKPLLGQNVIVENKPGANGAIGADYVAKGEADGHLLFLTTVGAVTI
                     TPHLSKPNYDTLRDFAPVTLVVRPTTILVVRPDAAINSAKELAALAKEKPATIPFAST
                     GSGSTTHLALELYQAAAKVKFLHVPYRGAAPALTDLLGGQVTAMFADTPVLLPHIRGG
                     KLKPIGAASAERNPLLPDVATLAEQGFPDTVADNWYGLLAPA"
BASE COUNT          638 a         1039 c          978 g          558 t
ORIGIN      
        1 gtttgaccgc cggcatccag tccggcaaca cctcggattt tgtcgccaag cggctgttgg
       61 ccgaaggcac aatcgcaaat atcaagtact atccgtatca cggcatcgcg accgccctcg
      121 acgacctcga ggccggacgc atcggtctgg tgatcaaact attcccggtt atctcgtggt
      181 tggtgaagga ccgcccgcaa ttgtcggtcg cgctcgaggt gccgacccac gaaaagctcg
      241 ggatcgcgtt tgccaaggaa aaccagccgc tgtgcgatgc cgtcaatcgg gcgcttgcga
      301 ggctgcgcga gaacggcgaa ttcgcgcggc tgcaggcgcg atggatcgtg cgcaacgtca
      361 gctcgtgagg tgcaagcatg ctgcatgcct tcaagctcta taccggaccg gacaacgcct
      421 ctcatgtgaa ggagggcacg gttgccgaga acgatcgcac cgatgtcgtc gcgatccatt
      481 tcaaggaaac gccggcgcat tcgtccttcg attggcacaa tgatcccgaa ccgcaatacg
      541 tcatcacgct ctccggcacg ctcgagttca ccacgcgcga cggcgagaca tttgtggtgc
      601 gtccgggcga cgtgctggtc gccaccgacc acgtgggaag cggacacaag tggcggctga
      661 tcgatgatca accctggcgg cgcgcctatg tcgtgctcaa gcccggcgcc cgcgattcgt
      721 tccaggcgaa gccgtaggac atggcgtgct caagcacagc gagaaattaa aggggccgcc
      781 caacgagggc ggcccacgct cacgccacgc tacgactaaa cttacattcg gccacgattg
      841 ctgcgccggc cgatcaggcg tcgtcgcggg cgcaaggcat tcctggctca taggcggggc
      901 tcggcgatcc cgccccacga cgttcgcgcc accgacggca agcgtcgcgc gccattgcaa
      961 gtggcagcat gccggcgggg agaaatatgc caagcgccag catcacccaa agccagtcgg
     1021 aaacggaatc catcgctaca tcccctgtgc acgatcccac cgaccaattc cgacgcgctc
     1081 ggaacggtcg aatcattcgc aggctcgcgg gatcgggcgc ccgatcacag gcatcaagag
     1141 acagacatgc gcccgccagc ccggcgtaac gctcgctaat gtgccgcacc gcaaaaagtt
     1201 tcatgctcag tcggcgaaag cgcagaacgt aagctattga aatggcgtat ttttccgata
     1261 ttgcagagca gccatgcttt atgccatggc tcacgactga aaaatcgagg ttgctgcgct
     1321 cggcagccga aaggctcctc gacaggccgc cgcggagcct gttcaggagc tggcgagcca
     1381 gcaattcgtg gtccagggca tgatgccgaa ggaggaaatg agcatgtatc gctttgcatt
     1441 ggtggcgttg ctctgcgtgg cggcgttgcc atcgccatcg cgcgcgcaga attatcccag
     1501 caagccgatc cactcggaat acgagaagtg gaggaaggtg atcgtcgagg gcaaaatcaa
     1561 gccggaatag aagcgccctt cagcccatcc cggatgcgga cgtcggctcg atctcgcaca
     1621 gcaggcgcac ctctccgggc ggaccagggt atttgtcctt ccccagatac ttcttggcga
     1681 gcgaatcgat gtgctgggcg gcgccgtcct ccgtgacccg ccggacgcgg ccgcgaatct
     1741 ggacgtaacg gtagggattg tcgggatcga cgatggccat cgcgacggcc gcgcccgctt
     1801 tcagggtgcg cgccttggtc cgcccccgcg cggtgttcac gcgaatgagg ccattggttc
     1861 gatcgaacca gaccggcgtc acctgcggcg agccatccgg catcaccgtg gcgagaatcg
     1921 caaacgcttt cttctgctcc aacaggtcga gatatttgtc gggaatggtt gctgccatga
     1981 cacgatctcc ttgcgcagca tagccggacg cgagccaaag cgcaccccca aacaagcgcg
     2041 tctacgcggg ggcgatccat cattcgcttc gcgccgccat gcgttccgcg cattcacaac
     2101 cgcgacggca atgacaaaga agggccaccc tcgcgggcag cccttccatt gtcgagccgt
     2161 gatccggcta aaccagcgtg aacacaccgc cttcagacgg tgcggacccc ctgagaggca
     2221 aggatccagc tcacggatgc cggcaatcgc ggcgatagac aatgagacac tggatcacct
     2281 cctttcggtt gttgacgacg cgcgcaatgt accgagatgt cgcgcattgt caaagcaagc
     2341 ccatgcgaaa aatcttccca ccaccggttg tcttgcggca acagaaaggt tcaatgagcg
     2401 gccccttcag atcaagcctt cgggaggaac atatgccgct gggatcaagg aaggccatgg
     2461 tcgtggcggt cgtcgcgcta tgttcgttcg cgcccgcgac aatgcgcgcg caggagtttc
     2521 cctcgcgcgt catccgcatt gtcgtcgcct tccctgccgg cgggccgacc gatttcgtgg
     2581 cgcggctcgt tgccgacagg ctcaagccgc tgctcgggca gaacgtgatc gtcgagaaca
     2641 agccgggcgc gaacggcgcg atcggcgccg actacgtcgc aaaaggcgag gccgacgggc
     2701 atctgttgtt tctcaccacc gtcggtgcgg tcacgatcac gccgcatctg agcaagccta
     2761 actacgacac gctgcgcgat ttcgcgccgg taaccttggt ggtgcggccc accacgatcc
     2821 tggtggtgag gcccgacgcg gcgatcaact ccgccaagga gctcgccgcg cttgccaagg
     2881 agaagcccgc gaccattccc ttcgcctcca ccggatcggg cagcacgacc catctcgcgc
     2941 tcgagcttta tcaggccgcg gccaaggtga aattcctgca tgtgccctat cgcggggcgg
     3001 cgccggcctt aaccgatctc ctcggcggcc aggtcacggc gatgtttgcc gacacgccgg
     3061 tgctactgcc gcacatccgc ggcggcaagc tcaagccgat cggcgcggcc tcggctgagc
     3121 gcaatccgct gttgcccgac gtggccacgc tcgccgagca gggctttccc gacaccgttg
     3181 ccgacaactg gtacggcttg ttggcgccgg cga
//
LOCUS       DATCWM010000246         3010 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_498635, whole genome shotgun sequence.
ACCESSION   DATCWM010000246 DATCWM010000000
VERSION     DATCWM010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3010
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_498635"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..720)
                     /locus_tag="VIQ50_04765"
     CDS             complement(<1..720)
                     /locus_tag="VIQ50_04765"
                     /inference="COORDINATES: protein motif:HMM:NF014759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exonuclease H3TH domain-containing
                     protein"
                     /protein_id="HEY9359724.1"
                     /translation="MLVIDGDSFAHRSYHALPKTILRRRGRPAGAILGFANFLLKFYR
                     AEQPRAVLVCWDTLDAPTYRHEKFPAYQSGREFDDALLEQLEMLPQFVAACGFANAKA
                     AGYEADDFLAAAIAAEERRGGSALVASGDRDTFQLASPSTTILYPVRAGEVARIGPAE
                     VRERYGVDPAQVPDFIALRGDPSDRLPGVAGLGAAGAARVLRTYGTLEKALRAGRFSG
                     HAARLRLFRSLATMDRKAKVPR"
     gene            complement(817..1581)
                     /gene="xth"
                     /locus_tag="VIQ50_04770"
                     /pseudo
     CDS             complement(817..1581)
                     /gene="xth"
                     /locus_tag="VIQ50_04770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007592038.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0008311 - double-stranded DNA 3'-5' DNA
                     exonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
     gene            1720..2250
                     /locus_tag="VIQ50_04775"
     CDS             1720..2250
                     /locus_tag="VIQ50_04775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359725.1"
                     /translation="MRLLASSLLIGCTALALPASAHATSWTSAKFPGEQDRAVQGCAD
                     DAQNPGDWFCIFIRCDQPGAPLSLHFSAPGPDVHGDIKLIVDEDTFAIKVPASVKSPL
                     PLSTRAEALPYALVDAMKAGGTISVQGSHLQAPYNRISLENSRRAIERIEWTCGRPYP
                     SAARFWRRITRSLRFF"
     gene            complement(2406..>3010)
                     /locus_tag="VIQ50_04780"
     CDS             complement(2406..>3010)
                     /locus_tag="VIQ50_04780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY9359726.1"
                     /translation="YAKSQLERAAYLARSDTATQQTLDQTQNDVASSSADVAEAQANH
                     AAAVAGPTKEERAIADARVEAAAAALAVLERRLEKTVLRAPTDGVVSVIVAEVGENIR
                     PGQPVLAIEQAGKQWLSFNVREDFLHGIRVGMAVNVRRTGTSETTPALVTEILPLGSF
                     ATWQAERAVGDHDRSTLRLRLDPQGDVSAFEPGMTVWFNR"
BASE COUNT          483 a          973 c          999 g          555 t
ORIGIN      
        1 gcgggggact ttcgccttgc ggtccatggt ggcgagcgat cggaagagcc gcagcctcgc
       61 ggcgtgaccg gaaaaacggc ctgcccggag cgccttctcc agcgtgccat aggtgcgcaa
      121 gacccgcgct gctcccgccg cccccagtcc cgcgaccccc ggcagccggt cggatggatc
      181 gccgcgcaac gcgatgaaat ccggaacctg cgcgggatcg acgccgtagc gctcgcgaac
      241 ctccgccggc ccgatccgcg cgacctcgcc ggcgcgaacc ggataaagaa tggtcgtgct
      301 gggcgaggca agctggaacg tatctcggtc gccgctggcg accagcgcgc tgccgccgcg
      361 ccgttcttcg gcggcgatgg ctgcggcgag gaaatcatcg gcctcgtagc ccgcggcctt
      421 cgcattggca aagccgcacg cggcgacgaa ttgcggcagc atctcgagtt gctcgagtaa
      481 cgcgtcgtcg aattcgcggc cgctctggta ggcaggaaac ttctcgtgcc gataggtggg
      541 cgcgtccaat gtgtcccagc acacgagcac cgcccgcggc tgctccgccc ggtagaactt
      601 cagcagaaaa ttggcgaagc cgaggatcgc gccggcaggc ctgcctctgc gtcgcagaat
      661 cgttttcggc aaggcatgat agctgcgatg ggcaaacgag tcgccgtcga tgaccaacaa
      721 tggcctgcgc gttggcgtcg acgccttcgg ccgcgtcgaa cgcggcgcgg tctttgccgg
      781 gctgcgagaa ctttgccgcg ccttcgtctc ctcgcccagc tcgacccacg ccggggcgtg
      841 atcgctggcg ccttcgttcc cgcggatctt gcggtcgatg ccagccgcga ggagacgctt
      901 tgccgcttgc gcgctcagca gcaaatgatc gatgcgtagg cccgcgtccc gctgccagcg
      961 gtttcgcatg tagtcccaga acgtgtacat cggcacgtca ggatggagcg cgcggattgc
     1021 gtcgacccac ccttggccga ggatacctcg aaaaagggcg cggctttccg gctggaggag
     1081 ggcgtccttc gcataggacg tggtgggata gatgtcgcgg tccgtcggca cgacattgta
     1141 gtcgccggca agcaccacgg ggatgtccgc gccgtagagc tcatgggcat gggctgcgag
     1201 ccggttcatc cacgcgagct tgtacgcgaa tttggggccg ggctgcgggt tgccgttcgg
     1261 cgcatacagc gaggcgacca gcacgccgcg cacggccgcc tcgatgtagc ggctttccgc
     1321 gtcggctctc tcgcccggca gctgcgtgcg ggtgacgatg ggctcgcaac cgcgggcgag
     1381 gatcgccacg ccattccacg acttttgacc gcgccagacc gcgccataac ccgcttgctc
     1441 gattgcgggt gccggaaact ccgcatccgc cgccttgagc tcttgcaggg cgacgacatc
     1501 gggcttggcg ctgcgcagcc aatcgaggag gttggcaagg cgcttgttga cgttattgat
     1561 gttgaaggtc gcaattttca tgacgaagcg agcgcggctc ggttaatgat ttgataattc
     1621 cgcgctggca gtgtgcgcgc tgcgagtcct cgttcgcaga tatgctctgc gggcgatgcg
     1681 gcgcgagtct cagaccgccc gagtcccgga gggtgtcaga tgcggttgtt ggcgtcgagc
     1741 ctgctcatcg gatgcacggc ccttgctttg cccgcaagcg cgcatgccac gtcttggacg
     1801 tcagccaaat tccccgggga acaggatcga gcggttcagg gctgcgccga cgatgcgcag
     1861 aaccccggcg actggttctg cattttcatc cgctgcgatc agcctggcgc gccgctgagc
     1921 ctgcatttct cggcgccggg accggacgtc catggcgaca tcaagctcat cgtcgatgaa
     1981 gacaccttcg caattaaggt gccagcgtcg gtcaaatcgc cgcttccgtt gtcgacgcgc
     2041 gctgaagcgc tgccctatgc cttggtcgac gctatgaagg cgggaggcac gatctcggtc
     2101 caaggctctc atctgcaagc gccgtacaat cgaatttcat tggagaactc acgcagagcc
     2161 atcgaaagaa tcgagtggac gtgtgggcgt ccctatccca gcgccgcgag gttctggcgg
     2221 cgcatcacgc ggagcttgcg cttcttctga tcgcccgcgg cagcgcgtac ctggcggaca
     2281 tttcagttct tccgcgcctc ggtggaagtt ctacagccag gtcgtcaaaa ggccagcaac
     2341 tgccaaaggt ccagtattac aaacgcgcgg ccgggcctca gtcgggaggt gtgccgctgc
     2401 gccgctcagc gattgaacca caccgtcatt ccgggctcga aggcgctcac gtcgccttgc
     2461 ggatcgaggc gcaggcgcag cgtgctgcgg tcgtgatcgc cgaccgcacg ctcggcctgc
     2521 cacgtcgcaa atgatcccaa cggcaggatc tcagtgacga gcgccggggt ggtttcgctc
     2581 gttccagttc ttcgtacgtt taccgccatc cccactctga tgccgtgcaa gaaatcttcc
     2641 cgcacgttga aggacagcca ttgcttgccg gcttgctcga tggccaggac cggctggccg
     2701 gggcggatgt tctcgccgac ttcggcgaca atcacgctga ccacgccgtc ggtgggcgcg
     2761 cgcagaaccg ttttctccag gcggcgctca agcacggcga gcgcggctgc ggccgcctcg
     2821 actcgcgcgt cggcgatggc gcgctcctct ttggtcggac cggccacggc cgcggcatgg
     2881 ttggcttgcg cttcggcgac gtcggcgctt gagctcgcga cgtcattctg ggtttgatcg
     2941 agcgtttgct gcgtggcggt gtcgctgcgc gcgagatagg cggcgcgctc gagctgcgac
     3001 ttcgcatagg
//
LOCUS       DATCWM010000247         3311 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_207216, whole genome shotgun sequence.
ACCESSION   DATCWM010000247 DATCWM010000000
VERSION     DATCWM010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3311
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_207216"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..308
                     /locus_tag="VIQ50_04785"
     CDS             <1..308
                     /locus_tag="VIQ50_04785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="FabF; beta-ketoacyl-ACP synthase II, KASII;
                     catalyzes a condensation reaction in fatty acid
                     biosynthesis: addition of an acyl acceptor of two carbons
                     from malonyl-ACP; required for the elongation of
                     short-chain unsaturated acyl-ACP; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
                     /protein_id="HEY9359727.1"
                     /translation="GMAVISGATGAQPATNEERAWLKSLADLPVRATGSLVGHGLEPQ
                     FSMNIALATLALGRQKLFPPADSSGVEREYEGPLGHVAVTAVGHWRGEGMALVEAVT"
     gene            320..1600
                     /locus_tag="VIQ50_04790"
     CDS             320..1600
                     /locus_tag="VIQ50_04790"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
                     /protein_id="HEY9359728.1"
                     /translation="MAAARGNNGRQVVVVTGMGVITSLGSGKAENWTKLTAGESGIHR
                     ITRFANEGLKTTIAGSVDFVPVEPFCSAELGERMAAMVAEEAIGEACIGSKGDFPGPL
                     FLAVAPVEIEWPHRDTLAAGSGANDTIGYGDLWRASASGRFHAIHERCQFASVAEHLA
                     DRFGTKGAPISVTTACSSGASAIQLGVEAIRRGEADAALCIGTDGSVNAESLIRFSLL
                     SALSTANDPPQAAAKPFSKNRDGFVMAEGAAALVLESYAAATARGAKILGVLAGCGEM
                     ADSFHRTRSSPDGKAIIGCIRNAIADAGIAPDDIDYINPHGTGTPENDKMEYLGVSSV
                     FGERARSIPISSNKSMIGHTLSAAGTVEAVFTLLTLQHQRLPPTINYKIPDPAIPLDV
                     VPNQARDAKVRHALSNSFGFGGQNVSLVMSREPA"
     gene            1604..2626
                     /locus_tag="VIQ50_04795"
     CDS             1604..2626
                     /locus_tag="VIQ50_04795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEY9359729.1"
                     /translation="MRALTLVADRKLEVADLPSPAPPASGEVQIRIKAVALNHLDLWG
                     YRGMAFAKRKLPVVVGVEAAGEIAAIGPDTTAFKPGDRVVMYGALTCGACKACREGRD
                     NLCENVGGIMGFHIDGFARDLVNMPARLVIPVPNGVVLRDAACAPIAFATVQHMLFDN
                     AVLQPGESVLVHAGGSGIGSVAIKMAKAIGCTVITTVGDDAKAEKAKALGADHVVNYR
                     TDRFEGAVRKITAKKGVDVVFEHVGAETFNGSLLCLKRGGRLVTCGSTSGPSTTINLM
                     QLFQQQYRIIGSFGASMRNIRESLAKMANGLLPVIDTEVALADFERGLARLESRQVFG
                     KIIVGF"
     gene            2646..>3311
                     /locus_tag="VIQ50_04800"
     CDS             2646..>3311
                     /locus_tag="VIQ50_04800"
                     /inference="COORDINATES: protein motif:HMM:NF015251.4"
                     /note="Acylates the intermediate (KDO)2-lipid IVA to form
                     (KDO)2-(lauroyl)-lipid IVA; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase"
                     /protein_id="HEY9359730.1"
                     /translation="MSFPRTLAYRLQRHAKTGIDAALGSLAVAMLRMIRATNRKHMAD
                     FAGGFMRTLGPRLKEHRIGRDNFAAAFPDKSQAEIEAILRGVWDNLGRVAAEFAHIDR
                     LRMFDPDPLETGDIVYSKEVDARFRQLRCDGKPALVFAAHLANWELPALIAAKYQLDA
                     TVLYRRPNIGAVSDAIIKLRKGSMGSLVPTGLDAPFKLLRVLEPGGHVAMLVDQHYVK
                     GVDV"
BASE COUNT          578 a         1109 c         1067 g          557 t
ORIGIN      
        1 ccggcatggc ggtgatctcc ggcgcaaccg gcgcgcagcc cgccaccaac gaggagcgcg
       61 cttggctcaa gagcctggcg gacttgccgg tgcgggcgac cgggagcctc gtcgggcacg
      121 gcctcgagcc gcaattttcc atgaacatcg cgcttgccac gctcgcactc ggtcgccaaa
      181 agttgtttcc gcccgcggac tcctcggggg tcgaacggga gtatgaaggc ccgctcgggc
      241 acgtcgcagt caccgccgtc ggtcactggc gcggcgaggg catggcactg gtcgaggcgg
      301 tcacctgaag gaggcttgca tggcagctgc gcgcggcaac aacggccggc aggtcgtggt
      361 ggtcacgggt atgggcgtga tcacctcgct gggctcgggc aaggccgaaa actggaccaa
      421 gctcacggcc ggagaatccg gcattcaccg catcacacgt tttgccaatg agggcctcaa
      481 gacaacgatc gccggcagcg tcgatttcgt cccggtcgag cccttctgct cggccgagct
      541 cggcgagcgc atggccgcaa tggtcgcgga ggaagcgatc ggcgaggcgt gcatcggcag
      601 caaaggggac tttcccggcc cgctcttcct tgccgtcgcg ccggtcgaaa tcgaatggcc
      661 gcatcgcgac acgctggcag ccggctccgg cgccaatgac acgatcggct atggcgatct
      721 ctggcgggcg agcgcgtccg gccgctttca cgccattcat gaacgctgcc agttcgcttc
      781 ggtggccgag catctcgccg atcgcttcgg caccaagggc gcgcccattt cggtgaccac
      841 cgcgtgttcg tcgggagcga gcgccattca actcggcgtc gaggcgatcc ggcgcggcga
      901 ggcggacgcc gcgctctgca tcggcaccga cggctcggtg aacgcggaat cgctgatccg
      961 cttctcgctc ttatcggcgc tgtcgaccgc caacgatccg ccgcaagcgg cggcgaagcc
     1021 cttttccaag aaccgcgacg gcttcgtgat ggcggagggc gccgccgcgc tcgtgctcga
     1081 gagctacgcc gccgcgaccg cgcgcggggc gaaaatcctc ggcgtcttgg cgggctgcgg
     1141 ggagatggcg gattcgttcc accggacccg ctcgagcccc gatggcaagg ccatcatcgg
     1201 ctgcatccgc aacgcgatcg ccgacgccgg catcgccccc gacgacatcg actacatcaa
     1261 cccgcacggc accggcacgc ccgagaacga caagatggaa tatctcggcg tgtcctcggt
     1321 cttcggcgag cgcgcgcggt cgataccgat ctcctccaac aagtcgatga tcgggcacac
     1381 gctctcggca gccggcacgg tcgaagccgt gttcaccctg ctgacgttgc agcatcaacg
     1441 cttgccgccg accatcaact acaaaattcc cgatccggcc ataccgctcg atgtcgtgcc
     1501 gaaccaggca cgcgacgcca aggtgcgtca tgcgctgtcg aactcgtttg gtttcggcgg
     1561 ccagaacgtc tcgctggtga tgagccgcga gcccgcgtga cgcatgcggg cgctcacgct
     1621 cgtcgccgac cgcaagctcg aggttgccga cctgccctcc cccgccccac cggcgtcggg
     1681 ggaggtgcag atcaggatca aggcagtcgc gctcaaccac ctcgacctct ggggctaccg
     1741 cggcatggcc tttgcgaagc gcaagctgcc ggtcgtggtc ggcgtcgagg ctgcggggga
     1801 gatcgccgcc atcgggcccg atacgaccgc gttcaagccc ggcgaccgcg tcgtcatgta
     1861 cggcgcgctg acctgcggcg cgtgcaaggc ctgccgcgag ggccgcgaca acctgtgcga
     1921 aaacgtcggc ggcatcatgg gcttccatat cgacggcttc gcccgagatc tcgtcaacat
     1981 gccggcgcgt ctggtgatcc cggttcccaa cggcgtcgtt ctccgcgacg ccgcctgcgc
     2041 gccgatcgcg tttgcaacgg tgcagcacat gctgttcgac aatgccgtgc tgcaaccggg
     2101 cgagagcgtg ctcgtgcatg ccggcggctc cggcatcggc tcggtcgcca tcaaaatggc
     2161 gaaggccatc ggctgcacgg tcatcaccac ggtcggcgac gatgccaagg cggaaaaggc
     2221 caaggcgctg ggagccgatc atgtcgtcaa ttaccgcacc gatcgcttcg aaggcgcggt
     2281 gcgcaagatc accgccaaga aaggtgtcga cgtggtgttc gagcacgtag gcgccgagac
     2341 cttcaacggt tcgcttctgt gcctcaagcg tggcggacgg ctggtcacgt gcggttcaac
     2401 ttcggggcct tcgacgacca tcaacctgat gcagttgttc cagcagcaat atcgcattat
     2461 cggctcgttc ggcgcttcca tgcgcaatat ccgcgagagt ctcgccaaga tggcgaatgg
     2521 cctgctgccg gtgatcgaca ccgaggtcgc gctcgccgat ttcgagcgcg gactggcgcg
     2581 gctggaaagc cgccaggtgt tcggaaagat catagtcggc ttttgaccat ccgctgcaag
     2641 cgcgcatgag cttcccgcga acgctcgcct atcggctgca acgacatgcc aagaccggca
     2701 ttgacgccgc gctaggatcg ctcgcggtcg caatgttgcg gatgattcgc gcaaccaacc
     2761 ggaagcacat ggccgatttc gccggcgggt tcatgcgcac gctcggtccc cggctcaagg
     2821 aacacagaat cggccgcgac aatttcgccg ccgcctttcc ggataaatcc caggccgaga
     2881 tcgaagcaat tctgcgcggg gtctgggaca atctcggccg cgttgcggcc gagtttgcgc
     2941 acatcgatcg tcttcggatg ttcgatcccg atccgctgga aacaggggat atcgtctaca
     3001 gcaaagaggt agatgcgcgg tttcggcagc tgcgatgcga cggcaagcct gctctggtct
     3061 tcgccgctca tctcgccaac tgggaattgc cggccctgat cgcagccaaa taccagctcg
     3121 atgcgacggt gctttaccgg cggcccaata tcggcgcggt aagcgacgcg atcatcaagc
     3181 ttcgcaaagg cagcatgggc agcctcgtcc ccaccggcct cgacgcgcca ttcaagctcc
     3241 tgcgcgtact ggagcccggc ggccacgtcg ccatgctcgt ggaccaacat tacgtcaagg
     3301 gcgtcgacgt g
//
LOCUS       DATCWM010000248         2575 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_234139, whole genome shotgun sequence.
ACCESSION   DATCWM010000248 DATCWM010000000
VERSION     DATCWM010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2575
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234139"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1467)
                     /gene="ilvD"
                     /locus_tag="VIQ50_04805"
     CDS             complement(<1..1467)
                     /gene="ilvD"
                     /locus_tag="VIQ50_04805"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEY9359731.1"
                     /translation="MDAKANLKAKLPSRHVTEGPERAPHRAFYYAMGLTREQIHQPFV
                     GVASCWNEAAPCNISLMRQAQAVKKGVAAGGGTPREFCTITVTDGIAMGHQGMKSSLP
                     SREVIADSVELTMRGHAYDALVGLAGCDKSLPGMMMVMCRLNVPSIFIYGGSILPGTF
                     RGKPVTIQDVFEAVGQHSVRKLSDADLETLEQNACPSAGACGAQFTANTMATVSEAIG
                     LALPYSAGAPAPYEIRDAFCMTAGEKIVELIKAGIRPRDIVTRKALENAETVVSATGG
                     STNAALHLPAIANECGVKFDLFDVAEVFKRTPYIADLKPSGRFVAKDVFEAGGVPLLM
                     RTLLDHGYLHGECLTVTGRTVAENLKRVKWNKDQDVVRPADKPLSATGGVVGLKGNLA
                     PDGAIVKVAGMANLKFTGPARCFDGEEACFEAVKKKKYKEGDVLVIRYEGPKGGPGMR
                     EMLATTAALYGQGMGGKVALITDGRFSGATRGFCIGHMG"
     gene            complement(1695..2414)
                     /locus_tag="VIQ50_04810"
     CDS             complement(1695..2414)
                     /locus_tag="VIQ50_04810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019200185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9359732.1"
                     /translation="MKVFLAGATGAIGRRLVPLLLRDGHEVTGTTRSADKARELERSG
                     VIPAVLDVFDPHALTAAMRAAKPEIVIHQLTDLPREFDEARIVASYANNARIRSEGTR
                     NLIAAAQAAAARRLIVQSIAFGYAPGGEPHPETDPLNLADPARAVTIKGTADMEQQVL
                     AAAGLDGVILRYGLLYGPGTWHAEAVRRPALHVDAAAHAALLALTRGAAGIYNVADDD
                     GAVSIAKARVELGFDSRFRLR"
BASE COUNT          445 a          842 c          822 g          466 t
ORIGIN      
        1 acccatgtga ccgatgcaga agccgcgggt cgctccggag aagcgcccgt cggtgatcag
       61 cgcgaccttg ccgcccatgc cttgcccata aagggcggcg gtggtcgcca gcatctctcg
      121 catcccgggc ccgcctttgg ggccttcgta gcggattacg agcacgtcgc cttccttgta
      181 cttctttttc ttgacggcct cgaagcacgc ttcctccccg tcaaagcagc gcgccgggcc
      241 ggtaaacttc aagttcgcca tcccagcaac cttcacgatg gcgccgtccg gcgcgaggtt
      301 gcccttgagc ccgacgacgc cgccggtggc ggagagcggc ttgtcggcgg ggcggaccac
      361 gtcctggtcc ttgttccact tcactcgctt gaggttctcg gcgaccgtgc gcccagtcac
      421 ggtcaagcat tcgccgtgaa gatacccgtg gtcgagcagc gtcctcatca agagcggaac
      481 gccgcctgct tcgaatacat ctttggcaac aaagcggccg ctcggtttca aatccgcgat
      541 atatggtgtt cttttgaaga cctcggcgac atcgaagaga tcgaacttca cgccgcattc
      601 gttggcgatc gcgggcagat gcaacgcggc attagtcgag ccgccggtcg ccgacaccac
      661 cgtctcggcg ttttccagcg ctttgcgggt cacgatgtcg cgcggacgaa tgccggcctt
      721 gatcagctcg acgatcttct cgccggcggt catgcagaac gcgtcccgga tctcgtacgg
      781 cgccggagct cccgccgaat agggcagcgc cagcccgatc gcctccgaca ccgtcgccat
      841 cgtattggcc gtgaattgcg ccccgcatgc gcccgccgag ggacaagcat tctgctcgag
      901 cgtctccaaa tcggcgtccg aaagtttgcg aaccgaatgc tggccgaccg cctcgaacac
      961 atcctgaatg gtgacgggct tgccgcggaa ggtgccgggc aggatggagc cgccatagat
     1021 gaagatcgaa ggaacgttca ggcggcacat caccatcatc atgccgggca gcgacttgtc
     1081 acagccggca aggccgacga gcgcgtcata ggcgtgaccg cgcatggtca gttcgactga
     1141 atcggcgatc acctcgcgcg aggggagcga ggacttcatg ccttgatgcc ccatggcgat
     1201 gccgtcggtg acggtgatgg tgcagaactc gcgcggcgtg ccgccgccgg ctgcgacgcc
     1261 cttcttcacc gcctgggcct ggcgcatcag cgagatgttg cagggggccg cctcgttcca
     1321 gcagctcgcc acgcccacga aaggctgatg gatctgctcc cgcgtgagcc ccatcgcgta
     1381 atagaaggcg cggtgcggcg cgcgctcggg accctcggtc acgtggcggc tgggcaactt
     1441 cgctttgagg ttagccttcg cgtccattgg ttcgccttcg tcctcatccg gtcacttgcg
     1501 cgcccgccgg tagctctcgt ggccgcgtat ggccaaatcg cggcgcggcc agccgggatt
     1561 cccattcgaa agtcaatgtt ttagccgtgt tgcgagcgag caacagggat taatagccgg
     1621 ttaatgccga atgtcacacc ttggccacaa cagcgtcccg ctttggcaaa aaacgttgcc
     1681 ggcgcgacgc agtttcaccg caaacgaaat cgcgaatcga agccgagctc gacgcgcgcc
     1741 ttggcgatcg agaccgcgcc gtcatcatcc gcgacgttgt agatgccagc cgcgccgcgc
     1801 gtgagtgcga gcaacgccgc gtgcgccgcg gcatcgacgt gcaacgcagg tctgcggacg
     1861 gcctcggcgt gccaggtgcc tggtccataa agaaggccat agcgcaggat gacgccatcg
     1921 aggccggcgg ccgcgagcac ctgttgctcc atatcggcgg tgcctttgat cgtgaccgcc
     1981 cgcgccgggt cggccagatt gagcggatcg gtctcgggat gcggctcgcc ccctggcgca
     2041 taaccaaagg cgatgctctg aacgatcaag cgccgcgccg cggccgcctg cgcagccgcg
     2101 atcaggttgc gcgtgccttc gctgcggatg cgggcgttgt tggcgtagga cgcgacgatc
     2161 cgcgcctcat cgaattcgcg cggcagatcg gtgagctggt ggatcacgat ctcgggcttg
     2221 gcggcgcgca tcgccgcggt gagcgcgtgc ggatcgaaaa catcgagcac ggcggggatg
     2281 acgccggagc gctcgagttc gcgcgccttg tcggccgagc gcgtggtccc cgtgacctca
     2341 tggccgtcgc gcagaaggag cggcaccagc cgacgaccga tggcgccggt ggcgccagcg
     2401 agaaatactt tcatgtgata ctcttgcgtc agatactctt gcgtcgtggc gggcttctaa
     2461 ccgcaagtcg ggttcacccg acttgcggca ctaatagtgc ggaactcggg caagcccaag
     2521 tcccagtgcc atccccgtct ttgctcctgc cgatgcaaaa caagacgtgg atgcc
//
LOCUS       DATCWM010000249         2031 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_455449, whole genome shotgun sequence.
ACCESSION   DATCWM010000249 DATCWM010000000
VERSION     DATCWM010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2031
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_455449"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..368)
                     /locus_tag="VIQ50_04815"
     CDS             complement(<1..368)
                     /locus_tag="VIQ50_04815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY9359733.1"
                     /translation="MTALLSVTDLHVSYGKVEAVTGVSLEMQAGHIVTVIGPNGAGKT
                     TLLAALMGLLPSKGESWYEAQDLRILSTEERVRRGICLVPERRELFTEMTVADNLVLG
                     AYTRWRDREAVQRDLQEVYER"
     gene            complement(365..>2031)
                     /locus_tag="VIQ50_04820"
     CDS             complement(365..>2031)
                     /locus_tag="VIQ50_04820"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     ATP-binding protein/permease"
                     /protein_id="HEY9359734.1"
                     /translation="GIYAFAVLGLILLTGVGGLTSFGQAAFVGIGAYATAWYTAVHGG
                     SPWIGLLLALLLTGFVATVLGAATLRLGGHFLPLSTIAWGVAIFFLFGNIDAIGRYSG
                     LSGIPAITIGPISLGGNLAMYCFIWALLGIVMFLCRNLLDSRKGRAVRSLRGGIAMVE
                     SLAIDSFRMRLAVFVLAGTLAGLSGWLYAHMQRYVNPAPFDIRPSIELLLMALVGGAG
                     HIAGAVVGAAVITLLKNTLQDVLPVFTRYSAQLEVVAFGVLFVVILQKARAGIVPMIN
                     RYLPRPPSALPAQAAPLARRARPIVSGQPVLTIQGATKRFGALAAVNDVSFEVKAGEV
                     LGLIGPNGAGKSTLLNLITGTAKPNAGRIMFLDHDVTKLAPRHIAARGVARTFQHVKL
                     RPNMTLLDNALLGTYSRTRSGFLAGAMRLDRREEKSAQFEAVQQLKRVGLAEKAGELA
                     GNLPLGQQRLLEVARALAADPVVVILDEPAAGLRSLEKQILSQLLRTLRNEGMTIVLV
                     EHDMEFVMNLVDRIVVMDFGSKLAEGVPADIRAEPRVQEAYLGGVA"
BASE COUNT          407 a          642 c          648 g          334 t
ORIGIN      
        1 cgctcgtaga cctcctgcaa atcccgttgc acggcttcgc ggtcccgcca gcgcgtatag
       61 gcgcccaaaa cgagattgtc cgccaccgtc atctcggtga agagttcgcg gcgctccggc
      121 accaggcaga tccctcgacg cacgcgctct tccgtactca gaatgcgaag atcttgcgcc
      181 tcataccaac tctcgccttt ggacggcaaa agacccatca gcgctgcgag cagcgtcgtt
      241 tttccggcgc cgtttgggcc gatcacggtc acgatgtgac cggcttgcat ttcgagggaa
      301 acgccggtca cggcctcgac cttgccgtag ctcacatgca aatcggtgac cgacagcagc
      361 gcggtcatgc gacaccgcca agataggctt cctgcacacg cggctcggcg cggatgtcgg
      421 cggggacgcc ttccgcgagc ttcgaaccga agtccatcac gacgattcgg tcgacgaggt
      481 tcatgacgaa ttccatgtcg tgttcgacca gaacaatcgt catgccctcg ttgcgcaagg
      541 tgcgaaggag ctgagacaga atttgtttct cgaggctgcg caggccggcg gccggctcgt
      601 ccagaatcac cacgacaggg tcggcggcga gcgcgcgcgc gacttccaga aggcgctgtt
      661 gacccagcgg gagattaccc gcgagttcgc cggccttttc ggcgaggccg acgcgcttca
      721 actgctggac agcctcgaac tgcgccgatt tttcttcgcg gcgatcgagc cgcatcgcgc
      781 cggcgagaaa tcccgagcgc gtgcgcgaat acgtccccaa cagcgcattg tcgagcagcg
      841 tcatgttcgg ccgcagtttc acgtgctgga acgtgcgtgc gacgcctctg gcggcgatgt
      901 gacgcggcgc caatttcgtc acgtcgtgat ccaggaacat gatccgcccg gcgtttggtt
      961 tcgcggtccc ggtgatcaga ttgagaagcg tgcttttgcc ggctccgttc ggtccgatca
     1021 ggcccaagac ctcgccggcc ttcacctcga agctcacgtc gttcacggcg gcgagtgcgc
     1081 cgaaccgttt cgtcgcgcct tgaattgtca gcacgggctg gccggacacg atggggcgtg
     1141 cgcggcgtgc aagcggcgcc gcctgcgccg gcagggccga aggcggacgc ggcagatagc
     1201 ggttgatcat gggaacgatg cccgcgcgtg ccttttgcag tatgacgacg aaaaggacgc
     1261 cgaacgcgac aacttcgagc tgcgcgctgt agcgcgtgaa tacgggaagc acgtcctgca
     1321 aggtgttctt gagcaacgtg atgacggccg cgccgaccac cgcgcccgcg atgtggccgg
     1381 caccaccgac cagcgccatc agcaggagtt cgatgctggg acggatgtcg aacggcgccg
     1441 ggttcacgta gcgttgcata tgcgcataaa gccagccgga cagacctgcg agcgttccgg
     1501 ctaaaacaaa aacggcaagt cgcatccgaa aggaatcgat cgcgaggctt tccaccatgg
     1561 cgatgccgcc gcgcaggctg cggaccgcac ggcccttgcg cgagtcgagc aggttcctgc
     1621 acagaaacat gacgataccg agcagtgccc aaatgaagca gtacatcgcg agattgccgc
     1681 cgagcgagat cggcccgatg gtgattgccg gaattccaga cagcccgctg tagcgcccga
     1741 tcgcatcgat gtttccgaac aggaaaaaga tggcaacgcc ccaggcgatc gtgctcagcg
     1801 gcaggaagtg accgccaagc cgcagggttg cggcaccgag aaccgtcgcg acgaacccgg
     1861 tgagaaggag cgcgagtagc aggccaatcc agggcgagcc gccgtgcact gcggtgtacc
     1921 aggcggtggc ataggcgccg atgccgacga aggcagcctg accgaatgac gtgagcccgc
     1981 ccaccccggt gagcagaatg agacccagca cggcaaaggc atagatgccg a
//
LOCUS       DATCWM010000250         2009 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_255869, whole genome shotgun sequence.
ACCESSION   DATCWM010000250 DATCWM010000000
VERSION     DATCWM010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2009
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_255869"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            816..>2009
                     /locus_tag="VIQ50_04825"
     CDS             816..>2009
                     /locus_tag="VIQ50_04825"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009797450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEY9359735.1"
                     /translation="MFVRAAISAFFLGVTVLGGASAAERTGEAVPPTSAGDDFPRASD
                     VRLGGDDAQTRLIIDLSRKIDVRTFTLANPYRVVMDMPQVTFQFPPKVGEAGRGLIKA
                     FRFGLVMQGGSRMVIDLARPAQVDMAFVLDPIHDQPARLVLHLTAIDREAFMRSLALE
                     SGAPQRSKPEAPVETKGNGDSRPLIVIDPGHGGIDNGTRAASGEMEKTIVLEFSLLLR
                     DKLEKAAKYRVLMTRTDDTFVALGDRVQFARARQAALFISIHADALRRREGDAQGATI
                     YTLSERASDPRAARLAEAENQADVIAGLDLSAEEKDVAGILFDLARRETKTFSVQFAQ
                     TMVGALKNAARLHQHPLKSASFAVLKAPDVPSVLVELGYVSNKADLKSLISTEWRDRT
                     ADSIVQ"
BASE COUNT          350 a          647 c          662 g          350 t
ORIGIN      
        1 ccttggccaa atagatgttg ccgcgaagtt gcttacggtt tgcggattcg aagtcgaatt
       61 cctcgacgcg atggccgcgc agaacaacca cccgggtctc ctccggatgg gtcgcatcga
      121 cgagcatttt gttggacatt gaccaatctc ttaatcgccg gctggcgcgg cgctcgccgc
      181 cacatggacg gggcaagacg gcgcgaccga agaccggcct gactgtggtt gaaacgatga
      241 gttctgtgcg cgcgcgagat cgaggcgtgg cagacaagcg agcctgcgca catcgccgaa
      301 ccggtcatgg cgccgttcgg ggacgccatg gtggcttggc agcgatcggt tgaagtctcg
      361 acgcgcggtc gtagcatgac ctttggccca tgcgaggcgg cagcgctggc gagcgcggcc
      421 gcgggttctt ggctgacgat attcgactca ggctcgcggg tttgggagca taagccgctt
      481 cggatcgtgt acggcacatg ccgcccgcgg caccggcggt gtccacaaga acatcagctt
      541 cgctgatccg tcggcgccgc acccatgcga cgcgaccaaa tcgtcccgcg aaatcccctc
      601 ccgtcgcgtg tcagggagcg gtctttgcgg tctgccggat gtccgaacgt ggcccgaccg
      661 gaaccataaa tcgtcagcac ccctttatta gggctcgcgg caggcaatgg caagggagcc
      721 ggccgggttc gccgcggcca ccgcggcgag gttaggtttg ggttaactgc acccccgtaa
      781 tggagtaaaa acagtcacgc aggggccggc aaagcatgtt tgtgcgtgcg gcgatctcgg
      841 cttttttcct cggcgtaacg gtcctgggcg gggcgtccgc ggccgagcgc accggcgaag
      901 ccgtcccgcc gaccagcgcc ggggacgatt tccccagggc gagcgacgtg cggctcggcg
      961 gcgatgacgc gcagacccgg ctgatcatcg atttgagccg caagatcgat gtccggacct
     1021 tcaccctcgc caatccctac cgggtggtga tggacatgcc gcaggtcacc ttccagtttc
     1081 cgcccaaggt cggggaggcg gggcgtggtc tgatcaaggc gttccgtttc ggcctggtga
     1141 tgcaaggcgg ctcgcgcatg gtcatcgacc tcgcccggcc ggcgcaggtc gacatggcct
     1201 tcgtgctcga tcccattcat gaccagccgg cccgtctcgt gctccacctc acggcgatcg
     1261 accgcgaggc cttcatgcgc agcctcgcgc tcgagagcgg ggcgccgcag cgcagtaagc
     1321 cggaagcgcc ggtggagacc aaaggcaacg gcgattcccg gccgctgatc gtcatcgatc
     1381 ccggccacgg cggcatcgac aacggcacca gggcggcgag cggggagatg gagaagacca
     1441 tcgtgctcga gttctcgctg ctcctgcgcg acaagctcga aaaggccgcc aagtatcgcg
     1501 tgctcatgac ccgcaccgac gacactttcg tggcgctcgg cgatcgcgtc caattcgcgc
     1561 gtgcgcgtca ggccgcgttg ttcatttcga tccacgccga tgcgttgcgg cgaagggaag
     1621 gcgacgcgca aggggcgacc atttatacgc tctcggaacg tgcctcggac ccgcgcgccg
     1681 cgcgcctggc cgaagccgag aaccaggccg acgtgatcgc gggtctcgat ctgtccgccg
     1741 aggagaaaga cgtcgcaggg attctcttcg atcttgcccg gcgcgagacc aagacgtttt
     1801 ccgtgcagtt cgcgcaaacc atggtcgggg cgctcaagaa cgctgcccgg ctgcaccaac
     1861 atccgttgaa atccgcgagc tttgccgtgc tcaaggcccc cgacgtgccg tcggtcctgg
     1921 tcgagctcgg ctatgtttcg aacaaagccg acctgaagtc gctgatctcg accgaatggc
     1981 gggaccgcac cgccgattcg atcgtccag
//
LOCUS       DATCWM010000251         3412 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_18302, whole genome shotgun sequence.
ACCESSION   DATCWM010000251 DATCWM010000000
VERSION     DATCWM010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3412
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18302"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1106)
                     /locus_tag="VIQ50_04830"
     CDS             complement(<1..1106)
                     /locus_tag="VIQ50_04830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359736.1"
                     /translation="MMTHSTWIQPACKARSWLVPVIAAVLALGAAQRAGAESDAHALM
                     EGRGRDVSFPVACGAEIQPRYDAALAALHSFWYGQALKEFTAITEARPDCAMAYWGIA
                     MSVWNQIWAPPTPTNLKKGSDAITQALALGGKTPREQAYLDALAAFYTDHDKLDHRTR
                     AMAYMRKMEELAQRHSDDVEARIFYALSLLATADGLDKTYKNQLKAGAILEQVFAEKP
                     QHPGPSHYIIHAYDYPALVDRALAAAQNYAICVTVVPHAIHMPSHTYVLLGRWKDAIT
                     ANDAAEMAEADRGTPEDRIHALDYLVYAHLQQAQDDKAKDVLDLALKIENDLIARKHD
                     SGLRSRPFGVAAMEARWALERLDWATAANLPPRP"
     gene            complement(1173..2144)
                     /locus_tag="VIQ50_04835"
     CDS             complement(1173..2144)
                     /locus_tag="VIQ50_04835"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9359737.1"
                     /translation="MKHVAGLLLSLGIASAPGMLQAQDAWPTRPITFVVPYGAGGYTD
                     LVARLTARYVEKALGKPVIVDNRAGAGGFVGTQAVVNAAADGYTFCVCSIGAISIAPF
                     DPNQKIGYDPLRDLAPVGIVSSIAQVVIVNQGLPVKTIAELVSYAKANPGKLNYGSSG
                     AGGLTHYSVELFQARIGIKVVHIPFKSGGPSTAAVVSGEVDFAFANMTEGLPQVRGGA
                     VRGLAVTSLKRSPYLPDLPTVNETVLPDFVVETWNGIMAPSKTPEPIVLKLSDILIKM
                     ADDPEVKEIMARSGADTVKTTPEEYRAQIVWEIAQWKPLIQEIAEKK"
     gene            complement(2306..3019)
                     /locus_tag="VIQ50_04840"
     CDS             complement(2306..3019)
                     /locus_tag="VIQ50_04840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007753187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease activity regulator RraA"
                     /protein_id="HEY9359738.1"
                     /translation="MALSEKARARLMVVSTATLTTVLFKHGLRNTFIHGIHRLNPGGP
                     RMVGPAYTLRYIPAREDLDHLGVFEDRSHPQRKGVEECPPGHVFVIDSRRNASAASAG
                     GILVTRLWKRGVAGLVTDGGLRDSPDIAHLPFPAYHAAPAAPTNLIKHHAVDLDVPIA
                     CGEVPVYPGDVVVGDDEGVAVIPQHIAEEVAEEACEQTVFEDFVQEKVAQGRSIFGIY
                     PPGPEAREEFKRWRAATGR"
     gene            complement(3111..>3412)
                     /locus_tag="VIQ50_04845"
     CDS             complement(3111..>3412)
                     /locus_tag="VIQ50_04845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359739.1"
                     /translation="GARADIIVIDLSGRNTLRYGPVRDPVKSIVECGVGDDVDTVIVD
                     GKAVMEGGIIPGVDFAKLRAQTQAAAEQIWDTLADWDPLGRTHEQACPWSYPIAE"
BASE COUNT          562 a         1109 c         1097 g          644 t
ORIGIN      
        1 ctcggccgcg gcggtaggtt tgccgccgtt gcccagtcga gtcgttcgag cgcccagcgc
       61 gcttccatgg ccgccacacc gaacggacgc gaacgcagac cggagtcgtg cttgcgcgcg
      121 atgaggtcgt tctcgatctt cagcgcgaga tcgagcacgt cttttgcctt gtcgtcttgc
      181 gcctgctgca gatgggcata gaccagataa tcgagcgcgt ggatgcgatc ctccggcgtg
      241 ccccgatcgg cttccgccat ttccgccgcg tcgttggcgg tgattgcatc cttccagcgg
      301 ccgagcagca cgtaggtatg cgacggcatg tggatggcgt gcggcacgac cgtcacgcag
      361 atcgcgtaat tctgcgccgc ggcgagcgcg cggtcgacca gcgcgggata gtcgtatgcg
      421 tggatgatgt aatggctcgg gccggggtgc tgcggcttct ccgcgaacac ttgctccagg
      481 atcgcgccgg ccttgagctg attcttgtag gtcttgtcga gaccgtcggc ggtggcgagc
      541 agcgacaagg cgtagaagat ccgcgcctcg acgtcatcgg agtggcgctg cgcaagttcc
      601 tccattttgc gcatataggc catggcgcgc gtgcgatgat cgagcttgtc atggtcggtg
      661 tagaatgccg cgagcgcatc gagatacgct tgctcgcgcg gcgtcttgcc gcccagcgcc
      721 agggcttgcg tgatggcgtc gcttcctttc ttcaagttgg tgggcgtcgg cggcgcccaa
      781 atctgattcc agacgctcat ggcgatgccc cagtaggcca tggcgcaatc cggcctggcc
      841 tcggtgatcg ccgtaaattc cttcaacgcc tggccgtacc agaacgagtg cagggcggcg
      901 agcgcggcgt cgtagcgagg ttgaatctcg gcgccgcatg ccaccggaaa gctcacgtca
      961 cggccgcggc cctccatcag cgcgtgcgcg tcgctctccg caccggcgcg ttgcgccgcg
     1021 ccgagcgcaa gcacggcagc aatgactgga acgagccacg atcgtgcctt gcacgccggt
     1081 tgaatccagg tggaatgagt catcatggca gcactcccgt gcggttccgt ctgttcatca
     1141 taggtggctt ggtccgccaa gcccagcagc ggctatttct tttccgcaat ctcctggata
     1201 agcggtttcc actgtgcaat ttcccaaacg atctgtgcac ggtactcctc gggcgtggtc
     1261 ttgaccgtat cggcgccgga ccttgccatg atttccttca cctctggatc gtcggccatt
     1321 ttgatcagga tgtcggacaa cttgaggacg atcggttccg gcgtcttcga cggggccatg
     1381 atgccgttcc acgtctcgac gacaaaatcg gggaggactg tctcattgac ggtggggaga
     1441 tccggcaaat aggggctgcg cttgagcgaa gtcacggcga ggccgcgcac cgctccgcct
     1501 ctcacctgcg gcagaccctc agtcatgttg gcgaaagcga aatcgacctc gccggagacc
     1561 accgcggcgg tcgaggggcc gccgctcttg aacgggatgt gcaccacctt gatgccgatg
     1621 cgcgcctgga acaactcgac cgagtagtgg gtcagcccgc cggcgccgct ggagccgtag
     1681 ttgagcttgc cgggattagc cttggcatag gacacgagct ccgcgatcgt ctttaccggc
     1741 aggccctggt tgacgatgac cacctgcgcg atcgagctga cgatgccgac gggcgcgaga
     1801 tcccgcaatg gatcgtagcc aatcttctgg tttggatcga agggcgcaat cgaaatggcg
     1861 ccgatgctgc agacgcagaa cgtataaccg tcggccgccg cattcacgac cgcctgcgtg
     1921 cccacgaaac cgccggcgcc cgcgcggttg tctacaatca ccggcttgcc caaggccttc
     1981 tcgacgtaac gcgcggtcag tcgggcaacc aagtccgtgt agccgcccgc tccatagggc
     2041 acgacgaacg tgatgggccg ggtgggccat gcatcctgcg cttgcagcat ccccggcgcc
     2101 gacgcgatcc ccagcgacaa gagcagtcct gcgacatgct tcatcgcatt ctcctttcgt
     2161 tgcgtaactg caacaagcaa gttctttgcc attgcgctga tatccctctg ccaaccggtc
     2221 attcgtgacg ggcccgcccc caatcgattc ggggctccgc aattgcgacc ccgcgcgttg
     2281 gacgacggct gtgtgcaggc catgctcagc ggccggtggc cgcgcgccag cgcttgaatt
     2341 cctcgcgcgc ctccggcccg ggaggataga tgccgaagat cgagcggccc tgcgccacct
     2401 tctcctgcac gaaatcctcg aacaccgtct gctcgcacgc ctcctccgcc acctcttcgg
     2461 cgatgtgctg cgggatcacc gcaacgccct cgtcgtcgcc gaccacgaca tcgcccgggt
     2521 ataccggcac ttcgccgcac gcgatcggaa catcgaggtc gactgcgtga tgcttgatga
     2581 ggttggtcgg cgccgccggc gcggcgtgat aagcgggaaa cggtaagtgc gcgatgtcgg
     2641 gcgagtcgcg caagccgccg tcggtgacga ggccggcgac gccgcgcttc cacagtcgcg
     2701 tcaccagaat tccgccggcg gaggcagccg aagcgttgcg gcggctgtcg atcacgaaaa
     2761 catggccggg cgggcattct tcgacgccct tgcgctgcgg gtggctgcgg tcctcgaaca
     2821 cgccgagatg atcgaggtct tcgcgcgccg gaatgtagcg cagcgtatac gccgggccga
     2881 ccatgcgcgg cccgccggga ttgagacgat ggatgccgtg gatgaaggtg ttgcgcaggc
     2941 cgtgcttgaa caggacggtc gtcagcgtgg cggtggacac caccatcaac ctggcccgag
     3001 ccttttcgct gagtgccatg gcggctctcc gttttccgcg cgacgtttgc gcccccgccg
     3061 cgccttgtca atcgcacggc gtcaatgcgc aggcgtttgc gcggcgcgcg ctactcggca
     3121 atcggataag accaggggca ggcctgctcg tgggtgcggc cgagcgggtc ccaatccgcg
     3181 agcgtgtccc agatctgctc ggccgcggct tgcgtctgtg cgcgcagctt ggcgaaatcg
     3241 acaccgggaa tgatgccgcc ttccatcacc gcctttccgt cgacgatcac cgtgtcgacg
     3301 tcgtcgccga cgccacattc gacgatgctc ttcacgggat cgcgcaccgg cccgtagcgc
     3361 agcgtatttc gacccgatag atcaatgacg atgatgtcgg cgcgcgcgcc cg
//
LOCUS       DATCWM010000252         2439 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_444823, whole genome shotgun sequence.
ACCESSION   DATCWM010000252 DATCWM010000000
VERSION     DATCWM010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2439)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2439)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2439
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_444823"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            166..1221
                     /locus_tag="VIQ50_04850"
     CDS             166..1221
                     /locus_tag="VIQ50_04850"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY9359740.1"
                     /translation="MADPVSQFATRIAYGARQLPRVAWYIGHGMVMRRLSQAVRQRAG
                     QSPRAHVSVPDRRRLYADMAVLFRRDLANVEAGIYPLPADHDGALPVLLSRSRLFFED
                     LPDVHRRRERRDIRQVLTEDTRGKRPNYYLQNFHFQSGGWLTPESAQRYDTQVEVLFN
                     GSANATRRQALVPLYEIFAGRDQRRLKLLDVGCGTGRFLDSFKQAWPRLPVLGVDLSE
                     AYVAEAKRHLKRWCWIHVVIANGEALPVRNESQDAVTNIFMLHELPPKVRRMAFREFA
                     RVLKPGGRLVVVDSLQLGDEPDYDGMLELFPRSYHEPYYNSYLKENFREIAAGCGLAH
                     LRDVNAFVSKVMVFAKP"
     gene            1386..1700
                     /locus_tag="VIQ50_04855"
     CDS             1386..1700
                     /locus_tag="VIQ50_04855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018456485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359741.1"
                     /translation="MEANKAYFMVRAEVPNESDRANFDQWYGTHHLPLAMDKFRAEKG
                     WRFWSRGDPSVHYALYQFSDMATLQDCLESPVLKLLIADFDQAWPRVARSRDLIEAVQ
                     EA"
     gene            1723..>2439
                     /locus_tag="VIQ50_04860"
     CDS             1723..>2439
                     /locus_tag="VIQ50_04860"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEY9359742.1"
                     /translation="MQLGASPLASQRHLFDIPDDVAFLNCAYISPLPKVSLIAGEGGL
                     RRKARPWTIAPTDFFATSETVRRLFANLINADANDIAFAPSVSYGMSQAAHNIPIAKT
                     QAIVTLSEQFPSNVYPWMDLAERTGAAFVSVPRPGDDDWTSALLSCIGRSTAIVAVPH
                     CHWTDGGLIDLEAVGAACRAVGAALCVDATQSVGALPFDVRRIDPDFVAVAGYKWLLG
                     PYSLGFLYAAPRRQGGRPIEH"
BASE COUNT          418 a          796 c          752 g          473 t
ORIGIN      
        1 ggccgctccc gaggcgccgg tcgacgtcgc ggccactgat ctcgaggatc tcgccgccaa
       61 gctcggcgcg tgacaagtgt catcgccgaa acgtgcgcgg tgctggcgga acaccagctc
      121 gccgccgcat tttagtatgc aggagcgtct cttcggaacg acggcatggc cgatccggtt
      181 tcccaattcg ccacccgcat cgcctatggc gcacggcaac tgccgcgggt tgcctggtac
      241 atcgggcacg gcatggtgat gcggcgtctc tcgcaggccg tgcgccagcg cgccggtcaa
      301 agcccgcgcg cgcatgtgag cgtgcctgat cgccggcggc tttacgccga catggccgtt
      361 ctgtttcggc gcgacctcgc caatgtcgag gccggcatct atcccttgcc cgccgaccat
      421 gacggcgcat tgccggtcct gctctcccgc tcgcgacttt tcttcgagga tctcccggac
      481 gtccatcgcc gccgcgagcg ccgcgacatc cggcaagtgt tgactgagga cacgcgcggc
      541 aaacggccca actattatct gcagaatttc catttccagt cgggcggctg gctgaccccg
      601 gaatcggcgc agcgctacga cacccaggtc gaggtgctgt tcaacgggtc ggccaacgcg
      661 acgcgccggc aagcgctggt gccgctctac gagatcttcg ccgggcgcga tcaacgccgc
      721 ctcaagctgc tcgacgtcgg ctgcggcacc ggccgcttcc tcgattcatt caaacaagca
      781 tggccgcgtc tgccagtgct cggcgtcgat ttgtcggagg cctacgtcgc cgaggcgaag
      841 cgccacctca agcgatggtg ctggatccat gtcgtcatcg ccaatgggga agcgctgccc
      901 gtcaggaacg aaagccagga tgcggtgacg aacatcttca tgctgcacga attgccgccg
      961 aaggtgcggc gaatggcctt tcgcgagttt gcccgtgtgt tgaaaccggg cggccgcctg
     1021 gtcgtggtgg actcactcca gcttggcgat gagcccgact acgacggcat gctcgagctc
     1081 tttccgcgca gttatcacga accctactac aacagttatc tcaaggagaa cttccgcgag
     1141 atcgcggcag gctgcggcct ggcgcacctg cgggacgtca atgcgttcgt gtcgaaagta
     1201 atggttttcg cgaagccgtg agcgatcgag actcgcgcac acccgcgttg tcacatcgtc
     1261 acccgtcgct ccccccgcat actgtgccgt caaaggcttc tacgcctctc tttaatagcc
     1321 tgtggacgcg cgcaagcgct cgcttatgct gggaggcggt cacctcgggc acaggagcag
     1381 cgaagatgga agctaacaaa gcctatttca tggtccgagc ggaggtgcca aacgagtctg
     1441 accgcgccaa cttcgatcaa tggtatggaa cgcaccatct cccgctggcg atggataaat
     1501 tccgtgccga gaaaggctgg cgcttctgga gccgcggcga tccgtcggtc cactatgcgc
     1561 tttatcagtt cagcgacatg gcaactctgc aggactgcct cgagtctcct gtcttaaagc
     1621 tgctcattgc agatttcgat caggcatggc cgcgggtggc gcgcagtcgc gatctgatcg
     1681 aagcggtgca agaggcttga gctgccggag cgggatgcga tcatgcaact cggagcgtcg
     1741 cctcttgcga gtcagcgtca tctcttcgac atcccggatg acgtcgcctt cctgaactgt
     1801 gcctacatat cgccgttgcc gaaagtctcg ctcattgcag gcgagggggg cctgcgccgc
     1861 aaggctcggc cgtggaccat cgcgccgacg gatttcttcg ccacgagcga gacggtgcgg
     1921 agattgtttg caaatctcat caacgccgac gcgaacgaca tcgcctttgc tccgtcggtg
     1981 tcctatggca tgtcgcaagc ggcgcacaat attccgatcg ccaagacgca agccatcgtg
     2041 acgctctcgg agcagttccc atccaacgtc tatccgtgga tggatcttgc cgagcgcacc
     2101 ggcgccgcgt tcgtatcggt accgcggccg ggcgatgacg attggacctc ggcgctgctc
     2161 tcctgcatcg gccgttcgac cgcaatcgtc gccgtcccgc attgtcattg gaccgacggc
     2221 gggctgatcg acctcgaggc ggtcggcgcg gcatgtcgcg ccgtcggcgc cgcgctctgc
     2281 gtggatgcga cccaatcggt cggcgcgctg ccgttcgacg tgagacgcat cgatccggac
     2341 tttgtcgccg tcgccggcta caagtggctg ctcggaccgt atagtctcgg ctttctctac
     2401 gcggcaccgc gccggcaagg cggtcgtccg atcgagcac
//
LOCUS       DATCWM010000253         3282 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_498681, whole genome shotgun sequence.
ACCESSION   DATCWM010000253 DATCWM010000000
VERSION     DATCWM010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3282
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_498681"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..250)
                     /locus_tag="VIQ50_04865"
     CDS             complement(<1..250)
                     /locus_tag="VIQ50_04865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HEY9359743.1"
                     /translation="MYNFTFHRPTTVRQAAGLLTRNPEAKLLAGGHSLLPVMKLRLAN
                     PSALIDLSLVEGLSGVEQKGRSIVIGAMTRHADAANSPV"
     gene            complement(268..2631)
                     /locus_tag="VIQ50_04870"
     CDS             complement(268..2631)
                     /locus_tag="VIQ50_04870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEY9359744.1"
                     /translation="MNATGIGAAVRRKEDQRFVTGKGHYTDDVNRPGQCHAYFLRSPH
                     AHARIKSVETKAAAAMPGVLAVLTGAELAADKIGNLICGWMITSKDGSQMKMAPHPAI
                     AHGKANYVGDAVAVVVAETLAQAKDAGEKVNVEYELLPALADPAKAQSESAPQIHEVA
                     ARNTIYQWHLGDAKAAEAAFKSARHVTRLDLINNRLVPNAIEPRAAIGEYDAGSGSLT
                     LWNTTQNPHVARLVMSAFVGLAPEHKLRVIAPDVGGGFGSKIFIYPEEVVCLWAARKI
                     GRPVKWVAERSEAFLTDAHGRDHVTHAEMAFDAQGKVTALRVKTIANLGAYMSTFSSS
                     VPTYLYGTLLSGQYEIPAIYCEVDAVYTNTVPVDAYRGAGRPEATFVVERLIEVGGRE
                     MGIDPTDLRKKNFIKKFPYQTPVIMTYDAGDYHASLKKALEIADYDGFGKRKRESARH
                     DKLRGIGFSTYIEACGIAPSQAVGSLGCGVGLWESAEVRVNPTGTVEVLTGCHQHGQG
                     HETTFAQVVSERLGIPLDNVSVVHGDTDKVQFGMGTYGSRSGAVGISAIVKALDKIEA
                     KAKKVAAYMLEAAEGDIVFQDGKFTVAGTDKSAAWGDVALNAYIAHKFAGQELEPGLK
                     ETSFYDPTNFTFPAGCHICEVEVDRDTGKTEIVNWTAVDDFGTVVNPMIVEGQVHGGI
                     AQGIGQALLERAVYDQDGQLVTGSLMDYCMPHAHDLPSFKVGLTETKAPSNPLGIKGC
                     GEAGAIASPAAVINAITDAIGMEELAMPATSQVVWAALKRAQPSQAA"
     gene            complement(2662..3153)
                     /locus_tag="VIQ50_04875"
     CDS             complement(2662..3153)
                     /locus_tag="VIQ50_04875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEY9359745.1"
                     /translation="MTTVALTVNGKAVTGDVDPRTLLVQFLRENLRLTGTHVGCDTSQ
                     CGACVVHVDGKAVKSCTVFVWQVEGANVMTIEGLADPNGPLHPMQEAFREHHGLQCGY
                     CTPGMIMTAVDMVNRKGHELDDPTIRHELEGNLCRCTGYHNIVKAIAAGAKAMKGHVQ
                     QQT"
BASE COUNT          556 a         1049 c         1027 g          650 t
ORIGIN      
        1 gcacgggcga attggccgca tcggcgtgcc gcgtcatggc tccgatcacg atggatcggc
       61 ccttctgctc gacgccgctc aaaccctcga ccagcgagag atcgatcaat gcagaaggat
      121 tagccaatcg cagcttcatg accggcaaga gcgaatgccc acccgccagc agcttggctt
      181 ccggattgcg cgtgagcagg ccagccgcct gtcgaaccgt tgtcggacga tggaaagtaa
      241 aattgtacat cgatctctcc cgcgaaatta cgctgcttga cttggttgcg cgcgcttgag
      301 cgcagcccac acgacctgcg acgtggctgg cattgccagt tcttccattc caatcgcatc
      361 ggtaatggca tttatgaccg ctgctggtga ggcgatcgcg cccgcctcgc cacagccctt
      421 gatgccgagc gggtttgaag gtgccttggt ttcggtcaga ccgaccttga acgacggaag
      481 gtcgtgggca tgcggcatgc agtaatccat cagagatccg gtcaccagct gaccgtcttg
      541 atcgtatacc gcgcgttcga gaagggcctg cccaattccc tgcgcaatgc cgccatgcac
      601 ctgaccttca acgatcatcg gattgacgac ggtgccgaag tcatcgaccg ccgtccagtt
      661 gacgatctcg gttttgccgg tgtcgcgatc gacttccact tcacagatgt ggcagccggc
      721 ggggaaagtg aaattggtcg gatcgtagaa actcgtctcc tttaacccag gctcgagctc
      781 ctggccggca aatttgtgcg cgatataggc attgagcgcg acgtcgcccc aagccgccga
      841 tttgtcggtg cctgcgacgg tgaacttgcc gtcctggaat acgatgtcgc cctcggccgc
      901 ttcgagcata tacgcggcga ccttcttcgc cttcgcctcg atcttgtcga gcgccttcac
      961 gatcgcggag atgccgaccg cacccgagcg ggagccatag gtccccatgc cgaactgcac
     1021 cttgtcggtg tcgccgtgca cgacgctgac gttgtcgagc gggatgccga gccgttcgga
     1081 gacgacctgc gcgaaggtcg tctcgtggcc ttgcccgtgc tggtgacagc cggtgaggac
     1141 ttcgaccgtg ccggtaggat tgacgcgcac ctcggccgat tcccacaggc cgacgccgca
     1201 gccgagcgag ccgacggcct ggctcggcgc aatgccgcag gcctcgatat aggtcgaaaa
     1261 gccgatgccg cgcagcttgt catggcgggc ggactcacgc ttgcgcttgc cgaagccgtc
     1321 atagtcggcg atctccagcg ccttcttgag cgaggcgtga tagtcgccgg catcgtaggt
     1381 catgatcacc ggcgtctgat acgggaactt cttgatgaag ttcttcttgc gcagatcggt
     1441 cggatcgatg cccatctcgc ggccgccgac ctcgatcagg cgctcaacca cgaaggtcgc
     1501 ttccggccgc cccgcgccgc gataggcgtc gaccggcacg gtgttggtgt agaccgcatc
     1561 cacctcgcaa tagatcgccg ggatttcgta ctggcccgat agcaacgtgc cgtagagata
     1621 ggtcggcacc gaggaggaaa acgtcgacat ataggcgccg agattggcga tggtcttcac
     1681 gcgcagcgcc gtgactttgc cctgggcatc gaatgccatc tccgcgtgcg tgacatggtc
     1741 gcgcccgtgc gcgtcggtga ggaaggcctc cgagcgctcc gccacccatt tcaccggccg
     1801 accgattttg cgcgccgccc acaggcagac gacctcctcc ggatagatga aaatcttcga
     1861 accgaagccg ccacccacgt cgggcgcgat cactcgcagc ttgtgctcgg gcgcgagacc
     1921 gacgaaagcg gacatcacca ggcgcgcgac atgcgggttc tgcgtcgtgt tccacagcgt
     1981 caggctgccg gagccggcat cgtattcgcc gatggcggcg cgcggctcga ttgcattcgg
     2041 aacaaggcgg ttgttgatga gatccagcct ggtgacgtgc cttgccgact tgaacgcggc
     2101 ctcggctgcc ttggcgtcgc cgaggtgcca ttggtagatg gtattgcgcg cggcgacttc
     2161 gtggatctgc ggggcgctct cgctctgcgc cttggcggga tcggccagcg ccggcaacag
     2221 ctcgtattcg acgttgacct tctcgccggc gtctttcgcc tgggccaacg tctcggcgac
     2281 gacgacggca accgcgtcac cgacgtaatt cgccttgccg tgggcgatcg ccgggtgcgg
     2341 cgccatcttc atttgcgagc cgtccttgga cgtgatcatc cagccgcaaa tgagattgcc
     2401 gatcttgtcg gcggcaagct cggccccggt gagcaccgcg agcacgcccg gcatcgccgc
     2461 ggctgccttg gtctcaacgc tcttgatcct ggcatgggca tggggcgagc gcaggaaata
     2521 tgcgtggcac tggccgggac ggttgacgtc gtcggtgtag tggcccttgc ccgtcacgaa
     2581 gcgttgatcc tctttgcggc ggaccgccgc gccgattccc gtcgcgttca tggcgatctc
     2641 ctcctgaggc ccgcgctccg gtcaagtttg ctgctgcacg tgtcctttca tcgccttggc
     2701 gccggccgcg atggccttca cgatgttatg gtagccagtg cagcgacaga gattgccctc
     2761 gagctcgtgg cgaatggtgg gatcgtcgag ctcgtggccc ttgcgattga ccatgtcgac
     2821 cgcggtcatg atcatgcccg gagtgcaata gccgcattgc aatccgtgat gttcgcggaa
     2881 cgcctcctgc atcgggtgga gcggcccgtt cggatcggca agtccctcga tggtcatgac
     2941 gttcgctccc tcgacctgcc agacgaacac ggtgcaggat ttgaccgcct tgccgtcgac
     3001 gtgcaccacg caggcgccgc actgcgatgt gtcgcagccc acgtgggtgc cggtcagccg
     3061 caggttctcg cgcaggaatt gcaccagaag cgtgcgcgga tcgacgtcac cggtgacggc
     3121 tttgccgttc accgtcaatg cgacggtggt catggcttcc tcctcgaaat catttttcgc
     3181 accggccggc gaaaccggcg gcggatcggg cctaaatcgc ggcgattctg ccctgggacg
     3241 cacattcgga caagtcgact ctgaacctgc ggcgcaccgc cg
//
LOCUS       DATCWM010000254         4340 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_223475, whole genome shotgun sequence.
ACCESSION   DATCWM010000254 DATCWM010000000
VERSION     DATCWM010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4340)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4340)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4340
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_223475"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..303)
                     /locus_tag="VIQ50_04880"
     CDS             complement(<1..303)
                     /locus_tag="VIQ50_04880"
                     /inference="COORDINATES: protein motif:HMM:NF021510.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2237 family protein"
                     /protein_id="HEY9359746.1"
                     /translation="MRVRAICRAVLPKSRGSVAEATLSVIEAVAHVTSRRQKMLVSHK
                     TGAGAETAQGEKMLRDDRGHGGGRPSTPRNVLGERLEVCSMSPMTGFFRDGCCDTGQ"
     gene            399..974
                     /locus_tag="VIQ50_04885"
     CDS             399..974
                     /locus_tag="VIQ50_04885"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007614485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEY9359747.1"
                     /translation="MFARFLAGGACAVGLLASLCATQAAAHPYDRYAGGGRSFFVSLF
                     GPSIARGVVSYPTNQKPGTIIVSTAQRRLYLVLGNGQALSYAIGVGKAGFAWSGVTQI
                     TDKREWPDWTPPEQMLRRRPDLPHHMAGGPDNPMGARGIYLGASLYRIHGSNEPDSIG
                     QASSSGCIRMTNQDVIDLYSRVQIGATVIVQ"
     gene            complement(1034..1399)
                     /locus_tag="VIQ50_04890"
     CDS             complement(1034..1399)
                     /locus_tag="VIQ50_04890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008192003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HEY9359748.1"
                     /translation="MSDAASKPWPTELRLHKDRRTLMMTFDNGETFDLSAEYLRVKSP
                     SAEVQGHSPDERKTVAGKKDVAILEVHPIGNYAARLVFDDMHSTGIYSWDYFLELGRM
                     RDAYWQDYLDELAGKGLKR"
     gene            1820..3904
                     /locus_tag="VIQ50_04895"
     CDS             1820..3904
                     /locus_tag="VIQ50_04895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007759285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEY9359749.1"
                     /translation="MDMIGGELAFMAASAGKAFLTLMEPHRLMFLGLGCIMGLVLGII
                     PGIGGLTGTAMLLPFTFNMDPYSAFALLLGLGATTATGDPIPAILFGVPGGAASAATV
                     LDGYPMAKKGEAGRALSAAYMSSLMGGVFGALLMAISIPILRPVMLFIGSPELLAFSV
                     LGISMVAVLSGNAPLRGITAGCLGVMIAMIGTDPQTGTLRWTFDSLYLWDGLPLTPLL
                     LGVFALPELCDLLIARLAISADTGNANIYKGQWQGVKDCFAHWWLIMRCSWIGGGIGS
                     IPGISASVVDWLAYGHALKTEKGASATFGKGDVRGVIASESSNNAKEGGALVPTVAFG
                     VPGSATMAILLGAFLIHGLVPGPDMLTKNLSITYAMVWSVALANVLGAGLCYAFSPQF
                     AKLATLRYTLILPAVLGIIYIGAFEATRQWGDLFTLLFFGLIGWTMKQFKWPRPPLIL
                     GVVLGDTIERYLFISIERYGLSWMLRPVVVLLFALAILGLVRPFLQDIRSQGGVRKML
                     TSFQRPTFHPSQLFTMFMIAVIGAALATSLRWDFSAKIVPLVVGTVALCAAALSLFNE
                     LCRKPAAAGAEGLAEHAQHEVGEKIHMDLTSDTGHLPVREIVGRAALFFGYLIGFMAM
                     MAVIGLIPTVGLFVVFFMRYEAKERWPLVIPYAVVLVLFIWLAFDYFMAVPWPPTLIG
                     EWFPMLKAIPSV"
BASE COUNT          699 a         1397 c         1356 g          888 t
ORIGIN      
        1 ctgccctgta tcgcagcagc cgtcacgaaa gaagccggtc atggggctca tcgagcagac
       61 ttcgagccgc tcccccaaca cgttgcgcgg cgtgctcggc cggccgcctc cgtggcccct
      121 atcgtccctc agcatcttct ctccctgcgc cgtctcggca ccggctcccg tcttgtgcga
      181 cactagcatt ttttggcggc gggacgtgac gtgcgcgacc gcttcaatca ctgataatgt
      241 cgcttctgcg acgctgccgc ggcttttcgg caacactgcg cggcaaattg cgcgcacgcg
      301 catcggaacg gtcgacagcc gccgcgctgt ttgtagacta tcaacctcac aggttcgagc
      361 ttcaaagatt ctgcgctcga tgatgcgggg ggttcgtcat gtttgcacgc ttccttgccg
      421 gcggcgcgtg cgccgtcggg ctgctcgcta gcctctgtgc cacgcaggcc gcagcccatc
      481 cgtacgaccg ctatgccggc ggcggccgct cgtttttcgt gagcttattc ggtccctcga
      541 tcgcccgcgg ggtggtgagc tatcccacca atcagaagcc cggcaccatc atagtcagca
      601 cggcgcagcg ccggctctac ctcgtgctcg gcaacgggca ggcgctgagc tatgcgatcg
      661 gggtcggtaa ggcgggcttc gcatggagcg gggtgacgca gatcaccgac aagcgcgagt
      721 ggccggattg gacgccgccc gagcagatgc tgcggcgccg tcccgacctg ccgcaccata
      781 tggccggcgg ccccgacaat cccatggggg cgcgcggaat ctatctcggc gccagcctct
      841 accgcattca cggctcgaac gagccggact cgatcggcca ggcgtcgtcg tcgggatgca
      901 tccgcatgac caatcaggac gtcatcgatc tctacagccg cgtgcagatc ggcgcgaccg
      961 tgatcgtgca gtagcggata aggggggcgc ggtgcacggt gtcgcgggcg cgtcatccag
     1021 tccgcgcgcc gcgtcaacgc ttgaggcctt tgccggccag ctcgtcgaga tagtcctgcc
     1081 agtaggcgtc ccgcatgcgg ccgagctcga gaaagtaatc ccagctgtag atgccggtcg
     1141 aatgcatgtc gtcgaagacg agccgtgccg cgtaattgcc gatcggatgc acttcgagaa
     1201 tggcgacgtc cttcttgccg gcgacggtct tacgctcgtc cggtgaatgg ccttgcactt
     1261 ccgcacttgg gctcttgacg cgcaaatatt cggcgctcag gtcaaatgtc tcgccgttgt
     1321 cgaatgtcat catcagcgtc ctgcggtcct tgtgcaagcg cagttcggtt ggccaaggct
     1381 tcgacgctgc atcactcatg tccgtctcct ggctcaagac tggagccgag gctagaccac
     1441 gtcggcgccg ctcgatagct cccgccacca ccgcagggaa cgcccaaacg gagcaaccgg
     1501 ctttcccgtc attcgatgtt ctgcttacat ggcccgcaaa ataatcgagc cgccgcgggg
     1561 gtgcggaggc tgggcgtcgc aggcgccgcc gtcacagcag gatgggcggg cttgctcacg
     1621 gccgccgaag cttcagcgaa ggcaggcgaa ttcggggagg ggcgacagtc aggcgcaacg
     1681 cgatccggcg gggtgcacgc tttcattgcg aatgggttga tctgacccgg cacggtcgca
     1741 tgcggggtcg aacgcgctgg tgtgaatcgc acccatcccc aggcatgcgc gcgtgggggt
     1801 ctcgaggagg ccgaaacgga tggacatgat cggaggagag ctcgccttca tggccgcctc
     1861 cgcgggcaag gcgttcctca ccctgatgga gccccatcgc ctgatgttcc tcgggctcgg
     1921 ctgcatcatg ggcctggttc tgggcatcat tcccggcatt ggcgggctca ccggaacggc
     1981 aatgctgctg ccgttcacct tcaacatgga tccttactcc gccttcgcgc tgctgctcgg
     2041 tctcggcgca acgaccgcca cgggtgatcc tattccagcg atcctgttcg gcgtgcccgg
     2101 aggtgccgcc tccgcggcca ccgtgctcga cggctacccg atggcgaaga agggcgaggc
     2161 cggacgcgcg ctcagcgccg cctacatgtc ctcgctgatg ggaggcgtct tcggcgcgct
     2221 gttgatggcc atcagcattc cgattttgcg cccagtgatg ctgttcatcg gatcgccgga
     2281 attgctcgct ttttccgtgc tcggcatttc catggtcgcg gtcttgtccg gcaatgcgcc
     2341 gctgcgcgga attaccgccg gctgtctagg cgtgatgatc gcgatgatcg gcacggaccc
     2401 gcagaccggc acgctgcgct ggaccttcga cagtctctac ctctgggatg gcttgccgct
     2461 cacgccgctg ttgctcgggg tgttcgcgct gccggagctg tgcgacctgt tgatcgcccg
     2521 cctcgccatt tcggccgata cgggaaacgc caacatctac aaaggccaat ggcaaggcgt
     2581 gaaggactgc ttcgcccact ggtggctgat catgcggtgc tcgtggatcg gcggcggcat
     2641 cggctccatt cccgggatca gcgcatccgt cgtcgactgg ctcgcctacg gccatgcgct
     2701 caagaccgag aagggtgcga gcgcgacatt cggcaagggc gacgtgcgcg gcgtgatcgc
     2761 gtcggaaagc tcaaataacg caaaggaggg tggcgccctc gttcccaccg tcgccttcgg
     2821 cgtgccgggc agcgccacca tggcgatcct tctcggcgcg ttcttgattc acggcctggt
     2881 gcctggtccc gacatgctga ctaagaatct cagcataacc tacgcgatgg tgtggtcggt
     2941 ggctttggca aacgtgttgg gcgcgggcct gtgctacgcg ttcagtccgc aattcgccaa
     3001 gctcgcgaca ctgcgttaca cgctaatcct gccggccgtc ctcggcatca tctacatcgg
     3061 cgcgttcgag gcgacccgcc aatggggcga tctttttact ttgctatttt tcgggttgat
     3121 cggctggacc atgaagcagt tcaaatggcc ccgccctccg ctcattctgg gcgtcgtact
     3181 gggcgacacc atcgagcgtt atctgttcat atcgatcgag cggtacggat tgagctggat
     3241 gcttcggccg gtcgtggtgc tgctgttcgc tctcgccatt ctcggcctcg tgcggccgtt
     3301 tttgcaggat atccgcagcc aaggcggcgt aagaaaaatg ctgaccagct ttcagcggcc
     3361 gacatttcat ccctcgcaac tgttcaccat gttcatgatt gccgtcatcg gcgcggcgct
     3421 cgcgacctcg ctgcgctggg atttcagcgc caagatcgtg ccgctggtcg tgggcaccgt
     3481 cgccttgtgt gcggcggcgc tcagcctgtt caacgaactg tgccggaagc cggcagccgc
     3541 cggcgcggaa gggctggccg aacatgccca gcatgaggtg ggcgaaaaga tccatatgga
     3601 tctcacctcc gataccggcc atctgcccgt gcgcgagatc gtcgggcgcg cggctttgtt
     3661 cttcggttat ctcatcggtt tcatggcgat gatggcggtc atcggactca ttccgaccgt
     3721 ggggctgttc gtcgtcttct tcatgcgcta cgaggccaaa gagcgctggc cgctcgtcat
     3781 cccctatgcc gtcgtgctcg tcctcttcat ctggttagcg ttcgattact tcatggccgt
     3841 tccctggccg cccaccctga ttggtgagtg gttcccgatg ctgaaggcaa ttccatcggt
     3901 gtagtagaga gcctggccgc cgcgcccgcg gtccggccgt cggccgcaat gcctaaagcg
     3961 gtttgcggcg cggcagctgc gccccgcgcg cgataatttc gccggcgcgc attccgaaac
     4021 gccggaaatc gacaggggcg atctcgccgc tttgctcgaa gagtgcggcg atgacgggct
     4081 tggggtccga gctggaccgc cgttgctctc gatgcctttc cttttccttc ggcatgctcg
     4141 tcacggaaca ccaaatgttc cccgttcatc taactaacta acagaggccg gcgggagttc
     4201 ccaaaccgac gcgggcgcta cgtagttcca aacacattcc tcatcgaagc cggctggaac
     4261 ttggtgcgta gaaatttcgt caaaacgccg ccgcgctcac gagcgcgcga aatatggcat
     4321 cacttcgcgt gcgaacagac
//
LOCUS       DATCWM010000255         2097 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_282850, whole genome shotgun sequence.
ACCESSION   DATCWM010000255 DATCWM010000000
VERSION     DATCWM010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2097
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_282850"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1364)
                     /locus_tag="VIQ50_04900"
     CDS             complement(<1..1364)
                     /locus_tag="VIQ50_04900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359750.1"
                     /translation="MRIARVIAASAAIALSSVDAFGESPQIAAVSGRDQLALYDLATG
                     TELTRFDAPGGSSDLLALGSGIALSNHTAGNEVVLIDLNQRKEINRLPSSSLGGVRPV
                     HMYLSPAIEGRQYAVVLNDGNERATPKGERPKDSTLLLIDAVQSSPMFLKPVGETRLG
                     IGHHKVGFSMKRPRLAVSNISDCSDVVSVFDYQNPSDIKLVKRFSAADLGYDGSTPLK
                     TCDETGKLGVMLSPHGTGTSAATGRVYHFLTGTGQIAAFDIDADVPTVKLMQTAGTGG
                     ASVKDLPGGRFMVVPQRGPREVHQRADGSVCQVGQLAVIDAVGEKVAAQVPVFYEATC
                     RSSILGTPHERAALQYAMPAPDGKTVFVEIGTLYGPPNVPAESRFVAVFDLTDPYRPV
                     QLPSIPVGAGNDTREHALVGDGTLLVVTNSLEDSVSVIDVRSRQVVRTIPTVTRPYRV
                     VSFS"
     gene            complement(1409..1894)
                     /locus_tag="VIQ50_04905"
     CDS             complement(1409..1894)
                     /locus_tag="VIQ50_04905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010911588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016531 - copper chaperone activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HEY9359751.1"
                     /translation="MRPIVFAFAAAVGLAVSAGNAAEYKAGSLEISDPWSRATPKGSS
                     VAAGYMTIKNSGSTPDRLVSGSSDLAPKFEVHEMKMEDGIAKMRPVKGGLEIKPGETV
                     ELKPGSFHVMFVGLKKPLSAGDQFKATLVFEKAGSVNIDYDVRAMGSQPGGAMPGMKK
                     H"
BASE COUNT          389 a          651 c          674 g          383 t
ORIGIN      
        1 ttggaaaagg agacgacgcg gtatggtctg gtgaccgtcg ggatcgtgcg cacgacctgc
       61 cgcgatcgga cgtcgatgac cgaaaccgag tcttccaaac tgttggtgac cacaagcagc
      121 gtgccatcgc cgaccagggc gtgctctcgg gtatcattgc cggcgccaac cggaatcgag
      181 ggcagttgca ccggcctgta cgggtcggtc aggtcgaaca cggcaacgaa gcgggattcc
      241 gccggcacgt tcggcggccc gtagagcgtg ccgatctcga cgaagaccgt tttcccgtca
      301 ggcgccggca tcgcgtattg cagcgctgcg cgttcatgcg gcgtgcccaa aatcgagctg
      361 cgacaggtcg cctcgtaaaa caccggcact tgcgcggcga ccttttcgcc aacggcgtcg
      421 atgaccgcca attgcccgac ctggcaaacc gatccatcgg ctctttgatg cacttcgcgc
      481 gggccgcgct gcggcaccac catgaagcgg ccgccgggca ggtccttgac cgaggctccg
      541 ccggttccgg ccgtctgcat cagctttacc gtcggcacgt cggcgtcgat gtcgaatgcg
      601 gcgatctggc cggttccggt gaggaaatga tagacgcgtc cggttgccgc cgatgtgccg
      661 gtgccgtgcg gcgacagcat cacgcccagc ttgccggtct cgtcgcaggt cttgagcggg
      721 gtcgagccgt cgtatccgag gtcggctgct gaaaacctct taacgagctt gatgtcggaa
      781 ggattctggt aatcaaagac ggaaaccaca tccgagcaat cggaaatgtt ggagaccgcc
      841 aagcgcggcc gcttcatgga gaagccgacc ttgtgatggc cgatgccgag gcgcgtctca
      901 ccgaccggct tcaaaaacat cggactcgat tgcaccgcgt cgatcagcag caacgtggaa
      961 tccttcgggc gctcgccctt gggcgtggcg cgctcgttgc cgtcgttgag aacgacggcg
     1021 tactgccgtc cctcgatggc cgggctcaga tacatgtgaa cgggacgcac gcccccgagc
     1081 gaagacgatg gcagccggtt aatttctttg cgctggttca agtcgatgag cacgacttca
     1141 ttgccggcgg tatggttcga cagcgcgatc ccgctgccca gcgcgaggag atcgctcgat
     1201 cctcccggag catcgaatcg ggtgagctcc gtgccggtcg caagatcgta caaggcgagc
     1261 tgatcgcgcc cggagacggc ggcgatctga ggggactctc cgaacgcgtc gacagatgac
     1321 agagctatgg ccgcactcgc ggcaatcact cgagcgatgc gcatggcaac ctccgcaaga
     1381 tgaccgatgt tcgactggag ccgcgtgatc aatgcttctt catgccaggc atggcgccgc
     1441 ctggttgtga gcccatcgcg cgcacgtcgt agtcgatgtt cacgctgccg gccttttcga
     1501 agacgagcgt cgccttgaac tggtcgcccg cgctgagcgg ttttttcagg ccgacaaaca
     1561 tgacgtggaa cgaaccgggc ttgagctcga ccgtctctcc gggcttgatt tccaatccgc
     1621 ctttcaccgg ccgcattttg gcgatgccgt cctccatctt catctcatga acttcgaatt
     1681 tgggcgcgag gtccgacgat ccgctgacca gccgatcggg cgtcgatccg ctgttcttga
     1741 tcgtcatgta gccggcggca acgctcgatc ctttcggcgt ggcgcgcgac catggatcgg
     1801 aaatctcgag cgagccggcc ttgtactcgg ccgcgttccc agcgctgacg gccaagccga
     1861 ccgccgcggc gaaggcgaaa acgatagggc gcatttctag cctcctgatc aaaatggaat
     1921 ggccggccgc ggatctaact gcggccgaca tgcacgagga gcgccgcagg cgctcggatc
     1981 aggagaaaat cggaggcgcg cgcgatgcgt gcggttgatg ccgcggtcgc aatgtcagcg
     2041 gtgcggccaa gaccgcgaga cggtctggcg tccgcgaaaa gcgaaccggc gagaacg
//
LOCUS       DATCWM010000256         3198 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_175105, whole genome shotgun sequence.
ACCESSION   DATCWM010000256 DATCWM010000000
VERSION     DATCWM010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3198)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3198)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3198
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175105"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..286)
                     /locus_tag="VIQ50_04910"
     CDS             complement(<1..286)
                     /locus_tag="VIQ50_04910"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY9359752.1"
                     /translation="MSWQLASLLLLGGSTVLLFIGLPVAFSFMAINIVGAILFLGGDA
                     GLSQMLRNSAAAVINFSLTPIPLFVLMGEVLFHTGLALKVIDGIERLVRQV"
     gene            complement(355..870)
                     /locus_tag="VIQ50_04915"
     CDS             complement(355..870)
                     /locus_tag="VIQ50_04915"
                     /inference="COORDINATES: protein motif:HMM:NF016200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HEY9359753.1"
                     /translation="MARLSYWYDRLLEALMLLACLLLLTMTFLIGADVLLRNIGLGGV
                     APSNEISEDIIYLLTLLAAPRLLRQGQHIRIDIVLRALPPRLGWLLEWISDVIGVICC
                     LYFVWYGTRVVAASFASGALSIKTLIIPEWWLLAPMPASFVLLSIEFFFRMHRLALAE
                     QRPRDDAVSAS"
     gene            complement(908..1873)
                     /gene="dctP"
                     /locus_tag="VIQ50_04920"
     CDS             complement(908..1873)
                     /gene="dctP"
                     /locus_tag="VIQ50_04920"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein DctP"
                     /protein_id="HEY9359754.1"
                     /translation="MRPTLIMGLAAVLATTTAAAQEVTLRAVSAFAEKTTYSRGFELF
                     IERVNRDGKGVLQINYIGGPKAMPPFEVGNALKSGVVDVANSTGAFYTNVMPEADAWK
                     LTERPMSELRKNGGYDYMAQLYAEKMNAIFLARHVDGNPFHLYLNKPISSPDLTGLKI
                     RITPVYRDFFQALGATVVQTAPGEVYTALERGVVDGYGWPITGIFDLGWHEKTKYRVD
                     PGFYTAEVSILVNKSTWDRLTDAQRDLLRKAGEQAEADAVAIFAEENAKDTKRQAEAG
                     IQTIKLEGAAGKLYRDKAYEAGWAGVIRQSPQHGEKMKEFFAKAN"
     gene            2006..>3198
                     /locus_tag="VIQ50_04925"
     CDS             2006..>3198
                     /locus_tag="VIQ50_04925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018701126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indolepyruvate ferredoxin oxidoreductase"
                     /protein_id="HEY9359755.1"
                     /translation="MAERSFKSEVAKLRLGAGQEFRGEGILAVTKALLQSGVSYVSGY
                     QGAPISHLVDVLADADDVLRELGIRFEASANEAAAAAALAASINYPLRGAATFKSTVG
                     TNVASDALANLASSGVTGGALIIVGEDYGEGSSIMQERSHAFAMKSQIWLLDPRPNLP
                     KIVEMVEQGFELSEASSTPVMLELRIRACHVQGSFKTKSNRESLYSKKNQFQAPDFDY
                     GRICLPPATYAQEKHKIDVRWPAAVSFIKDKKLNEFFAGEMSDVGIICQGGMYNAVIR
                     ALQTLGLADVFGVSRVPIYCMNVTYPMIPDEIVGFCSGKKEVLVVEEGQPAFIEEQVL
                     ATLRRYGSNDVKLRGKDVLPMAGEYTGEVVLAGIAKFLGRSPFMDPILSLKKKAADLL
                     GALPAR"
BASE COUNT          633 a          985 c         1001 g          579 t
ORIGIN      
        1 gcacctgacg aaccaggcgc tcgattccgt cgatcacctt gagcgcgagc ccggtatgga
       61 agagcacttc gcccatcagc acgaacagcg gaattggcgt cagcgagaaa ttgatgacag
      121 ccgccgcgct gttcctgagc atttggctca ggccggcatc gccgccgaga aacaagatcg
      181 ccccgacgat gttgatcgcc atgaaagaga aggcgaccgg caggccgatg aacaaaagca
      241 ccgtggagcc gccgagaagc aggagcgagg cgagctgcca agacatatcg ggctcccttt
      301 aagcgtcccg attgcgaaat tcgcacacgc ttgcggcgct ccccgattcg cgcgctagga
      361 agcggacacc gcatcgtccc gcggacgctg ctcggccaga gcaaggcgat gcatgcgaaa
      421 gaaaaactcg atgctgagca gcacgaagct tgccggcatc ggcgcgagca gccaccactc
      481 cgggatgatc agcgtcttga tcgaaagcgc gccgctcgcg aagcttgccg ccaccacccg
      541 cgttccgtac cagacgaaat agaggcagca aatcacgccg ataacgtcgc tgatccattc
      601 gagcagccag ccgagcctcg gaggcagcgc gcgcagcaca atgtcgatgc ggatgtgctg
      661 gccttgccgc aacaggcggg gtgcggcaag gagcgtcaac agatagatga tgtcctcgga
      721 gatctcgttg ctcggcgcga cgccgccgag gccgatattg cgcagcagca catcggcacc
      781 gatgaggaag gtcatcgtca gtagcagcaa gcacgccagc agcatcagcg cttcgagtag
      841 ccgatcgtac cagtatgaca gcctcgccat gcccggacgc cgatcgccag atcaattcgc
      901 cttcacgtca attcgccttg gcgaaaaact ccttcatctt ttcaccgtgt tgcgggcttt
      961 ggcggatcac cccggcccag ccggcttcgt aggctttgtc gcgatagagc ttcccggcgg
     1021 cgccctcgag cttgatcgtc tggatgccgg cctcagcctg gcgtttggtg tccttggcgt
     1081 tttcttcggc gaaaatcgca accgcgtcag cttccgcctg ctctcccgcc ttgcgcagca
     1141 ggtcgcgctg cgcgtcggtg agcctgtccc aggtggattt gttcaccagg atggacactt
     1201 cggcggtata gaagccggga tcgacgcggt atttcgtctt ctcgtgccag ccgagatcga
     1261 agatgccggt aatcggccag ccgtagccgt caaccactcc ccgctccagc gcggtataaa
     1321 cctcgccggg cgcggtctgg acgaccgtgg ctccgagcgc ctggaaaaaa tcgcgataga
     1381 ccggcgtaat gcgaatcttg aggccggtga gatccgggct cgagatcggc ttgttcagat
     1441 agaggtgaaa cggatttccg tcgacgtgcc gcgcgaggaa gatcgcattc atcttttccg
     1501 catacagctg cgccatgtag tcgtagccgc cgttcttgcg cagctccgac atcggccgtt
     1561 cggtgagctt ccaggcgtcg gcttcgggca tcacgttggt gtagaacgcc ccggtcgaat
     1621 tcgcgacatc gacgacgccg gatttgagcg cgttgccgac ctcgaacggc ggcatggctt
     1681 tcggtccgcc gatgtaattg atctgcagga cgcccttgcc gtcccgattc acccgctcga
     1741 tgaagagctc gaagccgcgc gaataggtgg tcttttcggc gaaggcggaa accgcgcgca
     1801 gggtgacttc ctgggccgcc gccgttgttg tcgcgaggac ggccgctaaa cccatgatta
     1861 atgtcgggcg catgattgtc cctctaggat gaatggaaag gctgtcggcg atacattgtt
     1921 ttgaatataa tcgcggtggc atagaggtga gtcaattgcg cgcctttacg cacggactcg
     1981 tagcggagca cgcaaagaga cggggatggc agaacggtcg ttcaaaagcg aggtggcaaa
     2041 gcttcggcta ggcgccggcc aggaattccg cggcgaggga attctcgccg tcaccaaggc
     2101 gttgctgcag tcgggagtgt cctacgtctc cggctaccag ggcgcgccga tctcgcacct
     2161 cgtcgacgtg ctcgccgatg ccgatgacgt gctgcgcgag ctcggcattc gcttcgaggc
     2221 aagcgccaac gaggccgcgg ccgccgcggc gctggccgca tcgatcaatt atccgctgcg
     2281 cggggccgcg accttcaaat cgacggtcgg caccaacgtc gcctccgacg cgctcgccaa
     2341 tcttgcctcc agcggcgtga ccggcggcgc gttgatcatc gtcggcgagg actatggcga
     2401 aggctcctcg atcatgcagg agcgcagcca cgccttcgcc atgaagtcgc agatctggct
     2461 cctcgatccg cgccccaacc tgccgaagat cgtcgagatg gtcgagcagg gcttcgagct
     2521 atcggaggcc tccagcacgc cggtgatgct cgagctgcgc atccgcgcct gccacgtgca
     2581 gggcagcttc aagacgaaga gcaaccggga aagcctctat tccaagaaaa atcaatttca
     2641 ggctccggac ttcgactacg gccgcatctg cctgccgccg gccacctatg cgcaggaaaa
     2701 gcacaagatc gacgtgcgct ggcctgccgc cgtttctttc ataaaagata aaaagctgaa
     2761 tgagttcttc gcgggagaaa tgagcgacgt cggcatcatc tgccagggcg gcatgtacaa
     2821 cgcggtgatc cgcgcgctgc agacgctggg gctggcggac gtgttcggcg tctcgcgcgt
     2881 gccgatctac tgcatgaacg tgacctaccc gatgattccg gacgagatcg tcgggttctg
     2941 cagcgggaag aaggaagtgc tggtggtcga agaaggccag cccgccttca tcgaggagca
     3001 ggtgctcgcc accttgcggc gctacggctc aaatgacgtg aagctgcgcg gcaaggacgt
     3061 gctgccgatg gccggcgagt acacgggcga ggtggtgctg gccggaatcg ccaagttcct
     3121 cggccgctca ccgttcatgg atccgattct ttcgctgaag aaaaaagccg cggacctcct
     3181 cggcgcgctg ccggcgcg
//
LOCUS       DATCWM010000257         2206 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_428760, whole genome shotgun sequence.
ACCESSION   DATCWM010000257 DATCWM010000000
VERSION     DATCWM010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2206
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_428760"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            138..1463
                     /locus_tag="VIQ50_04930"
     CDS             138..1463
                     /locus_tag="VIQ50_04930"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 87 protein"
                     /protein_id="HEY9359756.1"
                     /translation="MKRVAGLDWPLLVLAGCLLAISAAGAATVDRFDDPKIGVFLLLQ
                     SVPYAIATWLVLRGAADGFASGRALATILLVGVAMRCLLLPGTPVSNDLFRYIWDGRV
                     QAAGINPYLHVPSEEVLTPLRDSAIYPYINRADYAPTIYPPTSQIVFYLVTRISEAPI
                     AMKATMLAFEGLAVWAMLRLLALRGLPRSRILLYAWHPLPLWEFARSGHVDVIAIAFL
                     LLAFLAAERRSPILAGIAFGAGALVKYFPLVTAPALYRRWDWRFPVAFIATIAALYLP
                     YIGAGAKVFGFLGSYISEEGLDRGSGIFLWQLLGAMVALPQQAFAVYVLGAATVMAAL
                     ALFVLMRPRTTGSDLAGGMLLAVAFTLLASPHYAWYFAWLVPFLCFYPAVGVIYLTCA
                     CGALYFAQWPPTLWQAIPIYVPCILILVAEFAIRYRRKAEEAHADAVTA"
     gene            1441..>2206
                     /locus_tag="VIQ50_04935"
     CDS             1441..>2206
                     /locus_tag="VIQ50_04935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEY9359757.1"
                     /translation="MPTPLPPETKVDPRRYFESAEERRGDYAARLPVCVYLETTNRCN
                     LLCTTCPRTYAELEPPADMSWKLFVSIVDQIPNLQRAVLHGVGEPMLVRNLPRMVAYL
                     KDRGTYVLFNTNGTLLNERNGRALIAAGLDELRVSLDAANAKSFLAVRGKDYFARILR
                     NVRGFRNLQDQEGADRPRVSFWLTGLKETVAELPAFVELAAQTGVREVYLQRLVFFDD
                     DAIGLARPDQALYEQMTREEGAHLEAATELARAHGIA"
BASE COUNT          317 a          764 c          663 g          462 t
ORIGIN      
        1 ttgttcgagg ggcagtcctt cgctccagac cttcgtcccg cgcagccgcg gcatacgcgt
       61 gcgctgttcc agtcgttggt cgagagttcg gaactcaagg atcggcgcgc cctcgatgcg
      121 ttcgggaggg ccgccgagtg aagcgggtcg ccgggctcga ttggccgctc ctggtgctcg
      181 ccggctgcct gctggcgata tcggccgccg gcgcggcgac agtcgaccgc tttgacgacc
      241 ctaagatcgg cgtctttctc ctcctccaat ccgtacctta cgcaatcgcg acctggctcg
      301 tcctgcgcgg cgcggcggac ggctttgcga gcggccgagc gcttgcgacc attcttctcg
      361 tcggcgttgc catgcggtgc ctactcctgc cgggaacgcc ggtttccaac gacctcttcc
      421 gctatatctg ggacggccgg gttcaagctg ccggcatcaa tccatatctt cacgttccga
      481 gcgaggaggt gctgacgccg ctgcgcgact ccgcgatcta cccctacatc aatcgcgccg
      541 attatgcccc gacgatctat ccgccaacct ctcagatcgt gttttatctc gtcacgcgca
      601 tttccgaggc cccgatcgcc atgaaggcta ccatgctggc cttcgaaggg ctggcagtct
      661 gggcgatgct gcgactgctc gcgctgcgcg gcctgccgcg ctcgcgcatc ctgctttatg
      721 cgtggcatcc cttaccgttg tgggagttcg cgcgcagcgg ccacgtcgac gttatcgcca
      781 ttgcctttct gctgctcgcc ttcctggctg ccgaacggcg ctcgccgatc cttgccggca
      841 tcgccttcgg cgccggcgca ctggtcaagt acttccctct ggtgaccgct cccgcgctct
      901 atcggcgctg ggactggcgc tttcccgtcg ccttcatcgc cacgatcgcg gcgctctatc
      961 tcccctatat cggcgccggc gcgaaggtat tcggctttct cggcagctac atcagcgaag
     1021 agggcttgga ccgcgggtcg ggaattttcc tgtggcagct cctcggcgcg atggtcgcgc
     1081 tgccgcagca agcctttgca gtctatgtgt tgggcgcggc gaccgtcatg gcggcactcg
     1141 ccctctttgt cctcatgcgg ccgcgaacga cgggcagcga tctcgccggc ggcatgctgc
     1201 tcgcggtcgc tttcaccctc ctggcttcgc cgcattacgc ctggtacttc gcctggctgg
     1261 tgccgttcct gtgtttctat cccgccgttg gcgtgatcta tctcacctgc gcctgtggcg
     1321 cgctttactt cgcgcagtgg ccgccaaccc tgtggcaggc gatcccgatc tacgtcccgt
     1381 gcattctcat tctcgtggcg gagtttgcga tccggtaccg acgcaaagcg gaggaggcgc
     1441 atgccgacgc cgttaccgcc tgagacaaag gtcgatcccc ggcgctactt cgaaagcgcc
     1501 gaggagcggc gcggcgacta tgcggcccgc ctaccggtct gcgtctatct cgagaccaca
     1561 aaccgctgca atctcctgtg cacgacttgc ccgcgcacct acgcggagct cgagcctccc
     1621 gccgacatga gctggaagct gttcgtctcg atcgtcgacc aaattccgaa tctgcaacgc
     1681 gcggtcttgc acggcgtcgg cgaaccaatg ctggtgcgaa acctgcccag gatggtggcc
     1741 tatctcaagg accgcgggac ctacgtgctg ttcaatacca acggcacgct tctcaatgag
     1801 cggaacggcc gcgcgctcat tgccgccggc ctggatgagc ttcgcgtctc gctcgatgcc
     1861 gcaaatgcca agtcttttct ggccgtccgc ggcaaggatt attttgcccg catcctgcgg
     1921 aacgtgcgcg gctttcgcaa tctccaggac caggaaggcg cggatcggcc gcgcgtttcg
     1981 ttttggctaa ctggactcaa ggagacggtt gccgagctcc cagccttcgt cgagctggcg
     2041 gcgcaaaccg gcgtccgcga ggtctatctg cagcgcctgg tattcttcga cgacgacgcc
     2101 atcggccttg cccggcccga ccaagcgctc tacgagcaaa tgacgcgcga ggaaggcgcc
     2161 catctcgagg cggccaccga gctcgcgcgc gctcacggca tcgcct
//
LOCUS       DATCWM010000258         2004 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_342360, whole genome shotgun sequence.
ACCESSION   DATCWM010000258 DATCWM010000000
VERSION     DATCWM010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2004
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_342360"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..214)
                     /locus_tag="VIQ50_04940"
     CDS             complement(<1..214)
                     /locus_tag="VIQ50_04940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007599252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359758.1"
                     /translation="MTEKAIGLDQHRGMAAQKATDLRRLLADVEANERALRLRQDELE
                     TQLVAAPAASWPEAAEKARYLLNLFAN"
     gene            779..1978
                     /locus_tag="VIQ50_04945"
     CDS             779..1978
                     /locus_tag="VIQ50_04945"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY9359759.1"
                     /translation="MLRIISSSPTEIQPVLDTVAENAARLCGADNAVIFRLENNVLRL
                     VASYGGIPTTSHAREGIPANRDTVIGRATCDRRTVHVLNLAVETREYPVGHIHAKQEG
                     HRTTLATPLLREGAPIGVILIRRTEVRPFYDRQIALLETFADQAVIAIENVRLFEAEK
                     QHTLALAHANRVITLGHLAASIAHEVNQPVAAIVANADAALRWLDAQPPDLREARQAL
                     RGISGDGNRMGEVIARIRGLINKVPPRRDPLDINQAISDATTLTRTELIRHRVALQVR
                     LARKPPMVRGDRVQLQQVLLNLIVNAVESMSALPEGPRELKISSARDARDSVLIEVRD
                     SGPGLRPEDFERAFQAFHTSKPDGMGLGLSICRSIVEAHGGRLWASANAPRGAIFQFT
                     LPARRAG"
BASE COUNT          375 a          640 c          638 g          351 t
ORIGIN      
        1 agttggcaaa aaggttgagc aggtaacggg ctttctcggc agcttcaggc caactcgcag
       61 ctggagccgc gaccagttgc gtttccaact cgtcctgtcg gaggcgcaag gctctttcgt
      121 tggcctccac atctgccagc agtcgccgca gatcggtcgc cttctgagcg gccatcccac
      181 gatgctgatc cagaccaatt gccttttcgg tcatttttgc gggctctggc tcgtcttgtt
      241 cgccattagt cgaaataggt acatatgatg gaattgcgtg gaaacgagcg gtcagcgcaa
      301 ttatttcacg gtgcgggatc ggtaaccgca aagggctgac aggtgctggg agctgcggtt
      361 attctccgcc cagtccccgg ctgtgataaa gcctgccccg gacaagcccg cgcagactgc
      421 gtaaacttgt ctgcgctgcc gggcgtccac gtcttacttt gctgcgcctt ttaaagacgt
      481 ggatggcatc ggaactcgga ctcgcccgag ttgcgcacta ttaagtgcgc gtcccgactc
      541 tgaaggagcg ggatgcgctc tggtccctgc gccgagggag gtgaccttgt ctggcaaagg
      601 ggcgaagcgc cgaacgcgcc gtcgcaacct tcgttcgacc gggacgaagg cgcgcctcgg
      661 tcgaactcgc cggccccgcg ccgatctcga acggcagctc gaagcgcgca gacgcgagat
      721 cgaccgcgcg cgggagcgcc tgatcgaggc ggagaagcaa caaaccgcca cctccgaggt
      781 gctgcgcatc atctcgagct cgccgaccga gattcagccc gtgctggaca cggtagccga
      841 aaatgccgcg cgcctgtgcg gcgcggacaa tgcggtgatc ttccgcctgg agaacaacgt
      901 tcttcgactg gtcgcttcct acgggggaat cccgacgacc agccatgccc gcgagggaat
      961 tcccgccaac cgagacacgg tgatcgggcg ggccacatgc gatcgccgga cggttcatgt
     1021 ccttaatctc gccgtggaga cccgtgagta ccccgtgggc cacatccacg caaaacaaga
     1081 agggcatcgc acgacactcg cgaccccgct gctgcgcgag ggcgccccta tcggggtgat
     1141 tttgatacga cgaacggagg tgcgaccgtt ctacgaccga cagatcgcgc tgctcgagac
     1201 cttcgccgac caggcggtga tcgcgatcga aaacgtgcgg ctgttcgaag ccgagaagca
     1261 gcacacgctg gcgctcgccc acgccaaccg ggtcatcacc ctggggcacc tcgcggcctc
     1321 gatcgcccac gaagtcaatc aaccggtcgc cgcgatcgtc gccaatgccg atgccgcctt
     1381 gcggtggctt gacgctcagc cgcctgactt gcgcgaggcc cggcaggcgc tgcgcggcat
     1441 cagcggggat ggtaatcgaa tgggcgaagt catcgcacgg attcgcggcc tcattaacaa
     1501 ggtgccgccg cgccgcgacc cgttggacat aaaccaggcg atctccgacg ccaccaccct
     1561 gacccggacc gagctgatca ggcatcgcgt cgcgttgcaa gtccggctgg cgcgaaagcc
     1621 gccgatggtg cggggggatc gcgttcaact gcagcaagtg ctgttgaatc tgattgtcaa
     1681 cgccgtcgaa tcgatgagcg cactgcccga agggccgcgc gagctcaaga tcagcagtgc
     1741 gagggatgcc agagacagcg tgcttattga ggtgagagat tccgggccgg gactaaggcc
     1801 ggaggacttc gagcgcgcgt tccaggcctt ccacacgagc aagcccgacg gtatgggact
     1861 ggggctctcg atctgccgtt cgatcgtcga ggcgcacggt ggacggttat gggccagtgc
     1921 caatgcgccg cgcggcgcga tctttcagtt cacactgccg gcgcgccgcg cagggtgacc
     1981 ttttcgctcc gccggccgcc ccca
//
LOCUS       DATCWM010000259         2615 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_218187, whole genome shotgun sequence.
ACCESSION   DATCWM010000259 DATCWM010000000
VERSION     DATCWM010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2615
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_218187"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..361
                     /locus_tag="VIQ50_04950"
     CDS             <1..361
                     /locus_tag="VIQ50_04950"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEY9359760.1"
                     /translation="RDLFHDQELAEAVIAGSQRPELEDAALKNRMMTAKLSWQPRNHD
                     PHLRKWLHRIKVPTLLIWGDRDRIFPKDYAFAFQGLIPGAKAVIIADCGHLPHVEKGD
                     AFAAELEAFIGAMRIAA"
     gene            358..1521
                     /locus_tag="VIQ50_04955"
     CDS             358..1521
                     /locus_tag="VIQ50_04955"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEY9359761.1"
                     /translation="MKFFNFHLMPYRHADLDAIAKNGSAWVTFSNHHYDPQKGAELYH
                     DYLDQMEFADKLGFDGVCLNEHHQTAYGMMPIPGVLAGALARSVKRAKLAILGRALPL
                     LNNPLMVAEEYAILDNLTRGRLIAGFVRGIGAEYHAMGINPAYSQERFAEAHDLIVRA
                     WTEPGPFSYVGKHYQFKYVNPWPRPYQNPHPPIWIPSQGSGSTIRWAARMRYTYCQTL
                     SPIAAVARFFQLYRDEADKAGYKASPDQLAWSNTIYVAETDETAVREARPHLEALMNY
                     FLKMPTEMLLPPGYTDPASMKRVRAAKVTGKPQSIEDVIKAGVVIVGSPNTVREKLAE
                     YQDLAGFNTSLTKTQFGTLPDDMTRANMTAIAEEVLPHFRDRSPQGARREAAE"
     gene            complement(1600..2130)
                     /locus_tag="VIQ50_04960"
     CDS             complement(1600..2130)
                     /locus_tag="VIQ50_04960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY9359762.1"
                     /translation="MSVARHQRPPELVDVPLEDIMQKYVGRFREKKPDWAAFEDAKIE
                     GYKRAQHRFIGAGGSGKHGDPSVIPAKNFTLSIMYVEPGQGNAAHTHEVEECFFVLQG
                     YLDVFVEDESGKRLTTRLGPWECISCPAGVIHGYQNDSLEPAYFQVMLGRGKPETMGY
                     ADEDLYTRRDAHLKAV"
     gene            complement(2239..>2615)
                     /locus_tag="VIQ50_04965"
     CDS             complement(2239..>2615)
                     /locus_tag="VIQ50_04965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY9359763.1"
                     /translation="DCGRIINPLTVHGQTVGSVVQGLGGAIMEHLVYDEDGQLLTGSL
                     ADYLIPTASDFPNIRAIVMGDHPSPINPLGAKGAGEGGIIAAGGVMANAVANALSAFG
                     AQPRELPLTPSRIWELAQAPRK"
BASE COUNT          476 a          843 c          829 g          467 t
ORIGIN      
        1 ccgcgacctg ttccacgatc aagagcttgc cgaggcggtg atcgcgggct cgcagcggcc
       61 ggagcttgaa gatgccgcgc tcaagaaccg gatgatgacc gctaagctgt cgtggcaacc
      121 gcgcaaccac gatccccatc tgcgcaagtg gctgcatcga atcaaagtgc cgacgctgct
      181 gatctggggg gatcgcgatc ggatctttcc gaaggactat gcattcgcgt ttcaagggct
      241 gatcccgggg gcgaaggccg tcatcatcgc ggactgcggg cacctgccgc acgtggagaa
      301 gggcgacgcc tttgccgccg aactcgaagc cttcatcggc gccatgagga tcgcagcatg
      361 aagttcttca atttccatct catgccttac cggcacgccg acctcgatgc gatcgcaaag
      421 aacggctcgg cctgggtgac gttctcgaac caccattacg atccgcaaaa gggcgccgag
      481 ctctatcacg actatctcga tcagatggag tttgccgaca agctcggctt cgacggcgtc
      541 tgcctcaatg agcatcacca gaccgcttac ggcatgatgc ctatacccgg cgttctcgcc
      601 ggggcactgg cgcgcagcgt caaacgcgcc aagctcgcca ttctcggccg cgcgctgccg
      661 ctcctcaaca atccgctgat ggtggcggaa gaatacgcta tcctcgacaa tctcacgcgc
      721 gggcggctga tcgcgggttt cgtgcgcggc atcggcgccg aatatcacgc catgggcatc
      781 aatccggcct attcgcagga gcgtttcgcc gaagcccacg atctcatcgt gcgggcatgg
      841 accgagccgg ggccgttctc ctatgtcggc aagcactatc agttcaaata cgtcaatccc
      901 tggccgcgcc cgtaccagaa cccgcatccg ccgatctgga taccctcgca aggctccggg
      961 tcgaccatcc gctgggccgc gcgcatgcgc tacacctatt gtcagacgct aagcccgatc
     1021 gcggcggtgg cgcgcttctt ccagctctat cgcgacgagg ccgacaaggc gggctacaag
     1081 gcctcgcccg accaactcgc ctggtcgaac acgatctacg tggccgagac cgacgaaacg
     1141 gcggtgcggg aggcgcggcc gcacctggaa gcgctcatga actatttcct gaaaatgccg
     1201 accgagatgc tgctgccgcc gggctatacc gatcccgcct ccatgaagcg ggtgcgcgcg
     1261 gccaaggtca cgggcaagcc gcagtcgatc gaggatgtca tcaaggcggg cgtcgtgatc
     1321 gtgggaagcc ccaacaccgt gcgcgaaaag ctcgccgagt atcaggatct ggcgggcttc
     1381 aacacctcgc tgaccaagac ccagttcggc acgctgcccg acgacatgac gcgcgcgaac
     1441 atgacggcga tcgccgagga ggttctgccg catttccgcg atcgttcccc gcagggcgcg
     1501 cgacgggagg cggcggagta acagcgcatc atcggccgct gccgcgcgcg cactgtcatt
     1561 tcgggaaatg acggacagcg tgttgcgcgt tggcgcgcct cagaccgcct tgagatgggc
     1621 atcgcggcgc gtgtagaggt cctcgtcggc atagcccatg gtctcgggct tgccgcgtcc
     1681 gagcatgacc tgaaagtagg ccggctccag gctgtcgttc tgatagccgt ggatgacgcc
     1741 ggcggggcat gagatgcatt cccacggccc gaggcgggtg gtgaggcgct tgccgctctc
     1801 gtcctcgacg aagacgtcga gataaccctg cagcacgaag aagcactctt cgacctcgtg
     1861 ggtgtgggcg gcgttgccct gtcccggctc cacatacatg atcgacaggg tgaagttctt
     1921 cgccgggatg acgctcggat cgccgtgctt gccggacccg cccgccccga tgaagcggtg
     1981 ttgcgcgcgc ttgtagcctt cgatcttggc gtcctcgaac gccgcccagt ccggcttctt
     2041 ctcgcggaag cgcccgacat atttctgcat gatgtcctcg aggggaacat cgaccagttc
     2101 cggcggacgc tgatgccgtg caacgctcat gggtcgctcc tattgaaacg gcggaaatac
     2161 tacgtcgaat ttatgctttc atggcgcgac gcgtcaatga agcgggccgg ccgccacgga
     2221 ctggatcaga acgcggcgtc acttgcgtgg cgcctgcgcg agctcccaga ttcggcttgg
     2281 cgtgagcgga agctcgcgcg gttgcgcgcc gaacgcgctc agcgcgttcg ccacggcgtt
     2341 ggccattacg ccgccggcgg cgatgatgcc gccctcgccg gcgccctttg cgcccaacgg
     2401 attgatcggc gaggggtgat ctcccatgac aatggcgcgg atgttgggga agtcgctggc
     2461 ggtggggatg agataatcgg caagcgagcc ggtcagcagc tggccgtcct catcgtagac
     2521 gagatgttcc atgatggcgc cgccgagccc ttgcaccacc gagccgacgg tctgcccgtg
     2581 taccgtcaag ggattgatga tgcggccgca atccg
//
LOCUS       DATCWM010000260         7256 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_153407, whole genome shotgun sequence.
ACCESSION   DATCWM010000260 DATCWM010000000
VERSION     DATCWM010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7256)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7256)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7256
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153407"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..691)
                     /locus_tag="VIQ50_04970"
     CDS             complement(<1..691)
                     /locus_tag="VIQ50_04970"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009756597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HEY9359764.1"
                     /translation="MTASESKARLKGLFNITVTPFMPDGGIDFHGLAESIERLLAMGF
                     DGLLIGGTYGEFATMSAEERAALFRHVVEVVRGRAPTLLCSAHSDPRVALELTQLATG
                     LGGVPMVTPPFVSEVDDEHILGFFKSLAAASSSGLVIYNAPGIGITLSAGLIERLSDM
                     DHIIGLKQGDLNPTVIDQLSNRLGGRIRLFCASDLAFLGPMMAGFDGLSSTNSCALPE
                     VIRASYRAIEAG"
     gene            983..1999
                     /locus_tag="VIQ50_04975"
     CDS             983..1999
                     /locus_tag="VIQ50_04975"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359765.1"
                     /translation="MALKTLRWVFVLLAALCIADGPASAQQLPKMVHAGLRTLYLAPV
                     FIGIDRGIFKANGVEVTYQELESGALSPAALLSGQAHVTSDEILGIAPLAKQGKEFMM
                     VYNLMDRMTMNLVVRNDALAKAGYDPKAPVTERAKALKGLTIGITRPGAPTDTYSRYF
                     MIMGGLDPTRDATLMQIGGGGALNAAFRSGRIDAFMLSPPFPQEAERDGEGKIIINNT
                     AGEVPELTGMSYIVLFTTKEFAEKNKPALRSYVHSIQDSLKWIGQNREEALKLLGANW
                     FKNSKPETLALSFDALLPSLSTTGEFTPASFKKFLDVYKTIGEPVDIDLTEGKLWTNE
                     FVKR"
     gene            2086..2955
                     /locus_tag="VIQ50_04980"
     CDS             2086..2955
                     /locus_tag="VIQ50_04980"
                     /inference="COORDINATES: protein motif:HMM:NF028234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipicolinate synthase subunit DpsA"
                     /protein_id="HEY9359766.1"
                     /translation="MVGGDVRMLEHMRLARLAGAKVQHYGSVPGAEEAAGRPQARSLA
                     DAVNAARIISCPIPGLGADDELYAKYTTEKLRLTADVLKGAAPGAMLFTCYSTPRMDE
                     WAKAAAVKIIPYGTDDALSILHAVPTAEGAIRIAIENTEETLLGMDVLCIGFGRVGVS
                     VAQAFEGMRSRVSVGARNHVQLARACAMNMTPIELRNLKSQIRNFGLIVSSAAGRVLD
                     KDLLALTRPDVVIIDLCSPPGSVDFEAAKALQRKTIWGRAQAGRAPRRAGRDEWQVLM
                     RILREQTPELQRA"
     gene            2952..3806
                     /locus_tag="VIQ50_04985"
     CDS             2952..3806
                     /locus_tag="VIQ50_04985"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010683309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9359767.1"
                     /translation="MTIPASLEPDENVARKTLQTSSVLEARNVYKVFVARGKARTALR
                     NVDLTIHRGEFVCLVGPSGCGKSTVLNMFAGLVTPTDGTILHDGRVIAGVNTRVGYVT
                     QDDNLLPWRTALANVELALECKGVRRAERRERAFDYLARVGLKGSAELYPHELSGGMR
                     KRVSIVRTLVDDSVDVILMDEPFGPLDAQTRLVLQDELLRLWQGTDRTIVFVTHDIVE
                     AITLSDRIATFTGVPGSIKQVRNVTLPRPRDVFHIHETPGFAMIYDAIWNDLREELLE
                     ERGSDAGA"
     gene            3793..4665
                     /locus_tag="VIQ50_04990"
     CDS             3793..4665
                     /locus_tag="VIQ50_04990"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9359768.1"
                     /translation="MPARESHAQAHEARPHERSLLLDEERRSAGHRRSRALRVFGLRI
                     GVLAGFLILWSAASGRLIDSLFVSDPISVARSFMQISLDGTLWWHLRLTLLEMTLGYI
                     LGVVVGVGLAIVIALIWRGEQIVRPLMLGVFAIPKVALAPLVIVWFGIYLLPKVILAA
                     SLVLFIVYFSTLAGFAAVNRDLVASVRVMGASRGALFLKLILPSAAPYIFSAMRITLP
                     GALIGAIIGEFVSSNRGVGFLIAYASSRYDTAQVFAAILSLLIFSLILNAMVSRLERY
                     VARWRSEEPQWGPA"
     gene            4650..6407
                     /locus_tag="VIQ50_04995"
     CDS             4650..6407
                     /locus_tag="VIQ50_04995"
                     /inference="COORDINATES: protein motif:HMM:NF013086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEY9359769.1"
                     /translation="MGPGVTASAGHFFRTVETDVLVVGGGLAALRAAISARQAGARVL
                     VAVKRLLGRSGSSALTTGGYAAALPALNEHDDRHLHYVDTVVGGGCINERALVHALVN
                     DAPARLAELWEFGAPFRKRDGRYHLSPSGDHSQARVVVPEHMRGGDMTLPMRDIASAL
                     GIEVLESCVITDLLQNEDRVVGAVGIARNRVEGFVIEAGAIVLAAGGAGRMFTITSNP
                     ADVCGAGFALALRAGARLRDMEFVQFYPWRLIHPFKSTRVPIQPSTFSIGGRLYNSKG
                     ERFMEAYDPVRKDATTRDLSARGIFEQIRAGHSIEGGVILDVSQIPDDQFRYENSKVV
                     QLLDPKKIDYRAIKLIVAPEAHFFMGGVLIDDGGRCDLHGLYAAGENAGGTHGGNRLN
                     SNAVPETQVFGHRAGLAAARQARAARAGKPDPGPIAKAAERLQALRSDATSPAPEFAA
                     LHEQLKQAMTLGIGIVRTAKGLERAIADAAAIAERLSGLPVQTLGDLTAAVEIEDLCS
                     IGTACALSALARNESRAAHYRDDFPKTDAAWMRTITYDRNGVGERPLVVDPNEQGLIA
                     RHEAARKASAKPAEPEHVE"
     gene            6492..>7256
                     /locus_tag="VIQ50_05000"
     CDS             6492..>7256
                     /locus_tag="VIQ50_05000"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9359770.1"
                     /translation="MHDQAVRETRRQRLIEHAAVAVGRAVLIGAILGLWAYAAGRWVD
                     SQAISDPAAVLHALYDLVTTGRLWPDLWQTVFEVLAGYAFGALAAVLMASLFAIFPTM
                     EEALRPFLIAVYSIPKVALAPLMIMWFGLGNAPKIILAGGFVFFIVFMNVVSGIQSVN
                     RNHINIVRVMGGTRITVLRKIVFPTAIPFLFLGLRLAIPEAMIGAVIGEFIAASRGLG
                     FLIYSASNELNIAVSMAALVVLVFVVAIGDVLIGLLE"
BASE COUNT         1355 a         2182 c         2260 g         1459 t
ORIGIN      
        1 cgcccgcctc gattgcccga tagcttgccc ggatgacctc gggcagcgcg cagctattcg
       61 tcgaggatag cccgtcgaac ccggccatca tcggcccgag aaacgcaaga tcggatgcgc
      121 agaacaatct gatcctcccg ccaaggcggt tcgacaattg gtcgatcacc gtggggttca
      181 ggtctccctg tttgagccca atgatatgat ccatgtcgct cagccgctcg atcaagccag
      241 cggacaatgt gataccgatc cccggcgcat tgtagatcac caggccgctg gacgaggcgg
      301 cggcaagcga tttgaaaaac ccgagaatat gctcgtcgtc gacctccgat acgaacggcg
      361 gtgtcaccat cggaacgccc ccgaggccgg tcgcaagttg cgtcagctca agcgcgaccc
      421 tgggatcgga atgggcgctg caaagcaatg tcggcgcgcg accgcggaca acctcgacca
      481 cgtgacggaa cagcgcggcc cgttcttccg ccgacatggt tgcaaactcg ccgtaggttc
      541 ccccgatcag caatccgtcg aaacccatcg ccaagagccg ttcgatgctc tcggccagcc
      601 catgaaaatc gatgcctcca tcgggcatga atggcgtgac ggtaatattg aaaaggcctt
      661 tgagccgggc cttggattcg ctcgccgtca tcgttctcag cgcctgcagc cacgagacgc
      721 tgtccggcaa gcgcttccgc ctaatcctaa caacaccgtg gcgaaatgcc tcaacaccga
      781 caccatcttc agatttccaa gcctaaatct tactttccgc gcgcggttga ccaaccgttc
      841 aacaatttcc gtccagcttt tttaccttgt actcgatacg cgcctcaata caatcttttg
      901 aatcgaacat gaatacggca gtagatacag agtcgggcac gacgcggcac tgcctcgtgc
      961 gaacgcagaa aatgatagag acatggcctt gaaaacgttg cgatgggttt tcgtcttgct
     1021 ggcggctttg tgcattgcgg acggccccgc ctcggcgcag caactgccga agatggttca
     1081 tgccggcctg cgcacgttgt acctcgcgcc ggtcttcatc gggatcgatc gcgggatttt
     1141 caaagccaac ggcgtcgagg tcacctatca ggagttggaa agcggcgccc tctcgcccgc
     1201 cgcccttcta tccgggcagg cgcatgtcac gagcgacgag atcctcggca tcgcgccgct
     1261 cgccaagcag ggcaaagaat tcatgatggt ctataatctc atggaccgca tgaccatgaa
     1321 tctcgtcgtg cgcaatgatg cgctggcgaa ggcgggctac gatcccaaag cgcccgtcac
     1381 agagcgagcc aaggcgctca aaggtctgac catcggcatc acgcggccgg gggcgccgac
     1441 cgacacctat tcgcgctact tcatgatcat ggggggccta gatccgacgc gtgacgcgac
     1501 gctgatgcaa attggcggcg gcggcgcgct aaatgccgcg ttccggtccg gccgcatcga
     1561 tgccttcatg ctctcgccgc cgtttcccca agaggccgag agggacggcg agggcaagat
     1621 catcatcaac aataccgccg gtgaggtgcc ggaattgacc ggcatgagct atatcgtttt
     1681 gttcacgacg aaggaattcg ccgaaaagaa caagccggcg ctgaggtcct atgtccattc
     1741 gatccaggac tcgctcaaat ggatcgggca gaatcgcgag gaagcgctca agctgctcgg
     1801 cgcgaactgg ttcaagaaca gcaagcccga gacgctagcc ttgtcgttcg acgccttgtt
     1861 gccgtctctc agcacgacag gagaattcac cccggcatcg ttcaagaaat ttctggacgt
     1921 ttacaagacc atcggtgaac ccgtggatat cgacctcacc gaaggaaaat tgtggaccaa
     1981 tgaattcgtt aaacgatgac tgaaatcgcc tgcggcataa tctttgcaag tcaaaccggg
     2041 taagcgaacg tggatgacgg cgaattgaaa ggctggacgg tcgccgtggt cggcggcgat
     2101 gtacggatgc tcgagcatat gcggctggcc cggctcgctg gtgcgaaggt tcagcattac
     2161 ggatccgttc caggcgcgga agaggccgcc ggtcggccgc aggcgcgaag tcttgccgat
     2221 gcggtaaatg ccgcgcgcat catttcatgt ccgattccgg ggctcggcgc cgatgacgag
     2281 ctttacgcca agtacacaac cgagaaactg cgcctgacgg ccgacgtact caaaggcgct
     2341 gcgcccggag ctatgctgtt tacctgctat tccaccccgc gcatggatga atgggccaaa
     2401 gccgccgcgg tgaaaatcat tccgtacggc acggacgacg cactctctat ccttcacgcg
     2461 gttccgaccg ctgaaggcgc tatccggatc gcgatcgaaa acaccgagga gactcttctc
     2521 gggatggatg tgctgtgcat cggtttcggc cgcgtcggcg tcagcgtcgc ccaggcgttc
     2581 gagggaatgc gctcgcgcgt gtcggtcggc gcgcgcaatc acgtgcaatt ggcccgtgcc
     2641 tgcgccatga atatgacccc gatcgagttg cgcaacttga aatcgcaaat aaggaatttc
     2701 ggcttgatcg tgagctcggc ggccggccgt gttctggaca aagacctgct cgcgctgacc
     2761 cggcccgatg tggtgatcat cgatctctgc tcgccgccgg gcagcgtcga cttcgaagcc
     2821 gccaaggcgt tgcagcgcaa gacgatctgg ggccgtgccc aggcaggacg cgccccccgc
     2881 cgagccggcc gtgatgaatg gcaggtcctg atgcgtatcc tgcgcgagca aacgcctgaa
     2941 ctgcaacgcg cgtgacgatc cccgcctccc tcgaaccgga cgagaacgtc gcgcgcaaga
     3001 cgctgcaaac atccagcgtg ctggaagccc gtaacgtcta caaggtgttc gtggcgcgtg
     3061 gtaaggcgag gacagccctc cgcaacgtcg acttaacgat ccatcgcggc gaatttgtct
     3121 gcctggtcgg gccctcaggc tgcggaaagt ccacggtcct caacatgttc gccgggctgg
     3181 tgacacctac cgacggcact attctgcatg acggtcgcgt gatcgccggc gtcaacaccc
     3241 gggtcgggta tgtgacgcag gacgacaacc tcctgccctg gcgcacggcc cttgcaaatg
     3301 tcgaactcgc gctcgaatgc aagggcgtac gccgtgccga gcggcgcgaa cgcgcattcg
     3361 actatctcgc tcgcgtcggc ttgaaaggaa gcgcggaact ttatccgcac gagctgtcag
     3421 gtgggatgcg caagcgagtc tcgatcgtgc ggacgctcgt cgatgacagc gttgacgtca
     3481 ttctcatgga cgagccgttc ggaccgctcg atgcgcagac tcggctggtt ttgcaggacg
     3541 agttgctgcg gctgtggcag ggaaccgacc ggaccatcgt attcgtcacc cacgacatcg
     3601 tcgaagcgat caccttgagc gatcgcatcg cgaccttcac cggggtgccc ggttcgatca
     3661 agcaagttcg caatgtcacg ctgccgcggc cgcgcgacgt cttccatatc catgagacgc
     3721 ccggatttgc aatgatctat gacgcaatct ggaacgatct gcgcgaggaa ctcctcgaag
     3781 agcgaggcag cgatgccggc gcgtgaatcg catgcgcagg cgcacgaggc ccggccgcat
     3841 gaacgatcgc tgctgctcga cgaagagcgc cgttccgcgg gtcatcgacg ctcccgggca
     3901 ttgcgcgtgt tcgggcttcg catcggggtt ctggccggat ttctcatact ttggtcggcg
     3961 gcgtccggaa gattgatcga cagcttgttc gtcagtgatc ccatctcggt cgcgcgctcg
     4021 tttatgcaga tttcgcttga tggcacgctg tggtggcatc tcaggctcac gctcctcgaa
     4081 atgacgctcg gttacatcct cggtgtggtc gtcggcgtcg ggcttgcgat cgtcatcgcg
     4141 ctgatttggc ggggtgaaca gatcgttcgg ccgctgatgc tcggcgtgtt cgcgatcccg
     4201 aaagtggcgc tcgcgccgct cgtgatcgtc tggttcggca tttatctact gccgaaagtc
     4261 attctggcgg catctctggt cttgttcatc gtttatttca gcacgctggc cggctttgcc
     4321 gcggtcaatc gcgacctcgt tgccagtgtc cgggtgatgg gcgcttcgcg cggagcgctg
     4381 ttcctcaagc tgatcctgcc gagcgctgcg ccctacattt tttcagccat gcgcatcacc
     4441 ctgcccggcg ccctgatcgg ggcgatcatc ggggaattcg tgagcagcaa tcgcggcgtc
     4501 gggtttctca ttgcatatgc cagctcgcgt tacgatacgg cacaggtgtt tgcggcaatt
     4561 ctgagcctgc tgatcttcag tctcatcctc aacgcgatgg tgtcgcgatt ggagagatac
     4621 gtggcccggt ggcgttccga ggagccgcaa tggggcccgg cgtgacggcc tcggctggcc
     4681 atttctttcg cacggtcgag accgacgtgc ttgttgtcgg tggcgggctc gcggctctgc
     4741 gcgccgcgat ttccgcgcgc caggcgggcg cgcgtgtgct ggtcgccgtc aagcgcctgt
     4801 tggggcgcag cgggtcctcg gcgctgacca ccggcgggta tgcggcggcg ttgccggcct
     4861 tgaacgagca cgacgaccgg catttgcatt acgtcgatac ggtcgtcggc ggcggctgca
     4921 tcaacgaacg tgcgttggtg cacgcgctgg tgaacgacgc tccggctcgc cttgccgaat
     4981 tgtgggagtt cggcgctccg tttcgcaagc gcgacggtcg ctatcatctt tctccgagcg
     5041 gggatcattc gcaagcgcgc gtcgttgttc ctgaacacat gcgcggaggc gacatgacgc
     5101 tacccatgcg tgacattgcg tcggcgcttg gcatcgaggt tcttgaaagt tgcgtgatca
     5161 cagacctcct gcagaacgaa gatcgcgttg tgggcgcggt cggcatcgcg cggaacaggg
     5221 tcgaaggctt tgtgatcgaa gctggcgcaa tcgtgttggc ggcgggcggc gccggacgca
     5281 tgttcaccat cactagcaat ccggccgatg tttgcggcgc cgggttcgcc ttggcgctgc
     5341 gtgccggcgc gcgcctgcgt gacatggaat tcgtccaatt ctatccctgg cgcctgatcc
     5401 atcccttcaa atcgacacgg gttccgatcc agccgtccac gttctcgatt ggggggcggc
     5461 tctacaacag caagggcgag cgcttcatgg aggcctatga tcccgtgcgc aaggacgcca
     5521 cgacgcgcga tctctccgcg cgcgggattt tcgagcagat cagggctggc cattcgatcg
     5581 aaggcggcgt cattctcgat gtgtcccaga ttcccgacga tcagttccga tatgagaatt
     5641 cgaaggtggt gcagttgctg gatcccaaga aaatcgatta tcgagcgatc aagctcatcg
     5701 ttgcgccgga agcgcatttc ttcatgggcg gcgttctgat cgacgatggc ggccgttgcg
     5761 acctgcacgg cctttatgcg gccggggaaa atgcaggcgg tacgcatggt ggaaaccggc
     5821 tcaacagcaa tgccgtcccg gagacccagg tctttggtca tcgcgccgga ctggcggccg
     5881 cgcgccaggc gcgggcggcg cgcgctggca agcccgatcc cggtccgatc gcgaaagcgg
     5941 cagagcggct gcaggcccta cgatcggatg cgacgagtcc ggcgccggaa ttcgctgcgc
     6001 tgcacgagca attgaagcag gcgatgacgc ttgggatcgg catcgtgcgt acggcaaaag
     6061 gcctcgagcg ggccatcgca gatgccgccg ctatcgcgga acggctgtcc gggttgccgg
     6121 ttcaaacgct cggggatctc accgccgcgg tcgagatcga ggacttgtgt tcgatcggta
     6181 cggcctgcgc gttgagcgcc ctggcgcgta acgaaagccg tgccgcgcat taccgcgatg
     6241 atttcccgaa aaccgatgcg gcctggatgc ggaccatcac ctatgaccgc aatggggtcg
     6301 gtgagcgccc cctcgttgtc gatccgaacg aacagggcct gatcgccagg catgaggccg
     6361 cacgcaaagc gtctgctaag ccggccgaac ccgaacatgt cgagtagcgt gaaggcgcca
     6421 gccgagacat gacccaggcg gctcctcagg cacttactgc tgcggctggc aattcggcgg
     6481 tcgagcgcgt cttgcatgat caagcggtgc gcgagacgcg ccggcagcga ttgatcgagc
     6541 acgcagccgt ggcagtcgga cgtgccgtgc tgatcggggc gatcctgggc ttatgggcct
     6601 atgctgcggg acgctgggtc gacagtcagg cgataagcga tccggccgcc gtcttgcacg
     6661 cgttgtatga tctcgtcacg acgggacgtt tgtggcctga tctctggcag acggtcttcg
     6721 aggtgttggc cggatatgcc ttcggggcgc tcgctgccgt tctcatggca tcgctgtttg
     6781 cgatctttcc gacgatggaa gaggcgctgc gtccgtttct tatcgcggtt tattcgattc
     6841 cgaaagttgc gctcgcgccg ctcatgatca tgtggttcgg attgggaaac gcaccaaaga
     6901 tcatcctggc cggcggattc gtgttcttca tcgtgttcat gaacgtcgtc agcggtatcc
     6961 agagcgtaaa ccgcaaccac atcaatatcg tccgggtcat gggaggaacg cgcatcaccg
     7021 ttctacgaaa gatcgtgttt ccgactgcga taccgtttct ctttctgggg ttgaggctcg
     7081 cgatcccgga agccatgatt ggggcagtga tcggagagtt catcgccgcg agcaggggac
     7141 ttggctttct catctattca gcatcgaatg agctcaatat cgccgtatcc atggcggcac
     7201 tggtcgtgct ggtgttcgtc gtggcgatcg gcgatgttct gatcggactg ctcgaa
//
LOCUS       DATCWM010000261         3625 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_320741, whole genome shotgun sequence.
ACCESSION   DATCWM010000261 DATCWM010000000
VERSION     DATCWM010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3625
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_320741"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..119
                     /locus_tag="VIQ50_05005"
     CDS             <1..119
                     /locus_tag="VIQ50_05005"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY9359771.1"
                     /translation="GRRGEPADIAAAVRFLCGPGAGFVTGQNIQVNGGTFLG"
     gene            217..348
                     /locus_tag="VIQ50_05010"
     CDS             217..348
                     /locus_tag="VIQ50_05010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEY9359772.1"
                     /translation="MKGIVGSFHKVSAKYMPLYVAEFQFRYNNRENPDIFGAAIAGC"
     gene            348..1166
                     /locus_tag="VIQ50_05015"
     CDS             348..1166
                     /locus_tag="VIQ50_05015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359773.1"
                     /translation="MFSDWAKFAGFSAVLGIALAIGILALQETPKPAQKYQGSQPSET
                     HPNPATNWTPWLVILKTLTSGGLQEITEYCNSYSEHEKKQWPQSYYCELKVTDVWLAI
                     FTGLLFLVTGGLVIATVKLWNATVENERPWVGPITVVGPITVDRSQIIVEQRSRGTST
                     IKNTGRSPALKMRITHRNFILNQGQVPTLSAVWETPKALFPGAADSYHPAVESGPLSQ
                     GDINAILAGTRALWMIARIEYFDRDGNMHHTNISTRWGGMNRPDMVPEGDNDAN"
     gene            1361..1477
                     /locus_tag="VIQ50_05020"
     CDS             1361..1477
                     /locus_tag="VIQ50_05020"
                     /inference="COORDINATES: protein motif:HMM:NF025088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359774.1"
                     /translation="MHVRAGSKEAKFWLHDLATAVNIGFPRMNSAISFATCG"
     gene            1505..1750
                     /locus_tag="VIQ50_05025"
     CDS             1505..1750
                     /locus_tag="VIQ50_05025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2442 domain-containing protein"
                     /protein_id="HEY9359775.1"
                     /translation="MTTLEIDVGDLHARAIEFTATELVVTLADGRKIATPLDWYPRLQ
                     RATAKERANFEIMPMGIHWPDLDEDLGIAGMLRGRRA"
     gene            1854..3281
                     /locus_tag="VIQ50_05030"
     CDS             1854..3281
                     /locus_tag="VIQ50_05030"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEY9359776.1"
                     /translation="MYTDLALYIDGKWVNGVGRKGEDVLNPATEKPLAHLPHAGKADL
                     DEALEAAKRGFALWRATSAYDRAKIMRKAADLMRERHDAISKVLVQEQGKVYAEARAE
                     VITSADIIDWYAEEGRRSYGRIVPGRVKGTRQLVVSEPVGVVAAFTPWNFPVLTPARK
                     IGGALAAGCSLILKASEETPGACIETVRCFVDAGLPAGVLNLVFGVPAEVSEHLLAKD
                     AVRKISFTGSIPVGKHLAALAAKGMKRTTMELGGHSPVVVFADADAEKAADTIAAFKY
                     RNAGQVCISPTRFYVQEDAYKKFLARFSDYAKGVKLGDGLEKGVTMGPMANGRRIDAM
                     ESFVADARSRGGNVVTGGKRHGNQGFFYEPTIVTDVPDDAKVMTEEPFGPIAPIVTFK
                     TFDEVVERTNSLPFGLAAYAFTSSNTTAAAIGEAIESGMVGVNSVAVSTPETPFGGVK
                     ESGHGSEGGIEGLGAYLNTKFISQG"
     gene            complement(3375..>3625)
                     /locus_tag="VIQ50_05035"
     CDS             complement(3375..>3625)
                     /locus_tag="VIQ50_05035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011578988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359777.1"
                     /translation="SFMDYAMPRADDLPLFKDAIHAVPAKTNPLGVKGAGEAGTTAAI
                     AAVMNAVADAIPGGAGVHLDMPATAEKIWQACRQAQQK"
BASE COUNT          718 a         1085 c         1124 g          698 t
ORIGIN      
        1 tcggccggcg cggagaaccc gccgacatcg ccgcagcggt gcgtttcctc tgcggtcccg
       61 gggcgggctt cgtcaccgga cagaacatcc aggtcaacgg tggaacgttt ttggggtagc
      121 cgttcctcgt ggttgcctaa agaattcttt cgcggggcga ggccgagatg ccgacggttc
      181 tgcggtgggg tccttatcgc gctttcttct attccaatga aggggatcgt cgggagcttc
      241 cacaaggtca gcgctaaata catgccgctt tatgttgcgg agtttcaatt ccgctacaat
      301 aatcgcgaga acccggacat cttcggagca gcaattgcgg gttgctgatg ttttcggatt
      361 gggccaaatt tgctggcttt tccgccgttc ttggcatcgc tctcgccatt gggattttgg
      421 cattacagga aaccccaaaa cccgctcaga aataccaggg gtcccaacca agcgagaccc
      481 atcccaatcc ggcgacaaac tggacgccat ggttggtgat attgaaaacg ctgacatccg
      541 ggggactgca agagataacc gaatattgta attcctactc cgagcatgag aaaaagcagt
      601 ggcctcaaag ttattattgt gagctcaaag taacggacgt ttggctcgct attttcactg
      661 ggcttctgtt tcttgtgacc ggagggctgg taattgccac tgtgaaactc tggaacgcca
      721 ctgttgaaaa tgagagaccg tgggttggac caattactgt tgttggaccc attactgttg
      781 atcggagcca aataattgtt gaacaacgca gtcgaggcac cagtactata aaaaacactg
      841 gacgtagtcc ggctcttaag atgcggatca cacacaggaa cttcattctc aatcaaggac
      901 aggttcctac cctttctgct gtgtgggaaa cccccaaagc gctctttccc ggcgctgcag
      961 actcctatca tccggcagtc gagagcggcc ctctgtcgca gggtgacatc aatgccattc
     1021 tggccggaac cagagcgctc tggatgatcg cccgaatcga atactttgat cgggacggca
     1081 atatgcacca caccaatatc agcactagat ggggcggcat gaaccgcccc gatatggttc
     1141 cagagggtga caatgatgcc aactagcgcc catttcagaa gagcttttgg ataagagcca
     1201 cgattattgg actcgccccc gttagaaggg ctacccacaa cggcatccaa tctcttcggc
     1261 ggcggcgctt ctgtctcatg gtgcaacgat gctcccgtga gcatcgttgt tcgacgcgaa
     1321 gttggggaac atcgccaatg aaggagacga gcccgcccac gtgcatgttc gtgccgggag
     1381 caaagaagct aaattctggc ttcatgatct cgccacggcc gtgaatatag gtttcccgcg
     1441 catgaactcg gcgatatcct tcgccacttg cggttagatc gcgaacagct attggcggcc
     1501 tggaatgact actttggaaa ttgacgtcgg cgacctccac gctcgcgcga ttgaattcac
     1561 cgcaacggag ctggtcgtaa cccttgctga tgggcgcaaa attgcaacgc cgctcgattg
     1621 gtatccgcgg ctccagcgtg ctacggccaa agagcgcgcg aacttcgaga tcatgccgat
     1681 gggaatccac tggcccgacc tcgacgagga tctcggcatt gcagggatgc tgagggggcg
     1741 gcgagcataa gcgctggccc gctgcgacgg gtcgacgggg tgaatccggc cgcgaaaggt
     1801 gctaatccct ttgccgccga tatcgcggcg aacgtcagga caatgaggac gccatgtaca
     1861 ccgatctcgc gctctatatc gacggaaagt gggtcaacgg cgtcggccgc aagggcgagg
     1921 acgtgctcaa tccggcgacc gagaagccgc tggcgcatct gccccatgcc ggcaaggccg
     1981 atctcgacga ggcgctggag gcggcgaaac gcggcttcgc cctgtggcgg gcaacctcgg
     2041 cctatgaccg ggcgaagatc atgcgcaagg ccgccgacct catgcgcgag cgccacgatg
     2101 cgatctcgaa agtgctcgtg caggagcaag ggaaggtcta cgccgaggcg cgcgccgagg
     2161 tcatcacttc tgccgacatc atcgactggt acgcggaaga aggccgccgc agctacggcc
     2221 gcatcgtgcc gggccgcgtc aagggcacgc ggcagctggt tgtgtcggag ccggtcggcg
     2281 tcgttgccgc cttcacgccg tggaacttcc ccgtgctcac gcccgcgcgc aagatcggag
     2341 gggcgctggc ggcgggctgc tcgctcattc tcaaggcctc ggaggagacg ccgggcgcct
     2401 gcatcgaaac ggtgcgctgc tttgtcgacg cggggctgcc tgcgggcgtg ctcaatttgg
     2461 tgttcggcgt gccggccgaa gtttccgagc atctgttggc gaaggacgcg gtgcgaaaga
     2521 tttccttcac cggctcgatt ccggtcggca agcatctcgc cgcgcttgcc gccaaaggca
     2581 tgaagcgcac cactatggag ctcggcggcc actcgcccgt ggtggtgttc gccgatgccg
     2641 atgcggagaa ggccgccgat accatcgccg cgttcaaata ccgcaacgcc ggccaggtct
     2701 gcatctcgcc gacgcgcttc tacgtgcagg aagatgccta caagaaattc ctcgcccgct
     2761 tttccgacta tgccaaaggc gtcaagctcg gcgacgggct cgaaaagggt gtcaccatgg
     2821 ggcccatggc gaacgggcgc cgcatcgacg ccatggaaag cttcgtcgcg gacgcgcgca
     2881 gccgcggcgg caacgtcgtc accggtggca agcgccacgg caaccagggc ttcttctatg
     2941 agcccacgat cgtcaccgac gtgccggacg atgccaaggt tatgaccgag gagccgttcg
     3001 ggccgatcgc gccgatcgtc acgttcaaga cgtttgacga ggtggtggag cgcacgaact
     3061 cgctgccgtt cggacttgcg gcctatgcct tcaccagctc gaatacgacc gcggcggcga
     3121 tcggcgaggc gatcgagtcc ggcatggtgg gcgtcaattc ggtggccgtc tccacgccgg
     3181 agacgccgtt cggcggcgtc aaggagtccg gccacggcag cgaaggcggc atcgaagggc
     3241 tcggcgccta cctcaacacc aagttcatct cgcagggtta gctgcgctca ccctcacgct
     3301 gaggagcatc gcagcgcgcg agtagagatc cgccgctcgc gcgctcctca ggatgagggc
     3361 ggcgccgagc ttcgttattt ctgctgcgcc tgccggcacg cctgccagat cttctccgcc
     3421 gtcgccggca tgtcgaggtg aacgccggcg ccgccgggaa tggcgtcggc gacggcgttc
     3481 atcaccgcgg cgatcgcggc ggtggtgccg gcttcgcccg cgcccttcac gccgagcggg
     3541 ttggtcttcg ccggaaccgc gtggattgcg tccttaaaca gcggcaggtc gtcggcgcgc
     3601 ggcatcgcat aatccatgaa cgagc
//
LOCUS       DATCWM010000262         6585 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_439514, whole genome shotgun sequence.
ACCESSION   DATCWM010000262 DATCWM010000000
VERSION     DATCWM010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6585)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6585)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6585
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_439514"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1600)
                     /locus_tag="VIQ50_05040"
     CDS             complement(<1..1600)
                     /locus_tag="VIQ50_05040"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014332823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HEY9359778.1"
                     /translation="MLDQPAASHHIRLQDHPRLDFQDHLADLEAKGLLVRVDRPINKD
                     TELHPLVRWQFLGGVPEDKRRAFLFTHVTDSKGRRYDIPVAVGALAASPDIYAIGMGQ
                     AVGDIGEAWMRAIANPIAPVVVGAPRCQEVVLTGDDLKAPGGLARLPVPVSTPGFDSA
                     PYLTATLCVTRDPDSGVQNMGTYRAALKAPDRLVVRMVAREASGAGGYLHWLKYRKRR
                     DVMPIAIVIGCAPVVMFTGPQKLAIDMDELGVAGALAGCPIETAKAATVDLYVPASAE
                     IVIEGLIDPDKLEPEAPFGESNGYVALEAYNMPMRVTAITHKRAPVFASIISQVTPSE
                     SSVVKKVAYEPLFLSHLRDRLGIKGVRRVMMHERLTNLRPVIFVQLAEGVPRSEVWRA
                     LHGTATLQSNCGKIVIAVSEDIDPASMDAVLWSLAYRTNPIEDVHLVPHRGGVQGAQY
                     GPKTTDSGMLVDATRKYPMAPLALPTREYMEHARALWEELDLYPLSVQSPWHGYGLGD
                     WTDRWETFARRAATGDWELTGRETL"
     gene            1744..2757
                     /locus_tag="VIQ50_05045"
     CDS             1744..2757
                     /locus_tag="VIQ50_05045"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9359779.1"
                     /translation="MTQTIDVHAHILSEDTIRLLQREAPQVGPKLSDIGDQFATLEVA
                     GNIYRHFPRGGWDLERRLEDMAAARVDVQVLSVCPQTFVYRQPAAVAAAFARIQNEQL
                     AQLAKARPDRFLAIATLPMQAPSQAADELGHAVRVLGLRGAQIGSNIAGKNLDDPELE
                     PVWAAAAELGAFILLHPINVAGADRLSSYYLTNLIGNPLDTTIAAASLVFGGVLERHP
                     TLKICLAHGGGFVPYQAGRFVHGWHVRAEPKSKLTKPPTESLKRFYFDTIVHSKEALA
                     FLVGSAGAERVLLGSDYPFDMGMPEGVSQVRSLPVPAAGQSAILGGRARALLETAPAR
                     AFA"
     gene            2835..3236
                     /locus_tag="VIQ50_05050"
     CDS             2835..3236
                     /locus_tag="VIQ50_05050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY9359780.1"
                     /translation="MSQQQAARTPGAKRAGNGEYVFDLAKVNHILGGPDYSTANGACV
                     EGERMIVALMRMPAGTGAEPHSHPNEQWIYILQGTFRAKIGEQDVEAKAGSVIYVPAN
                     VVHSGKATADGDVVFFTCKEASHSLHGVKAA"
     gene            3378..4364
                     /locus_tag="VIQ50_05055"
     CDS             3378..4364
                     /locus_tag="VIQ50_05055"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9359781.1"
                     /translation="MKRFGLGLALVCLALSAATVSAQEKYPTRPVKIVVPYAPGGATD
                     ITARLFGEQMRQSLGQQFVIESKPGAFGILAIEEMARSKPDGYTLMVGNVTTNAITPV
                     LFPKKLSINFEKEVVSVSRLAIYPSFLLTTTHDFEPKSVAELVAYAKKNPGKVRYTSA
                     GVGSFPHFDTEVFSRRAGIEMLHIPNKTGAAGMINDLVVGDAQVAFINAASTASMIKA
                     GKLRPIAVLAETRLADYPDVPTLAEAGFPGVGTLHWQSMLAPAQTPKEVLATLFKAIV
                     QAADAPQLQDAFKKQLVSVKPNASLEEAQSWLNSELAAWRKTVAEVKIDLTD"
     gene            4401..5381
                     /locus_tag="VIQ50_05060"
     CDS             4401..5381
                     /locus_tag="VIQ50_05060"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9359782.1"
                     /translation="MQRLTTLLLLVLALGGADATAQDKYPAKPVKVVVPFGPGSATDI
                     VMRIVGEQMRPILGQPLLIENKPGAFGILAIEEMARSRPDGYTLQIGNPGTNVLTPII
                     YKKKFKIDYDKDVTLVTRLSEVPLVLGATTKDFPAKTYAEFIAYAKANPGKVRYASVG
                     VGSNNHYDMEAFARWAGLVLVHLPNKGGGAAITNDLVTGDAHVALLNAASSMGVVKAG
                     QVRALAVMSDQRVPEYADVPTLMELGYPNAKGLWSALYAPAATPRDVLEIVREAAVQA
                     LASEQVTTAFKQQMIRAVPSASLADAQAWNKAEVAYWKKVTDEVKIDLPD"
     gene            5482..5847
                     /locus_tag="VIQ50_05065"
                     /pseudo
     CDS             5482..5847
                     /locus_tag="VIQ50_05065"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
     gene            5876..>6585
                     /locus_tag="VIQ50_05070"
     CDS             5876..>6585
                     /locus_tag="VIQ50_05070"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEY9359783.1"
                     /translation="MKAIIPWEGFADLYRDALFHGGLLSLFMPNWYLAHLMHHVVGRA
                     SRHHPNRWRSDTLQFWLSNTLDSGAFRGAQAQWDKITVPMLSVGNWTGMGLHLRGNTE
                     AFMRAATPHKKLRIHAGTHVHPFYSEEGRRDQLRFFDCWLKGIDNGVMQEPPVRLAIR
                     KGRDEVEWRFEHEWPLARTRWTKFYFDLSQLVPGGSDTAGRLLGANPSASASRTYPAT
                     SLGSMGSTSAASSQVMGGA"
BASE COUNT         1206 a         2135 c         2105 g         1139 t
ORIGIN      
        1 ccagcgtctc ccggccggtc aactcccagt cgccggtcgc ggcgcggcgc gcaaacgtct
       61 cccagcggtc ggtccaatcg cccaggccgt aaccgtgcca gggcgactgc acgctgagcg
      121 gataaaggtc gagttcctcc cacagtgcgc gcgcgtgctc catgtattcg cgcgtcggca
      181 acgcgagcgg ggccatcgga tatttgcgcg tggcgtcgac cagcatgccg gaatcggtgg
      241 ttttcgggcc gtattgcgcg ccctgcaccc cgccgcgatg aggcacgagg tgtacgtcct
      301 cgatcggatt ggtgcgatac gcgagcgacc acagcaccgc gtccatgctg gcgggatcga
      361 tatcctcgct gacggcgatg acaatctttc cgcaattgga ctgcaaggtc gctgtgccgt
      421 gcagcgcgcg ccagacttca ctgcgcggca ccccctcagc gagctgaacg aaaatgacag
      481 ggcgaaggtt ggtcagccgc tcatgcatca tcacgcggcg aacacccttg atgcccaagc
      541 gatcgcgcag atggctgaga aacagcggct cgtaggcgac ttttttgacc acgctggatt
      601 cgctcggcgt cacctggctg atgatcgagg caaagaccgg cgcgcgcttg tgggtaatgg
      661 cagtcacgcg catcggcatg ttgtaggctt cgagcgccac gtagccgttg ctctcgccga
      721 acggcgcttc gggctcgagc ttgtcgggat cgatcagccc ttcgatcacg atttccgccg
      781 acgccggcac gtaaaggtcg actgtggcgg cctttgccgt ctcgatcggg cagccggcga
      841 gcgcgccggc gacgccgagt tcgtccatgt cgatggcaag cttctgcggc ccggtgaaca
      901 tgaccaccgg cgcgcagccg atcacgatcg cgatcggcat cacatcgcgc cgcttgcggt
      961 atttcagcca atgcaaatag ccgccggcgc cgctcgcctc gcgcgccacc atgcgcacga
     1021 ccaatcgatc gggggctttg agcgcggcgc ggtacgtgcc catgttctgg acgccgctgt
     1081 cggggtcgcg cgtcacgcac agcgtcgccg tcaggtacgg cgcggaatcg aagccgggcg
     1141 tcgataccgg cacaggcaac cgcgcaagcc cgcccggcgc cttgagatca tcgcccgtga
     1201 gcacgacctc ctggcaacgc ggcgcgccga ccaccacggg cgcgatcgga ttggcgattg
     1261 cgcgcatcca agcctcgccg atatcgccga ccgcctggcc catgccgatg gcgtagatgt
     1321 cgggtgaggc tgcgagcgcg ccgaccgcca ctggaatgtc gtatcgccgc cctttcgagt
     1381 ccgtcacatg cgtgaacaag aaagcgcgcc gcttgtcctc cggcacgccg ccgagaaatt
     1441 gccagcgcac caacggatgc agttcggtgt ctttgttgat gggacgatcg acgcgaacga
     1501 gaaggccttt tgcctcgaga tccgcgagat ggtcctgaaa atcgagtcgc ggatggtcct
     1561 gcaagcggat gtgatgcgag gcggcgggct gatcgagcat gtcgagactt cggtcgctac
     1621 cgttgccccg caacctacca cgttcgcgcc agcatcagct actcgatccg gccaccggga
     1681 tggattaggc tctcggtctc tcccggcctc tttcctcgag caacggatcc taatggtagc
     1741 ccaatgacgc aaaccatcga cgttcacgcc cacatcctgt ccgaagatac catccggctg
     1801 ctgcagcgcg aggcgccaca ggtgggcccg aagctctccg acatcggcga ccagttcgcc
     1861 acgctcgagg ttgccgggaa catctatcgg cattttcccc gcggtggatg ggatctggag
     1921 cgccggctgg aggacatggc ggcagccagg gtcgatgttc aggtgctctc ggtttgtccg
     1981 cagaccttcg tctatagaca acccgcggcg gtggcggcag cctttgcccg cattcagaac
     2041 gagcagcttg ctcaacttgc caaggctcgc ccggaccgct ttcttgcgat tgcgaccttg
     2101 cccatgcagg cgccgagcca ggcggcggac gagcttggtc acgcggtgcg cgtgctcggc
     2161 ttacgcggtg cgcagatcgg ctcgaatatc gcaggcaaga acctggacga tcccgaactc
     2221 gagccggttt gggcggcggc ggcggaactc ggtgcgttca tcctgctgca tcccatcaac
     2281 gtggccggcg ccgatcgcct gtcgtcctat tatctcacca acctgatcgg caacccgctc
     2341 gacaccacca tcgccgccgc atcgctcgtg ttcggcggcg tgctggagcg ccatccgacg
     2401 ctgaagattt gcctcgctca tggcggcggc ttcgtgccct accaagccgg acgtttcgtg
     2461 catggctggc acgtgcgcgc ggaacccaag agcaagctca ccaaaccgcc gaccgagtcg
     2521 ctcaagcgct tctatttcga taccatcgtg cactcgaagg aggcgctcgc gtttctcgtc
     2581 ggcagtgccg gcgccgagcg cgtgctgctc ggcagcgatt accccttcga catgggcatg
     2641 ccggaaggcg tatcgcaggt tcgcagcctg ccggttccgg ccgccggcca gtccgccatt
     2701 ctcggcggac gggcgcgggc actgctcgag acggcgcctg cgcgggcgtt cgcctgacgc
     2761 gatggttcgc agccgcgcat cctcttcaaa tgaggagagc ttgcggaaag gccgagagaa
     2821 cggaggagac aagcatgtcg caacagcaag cggcgcggac gcccggcgcg aaacgcgcgg
     2881 gcaacggcga atacgtgttc gacctcgcca aggtcaacca catcctcggg gggcccgatt
     2941 attcgaccgc caacggcgcc tgcgtcgagg gagagcgcat gatcgtggcg ctgatgcgca
     3001 tgccggccgg caccggcgcc gagccgcatt cgcatcccaa cgagcaatgg atctacatct
     3061 tgcagggcac gtttcgagcc aagatcggcg agcaggacgt cgaagccaag gcgggatcgg
     3121 tgatctacgt tcccgccaac gtggtgcact cgggcaaggc gacggcggac ggcgacgttg
     3181 tcttcttcac ctgcaaggaa gcgtctcaca gcctgcacgg cgtcaaggcg gcgtgacact
     3241 ttcgcgcagc atgaatgcgc tggacgatac gataggttaa cgcggcgggc gggaggcgac
     3301 ggcagcgccc ggccgaggac tgtcaggacc ggcagaggcc cccgggcggc catgtgcgcc
     3361 aatcacggga ggatgcgatg aaacgcttcg gtttgggtct ggcgctcgtt tgcctcgcat
     3421 tgagtgccgc caccgtctcg gcgcaggaaa aatatcccac gcggccagtg aagatcgtcg
     3481 tgccctatgc ccccggcggc gcgaccgaca ttaccgctcg cctgttcggc gagcagatgc
     3541 gccaaagcct cggccagcag ttcgtgatcg agagcaagcc gggtgcattc ggcattctcg
     3601 ccatcgaaga gatggcgcgc tccaagcccg acggctacac gcttatggtc ggcaacgtga
     3661 cgaccaatgc cattacgcca gtcctcttcc cgaagaaact ctcgatcaat ttcgagaaag
     3721 aggtggtgtc cgtttcccgg cttgccatct atccgtcctt tctcctcacc accacgcatg
     3781 atttcgagcc caaatcggtg gcggagttgg tcgcgtatgc aaagaagaat ccgggcaagg
     3841 tccgctacac cagcgccggc gtcggcagtt ttccgcattt cgataccgag gtcttctcca
     3901 ggcgcgccgg catcgagatg ttgcacattc ccaacaagac cggcgccgct ggcatgatca
     3961 acgatctcgt tgtcggcgac gcgcaggtcg cgttcatcaa tgccgcgagc acggcctcca
     4021 tgatcaaggc cggcaagctg cggccgatcg cggtgctggc ggagacgcgg ctcgcggact
     4081 atcccgatgt ccccacgctg gccgaggccg gatttcccgg tgtaggcacg ctgcactggc
     4141 agagcatgct ggcgccggcc caaacaccga aagaggttct ggcaaccctc tttaaggcga
     4201 tcgtgcaggc cgcggatgcc ccgcagctgc aggacgcctt caagaaacag ctcgtcagcg
     4261 tcaagcctaa cgcgtcattg gaggaggcgc agtcatggct caatagcgaa ctcgccgcct
     4321 ggcgcaagac ggtcgctgag gtgaagatcg acttgaccga ttagcgcggg cgtgacgacg
     4381 ccggcgccgg atcaacccac atgcagcgct tgaccaccct gttgttgctc gtccttgcgc
     4441 tcggcggcgc cgatgcgacg gcacaggaca aatatccggc gaagcccgtg aaggtcgtcg
     4501 tgccgttcgg cccagggagc gccaccgata tcgtcatgcg catcgtcggc gagcagatgc
     4561 gcccgattct gggccagccg ctgctgatcg aaaacaaacc gggagcgttc ggcattcttg
     4621 cgatcgagga gatggcccgt tcgaggcccg atggctatac gctgcaaatc ggcaatcccg
     4681 gcaccaacgt gctcaccccc atcatctaca agaagaaatt caagatcgac tacgacaagg
     4741 acgtgacgtt ggtgacacga ctgagcgaag tgccgctcgt gctcggcgcc acgaccaagg
     4801 actttccggc caagacctat gccgagttca ttgcctatgc caaagccaac cccggcaagg
     4861 tgcgctacgc cagcgtcggc gttggcagca acaatcacta cgacatggag gcctttgccc
     4921 gatgggccgg cctcgtgctc gtccacttgc ccaacaaggg cggcggagcc gcgatcacca
     4981 acgatctcgt caccggcgac gcccatgtcg cgctactcaa cgccgcaagc tcgatgggcg
     5041 tggtcaaggc cgggcaggtg cgggccttgg cggtgatgtc ggaccagcgc gtgcccgagt
     5101 acgccgatgt gccgacgctg atggaactcg gctaccccaa cgccaagggc ctgtggtcgg
     5161 cgctgtacgc gccggccgcc acgccgcgcg acgtgctcga gatcgtgcgc gaggcggccg
     5221 tgcaggccct cgcctccgag caagtgacga cagccttcaa gcagcaaatg attagggccg
     5281 ttcccagcgc ctcactcgca gacgcgcaag cgtggaacaa agccgaggtg gcatattgga
     5341 aaaaggtcac cgacgaggtg aagatcgacc tgccggattg aaccggatgg gggcagcggg
     5401 gaaagagcgg caatgaagat ggagccggcg gccggcgcgc tcgactacgg catcgtcgtc
     5461 gagaaggacg tcgacgtgcc catgcgcgac ggcgcccatc tcaacgccga tgtgtttcgg
     5521 cccgatgctg gcggggcgtt tcctgccatc ctcaatttgg gtccttatca gaaggacaag
     5581 ctgtggattc cgccgagcaa tctcgaggaa gacccgaacc cgctgatgaa ctgggagacg
     5641 gtcaacccgc aatggtgggt gcccaagggc tatgcggcgg tgcgcatcga cgggcgcggc
     5701 agtggcaaat cccccggcca gtgcgaaccc tggtcgctct cggagtcgat cgacttctac
     5761 gatgcgatcg agtgggcggc ggcgcagccg tggtgctcgg gcaaggtcgg gttgctgggc
     5821 atatcctatt tcgccatcaa ccagtggttc gtcgcccaac caccagccgc cgtcgttgaa
     5881 ggcgatcatt ccgtgggaag gttttgccga cctttaccgc gatgcgctgt tccatggcgg
     5941 actgctcagc ctgttcatgc ccaactggta cctcgcgcat ctcatgcatc atgtcgtcgg
     6001 ccgcgcctcg cggcaccatc cgaataggtg gcgctccgat acgctgcagt tctggctcag
     6061 caacacgctc gatagcggcg cattccgcgg tgcgcaggcg caatgggaca agatcactgt
     6121 gccgatgctc agcgtcggca attggacggg aatgggattg catctgcgcg gcaacaccga
     6181 ggcgtttatg cgcgccgcga cgccgcacaa gaagcttcgc atccacgccg gcacgcacgt
     6241 gcacccgttc tactccgagg aagggcggcg cgatcagctg cggtttttcg attgctggct
     6301 caaaggtatc gacaacggcg tgatgcagga gccgccggtg aggcttgcga tccgcaaggg
     6361 ccgggacgag gtggaatggc gcttcgaaca tgagtggccg ctcgcgcgca cgcgctggac
     6421 caagttctat ttcgatctgt cgcagctggt gcccggcggg agcgataccg ccgggcggct
     6481 cctcggggcc aatccctccg catccgcctc gcggacttat cccgccacca gtctcggctc
     6541 gatgggttca acgtccgcgg cctcctcgca ggtcatgggc ggcgc
//
LOCUS       DATCWM010000263         4354 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_428792, whole genome shotgun sequence.
ACCESSION   DATCWM010000263 DATCWM010000000
VERSION     DATCWM010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4354)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4354)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4354
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_428792"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(252..1229)
                     /locus_tag="VIQ50_05075"
     CDS             complement(252..1229)
                     /locus_tag="VIQ50_05075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9359784.1"
                     /translation="MTFPRRNFLHLAAAAAAMGAAMRLATAQAYPARPVRIISGFPPG
                     GVNDTYARLIGQWLSERLGHQFFVENRPGAGGNIAAETLVRAAPDGYTLLLATSADAW
                     NATLYDNLKFSFVRDVAAVAPIVRAPGVLVVHPSLPVKSVPELIASAKANPGKISVAS
                     AGIGSAPHMYWELFRTLAGVDMLHVPYRGGGPAVTDLLGGQVQVYFGTTASSIEYVRS
                     GKLRALAVTTATRAAALPDVPALAEFLPTYEASIFVGIVAPRGTPADIVGTLSREINL
                     ALADEKMTLRIAELGDTPLALSSSDFERLIAEEAEKWGNVIRSAKLRAE"
     gene            2231..3463
                     /locus_tag="VIQ50_05080"
     CDS             2231..3463
                     /locus_tag="VIQ50_05080"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005743 - mitochondrial inner membrane
                     [Evidence IEA];
                     GO_component: GO:0035632 - mitochondrial prohibitin
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prohibitin family protein"
                     /protein_id="HEY9359785.1"
                     /translation="MKAYLWPVDGTPAPAPPSRWRRFIDRHLPSVVIYLMVATLVGVV
                     LYPHMVITVPSGYVGVLWKRFGGGTVLDPRRLKNEGFNLILPWNSVFLYDLRLQSFTE
                     SYNAISSDGVNLAATVIVRFRLQRDSVPVLHQAIGPDFKKVLVMPGIGSLTREVIAQY
                     TAEQVYSTARQEIQDKIRNLVEARLSEKMMEHEGDEESYRVSMREIIILYDILVTGIE
                     LPAAIVAAINRKTEQYYIAEEYKFRVEREKRESERKRIEAEGIRDFQQTVSQGISDSY
                     LRWRGIEATLQLSQSTNSKVVIIGSGKDGLPIILNTDTAAPAAAATPAEDTTGKQRTT
                     AAGPAVPLEKTPADALATPSEKIPPMAPATPPAAAPSTSSVAMAEEPRSFWPLSLATI
                     KSYLLNWLGATEPKTATP"
     gene            complement(3512..3979)
                     /locus_tag="VIQ50_05085"
     CDS             complement(3512..3979)
                     /locus_tag="VIQ50_05085"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEY9359786.1"
                     /translation="MARKLSHYPGTRDLEHLRAVRRTPSAEARSRHPRFARTVSERDA
                     DTARQEQKRARERICALVEPGTVLALPTAPCIAPRIDTSAEALESFRVRVMRLTCLAG
                     LSGLPQVTLPVGSVSGCPVGLSFIAWHGGDEALLDLAVRLARHVGGASDPGQK"
     gene            complement(4246..4299)
                     /locus_tag="VIQ50_05090"
                     /pseudo
     CDS             complement(4246..4299)
                     /locus_tag="VIQ50_05090"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          826 a         1371 c         1425 g          732 t
ORIGIN      
        1 tcactccttg cgttcgcccg atctgctcgc cgagcaggcg agccagagcg tcggtcacgc
       61 cgcccggcgc ggacggcacg accagcttga ttgttctcgc cgtctgcgac cgcgcgctat
      121 gtgcgagggc aaggaatgga aacggggcag cgcccgcgca gagatgcaga catccacggc
      181 gggaaagttg cacgggttcc ctgcccattt gtgccgggcg cgccggacgt tccggcgccg
      241 agtcgaagcg cctactccgc cctgagcttg gccgagcgaa tcacgttacc ccacttctcg
      301 gcttcctcgg cgatgagacg ctcgaagtcg gagctcgaca gcgccagcgg ggtgtcgccg
      361 agctcggcaa tccgcagagt cattttttcg tcggccagcg cgagattgat ctcccggctc
      421 agcgtgccaa cgatgtcggc cggcgtgccg cgcggcgcaa cgatgccgac aaagatgctc
      481 gcctcgtaag tcggcaggaa ttccgccaga gccgggacat cgggcaacgc ggccgcgcgg
      541 gttgcggtgg tcacggccaa ggcccgcagc tttcccgacc ggacatattc gatcgacgat
      601 gcggttgtgc cgaaatacac ctgcacttgg ccgccgagaa ggtccgtgac cgccggcccg
      661 ccgccgcgat agggcacatg cagcatgtcg acgccggcca aggtccggaa cagctcccag
      721 tacatgtggg gcgcgctgcc gatgcccgcc gacgccacgg agattttgcc cggattggct
      781 ttggcagaag cgatcaactc gggaacggat ttgaccggca gcgacggatg cacgacgagc
      841 actccggggg cgcggacaat cggcgcaacc gcagcgacgt cgcgaacgaa actgaatttg
      901 agattgtcat agagcgtcgc gttccacgcg tcggccgacg tggcgaggag cagcgtgtaa
      961 ccgtcgggcg ctgcccgtac gagtgtctcc gcggcaatgt tgccgcccgc acccggccgg
     1021 ttctcgacga agaattgatg gccgagccgc tccgacagcc attggccgat gagccgcgca
     1081 tatgtgtcgt tgaccccgcc cggcggaaag ccggagatga tccgcaccgg acgcgccggg
     1141 taggcttgcg cggtggccaa gcgcatcgca gcccccatcg cggcggcggc cgcggcgaga
     1201 tgcaggaagt ttcgacgtgg gaatgtcacg gtttctctga cggcgatgaa ggggagtcgc
     1261 agcgccaaac ggcgggcagc ccgccgggag ttctgcaacc aatataccga gcgccaattt
     1321 atgcgaaaga ggggccggcg cttttcccgc gttcgatgga gcctacgcgc acttgaaatg
     1381 gtcctgcgtt tcgacgtagc gcgcggccct gaccaaaacg aatcgcggtt gaccgcaccc
     1441 ccggcatggc gggaaacgct tgccgaacag gcaagtcact tcatgttcct gtgcatggat
     1501 gggatcgtgg accacccgat agattcctga atgcggcacg gcgtcccccg gcctgaattg
     1561 agcgccaatc ggggccatgg ctcaatctcc atcgtatgga cttgaggcac tctccatcag
     1621 ccgagcgcgg aactctttgt tgttggactt gcgcgcgcct gtcgcaggcc ctcctcgcta
     1681 ttattgcaga attcgatttg tcgtacagag cacggttgcc aattgagtaa gcaacgctgc
     1741 ggttttgcgc cgatcaggcc gcgtctgaaa cacgcactcg gagctacggc ttgatcggcg
     1801 cggggggtgc acatggccgc aaaccaaggc caggcataga gagcttccac ggcagagccg
     1861 ggctgcttct catcctgcat tcgctcggct atgctcggca gcattgccgc tacagcggct
     1921 ggtgagggac aaatggcaag caaacgagct agacgcgtca aacgccgggc ctggtcaagt
     1981 gccgatgtac gagagttgaa aacgcactct cgcaagaagt cgccggtaaa acggattgcg
     2041 aaggccatga agcgcacggc gggggcgctt cggcaaaagg cgctcagcct cgggttaccg
     2101 ctgggccatc gccggtgagc cgccggcttt gccggtgacc atggccctgc tggcttgagg
     2161 agttggtctt gccgttcgca ggcgtatgca agacggcggt ttcgtcgggc ggcagacgat
     2221 ggagagtgag ttgaaagcgt atctttggcc agtcgatggc acgcccgccc ccgccccacc
     2281 gtcccggtgg cggcggttca tcgatcgcca tctgccgagc gtggtgatct acctgatggt
     2341 cgcgacgctc gtgggggtgg tgctttatcc ccacatggtg atcaccgttc ccagcggcta
     2401 tgtcggagtg ctgtggaaac gctttggcgg cggcaccgtg ctcgatccgc ggcggctgaa
     2461 gaatgagggg ttcaacctca ttttgccttg gaacagcgtg ttcctgtacg acctgaggct
     2521 gcaatcgttt acggaatcct acaacgccat ctccagcgac ggcgtgaatc tggccgcgac
     2581 ggtcatcgtc cgctttcgat tgcagcgcga ctcggttccg gtgctgcatc aggcgattgg
     2641 accagatttc aagaaggtgc tggtgatgcc gggcatcggc agcctgacgc gcgaggtcat
     2701 cgctcaatac acggccgaac aggtctattc gacggcgcgc caggaaattc aggacaaaat
     2761 ccgcaacctt gtggaggcca ggctgtcgga aaagatgatg gaacacgaag gcgacgaaga
     2821 gtcgtaccgc gtctccatgc gcgagatcat catcctctac gacatactgg tgaccggcat
     2881 agagctgccc gcggccatcg tcgctgccat caaccgcaag accgagcagt actacatcgc
     2941 cgaggaatat aagttccgcg tggagcgcga aaaacgagaa tcggaacgca aaaggatcga
     3001 ggcggaaggc atacgcgact ttcaacagac cgtcagccag ggcatctcgg actcctacct
     3061 gcgctggcgc ggcatcgagg caacgcttca gctttcacaa tcgacgaatt cgaaggtcgt
     3121 gatcatcggc agcgggaaag atggtttgcc gatcatcctg aacacggaca cggctgcgcc
     3181 cgccgcggca gccacgccgg ccgaggacac gaccggcaag caaaggacga cggccgcagg
     3241 gccggcggtg cccctggaga agacgcctgc cgacgccttg gcgaccccct ccgaaaagat
     3301 accgccgatg gctccggcca ctccgcctgc agctgctccg tctacttcgt ctgttgctat
     3361 ggcggaggag ccacgctcgt tctggccgct cagtctggcg acgatcaagt cctatctttt
     3421 gaattggttg ggcgcgacgg agccgaagac ggcgacgcct tgaaatcggc cggccgagag
     3481 gtcggcagca gttcggatca cccgtgggcc tttacttttg gccagggtcg gatgcgccgc
     3541 cgacgtggcg cgcgagccgc accgccaaat cgagcagcgc ttcatcgccg ccgtgccaag
     3601 cgatgaagga gaggccgacc gggcagccgg agaccgaacc caccggcaag gtgacctgcg
     3661 gcagtccgct caatccggca agacaggtca gccgcatgac gcgaacgcga aacgattcca
     3721 gcgcttcggc gctggtgtcg atgcgcgggg caatgcacgg cgccgttggc agcgcaagaa
     3781 cggtgccagg ctcgaccaat gcgcaaatgc gctcgcgcgc ccgcttctgt tcttgccggg
     3841 ccgtgtcggc gtcgcgctcc gatactgtcc tcgcgaaccg cggatgccgg gaccgagctt
     3901 cggccgatgg cgttcgacga acggcccgta gatgctccag atctctcgtg cctggataat
     3961 gcgaaagctt tcgcgccagg catcgaagcc gcccggcgcg acggctttat ggctgggctc
     4021 gggaaggtcg ctcgccatcg cgtcgattgc cgcgcgcagc aaggaagcga cctccgcgtc
     4081 cgcctccgcg aaggcatcgt cgagaacgat caactggttc ggtttggcgc gcacgccggc
     4141 accttcgagc agcacctcgc cgacgcgccg caagacgcca gggccgctgg cgaaccaccc
     4201 gggcacatcg aaggacggcg ccatcggcat gacgccggtg atgtcgatgc gtccgtgggt
     4261 cgggcgtatg ccgtagacgc cgcagaaggc ggccggcacc cgaaccgagc cgccggtatc
     4321 gctgcccagc gcgaaatcgc aggcgccggc ggcc
//
LOCUS       DATCWM010000264         2766 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_417973, whole genome shotgun sequence.
ACCESSION   DATCWM010000264 DATCWM010000000
VERSION     DATCWM010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2766
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_417973"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..186)
                     /locus_tag="VIQ50_05095"
     CDS             complement(<1..186)
                     /locus_tag="VIQ50_05095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine-
                     carboxypeptidase/endopeptidase AmpH"
                     /protein_id="HEY9359787.1"
                     /translation="MTPTSNTRRLAAAVALLFAAASPARAEDIVLKDAASMSGGVMWL
                     SSGAPGLVLAAVRGDDAV"
     gene            607..1596
                     /locus_tag="VIQ50_05100"
     CDS             607..1596
                     /locus_tag="VIQ50_05100"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359788.1"
                     /translation="MNRRDFITLLGGAAAAWPLAARAKQAEGMRRIGVLMGYPEGDPQ
                     AQANVTALLRGLEDLGWIEGRNVQIDCRWAGGDPDKARAFARELIAMMPGVLVPSTNQ
                     VTQILQQETRTIPIVFAFVGDPVGSGFAASLARPGKNITGFANFENSIGGKWLELLKE
                     IAPRTERVGFVFNPDAAPNVGFFHAAEAAAPSLGIKLAALPVRDASDIEQDVTAFASA
                     PDGGLVVAPHAVTLGNRKLIIELAARYRLPAIYSDRYFAESGGLASFGNNSADLFRRA
                     ATYIDLVLKGANPADLPVQLPTKFELMVNLKTAETLGLTISESFLIRADGVIE"
     gene            complement(1689..>2766)
                     /gene="lepA"
                     /locus_tag="VIQ50_05105"
     CDS             complement(1689..>2766)
                     /gene="lepA"
                     /locus_tag="VIQ50_05105"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HEY9359789.1"
                     /translation="VFTPKMVNVDELGPGEIGFLTASIKEVADTRVGDTITDDRKPVS
                     TPLPGFRPAIPVVFCGLFPVDAAQFEDLRAAMGKLRLNDASFTYEMETSAALGFGFRC
                     GFLGLLHLEIIQERLEREFNLDLIATAPSVIYKITLTNGSQLEIHNPVDMPDPVRVRE
                     MEEPWIRATIMTPDEYLGSVLKLCQDRRGAQIELTYVGSRAMVKYDLPLNEVVFDFYD
                     RLKSVSKGYASFDYQLTDFRLADLVKMQILVNGDPVDALAMLVHRTRAESRGRAMVEK
                     LKELIPPHMFQVPIQAAIGGKIIARETVRALRKDVTAKCYGGDVTRKRKLLEKQKEGK
                     KRMRQFGKVEIPQEAFIAALKVDV"
BASE COUNT          492 a          865 c          879 g          530 t
ORIGIN      
        1 gacggcgtcg tccccgcgca cggccgcgag cacgaggccg ggagcgccag aactgagcca
       61 catcaccccg ccgctcatgg acgcggcgtc cttgagcaca atgtcctcgg cgcgcgccgg
      121 cgaggcggcg gcaaacagca aagcaacggc cgcggctagg cggcgtgtgt tcgatgtcgg
      181 ggtcatgggc gctcgcgagt cgggggggac gattcccgca ggatagcatg agcgggcgct
      241 ggctcgccgg ccgcgcccgc gcatgtggag agggggtcgc catatgaagc tgccctgcga
      301 ctgggaccga atcggcgcgt tttcctcgcc gagctcgcct gtgccgccgt ctataatcgg
      361 cggctatagg aacggctcag gcaatctcca gggaatctcc aggaaaaccg cagccgggct
      421 gcaagcctct cctccggctt attgctaaag aactattttt cgcggcaatc gcggacagtg
      481 gtccggtttg gtcggactct agacctagcc gggctcattc aggctcgagt cacgccggac
      541 attggcgacc tgagggcagg cgttagttca cacatccatt ctgctgcctg cggacgaggt
      601 gatggattga atcggcgcga tttcatcacg ctgctcggcg gcgcggcggc tgcatggccg
      661 ctcgccgcgc gtgcgaagca ggccgagggg atgcggcgca tcggcgtgct catgggatac
      721 cccgaaggtg atccccaagc tcaagccaat gtcacagcgc tgttgcgagg cctcgaagac
      781 ctaggctgga tcgaaggacg caatgttcag atcgactgtc gttgggctgg cggcgatcca
      841 gacaaggctc gcgcctttgc acgagagctc atcgccatga tgcccggcgt gctggtgccc
      901 agcacgaacc aagtgacaca gatccttcag caagaaacgc ggaccatccc gatcgtattc
      961 gcgttcgtcg gcgacccggt tggcagcggc tttgcggcca gcttggcgcg tcccggcaag
     1021 aacatcaccg gctttgccaa ctttgagaat tcgattggag gtaaatggct tgagttactc
     1081 aaagagattg cgcctcgcac cgaacgagtc ggcttcgtct tcaatcccga cgctgctccc
     1141 aatgtgggtt tcttccacgc ggccgaagca gctgctccgt cactcggaat aaagttggcc
     1201 gccctccctg ttcgagacgc gtccgacatc gagcaggacg tcaccgcatt cgcctccgcg
     1261 ccggacggcg gccttgttgt cgcgccgcat gccgtgacgc tcggaaaccg caagctcatc
     1321 atcgagctcg cggcccgata ccgcctcccg gcaatttata gcgatcgtta tttcgcggag
     1381 agcggaggct tggcatcgtt cggcaacaat tcggcggatc tattccggcg cgcagcaaca
     1441 tatatcgatc tcgttctcaa gggtgcgaac cccgcggacc tgccggttca gttgccgacc
     1501 aaattcgagc tgatggtaaa cctcaagact gcagagacac tcgggttgac catttcggaa
     1561 tcgtttctca tccgcgccga cggggtaatc gaataacggt agttttttct ccggtgtgtt
     1621 ggacgcgctg gcacgtcgcg ccattttcgc gtgcgcaggc aggtcgcccg ccgccggcaa
     1681 tcatgcgctc acacgtcgac cttgagcgcg gcgatgaacg cctcctgcgg gatttcgacc
     1741 ttgccgaact ggcgcatgcg cttcttgcct tccttctgct tctccagaag cttgcgcttg
     1801 cgcgtcacgt cgccgccata gcatttggcg gtgacgtcct tgcgcaacgc gcgcacggtc
     1861 tcgcgcgcga tgatcttacc gccgatggcg gcctggatcg gcacctggaa catgtgcggc
     1921 gggatgagtt ccttgagctt ttccaccatc gcgcggccgc gactctccgc gcgcgtgcga
     1981 tgcaccagca tggccagcgc gtcgaccgga tcgccgttga ccagaatctg catcttcacc
     2041 aggtccgcca aacggaagtc ggtgagctga tagtcgaacg aggcgtagcc cttcgacacc
     2101 gatttgagcc gatcgtagaa gtcgaacacc acctcgttga gcggcaggtc gtatttcacc
     2161 atcgcgcggc tgcccacgta ggtcagctcg atctgcgcgc cgcgccggtc ctggcaaagc
     2221 ttgagcacgc tgccgagata ttcgtccggg gtcatgatgg tggcgcggat ccagggctcc
     2281 tccatctccc tgacgcgcac gggatccggc atgtcgacgg gattgtggat ttcgagctgg
     2341 ctgccgttgg tcaaggtgat cttgtagatg accgaggggg cggtcgcgat caggtcgagg
     2401 ttgaactcgc gctcgagccg ctcctggatg atctcgaggt gcagcagccc caaaaagccg
     2461 cagcggaagc cgaagccgag cgcggccgag gtctccattt cgtaggtgaa gctcgcgtcg
     2521 ttgagccgca gcttgcccat ggccgcgcgc aaatcctcga attgcgcggc gtcgaccggg
     2581 aacaaaccgc agaatacgac tggaatcgcc ggccggaagc cgggcagcgg cgtgctcacc
     2641 ggtttgcggt cgtcggtgat ggtgtcgccg acgcgggtgt ccgccacctc tttgatcgag
     2701 gcggtgagaa agccgatctc gccggggccg agctcgtcga cgttcaccat cttcggcgtg
     2761 aacacg
//
LOCUS       DATCWM010000265         2538 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_428799, whole genome shotgun sequence.
ACCESSION   DATCWM010000265 DATCWM010000000
VERSION     DATCWM010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2538
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_428799"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            329..760
                     /locus_tag="VIQ50_05110"
     CDS             329..760
                     /locus_tag="VIQ50_05110"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008840092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEY9359790.1"
                     /translation="MANLVYRRQFTVEWGHCDPAGIVFNRRFFEYFDWSAWQLFEAAL
                     NVKPNELATAFGIVGIPLVGAKARFHRPAKFNDVADIASEVSEFRRSSFEVTHHISIG
                     GALAVEGSETRVWAGRDPDDPVKMKGVPIPAAVIARFRAAA"
     gene            849..>2538
                     /locus_tag="VIQ50_05115"
     CDS             849..>2538
                     /locus_tag="VIQ50_05115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridine nucleotide-disulfide oxidoreductase"
                     /protein_id="HEY9359791.1"
                     /translation="MSESLSLAFDLRFEDLYRRDGLARLDGCFVEFLKGRNTDLHNRL
                     MAGRAAPEGVAGKDYSDLIVELAVELEDFIAALFGIARDVAALRSRHDALAPLYAVKR
                     LFVQRRAAKKYSPEQAATFDGQALGAQLETLIGGELTEWRFAERVEAWMKAEAERAAA
                     LDLAARYAAWATHTPQGQRRHNDGVLFKLPRKVDPHHLVAVETEVVDGIAMLKLPASH
                     RRARDGFALTDPGTDLAGALDHANYCIWCHNQGKDSCAKGLREKSGEFKKSAFGVVLA
                     GCPLEEKISEMNLVEAGGHTVGALAIVVLDNPMCAATGHRICNDCMKACIYQKQEPVD
                     IPQVETRILKEVLALPWGFEIYGLLTRWNPLDLRRPVPKPPTGRKVLVVGLGPAGFTL
                     AHHLINDGHTVVAVDGLKIEPLDPGISGVAVSGARSAFRPIREVAELREPLDARVMAG
                     FGGVAEYGITVRWDKNFLKLIRLLLERRGEFAMFGGVRFGGTLTIDGAFALGFDHIAF
                     CAGAGRPTIVPMKNGLAAGVRQASDFLMALQLTGAARKDSVANMQVRLPVVVVGG"
BASE COUNT          423 a          835 c          848 g          432 t
ORIGIN      
        1 cgccgcagcg aagtgcaaag cgcaccgcgg cgagcgcggc gatggcgcac ggtcggccgt
       61 tcgcactcaa tacgctgccc gctacgcgca tcgacacgat ccgaacttcg acaatgagct
      121 tgaatgcccc cgcggaaacc attgcagttt ccggcccctg ccgccacttg attatgacgt
      181 gcccggaagg gcattagtcc ctgaaattgc ggcttaaacc ggtccggatc gggcccattc
      241 cgagcgggct gcgcgatttg acatccccgg cgcaggcggg ttttgtgccg ccaaccgtaa
      301 ggccccagta aggaaaccgg accagcgcat ggccaatctc gtctaccggc ggcaattcac
      361 ggtggaatgg ggtcattgcg acccggcggg catcgtgttc aaccgccgct tcttcgagta
      421 tttcgattgg agcgcgtggc agctgttcga ggcggcgctc aacgtgaagc cgaacgagct
      481 ggcaacggcc ttcgggattg tcggaattcc gctggtcggc gccaaggctc gctttcaccg
      541 gcccgccaag ttcaacgacg tggcggacat cgcctccgag gtcagcgagt tcaggcgctc
      601 gagcttcgag gtgacgcatc acatctcgat cggcggcgcg cttgcggtcg aaggcagcga
      661 gacgcgggtg tgggccgggc gcgatccgga tgatcctgtc aagatgaaag gcgtgccgat
      721 tccggccgcg gtcatcgcgc gatttcgtgc cgcggcttag gggctctcgt gcagcaaatt
      781 cccgattgcg ggtctggcga acgcgtgcca ttgggcgcat ctcggagcga tgaggatttc
      841 ttccatcgat gagcgaaagc ctttctctcg cttttgatct gcggtttgag gacctctatc
      901 gccgcgacgg gctggcgcga ctcgacggct gctttgtcga gttcctcaaa ggccgcaaca
      961 cggacctgca caatcggctg atggcgggcc gcgcggcgcc ggaaggcgtc gccggcaagg
     1021 actattccga tctcatcgtc gagcttgcgg tcgagctcga agacttcatc gccgcgctgt
     1081 tcggcatcgc ccgcgacgtc gctgcgctgc gcagccgcca tgacgcgctg gcgccgctct
     1141 acgcggtgaa gcggctgttc gtgcagcgtc gcgccgcgaa aaagtacagc ccggaacaag
     1201 ccgcgacatt cgacgggcag gccctcggcg cgcaactcga aacgctcatc ggcggcgagc
     1261 tcaccgagtg gcgcttcgcc gagcgggtcg aagcctggat gaaggccgag gccgagcgtg
     1321 ccgccgcgct cgaccttgcc gcgcggtacg ccgcctgggc gacccacacc ccgcaaggcc
     1381 agcgccggca caatgatggg gtgctgttca agctgccgcg caaggtcgat ccgcaccacc
     1441 tcgttgcggt cgagaccgag gtcgtcgacg gcatcgcgat gctcaagctg ccggcctccc
     1501 atcgccgcgc gcgcgacggt ttcgcgctga ccgacccggg aaccgatctc gccggcgcgc
     1561 tcgatcacgc caactactgc atctggtgcc acaaccaagg caaggattcg tgcgccaagg
     1621 ggctcaggga gaagagcggc gaattcaaga agagcgcgtt cggggtcgtg ctcgcgggct
     1681 gcccgctcga ggaaaaaatc tccgagatga atttggtcga ggcaggcggc cacacggtcg
     1741 gcgcgctcgc cattgtcgtc ctcgacaacc cgatgtgcgc cgccaccgga caccgcatct
     1801 gcaacgattg catgaaggcg tgcatctatc agaagcagga gccagtcgac attccgcaag
     1861 tggagacgcg catcctcaag gaggttctgg cgctgccctg ggggttcgaa atctatggtt
     1921 tgctgacgcg gtggaatccg ctcgatctgc gccggccggt gccgaagcct ccgaccggcc
     1981 gcaaggtgct ggtcgtgggg ctcgggcccg cgggcttcac gctcgcgcat cacctcatca
     2041 acgacggcca caccgtggtc gcggtggacg ggctcaagat cgagccgctc gaccccggca
     2101 tctccggcgt cgcggtgagc ggcgcgcgtt ctgccttccg cccgatccgc gaggtagccg
     2161 agctacgcga accgctcgac gcgcgcgtca tggccgggtt cggcggggtc gccgagtacg
     2221 gcatcacggt gcgttgggac aagaacttcc tcaagctcat ccgcctgctg ctggaacggc
     2281 gcggcgaatt cgcgatgttc ggcggcgtgc gcttcggcgg gacgctcacc atcgacggcg
     2341 ccttcgcgct cggcttcgat cacatcgcgt tctgcgccgg ggcagggcgg ccgaccatcg
     2401 tgccgatgaa gaacgggctc gccgccggcg tgcgccaggc ctccgacttc ctgatggcgc
     2461 tgcagctcac cggcgccgcg cgcaaggatt cggtcgccaa catgcaggtt cgcctgccgg
     2521 tcgtcgtcgt cggcggag
//
LOCUS       DATCWM010000266         2808 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_164244, whole genome shotgun sequence.
ACCESSION   DATCWM010000266 DATCWM010000000
VERSION     DATCWM010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2808
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164244"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1299)
                     /locus_tag="VIQ50_05120"
     CDS             complement(<1..1299)
                     /locus_tag="VIQ50_05120"
                     /inference="COORDINATES: protein motif:HMM:TIGR01845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HEY9359792.1"
                     /translation="MLSECTFPTARPDLAPDIPPKYGAGQGESAPPALDWWRGFRSRE
                     LTNLIEEAQLANLDIGAAIGRIIQADAQAKIIGAALLPEVDFAGFAERFRNAGAGVPE
                     RNLFHAALNASYEIDFWGKNRAFSRAAQETAVASRFNKEVVVLSTMAAVGNAYFQVLS
                     AQDRLRINQSNVEAASRILNLIKQRFEAGTASQLDVAQQESLVAQVRANIPIFDQAVR
                     QNIAVLAVLIGKPPVEVVIKGGNIYRLAIPRVTPGLPSELLFQRPDIRAAEANLASAD
                     ASVEAARAAFFPSISLTGQAGYESNVLKLLFTPQNAFYNIALNITQPLLDGFRLEGQL
                     ELAQGKQFELVKAYCQTILSGFGDVEIALIAIAESLERERLQQIVVNSSREAFRLSEA
                     RLREGTIDLVTVLQTQQTLFTAEDNYSLARLARLQAVLSLF"
     gene            complement(1658..2566)
                     /locus_tag="VIQ50_05125"
     CDS             complement(1658..2566)
                     /locus_tag="VIQ50_05125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007199049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEY9359793.1"
                     /translation="MTTTPMLPRERCDFSAIVDRPPLKLPGDARLVFWTIVNYEVWDI
                     GRPMPRQVLPAPTGVPLLPDVPHWSWHEYGMRVGAWRFFELYERLGLRPTLAINARTC
                     EDYARVAEEAKRLRWEFMGHAYDQMPIHKVEDQAAMINRSMDILERFTGTRPLGWLGP
                     GLTQTFETPELLVSAGVKYIGDWVYDDEPTVIRTAKGPLVTLPYTVEINDIGMMIIQH
                     HESEYLARRAIDQFDRLYAEGKNRAKIMALAIHPYISGQPHRIKYLEAIYDHARRFSG
                     VLHWNGAEIFDWYLAATKDAKSHVAA"
BASE COUNT          496 a          867 c          924 g          521 t
ORIGIN      
        1 aaagagactc aaaacggcct gcaaccgcgc aagccgcgcg agcgagtaat tgtcttccgc
       61 ggtgaacagc gtctgctgcg tctgcagcac ggtgacgagg tcgatggtgc cctcgcgcag
      121 ccgtgcttcc gagagccgga acgcttcgcg cgaactgttg accacgatct gctgcaaacg
      181 ttcccgctcc agcgactcgg cgatggcgat gagtgcaatc tccacgtcgc cgaagccgga
      241 gagaatggtc tggcaatatg ccttcaccag ctcgaactgc tttccctgcg ccaattccag
      301 ctgtccctcc agccggaaac cgtcgagcag cggctgcgtg atattgagcg cgatgttgta
      361 gaacgcgttt tgcggcgtga agaggagttt gagtacgttg ctttcgtatc cggcttggcc
      421 ggtcagcgaa atgctcggga aaaaggcggc gcgcgccgcc tcgacgctcg catcggcgga
      481 ggcgaggttg gcttcagcgg cgcggatgtc cgggcgctgg aacagtagct ccgagggcag
      541 cccgggagtg acgcgcggga tcgccagccg gtagatgttg ccgcctttga tgacgacctc
      601 gaccggcggc ttgccgatga gcacggcgag gacggcgatg ttctggcgca ccgcctgatc
      661 gaagatgggg atgttcgcgc gcacctgggc caccaggctt tcctgctgtg cgacgtcgag
      721 ttgcgaggcg gtgccggctt cgaaccgctg cttgatgaga ttgagaatcc ggctggccgc
      781 ctcgacgttg ctctgattga tccgcagtcg atcctgggcc gagaggacct ggaaataggc
      841 attgccgacc gccgccatgg tcgaaagcac gaccacctct ttgttgaagc ggctggcaac
      901 ggcggtttcc tgcgccgcgc gcgagaaagc ccggttcttg ccccagaaat cgatttcgta
      961 gctggcgttg agcgcggcat ggaacaggtt ccgctcgggt acgcccgcgc ccgcgttcct
     1021 gaagcgctcg gcaaaacccg cgaagtcgac ctcgggcaat aaggcggcgc cgatgatctt
     1081 ggcctgcgcg tcggcctgta tgatgcggcc gatagctgcg ccgatgtcga gatttgcgag
     1141 ctgcgcttcc tcgatcaggt tggtgagttc gcgcgagcga aagccccgcc accaatcgag
     1201 cgccggcggc gcggactcgc cctgtcccgc gccgtatttg ggcgggatgt cgggcgcgag
     1261 gtccggccgc gcggtgggaa aagtacactc ggacagcatt tgcacgagag ttaatcccat
     1321 aaacacgaca aagacggggc gaagggttcc cgcgccggcc gcccgggcac gcgtgcgcca
     1381 ccggtcgaac atgggaccga gtttcaacgc tatggacccc cgtggacacg gggctttagc
     1441 gttaacgcca cgcacgcctt ccccaaccgc ctgccagcca attcgccatc ctatcagccc
     1501 gacccgcccc gacccactta attaaaagac atgttgggct tgaggcagca tcgaacgccg
     1561 ctcggcacgg ttcgctcaag ccttcaagcg gctgattcga aacggctatt ttcggcagag
     1621 cagttcgtag ccgctcggcc cttgagccca accggggcta ggccgcgacg tggctcttcg
     1681 cgtccttggt ggcggcgaga taccagtcga aaatctccgc gccgttccag tgcagcacgc
     1741 ccgaaaaacg gcgcgcatgg tcgtagatcg cttcgaggta tttgatccgg tgcggttggc
     1801 cgctgatgta gggatggatc gccagcgcca tgatcttggc gcggttcttt ccctcggcgt
     1861 aaaggcggtc gaattgatcg atggcacgcc gcgcgaggta ttcgctttcg tggtgctgga
     1921 tgatcatcat gccgatgtcg ttgatctcga cggtgtaggg gagcgtgacg agcggcccct
     1981 tggccgtgcg aatgaccgtc ggctcgtcgt catagaccca atcgccgatg tatttcacgc
     2041 cggcgctgac gaggagctcc ggtgtttcga atgtctgcgt caggcctggt cctagccacc
     2101 cgagcggccg cgtgccggtg aagcgctcga ggatgtccat cgagcggttg atcatcgccg
     2161 cctggtcttc caccttatgg atcggcattt ggtcgtaggc gtggcccata aattcccagc
     2221 gcaggcgctt ggcttcctcg gcgacgcggg cgtagtcctc gcaggtgcgc gcgttgatgg
     2281 cgagcgtcgg ccgcaatccg agccgctcgt aaagctcgaa gaagcgccac gccccgactc
     2341 gcatgccgta ttcgtgccag ctccagtgcg gcacatcggg aagcagcggc acccccgtcg
     2401 gcgcgggaag gacttgacgc ggcatcggcc tcccgatgtc ccacacttcg taattgacga
     2461 tggtccagaa cacgagccgc gcgtcgcccg gcaatttgag cggcggccgg tccacgatcg
     2521 cggaaaaatc gcagcgctcc cgcggcagca taggggtggt cgtcatggaa tgggcgctcc
     2581 tcctgcgttc tgcggcatga tagggctgcg cgccgcgatg atccacctcg cactcccgtc
     2641 gcattgcggt gcggcatcgt ggtgacgcgc ggccgcgcac atccggctat gctgcgcgag
     2701 atttaggaag gcgaaagcgg aaatggacct gagaaagggg ccgatggtgt ccacggccgg
     2761 agatcctagc tcgcgctggg ctcacgacgt cgcgcaggca acgcatag
//
LOCUS       DATCWM010000267         2869 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_315307, whole genome shotgun sequence.
ACCESSION   DATCWM010000267 DATCWM010000000
VERSION     DATCWM010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2869
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_315307"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(28..2166)
                     /locus_tag="VIQ50_05130"
     CDS             complement(28..2166)
                     /locus_tag="VIQ50_05130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018064725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indolepyruvate ferredoxin oxidoreductase subunit
                     alpha"
                     /protein_id="HEY9359794.1"
                     /translation="MERSFKKEVQALTLGEGETFRGEGILAVTKALLQSGVSYVGGYQ
                     GAPVSHLLDVLVDAEDIIGDLGVHLETCTNEASAAAMLGASINYPLRGAVTWKSIVGT
                     NVAADALSNLASPGVVGGVMIILGEDYGEGASVIQERSYAYAMKSSMWLIDPRPDLPT
                     IVRMVEQGFELSEESHAPVMMELRIRACHVTGEFKTKANRRAAFSGKNRLPGPPRFDY
                     GRLAHPPVIFSQERHKVEERLPAAQRFIRARKLNEVIAGDLAEIGIIALGGLTNGVLR
                     ALERLDLADLYGASRVPIYVLNVAFPLVPEELREFCAGKRAVLVVEEGSPDYVEQTVN
                     VELRRSDMTTRVLGKGALPRAGEYTSEVLLNGLACFIAETRPAGIDADAIAARAKSLL
                     ARKAQATAALGDIPARPPNFCTGCPERPVFSAIKLMQRELGPTHISADIGCHSFATFA
                     PFSLGNSILGYGMSLASAAAVTANMERRPIAVMGDGGFWHNGLVTGVASNLFNKGDGV
                     LIVMKNGYASATGQQYLPSSAASRLGAQTGTSIEQTLRSLGVKWLRTVRSYSVAKMTK
                     TLKAAMRTAERGLKVIIADGECQLARQRRVRAEEAEKLKRGARVVKVRFGVDEEICTG
                     DHSCIRLSGCPSLTVKPNPDPLRSDPVATVIDSCVGCGLCGEVAHAAVLCPSFYRAEV
                     IRNPNWWDRALHRGRQAIIGAFTGRREAPA"
     gene            complement(2257..>2869)
                     /locus_tag="VIQ50_05135"
     CDS             complement(2257..>2869)
                     /locus_tag="VIQ50_05135"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9359795.1"
                     /translation="LAATPMVLVVLGSSPYRTLNDLIAAARAKPGELAFASGGPGSSL
                     HIAIEVLKRAANLNIPYVPYGGTAPAINALMGNHVAAVWADYPTVVSQLQSGALRGLV
                     TTSHARIETLPDVPTLGETGVSKYEAEIFYGIVAPAKTPSDVLNRLSGWFSSALKAPD
                     MKPKLAQQGLFPVGMCGAEFGAYLRRQVEEYSRVIREADITVK"
BASE COUNT          462 a          947 c          981 g          479 t
ORIGIN      
        1 tgagaacgct gatgggacga gcaccgctca cgccggggcc tcgcggcggc ccgtgaacgc
       61 gccgatgatt gcttgccgcc cgcgatgcag cgcgcgatcc caccagttcg ggttgcggat
      121 cacttcggcg cgatagaacg agggacacag caccgcggcg tgggcgacct cgccgcacag
      181 cccgcagccg acgcagctat cgatcacggt tgccaccggg tcgctacgca gtggatcggg
      241 attgggtttg accgtcagcg acgggcagcc ggagagcctg atgcaggaat ggtcgcctgt
      301 gcagatctcc tcgtcgacac cgaaccggac tttgaccacc cgcgcaccgc gcttgagctt
      361 ctcggcctcc tcggcgcgca cgcggcgctg gcgggcgagc tggcactccc cgtcggcgat
      421 gatcaccttt aggccgcgct cggccgtgcg catcgccgct ttgagcgtct tcgtcatctt
      481 cgcgacgcta tagctgcgca ctgtgcgcag ccatttgacc ccgagcgaac gcagcgtctg
      541 ttcgatgctc gtgccggtct gggccccgag gcggctcgcg gcgcttgagg gtagatattg
      601 ctggccggtg gcggaggcgt agccgttttt catcacgatc aggacgccgt cgcctttgtt
      661 gaagaggttc gaggcaaccc cggtgacaag gccgttgtgc cagaacccgc cgtcgcccat
      721 caccgcgatc gggcgccgct ccatgttggc ggtgaccgcc gccgcgctgg cgagcgacat
      781 gccgtagccg aggatggaat tgccgaggct gaagggcgca aaggtcgcga acgaatggca
      841 gccgatgtcg gcgctgatgt gggtgggccc gagctcgcgc tgcatcagct tgatcgcgct
      901 gaacaccggc cgttccggac agccggtgca gaaattcggc ggccgggcgg gaatatcgcc
      961 gagtgcggcc gtcgcctgcg ccttgcgcgc gagcaggctc ttggcgcgcg ccgcgattgc
     1021 atcggcgtcg atgcccgcgg gcctcgtctc ggcgatgaag caggcaagcc cgttgagcag
     1081 cacctcggag gtgtattcgc ccgcgcgcgg cagcgcgccc ttgccgagca cacgcgtcgt
     1141 catgtcggaa cggcggagct ctacattgac cgtctgctcg acataatcgg gacttccctc
     1201 ctcgaccacg agcacggcgc gctttcccgc gcagaactcg cgcagctcct cgggcacgag
     1261 cggaaaggcg acgttgagca cgtagatcgg tacgcggctc gcgccgtaga gatcggcgag
     1321 atcgagccgc tcgagcgcgc gcagcacccc gttggtgagc ccgccgagcg cgatgatgcc
     1381 gatttcggca agatcgcccg cgatcacctc gttgagcttg cgcgcgcgga tgaaccgttg
     1441 cgcggcggga agccgctcct cgaccttgtg ccgctcctgc gaaaaaatga cgggcggatg
     1501 cgccagccgg ccgtaatcga agcgcggcgg accgggcagg cggttcttgc cggaaaacgc
     1561 ggcgcggcgg ttggctttgg tcttgaactc gccggtcacg tggcaggcgc ggatgcgcag
     1621 ctccatcatc accggcgcat ggctttcttc ggacagctcg aaaccttgct cgaccatgcg
     1681 cacgatcgtc ggcaaatctg ggcgcggatc gatgagccac atcgaggact tcatggcata
     1741 ggcgtaggag cgctcctgga tcacgctggc gccttcgccg taatcctcgc ccaggatgat
     1801 catcacgccg ccgaccacgc cgggggaggc gaggttcgac agcgcgtcgg ccgccacgtt
     1861 ggtgccgacg atcgatttcc aggtcactgc gccgcgcagc ggatagttga tggaggcgcc
     1921 gagcatggcc gcggccgaag cttcgttggt gcaggtttcg agatgcacgc cgagatcgcc
     1981 gatgatgtcc tcggcgtcga ccagaacgtc gagcaggtgc gacaccggcg cgccttgata
     2041 gccgccgaca tagctcacgc cggactgcag cagagccttg gtcaccgcga ggatgccctc
     2101 gccgcggaag gtctcgccct cgccgagcgt gagcgcctgc acctctttct tgaaggagcg
     2161 ttccatcgcc tccaccttgg cgcgagggag gctatatcgg cgccggcgcg aatgctacct
     2221 gcggaggcgc gggtctgccg cggccacccc gccgaactat ttgaccgtga tatccgcctc
     2281 gcgaatgacg cggctgtatt cctcgacctg ccggcgcagg taagcgccga attccgcgcc
     2341 gcacatcccg accggaaaga gtccctgctg ggcaagcttg ggtttcatgt cgggggcttt
     2401 cagcgcgctg ctgaaccagc cggataaccg gttgagcacg tcggacggcg tcttcgccgg
     2461 cgccacgata ccgtaaaaga tctccgcctc gtatttgctg acgccggtct cgcccagcgt
     2521 cggcacatcc ggcagcgtct cgatgcgcgc gtgcgaggtg gtcacgagcc cgcgcagcgc
     2581 gccggactgc agctgcgata ccaccgtggg atagtcggcc cagaccgcgg ccacgtgatt
     2641 gcccatgagt gcgttgatcg ccggcgcggt gccgccatag ggcacgtagg ggatgttgag
     2701 gttcgccgca cgcttgagca cctcgatggc gatgtgaagc gaggagccgg gtcccccgct
     2761 tgcgaacgcg agttcgccgg gcttggcgcg cgccgcggcg atcaagtcgt tcagcgtccg
     2821 gtagggcgac gagcccagca cgaccaggac catgggcgtc gccgcgaga
//
LOCUS       DATCWM010000268         3895 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_207353, whole genome shotgun sequence.
ACCESSION   DATCWM010000268 DATCWM010000000
VERSION     DATCWM010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3895)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3895)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3895
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_207353"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..852
                     /locus_tag="VIQ50_05140"
     CDS             <1..852
                     /locus_tag="VIQ50_05140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012042371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative sulfate exporter family transporter"
                     /protein_id="HEY9359796.1"
                     /translation="LRGVAAIIEAYLIYWAVVYFVARKWFGFNREWAAPLASGISICG
                     VSAAIATGGAIRARPIVPVLVSSLVVVFAVIEVLILPFLAQTFLWQEPLVAGAWIGLA
                     VKTDGAAVAGGGITESLILAKSAAEGVKYQPGWILGTTATVKVFIDIFIGIWAFVLGY
                     IWTNYINATSDKARIAEIWQRFPKFILGFVLTFLIGPYLALATPADVAAKVPAAIGEA
                     NTFRVIFFILTFFSIGVLSNFKKLWQEGIGKLAAVYVISLFGFVIWVGLLISWLFFAG
                     IKPPLAG"
     gene            872..1027
                     /locus_tag="VIQ50_05145"
     CDS             872..1027
                     /locus_tag="VIQ50_05145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011924935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359797.1"
                     /translation="MPQTDIGTELRRAAPEPLLPVEKKLIGFSLGTGLVLLLALALLN
                     YLLPATF"
     gene            1462..1986
                     /locus_tag="VIQ50_05150"
     CDS             1462..1986
                     /locus_tag="VIQ50_05150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359798.1"
                     /translation="MESSTEKMDTVFAELVNFFQTLRSGSLSAHLIFLALALVGLGLI
                     VAVAYQRFAIKRLQIASEAAQEEFRNIAADLRKRALEVKKQDEGLRRRDLAVEERDEL
                     KAFVKSADVELRCEPQRQVLKGSQRAMKGSVSHIITVGLKDIQTRMLQTDFKVITSAV
                     PDKADLLRRTEAAA"
     gene            complement(2023..2370)
                     /locus_tag="VIQ50_05155"
     CDS             complement(2023..2370)
                     /locus_tag="VIQ50_05155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5335 domain-containing protein"
                     /protein_id="HEY9359799.1"
                     /translation="MPTRKLDKKDWRSFLDRLSTTLEGKQAEIEVVSLQLGDQVEADW
                     LPLLGIAYDPNDDIVEVALEDLDHLIAKPRELYVEEGPGGLAALEIVDSDDVKQIIKL
                     RDPLMLPAPPQAR"
     gene            complement(2850..3551)
                     /locus_tag="VIQ50_05160"
     CDS             complement(2850..3551)
                     /locus_tag="VIQ50_05160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003498150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9359800.1"
                     /translation="MLAVEGVRSSYGRIEALHGVSLDVAAGEIVTLVGANGAGKTTLL
                     RAISGVQPISAGCIRFEERRLDGMSAHVRVALGIAQVPEGRQVFAPLSVEDNLRLGAW
                     TGRGERLEDELSSVYELFPTLGSRRRISAGTLSGGEQQMLAIGRALMAKPRLLLLDEP
                     SMGLAPMLVEQILDVVCRLKQGGLTVLLVEQNARAALAIADRGYVVEAGRIATSGSAG
                     ELLADDRVRAAYLGV"
     gene            complement(3538..>3895)
                     /locus_tag="VIQ50_05165"
     CDS             complement(3538..>3895)
                     /locus_tag="VIQ50_05165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY9359801.1"
                     /translation="AERPAGSLSFGDLKRLELARALASEPKLLLLDEPAAGCNAVETE
                     GIATVIRRLSRDGITVVLVEHDMRLVMNVSDRIHVLANGRTLAEGAADEVRTNPAVIA
                     AYLGIRGAQEAVGARG"
BASE COUNT          709 a         1266 c         1180 g          740 t
ORIGIN      
        1 ttgcgcggcg tcgccgcgat catcgaggct tatctcatct attgggcggt ggtgtatttc
       61 gtcgcgcgca agtggttcgg cttcaaccgc gaatgggcgg cgccgctggc gtcgggcatt
      121 tcgatttgcg gcgtttccgc cgcgatcgcc acgggcggcg ccattcgtgc gcggccgatt
      181 gtgccggtgc tggtttcctc gctcgtggtc gtgttcgccg tgatcgaagt cttgatcctg
      241 ccgttcctgg cgcagacgtt cctgtggcag gagccgctgg tcgccggcgc ctggatcgga
      301 cttgccgtca aaaccgacgg cgcggcggtc gccggcggcg gcatcaccga gtctttgatt
      361 ctcgcgaagt cggcggccga aggcgtgaaa tatcaacccg gctggattct cggcaccacc
      421 gccacggtga aagtgttcat cgacattttc atcggcatct gggcgttcgt gctcggctac
      481 atctggacca actatatcaa cgcgacctcg gacaaggcga gaatcgccga gatctggcag
      541 cgcttcccga aattcatcct cgggttcgtg ttgacgtttc tgatcggtcc ttacctcgcg
      601 ctcgcaaccc cggccgatgt cgctgcgaaa gttcccgccg caatcggcga ggccaacacc
      661 ttccgcgtga tcttcttcat actgacgttc ttctcgatcg gcgttctgtc caacttcaag
      721 aagctgtggc aggagggcat cggcaagctc gccgccgtct acgtcatcag cctgttcggc
      781 ttcgtgatct gggtcggctt gctgatttcc tggctgttct ttgccggcat caaaccgccg
      841 ctggccggct gacctccaag aaaggtaacc catgccgcaa accgatatcg gcaccgaact
      901 ccgacgggct gcgccggagc cgctgttgcc ggtcgagaag aagctcatcg gcttcagtct
      961 cggaaccggg ctcgttcttc tgctcgcgtt ggcgctactc aactatttgc tgcccgcgac
     1021 tttttgaggc tgatcgtcag ccctactttg ccttcgcgcc gacggcgagc ggagcggcgt
     1081 gcgtgatcac gctcgaccac ggccgtcagc ccgaccgatg cgaacgtaag ccgactgcgt
     1141 tccagatggc cagccaatgc acggcgctgc gacttagaac gtgaaacaac ccgcgccaag
     1201 gcaaatgcag acgcgcgaag cccgtgagat ttaggtcgat gtcgtggtct gagaccattt
     1261 gcgagtttga ccgccgcgaa ctcgcctacc cgtgcgttta acccctcgtt aaccctgccg
     1321 atgcaagatg gtcgacggcc taccctagtg cgaggcgcat gcccgcatgg cctagcggcc
     1381 gggcgggcgt ggtccacagc cagatcattg atgatgccgc gtacagtgcg gcgccatcag
     1441 ccgccctttc tgagggaatc attggagagt tcgaccgaga aaatggatac ggttttcgcc
     1501 gagctagtga actttttcca aaccctgaga agcggcagtc tatctgctca cttgatattt
     1561 ctggcgctgg ctctggtcgg tttggggctg atagttgcgg tagcgtacca acgcttcgca
     1621 attaaacggc tccagatcgc ctcggaagca gcacaggagg aatttcgaaa catagcggca
     1681 gacctcagaa aacgtgcatt ggaggtcaag aagcaggatg agggcctcag gagacgcgat
     1741 ctggcggtgg aggagcgcga tgaattgaag gcctttgtca aaagcgccga tgtcgaactc
     1801 agatgcgagc ctcaacgtca ggtgctgaaa ggatcacaac gggcgatgaa ggggagcgtc
     1861 agtcacatca tcacggttgg cctcaaggat attcaaaccc gtatgctcca aacggatttt
     1921 aaagtgataa cgtcagcagt tcctgacaaa gctgaccttc tacggagaac cgaagcggca
     1981 gcgtaaaaac tctgaatccg gtcactcacc ggtaaggagg gttcagcgcg cttgcggcgg
     2041 cgcaggcagc atcaacggat cgcgaagctt gatgatctgc ttgacgtcgt cactgtctac
     2101 gatttcgagc gccgccaggc cgccgggccc ctcctcgacg taaagctctc gcggcttggc
     2161 gatcagatga tccaggtcct cgagcgcgac ctccacgatg tcgtcattgg gatcgtaggc
     2221 gataccgagc agaggcagcc agtccgcttc gacctgatcg cccagctgca gcgagacgac
     2281 ctcgatttcc gcctgtttgc cttcgagcgt ggtcgagagg cgatcgagga aggaacgcca
     2341 gtctttcttg tcgagcttgc gggtcggcat gacaaatctc cgttgcgaca gcttgttgcg
     2401 acaacttatg agtcgaccgc gcgccggcgc gcgccgcggc ccggtcggag actaagtctc
     2461 gaaatcgtcc aagcttcggg gctttcgccg cggcgagccg attcgcgtca caatcgtcca
     2521 gctgggcgga tcgctcgccg gaaaggtctg ctccaggctc tcatcgagca tgctttccgt
     2581 gcacgtgacg gctgggactt ccggccggcg cttgcgccgc ccggtcgccg acccctgctg
     2641 tgcagtggac cgaggtgtca tgtcccggca gcgctccttc tgcccacgac cgaagcaccg
     2701 agctgcgccg cgcgcatgat acacctcctt cccctttcgg ccaccggccg caatggcaaa
     2761 cccgcccgcg cgagatagtt ccccccgtcc ctatttgcca cggccaagga gtcattccgc
     2821 gccgcttcga ccggcacccc gtgctgacgt catactccga gatacgcggc ccgcacgcgg
     2881 tcatcggcca gcaactcgcc ggcgctgccg ctcgttgcga tccgccccgc ctcaaccaca
     2941 tagccgcggt cggcgatggc cagcgccgcg cgggcattct gctcgaccag cagcaccgtc
     3001 aggcctccct gcttgaggcg gcacacgaca tcgagaatct gctcgaccag catgggagca
     3061 agccccatcg agggctcgtc cagcagcaat agccgcggtt tcgccatcaa ggcgcggccg
     3121 atcgccaaca tctgctgctc accgccggat agcgtgccgg cactgatccg gcggcgcgac
     3181 cccagcgtcg gaaacagctc gtaaacgctg gaaagttcgt cctcgagacg ctcgccccgg
     3241 cccgtccacg cgccaagcct gagattatcc tcgaccgaaa gcggcgcgaa cacctggcgg
     3301 ccctccggca cctgcgcgat cccgagtgca acccgcacat gggcggacat tccgtccagg
     3361 cggcgctctt cgaaacggat gcaaccggcg gagatcggct gcacgccgga gatggcccgc
     3421 agcaaggtgg tcttgccggc gccgttggcg ccgacgagcg tgacgatctc gcctgcggcg
     3481 acatcgagcg aaacgccgtg caacgcctcg atgcggccgt agctgcttct gaccccctca
     3541 accgcgagca ccgaccgcct cctgcgcgcc gcggatgccg agataagccg caatcaccgc
     3601 cgggttcgtg cgcacctcgt cggccgcgcc ctcggcaagc gtgcggccgt tggcaagcac
     3661 atgaatgcga tctgagacgt tcatgaccag gcgcatgtca tgctcgacca gcacgacggt
     3721 gatgccgtcg cggctcaagc ggcggatgac ggtcgcaatg ccttcggttt ccaccgcatt
     3781 gcagcccgca gcgggctcgt caagcagaag gagcttgggc tcgctcgcca gtgcacgggc
     3841 caattcgagg cgcttgagat cgccgaacga caggctcccc gccggccgct ccgcc
//
LOCUS       DATCWM010000269         3858 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_93860, whole genome shotgun sequence.
ACCESSION   DATCWM010000269 DATCWM010000000
VERSION     DATCWM010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3858
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93860"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..213)
                     /locus_tag="VIQ50_05170"
     CDS             complement(<1..213)
                     /locus_tag="VIQ50_05170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007609711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0032981 - mitochondrial respiratory chain
                     complex I assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-ubiquinone oxidoreductase subunit NDUFA12
                     family protein"
                     /protein_id="HEY9359802.1"
                     /translation="MKTFFLRFFTWWNGATFGTLLWTALYGEPVGEDEFGNRYYRTKG
                     GKIDPSLGFERRWVIYNGTAEASIVPP"
     gene            1074..>3858
                     /locus_tag="VIQ50_05175"
     CDS             1074..>3858
                     /locus_tag="VIQ50_05175"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12-dependent ribonucleotide reductase"
                     /protein_id="HEY9359803.1"
                     /translation="MRIERRYTKEGQSPYADIAFRLTESEIRNPDGSVVFHAENVEVP
                     SVWSQVAADVLAQKYFRKAGVPTRLKKVEEESVPSWLWRSTADETELAALAEKERTTG
                     EHSAKQVFERLAGTWTYWGWKGGYFDSEADAHAFFDELVYMLAMQMAAPNSPQWFNTG
                     LYWAYGIDGPSQGHFYVDFATGKLTKSKSAYEHPQPHACFIQSIADDLVNEGGIMDLW
                     VREARLFKYGSGTGSNFSRLRGEGERLAGGGKSSGLMSFLKIGDRAAGAIKSGGTTRR
                     AAKMVIVDADHPDIEQFIDWKVIEEQKVASLVTGSKVNQKHLRAILKACVNCEGSGDD
                     CFDPDKNPVLRREIKAARRNHVPDNFIKRVIQFAKQGYTDIEFPVYDTDWDSDAYLTV
                     SGQNSNNSVRITDEFLKAVEADGDWDLFWRTKPGKIAKTIKARALWEKIGYAAWACAD
                     PGLQYHTTVNDWHTCPASGPIRASNPCSEYMFLDDTACNLASLNLLAFRDAATQQFDL
                     EGYEHAVRLWTIVLEISVLMAQFPSREIAQLSFDFRTLGLGYANLGGLLMSSGLSYDS
                     DAGRQIAGALTAIMTGVSYATSAEMAGLLGAFPGYKKNREHMLRIIRNHRRAAHGERT
                     GYEKVATPPVPLDHKGCPDPRMIERAEHAWDRALALGEQHGYRNAQVSVIAPTGTIGL
                     VMDCDTTGIEPDFALVKFKKLAGGGYFKIINRAVPEALRVLGYSEAQIAEIEAYAVGH
                     GSLGQAPGINHTTLKQKGFTEEAIEKVEKAVRSAFDIKFAFNKWTLGEEFVAKLGIAP
                     EKLADPRFDLLSALGFTKREIEAANVHVCGAMTVEGAPHLKAEHYPVFDCANPCGRNG
                     KRYLSVESHIRMMAAAQPFITGAISKTINMPNDATVEDCKEAYLLSWKLALKANALYR
                     DGSKLSQPLQSQLI"
BASE COUNT          766 a         1233 c         1210 g          649 t
ORIGIN      
        1 gggcggcacg atcgaagcct cggcggtgcc gttgtaaatc acccagcggc gctcgaagcc
       61 gagcgacgga tcgatcttgc cgcccttcgt acggtaatag cgattgccga attcgtcctc
      121 gcccaccggc tcgccataga gtgccgtcca caacagcgtg ccaaaggtgg cgccgttcca
      181 ccacgtgaag aagcgcagga aaaacgtttt catctcttgt gccgtagata agccgggcgg
      241 cgcgttcatg ccaccgctgc ctgatgaagt ccacctgcag ccaacggcaa gggaacaagt
      301 ctctctcgct ctcttaagcc cgttgtctcc cgtattttcc tgtttttttg aaaacacagg
      361 ccgcacgcgg tcacaggcgc ggtcgcttgt gtcgcgtggc ggacgaatca aacgcgactc
      421 gggcggttcc gatcccctct gccgaaggga gcgcggggcg agcccaaatc gcccgcaaat
      481 gcgagaaacg cgcattcggc ggacccatgt actgaattca ggggtcgaaa aagcgggacg
      541 cgaacgcgga cggtttcgcc cccgcctttg gtccgcggga tgccgcgccg gcgataattt
      601 ctcgcttgac aaagattgcg tgacaggagg gtgaccggac tgtgaacgaa agccttccaa
      661 atccgccccc gatatccgac acttgccgca ctgcacctga gtcgcccccg aatttcacag
      721 gcggaacacc acatttagca gtttgtttac ggggcgctac taagccttga cgaataaggg
      781 gtgctgtctt agcttcaaaa agttcggcgc gagtggttcg aagtcccgcc gggcgctctc
      841 ctgaacgggg tttgcgtaac cgctccgctg ccgcaacggc gccggagaat ggctcttcgt
      901 tgccttgaac gggcgagagc ggcttaagcc gcccacaagc ccggcccgcc gggaagaggc
      961 gttaaaacag ggaacgcgta tgagccagtc ggggcgcggc cataggccag gagtcgcgcc
     1021 atgggtcagt gtcggcggtc cgccgggctg ccgcgccaac gaaggggcga acgatgcgga
     1081 ttgagcggcg atacaccaag gaaggacagt ccccctacgc ggacatcgcc ttccggctga
     1141 ccgaaagcga gatccgcaat cccgacgggt cggttgtgtt ccatgccgag aacgtcgagg
     1201 tgccgagcgt ctggtcgcaa gtcgccgccg acgtgctggc gcaaaaatac ttccgcaagg
     1261 cgggagtacc gacacggctg aagaaggtcg aggaggagag cgttccttcc tggctgtggc
     1321 gctcgaccgc cgacgagacg gagttggcgg cgctagcgga gaaggagcgc acgaccggcg
     1381 aacattccgc caaacaggtc ttcgagcgcc ttgccggcac ctggacttac tggggttgga
     1441 agggcggcta tttcgattcg gaggcagacg cgcacgcctt cttcgacgag cttgtctaca
     1501 tgctcgcgat gcaaatggca gcgccgaact cgccgcaatg gttcaatacc gggctctatt
     1561 gggcgtacgg catcgacgga cccagccagg ggcatttcta cgtcgacttt gcgaccggca
     1621 agctcaccaa atcgaagtcg gcctacgaac atccgcaacc gcacgcctgc ttcatccagt
     1681 cgatcgccga cgatctcgtc aacgaaggcg ggatcatgga cctatgggtg cgggaggcgc
     1741 gtctgttcaa atacggttcg gggaccggtt cgaacttctc gcgcttgcgc ggggaaggcg
     1801 aacggctggc gggtggaggg aaatcgtccg gcctgatgag cttcctcaag atcggcgatc
     1861 gcgccgccgg cgccatcaag tcgggcggca ccacgcgccg cgccgccaaa atggttatcg
     1921 tcgacgccga ccatcccgat atcgagcaat tcatcgactg gaaggtgatc gaggagcaga
     1981 aagtcgcttc cctcgtcacc ggctcaaagg tcaaccaaaa gcacctgcgc gcgatcctca
     2041 aggcgtgcgt gaactgcgag ggctcgggcg acgattgctt tgacccggac aagaacccgg
     2101 tgctgcggcg cgagatcaag gccgcgcgca gaaatcacgt gcccgacaat ttcatcaagc
     2161 gcgtgatcca gttcgccaag cagggctata ccgacatcga gttcccggtc tacgacacgg
     2221 actgggattc ggacgcttat ctcaccgtct cgggacagaa ttccaacaat tcggtgcgca
     2281 tcaccgacga gttcctcaaa gcggtcgagg ccgacggcga ttgggatctg ttctggcgca
     2341 ccaaaccggg caagatcgcc aaaaccatca aggcgcgcgc gctgtgggag aagatcggct
     2401 acgccgcctg ggcctgcgcc gatcccggct tgcagtatca caccacggtc aatgactggc
     2461 acacctgtcc ggcctcgggg ccgatccgcg ccagcaatcc gtgctcggaa tacatgttcc
     2521 tcgacgacac cgcgtgcaat ctcgcctcgc tgaacctgct cgcgttccgc gacgcggcga
     2581 cgcagcagtt cgacctcgag ggctacgagc acgcggtgcg gctgtggacc atcgtgctgg
     2641 aaatttcggt gctgatggca caattcccct cgcgcgagat cgcgcagctc tccttcgact
     2701 tccgcacgtt gggactgggc tatgccaatc tcggcgggct gttgatgtcc tcgggcctct
     2761 cctacgactc cgatgccgga cgccagatcg cgggcgcgct gaccgcgatc atgaccggag
     2821 tgagctatgc gacctcggcg gagatggcgg ggctgctcgg cgccttcccc ggctacaaga
     2881 agaaccgcga gcatatgctg cgcatcattc gcaaccatcg ccgcgccgcg cacggcgagc
     2941 gcaccggcta tgagaaggtg gcgacgccgc cggtcccgct cgaccacaag gggtgccccg
     3001 atccacgcat gatcgagcgt gccgagcacg cctgggaccg cgcgctggcg ctgggcgagc
     3061 agcacggcta tcgcaacgcc caggtttcgg tgatcgcccc gaccggcacg atcggcttgg
     3121 tgatggactg cgacaccacc ggcatcgagc ccgacttcgc gctggtgaaa ttcaagaagc
     3181 tcgccggcgg cggctatttc aagatcatca accgcgcggt gcccgaggcg ctgcgcgtgc
     3241 tcggctattc cgaggcgcag atcgccgaga tcgaggccta tgcggtcggc cacggcagcc
     3301 tagggcaggc gcccggcatc aaccacacca cgctcaaaca gaaggggttc accgaggagg
     3361 cgatcgagaa agtggagaag gcggtgcgca gcgccttcga catcaaattc gccttcaaca
     3421 agtggacgct gggcgaagag ttcgtggcca agctcggcat cgcgccggag aagctcgccg
     3481 atccgcgctt cgaccttctc tccgcgctcg gcttcaccaa gcgcgagatc gaggccgcca
     3541 acgtgcatgt ctgcggcgcg atgacggtcg agggcgcgcc gcatctcaag gccgagcact
     3601 atccggtgtt cgactgcgcc aatccgtgcg ggcgcaatgg caagcgctac ctctcggtcg
     3661 agagccacat ccgcatgatg gccgcggcgc agccgttcat caccggcgcc atctccaaga
     3721 ccatcaacat gccgaacgac gccacggtcg aggactgcaa ggaggcctat ctcctctcct
     3781 ggaagctcgc gctgaaggcc aacgcgctct accgcgacgg ctcgaagctc tcgcagccgc
     3841 tgcagagcca gctcatcg
//
LOCUS       DATCWM010000270         4304 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_142666, whole genome shotgun sequence.
ACCESSION   DATCWM010000270 DATCWM010000000
VERSION     DATCWM010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4304)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4304)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4304
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142666"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2345
                     /locus_tag="VIQ50_05180"
     CDS             <1..2345
                     /locus_tag="VIQ50_05180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008136510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ligase-associated DNA damage response DEXH box
                     helicase"
                     /protein_id="HEY9359804.1"
                     /translation="SSAEPAPPKSRQLVSTGRGIRRQGGLHTLYISPLKALAVDVARN
                     LEKPVAEMGLPIRIETRSGDTPASKRQRQRRDPPDILLTTPEQLALVLSSPDAPYLFE
                     SLKRVVLDELHALVTSKRGDLLSLGLARLFALAPDLTSVGLSATVADPDDLRRFLVPQ
                     RPGMALADLVVARGGAAPDVGMLDTAERLPWAGHSAHHALDEIYRLIRSHKTALVFVN
                     TRSQAESVFQELWRLNEDALAIALHHGSLDVAQRRKVEAAMAQGKLRAVVATSSLDLG
                     VDWGDIDLVVNIGAPKGASRLLQRIGRANHRMDEPSKGVLVPANRFEVLECAAALAAI
                     ADDAQDTPSARIGALDVLAQHLLGSACAKPFLNHELYAEVRSAAPYAGLARADFDAVL
                     DFVATGGYALKAYERFAKIRQGQDGRWRVAHPMIAQRYRMNVGTIVEADMLKVRLVRS
                     RASKMIPRGGRILGAVEEHFIETLVSGDTFVFAGEILRYEALVEDEVYVSRAAAEEPK
                     VPSYEGGKFPLSTYLADRVRKIVSDRDEWRSLPDQVRGWLQIQERRSLIPRPRQLLVE
                     TFPRADKHYLICYPFEGRLAHQTLGMLLTRRLERARLRPLGFVANEYALAVWGLGDIA
                     QEVGRGGLSLATLFDEDMLGDDLEAWLAESSLMKRTFRTCAIIAGLIERRFPGKEKSR
                     REVTISTDLVYDVLRRHQPDHILLRAARADAASGLLDIRRLGDMLSRIRGRIIHRPLE
                     RVSPLALPVMLEIGRESVYGEASEVLLAEAEAQLVKEAME"
     gene            2342..3079
                     /gene="pdeM"
                     /locus_tag="VIQ50_05185"
     CDS             2342..3079
                     /gene="pdeM"
                     /locus_tag="VIQ50_05185"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response
                     endonuclease PdeM"
                     /protein_id="HEY9359805.1"
                     /translation="MTGASTQRAAATGHDEPRGGKRRAEVIIAGVALVLDCDGALYWP
                     DAGLLAISDLHLEKGSSFAARGVLLPPYDTARTLARLAVVIARYAPQAVIALGDSFHD
                     EDGAARMAAADRDALRALQRGRDWMWIAGNHDPEPAIGVGGRFGAVLAVGALSFRHEP
                     GGAAGEIAGHLHPVARVSRRRCSVTRRCFASDGMRLLMPAFGAFAGGLNVGGRAFADV
                     FGTFAFMAYVLGEGRIYALPAARCLGG"
     gene            complement(3183..3968)
                     /locus_tag="VIQ50_05190"
     CDS             complement(3183..3968)
                     /locus_tag="VIQ50_05190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006615251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02186 family protein"
                     /protein_id="HEY9359806.1"
                     /translation="MTRVSLAALAAVFSALIASAAPAAAERLVASLSNHRVMITSNFV
                     GEELVLFGGIEQDAASRPRRADYDIIVTVTGPRQTMMTFRKERILGLWVNADSRVLEN
                     APAYLAVLSNRPLDAVTNTETLRRLQLGLDNIPLLQRASVNIADAASDDPFRVAFIKI
                     KTEQGLYSEVSNGVTFLAPALFRASIALPAEVPVGTYEVDVRLFADGVQIARTPAPFE
                     VYKSGFEQVVTAAAREHGVLYGLATAMMAIATGWFASVVFRRD"
     gene            complement(3965..>4304)
                     /locus_tag="VIQ50_05195"
     CDS             complement(3965..>4304)
                     /locus_tag="VIQ50_05195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEY9359807.1"
                     /translation="GFLLVPMLIYVLRVPTATVIGTSMVLTLVTMASATVMHAAVNHL
                     VDALLAVFLMVGGVIGAQFGARAGQKMSGERLRLLLGLLVLAVGIRFAVNLVVPPETL
                     YSVRVMDGDI"
BASE COUNT          737 a         1390 c         1410 g          767 t
ORIGIN      
        1 catcctcggc cgagccggca ccgccgaagt cgcgccagct tgtctccacc ggtcgaggta
       61 tccggcgcca aggcgggctg cacaccctct acatctctcc gctgaaggcg ctcgccgtcg
      121 acgtcgcgcg caacctggag aagccggtcg ccgaaatggg attgccaatc cgaatcgaga
      181 cgcgcagcgg tgatacgcca gcctcgaagc gccagcggca acgccgcgat ccgccggaca
      241 tcctgctcac cacgcccgag cagctcgccc tggtcttatc ctccccggac gcgccttatc
      301 tcttcgagtc gctcaagcgg gtggtactcg acgagctgca tgcgttggtg acgtcgaaac
      361 gtggcgacct gctgtcgctc ggcctggcgc ggttgttcgc gctcgcgccc gacctcacga
      421 gcgtcggact gtccgcgacc gtggccgatc ccgacgatct gcgccgcttt ctcgtgccgc
      481 aacgtcccgg gatggccctg gccgatctcg tcgtcgcgcg aggcggcgcc gcgcctgatg
      541 tcggcatgct ggataccgcc gagcgactgc cttgggccgg tcattccgcc catcatgcgc
      601 tcgacgagat ctatcggttg atcaggagtc acaaaaccgc actcgtcttc gtcaatacgc
      661 gcagccaggc cgaaagtgtg ttccaggagc tatggcgcct caatgaggat gcgcttgcga
      721 tcgcgctcca tcacggctcg cttgacgtgg cgcaacgccg caaggtcgag gcggcgatgg
      781 cgcaaggcaa gctgcgcgcg gtcgtggcga cgtcgtccct cgatctcggc gtcgactggg
      841 gcgatatcga tctcgtcgtc aacatcggtg cgcccaaggg cgcttcgcgt cttctccagc
      901 gcatcggtcg cgccaaccac cgcatggacg agccctcgaa aggcgtattg gttccggcca
      961 accgcttcga agtgcttgaa tgcgccgcgg cgctcgcggc catagccgat gacgcgcagg
     1021 acactccgtc ggcccgcatc ggcgcgctcg atgtgctcgc acagcatctg ctgggttccg
     1081 cctgtgccaa gccgttcctc aaccacgagc tatatgccga ggtgagaagc gccgcgccct
     1141 atgcggggct tgcgcgcgcc gacttcgacg ccgttctcga tttcgtcgcc accggcggct
     1201 atgcgctcaa agcctacgag cgcttcgcca agatcagaca aggccaggat ggccgctggc
     1261 gcgtggccca tcccatgatt gcgcaacgct atcgcatgaa tgtcggcacc atcgtcgagg
     1321 ccgatatgct caaggtgagg ctcgtgcgct cgcgtgcctc gaagatgatt ccgcgcggcg
     1381 ggcggatttt gggggcggtc gaggaacatt tcatcgagac gctggtgtcc ggtgatacct
     1441 tcgttttcgc cggcgagatc ctcagatacg aggcgctggt cgaagacgag gtctatgttt
     1501 cgcgcgccgc tgcggaggag cccaaggtgc catcctacga gggtggaaaa tttccccttt
     1561 cgacttatct cgccgaccgc gtacgaaaga tcgtctctga tcgggacgaa tggcgatcgc
     1621 tgccggatca ggtccggggt tggttgcaga tccaggaacg acgatcgctc attccgcggc
     1681 cgcgccaact attggtcgag actttcccgc gcgccgacaa gcattatctc atctgctatc
     1741 cgttcgaggg acggctggcg caccaaacgc tgggcatgct gctcacgcgc cggctcgagc
     1801 gggcccgact tcgtccgctc ggcttcgtgg cgaatgagta tgcacttgcg gtctggggtc
     1861 tgggagatat cgcacaggaa gtcggccgcg gcgggttatc gctggcgaca ttgttcgacg
     1921 aagatatgct cggcgatgat ctcgaagcct ggcttgccga atcttcgctt atgaagcgca
     1981 ccttccgaac ctgcgcgatc atcgccggcc tgatcgaacg ccgcttcccc ggtaaggaga
     2041 agtcgcgccg tgaagtgacg atctcgaccg acctcgtcta cgacgtgctg cgtcgacatc
     2101 aacccgatca catcctcttg cgcgccgccc gcgccgacgc cgcgagcggt ctactcgaca
     2161 ttcgtcgcct cggcgatatg ctctcgcgca ttcgcggccg aatcatccat cgtccgctcg
     2221 agcgcgtctc gccgctcgcg ctgccggtga tgctcgaaat cggccgcgaa tcggtttacg
     2281 gcgaagcatc cgaagtgctg ttggcggaag ccgaggcgca gctcgtgaaa gaggcgatgg
     2341 agtgacagga gcgagcacgc aacgagcggc ggcgacaggc cacgacgagc cccgcggcgg
     2401 aaagcgccgg gcagaggtga tcatcgcggg ggtggcgctg gtgctcgatt gtgacggcgc
     2461 gctctattgg cccgatgccg ggctgctcgc gatctccgat ctgcatctgg agaagggttc
     2521 gagcttcgcc gcgcgcggcg tgctgttgcc cccctatgac accgccagga cgctggcgcg
     2581 gcttgccgtc gtcattgctc gctacgcgcc acaggcggtg atcgcgctgg gcgacagctt
     2641 tcacgacgag gacggcgccg ctcgcatggc ggcggccgac cgcgatgcgc tgcgcgcgct
     2701 ccagcgcggc cgcgattgga tgtggatcgc cggcaaccac gatccagaac cggcgatcgg
     2761 agtgggcggc aggttcggcg ccgtgcttgc cgtcggcgcg ctgagcttcc gccacgagcc
     2821 tggcggcgcc gcgggcgaga tcgcggggca cctgcacccg gttgcgcggg tgagccggcg
     2881 gcgttgcagc gtcactcgac gctgcttcgc gagcgacggc atgcgcttgc tcatgccggc
     2941 gtttggcgcc ttcgccggcg gcttgaacgt cggtggccgt gccttcgctg atgtcttcgg
     3001 caccttcgct tttatggcat acgtgctcgg cgagggacgg atctatgctc tccccgcagc
     3061 acgatgtctc ggcggttgag tcctcacgtc ctcggtgtcg cacctcgacg gcagcgtctc
     3121 gagccgggct cgccacgatc agggcgctga ggtcgtgaga tgggccgctt gcgtgatgtg
     3181 cattagtccc gccggaagac gacggatgcg aaccagccgg tggcgattgc catcatcgcg
     3241 gtagccagtc cgtagagcac gccgtgttcg cgcgcggcgg cggtgacaac ctgctcgaac
     3301 ccggatttgt agacctcgaa cggagcaggc gtgcgtgcga tctgcacgcc gtcggcgaac
     3361 agccggacgt cgacctcata agtaccaacc ggcacctcgg ccggtaacgc tatcgaggcg
     3421 cggaacaaag ccggcgcgag gaacgtcact ccgttcgaaa cttcgctgta gagtccctgc
     3481 tcggtcttga tcttgatgaa ggcgacgcgg aagggatcat cgcttgcggc atcggcgata
     3541 ttgacgctag cgcgctgcag caatgggatg ttgtcgaggc cgagctgcag gcggcgcagc
     3601 gtttcggtat ttgtgacggc gtcgagggga cggtttgaga gcacggcgag ataggccgga
     3661 gcattctcca gtacgcgcga atcggcgttc acccacaggc caagtatccg ctccttgcgg
     3721 aaggtcatca tggtttgccg cggcccggtg acggtgacga tgatgtcata gtcggcgcgc
     3781 cgtgggcgtg acgctgcatc ctgctcgatt ccgccgaaca gcacgagttc ctcgccgacg
     3841 aaattcgagg ttatcatcac gcgatgattg gaaagcgagg caaccagccg ctccgccgcg
     3901 gcaggggcag ccgatgcgat gagcgcactg aaaacggccg cgagagcagc taaagaaacg
     3961 cgtgtcatat gtcgccgtcc atcacgcgga cggaatagag ggtctcgggc ggcacgacta
     4021 gattgaccgc aaaacgaatc ccaaccgcga gcacgagcag accgagcagg aggcgcagcc
     4081 gctcgccgct catcttctgt ccggcacgtg cgccgaactg cgccccgatc actccgccaa
     4141 ccatcagaaa cacagccagc agcgcatcga caagatggtt gacggccgcg tgcatgaccg
     4201 tggcggaagc catggtcacc agtgtgagga ccatcgacgt accgatgacc gtcgcggtgg
     4261 gtacccgcag cacgtagatg agcatcggca ccagcaggaa gccg
//
LOCUS       DATCWM010000271         5029 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_83304, whole genome shotgun sequence.
ACCESSION   DATCWM010000271 DATCWM010000000
VERSION     DATCWM010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5029
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83304"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            111..929
                     /gene="tatC"
                     /locus_tag="VIQ50_05200"
     CDS             111..929
                     /gene="tatC"
                     /locus_tag="VIQ50_05200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HEY9359808.1"
                     /translation="MSREDEEKEIEATKAPLMEHLIELRTRLIKALIAFAIAFVGCFF
                     FAKTIYNVLTWPFVWVAGPENSKFIYTGLLEYFVVQLKLAMFGAAFISFPVVATQVYM
                     FVAPGLYRQEKQAFLPYLIATPIFFLLGALVVYILVWPMLARFSLNMQQMGGDGQATI
                     ELLPKVEDYLTLMMKLIFAFGIAFQLPVILTLLGRVGIITSDQLKEKRRYFIVGAFVI
                     AAVLTPPDVLSQLSLAVPLMALYEGSIWSVRWVEKKAAAEKAKDAASAAAKPAE"
     gene            1105..2577
                     /gene="serS"
                     /locus_tag="VIQ50_05205"
     CDS             1105..2577
                     /gene="serS"
                     /locus_tag="VIQ50_05205"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009799723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HEY9359809.1"
                     /translation="MHDIKWIREHKEEFDRGLKRRGLPGEADKLLAIDERRRAAIQKA
                     EAALARRNAASREIGAAKKSNEEAAQALMAEVARLKEEIPALEAQEKQLSKELDDTLA
                     QIPNLASPDVPDGKDASDNIEHHRFGAKRTYGFTPQHHFDLGEALGQMDFETAAKLSG
                     ARFVVLKSGLARLERALGQFMLDLHTTEHGYTEVAPPLLVRSEVMYGTAQLPKFKDDQ
                     FSTSRSSNQADELFDNMIKEGFKLAAAEVRALIGERKPAGEVMKQFDESFVQQIPEWR
                     KRFDSELAEQLKLWLIPTAEVPLTNLARETILEEDALPLRFTACTPCFRAEAGAAGKD
                     TRGMIRQHQFDKVELVSITTPEQSRDEHERMLACAEEVLRRLDLHYRVVMLCTGDMGF
                     AAQKTYDIEVWLPGQNMFREISSCSLCGEFQARRMDARYRPKGARQVRYVHTLNGSGV
                     AVGRALIAVMETYQQQGGSIAVPEVLQRYMGGLKTIERAG"
     gene            2661..3425
                     /gene="surE"
                     /locus_tag="VIQ50_05210"
     CDS             2661..3425
                     /gene="surE"
                     /locus_tag="VIQ50_05210"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012169750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HEY9359810.1"
                     /translation="MRILITNDDGIHSEGLEVCAEIGRALSDDVWVIAPEFDQSGVSH
                     SLSLNDPLRLREIGERRFAVKGTPTDCVIMGARHVIKARPPNLVLAGVNRGRNAGEDV
                     IYSGTVAGAVEGTILGIPSLALSQAYRSRSGEPPHWETAVRFGPDIIRRVLAAGIPRD
                     VLVNINFPDCAPADVKGVAVTSQGRNRQERLQIDQRQDGRGNAYYWIAYVRMRAQPPH
                     DGSDISALSDNRIAVTPLRLDMTDEPFMTRLAQLFD"
     gene            complement(3451..3843)
                     /locus_tag="VIQ50_05215"
     CDS             complement(3451..3843)
                     /locus_tag="VIQ50_05215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY9359811.1"
                     /translation="MTAAIQVAPAPPSKRVLVVEDELMIRMLLEDMLSELGYTVAAQA
                     GRIDEALHAAKTADFDLAILDLNLEGEPVLAVAEALVARGTPFVFATGYGERGLPEAY
                     RNRPTLKKPFQLEGLKQMLQSALDGGTN"
     gene            4094..4714
                     /locus_tag="VIQ50_05220"
     CDS             4094..4714
                     /locus_tag="VIQ50_05220"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018458023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HEY9359812.1"
                     /translation="MQFLLGLRRRGISDPAVLRAMDEVPREHFVESSFMDKAYADQAL
                     PIACGQTISQPYVVAFMTEQLDVQPSHRVLEVGTGSGYQAAILSRLAREVVSVERYRT
                     LAEAARRRLSALGYDNVELLVGDGLAGVPERAPYDRIIVTAAAEIIPDALVGELADNG
                     AMVLPLGPHAGPQQLVKLTKGEQGLKQEDLIGVRFVPLLPGKAREL"
BASE COUNT          914 a         1563 c         1635 g          917 t
ORIGIN      
        1 ggcggcgagg cgggggtcgc gccggtcggc gatgtcgccg cgccgtccgc ggcggaggcc
       61 gagccggcgg ccgccggctc tgatccagtc aggtccgatg gtaagcccgc atgagccgcg
      121 aggacgagga aaaggagatc gaggcgacca aagcgccgct gatggagcac ttgatcgagt
      181 tgcgcacgcg gctgatcaag gcgctgatcg cgttcgcgat cgcttttgtc ggctgcttct
      241 tcttcgccaa gacgatctac aacgtgctga cctggccgtt cgtttgggtc gcggggccgg
      301 agaactcgaa gttcatttat accggcctgc tggaatattt cgtcgtccag ctcaagcttg
      361 cgatgttcgg cgccgcgttc atctcgttcc cggtcgtggc cacgcaggtc tacatgttcg
      421 tcgcgcccgg cctctatcgt caagagaagc aggcgttcct gccttacctc atcgcgacgc
      481 caatcttctt tctgctcggc gccctcgtgg tctacatttt ggtgtggccg atgctggcac
      541 gcttttcctt gaacatgcag cagatgggcg gcgatgggca ggccacgatc gagcttctac
      601 cgaaggtcga ggattatctg accttgatga tgaagctcat cttcgccttc ggcatcgcct
      661 tccagctgcc ggtcatcctg acgctgttgg ggcgcgtcgg catcatcacc tccgatcagc
      721 tcaaggagaa gcggcgctac ttcatcgtcg gcgcgttcgt gatcgcggcg gtgctcactc
      781 cgcccgacgt gctgagccag ctctcgctcg ccgtgccgct gatggcgctc tacgaaggct
      841 cgatctggtc ggtgcgatgg gtcgagaaga aggcggccgc ggagaaggcc aaggacgccg
      901 ccagcgccgc cgcgaagccc gcggaatgac catcggctat catcggggcg ggaatacata
      961 ttgattcgtc gtgctcggca cgcagtctag ccgcgcagac tgcgtaacta gtctgcattg
     1021 ccgagcatcc acgtctagat tgtgtagcgg caaagacgtg gatggccggg acgcgcccgg
     1081 cgatcacgtc cggagcgggt tggcatgcac gatatcaagt ggattcgtga gcataaggaa
     1141 gaatttgacc gcggattgaa acggcgcgga ctgccgggcg aggcggacaa gctgcttgct
     1201 atcgacgaac gccggcgcgc tgcgatccag aaggcggagg ccgcgctcgc tcgccgcaat
     1261 gcggcgtcgc gggagatcgg cgcggcgaag aagagcaatg aggaggcggc gcaggcgctc
     1321 atggccgagg tcgcgcggct gaaagaagaa atcccggcgc tcgaggcgca ggagaagcaa
     1381 ctctcaaagg aactcgacga cacgcttgcg cagattccca acctggcatc gcccgacgtg
     1441 cccgacggca aggacgcgag cgataacatc gagcaccacc gtttcggcgc caagcgcacc
     1501 tacggtttca cgccgcagca tcatttcgat cttggtgaag ccctcgggca gatggacttc
     1561 gagaccgccg cgaagttgtc aggtgcgcgt ttcgtcgtgc tcaagagcgg gctcgcccgg
     1621 ctcgagcgcg cgctcgggca attcatgctc gacttgcaca cgaccgagca cggctacacc
     1681 gaagtcgcac cgccgctgct ggtgcgcagt gaggtgatgt atggaacggc acaactgccg
     1741 aagttcaaag atgatcaatt ctctacatca agaagctcca atcaagcgga tgaactcttc
     1801 gacaacatga tcaaggaggg attcaagctt gctgcggcgg aagtgagggc tttgatagga
     1861 gaacgcaagc ctgccgggga agttatgaag caattcgacg aaagtttcgt acagcagata
     1921 cctgaatggc ggaaacggtt cgatagtgag ctagcggaac agctcaagct ctggctcatc
     1981 cccaccgccg aagtcccgct gaccaatctc gcgcgcgaga cgatcctcga ggaggatgcg
     2041 ctgccgctgc gcttcaccgc ctgcacgcca tgctttcgcg ccgaggcggg cgccgccggc
     2101 aaggatacgc gcggcatgat ccgccaacat cagttcgaca aagtcgagct cgtgtccatc
     2161 actacgcccg agcagagccg cgatgagcac gaacgcatgc tggcctgcgc cgaagaagta
     2221 ttgaggcgac ttgatttaca ctaccgcgtg gtcatgctct gcaccgggga catgggcttt
     2281 gccgcgcaga agacctatga catcgaggtg tggttgcccg ggcagaacat gtttcgtgag
     2341 atttcctcgt gctcgctctg cggcgagttt caggcgcggc gcatggacgc gcgctaccgt
     2401 cccaagggtg cccgccaggt gcgctacgtg cacacgctca acggctccgg cgtcgcggtc
     2461 gggcgcgcgc tcatcgccgt catggagacg taccaacaac agggcggctc gatcgcggta
     2521 cctgaggtgc tgcagcgcta tatgggcggc ttgaagacca ttgagcgcgc gggatgacgc
     2581 aggacaaacg cgagggagtg gtagatgcgc ggggggagca cattccctcg tccgagctcc
     2641 atgcccgacc atccgagcgc atgcgcattc tcatcaccaa cgacgacggc atccattcgg
     2701 aggggctcga ggtctgcgcc gagatcggcc gcgcgctgtc cgacgacgtc tgggtgatcg
     2761 cgccggagtt cgaccagtcc ggcgtctcgc attcgctctc gctcaacgat ccgctgcggc
     2821 tgcgcgagat cggcgagcgc cgctttgcgg tcaaaggcac gccgacagac tgcgtcatca
     2881 tgggcgcgcg ccacgtgatc aaggctcgcc cgcccaacct ggtgctcgcc ggcgtcaacc
     2941 gcggccgcaa cgccggcgaa gacgtgatct attccggtac cgtcgccggg gcggtcgagg
     3001 gcaccattct cggtattccc tcgctcgcat tgtcgcaggc ctatcggtcg cgcagcggcg
     3061 agccgcccca ttgggagacc gccgtccgtt tcgggccgga catcatccgc cgcgtgctcg
     3121 ccgccggcat tccccgcgac gtgctcgtca acatcaactt tcccgattgc gcgcctgcgg
     3181 acgtcaaggg cgtcgcagtg acgagccagg gccgaaatcg gcaggagcgg ctgcagatcg
     3241 accaacgcca ggacggccgc ggcaacgcct attactggat cgcctatgtg cgcatgcgcg
     3301 cgcagccgcc ccacgatggc agcgacattt ccgcactttc cgacaatcgc atcgcagtga
     3361 cgccgctgcg gctcgacatg accgacgagc catttatgac gcgattggcg cagctgttcg
     3421 attgaggcgc atcccgggcg gggcgcagtg tcaattcgtg ccgccgtcca acgcgctttg
     3481 cagcatctgc ttgaggcctt ccagctggaa cggcttcttc aacgtaggcc gattgcgata
     3541 agcttctggc agacctcgct cgccatagcc ggttgcgaac acgaacggcg tgccgcgggc
     3601 gacgagggct tcagcgaccg ccagaaccgg ctcgccctcg agattgaggt cgagaatcgc
     3661 gagatcgaag tcggcggtct tggctgcgtg tagcgcctcg tcgatgcgcc cagcctgggc
     3721 cgcgacagtg taaccgagtt cacttaacat gtcttcgagc agcatgcgga tcatcagttc
     3781 gtcttcgacg acgaggaccc gcttgctcgg tggtgccggc gcaacctgga tggcggcggt
     3841 catctgtctc cccggtttgc gatccagcac gcaggccgca ggggagcaga ccctcaaggc
     3901 gaagttgggg cacctccttc ggccggatcc tcgggcggcc gcgcgacggc cttgatcccg
     3961 tgcgacgcgg gcgtcaaggc attggatttg cgaccgtttc gccgcgcggt ggtcgattgc
     4021 gggttttggg ttaaattcag cgaggaggct cggcgtgccc aagcaaccgc ccggcgacga
     4081 cagtgtcggc cgcatgcagt tcctgctcgg cctgcgcagg cgcggcatca gcgatcctgc
     4141 ggtgctgcgt gcgatggacg aggtgccgcg cgagcatttc gtcgaaagct cgttcatgga
     4201 caaagcgtat gcggaccaag cgctgccgat cgcttgcggt cagaccatca gccaacccta
     4261 cgtagtcgcc ttcatgaccg agcagctcga cgtgcagccg agccaccgcg tgctcgaagt
     4321 gggtaccggc tcgggctatc aggccgccat tctctctcgt ctggcgcggg aggtcgtcag
     4381 cgtcgagcgc tatcggacgc tggcggaggc ggcgcggcgg cgcttgtcgg cgctaggcta
     4441 tgacaacgta gagctactgg tcggagatgg gctcgctggc gtgccggagc gcgcgcccta
     4501 cgaccgcatc atcgtcaccg ccgccgccga aatcattccc gatgcgcttg tcggcgagct
     4561 tgccgataat ggcgcgatgg tattgccgct cgggccgcac gctgggccgc agcaactggt
     4621 caagctcaca aagggtgaac aaggacttaa gcaggaggat ctgatcgggg tgcgcttcgt
     4681 gccgcttttg cccggaaagg cgcgcgaact gtaacgattt tgttcgcgcc gcggcgaggt
     4741 tgcggcgcgc aagcccttaa aggcgtatta acccgcaacg tattaactcg atacgcgtgt
     4801 cgcgtgcgag tatgtgcgat gtggggcgtt ggggaaatat tgcgttcgcg gctatttccg
     4861 cgggtagctg tgctggcgct gatggctgcc ggcctagccg cctgtagctc ggacacatct
     4921 cgattcaacg aaaatccgtt cgcttcgctg agccattccg acgccaccgc atcgatctcg
     4981 cagacgcaaa ccgcacaagg tccgcagccc tatccggcca ctgccgcca
//
LOCUS       DATCWM010000272         2552 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_272218, whole genome shotgun sequence.
ACCESSION   DATCWM010000272 DATCWM010000000
VERSION     DATCWM010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2552
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_272218"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(152..1252)
                     /locus_tag="VIQ50_05225"
     CDS             complement(152..1252)
                     /locus_tag="VIQ50_05225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359813.1"
                     /translation="MTDTLLVSTRKGLFTVARKVNQWEVTAVDFLGDNVTIALTDRRD
                     GARYAALDHGHFGVKLHRSTGNGWEEIAVPAYPPKPEGYEEHDMWGRPINWSTTRVWG
                     LEAGGADEPGVIWCGTLPGGLFRSNDRGQSWNMIRSLWDHPKRKQWMGGGADLPGIHS
                     IRVDPRNSKRVWIAVSTGGIWFTDDGGASWSLRGEGMRAEYAPPEQTHDPIAQDVHCL
                     AQCRAAPQRMWVQHHNGIFVSSDEGESFTEIAGVEPSTFGFPVVVHPREPDTAWFVPE
                     IKDEKRIPREGKLVVTRTRNGGKSFDVLTKGLPQSHAYDIVYRHALALDERGERLAFG
                     STTGGLWVSEDQGDSWACVTHTLPPVYAVHFA"
     gene            complement(1255..1524)
                     /locus_tag="VIQ50_05230"
     CDS             complement(1255..1524)
                     /locus_tag="VIQ50_05230"
                     /inference="COORDINATES: protein motif:HMM:NF014636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HEY9359814.1"
                     /translation="MAKVVFTPNIQRHVELPQAEASGRTVRDVLEAVFADHPQARGYV
                     LDDQSALRKHMTIFVDGRMIHDRTRLTDAVSESSTVYVFQALSGG"
     gene            complement(1726..>2552)
                     /locus_tag="VIQ50_05235"
     CDS             complement(1726..>2552)
                     /locus_tag="VIQ50_05235"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9359815.1"
                     /translation="ARVLREPLSQALGQNIVIDNRGGAGGTTGAVAVANARPDGYTLL
                     LSVNSALTTNKFLQKNFPFDPKTAFAPITLTSDVALVLAVHPSLPAHDVTELIAYAKT
                     NKLAYASAGIGTSHHILGELIKQKVGIDMVHVPYRGGASLMQDLIAGNVKVAFSTLPV
                     ALPQAQVGTIRIIAVAEKTRLPELPETPTIEETVPGVVNVGWNGLLAPAGTPAPIIDK
                     LNAVTVAALKTPDVMAKMKLQGLHVMNSTPAEFAALIAREVDDWAKIIPSIGIRSD"
BASE COUNT          439 a          821 c          818 g          474 t
ORIGIN      
        1 tccggcgatc tgagcccgct cagcgagcga ggccgctgcc tggcggcctt cgccgcacgg
       61 tcccgcttgc ccaatctcca atggagaatg cagcagagcg cgttcgccgc tcgcgctgat
      121 gctcaaatcg cgcgcgtcgg caagtgcctc ctcaggcgaa gtgcaccgcg tacaccggag
      181 gcagcgtgtg cgtcacgcat gcccagctgt cgccctggtc ctcactgacc caaagaccgc
      241 ccgtcgtcga gccgaaggcg agccgctcgc cccgttcgtc gagcgccagc gcatggcgat
      301 aaacgatgtc ataagcgtgc gattgcggca ggcccttggt gaggacatca aagcttttgc
      361 cgccgttgcg cgtacgcgtc acgacgagct tgccctcgcg cgggatgcgc ttctcatctt
      421 tgatttcagg gacgaaccac gccgtatccg gctcgcgcgg atgcacgacg accgggaagc
      481 caaacgtcga gggttcaact ccagcgatct cggtaaagct ttcgccctcg tcggaagaga
      541 cgaaaatgcc gttatggtgc tgcacccaca tgcgctgcgg cgccgcgcgg cattgcgcga
      601 gacaatggac gtcctgggcg atgggatcgt gagtctgctc gggcggggcg tattcggcgc
      661 gcatgccttc gccgcggagg ctccagcttg cgccgccatc gtcggtgaac cagatgccgc
      721 cggtcgagac cgcaatccac acgcgcttgg aattgcgcgg gtccacgcgg atcgagtgaa
      781 tgccgggcag gtcggcgccg cctcccatcc actgcttgcg cttggggtga tcccagagcg
      841 agcggatcat gttccagctc tgcccgcgat cgttcgacct gaataggccg cccggcagcg
      901 ttccgcacca gatgacgccg ggctcgtccg cgccgcccgc ttcgagcccc cacactcggg
      961 tcgtgctcca attgatcggc cggccccaca tgtcgtgctc ttcgtaaccc tcgggcttgg
     1021 gcggataggc gggcacggcg atctcctccc aaccgttccc cgtcgagcga tggagcttga
     1081 cgccgaagtg gccgtggtcg agcgccgcgt aacgggcgcc atcgcgacgg tcggtcaacg
     1141 cgatggtgac attgtcgccc aggaaatcga ccgccgtgac ctcccactgg ttcactttgc
     1201 gcgcgaccgt gaacagacct ttgcgcgtag aaacgagaag cgtgtcagtc atcatcaacc
     1261 tcctgacaag gcctgaaaga cgtagacggt gctggactcg ctcaccgcat cggtcaatcg
     1321 cgtccggtcg tgaatcatcc ggccatcgac gaagatggtc atgtgcttgc gcagtgccga
     1381 ttggtcgtcg agcacatagc cgcgcgcctg cgggtgatcg gcaaacaccg cttcaagaac
     1441 gtcgcgcacg gtgcggccgg aggcttctgc ctgcggcaat tcgacatggc gctgaatgtt
     1501 gggggtgaag acaaccttcg ccatgatttg cgctcccctt tacggctgcg catcgcgatc
     1561 gaattgaatc acggccccgc cccgatgcgc gcatgttgcg ggcatccgcg tcttttttgg
     1621 ggcttgtttc gtgcgacaag gagcgcaccg cgcttcgaca cggggcggaa cacgttacca
     1681 ccatccgccg aattgcgccg cgacggactt acccccgaag caacgctagt ccgaacgaat
     1741 tccgatcgac ggaatgatct tggcccaatc atcgacctcg cgggcgatga gggcggcgaa
     1801 ttcggcaggc gtgctgttca tgacgtgcag gccctgaagt ttcatcttgg ccatcacgtc
     1861 cggcgttttc agcgccgcga ccgtcacggc gttgagcttg tcgatgatcg gcgccggcgt
     1921 tccggcaggc gcaagcaggc cgttccagcc gacgttgacg acgccgggga cggtctcctc
     1981 gatcgtgggc gtctcgggca gttccggcag gcgcgtcttc tcggcgacgg cgatgatgcg
     2041 aatggtgcca acctgcgcct gcggcagcgc caccggcagc gtgctgaaag ccactttgac
     2101 gttgccggcg atgagatctt gcatcaagga cgcgccaccg cggtaaggga cgtgcaccat
     2161 gtcgattccg actttttgct tgatcagctc gcccaagatg tggtggctcg tgccgatgcc
     2221 cgcgctggca taggcgagct tattcgtttt cgcgtatgca atgagctccg tcacgtcgtg
     2281 cgccggcagc gacggatgaa cggcgagcac gagcgcgacg tccgaagtga gcgtgatggg
     2341 ggcaaacgcc gtcttcggat cgaacggaaa gttcttttgc agaaatttgt tggtggtcaa
     2401 cgccgagttg accgagagga gaagcgtgta gccgtcgggc ctggcattgg cgacggcgac
     2461 tgccccggtc gtcccgccgg caccgccgcg gttgtcgatg acaatattct gcccgagcgc
     2521 ctggctcagc ggctcgcgca gaacgcgcgc ca
//
LOCUS       DATCWM010000273         2512 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_299083, whole genome shotgun sequence.
ACCESSION   DATCWM010000273 DATCWM010000000
VERSION     DATCWM010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2512
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_299083"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..370
                     /locus_tag="VIQ50_05240"
     CDS             <1..370
                     /locus_tag="VIQ50_05240"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030272 - 5-formyltetrahydrofolate
                     cyclo-ligase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HEY9359816.1"
                     /translation="GAQLALPVMCGRGKPLSMRAFDFGQRLIPGVWGIREPSADAAEV
                     FPDILLVPLLAFDRSGHRIGYGAGYYDLTIAALRARKTINACGLAFAAQEISSVPTTS
                     RDARLDLVLTEREVIDCRIP"
     gene            374..1195
                     /locus_tag="VIQ50_05245"
     CDS             374..1195
                     /locus_tag="VIQ50_05245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008974554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00282 family metallophosphoesterase"
                     /protein_id="HEY9359817.1"
                     /translation="MRILFIGDVVGRSGRAILLERLPGLVRDWKLDFVAINGENAAGG
                     FGITEAIYQEFVDAGADVITGGNHSWDQKEALVFIERAPRLLRPINYPAGTPGRGVAV
                     IEAKNGARVLILNAMGRIFMDPLDDPFAAVERELAPCQLRQAADAIIVDIHGEATSEK
                     QAMGHFCDGRVSLVVGTHTHVPTADHQILPRGTAYISDVGMTGDYDSVIGMDKEEPLA
                     RFLRKISGARFEPAIGEATLCAFAVETDDASGLARRVAVVRLGGRLEEARPKFWE"
     gene            1397..2143
                     /locus_tag="VIQ50_05250"
     CDS             1397..2143
                     /locus_tag="VIQ50_05250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEY9359818.1"
                     /translation="MAGHSQFKNIMHRKGRQDAAKSKLFGKLAREITVSAKLGLPDPG
                     MNPRLRAAIIAARAENMPKDNIDRAIKKASGGEAESYDEIRYEGYGPGGVAVIVEVLT
                     DNRNRTAGEVRATFTKSGGNLAETGAVSFMFDRVGVVEYDAKVTSAEAMLEAAIEAGA
                     EDVVSNEGGHEIYTTQESLREVAKALEAKFGEPRKAALVWKPQSTVAVNDEQGEKLFK
                     LIETLNEHDDVQNVYANFEVSDALMQKLSA"
     gene            2323..>2512
                     /locus_tag="VIQ50_05255"
     CDS             2323..>2512
                     /locus_tag="VIQ50_05255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019965105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004520 - DNA endonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HEY9359819.1"
                     /translation="MRHVIRILGIDPGLRRTGWGVVALEGNRLSFLACGSLATDGKAE
                     LAARLLVIHDGLRRVVEEH"
BASE COUNT          446 a          807 c          839 g          420 t
ORIGIN      
        1 cggcgcgcag ctcgcgctgc cggtgatgtg cggacgcggc aagccgctca gcatgcgcgc
       61 ctttgatttt ggccaaaggc tcatccccgg cgtttggggc atccgcgagc cttcggccga
      121 cgcggcggag gtcttccccg acattttgct ggtgccgctc ttggccttcg atcgcagcgg
      181 ccaccgcatc ggctatggcg ccggctacta tgacttgacc atcgccgcct tgcgcgcgcg
      241 caagaccatc aacgcctgcg gcctcgcctt tgccgcgcag gaaatctcga gcgtgcccac
      301 gacttcgcgc gacgcgcgcc tcgatctcgt gttaaccgag cgcgaggtca tcgactgccg
      361 gatcccctga cggatgcgca tcctcttcat cggcgacgtc gtaggacgca gcgggcgcgc
      421 tattttgctc gagcgccttc ccggactcgt gcgtgactgg aagctcgatt tcgtcgccat
      481 caacggtgag aacgccgccg gcggcttcgg catcaccgaa gcgatctacc aggaattcgt
      541 cgatgccggc gccgacgtga tcacgggcgg caaccattcc tgggatcaga aggaggcact
      601 ggttttcatc gaacgcgcgc cgaggctgct gcgcccgatc aattatcccg ccggcacgcc
      661 cggccgcggt gtagcggtga tcgaggccaa gaacggcgcg cgcgtgctca tactcaacgc
      721 aatgggccgc attttcatgg atccgctgga tgacccgttc gccgccgtcg agcgcgagct
      781 tgccccctgt cagctcaggc aggcggccga cgccattatc gtcgacattc acggtgaggc
      841 cacgagcgaa aagcaggcga tgggccattt ttgcgatgga cgcgtaagcc tggtcgtcgg
      901 cacgcacact cacgtgccga ccgccgatca ccagatcctg ccgcggggca ccgcctacat
      961 ttccgacgtg ggcatgaccg gcgattacga ctcggtgatc ggaatggaca aggaggaacc
     1021 gctcgcgcgg ttcctgcgca aaatttccgg cgcgcggttc gagccggcga taggagaggc
     1081 caccttatgc gccttcgcgg tcgagaccga tgacgcgagc gggctcgcgc gtcgcgtcgc
     1141 cgtcgtgcgt ctgggcggcc ggctggaaga ggcacggccg aaattttggg aatagactcg
     1201 cgtcccgcgc gttcccgcca cgactggtcc gatccgcggt atcggcgcta cagctctccg
     1261 ctgttctgga tttccggtga gccgcgtcct attttgaacg cgagcgcgtc ctagtcgcgc
     1321 gcccgagatc aattcgttgt ccgcggcttc gccatcgcgc tgtgcatgcg cgaggcgggc
     1381 cgtggaggag tacctcatgg ccggccattc ccaattcaag aatatcatgc accggaaggg
     1441 gcggcaggat gcagccaaat ccaagctgtt cggaaagctg gcgcgggaaa ttaccgtctc
     1501 cgccaagttg ggattgcccg atccaggcat gaacccgcgc ctgcgcgccg cgatcatcgc
     1561 tgcccgggcg gagaacatgc ccaaggataa catcgatcgc gcgatcaaga aggcgagcgg
     1621 cggcgaagcc gagagctacg acgagattcg ctacgaaggc tacgggccgg gcggcgtcgc
     1681 cgtcatcgtc gaggtcttga ccgacaaccg caaccgcact gccggcgaag tgcgcgcgac
     1741 cttcaccaaa tccggcggta atttggccga gaccggcgcg gtctccttca tgttcgatcg
     1801 cgtcggagtg gtcgagtacg acgccaaggt gacgagcgcc gaggccatgc tggaggccgc
     1861 gatcgaggcc ggcgccgagg acgtcgtgtc gaacgagggc gggcacgaaa tctacaccac
     1921 gcaagaatcg ctgcgcgagg tggcgaaagc cttggaagcg aaattcggcg agccgcgcaa
     1981 agccgcgctg gtgtggaagc cgcagagcac cgtggccgtc aacgacgaac agggcgagaa
     2041 actcttcaag ctgatcgaga cgcttaacga gcacgatgac gttcagaacg tctacgccaa
     2101 tttcgaggtc tcggacgcgc tgatgcagaa gctcagcgcg tagagctcgg cgagcgggcc
     2161 agcgacacca ggctgaacgg gagcgggggg cgccgaacgg gcgatgctgc cgggttcgcg
     2221 gtcgccaggg cctgccggca cggctcttcg aacatccaaa gcgggagagc ggcgcgaccc
     2281 gtctaggctg ttgccgccgg cggggctatc aacgggatcg tcatgcgcca cgtgattcgc
     2341 atcctcggca tcgaccccgg cctgcgccgg accggctggg gcgtggtggc gctcgaggga
     2401 aatcgcttga gcttcctcgc ctgcggctcg cttgcgaccg acgggaaggc ggagctcgcc
     2461 gcgcggctcc tcgtcatcca tgatggcttg cggcgcgtgg tcgaagaaca cg
//
LOCUS       DATCWM010000274         2877 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_412710, whole genome shotgun sequence.
ACCESSION   DATCWM010000274 DATCWM010000000
VERSION     DATCWM010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2877)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2877)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2877
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_412710"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..187
                     /locus_tag="VIQ50_05260"
     CDS             <1..187
                     /locus_tag="VIQ50_05260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359820.1"
                     /translation="RYFRWCGGGAAANKLFETGRFDTTETMHCRLTRQVVLDEVIAGI
                     EANMRPANVRPAYAGPS"
     gene            216..2111
                     /locus_tag="VIQ50_05265"
     CDS             216..2111
                     /locus_tag="VIQ50_05265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359821.1"
                     /translation="MLDHYWSVFFFFGLLVVTAFAWKRFNEPSFPSQESLPRTVDPLR
                     YLFFKTAYQKARLTYLFALLLLYVLLVAPGPKIAPALGTVGAKDFPAEGWALLAALIL
                     TGVGLAPDSLKWLNTVEELLRHWVHELFLVPDGVEKTIGVLEDARYEPPPSQLDLLQS
                     PRREKVQEDLKSPPETLRYRWARATILVTSLKQMGAGAAHPLKKAAFDPFEEDFDAIL
                     EKYRALKPDVEALSAGEASNFTEEQLSRSVDRLLRRLYAYISWGIRHQADSELEVDDT
                     LEELGFRIPKIGGRRLFDVVMPAVLFIALITMLFWVTNDTVRRAMGLSAPDRSESIVY
                     ALSSAMAAGLMYGGAVLIALRRRSAQIERKVWSEGSARCLIPIAIRAGLVTWAVITLT
                     TVLWGFSETWQSLAGMLQLVGPFASGGSESAVPFAQWSFLPVRIATALPWLLAGATAS
                     AVLASSLGGDARSTNRSQRMIDAVFIGGALGVAVGSAQLLQNALMEMIDHTPRSVDEI
                     ISVGLAGFACGAVIGFKVPWGYKTNLVTPPDPVMARALRDLLRQAESALGSKVAAENW
                     VFTPHPDLGWITPAEAAQYKTHATGVKRLLESEAAARREQARADRPTPVVIEGGRSAP
                     RIAGVPA"
     gene            complement(2406..>2877)
                     /locus_tag="VIQ50_05270"
     CDS             complement(2406..>2877)
                     /locus_tag="VIQ50_05270"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9359822.1"
                     /translation="ELFKLLLGSDLVHVPFNGSAPAIQSTLGGHTQFAFVVLAPAVPH
                     IKEGSLRGLAVLSAQHSSALPEVPTIAEAGFPGQEADTLLGVLAPAGTPKEIIDLLHR
                     EIVRIVALPEVKEQLDAIGFVPVANTPDEFAAVIKVESERWAKVIRAANLKAEP"
BASE COUNT          490 a          870 c          974 g          543 t
ORIGIN      
        1 ccgttatttc cgctggtgcg gcggcggcgc cgcggcgaac aagctgttcg agacgggacg
       61 attcgacacg accgagacga tgcactgccg gctgacgcgt caggtggtgc tcgatgaagt
      121 gatagcggga atagaagcga acatgcggcc agcgaacgtg cgacccgcct atgccggtcc
      181 ctcgtgacga gggccgatga tccggagcaa ccgtcatgct tgatcattac tggtccgtct
      241 tcttcttctt tggcctcttg gtcgtgacgg ctttcgcttg gaagcgcttc aacgaacctt
      301 cctttcccag tcaggagtcg ctgccgcgga cggtcgatcc gcttcgctac ctttttttca
      361 agacggccta ccagaaggcg cgcttgacct atcttttcgc gctgctgttg ttgtacgtcc
      421 tcctggtggc gcccggtccg aagatcgccc ctgcgctcgg caccgtcggt gctaaggact
      481 tccccgccga gggttgggcg ttgctggcgg cgctcattct caccggcgtg ggactcgcgc
      541 ccgattcgct gaagtggctc aacacggtcg aggagttgct gcggcactgg gtgcatgaat
      601 tattcctggt gcccgacggc gtggaaaaga cgatcggcgt cctcgaggat gcgcgatatg
      661 aaccgccgcc gagccagctc gatctgctgc agagtccgcg tagggagaag gtgcaggagg
      721 atctgaaatc gccaccggaa acgctgcgct atcgttgggc gcgcgccacc attctggtga
      781 cgtcgctgaa acaaatgggg gcaggggccg cgcacccgct gaaaaaggcc gccttcgacc
      841 cgttcgagga ggatttcgac gccatcctcg agaagtaccg cgcgctcaaa ccggatgtgg
      901 aggcgttgag cgccggcgag gcgagcaatt tcaccgagga gcagctcagc cgatcggtgg
      961 atcgtctgct caggcgcctc tacgcctata tcagctgggg catccgccat caggccgaca
     1021 gcgaactgga agtcgacgat acgctggagg agctcggttt ccgtatcccc aagatcggcg
     1081 gccgccgcct gtttgacgtc gtgatgccgg cggttctgtt cattgcgctg atcacgatgt
     1141 tgttctgggt aacgaatgac acggtgaggc gcgccatggg gctgtcggct cccgaccgct
     1201 ccgagagcat cgtctatgcg ctgtcctccg cgatggccgc tggcttgatg tacgggggtg
     1261 cggtgctgat cgcgttgcgc cggcgctcgg cgcagatcga gcgcaaggtg tggagcgagg
     1321 ggtcggcgcg atgtctgatc ccgattgcca tccgcgccgg cctggtcacc tgggcggtga
     1381 tcacgctcac cacggtgctg tggggcttct cggagacatg gcagtcgctc gccgggatgc
     1441 tgcagttggt cggaccgttc gccagcggcg gctccgaaag cgcggtgccc ttcgcccaat
     1501 ggagtttcct gcccgtgcgg attgcgaccg cgctgccctg gctgctcgcg ggtgcaacgg
     1561 cgagcgcggt gctggcgagc tcgctcggcg gcgacgcgcg atcgaccaac cggtcgcaac
     1621 ggatgatcga tgcggtgttc atcggcggcg ccctcggcgt agccgtcggc tcggcgcagt
     1681 tgctgcagaa cgcgctgatg gagatgatcg atcacacccc gcgttcggtc gacgagatta
     1741 tcagcgtggg attggcgggc tttgcttgcg gtgcggtgat cgggttcaag gtaccctggg
     1801 gctacaagac caatctcgtg accccgcccg atccggtgat ggcgcgtgcg ctccgtgatt
     1861 tgctgcgtca ggccgaaagc gcgctgggca gcaaggtcgc cgctgagaac tgggtattca
     1921 cgccgcaccc cgatctcggc tggattacgc cggccgaggc cgcgcagtac aagacccacg
     1981 cgaccggcgt gaagcggttg ctggagagcg aagccgccgc ccggcgcgag caggcccgcg
     2041 ccgaccggcc gacccccgtc gtcatcgaag gggggcggag cgcgcctcgc attgcaggcg
     2101 tgccggctta ggcggtgaaa ggcggctcag aagagctcgc ttatgagatc ctgcgtgatc
     2161 agcggatgcg agaagtagat ctccgcgtga acaaggacga atgttgcggc caacatcatc
     2221 aagagcgcgg taccgatctt gagaataaat gctgtggggg gtgtaaccgg tagctgctca
     2281 gcccgcatca tcatgaccct ctattgcatc gatccggcaa acaaaaagcg cgccgaaggt
     2341 cttcgccgca ggaggtctgc gtagcgatct gcttgcggcg gccgtcttgg cacgatgcgc
     2401 agcactcacg gttccgcctt gaggttggcg gcgcgaatga ctttggccca gcgttcggat
     2461 tccactttga tgacagcggc gaactcgtcc ggcgtgttgg ccaccggcac gaagccgatg
     2521 gcatcgagct gctctttcac ctcgggcagc gcgacgatgc gcacgatttc ccggtgcaga
     2581 agatcgatga tctctttcgg cgtcccggcg ggagccagca cgccgagcaa ggtgtcagcc
     2641 tcctggccgg gaaatcccgc ctcggcgatc gtcggcacct ccggaagcgc ggaggaatgc
     2701 tgagcgctca agactgctag tccccgcagg cttccttcct tgatgtgcgg tacggctggc
     2761 gcgaggacga cgaaggcgaa ctgagtgtgg ccgccgaggg tcgactggat cgccggcgcc
     2821 gaaccattga acggcacgtg tacgagatcg gatccgagca acagcttgaa cagctcg
//
LOCUS       DATCWM010000275         4105 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_498822, whole genome shotgun sequence.
ACCESSION   DATCWM010000275 DATCWM010000000
VERSION     DATCWM010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4105)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4105)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4105
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_498822"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..356)
                     /locus_tag="VIQ50_05275"
     CDS             complement(<1..356)
                     /locus_tag="VIQ50_05275"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEY9359823.1"
                     /translation="MAMAAGIERSKRAKQESGGNVAAAYLALLADRGVDYLFGNAGTD
                     FAPLIEAYSRAAQTGVAVPQPILATHENLAVTMAHGYGMISRRIPAVMVHVSVGTANM
                     ICAALNAARENVAILLT"
     gene            589..1614
                     /locus_tag="VIQ50_05280"
     CDS             589..1614
                     /locus_tag="VIQ50_05280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359824.1"
                     /translation="MKRICMIIAALALFLAPMRAMAQDKLVISVWGGSWRDMVDNLIG
                     KKFTAATGVPVEYITGGTIDRLNKEKLAKGNPESDITFTTSHVGWLYANDGLYETLDL
                     TKVPNAANLVEQARISPYHIGTWAYVYTIGYRPDLFKGVAFESWADLWKPELKGKLAA
                     PDFDPSHLIVVSAILSGGDAATWEKGQAKLKELKPNFKAFYTNDANSQQLIANGETPV
                     QVILSMNAHYMAGEGVPIQLVIPKEGAVLGIDTVAIMKGSKRAELAYKFINIALDPQV
                     QAEVAKFKKGSPVVLNAKLDPAVAKLPGVFTSVEQWNKQAIVIDHKLRAEKTAEWRKW
                     FAENIMN"
     gene            1667..2518
                     /locus_tag="VIQ50_05285"
     CDS             1667..2518
                     /locus_tag="VIQ50_05285"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012320175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9359825.1"
                     /translation="MSQRPFLRLFVTPAVLCALGFAAALAAVMQYSLRAYVPGSLEAG
                     GFTLDNFAALLRPLYARVFLETMWICFLTAFFTLLVGYPLAYALVHARHVALKSAILV
                     IAVTPLFLGEVVRTYSWIVVLGNNGFLNAVLLRLGLIDAPVQFMFTQFGVVTALVHVT
                     LPIMVIMLAAALSHIDRDYERAAASLGAGPIRAFLTITLPLSTPGIVAGVTTAFAWTF
                     SAFATPQLIGGGRVNMISNLVYQLGFASFNFPFAASLSVAGLLLTFAVLGLMRVAAGP
                     LETIRQH"
     gene            2528..3337
                     /locus_tag="VIQ50_05290"
     CDS             2528..3337
                     /locus_tag="VIQ50_05290"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9359826.1"
                     /translation="MRSQSLLRLLGGAAVALILGFLLLPGLVVTLAAFNSRAILSFPP
                     ESWSWRWFAKAIAYEDFQAGFRNGLIVTACASSIALVVGAAFAFALDRYEFRLKRALE
                     TVLLSPLVVPHFTIGLGFLILAAQVGLARGYAVVVACHVVLVLPFVLRSVYISLRNLD
                     PRLELAAASLGAPPRRVLTTITVPLLLPGLVSGWLFAAILSFNEFTASLFVTSQRTQT
                     LPVALYNYVREYADPSMAAVSVIYIVVTATLLILANVFLGLAKVLAVEQPR"
     gene            3417..>4105
                     /locus_tag="VIQ50_05295"
     CDS             3417..>4105
                     /locus_tag="VIQ50_05295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY9359827.1"
                     /translation="MTKRFGKTTALDDVSLMVRRGELMTLLGPSGCGKTTLLNLVAGF
                     LTPDSGEIAIAGRRMTDVPAYRREIGIMFQNYALFPHMSVAANVGYGLRMRRIAKAEI
                     ARRVGEALALVKLAGLEDRKPRQLSGGQQQRVALARALVIRPQVLLLDEPFSALDRNL
                     RASMQVELKEIQRKLGVTAIFVTHDQSEALSLSDRIAVIADGRIRQLDIPDEIYRHPL
                     DRFVASFIGDA"
BASE COUNT          676 a         1357 c         1262 g          810 t
ORIGIN      
        1 gtgagtagga tggcgacgtt ctcgcgcgcc gcgttcaaag ccgcgcagat catgttggcg
       61 gtgccgacgc tgacgtgcac catcacggcc gggatgcgcc gcgagatcat gccgtagccg
      121 tgcgccatgg tgacggcgag attttcgtgg gtggcgagga tcggttgcgg aacggcaacg
      181 ccggtttgtg ccgcccgcga gtaggcttcg atgaggggcg cgaagtccgt gcccgcgttg
      241 ccgaacaagt agtcgacgcc tcgatcggct aggagcgcga ggtaggccgc cgcgacattt
      301 ccgcccgact cctgtttcgc tcgcttgctc cgctcgatgc ccgctgccat cgccatcaac
      361 tcctgttctc gcacgcaatc taccctcaag gtcgggcgtc aaccaagcct ggcgcggcga
      421 ccttgccggg gcacgtcact gcccaacgcg gccggctttc cgcgacgctg gacaagctct
      481 gccgtctcaa cgaataatgt cgagccggag atcgacgggt gtttgctcga gcctctgcaa
      541 atccgtctga cgtcgaacgg atcgtcgagc aaatcggaaa ggtgggacat gaaacggatt
      601 tgcatgatca tcgctgcgct ggctctgttt ctggcgccga tgcgggccat ggcgcaggat
      661 aagctcgtca tcagcgtctg gggcgggagc tggcgcgata tggtcgacaa cctcatcggc
      721 aagaagttca ccgccgcgac cggcgtgccg gtcgagtaca tcaccggcgg cacgatcgat
      781 cggttgaaca aagagaagct cgccaaaggc aatccggaaa gcgatattac cttcacgacg
      841 tcgcatgtcg gctggctcta cgccaacgac gggctgtacg agacgctcga tctcaccaaa
      901 gtgccgaacg ccgccaactt ggtcgagcag gccaggatca gcccctatca catcggtacc
      961 tgggcttatg tctataccat cggctaccgg ccggacctgt tcaaaggcgt ggcgttcgag
     1021 agttgggcgg atctctggaa gccggaactc aagggcaagc tcgccgcgcc ggacttcgat
     1081 cccagtcatc tcatcgtcgt ttccgcgatc ttgtcgggcg gcgacgcggc gacctgggag
     1141 aaggggcaag ccaagcttaa ggagctcaag ccgaacttca aggcgttcta cacgaatgac
     1201 gcgaacagtc agcagctcat cgccaacggc gagacgccgg tccaggtgat cttgtcgatg
     1261 aacgcgcact acatggcggg cgagggcgtt cccatccagc ttgtcattcc caaagaaggc
     1321 gcggttctcg gcatcgacac cgttgccatc atgaagggct ccaagcgggc agagctcgcc
     1381 tacaagttca tcaatatcgc cctcgacccg caggtgcagg cggaagtcgc caaattcaag
     1441 aagggcagcc ctgtggtgct caacgccaag ctcgatcccg ccgtcgccaa gttgccgggc
     1501 gtgttcacct cggtcgagca gtggaacaag caggccatcg tcatcgatca caagctgcgc
     1561 gcggagaaga ccgcggaatg gcgaaagtgg tttgccgaga acatcatgaa ctgacggcgt
     1621 gagcgcgtaa gctgcgcgtg cgcgcattcc gctcaggcgc caggagatga gccagaggcc
     1681 gttcttgcgc ctgttcgtga cgccggccgt gctgtgcgcg ctcggcttcg ccgccgcgct
     1741 cgcggcggtg atgcaataca gcctgcgcgc atatgtgccc ggctcgctgg aagctggagg
     1801 cttcacgctc gacaacttcg ccgcgctgtt gcggccgctc tatgcgcggg tgtttctcga
     1861 gacgatgtgg atctgctttc tcacggcttt cttcacgctg ctcgtcggat acccgctcgc
     1921 ctacgcgcta gtgcacgcaa gacacgtcgc gctcaagtcc gcaattctgg tgatcgccgt
     1981 caccccgctg ttcctcggcg aggtggtgcg cacgtattcc tggatcgtcg tgctcggcaa
     2041 taacggcttc ctcaacgcgg tgctgctcag gctcgggctg atcgatgcgc ccgtgcaatt
     2101 catgttcacc caattcggcg tcgtcaccgc gctcgtccat gtcaccttgc cgatcatggt
     2161 gatcatgctg gctgcggcgc tctcccacat cgaccgcgat tacgagcgtg ccgccgcgag
     2221 cctcggggcc gggccgatcc gtgcctttct caccataacg ctccccttat ccacgcccgg
     2281 aatcgtcgcc ggggtcacca ccgcgttcgc ctggaccttc agcgcgtttg ccactcccca
     2341 gctgatcggc ggcggtcgcg tcaacatgat ctcgaacttg gtctatcagc tgggattcgc
     2401 gagcttcaac ttcccgttcg cggcgagcct gtcggtcgca ggactgctgc tcacattcgc
     2461 ggtgctcggg ctaatgcgcg tggccgccgg tccgctcgaa acaatccgcc agcactgagg
     2521 tgcacgcttg cggtcgcaaa gcttgctgcg cttgctgggt ggggccgccg tagccctcat
     2581 tctcggcttc ctgctgctgc cgggattggt tgtcaccctt gccgccttca acagcagggc
     2641 gattttgtcg ttcccgcccg agagctggtc gtggcgctgg ttcgccaagg caatcgccta
     2701 cgaggacttt caggcgggct tccgcaacgg gctcatcgtg accgcctgcg cgtcctccat
     2761 cgccctcgtc gtcggagcgg cgtttgcctt cgcgctcgat cgctacgagt ttcgtctcaa
     2821 gcgcgcgctg gagacggtat tgctctcacc gctcgtggtg ccgcacttca cgatcggcct
     2881 tggatttctg atcctcgccg cccaggtcgg tttggcgcgc ggctatgcgg tggtcgtcgc
     2941 ttgccacgtg gtgctcgtgc tgccgttcgt gctgcgcagc gtctacatct cgctgcgcaa
     3001 cctcgacccg cgcctggagc tcgccgccgc gagcctgggc gcgccgccgc gccgcgtgct
     3061 cacgaccatc accgtgccat tgctgctgcc aggcctcgtc agcggctggc tgttcgcggc
     3121 gatcctctcg ttcaacgaat ttaccgcttc gctgttcgtc acatcgcaac gcacgcaaac
     3181 cctgccggtt gccctctaca attacgtgcg cgaatacgcc gacccctcga tggccgcggt
     3241 ctcggtcatc tacattgtcg tcacggcaac gctgctgata ttggccaacg tctttctcgg
     3301 tcttgcaaag gtcctcgccg ttgagcagcc ccgctgaagg caagctgtcc gctccgcctg
     3361 tcgcgccggc gagccggacg agcggcggag agcacttcgc cgtcgcgctc gacggcgtga
     3421 ccaagcgctt cggcaagacc actgcgctcg atgacgtatc gctgatggtc cgccgcggcg
     3481 agctgatgac gctgctcggt ccatcgggct gtggcaagac cacgttgctc aacctcgttg
     3541 ccgggttcct cacccccgac agcggcgaga ttgccatcgc cggccggcgg atgacggatg
     3601 ttcccgcgta tcggcgcgag atcggcatca tgtttcagaa ctatgcgttg ttcccgcaca
     3661 tgagcgtggc ggcgaacgtc ggctatgggc tgaggatgcg ccgcatcgcc aaggctgaga
     3721 ttgcgcgccg cgtcggcgag gcgcttgcgc tcgtcaagct cgctggcctc gaggatcgca
     3781 aaccccgcca gctctcgggc gggcagcagc agcgcgtcgc gcttgcccgc gcgctcgtca
     3841 tccgtcccca ggtgctgctg ctggacgagc cgttctcggc gctcgatcga aacttgcgcg
     3901 cgtcgatgca agtcgagctc aaggagattc aacgcaagct cggcgtcacc gcgatctttg
     3961 tgacccacga ccagagcgag gcgctgagcc tgtccgaccg catcgcagtg attgccgacg
     4021 gccgcatacg ccaactcgac atccccgacg agatctaccg tcatccgctc gatcgcttcg
     4081 tcgcctcctt catcggcgat gccaa
//
LOCUS       DATCWM010000276         2977 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_223620, whole genome shotgun sequence.
ACCESSION   DATCWM010000276 DATCWM010000000
VERSION     DATCWM010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2977)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2977)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2977
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_223620"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            134..643
                     /gene="fae"
                     /locus_tag="VIQ50_05300"
     CDS             134..643
                     /gene="fae"
                     /locus_tag="VIQ50_05300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016920808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016840 - carbon-nitrogen lyase activity
                     [Evidence IEA];
                     GO_process: GO:0016051 - carbohydrate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formaldehyde-activating enzyme"
                     /protein_id="HEY9359828.1"
                     /translation="MPKISGTCVGESLVGDGNEVAHVDLLLGPRGGAVEQAFTNALTN
                     NKDGFTTLLAVVAPNLLCKPPTILYNKVTIKDARQAVQMFGPAQYGVAKAVADSVAEG
                     VIPANEADDLFITVGVFIHWEAKDDKKIQDFNYRATKEAIARAVKGEPKASTVTAEKD
                     KVHHPFAAG"
     gene            complement(752..1480)
                     /locus_tag="VIQ50_05305"
     CDS             complement(752..1480)
                     /locus_tag="VIQ50_05305"
                     /inference="COORDINATES: protein motif:HMM:NF013168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HisA/HisF-related TIM barrel protein"
                     /protein_id="HEY9359829.1"
                     /translation="MTNFTVIPALDLKGGMVVHAVGGDRTAYSPIASPFGAADDPAAI
                     ARGLLTTTGSPDLYIADLDAIAGIGNHFELVRGLSYALPGATLWIDAGFSDVADCAFW
                     LPLGATLVIGSESLLAVDDWRNIHGAFGESVVLSLDYGTDGSRGPEPLFSDPALWPLR
                     LIAMDLTRVGTDTGPNVERLKTIVGEASGRAVYAAGGVRNARDLEAIAALDAQGAVIA
                     TALHSQAITQKEIAALQGERRSQS"
     gene            1654..2682
                     /locus_tag="VIQ50_05310"
     CDS             1654..2682
                     /locus_tag="VIQ50_05310"
                     /inference="COORDINATES: protein motif:HMM:TIGR03123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEY9359830.1"
                     /translation="MTSMVGWDLGGANLKLARVEEGRVVQVAQIPCPIRQDRSKFDVA
                     LGEALKLCPSGARHTVTMTGELSDVFADRGEGVAYLVAMMRKATGDGTRFYGGRAGLL
                     NPEQAIERHLDVASANWHASAALIAMKCRDGLFVDAGTTTTDIIPLKSGLPAARGYTD
                     AERLAEGELIYAGVVRTPVMAMAREVPFKGRAQRIAAERCATMADVWRLVGELPYDAD
                     PYPTPDLRGKSAKESAARLARMLGRDLGDAELPDWIAVASYLAERQLAEIEVAASALI
                     LREELGPEAPVIGAGCGRFMASRVAQRLGRAYRDFGDMINCAQEAREMAARSAPAVAV
                     ALLAETLS"
     gene            2797..>2977
                     /locus_tag="VIQ50_05315"
     CDS             2797..>2977
                     /locus_tag="VIQ50_05315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359831.1"
                     /translation="MQRLRAQSLRHYLKLPPTLPVHRWVETVGYWKRYCRFNDCTGTN
                     VVVVPTPAVPAVPAPV"
BASE COUNT          548 a          890 c          989 g          550 t
ORIGIN      
        1 gcggagctct aaccaggagt tgccggacgg aagcgtgtta gctaagcaac gttcgccggc
       61 ttgccgtcgg cggcatcgcc gccagcgccc gccagtttgt tctgtcgtaa cagcccatta
      121 gggagggggt ttcatgccca agatcagtgg tacttgtgta ggcgaatcgc tagtcggcga
      181 cggcaacgaa gttgctcacg tcgatctgct gcttggtccg cgcgggggcg ccgtagagca
      241 ggcgttcacc aatgcgctga ccaacaacaa agatggcttc accaccctgc ttgcggtggt
      301 agcgccgaac cttttgtgca agcccccgac gatcctttac aacaaggtga ccatcaagga
      361 cgcccgccag gcggtgcaga tgttcggccc ggcgcaatac ggcgtggcca aggcggtcgc
      421 cgattcagtc gccgaaggcg ttatccctgc gaacgaggcc gatgacctgt tcatcaccgt
      481 cggcgtgttc atccattggg aagccaagga cgacaagaag atccaggact tcaactatcg
      541 cgccacgaag gaagccatcg ctcgcgccgt gaagggcgag ccgaaggcct cgaccgtcac
      601 tgcggagaag gacaaggtcc accacccgtt cgcggccggt tgaaagggag aacccccagg
      661 tcgggggcaa cccggcaaac aggctggtcc gggcccgatt cggcggtggc tccaaaaatt
      721 gggtttctga cgaacgggcg cgtcggcgcc tttaggattg ggatcgccgc tctccctgga
      781 gggcggcgat ctctttttgg gtgatggctt gcgagtggag cgcagtcgcg atcaccgcgc
      841 cttgcgcgtc gagcgcggcg attgcctcga ggtcacgtgc attgcgtacg ccgcccgcgg
      901 catagacggc gcggccgctt gcctcgccaa caatggtctt gagccgctcg acattggggc
      961 cggtatcggt gccgacgcgc gtcagatcca tggcgatgag ccttagtggc cagagcgcag
     1021 gatcgctgaa cagaggttcg ggaccgcggc tcccgtcagt gccgtaatcg agcgacagga
     1081 cgacgctctc gccgaacgct ccgtgaatat tgcgccagtc gtcgacggcg agcaggcttt
     1141 cgctgccgat caccagagtg gcaccgagag gcagccagaa ggcgcaatcg gcaacgtcgg
     1201 agaatccggc atcgatccac agcgtggcgc ccggcagcgc ataagagagg cctcgcacca
     1261 gctcgaaatg attgccgatg ccggcgatgg catcgaggtc ggcgatgtag aggtccggcg
     1321 aacctgtggt tgtgagaagc ccgcgggcga ttgcggccgg gtcatccgcc gcgccgaatg
     1381 ggctcgcgat cgggctgtag gcagtgcggt cgccgcctac ggcatgcacg accatgccgc
     1441 ctttgaggtc gagcgccggg atcacggtga agttggtcat tgaggccacc ttgggcttcc
     1501 taattctgtc atgcccggct ttatgcctag catccacagt attgtcattg cccggcctga
     1561 ccgggcaatc cagtaatcgg tggacgcggt tagtgaacga agtcctggga ttactgaatt
     1621 cccgctttcg cgggaatgac gcatgaggat cacatgacct cgatggtggg gtgggatttg
     1681 ggcggcgcca atctcaagct cgcgcgcgtc gaagagggac gcgtcgtgca ggtggcccag
     1741 atcccctgcc ccatccggca agatcgcagt aagttcgacg tggcacttgg cgaagctctc
     1801 aagctttgcc ccagcggcgc acgccatacc gtgaccatga ccggcgagct gtccgacgtg
     1861 ttcgcggatc gcggcgaagg cgttgcctat ctggtcgcga tgatgcgcaa ggccacgggc
     1921 gatggcacgc gattttatgg aggcagggca ggcctcctca atcctgagca agcgatcgag
     1981 cgtcatctcg atgtggcgtc ggcgaattgg catgcgagtg ccgcgctcat cgcaatgaag
     2041 tgccgcgacg gactcttcgt cgatgccggc accaccacga cagacatcat tccactcaaa
     2101 tcgggattgc cggcagcacg gggatatacg gacgccgagc ggcttgccga aggcgagctg
     2161 atctatgcgg gcgtggtccg cacgccggtg atggcgatgg cacgcgaagt tccattcaaa
     2221 gggcgcgcgc agaggatcgc ggccgaacgc tgcgccacga tggccgacgt atggcggctg
     2281 gtgggggagc tgccctacga tgccgatcct tatccgactc cggatctccg cgggaaaagc
     2341 gccaaggaga gcgcggcgcg gctcgcgcgc atgcttggcc gcgacctggg cgacgccgag
     2401 cttcccgatt ggatcgcggt tgcgagctat ctcgccgagc gtcagcttgc cgagatcgaa
     2461 gtagcagcga gcgcgctcat cttgcgtgaa gagctagggc cggaggcgcc ggtgattggc
     2521 gcgggctgcg ggcgcttcat ggcgagccgt gttgcgcaaa ggctcgggcg cgcctaccgg
     2581 gattttggcg acatgattaa ttgcgctcag gaagctcgtg aaatggctgc acgatcggct
     2641 ccagccgttg ccgtggcgct gcttgcggaa acactttctt gatgctttct aggccacgct
     2701 tcgatcgccc ttagaggcgt gaagaagaag cgaccatgga gcgtcatcat accttccttg
     2761 tcatgacggc tttcattggc tgcggcatcc tagtcggtgc agcggctcag agcgcagtcg
     2821 ctgcgccatt atctcaaatt gccgccaacg ctgccggtgc atcgctgggt cgagaccgtc
     2881 ggctattgga agcgctactg ccgctttaac gactgcaccg ggacgaatgt cgtggtggta
     2941 ccaactcccg ctgtgcctgc cgtccctgct cccgtcg
//
LOCUS       DATCWM010000277         2822 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_347777, whole genome shotgun sequence.
ACCESSION   DATCWM010000277 DATCWM010000000
VERSION     DATCWM010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2822
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_347777"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..192
                     /locus_tag="VIQ50_05320"
     CDS             <1..192
                     /locus_tag="VIQ50_05320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY9359832.1"
                     /translation="WQIVRERRATFAATPGENAKRPATTTAWRNLWLAGDWTRTGLPA
                     TIEGAIRSGNRAADLVGRS"
     gene            206..2167
                     /gene="shc"
                     /locus_tag="VIQ50_05325"
     CDS             206..2167
                     /gene="shc"
                     /locus_tag="VIQ50_05325"
                     /EC_number="5.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051007 - squalene-hopene cyclase activity
                     [Evidence IEA];
                     GO_process: GO:0019746 - hopanoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene--hopene cyclase"
                     /protein_id="HEY9359833.1"
                     /translation="MNHVLLEPKSSPSAVDDGIEAASDALIALQKPDGHWVFELEADA
                     TIPAEYILLRHYLAEPVDTVLEAKIAAYLRRIQGDHGGWPLSHDGAFDMSASVKAYFA
                     LKMIGEPVEAPHMVRARSAIRARGGASRSNVFTRMMLALFGFIPWRAVPVMPVEIVLL
                     PTWFPFHLDKVSYWSRTVIVPLLVLEALKPRARNPKGVSIEELFLEPPRAIGLAPKAP
                     QQSTMWFWFFRGVDTALRFCAPIFSKRLRQRAIERAVAWVTERLNGEDGLGAIFPAMA
                     NSVMMFDALGYPEHHPLRSIARKSIDKLLAVHEHEAYCQPCVSPIWDTALACHSLLEV
                     GGERAVAQARRGLEWLVPRQILDIKGDWIARRPDLSPGGWAFQYANPHYPDVDDTAVV
                     VMAMDRVQRPSAQRDFRLAIAAGREWILGMQSKNGAWGAFDADNEYYYLNNIPFADHG
                     ALLDPPTEDVTARCVSMLVQIDDCASKSAAVTRGIDYLRRIQTAEGSWYGRWGMNYIY
                     GTWSVLCALNAAGVDHASPEVRKAATWLIAIQNSDGGWGEDAASYKLDYRGHEAAPST
                     ASQTAWALLGLMAAGEAGHPSVKRGIDYLLRTQGEDGFWTEPRYTATGFPRVFYLRYH
                     GYSKFFPLWALARYRNLEKANTRSLPYGM"
     gene            complement(2218..>2822)
                     /gene="hpnH"
                     /locus_tag="VIQ50_05330"
     CDS             complement(2218..>2822)
                     /gene="hpnH"
                     /locus_tag="VIQ50_05330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006613860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="adenosyl-hopene transferase HpnH"
                     /protein_id="HEY9359834.1"
                     /translation="VAAFLDYAQELGVGVSISPGYAYERAPDQEHFLNRRKTKELFRK
                     VFRLGRGKKWNFVHSNLFLDFLAGNQTYRCTPWGMPTRNIFGWQKPCYLLGEGYAKTF
                     RELMESTDWASYGTGKYEKCANCMAHCGYEPTAAEATMSHPWQALKVAMFGPRTEGAM
                     APEISLEGQRPAEFVFSRHVEHELAAIREAQKRAPLEAVE"
BASE COUNT          487 a          872 c          924 g          539 t
ORIGIN      
        1 tggcagatcg tgcgcgagcg ccgcgcgacc tttgccgcga cgcccggcga gaatgccaag
       61 cggccggcga cgacgacggc gtggagaaat ctctggctcg ccggcgattg gaccaggacc
      121 ggtttgccgg cgaccatcga aggggcgatc cgatccggta accgggcggc tgatctcgtt
      181 ggtcgatcgt gatcgaggaa aggtcatgaa tcacgtcttg ctcgagccga aatcgtcccc
      241 gtccgccgtc gacgacggca tcgaggcggc gagtgacgcg ctcatcgctc tgcaaaagcc
      301 ggacgggcac tgggtcttcg aactggaagc ggacgcgacc attccggcgg agtacatctt
      361 gctgcgccac tacctggccg agccggtcga tacggtgctc gaggccaaga tcgccgccta
      421 cctgcgtcga atccagggcg accacggcgg ttggccgttg tcccacgacg gcgctttcga
      481 catgagcgcg agcgtcaagg cgtatttcgc cctcaagatg atcggcgagc ccgtcgaggc
      541 cccgcatatg gtgcgggcgc gcagcgccat ccgcgcgcga gggggcgcct ctcgctcgaa
      601 cgtgttcacg cgcatgatgc tggcgctttt cggattcatt ccctggcgcg ccgttccggt
      661 gatgccggtc gagatcgtgc tgttgccgac gtggtttcca ttccatctcg ataaggtttc
      721 ctactggagc cgcaccgtca tcgtgcctct cctggtgctg gaggcgctca agccgagagc
      781 gcgcaatccc aagggcgtca gcatcgagga gctgtttctc gagccaccgc gggcgatcgg
      841 tctcgcgccg aaggcgccgc agcagagcac gatgtggttt tggttcttcc gcggcgtcga
      901 taccgcgctg cgtttctgcg cgccgatatt ctcgaaacga ttgcggcaac gcgcaattga
      961 gcgagcagtc gcatgggtga cggagcgtct caacggcgaa gacggtctgg gcgcgatttt
     1021 cccggcgatg gcgaacagcg tgatgatgtt cgacgccctg ggctatccgg agcatcatcc
     1081 gttgcgctcg atcgcgcgca aatccatcga caagctcctc gccgtgcacg agcacgaggc
     1141 ctattgccag ccttgcgtgt cgccgatctg ggataccgcg ctcgcctgtc acagtttgct
     1201 cgaagtcggc ggcgagcgtg ccgttgcgca ggcccgccga gggctcgagt ggctggtgcc
     1261 gaggcaaatc ctcgacatta aaggtgattg gatcgcgcgg cggcctgacc tctcgcccgg
     1321 cggttgggcc ttccagtacg ccaatccgca ctatccggac gtcgacgaca ctgcggtggt
     1381 ggtgatggcg atggatcgcg tgcagcgccc gagcgcgcaa cgcgacttcc gtctcgccat
     1441 cgccgcggga cgggagtgga tcttgggcat gcaaagcaaa aacggcgcct ggggcgcgtt
     1501 cgacgccgac aacgaatact attatctcaa caacatcccg ttcgccgacc acggggctct
     1561 actcgatcca ccgacggagg acgtgaccgc gcgctgcgtc tcgatgctgg tgcagatcga
     1621 tgactgcgcg tcaaaaagcg ccgcggtgac ccggggcatc gactatttgc gccggataca
     1681 gacggcagaa ggaagttggt atggtcgttg gggaatgaat tatatctatg gcacgtggtc
     1741 ggtgctgtgt gctctcaatg cggccggtgt cgatcatgcc tcgcctgaag tccgcaaggc
     1801 cgcgacgtgg ctcatcgcga tccagaattc cgacggcggc tggggcgagg atgctgcgag
     1861 ctacaagctc gactatcgcg gccacgaagc ggcgccgagc accgcttcgc agacggcttg
     1921 ggcgctgctc ggattgatgg cggcgggaga ggccggccac ccttccgtca agcgtgggat
     1981 cgattacctg ttacgaaccc agggcgagga tggcttctgg accgagccgc gttataccgc
     2041 gaccggcttc ccgcgcgtgt tctacctgcg ttatcacggc tattcgaaat tcttcccgct
     2101 atgggcgctt gcgcgctatc gcaatctcga aaaggccaac acccgctcgc tgccctacgg
     2161 aatgtgacag cggccgattg ggctggacct tcgccggcga gctcgtcggt gtttgtttta
     2221 ttccacggcc tccagcggag cgcgcttctg agcctcgcga atggccgcga gctcgtgctc
     2281 gacatggcgc gagaacacga attcggccgg ccgctggccc tcgagcgaaa tttccggcgc
     2341 catcgctcct tcggtgcgcg ggccgaacat ggcgaccttg agcgcctgcc agggatgcga
     2401 catcgttgct tcggcggcgg tcggctcgta gccgcaatgc gccatgcagt tcgcacattt
     2461 ctcgtatttg ccggtgccgt aggacgccca gtccgtgctc tccatcaatt cacggaacgt
     2521 cttggcgtag ccttcgccca gcagatagca aggcttctgc cagccgaaaa tgttgcgcgt
     2581 cggcatgccc cacggcgtgc agcgataggt ctggttcccg gcgagaaaat cgaggaagag
     2641 gttcgagtgg acgaaattcc actttttgcc cctgcccagg cggaagactt tgcggaacag
     2701 ctccttggtc tttctgcggt tgaggaaatg ttcctggtcg ggggcgcgct catacgcata
     2761 gccaggcgag atcgacacgc cgacgccgag ctcctgggcg taatcgagga aggcggcgac
     2821 gt
//
LOCUS       DATCWM010000278         3029 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_88658, whole genome shotgun sequence.
ACCESSION   DATCWM010000278 DATCWM010000000
VERSION     DATCWM010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3029
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88658"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..426
                     /locus_tag="VIQ50_05335"
     CDS             <1..426
                     /locus_tag="VIQ50_05335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359835.1"
                     /translation="KIRDFVGLSENSWDFNAPDAIAGFGPLEMTDELRAQVARMLGGG
                     VAGEAPNPRPAQAPQETLPSPEGVAELADAAPKTIPADVGSSAATGEDEGSGTPEGFA
                     GSESLPHRNKTDVAAQPGAAEVDDNQLSAKRLHGGALPK"
     gene            522..1298
                     /locus_tag="VIQ50_05340"
     CDS             522..1298
                     /locus_tag="VIQ50_05340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cro/CI family transcriptional regulator"
                     /protein_id="HEY9359836.1"
                     /translation="MRDLGLEEAIRVAGGVGALAKKLGISQPSVSNWSRVPAERVLSV
                     EEATGVSRVTLRPDLYEHAGTAGDIDEVDAARAQEYALLSVLLARAPDAALLPRLATL
                     RGNASPLGLAHAALAEAAERASIELIEREYFDLFIGLGRGELLPYGSYYLTGFLHERP
                     LARLRAHLDKLGIERAEGQAEPEDHAAILCEIMSGLASRRFSAPAGSDREVFEQHLAP
                     WIGRFFADLEQAEAADFYRRVGALGRVFVQIETEAFALPA"
     gene            1370..1579
                     /locus_tag="VIQ50_05345"
     CDS             1370..1579
                     /locus_tag="VIQ50_05345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007592759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase"
                     /protein_id="HEY9359837.1"
                     /translation="MKRERKATLGRREFLRTLGAGATVAAASAAPLADDARADDESND
                     EKRKARYQANSREVQTFYRVNRYPS"
     gene            1590..>3029
                     /locus_tag="VIQ50_05350"
     CDS             1590..>3029
                     /locus_tag="VIQ50_05350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEY9359838.1"
                     /translation="MLIKRTERQARRGTLAAALPCQGEDALDRRGFLRRSGLFAGGLA
                     ALGTLPLGSVRKAKAGPPPPAGAQVTIRKNICTHCSVGCTVVGEVANGVWIGQEPGWD
                     SPINRGSHCAKGASVRELVHGDRRLKYPMKLVNGQWTRVSWDQAIDEIGAKLLAIREK
                     SGPESVYWLGSAKFSNEGAYLFRKFAAFWGTNNVDHQARICHSTTVAGVANTWGYGAM
                     TNSYNDIRNSKTIMIMGGNPAEAHPVSLQHLLEGKELNRANWISVDPRLTRTAAHATE
                     FVRVRPGTHIPTIYGMLWHIFQNGWEDKEFIKQRVYGMDEVRKEVDKWTPDEVERVTG
                     LPEAQVKRVAEIFAKQKPSTLIWAMGQTQFSVGTANVRASCILLLATGNVGNFGNGAN
                     IFRGHCNVQGATDLGLDIVTLPLYYGLVEGAWKHWCRVWEVDYDWMLSRFDSKQIMET
                     SGIPSTRWFDATLLPKDQVAQKDNLKAMLV"
BASE COUNT          558 a          983 c         1006 g          482 t
ORIGIN      
        1 aagatccgcg acttcgtcgg gctctccgaa aattcttggg acttcaatgc accggacgcg
       61 atcgcgggct tcggcccgct cgagatgacc gacgaactgc gcgcccaggt cgcgcgaatg
      121 ctggggggcg gcgttgccgg cgaggcgccc aacccacgcc ctgcgcaagc gccgcaggag
      181 acgcttcctt ctcccgaagg tgtcgccgaa ttggccgacg ctgcccctaa gaccataccg
      241 gcagacgtcg gcagtagcgc cgcgaccggg gaggacgagg gctccggaac gcccgagggg
      301 tttgctggct ccgagtcctt gccgcaccgc aacaagaccg atgttgcggc gcagcccggt
      361 gcagcagagg tcgatgacaa tcaattgagt gcaaaacgcc tgcacggggg cgccttaccc
      421 aaataggcgc agtgacccat agcctcaggc tgttgaccgg cgctcgcagc gggcagtacg
      481 ttcgtacgct cgaaccataa taaataagaa ctaaagcgcc catgagggac ctaggtctgg
      541 aggaagcgat ccgcgtcgcc ggcggggtcg gcgcgcttgc caaaaaactc ggcatttcgc
      601 agccctccgt ttcgaattgg tcgcgtgttc ccgcggaacg cgtactgtcg gtcgaagagg
      661 cgacaggcgt gagccgcgtc acgctgcggc ccgaccttta cgagcatgcc ggaacggcgg
      721 gcgacatcga cgaggtcgac gccgcccgcg cccaggaata tgcgctgctg tccgtcctgc
      781 tcgcacgcgc gcctgatgca gccctgctgc cgcgcctcgc cacattgcgc ggcaatgcga
      841 gcccgctcgg gctggcccac gctgcgcttg ccgaggcggc ggaacgcgcc agcatcgagc
      901 tcatcgagcg ggaatatttc gaccttttca tcgggctcgg ccgcggggag cttctgccgt
      961 acggctctta ctatctcacc ggattcctgc acgagcggcc actcgcgcgg ctgcgcgcgc
     1021 atctcgacaa gctcggcatc gaacgcgcgg aggggcaagc cgagcccgag gatcacgcgg
     1081 cgatcctgtg cgagatcatg tccgggttgg cgagccggcg cttttccgct cccgccggct
     1141 ctgaccgcga ggtgttcgag cagcatctgg cgccctggat cggtcgcttc tttgccgacc
     1201 tggaacaggc cgaggccgcg gatttctacc gccgcgtcgg agccctcggc cgggtgttcg
     1261 tgcagatcga aacggaagcc ttcgcgctgc cggcgtgagc agcgcaaccg catcgccggt
     1321 cgggttcgcc cggctggcgc aacagacgaa gactagagag gagacggcga tgaaacgaga
     1381 acgcaaagca acgctcggcc gtcgtgaatt cttgcgcacg ctgggcgcgg gtgccaccgt
     1441 cgcggcggcg agcgccgcac cgctggcaga tgacgcgcgc gccgatgacg agagcaacga
     1501 cgagaagcgc aaggcgcgct accaggcgaa ctcgcgggag gttcagacct tctatcgagt
     1561 caacaggtat ccgagctgag gaggcagccg tgctgatcaa aagaacggaa cgtcaggccc
     1621 gtcgcggcac gctcgccgcc gcgctgccat gccagggcga ggacgcgctc gatcgtcgcg
     1681 gtttcctgcg ccgctccggc ctgttcgccg gcggtctcgc cgcgctcggt acgctgccgc
     1741 ttggaagcgt gcgcaaagcg aaggccggtc cgccaccgcc cgccggcgcg caagtcacca
     1801 tccgcaagaa catctgtacg cattgctcgg tcggctgcac cgtcgtgggc gaagtcgcga
     1861 acggcgtgtg gatcggccag gagcccggct gggattcgcc gatcaatcgc ggctcgcatt
     1921 gcgccaaggg tgcctcggtg cgcgagctcg tgcacgggga ccggcggctg aaatatccga
     1981 tgaagctcgt caacggccaa tggacgcgcg tcagctggga tcaggcgatc gacgagatcg
     2041 gcgccaagct gctcgcgatc cgcgagaagt ccgggccgga atccgtctat tggctcggct
     2101 ccgcgaagtt ctccaacgaa ggagcttatc tcttccgcaa gttcgcggcg ttctggggca
     2161 cgaacaacgt cgaccatcag gcgcgcatct gccattcgac gacggtcgcc ggcgtggcca
     2221 acacgtgggg ctacggcgcg atgaccaata gctataacga catccgcaac tccaagacga
     2281 tcatgatcat gggcggcaat ccggcggaag cgcacccggt gtcgctgcag catctgctcg
     2341 aaggcaagga gctcaaccgc gcgaactgga tttccgtcga tccccgcctg acgcgcacgg
     2401 ccgcgcacgc gaccgaattt gtgcgcgtgc ggccgggcac ccacatcccg acgatctacg
     2461 ggatgctgtg gcacatcttc cagaacggct gggaggacaa ggaattcatc aagcagcgcg
     2521 tgtacggcat ggacgaggtc cgcaaggagg tcgacaagtg gacgcccgat gaagtcgagc
     2581 gcgtcaccgg cctgccggag gcgcaagtga agcgcgttgc cgagatcttc gccaagcaaa
     2641 agccctcaac cctgatctgg gcgatggggc agacgcagtt ctcggtcggt accgccaacg
     2701 tccgcgccag ttgcatcctg ctgctggcga ccggcaatgt cggcaacttc ggcaacggcg
     2761 ccaacatctt ccgcggtcat tgcaacgtgc agggtgcgac cgacctcggt ctcgatatcg
     2821 tgacgctgcc gctttattac ggcctggtag agggcgcgtg gaagcactgg tgccgcgtct
     2881 gggaggtcga ctacgactgg atgctgtccc gtttcgactc caagcagatc atggagacgt
     2941 ccggcattcc gtcgacgcgc tggttcgacg cgaccctgct gccgaaggac caggtcgcgc
     3001 agaaggacaa tctcaaggcg atgctggtg
//
LOCUS       DATCWM010000279         2563 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_23899, whole genome shotgun sequence.
ACCESSION   DATCWM010000279 DATCWM010000000
VERSION     DATCWM010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2563
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23899"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            96..395
                     /locus_tag="VIQ50_05355"
     CDS             96..395
                     /locus_tag="VIQ50_05355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020187911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY9359839.1"
                     /translation="MTAAATKTPRLTERQFARIARALAEPRRFEMLKEIGACAGPAAC
                     SALHKKHKVSAATLSHHLKELETAGLIEIVRQGKFANLLLNRGVLRAYLDRLAKI"
     gene            525..1274
                     /locus_tag="VIQ50_05360"
     CDS             525..1274
                     /locus_tag="VIQ50_05360"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013949384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEY9359840.1"
                     /translation="MSDLKGKVAIVTGASKGIGAGIAKNLAAAGAAVAVNYASSREGA
                     ERVVADIKVSGGKAIAVKGDVAKAADVRRLFEETRSAFGRVDVLVNNAGIYHFQPLED
                     ITEDEFHLQFNTNVLGTILAAKEAAKHFGPDGGSIINISSVASEQAVPTSTVYSATKG
                     AVDTLTRVLAAELGPRKIRVNAIAPGGVETEGTHAAGVIGSDFEKDMVARTALGRLGQ
                     PDDIARIAVFLASDAAAWVTGERLTASGGYH"
     gene            complement(1509..2336)
                     /locus_tag="VIQ50_05365"
     CDS             complement(1509..2336)
                     /locus_tag="VIQ50_05365"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEY9359841.1"
                     /translation="MNRQKTIFARLGWVFLVVCFQFCDATVEAQQGPDPRIADLVSTG
                     KLRVGIGLANLVSGVKDPATGELRGVAVDLGRALAARIKVEFQPIEYPRPGVVLEGAK
                     NNAWDVTFLVIDPARAADADFSAPYMESDFTLLVPGGSPIRNFADADQPGIHIGVPRG
                     DAVDLRLTRIVKKAELVRVDNQAAGADLLRTGQTQAYAAPRPALIEMSAHLSGTQVLD
                     DSFATISFAAFVPKGHHQHLAYVSEFLEEAKASRLIKTFIERAKLRGMRAAPPAKSN"
BASE COUNT          532 a          810 c          751 g          470 t
ORIGIN      
        1 tgctcaacct cggtaatggc gcgtatgact cttgcgcaac ccatcttacg aattcgccgc
       61 tggaacatcg gcgccgcagt gattaccttt cgactatgac tgccgccgcc acaaaaaccc
      121 cgcgccttac cgagcggcag ttcgcgcgca tcgcccgcgc gctcgccgag ccgcggcgct
      181 tcgagatgct caaggagatc ggcgcctgcg ccgggccggc cgcgtgcagc gcgctgcaca
      241 agaagcacaa ggtgagcgcc gcgacgctgt cccaccacct caaggaactc gagaccgcgg
      301 gcctgatcga aatcgtccgc cagggaaaat tcgccaatct ccttctcaac cgcggcgtgc
      361 tgcgcgcgta tctcgatcgt ttggcgaaaa tctgaccccc tttcctcccc cttgcagaac
      421 tgcggtccgc accatagttc gatgattgtc gaactatcga ggcgatggca aggcacgcgc
      481 ataatgcgcg ggccgatccg tacgcaacgg aacaggagca atctatgagc gatctcaaag
      541 ggaaagtagc gatcgtgacc ggcgcctcga agggcatcgg cgccggcatc gccaagaatc
      601 tcgccgcggc cggcgccgcg gtggcggtaa actatgcgtc aagccgcgag ggcgccgaac
      661 gcgtcgtcgc cgacatcaag gtcagtggcg gcaaggcgat tgcggtcaag ggcgacgtcg
      721 ccaaagcggc cgacgtccgc cggctgttcg aggagacgag atcagctttc ggccgcgtcg
      781 acgttctggt gaacaatgcc ggcatctatc acttccagcc gctcgaagac atcaccgagg
      841 acgaattcca cctgcagttc aacaccaacg tgctcggcac tatccttgcc gccaaggaag
      901 cggccaagca tttcggcccg gacggcggca gcatcatcaa catctcgtcg gtggccagcg
      961 agcaggcggt tccgacatcg acagtctact cggccaccaa gggtgcggtc gacacgctga
     1021 cgcgcgtgct cgccgccgag cttggcccgc gcaaaatccg cgtcaacgcc atcgcgccgg
     1081 gcggggtgga gaccgagggc acccacgccg ccggtgtcat cggcagcgat ttcgagaagg
     1141 acatggtggc gcgcaccgcg ctcggccggc tcggccagcc cgacgatatc gcccgcatcg
     1201 ccgtgtttct ggcctccgac gccgccgcct gggtcaccgg cgagcggctc accgcgtcgg
     1261 gcgggtatca ctgaaacgcg gcgagctgaa tagagcagcc attgcaaccc gtgcacgtcg
     1321 ttggtgcggt gcatgagtcc ggttatggca cctcgcgtca tttcgctgcg gtgccgaatt
     1381 tcggtcgcga tcggagcgaa gcggacatgc cgcgcgcgtc gggagcgcgt cgatccgacg
     1441 aaaatgaccc taagcggtca tcgcgtcgcc tagcgaacat ccccccttca atcgcatagc
     1501 ttgtccattc aatttgattt tgctggaggt gctgccctca tcccccgtaa tttagcacgc
     1561 tcgataaatg tcttgatcag tcgcgacgcc ttggcctctt ccaagaactc gctaacgtac
     1621 gccaaatgct ggtgatgtcc cttagggacg aacgctgcaa aggaaatagt cgcaaaggag
     1681 tcatctaaca cttgggtgcc agacaagtga gccgacattt ctattagcgc agggcgcggt
     1741 gccgcatagg cttgcgtctg accggtgcgg agcaaatccg ctcctgcagc ctggttgtcg
     1801 acgcgcacca attcagcttt cttcacgatg cgcgttagac gcaggtccac cgcgtctccg
     1861 cgcggaaccc cgatgtgaat tcccggctga tcagcatccg caaaattccg gatcggcgag
     1921 ccacccggca ctaaaagtgt gaagtcgctt tccatatacg gagccgagaa atcagcatca
     1981 gcagcccgcg cgggatcaat tactagaaac gtgacgtccc aggcgttgtt tttcgcgccc
     2041 tcaagcacta ccccaggtct gggatattca attggttgga attcaacttt gatccgcgct
     2101 gcaagtgcgc ggccaaggtc tacggccact cctcgtaatt ctccggtcgc tgggtcctta
     2161 acgcccgaga ctagatttgc caaaccgatt ccaacccgaa gttttccggt cgatacgagg
     2221 tccgcgatac gaggatcagg gccctgttgt gcctcgacag tggcgtcaca gaattgaaag
     2281 cacacgacaa gaaacaccca cccaagtcgg gcaaaaatgg tcttttgcct attcatgatt
     2341 gccccggagg aaatggagag aagctgacac gagcataccg gaccgcacga gtgggacaag
     2401 gcgtatgtcg ccttctggcg ctaagccgaa gtggttggat gtccgctttc gcgccgctgt
     2461 tggggaacaa gcggacatca ggtgcgccta ctccaggcgg ccgatttatg agtacacgac
     2521 ctagtccgga attggcacta agcggacatg tccagcgcac ccg
//
LOCUS       DATCWM010000280         3011 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_272243, whole genome shotgun sequence.
ACCESSION   DATCWM010000280 DATCWM010000000
VERSION     DATCWM010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3011
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_272243"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..666)
                     /gene="phnD"
                     /locus_tag="VIQ50_05370"
     CDS             complement(<1..666)
                     /gene="phnD"
                     /locus_tag="VIQ50_05370"
                     /inference="COORDINATES: protein motif:HMM:TIGR01098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0043168 - anion binding [Evidence IEA];
                     GO_function: GO:0043225 - ATPase-coupled inorganic anion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate/phosphite/phosphonate ABC transporter
                     substrate-binding protein"
                     /protein_id="HEY9359842.1"
                     /translation="MMRAFLRCAAAGLALGASGLGVGAQTPTEINFGVISTEASMNQK
                     KNWEPFLQEMSKATGFKVNGMYATDYAGVIEAMRFKKVQLAWFGNKSGMEAVDRANGE
                     VFARVVARDGSVGYYSHIIVHKDSPFAKLEDILKCDKSLDFGIGDPNSTSGFLVPTAY
                     IFAAHNIDPKTCFRTVRNANHQANAMAVANKQVAAATNNSEDLQRLRQSAASHPHTRS
                     QQEP"
     gene            complement(732..1631)
                     /gene="phnC"
                     /locus_tag="VIQ50_05375"
     CDS             complement(732..1631)
                     /gene="phnC"
                     /locus_tag="VIQ50_05375"
                     /EC_number="7.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013419176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015416 - ABC-type phosphonate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015716 - organic phosphonate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter ATP-binding protein"
                     /protein_id="HEY9359843.1"
                     /translation="MSNQAVIDVRRVSKSFERGTRVLDDVTFSVARREMVALIGASGS
                     GKSTLIRALAGLVPIDRAAAAAGGGGTIAMFGEPIQRDGRIVSGAKELRVRMGVIFQQ
                     FNLVPRLSVLTNVCLGLLGRMPFLRGTLNNFTMDEKRGAMHALDRVGMSKHALKRGSE
                     LSGGQQQRAAIARTLVQRAELLLADEPIASLDPASARRVMDILADMNRQDGITVLVSL
                     HQVEYALSYCPRAIALKAGKIVYDGPSDELTPTLLSSIYGAELSELFPSSLDRPASLW
                     QRPVAGQAAQTGLGSADSVRLRA"
     gene            complement(1780..2493)
                     /locus_tag="VIQ50_05380"
     CDS             complement(1780..2493)
                     /locus_tag="VIQ50_05380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1045 domain-containing protein"
                     /protein_id="HEY9359844.1"
                     /translation="MDEPRYAIYFVPPADSALYHFGAGFLGYDCYTGENLPHPQDVAL
                     AASEWDALTRDARKYGFHATLKAPFRLLPPFSEADLTAELERFAAIPRTLPEIKPIVQ
                     SLAGFIVVVADMPSMGLDRLAADAVMAFDRFRCPLSSHEREQRLSAGLSQRQTDNLDR
                     WGYPYVFDDFRFHMTLTGRIEAGRRGAILALLQARFDAIEGAHVLPVSQVALLRQERR
                     ASPFRMVREAALTALRPGQ"
     gene            complement(2516..>3011)
                     /locus_tag="VIQ50_05385"
     CDS             complement(2516..>3011)
                     /locus_tag="VIQ50_05385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9359845.1"
                     /translation="LLSHDDASPEQRRWFRALGCRLAEFPKTVETAQEAASQGDDIVL
                     GAPNVVRGGSHTGWIDATEMIERGLCSVLASDYYYPAPLLAAFALARRGVLPLARAWA
                     LVSQAPAKAMRLDDRGRMARGRRADLIVVDASLAGQQPHVVATIVAGRVVHLARADIV
                     VPVR"
BASE COUNT          535 a          943 c         1012 g          521 t
ORIGIN      
        1 aggctcttgt tggcttcgag tatgcggatg ggaagcagct gattgtcgga ggcgctgcag
       61 gtcctcgctg ttgttggtcg cggccgcgac ctgcttgttg gcaaccgcca tggcattcgc
      121 ctggtggttg gcgttgcgca cggtgcggaa gcacgtcttc gggtcgatat tgtgcgcggc
      181 gaagatatac gcggtgggca cgaggaagcc cgatgtcgag ttcgggtcgc cgatgccgaa
      241 gtcgagcgac ttgtcacact tgaggatgtc ctcgagtttg gcgaacggac tgtccttgtg
      301 cacgatgata tgggagtaat aaccgacgct tccgtcccgc gccacgaccc gggcgaagac
      361 ctcgccattg gcgcggtcga ccgcctccat gcccgacttg ttgccaaacc aagcgagttg
      421 gaccttcttg aagcgcatcg cttcgatgac gccggcatag tcggtggcgt acattccatt
      481 gaccttgaag ccggtcgcct tcgacatctc ctgcagaaac ggctcccaat tctttttctg
      541 gttcatcgag gcttcggtcg agatcacgcc gaaattgatt tccgtcggcg tctgcgcgcc
      601 cacgccaagg cccgatgcgc ctagcgccag gccggccgcc gcgcatctta gaaaagctcg
      661 catcatgaga ggtctcctgt cgtggtggga tgtatcgccg aaagcgggga agcgctcccc
      721 aatgtgttcg ctcacgcgcg caagcgaacg ctgtccgccg atccgagccc ggtttgcgcg
      781 gcttggcctg caaccggccg ctgccagaga gaggccggcc gatccaagct cgagggaaac
      841 agctcgctca gctctgcgcc gtagatgctg ctcagcagcg tcggcgtgag ttcgtcggag
      901 ggtccgtcgt agacgatctt gccggctttg agcgcgatcg cgcgcgggca gtagctcagc
      961 gcgtattcga cctgatgcag cgagacgagc acggtgatcc catcctgccg gttcatgtcg
     1021 gccagaatgt ccatgactcg acgcgcggat gcaggatcga gcgaagcgat cggctcatcc
     1081 gcgagcagga gctcggcgcg ctgcaccagg gtgcgggcga tggcggcgcg ctgctgttgg
     1141 ccgccggaaa gttccgagcc gcgtttgagg gcgtgcttgc tcatgccgac gcgatcgagc
     1201 gcgtgcatcg ctccgcgctt ttcgtccatg gtgaaattgt tgagcgttcc ccggaggaac
     1261 ggcatccggc cgagcagccc gaggcagacg ttggtgagga ccgacaaccg cggcacgaga
     1321 ttgaattgct ggaagatcac gcccatgcga acgcgcagtt ccttggcgcc gctgacaatt
     1381 cggccgtcgc gctggatcgg ctcaccgaac atggcaatcg tcccgccgcc ccccgccgcc
     1441 gcggcagccc ggtcgatcgg cacgaggccg gcgagcgcgc gaatgagcgt cgacttgccg
     1501 gagccggatg caccgatgag ggccaccatc tcgcgccggg cgaccgagaa ggtcacatcg
     1561 tcgagcacgc gggtgccccg ctcgaacgat ttcgacacac gccgcacatc gataacggct
     1621 tgattggaca cgccgattgc ctggaatttg cgcctatttt ccgcgagtta ggcctagcag
     1681 ccgcatatga cagcgggatg aaacgcggcg cggggcgcac ggcgagcgag gggttttgca
     1741 ccgcctgacc acagggcgat tgtgcgatgc ggtaaggccc tactgacctg gacgcagcgc
     1801 cgtcagcgcc gcctcacgga ccatgcggaa cgggctcgcg cgccgctcct ggcgcagcaa
     1861 ggctacttga ctgaccggca gcacatgcgc gccctcgatc gcgtcgaagc gcgcttgcag
     1921 caacgcaagg atcgcgcccc gacggccggc ctcgatccgg ccggtcaagg tcatgtgaaa
     1981 gcgaaagtcg tcgaagacgt aggggtagcc ccaccgatcg aggttgtcgg tctggcgttg
     2041 gctcagcccg gcgctaagcc gttgctcccg ttcgtgcgag ctcagcggac accggaaccg
     2101 gtcgaatgcc atcacggcgt ctgccgccaa acgatcgaga cccatgcttg gcatgtcggc
     2161 gacgacgaca atgaatcctg cgagcgattg gacgatcggt ttgatctcgg ggagcgttcg
     2221 cgggatggcg gcaaatcgtt cgagttcggc cgtcaaatcc gcttcgctga acggcggcag
     2281 caaacgaaac ggcgccttta gcgtggcgtg aaagccgtat ttgcgcgcgt cgcgcgtgag
     2341 cgcgtcccac tccgaggccg cgagcgcgac gtcttgcgga tgcgggaggt tctcgccggt
     2401 atagcagtca tagccgagga agccggcgcc gaagtggtag agggcggaat cggctggcgg
     2461 cacgaaatag atcgcatatc ttggctcgtc catgcgcttt cagaagaaca aacgctcacc
     2521 gcacggggac gacgatgtcc gcccgcgcga gatgcacgac gcgtccggcg acgatggtgg
     2581 cgacgacgtg cggctgctgc ccggcaagcg acgcatcgac gacgatcaag tccgcgcgcc
     2641 ggccacgcgc catgcgcccg cgatcgtcga gccgcatagc cttcgcgggc gcttgcgaca
     2701 ccagcgccca ggctcgagca agggggagga caccgcgtcg cgcgagcgca aaggcagcga
     2761 gcagcggtgc cggatagtag taatcggagg cgagcaccga gcaaagtccg cgttcgatca
     2821 tctcggtcgc gtcgatccat cccgtgtggc ttccgccgcg aacgacgttg ggggcgccga
     2881 gcacgatatc gtcgccttgg gatgcggcct cctgcgcggt ctcgaccgtc ttcgggaatt
     2941 ccgccaggcg gcagccgagc gcgcgaaacc agcgccgctg ttccgggctg gcgtcgtcat
     3001 gcgacagcaa c
//
LOCUS       DATCWM010000281         2667 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_488125, whole genome shotgun sequence.
ACCESSION   DATCWM010000281 DATCWM010000000
VERSION     DATCWM010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2667)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2667)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2667
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_488125"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(116..1834)
                     /locus_tag="VIQ50_05390"
     CDS             complement(116..1834)
                     /locus_tag="VIQ50_05390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9359846.1"
                     /translation="MHDIVIRGGTIIDGTGKPAFTGDLAIAGERLVEVGGKLGPARRE
                     IDASGLLVTPGWVDVHTHYDGQAIWDPLLGPSCWHGVTTAMFGNCGVGFAPVKPQHRA
                     ALMELMEGVEEIPGVVLTDGLTWEWETFPDFLDALERRPRAIDIAAQIAHHPLRVYVM
                     GDRAIRLEAARPEDIAEMRRLTIEALRAGAFGFTTSRTDSHKTPVGDMVPSRYAASEE
                     LLGIGAALGDVSAGAFGMNSDFDDEDDELAWLTRLAKETGRPVWFLLTDRYEDPERWR
                     RLLTAVHAARADGANLTAQIAGRPIGVMLGIGTALNPFSVRPSYRELDGLSIPEQRRR
                     LRDPALRRRILDEKPSAEEVSRLAQFRQLITTRWDKFFVMGDPPDYEPPDEASCAAIA
                     ARTGRTPDEVAYDYLTEAENRYLFFPVVNYVCGDHEPIREMLTDSATLLGLSDGGAHC
                     ASIVDAGVPTYMLLHWGRDRRRGPRLPIELLVRRQTSETADFFGLHDRGRLAPGLRAD
                     INLIDFEGLRLYQPELVNDLPAGGRRFVQRVDGYVATFLAGAPTFERGEHTCALPGRL
                     VRAGHA"
     gene            2043..>2667
                     /locus_tag="VIQ50_05395"
     CDS             2043..>2667
                     /locus_tag="VIQ50_05395"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY9359847.1"
                     /translation="MPKTPDYFVGKTIIITGAASGIGRAAAKIFAREGANVVCADING
                     DGANKTAGEIVAHGGKALALATDVASRRQVNDMVHRAIESFGPVQFQFNSAGAALRRS
                     KFLDIDDALFENTFALNVKGTLYCMQAVLPHMLENRHGVIVNMASMAHRRGGPGSSVH
                     YAAAKGAVVSMTLGVAREFAQAGIRCLSISPGPIRTPFQSAAQTSPEL"
BASE COUNT          464 a          895 c          883 g          425 t
ORIGIN      
        1 gcgccgctat agcgtgttct atcagccggc ggccgacggc cgcgcgagca cgctcaccgc
       61 gcggcttgcc cgcgttcccc agcactaagc gtcgcaagcc cgcagcacga ctgcgctacg
      121 cgtgccccgc acgcacgagc cggccgggca gcgcgcaggt atgttcgccg cgctcgaagg
      181 tcggcgcgcc ggccaagaac gtggcaacgt agccgtcgac ccgctgcacg aaccggcggc
      241 cgccggcggg aagatcgttg acgagctccg gctggtaaag ccgcagcccc tcgaaatcga
      301 tcaggttgat gtcggcgcgc aggcccggcg cgagccggcc gcggtcgtgc aagccgaaga
      361 aatccgccgt ttcgctggtc tgccgcctga ccaacagctc gatcggaagc cgcggcccac
      421 gccggcggtc gcggccccag tgcaacagca tgtaggtcgg cacgccggca tcgacgatcg
      481 aggcgcaatg cgcgccgccg tcgcttagtc ccaacagcgt cgccgagtcg gtcagcatct
      541 cgcgaatggg ttcgtggtcc ccgcagacgt agttcaccac cgggaaaaac aggtacctgt
      601 tctcggcttc ggtgagataa tcgtaagcga cctcgtccgg cgttcgtccc gtgcgagcgg
      661 cgatcgccgc gcagctcgcc tcgtccggcg gctcgtaatc cggtggatcg cccatcacga
      721 agaacttgtc ccaacgggtg gtgatgagct ggcggaattg tgcgagtcgg ctcacttcct
      781 cggcggaggg cttttcgtcg aggatccgcc gtcgcagcgc cgggtcgcgc aaacgccggc
      841 gttgctcggg gatgctcaga ccatcgagtt cgcggtagct cgggcgcacc gagaacggat
      901 taagcgcggt gccgatgccg agcatgacgc cgatcggccg gccggcgatc tgggcggtca
      961 agttcgcgcc gtcggcgcgc gccgcgtgca ccgccgtcaa cagccgccgc cagcgttccg
     1021 gatcctcgta gcggtcggtg agcaggaacc agaccgggcg gccggtctcc ttggccagcc
     1081 gcgtcaacca ggcaagctcg tcatcctcgt cgtcgaaatc gctgttcatc ccgaaggcgc
     1141 cggcgctgac atcgccgagc gcggcgccga tgccaaggag ctcttcgctt gcggcatagc
     1201 gtgacggcac catgtcgccg acgggagtct tgtgagagtc cgtgcgagag gtggtgaagc
     1261 cgaaggcacc cgcgcgcagc gcctcaatcg taagccggcg catttctgcg atgtcctcgg
     1321 gccgtgccgc ctcgaggcga atggcgcgat cgcccatgac atagacgcgc aacgggtgat
     1381 gcgcgatctg ggcggcgatg tcgatcgcgc gcggccggcg ctcgagcgcg tcgaggaagt
     1441 cgggaaaggt ctcccattcc cacgtcaatc cgtcggtcaa gacgacgccg gggatttctt
     1501 cgacgccttc catcagctcc atcagcgcgg cgcgatgctg cggcttgacc ggcgcgaagc
     1561 cgacaccgca attgccgaac atcgcggtgg tcacgccgtg ccagcacgat ggcccgagca
     1621 gcggatccca aatcgcctgc ccgtcataat gcgtgtgcac gtcgacccag ccgggcgtta
     1681 ccaacaggcc cgatgcatcg atctcgcgcc gagccgggcc aagtttgccg ccgacctcga
     1741 cgaggcgctc gcccgcgatc gccagatcgc cggtgaacgc aggcttgccg gtaccatcga
     1801 tgatggtgcc gccgcgaatg acgatgtcgt gcatcgttcg ctcctcgagc tgggaaagaa
     1861 gaatgatgcc ccttctgcaa gcgcgatgca atgcaagagg ctttgcgtag ccgggaccgc
     1921 agccatccga ttcggcacgt atctttcgcg cattcccgca gcgccaggac agtctatcat
     1981 tcccggtctg ggtcccgctt ttgcggggaa acgagcagag atttccttca aggagccagg
     2041 cgatgcccaa gacacccgat tacttcgtcg gcaagacgat catcatcacc ggcgcggcga
     2101 gcggcatcgg ccgcgccgcg gccaagatct tcgcgcgcga gggcgcaaac gtcgtgtgcg
     2161 cggacatcaa cggcgacggg gcaaataaga ccgccgggga gatcgtcgct catggcggca
     2221 aagcgctcgc gctggcgacc gacgtcgcat cgcgcaggca agtcaacgac atggtgcatc
     2281 gcgcgatcga gtcgttcgga ccggtgcaat ttcagttcaa ctcggcaggc gcggcgctgc
     2341 ggcgctcgaa gtttctcgac atcgacgacg cgttgttcga gaacacgttt gcactcaacg
     2401 tgaagggcac gctctattgc atgcaggccg tcctgccgca catgctcgag aaccggcacg
     2461 gcgtcatcgt caacatggcg agcatggcgc accggcgcgg cggcccgggc tcgtcggtgc
     2521 attacgcggc ggcgaagggc gcggtcgtat cgatgacgct cggggtggcg cgcgaattcg
     2581 cacaagccgg cattcgatgt ctctcgattt cgcccgggcc gatccgcacc ccgttccaga
     2641 gcgcggcgca aacctcgccc gaactga
//
LOCUS       DATCWM010000282         2996 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_288513, whole genome shotgun sequence.
ACCESSION   DATCWM010000282 DATCWM010000000
VERSION     DATCWM010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2996)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2996)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2996
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_288513"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1107
                     /locus_tag="VIQ50_05400"
     CDS             <1..1107
                     /locus_tag="VIQ50_05400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017264449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY9359848.1"
                     /translation="MDKARAASPEFRDIDRTRDDLAAFLYTSGTTGRSKGAMLSHGNL
                     ASNAEVLREVWRFTPADRLLHALPIFHTHGLFVATNVTLMAGASLIFLPSFNADEIIR
                     LLPEATVMMGVPTFYTRLLARKDFTQDLVKHMRLFVSGSAPLSAETHMEFETRTGHAI
                     LERYGMTETNMNTSNPYDGDRIPGSVGFPLPGVEIRIADPETGRVLPQGEVGGIEIRG
                     PNVFKGYWRMPEKTKEEFRPDGFFVSGDLGRIDERGYIAIVGRAKDLIISGGFNVYPA
                     EVEAIIEAVPGVAECAVIGVPHADFGEAVVAVVTAKAGAALEEKTIQAALANELAKFK
                     QPKKVFVTTELPRNAMGKVQKKDLRAQHAKTFTT"
     gene            1275..1724
                     /gene="madL"
                     /locus_tag="VIQ50_05405"
     CDS             1275..1724
                     /gene="madL"
                     /locus_tag="VIQ50_05405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012592170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005342 - organic acid transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015849 - organic acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malonate transporter subunit MadL"
                     /protein_id="HEY9359849.1"
                     /translation="MTIFGVALLAFCTLVGVFVGDLLGIVLGVKANVGGVGLAMMLLM
                     AARVWLIKKGGLSHGIKLGVEFWATMYIPIVVAMAAQQNVVAAVRGGPIVLIAGLGAV
                     SVCFAAVALIGHIGRDRQHEIEAEPDVERGGHVIAGELEPELIGKKA"
     gene            1729..2493
                     /gene="madM"
                     /locus_tag="VIQ50_05410"
     CDS             1729..2493
                     /gene="madM"
                     /locus_tag="VIQ50_05410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019903722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005342 - organic acid transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015849 - organic acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malonate transporter subunit MadM"
                     /protein_id="HEY9359850.1"
                     /translation="MLHMIEHVFVEQSLVAAFAVVGAVMWISLLMSKRLSAGRIHGSA
                     IAIVIGLVLAYVGGLVTGGQKGLADIPVFAGIGLMGGAMLRDFAIVATAFEVDVIEAR
                     KAGMLGVLALALGTILPFIVGAAVAMAFGYTDAISITTIGAGAITYIVGPVTGAALGA
                     DSTVVALSIATGVFKAVLVMVGTPLVARFIGLDNPRSAMAFGGLMGTVSGVAGGLAAT
                     DPKLVPYGALTATFHTGIGCLVGPSLLYLAVRAMVG"
BASE COUNT          556 a          945 c          927 g          568 t
ORIGIN      
        1 atggacaaag cccgtgcggc gtcgccggag ttccgcgata tcgatcgcac gcgcgacgat
       61 ctcgctgcct ttctctacac gtcgggaacg accggccgct ccaaaggcgc catgctgagc
      121 cacgggaacc tggcatcgaa tgccgaggtc ctgcgggaag tctggcggtt cactccggcg
      181 gaccggcttc tgcacgcgct gccgatcttc cacacccacg gcctgttcgt ggcgaccaat
      241 gtgacgctca tggccggcgc ctcgctcatc ttcctgccga gtttcaacgc cgacgaaatc
      301 atccggctcc tgcccgaggc gacggtgatg atgggcgtgc cgaccttcta tacgcgcctt
      361 ctggcacgca aggactttac gcaggacctc gtcaagcaca tgcgcctgtt cgtttcgggt
      421 tcggctccgc tttcggccga aacccacatg gagttcgaga cacgcaccgg tcacgccatc
      481 ctcgaacgct atggaatgac cgaaaccaac atgaacacct ccaatcccta tgacggggac
      541 cgcatccccg gcagcgtcgg atttcccctg ccgggggtcg aaatccgcat cgccgaccct
      601 gagaccgggc gtgtcctgcc gcagggagaa gtaggcggca tcgagatccg cggtcccaac
      661 gtgttcaagg gttactggcg gatgccggaa aagacgaagg aggaattccg gccggacggt
      721 ttcttcgtgt cgggcgatct cggccgcatc gacgagcgtg gttacatcgc catcgtgggg
      781 cgagccaagg acctgatcat ctcgggtggc ttcaacgtct atccggccga ggtcgaggca
      841 atcattgaag ccgtgccggg cgttgcggaa tgtgcggtca tcggcgtgcc gcacgccgat
      901 ttcggtgaag ccgtggtcgc cgtcgtcaca gccaaggcgg gagcagcgct cgaggaaaag
      961 acaatacagg cagctcttgc caacgaattg gccaagttca agcagccgaa gaaggtcttc
     1021 gtcacgaccg aactgccgcg caatgccatg ggcaaggttc agaagaaaga tctccgcgct
     1081 cagcacgcca aaaccttcac cacttagctg ccgatcggat cggccccacg tccgtatcac
     1141 agtaaataag ggccgatctg catcacataa cagaagcgtt cgaaacaact cgacgcacat
     1201 cacggaggat tcgccatgca tcgtttctcg cgaggcgcct gcgcgcgccc aaattgcttc
     1261 aggagggctt cgacatgacc atctttggcg ttgctcttct ggcgttctgc acgctggtcg
     1321 gcgtcttcgt cggcgatctg ctggggatcg ttctcggcgt gaaggccaat gtcggcggcg
     1381 tcggcctggc gatgatgctg ctcatggcgg cgcgggtctg gctcatcaag aaagggggcc
     1441 tgtcgcacgg gatcaaactg ggggtcgagt tctgggccac catgtacatc cctatcgtgg
     1501 tcgccatggc agcccaacag aatgtcgtcg cggcagttcg cggcggcccg atcgtcctca
     1561 tcgcgggcct gggcgcagtc tctgtctgct tcgccgcggt agcgctgatc ggccatatcg
     1621 gccgcgaccg ccaacacgag atcgaagccg agcccgacgt cgagcgcggc ggccatgtca
     1681 tcgcgggcga gttggagccc gaactcatcg gaaagaaggc gtaatcccat gctgcacatg
     1741 atcgaacacg tcttcgtcga gcaaagcctg gtcgccgcct tcgccgtcgt cggcgcggta
     1801 atgtggattt cgcttctgat gtcgaaacgg ctatcggccg ggcggattca cggctcggcg
     1861 atcgccatcg tcatcgggct ggtccttgcc tatgtcggcg gactggtgac gggcggacag
     1921 aaaggcctcg ccgatatccc ggttttcgcg ggcatcggcc tgatgggagg cgccatgctg
     1981 cgcgacttcg ccatcgtcgc caccgccttc gaggtggatg tcatcgaagc gcgcaaggcg
     2041 ggcatgctcg gggtcctcgc cctagcgctg ggcacgatcc tgccgttcat cgtcggggcc
     2101 gccgtcgcca tggcctttgg atacaccgat gcgatcagca ttaccaccat cggcgccggc
     2161 gcgatcacct acatcgtcgg tcccgtcacc ggagctgcgc tcggagcgga ctccacggtc
     2221 gtcgcgctgt ccatcgccac gggtgtgttc aaggcggtgc tcgtcatggt tggcacgccg
     2281 ctcgtcgccc gcttcatcgg tctcgacaac ccccgttccg ccatggcctt cggcggtttg
     2341 atgggcaccg tgagcggggt tgcgggcgga cttgctgcaa ccgacccgaa gctggtgccg
     2401 tatggcgccc tcaccgcgac cttccacacc ggcattggct gcctggtcgg gccgtccctg
     2461 ctctacctgg cggttcgtgc catggtcggg tgacgtctcg aacgtcgatg acgcagtgcc
     2521 gacagtgcgg gtccgatcgc aaagtctgcg agcggatccg ctttgtcgta ggtcatggca
     2581 aaggggcggc ccgtagcgac gacggcagga tccctcctct agaagaatcc catcagacta
     2641 aatcataacc tgctgcggcg aagaaattgg tgcattcccg ggccggttgc gccctacgtg
     2701 ccggtcgcac cggtccagaa ctgacgcggc atcacacgct tcgatcgaag caatcacacc
     2761 tgctgtgaga aggattggcg gcgcgcgcac tggacgttga gcaatcgcac tggtggcctc
     2821 cgacttggat ccggccaaat gtccgagatg gctcaaactc aaaagaaatc agtccgagta
     2881 aatgtcttcc gggttacccc cgaaagcaga catcactcga tgcagtcggg atgtgtcaaa
     2941 cgtgccaata agggaagtca taccagcctt cagaagagct gaccgatgat ggccca
//
LOCUS       DATCWM010000283         4489 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_148068, whole genome shotgun sequence.
ACCESSION   DATCWM010000283 DATCWM010000000
VERSION     DATCWM010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4489)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4489)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4489
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148068"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            92..688
                     /locus_tag="VIQ50_05415"
     CDS             92..688
                     /locus_tag="VIQ50_05415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359851.1"
                     /translation="MRDLLRTSTLALAFVGGVGLATAQQQPPPADAQQRLQLENWQHT
                     PSGKMGAEEPSAHAPGTQPQQNAAFVNGALAVPDAPANTDTMPAKFSQKNAADDALIT
                     VAYTFKSLTDDERRAIYQTLKDQSAPSAFNADVGTELPPEIELRPVPDDLAARVPQSR
                     DYRYAVTHDRVLLVGTSRIVAGVFAGANTPVSEGRRGP"
     gene            complement(798..1184)
                     /locus_tag="VIQ50_05420"
     CDS             complement(798..1184)
                     /locus_tag="VIQ50_05420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY9359852.1"
                     /translation="MTKVLYVEDNEDNVYMLKMRLELLEDFEVLTAEDGENGCAMALS
                     ERPDIILMDLEMPRVDGWEATRRLKDDPRTRDIPIIALSAHALAGEREKALAAGCDEF
                     DTKPIEFERLVATLRRVLAARGGRKP"
     gene            complement(1181..>4489)
                     /locus_tag="VIQ50_05425"
     CDS             complement(1181..>4489)
                     /locus_tag="VIQ50_05425"
                     /inference="COORDINATES: protein motif:HMM:NF024883.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEY9359853.1"
                     /translation="GGFRTMLGVPLLRDGSPIGVLALTRSQIQPFSDSEIALVRTFAD
                     QALIAIENVRLFDEVHARTRDLSGALEQQTATSEVLRIISSSPGDLQPVFEAILSNAT
                     RLCGANFGTLYLCDGDAFRAAAFHNAPAAFIEARKNKLLRPGPDTTLGDAARTKRVAQ
                     VLDSMNREPYRQRDPFVVAGAELGGYRTIVSVPMLKEDTLLGVISIYRQEVRAFTDKE
                     IALVLNFADQAVIAIENTRLLKELRQRTGDLTEALEQQTATSEVLRVISSSPGELAAV
                     FQAMLDNAVRICEAKIGILFRYENGAYTAVATLGVTAAYAEYLNRGPIRPGPTTGLGR
                     VASTKQTIHIVDTQVEQAYADREPFRVATADLGGARSLLNVPMLKEGELIGSIGIYRQ
                     EVRPFSDKQIELITNFANQAVIAIENTRLLNELRESLKQQTATADVLKVISRSTFDLQ
                     SVLRTLVESAARLCEADSATITRQKDGVFYRAEAYGFSPEFIEYVKNVPVVPERGSIT
                     ARALLEGKVIHVADVLADPDYTFTEAQKLGRFRTLLGVPMLRQGVPIGVLALTRSEVR
                     PFTDKQIELVSTFADQAAIAIENVRLFDEIQEKSWQLEQASRHKSQFLASMSHELRTP
                     LNAIIGLTEMMVSNAPRFGTEKAAEPLRRVHRAGTHLLGLINQVLDLSKIEAGKLELN
                     PTLVDLATLVDEIVGTARQLAEQNKNRLMVEAHDDLGSLMVDPMRLQQILLNLLSNAC
                     KFTQAGEVALRIRKLVDEQRWIEFAVADTGIGMTAEQQAKLFEEFSQAESSTAQRYGG
                     TGLGLAITRKLARMMGGDVTVNSEPGKGSVFTVRLPGDEATGPTQESRAQGSDCVLVV
                     DDDATARELIAEHLKAEGLPVVTAASGLEGLKLAKHLRPIAITLDVMMPDLDGWSVLA
                     ALRQDTELADIPVIMVTILDEQRRAASLGAAGYLTKPIDRDRLRRIMGRFRTPARATR
                     VLLVEDDADQRERLRAWLEGQHWLVEEAANGREALACLQADRPDVILLDLMMPEMDGF
                     AVVAALQKEPRWRDVPVIVITARDLDAQDRARLNSGVQSVLVKEAFRPAELVERIRRL
                     ASRPQLSSGMDATP"
BASE COUNT          796 a         1461 c         1378 g          854 t
ORIGIN      
        1 cgccgcaact gcgcgggaaa agcatggagt tgtgcttttc tcagcgcatg cagcggcgga
       61 tagatcatgt tcgtcagaac aggagcccac catgcgcgac ctcttgcgca ctagtacgct
      121 cgcgctggca tttgtcggcg gcgtcggact tgctaccgcc cagcagcagc ctccgccagc
      181 cgacgcgcaa caacgcttgc agcttgaaaa ctggcagcac accccgtctg gcaagatggg
      241 cgcggaagag ccgagcgcgc acgccccggg gacgcagccg cagcagaatg ccgcgttcgt
      301 caacggcgct ctggcggttc ccgatgcgcc cgcgaatacc gataccatgc ccgcgaaatt
      361 ctcgcagaag aacgcggccg atgacgccct catcaccgtt gcctacacat tcaaatcgct
      421 caccgatgac gagcgccgcg ccatctatca aacgctcaag gatcaatcgg ccccctccgc
      481 cttcaacgcc gacgtcggca ccgagctgcc gccggagatc gagttgcgcc cggtgcccga
      541 tgaccttgca gcgcgcgtgc cgcaaagcag ggattaccgt tatgcggtga cgcacgatcg
      601 cgtgctgctg gtgggcacca gccggattgt ggccggcgtg tttgccggcg ccaacacgcc
      661 ggtgagcgaa gggcgccgcg gcccttaaag cgtcggcgcg cttctccacc ccggcctgcc
      721 gctcataggc gatagggctc ctacgcaaac ttttcccccg cttgcgcctt tacggctcgc
      781 gcaagggtcg ccgcgggtca cggttttcta ccccctcgcg cggccaacac gcggcgcaaa
      841 gtcgccacca gccgctcgaa ttcgatcggt ttggtgtcga actcgtcgca tccggcggcc
      901 agcgcctttt cccgctcacc ggcaagtgcg tgtgcggaaa gcgcgatgat cgggatgtcg
      961 cgcgttcgcg gatcatcctt gagccgccgc gtcgcctccc agccatcgac ccggggcatc
     1021 tcgaggtcca tcaatatgat gtccggcctc tcgctcaggg ccatggcgca gccgttctcg
     1081 ccgtcctcgg cggtcagaac ttcgaaatcc tccaggagct ccagacgcat cttgagcatg
     1141 tagacgttgt cttcgttgtc ctcgacgtag agcaccttgg tcacggcgtt gcatccatcc
     1201 cgctgctgag ttgaggcctg ctggccagcc ggcggattcg ttcgaccagc tccgcgggcc
     1261 ggaacgcctc cttgaccagc accgactgca cacccgagtt caagcgcgcg cggtcctgcg
     1321 catcaaggtc gcgcgcggta atgacgatga ctggaacgtc gcgccagcgc ggctccttct
     1381 gtagtgcggc gacaaccgca aacccgtcca tctcgggcat catcaaatcg agcaagatca
     1441 catccggcct gtccgcctgc aggcacgcca gcgcctcacg cccgttcgcc gcctcctcca
     1501 ccaaccaatg ttggccctcg agccacgcac gcaggcgctc gcgctggtcc gcatcgtctt
     1561 ccaccagcag gactcgcgtc gcccgcgccg gcgtccggaa acggcccatg atccggcgca
     1621 gccgatcgcg gtcgatgggt ttggtgagat atcccgccgc accgagcgag gcagcgcggc
     1681 gctgctcgtc aagaatggtc accatgatca ccgggatgtc ggcaagctcg gtgtcttgcc
     1741 gtagcgccgc caacaccgac cagccatcga ggtcaggcat cataacgtcg agcgtaatcg
     1801 cgatcggccg caggtgcttt gcgagtttga gcccctccaa tccgctggcg gcggtgacca
     1861 ccggcagccc ttccgctttg aggtgttcgg cgatgagttc gcgcgcggtg gcgtcgtcgt
     1921 ccacgacgag cacgcaatcg ctgccttgag ctcggctctc ttgggttggg cctgtagcct
     1981 cgtcgccggg caggcgcacg gtgaacacag agcccttgcc cggctcgctg ttcacggtca
     2041 cgtcgcctcc catcatgcgc gcaagcttgc gcgtgatggc gagcccaaga ccggtgccgc
     2101 cgtagcgctg ggcggtcgac gactcggcct gggaaaattc ctcgaatagc tttgcctgct
     2161 gctcagccgt catgccgatg ccggtatcgg ctaccgcgaa ctcgatccac ctctgttcgt
     2221 cgacgagctt gcgtatccga agggccacct cgcccgcttg ggtgaacttg caggcgttgc
     2281 tgaggagatt gagcaggatc tgctgcagcc gcatcggatc aaccatcagc gagccgagat
     2341 cgtcgtgcgc ctccaccatc agccgattct tgttctgctc ggccagctgt cgcgcggtgc
     2401 cgacgatctc atcaaccagc gtcgccaaat cgactaacgt gggatttagt tcgagcttgc
     2461 cggcttcgat cttcgagagg tcgagcacct ggttgatgag accgaggaga tgcgtgccgg
     2521 cgcgatgcac gcggcgcagc ggctcggccg ccttctccgt cccaaagcgt ggcgcattgc
     2581 tgaccatcat ctcggtcaag ccgatgattg cgttgagcgg ggtgcgcagc tcgtggctca
     2641 tgctggcgag gaactgcgac ttgtgccggc tggcctgctc aagttgccag ctcttctcct
     2701 gaatctcgtc gaacaggcgc acgttttcga tagcaatggc cgcttggtcg gcgaatgtcg
     2761 acaccagctc gatctgcttg tcggtaaatg gccgcacttc cgaacgcgtt agtgcgagca
     2821 cgccgatcgg cacgccctgg cgcagcatgg gaacgcccag aagggtgcgg aagcgcccaa
     2881 gcttctgagc ctctgtgaaa gtgtagtccg ggtcggcaag tacgtcggcc acgtggatga
     2941 ccttgccttc caacagtgcg cgtgcggtga tcgagccgcg ctcgggaaca acaggcacat
     3001 tcttcacgta ctcgatgaat tccggcgaaa acccataagc ctccgcgcga tagaacactc
     3061 catccttctg ccgagtgatc gtggcactgt cggcctcgca aagccgcgca gccgattcga
     3121 cgagggttcg cagcacgctc tgcagatcaa aggtagagcg gctgatgacc ttgagcacat
     3181 cggcggtggc ggtctgctgt tttagggatt cacgcagttc gttgagcaac cgcgtgttct
     3241 cgatggcgat cacggcctgg ttggcgaagt tggtaatcag ctcgatctgc ttgtcgctga
     3301 acggccgaac ctcttgccgg tagatgccga tcgagccgat cagctctcct tccttgagca
     3361 tgggaacatt gagaagactt cgcgcgccgc caaggtcggc ggtcgccacg cgaaacggtt
     3421 cgcgatcggc ataggcctgc tccacttggg tatctacgat atgaatggtt tgcttggtgc
     3481 tggcgacacg acccaagccg gtcgtggggc ctggccggat cggtccacga ttaagatatt
     3541 ccgcatatgc cgcggtgacc ccaagcgttg caacggcggt gtatgcgcca ttctcgtacc
     3601 ggaacagaat tccgatcttg gcctcacaga tgcgcaccgc gttgtccagc attgcctgga
     3661 ataccgccgc gagttcgccg ggcgagctcg atatgacgcg caagacttcc gaggtcgcgg
     3721 tctgctgctc cagcgcctcg gtgagatcgc cggtgcgttg gcgcagttct ttgagcaacc
     3781 gcgtgttctc gatagcgatc acggcttggt cggcgaagtt caaaaccagc gcgatctcct
     3841 tgtcagtgaa tgctcgaact tcctgacgat agatgctgat cacaccgagt agcgtgtcct
     3901 ccttgagcat gggaaccgaa acaattgttc ggtatccgcc gagttccgcg ccggcgacca
     3961 cgaacgggtc ccgctggcgg tagggttcgc gattcatact atcgagcacc tgagcgaccc
     4021 gtttcgtccg cgccgcatcg ccgagggtgg tgtcgggtcc gggacgcagc agcttattct
     4081 tgcgcgcctc gatgaacgcg gcaggcgcgt tgtgaaatgc cgcggcgcgg aatgcatctc
     4141 cgtcgcacag atagagcgta ccgaagttcg ccccgcacag acgggttgca tttgatagta
     4201 tggcctcaaa cacgggctgc aaatcgcccg gcgagctgga aatgatgcgc agcacctccg
     4261 aggttgcggt ctgctgctcg agcgccccgg agagatcgcg cgtgcgcgcg tgcacctcat
     4321 cgaacagccg aacgttctcg atggcgatca gcgcctgatc ggcgaaggtc ctgacaagcg
     4381 cgatctcgct gtcgctgaac ggctgaatct gggaacgggt gagcgccagc acgccgatcg
     4441 ggctgccgtc gcgcagcagc ggtacgccga gcatggtacg gaagccgcc
//
LOCUS       DATCWM010000284         6960 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_18474, whole genome shotgun sequence.
ACCESSION   DATCWM010000284 DATCWM010000000
VERSION     DATCWM010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6960
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18474"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(142..3657)
                     /gene="mfd"
                     /locus_tag="VIQ50_05430"
     CDS             complement(142..3657)
                     /gene="mfd"
                     /locus_tag="VIQ50_05430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003690 - double-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HEY9359854.1"
                     /translation="MSAVSNPAELLRPGRPLTLASVTDGAEGLVLADLARAVAARGRA
                     TATSLVIVCRDGPRMAALARALDFFAPDLAVQEFPAWDCLPYDRVSPHPGFLAQRMTA
                     LSRLARATDAVRPSVLLTTVNAALQRVPARDFVARQCLSVAPGQVLAMDDITQWLELN
                     GFMRASTVREPGDYAVRGGIIDLYAPGMAEPVRLDFFGNTLETIRSFDPESQRTTDQL
                     RALDLVPVAEFQLTSETIRRFRLGYVAAFGAPAPDDVLYHAVSEGRRHPGVEHWLPLF
                     HDHLETLFDYATDCPVVLEPLAEDAARERLRQIEDYYEARRQALTQRDSGPPYHPLPP
                     GRLYLSESEWGARFEAAALARLTPFAVPEGQGSAIDAGTKQGRNFAAERAEPGRNVFE
                     AVSRHVGALKAAGKRVVIALWSVGARERMGHVLADHALAELAAVDSWPQALALPQSQV
                     ALAVLGLESGFETAQTAVISEQDILGDRLVRPRRAARRTENFIAEVTSLAAGDLVVHV
                     DHGIGRFIGLRAIEAAGAPHDCLEIHYAGGDKLFLPVENVELLSRYGAEETRVELDRL
                     GGGAWQARKARMKRRIRDIADALIKIAAERQLREAPRLTGEPGPYDEFCAGFPYEETE
                     DQQTAIDVVLDELASGRPMDRLICGDVGFGKTEVALRAAFVAAMNGRQVAVVVPTTLL
                     ARQHAHTFTERFRGFPVQIAQASRLISSSELARVKKKIADGSVDIVIGTHALLGKAIK
                     FRDLGLLIVDEEQHFGVAHKERLKQLRAEVHVITLTATPIPRTLQLALSGVRDLSIIA
                     SPPVDRLAVRTFVAPFDPVIVREALLRERYRGGQSFYVCPRIEDLAGAKDFLDKHVPE
                     VRVAVAHGQMPATVLEDIMSAFYDGKYDLLLSTTIIESGLDIPTANTLIVHRADRFGL
                     SQLYQLRGRVGRSKLRAYSLFTLPAADKITPQAERRLKVLQSLDTLGAGFQLASHDLD
                     IRGAGNLLGEEQSGHIKEVGFELYQQMLEEAVTSLKAGISAPVADKWSPQITVGTPVM
                     IPEDYVADLPVRLALYRRLAEIEDERDIEAFGAELVDRFGPLPVEVEHLLQIVAIKSL
                     CRQANVEKIETGPKGAVVSFRDNTFANPDRLVAFIRELGPAARVRPDMKVVFFDDWEN
                     PDARLRGTAIILRNLVTLAQPAKAA"
     gene            complement(3654..3947)
                     /locus_tag="VIQ50_05435"
     CDS             complement(3654..3947)
                     /locus_tag="VIQ50_05435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018263478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HEY9359855.1"
                     /translation="MTGTTRSSDGLDARRRKVLFRAWHRGMRETDLIMGRFADASIEQ
                     LTTPELTDFEQLMDVPDRELLAWITGEADVPPNYDTALFRRLRDFNRRGGGAR"
     gene            4085..6184
                     /gene="recG"
                     /locus_tag="VIQ50_05440"
     CDS             4085..6184
                     /gene="recG"
                     /locus_tag="VIQ50_05440"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008129563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HEY9359856.1"
                     /translation="MRPSLLNPLFAAITTLPGIGSRLEKLYRRLFGRDEPARVLDLLF
                     HLPTGAIDRRARPKLKDTVPDTVVTVAVNVDRHRPPPPHRPRAPYQIYTSDETGDLTL
                     TYFNARRDYLQKLLPVGERRYVSGIVELYDQMRQMVHPDRVVAEADLAKLPLVEPVYP
                     LTEGLSLNQVRKAADASLARLPDLPEWQETSWVARERFPSFADALRLLHRPAEPADLR
                     PEGLAWTRLAYDEFLAGQMALALVRAHLRRPAGRATLGTGHIRKKLIESLPYSLTPSQ
                     GRAIAEIVADLAKPERMLRLLQGDVGSGKTVVALLAAAAVIEGGRQTALMAPTELLAR
                     QHFNTTAPLAAAAAINVAILTGRERGRERNAILEKLAFGEIHVLIGTHALFQEQVEFR
                     DLALAVVDEQHRFGVHQRLALAKKGEAVDVLVMTATPIPRTLVLTYFGDMDVSELREK
                     PAGRQPIDTRTLALGRLEEVIGAVGRALAEGRRVYWVCPLVEVTENADFAAAEERFAA
                     LKERFGAMVDLVHGRMKGDAKDRAMARFAGGETRLLVATTVIEVGVDVPEATVMVIEH
                     AERFGLAQLHQLRGRIGRGGERSTCLLLYKAPLGETAKARLNILRETEDGFRIAEEDL
                     RLRGEGDVLGTRQSGVPGFRVARVETHGKLIGAARDDAALALSRDPTLASARGQALRH
                     LLYLFERDEAIRLIRAG"
     gene            complement(6221..>6960)
                     /locus_tag="VIQ50_05445"
     CDS             complement(6221..>6960)
                     /locus_tag="VIQ50_05445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HEY9359857.1"
                     /translation="AAPPEPAKVGRLQHGVVSRLRNYFLTGLILVAPAYITIALTWWF
                     INWVDDLVRPFIPIAYRPETYLPVTIPGTGLIIAFVTLTLFGFLTANFVGRKLVEIGE
                     NILTRMPIVRPIYNSLKQIFQTLFGKGGSSFRRVGLVEFPSPGMWSLVFLSNPASPEI
                     ATRLPDTEHVAAFMPCTPNPTTGFFFYVARRDIIDLDITVEAAMTLLMSAGMVQPGDQ
                     QRRLAALAETARSARAVQANHSAAPAK"
BASE COUNT         1253 a         2256 c         2293 g         1158 t
ORIGIN      
        1 accatctcgc acaagcgatt gcgcaggcgg ccaacggaca agccgaacag cgggctgccg
       61 gttagcacgg cgcggcgcaa aagatagccg acaaacgccg ggccgcctcc gatccgggac
      121 gtgcttggtc ttggcgcgta gtcacgccgc cttggccggc tgcgcgagcg tcacgaggtt
      181 gcgcagaatg atggcggttc cgcgcaggcg cgcatcggga ttttcccaat cgtcgaagaa
      241 gacgaccttc atgtcgggcc gcacgcgcgc tgcggggccc agctcccgga tgaacgcgac
      301 gagccgatcg ggattggcga aggtattgtc gcggaacgac acgactgcac ccttcgggcc
      361 ggtctcgatc ttttctacgt tggcctgccg gcacagcgac ttgattgcga cgatctggag
      421 aagatgctcc acctccaccg gcagcgggcc gaaacggtcg acgagctcgg cgccgaacgc
      481 ctcgatgtcc cgctcgtcct cgatttcggc gagccgtcgg taaagagcca ggcgcaccgg
      541 caggtcggcg acatagtcct cggggatcat caccggcgtc ccgacggtaa tttgcggcga
      601 ccacttgtcg gcgacgggcg cgctgatgcc ggccttgagg ctcgtcaccg cctcttccag
      661 catttgctga tagagctcga agccgacctc cttgatatgc ccggactgct cctcgcccag
      721 gagattgccg gcaccgcgga tatcgagatc gtgggaggcg agctggaatc ccgcgccgag
      781 cgtgtccagt gattgcagca ccttcagccg ccgttcggcc tgcggcgtga tcttgtccgc
      841 cgccggcagc gtgaacagcg aataggcgcg cagcttggaa cggccgactc gcccgcgcag
      901 ctgatagagc tgggatagcc cgaaccgatc ggcgcgatgc acgatcagcg tattggcagt
      961 cggaatatcc agaccggatt cgatgatcgt ggtcgagagc agcaggtcgt atttgccgtc
     1021 atagaaggca gacatgatgt cttcgagcac ggttgcgggc atctgcccat gcgcaacggc
     1081 gacccgcact tccggcacgt gcttgtcgag aaagtccttg gcgccggcga gatcctcgat
     1141 acgcggacag acatagaagg attggccgcc gcggtatcgc tcccgcaata gcgcctcacg
     1201 cacaatgacg ggatcaaagg gcgcgacaaa ggtgcgcacg gcaagccgat cgaccggcgg
     1261 cgaggcgatg atcgacagat cgcgcacgcc agacagcgcg agctgcaagg tgcgcgggat
     1321 cggtgtcgcg gtcagcgtga tcacatgcac ttcggcacgc agctgtttga gcctttcctt
     1381 gtgggccacg ccgaaatgct gctcctcgtc gacgatcagc aggccgaggt cgcggaactt
     1441 gatggccttg ccgagcagcg catgcgtacc gatgacgatg tcgacgctgc cgtcggcaat
     1501 ttttttcttt acccgcgcca gctccgagga agaaatcagt cgcgaggctt gcgcgatttg
     1561 aacgggaaac ccgcgaaacc gctcggtgaa ggtgtgcgca tgttggcggg caagcagcgt
     1621 ggtgggcacc accaccgcga cctgtctgcc gttcatggcg gcaacgaagg ctgcccgcaa
     1681 cgccacctcg gtcttgccga agccgacgtc gccgcagatc agccggtcca tcggccgtcc
     1741 ggacgcgagt tcgtccagta ccacgtcgat tgcggtctgc tggtcctcgg tctcttcgta
     1801 gggaaatccg gcgcagaact cgtcgtaggg tccaggttcg ccggtcaagc gcggagcctc
     1861 gcgcagctgc cgctcggccg cgatcttgat cagcgcgtcg gcaatatcgc ggatgcgccg
     1921 cttcatgcgc gccttgcgcg cctgccacgc gccgcccccc agccggtcga gctcgacccg
     1981 ggtctcttcc gcgccatagc gggagagaag ctcgacgttc tcgaccggca ggaacagctt
     2041 gtcaccgccg gcgtaatgga tttccaggca atcgtgcggc gcgccggcgg cttcgatcgc
     2101 ccgcagcccg atgaagcgac caatcccatg atcgacatgg acgacgaggt ccccggcggc
     2161 gaggctcgtc acttcggcga tgaagttctc cgtccggcgc gcggcgcgtc gcgggcggac
     2221 cagacggtcc cccaggatgt cctgctcgct gatgaccgcc gtctgggcgg tctcgaaccc
     2281 gctttcgagc cccagcacgg cgagcgcgac ctgggactgg ggcagcgcga gcgcctgcgg
     2341 ccatgagtcg accgcggcaa gctcggcaag cgcgtggtcg gcgagcacat gccccatgcg
     2401 ctcacgcgcg cctacgctcc acagcgcgat gacaactcgc ttgccggctg ccttcagcgc
     2461 cccaacgtgc cggctcacgg cttcgaacac gttgcggccg ggctcggcgc gctcggcggc
     2521 gaaattgcgg ccctgcttgg tgccggcgtc gatggcagac ccctgccctt cgggcacggc
     2581 gaacggggtc agtcgtgcaa gcgcggcggc ctcgaaccgc gcgccccact cggactcgct
     2641 cagataaagc cgccccggcg gcaacgggtg gtagggcggg cccgagtcac gctgggtgag
     2701 agcttgccgg cgcgcctcgt aataatcctc gatctgacgg agccgctcgc gcgcggcgtc
     2761 ctcggccagc ggctcgagca ccacggggca gtctgtagcg tagtcgaata gcgtctcgag
     2821 atgatcatgg aacagcggca gccaatgttc cacgccggga tggcgccggc cttcgctgac
     2881 ggcgtgatag aggacatcat cgggcgcagg cgccccgaat gccgcgacgt atcccaagcg
     2941 gaagcgccgg atcgtttcgc tcgtcagctg gaattcggca accggcacga gatcgagcgc
     3001 gcgcaactga tccgtggtgc gctggctttc tggatcgaag ctgcggatgg tctccagcgt
     3061 gttgccgaaa aaatcgagcc tgaccggctc cgccatgccc ggcgcataga gatcgatgat
     3121 gcctcctcgc accgcgtagt cgcccggctc gcgcaccgtc gatgcgcgca tgaagccatt
     3181 gagctcaagc cattgggtga tgtcgtccat ggcgagcact tggccgggcg caaccgacag
     3241 gcactgccgc gcaacgaagt cccgcgccgg cacgcgttga agcgcggcat tgaccgtggt
     3301 gagcagaacc gaaggccgga cggcatcagt tgcgcgcgca agccgagaca gcgccgtcat
     3361 gcgctgcgcg aggaaccctg gatgcggcga aacccggtca tagggcagac agtcccacgc
     3421 cggaaactcc tgcacggcga gatcgggtgc aaaaaaatcg agcgcacggg cgagcgcggc
     3481 catgcgcggg ccgtcccggc aaacaattac caggctggtt gccgtagcgc gcccccgcgc
     3541 agccacagca cgggccaggt cggcaaggac gaggccttca gcgccgtcgg tgacgcttgc
     3601 taatgtgagc gggcggccgg ggcggagaag ctcggcggga ttggacacgg cgctcatcgt
     3661 gcacccccgc cccttcggtt gaaatcgcgc agccgacgga acagcgccgt gtcgtaattc
     3721 gggggcacgt cggcttcacc ggtaatccag gccaagagtt cgcggtccgg cacgtccatc
     3781 aattgctcga agtcggtgag ttcgggggtt gtcaactgct cgatactggc gtcggcgaag
     3841 cgccccatga tcagatccgt ttcccgcatg ccgcgatgcc aggcgcggaa caaaaccttg
     3901 cgacggcgcg catccaatcc atcgctcgaa cgtgtcgtgc cggtcatatc aggcccaacg
     3961 ccaaaagccc ggacgggccg ggcgaaggtc atatagcgac gttcatccaa gatgtcagcg
     4021 ggccggccgc attgcttaag gcgcacgtcc gggcgagcat cggcgctgat agctttggat
     4081 ggcaatgcga ccgagcctgc tcaatccgtt gtttgcggcg attaccacgc ttcccggtat
     4141 cgggtcgcgg ctggagaagc tttaccggcg cctattcggc cgcgatgagc cagcgcgcgt
     4201 cctcgacctg ctctttcacc tcccgaccgg cgcgatcgac cggcgagcgc ggccaaagct
     4261 gaaggacacc gttcccgata cggttgtcac cgtcgcagtg aacgtggatc gccaccggcc
     4321 accgccgccg caccgccccc gtgcgcctta tcaaatctac accagcgatg aaaccggcga
     4381 cctcacgctg acatatttca acgcgcggcg ggattatctg cagaagctgc tgccggtcgg
     4441 cgaacggcgc tacgtctctg gcattgtcga gctctacgac caaatgcgcc aaatggtgca
     4501 tcccgaccgc gtcgtcgccg aagcggacct agccaagctg cccctggtcg agccggtcta
     4561 tccgttgacc gaagggctga gcctcaacca ggtgcgcaag gccgccgatg cctcgcttgc
     4621 gcgtctgccg gacttgccgg agtggcagga gacaagttgg gtcgcgcgcg agcgcttccc
     4681 ctctttcgct gatgcgctcc gcctgctcca ccggccggcc gagcccgccg accttcggcc
     4741 ggaaggattg gcatggacgc ggctggccta tgacgagttt ctcgcgggtc aaatggcgct
     4801 tgccctggtg cgcgcgcatc tgcgccggcc ggccgggcgg gcgacgctgg gaaccggaca
     4861 catcagaaaa aagctgatcg aaagcctccc ctattcgctt acgccctcac aggggcgggc
     4921 cattgccgag attgttgccg atctcgccaa gcccgaacgc atgctgcggc tcctgcaagg
     4981 cgacgtcggt tcaggcaaga cggtggtggc gctgctcgcc gcggcggccg tcatcgaagg
     5041 cggtcgacag accgcgctga tggcgccgac ggagcttttg gcgcgacagc acttcaatac
     5101 cactgcgccg ctcgctgccg cggccgcgat caacgtcgct attctgacag gtcgcgagcg
     5161 cggacgtgag cgcaatgcga tcctcgagaa gctcgctttc ggcgagatcc acgtgctgat
     5221 cggcactcac gccttgtttc aggagcaggt tgaatttcgc gatctcgcgc tcgccgtcgt
     5281 cgacgaacaa catcgctttg gcgtgcatca gcgcctggcg ctcgccaaaa agggtgaggc
     5341 ggtcgacgtg ctggtgatga cggcgacccc gatcccgcgc acactcgtgc tcacctattt
     5401 cggcgatatg gacgtttcgg agctgcgcga gaaacccgcc ggacgccagc cgatcgacac
     5461 acgaaccctt gctcttggcc ggctcgagga ggtgatcggc gccgttggcc gtgcgctggc
     5521 ggaaggccgc cgggtctatt gggtctgtcc gctggtcgag gtgaccgaga acgccgactt
     5581 cgccgccgcg gaagagcgct ttgcggcact gaaggagcgc ttcggcgcca tggtcgatct
     5641 cgtccacggt cgaatgaaag gcgacgcgaa ggatcgtgcc atggcgcgat ttgcgggggg
     5701 cgagacgcgt ctcctcgtgg ccaccacggt gatcgaggtc ggcgtcgacg tgccggaagc
     5761 gaccgtcatg gtaatcgagc acgccgaacg cttcggattg gcgcaactgc atcagctgcg
     5821 cggccgcatc gggcgcggtg gcgaacgctc gacctgcctg ctgctgtaca aggcgccgct
     5881 gggcgaaacc gccaaggcca ggctcaacat cctgcgcgag accgaggacg gctttcgcat
     5941 tgccgaggaa gatctcaggt tacgtggaga aggcgacgtt ctcggcacgc ggcaatccgg
     6001 tgtgccgggc ttccgcgtcg cccgggtcga aacgcacggc aagctgatcg gcgccgcacg
     6061 cgacgatgcc gcgctggctc tctcacgcga cccaacgctt gcctccgccc gcggacaggc
     6121 gttgcgtcat ttgctctatc tattcgagcg cgacgaggcg atcaggctga tccgggcggg
     6181 ctgattgacc cgcgatccca ggcgctctgt gcgaccaaag ctatttcgcc ggcgcggcgc
     6241 tatggtttgc ctgcaccgcg cgcgcactgc gcgcagtctc cgccaaggcc gcaagcctcc
     6301 tttgttggtc gccgggctgc accattccag ccgacatcag cagcgtcatc gccgcctcca
     6361 ccgtgatgtc gaggtcgata atatcgcggc gagcgacata gaagaagaat cccgtggtcg
     6421 gattgggcgt acacggcatg aacgcggcga cgtgctcggt gtccggcagc cgcgtcgcaa
     6481 tctccgggct cgcgggattc gagagaaaaa ccagcgacca catacccggc gagggaaact
     6541 ccaccagacc gacacgccgg aaactcgagc cgccttttcc aaacagcgtc tgaaagattt
     6601 gtttgaggct gttgtagatc gggcgcacga tcggcatgcg ggtgagaata ttttcgccga
     6661 tctcgacgag tttgcggccg acgaaattgg cggtcaggaa cccgaacagg gtgagcgtaa
     6721 cgaacgcgat gatcaggccg gtgccgggaa tagtcacggg caaataggtt tcaggccgat
     6781 atgcgatcgg aatgaagggt cgcaccagat catcgaccca gttgatgaac caccaggtga
     6841 gggcgatggt gatgtaggca ggggccacca ggatcaaccc ggtgaggaaa taattgcgca
     6901 gccggctgac gacgccatgt tggaggcgcc ctaccttggc aggctccggc ggcgccgcct
//
LOCUS       DATCWM010000285         4213 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_191001, whole genome shotgun sequence.
ACCESSION   DATCWM010000285 DATCWM010000000
VERSION     DATCWM010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4213
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191001"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1361)
                     /gene="phaZ"
                     /locus_tag="VIQ50_05450"
     CDS             complement(<1..1361)
                     /gene="phaZ"
                     /locus_tag="VIQ50_05450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007615999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoate depolymerase"
                     /protein_id="HEY9359858.1"
                     /translation="MAIGEFGGAPVAGGVNGPMYAAPAYWLYEMSQAALNPSRAFADA
                     ARLFYRNPANPLSYTAFGKTMAASLELFERSTRRYGKPEWNIASTVVGGEHVPVRISQ
                     VWERPFCRLLHFERAFERAPRRPQPRLLIVAPMSGHYPTLLRGTVEGFLPNHDVYLTE
                     WVDARMVPLSEGGFDLDDYIDYLISMLHLLGGDVHMLAVCQPSVPVLAAVARMEAEND
                     HYVPNSVVLMGGPIDTRVNPTAVNILAERRGVDWFRSNVITKVPFPNPGFMRDVYPGF
                     LQLHGFVSMNLDRHIEAHRKLFLHLVQADGDSAQKHREFYDEYLAVMDLAAEFYLQTV
                     ETVFVRHDLPKGVMTHRGIRVDPGKIRRVALLTVEGENDDISGVGQTEAAHRLCVNIP
                     PERKAHWLQPAVGHYGVFNGSRFRAEIVPRISDFVLSNNSSGARSSGRRGVSKLTPVA
                     LAAG"
     gene            complement(1561..2382)
                     /locus_tag="VIQ50_05455"
     CDS             complement(1561..2382)
                     /locus_tag="VIQ50_05455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9359859.1"
                     /translation="MSAAATSAITLAPHRIGAMVLRYIYLLRSSWTRLLELIYWPAVQ
                     LFVWGFLQFYIAQNSGFFARASGVFIAAVLMWDVLFRGQLGFSVSFLEEMWSRNLSNL
                     MISPLRPIEFVCALMIMSLIRLAIGMLPVTFLAMAFFGFNVYGLGLALAAFFVNLILT
                     SWAVGIVVAGVLLRNGMGAESLAWTLMFVLMPLACVYYPVSVLPSWLQAIAWTLPPTY
                     VFEGMRALLMEHVIRIDLMLEAFVLNVLYFAAGVFAFLQLLKSARRVGSLLQSGE"
     gene            complement(2379..3140)
                     /locus_tag="VIQ50_05460"
     CDS             complement(2379..3140)
                     /locus_tag="VIQ50_05460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015670165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9359860.1"
                     /translation="MAKIVEPVIAVDQLVKVYKTTRAVDGISFGLEGGSITGLLGGNG
                     AGKTTTIAMIMGLVMPTSGTVRVLGAEMPRQRYHVLHKMNFESPYVDMPHRLTVRQNL
                     KVFGRLYAVEDLDARIATLAGSLDLTEFLDRPTGKLSAGQKTRVALAKALINSPQVLL
                     LDEPTASLDPDTADWVRSHLEQFRKERGATVLLASHNMAEVERLCERVIIMKRGRIED
                     DDTPQRLLVRYGRQTLEEVFLDVARGRGEAREAAQ"
     gene            3283..>4213
                     /locus_tag="VIQ50_05465"
     CDS             3283..>4213
                     /locus_tag="VIQ50_05465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015689334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ActS/PrrB/RegB family redox-sensitive histidine
                     kinase"
                     /protein_id="HEY9359861.1"
                     /translation="MTEQLAEEAHRTGRSVRLDTLVRLRWLAVIGQTTAVLVVYFGLD
                     YELPIWACLAVIALAAWLNVALRIRFPMTQRLEPDRAAWLLAFDIAELAVLLFFTGGL
                     ENPFAFLFLGPVLISATALPARMTLMLGGFAVACATVLVFVHDPLPWDAEPPLELPAV
                     YVMGVWLSLLLAIAFIGLHAWQITEESRQLADALAATELVLAREQHLSQLDGLAAAAA
                     HELGTPLATITLIAKELQLAIKPESEHADDVRLLNEQAKRCRAILAKLTELSSGAPFD
                     RMKLSTLIEEVVAPHRNFGVAINVAVAPGEAAEP"
BASE COUNT          766 a         1383 c         1370 g          694 t
ORIGIN      
        1 cccgcggcca gcgccactgg cgtcagtttg ctcacgccgc ggcggccgga actgcgcgcg
       61 cctgaggaat tgttcgacag cacgaagtcg gagatgcgcg gcacgatctc ggcgcggaag
      121 cgcgagccgt tgaacacgcc atagtggcca accgccggct gcagccagtg tgccttgcgc
      181 tcgggcggga tgttgacgca cagccgatgc gccgcctcgg tctgaccgac gccggaaatg
      241 tcgtcgttct cgccttcgac cgtgagcaag gcaacgcgac ggatcttccc gggatcgacc
      301 cggatgccac gatgggtcat cacgcctttc ggcaagtcgt gacgcacgaa caccgtctcc
      361 accgtctgca gatagaactc ggcggcgaga tccatgacgg cgagatattc gtcgtagaac
      421 tcgcgatgtt tctgcgcgga gtcgccgtcg gcctggacga gatgaaggaa cagcttgcga
      481 tgcgcctcga tatgccgatc gaggttcatg ctgacgaacc cgtgcagctg cagaaagccg
      541 ggatagacgt cgcgcatgaa gccgggattt ggaaacggca ccttggtgat gacgttgctg
      601 cggaaccagt cgacgccgcg tcgttcggcg aggatgttca ccgccgtcgg gttcacccgg
      661 gtatcgatcg ggccgcccat cagcaccacg gaattgggga cgtagtggtc gttctccgcc
      721 tccatgcggg cgacggcggc gagcaccggg accgacggct ggcacaccgc gagcatgtgc
      781 acgtcgccgc cgagcagatg cagcatcgag atcaaataat cgatgtagtc gtcgagatcg
      841 aaaccaccct ccgacagcgg caccatgcgc gcgtccaccc actcggtgag atagacgtcg
      901 tggttgggca aaaagccctc gaccgtgccg cgcagcagcg ttggatagtg tcccgacatc
      961 ggcgcgacga tgagcaggcg cggctgcggc cggcgcggcg cccgctcgaa cgcgcgctcg
     1021 aagtgcaaga gccggcagaa cgggcgctcc cacacctgcg agatacgcac cgggacgtgc
     1081 tcgccgccga ccacggtcga ggcgatgttc cattccggct tgccgtaacg gcgcgtcgag
     1141 cgctcgaaca attccaggct cgcggccatg gtcttgccga aggcggtgta ggacagcggg
     1201 ttggccggat tgcgatagaa cagccgcgcg gcatcggcga aggcgcggga gggattgagc
     1261 gcggcttggc tcatttcgta gagccaatag gccggcgccg cgtacatcgg gccattgacg
     1321 ccccctgcga ccggggcgcc gccaaattcg ccaatcgcca ttttcccggc cctcggcggc
     1381 ttttgccgca ctgcagcatc ttgtcttgaa tctgacatac agtcaatctc ttcggcaggt
     1441 tatccacccg ctaccacaac gtagataatg attcggcggg cgttgttgcg tttgcgccgc
     1501 agcaaggctg gtatgatcaa cccgagggag cctcacgcaa ataaaccatc ggccgaccgg
     1561 ctattcgccg ctctgcagca gcgagccgac gcgccgcgcg ctcttgagca gttgcaggaa
     1621 ggcaaacacg ccggcggcaa aatagagcac gttgagcacg aacgcctcga gcatcagatc
     1681 gatgcggatc acgtgctcca tgagcagcgc acgcatcccc tcgaacacat aggtgggcgg
     1741 cagcgtccag gcgatcgctt gcagccagct tggcaacacg ctgaccggat aatagacgca
     1801 ggcgagcggc atcagcacga acatcaacgt ccacgccagc gactccgcac ccatgccgtt
     1861 gcgcaacagc acgcccgcga cgacgatgcc caccgcccag ctcgtcagga tcagattcac
     1921 gaagaacgcc gcgagcgcga ggccaagccc atagacgttg aacccgaaga aggccatcgc
     1981 caggaaggtc accggcagca tgccgatggc aagtcggatc aggctcatga tcatcagcgc
     2041 gcagacgaat tcgatcgggc gcaacggact gatcatcagg ttgctcaggt tgcgcgacca
     2101 catctcctcg agaaaggaca ccgaaaagcc gagttggccg cgaaacaaca cgtcccacat
     2161 cagcaccgcg gcgatgaaaa cgccgctggc gcgggcgaag aaccccgaat tctgggcgat
     2221 gtagaactgc agaaatcccc atacgaagag ctgcaccgcc ggccaataga tcagctcgag
     2281 aagccgcgtc caggacgagc gcaacaggta gatgtaacgc agcaccatcg cgccgatgcg
     2341 atgcggcgcc aacgttatcg cgctggtcgc ggccgcgctc attgcgccgc ctcgcgcgct
     2401 tcgccgcgcc cgcgcgcgac gtcgagaaac acctcttcga gcgtctggcg gccatagcgg
     2461 acgagcaggc gctgcggggt atcgtcgtcc tctatgcgtc cgcgcttcat gatgatgacg
     2521 cgctcgcaca ggcgctcgac ttccgccatg ttgtgggaag cgagcagcac ggtggcgccg
     2581 cgctccttgc gaaactgctc gaggtggctg cgcacccagt cggcggtgtc cgggtcgagc
     2641 gaggcggtgg gctcgtcgag cagcagcacc tgcggcgaat tgatcagcgc cttggcgagc
     2701 gcgacgcggg tcttctgccc ggccgaaagc ttgccggtcg gccggtcgag aaattccgtc
     2761 aggtcgagcg accccgccag cgtggcgatg cgggcgtcga gatcctccac cgcgtagagc
     2821 cgcccgaaca ctttgaggtt ctgccgcacg gtcagccggt gcggcatgtc gacatagggg
     2881 ctctcgaaat tcatcttgtg cagcacgtgg tagcgctggc gcggcatttc ggcgccgagc
     2941 acccgcaccg tgccggaggt gggcatcacc aggcccatga tcatggcgat ggtggtggtc
     3001 ttgccggcgc cgttcccgcc gaggagcccg gtgatggaac cgccttcgag cccgaacgag
     3061 atgccgtcga ccgcgcgggt ggtcttgtag accttcacca gctggtcgac ggcaatgacg
     3121 ggctccacga ttttggccat gtaaaaagtc gccctgcgcg gaaccgcaca tgtggcgtgg
     3181 agccgcgcac gaggcaagag gcatgggcgg tgctcgtccc cgccgagcat gcggcgacgg
     3241 cgaccgttga gcacgtgcgg cgaaggcgta cattgttgcg ccatgaccga gcagcttgcg
     3301 gaggaagcgc atcggaccgg gcgcagcgtg cggctcgaca cgctggtgcg cctgcgctgg
     3361 ctggcggtca tcggccagac caccgccgtg ctcgtcgtct atttcggcct cgattacgag
     3421 ctgccgatct gggcgtgcct cgcggtgatc gcgctcgccg cctggctcaa cgtggcgctg
     3481 cgcattcgtt tccccatgac gcaacggctc gagcccgacc gggcggcgtg gctgcttgcc
     3541 ttcgatatcg ccgagctcgc ggtgctcctg ttcttcaccg gcgggctgga aaaccccttc
     3601 gcgttccttt ttctcggacc ggttctgatc tcggccaccg cactccctgc gcgcatgacg
     3661 ctgatgctcg gcggcttcgc cgtcgcctgc gccaccgtgc tcgtgttcgt gcacgacccg
     3721 ctgccctggg acgccgagcc gccgctcgaa ctgcccgcgg tctatgtgat gggggtttgg
     3781 ctttccctct tgctcgcgat cgcgttcatc ggcttgcacg cctggcagat caccgaggaa
     3841 tcccgacagc tcgccgacgc gctggcggcg accgaattgg tgttggcccg cgagcagcat
     3901 ctctcccagc tcgacgggtt ggccgccgcc gccgcccacg agctcgggac gccgcttgcc
     3961 accatcacgc tgattgccaa ggagctgcag ctcgcgatca agccggagtc cgaacacgcc
     4021 gatgacgtgc gcctgttgaa cgagcaggcc aagcgctgcc gcgccattct cgcgaaactg
     4081 accgagctct cgagcggcgc gccgttcgac cgtatgaagc tgtccacgct gatcgaggaa
     4141 gtggtggcgc cgcatcgcaa cttcggtgtt gccatcaacg tcgccgtggc gcccggtgag
     4201 gcggccgagc cgg
//
LOCUS       DATCWM010000286         8149 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_207425, whole genome shotgun sequence.
ACCESSION   DATCWM010000286 DATCWM010000000
VERSION     DATCWM010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8149
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_207425"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(127..825)
                     /locus_tag="VIQ50_05470"
     CDS             complement(127..825)
                     /locus_tag="VIQ50_05470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012093337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9359862.1"
                     /translation="MLSVEHLQAAYGPAQVLFDISLRVGAGEVVTLLGRNGMGKTTTI
                     RTIMGLLPACGGTAAFEGVSLIGLPAYRIAQAGLGLVPEGRQIFASLSVEENLIATAA
                     SRFALPRWTLERVYDFFPPLAERRRHMGHELSGGEQQMLAIGRALMTNPKLLILDEAT
                     EGLAPLLRLEIWQCLARLKAEGQAILIVDKHLGALLKLADRHAIIEKGQVVWTGTSAA
                     LAADPTIAQRYLQV"
     gene            complement(828..1580)
                     /locus_tag="VIQ50_05475"
     CDS             complement(828..1580)
                     /locus_tag="VIQ50_05475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9359863.1"
                     /translation="MGEPAVRLQNLRKSFDALVVTDDLSLDVMPCELHAIIGPNGAGK
                     TTLINQISGLIAPDSGTIQFDGRDITGLPVHARAALGLARSFQVSSILPGFSALENVA
                     LAVQSRAGSSYRVLGRAAAEPGLNESALAALADVGLAERAHMLAGELAHGEKRALEFA
                     IALAMQPKVLLLDEPMAGTGREETARLVGLLRRLKGRFSVVLVEHDMTAVFALADRVS
                     VLLYGRILAGGTPAAVRADPRVVAAYLGDKME"
     gene            complement(1573..2562)
                     /locus_tag="VIQ50_05480"
     CDS             complement(1573..2562)
                     /locus_tag="VIQ50_05480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9359864.1"
                     /translation="MRASLAASLPRPRGALPAGTLPAGIFLVLALLPIVALFTGGSYL
                     VSLGSRVMIFAIAAVALDLLVGYGALISFGHAAFVGLGAYAVGILSAYGITDALVSLP
                     VALAVSAAYAFLTGVVCLRTKGVYFIMITLAFGQMAFFTASSLAPFGGDDGLTIAARN
                     TVAGFALLRNERAFYYVVLFCLLGTYLFCRALVASRFGRVVRGAKENPVRVATIGFDV
                     YHFQLATYVIAGGLAGLAGFLLANATEFVSPAYMSWQRSGELIVMVLLGGLGSLDGAI
                     IGAAAYLLTEEWLSGVTEHWKVIFGPVLVLIVLFARGGLLGLASALVRRLGRG"
     gene            complement(2564..3487)
                     /locus_tag="VIQ50_05485"
     CDS             complement(2564..3487)
                     /locus_tag="VIQ50_05485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006615285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9359865.1"
                     /translation="MPSSLLVVQILNGLQLGVLLFLIAAGLTLVFGVMDFINLAHGVQ
                     YMLGAYLAVAFYSLTSSFLAALILALAATLVFGLLLEFAIFRHLYDRDHLDHVIATFG
                     IILFLNHGVKLVWGAAPLSLPMPELFSGSVKLADGLLYPVWRLVVIACGLLVAVLLYV
                     LVAHTRIGMLVRAGANNAAMVSALGVNIRRLFMIVFGFGAMLAGFAGIMIAPILSVEP
                     GMGDTVLILAFVVIVIGGIGSIRGAFLAALLIGLVDTLGRSFSVDILRLVMEPSPART
                     VGPAIASMLIYLLMAVVLYIRPSGLFPAKGR"
     gene            complement(3587..4753)
                     /locus_tag="VIQ50_05490"
     CDS             complement(3587..4753)
                     /locus_tag="VIQ50_05490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359866.1"
                     /translation="MKRLVLLAAAAMSLGGTGAQAQEKLKIGIIATLSGPPAVLGQQL
                     RNGFNLAVKTLDGKLGGREVEIIVADDELKPDLAVTKVKALVERDKVEFVVGPIFSNV
                     LAAIMKPVTEGGAILISPNAGTSNFAGKECNANFFVTSYQNDQVFAVSGKHAQDSGIK
                     KVFLMAPNYQAGKDALAGFKAFFNGEIVDEVYVPLNQLDFSAELAKIAAAKPDAIYVF
                     LPGGMGVNFVKQFRQAGLAATTTFLSTFTVDESTLPAQQDAALGFFGGANWAPDLDNP
                     QNKAFVAAYEKEFGAVPATYAFQSYDAALLIDSAVRQVKGNVTDREALRAAMMKADFK
                     SLRGNFKFNTNHYPIQDFYLVKVAKRPDGKFETQIVKKVFENYADPHAKDCAMK"
     gene            5008..5460
                     /locus_tag="VIQ50_05495"
     CDS             5008..5460
                     /locus_tag="VIQ50_05495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010659178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY9359867.1"
                     /translation="MQPLTAGITKANTGIDGIVWQILGQTYVPKQVSEHSFAWHATFP
                     PGTFVPPHIHPTQEEFIYMFEGRFDLLIDGKDFVAGPGDLIRLPIGIAHGIFNKTDQP
                     VKCFFWVTPTRALYDLFWAIHSMKEQKPDEVVALAAKHEVVFLPPPAQ"
     gene            complement(5515..6759)
                     /locus_tag="VIQ50_05500"
     CDS             complement(5515..6759)
                     /locus_tag="VIQ50_05500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012093333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin-dependent oxidoreductase"
                     /protein_id="HEY9359868.1"
                     /translation="MKVIIVGGGIGGLTTALMLHARGIDCEIYEQSDAIRELGVGINT
                     LPHAIKELAELGLLDRLDAAGIRTYELFYTNRFGQEIWRELRGTDAGYEVPQFSIHRG
                     RLQAVIYQAVRARLGESRIHTNHRLGHFREDEAGVSAYFFDRHGSHRSSARGDALVGA
                     DGIHSTVREMLYPHEGPARWNGAMLWRGAIDWPTFLTGRSMVIAGGMAAKLVVYPIAE
                     GTRPDRRLTNWAVVARIGDGSNPPPNKEDWSRKGRFDELMPHVQRFRIPYVNAQALIE
                     ATPEFWEYPMCDRDPLPRWSHGRVTLLGDAAHPMYPVGSNGASQAILDARCLADCLRS
                     AEHVVHALWMYEQERLPMTAQIVRMNRKGGPEGVIDAVEERAPDGFTRIDDVLSFAER
                     EAIVRGYASTAGFAREQVNKAA"
     gene            complement(6931..7761)
                     /locus_tag="VIQ50_05505"
     CDS             complement(6931..7761)
                     /locus_tag="VIQ50_05505"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359869.1"
                     /translation="MDTVAVAPITYAGAAELKQDVANFKEALRGVDVAEAFLPVAAPT
                     SVIPDRKNEYYKSDDDLQQAIAEAMRVEYKTIVDAGLLVQLDDARAAVSYDRMVPPKT
                     LEEYRAWLARQVEIINHAIEGLPREKIRYHVCWGSWPGPHSSDVPFRDIADLVLQVRA
                     GGYSIELANPRHEHEWRLWEHLKLPPETVLIPGVISHATNIVEHPELVAERIVRLARL
                     VGRENVIASTDCGFAQVTYFARVHPQIMWAKLEALVEGARLASKELWGRDNRAPRSAA
                     "
     gene            complement(7667..>8149)
                     /locus_tag="VIQ50_05510"
     CDS             complement(7667..>8149)
                     /locus_tag="VIQ50_05510"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359870.1"
                     /translation="TARQGEDARMKRSTDRILTTHVGSLIRPPALREFLAAKEAGKPF
                     DQAAYANCLKECVAEVVCKQADIGIDVISDGEFGKAISWAQYALFRLGGFERRPFAGG
                     NPFTRGVDRTRFAELRGARRARQGRDRDGYGGGGADHLCRRGRTQAGRRQLQGGAARR
                     "
BASE COUNT         1547 a         2613 c         2639 g         1350 t
ORIGIN      
        1 caccggcggc ggtctgcttg gggctggtcg cggcgctgat cgtcgtcgcc gcgccggcgc
       61 tcatgctgcg ctatgagaaa cacctgctgg cgaaggccga actgctcccg aacgacccgg
      121 ccggactcac acctgcagat aacgttgcgc gatggtcgga tccgcggcca atgccgccga
      181 tgtaccggtc cacaccacct gtcccttctc gataatcgcg tgcctgtcgg cgagcttgag
      241 cagcgcgccg agatgtttat cgacaatgag aatagcctga ccttcggctt tcaaccgcgc
      301 gaggcattgc caaatctcga gccgcagcag cggcgccagc ccttcggtcg cctcatccag
      361 gatgagcagt ttcgggttcg tcatcagcgc gcgaccgatc gccagcatct gctgctcgcc
      421 gccggacaat tcatggccca tgtggcggcg gcgctccgca agtgggggaa agaaatcgta
      481 gacgcgctcc agcgtccacc gcggcagcgc gaaacgtgac gccgcagttg caatcagatt
      541 ctcctcgacg ctcaggcttg caaagatctg ccgcccctcg ggaacgaggc cgagacctgc
      601 ctgcgcgatc cggtacgccg gcagcccgat cagcgacacg ccctcgaacg cggcagttcc
      661 tccgcaggcg ggcagcaggc ccatgatggt ccgaatcgtg gttgtcttgc ccattccgtt
      721 gcggccgagc agggtgacga cttcgcccgc tccgacgcgc aagctgatgt cgaacagaac
      781 ctgcgccggg ccataggcgg cctgcagatg ctcgacgctc agcatgctca ctccatcttg
      841 tcgccgagat aggcggcgac cacccgcgga tcggcgcgca cggcggcggg tgtgccgccc
      901 gcgagaatgc ggccgtagag caagaccgag acgcggtcgg cgagcgcgaa caccgccgtc
      961 atgtcgtgct cgaccagcac cacggaaaag cgtcccttga gccgccgcaa aagcccgacc
     1021 aggcgcgcgg tttcctcgcg gccggtgcct gccatcggtt cgtcgagcaa caggaccttg
     1081 ggctgcatcg ccagcgcaat ggcgaactcg agcgcgcgct tctcgccgtg cgcgagttca
     1141 cccgcgagca tatgcgcacg ctcggcgaga ccgacatcgg caagtgcggc cagcgccgac
     1201 tcgttcaagc cgggctcggc ggcggcgcgg cccaggacgc ggtagctcga gccggcgcgc
     1261 gattgcacgg cgagggcgac gttctcgagg gcggagaagc cgggaaggat cgagctcacc
     1321 tggaatgacc gcgctaggcc gagcgcggcg cgggcgtgta ccggcaggcc cgttatgtcg
     1381 cgtccgtcga actggattgt tcccgagtct ggagcgatca gcccggaaat ctggttgatc
     1441 agcgtcgtct tgccggcgcc atttgggccg atgatggcgt gcagctcgca cggcatgacg
     1501 tcgaggctca aatcatcggt gacgaccagc gcgtcgaacg acttgcgcag gttttgcagg
     1561 cgcaccgccg gctcacccac ggccgagcct ccgcacgagc gcgctcgcca agccgagaag
     1621 accgccgcgc gcaaacagaa cgatgagcac gagcaccggt ccgaagatca ccttccagtg
     1681 ctcggtgaca ccggagagcc actcctcggt caggaggtag gcggcagccc cgatgatcgc
     1741 gccgtcaagc gaacccaatc cgccgagcag caccatgacg atcagctcgc ccgagcgctg
     1801 ccaggacatg tacgccgggc tgacgaattc cgtggcattg gcaagcagga agcccgcaag
     1861 tcccgccagt ccgccggcga tcacgtaggt ggcgagctgg aagtggtaga cgtcgaagcc
     1921 gatcgtcgcc acgcggacgg ggttttcttt cgcgccgcgc acgacgcggc cgaagcgcga
     1981 ggcgaccagc gcgcggcaaa acagataagt gcctagcagg cagaagagga cgacgtaata
     2041 gaacgcgcgc tcgttgcgca acagcgcgaa gccggcaacc gtgttgcgtg cggcgatggt
     2101 gagcccgtcg tcgccgccga agggcgccag cgagcttgct gtgaagaagg ccatctgccc
     2161 gaaggcgagc gtgatcatga tgaaatagac gcctttggtg cgcaggcaaa ccacgccggt
     2221 caagaacgcg tatgctgcgg agacggcgag cgctacggga agcgagacga gcgcatcggt
     2281 aatgccatag gcggacagga tgccgacggc ataggcgccg aggccgacga aggcggcatg
     2341 gccgaacgag atcagcgcgc catagccgac cagaagatcg agcgccaccg cggcgatagc
     2401 gaagatcatc acccgcgacc cgaggctgac gagatagctg ccgccggtaa acaacgccac
     2461 aatcggcagg agagcgagca ccaagaagat gcccgccggc agcgttcccg ccggcagagc
     2521 gccgcgcggg cgaggtaggg aagcggcgag ggacgcgcgc atctcaccgc cccttcgccg
     2581 ggaacagtcc gctcgggcgg atatagagca cgaccgccat caacaggtag atcagcatcg
     2641 aggcgatggc cggtcccacg gtgcgagccg gtgagggttc catcacgagg cgcaggatat
     2701 cgacggagaa cgagcgaccg agcgtgtcga cgaggccgat gagcagggcg gccagaaagg
     2761 cgccgcggat cgagccgatg ccgccgataa cgatgaccac gaaggcgagg atcagcacgg
     2821 tgtcgcccat gccgggctca accgacagga tcggcgcgat catgatgccg gcaaagccgg
     2881 cgagcatggc gccgaagccg aatacgatca tgaacaggcg tcggatattg acgccgagcg
     2941 cggataccat tgcggcattg tttgccccgg cgcgcaccag catgccgatc cgggtatgcg
     3001 ccaccagcac gtaaagcagc acggcgacga ggagcccgca ggcgatcact acgagccgcc
     3061 acacgggata gagcagtcca tcggcgagct tcaccgaacc ggagaacagc tctggcatcg
     3121 gcaggctgag cggcgccgcg ccccacacga gcttcacccc atgattgagg aaaaggatga
     3181 tgccgaaggt agcgatgacg tgatcgagat gatcgcggtc gtagagatga cggaagatcg
     3241 cgaattccag cagaagtccg aaaacgagcg tggcggcgag cgccaggatg agcgcggcga
     3301 gaaagctgct ggtgagcgaa tagaaggcga ccgcaagata ggcgccaagc atatactgca
     3361 cgccgtgcgc gaggttgatg aaatccatca ccccgaacac cagcgtcagg cccgccgcaa
     3421 tcagaaacaa aagtacgccg agctgcagac cgttgaggat ttgaactacg aggagggaac
     3481 tgggcatgac tgatgcgcga gctggcgccg tagtctcggt acgctccctc gccccgtgca
     3541 gcagacccga aggcgcagcg cgaactctgc tccgaaatcg cggcgttcac ttcatcgcgc
     3601 agtccttcgc gtgcggatcg gcgtaattct cgaacacctt tttgacgatc tgggtctcga
     3661 acttgccgtc gggacgcttg gcgaccttga ccagatagaa atcctgaatc ggatagtggt
     3721 tagtgttgaa tttgaagttg ccgcgcagcg acttgaaatc cgccttcatc atggcggctc
     3781 gcagcgcctc ccggtctgtg acattgccct tgacctgacg caccgcgcta tcgatcaaga
     3841 gcgccgcgtc gtaggactgg aacgcgtagg tcgcgggcac cgcgccgaac tctttctcgt
     3901 aggccgcgac aaacgccttg ttctgcggat tgtcgagatc gggcgcccag ttggcgccgc
     3961 caaaaaaccc gagtgccgca tcctgttggg cgggcaacgt cgattcgtcg accgtgaagg
     4021 tggaaaggaa agtcgtcgtt gcggcgagtc ccgcttgtcg gaactgcttg acgaaattga
     4081 cccccattcc gccgggcagg aacacgtaga tggcgtcggg tttggccgcc gcgatcttcg
     4141 cgagctcggc cgagaaatcg agctggttca gcggcacgta gacttcgtcg acgatctcgc
     4201 cattgaaaaa cgccttgaac ccggcgagcg cgtccttgcc cgcctggtaa ttgggcgcca
     4261 tcagaaacac ctttttgatc ccgctatcct gggcatgttt gccggagacg gcgaatacct
     4321 gatcgttctg atacgaggtg acgaagaaat tcgcattgca ttctttgccg gcgaagttcg
     4381 aggtgccggc gttggggctg atcaagatcg cgccaccctc ggtcaccggc ttcatgatgg
     4441 cggcgagcac gttggagaaa atcggcccga cgacgaattc gaccttgtcg cgctccacca
     4501 gggctttgac cttggtcacc gcgaggtcgg gcttgagctc gtcatcagcg acgatgattt
     4561 cgacctcgcg cccgccgagc ttgccgtcga gcgtcttgac cgcgagattg aatccgttgc
     4621 gaagttgctg tccgagcacg gccggcggac cggacaaagt ggcgatgatg ccgatcttga
     4681 gcttttcctg cgcctgcgcc cccgtgcctc ccaggctcat cgccgcggcg gcgagcagga
     4741 ccagtcgctt catggccacc tccctgtgag ttcgcttcgg acgtctaaga tgccgccgct
     4801 agtctaggtt cgaaggatgg ctcctgtgaa ggcggctcgc ggctgcggcg tggtgcgagc
     4861 ctgctcgctc cgttgcgcct cgatgccatg acatttacgc tgtgacccgg agcatctctg
     4921 tcgcccggca tcgttctgct gcgcaatttt gcgctcgaac atccaaacgg ccgaggcgag
     4981 cgacaagatt aggggagttc gcgcgccatg caaccgctga ccgcaggcat caccaaggcc
     5041 aacaccggca ttgacggcat cgtctggcag atcctcggcc agacctacgt gcccaagcag
     5101 gtctccgagc attcgttcgc ttggcacgcg acgttccccc cgggcacgtt cgtgccgccg
     5161 cacatccatc cgacccagga agaattcatc tacatgttcg agggccgctt cgatctcctg
     5221 atcgacggca aggatttcgt ggcgggcccc ggggacctga tcaggctgcc gatcggaatt
     5281 gcccacggca tcttcaacaa gacggaccag ccggtgaagt gcttcttctg ggtgacgccc
     5341 acgcgcgcgc tctatgacct gttctgggcc atccacagca tgaaggagca gaagcccgac
     5401 gaggtggtcg cgctcgccgc caagcacgag gtggtgttcc tgccgccacc ggcgcagtaa
     5461 tcacgtcggg tgggcaaaga aacccgacga ttttgcccgc tctacggctg agggctatgc
     5521 tgccttgtta acctgctcgc gcgcgaagcc cgcggtggac gcgtagccgc gcacgatggc
     5581 ctcacgctct gcgaacgaca gcacgtcgtc gatacgggta aagccgtcgg gagcgcgctc
     5641 ttcgaccgcg tcgatcaccc cctcaggtcc gcctttgcga ttcatgcgca cgatctgggc
     5701 ggtcatcggc agccgttcct gctcgtacat ccagagcgca tggacgacgt gctcggcgct
     5761 gcgcaggcaa tcggcgaggc agcgggcatc gaggatagcc tgggaggcgc cgttcgagcc
     5821 gaccgggtac atgggatgcg cggcgtcgcc gagcaaggtg acgcggccgt gcgaccagcg
     5881 cggcagcggg tcgcggtcgc acatcgggta ttcccaaaat tcgggggttg cttcgatcaa
     5941 cgcctgcgcg ttcacgtagg ggatgcgaaa gcgctggacg tggggcatca attcatcgaa
     6001 ccgtcccttg cgtgaccagt cttccttgtt cggcggtggg ttcgagccgt cgccgatccg
     6061 cgccaccacc gcccagttgg tgaggcgtcg gtccggccgc gttccctcgg cgatagggta
     6121 aacgacgagt tttgccgcca tgccgccggc gatgaccatc gagcggccgg tgaggaacgt
     6181 cggccaatcg atggcgccgc gccaaagcat ggccccgttc cagcgcgcgg gaccttcatg
     6241 cgggtagagc atttcgcgca cggtcgagtg aatgccgtcc gcgccgacga gcgcgtcgcc
     6301 gcgcgcgctc gatcgatgcg agccgtggcg gtcaaagaaa taggcgctca cgccggcctc
     6361 atcctcgcga aaatgcccga gccggtggtt ggtgtggatg cgcgactcgc cgaggcgggc
     6421 gcggaccgcc tggtagatga ccgcctgcag ccggccgcga tggatggaaa attgcggcac
     6481 ctcatagccg gcgtcggtgc cgcgcaactc gcgccagatc tcctgcccga agcggttggt
     6541 atagaacaac tcgtaggtgc ggattcccgc cgcatcgagg cgatcgagca gccccagctc
     6601 cgccaattcc ttgatggcat ggggcagcgt attgatgccg accccgagct cgcgaatggc
     6661 gtcggactgc tcataaatct cgcagtcgat gccgcgggca tgcagcatga gggcggttgt
     6721 gagaccgccg atgccgccgc cgacgataat gaccttcatt gcgaactcac aacaaaccca
     6781 caacgtgcga gaataatgat tcgcaaagtt ggtccggcgc aacaattttt gcctgacgtc
     6841 gttgacgccg gcaggccgag cctatccgac tgtattggtt aaagaaatcc accacggggc
     6901 ggatccgcgc gcgccaggat cggcacgccg tcacgccgcg ctgcgcggcg cgcggttatc
     6961 gcgcccccat agctctttgc tcgcgaggcg agccccctcg accagcgcct cgagcttcgc
     7021 ccacatgatc tgcgggtgca cccgcgcaaa atacgtcacc tgcgcgaagc cgcagtcggt
     7081 gcttgcgatc acgttctccc gccccacgag gcgggccaga cggacgatgc gttcggcgac
     7141 gagctccgga tgctcgacga tgttggtggc gtggctgatc acgccgggga tgagcaccgt
     7201 ctccggcggc aatttgagat gctcccacag ccgccattcg tgctcgtgcc gcggattggc
     7261 aagctcaatg gaatagccac cggcacgcac ctgcaagacc agatcggcga tgtccctgaa
     7321 gggaacgtcg gagctgtgcg gtcccggcca gcttccccag cagacgtgat atcgaatctt
     7381 ctcgcgcgga agtccttcga tcgcgtggtt gatgatctcg acctggcgcg cgagccaggc
     7441 gcggtactcc tcgagtgtct tgggcggcac catgcggtca tagctgacag cggcacgcgc
     7501 gtcgtcgagc tgcaccagca agccggcatc gacgatcgtc ttgtactcca cgcgcatggc
     7561 ctcggcgatc gcctgctgaa gatcgtcgtc gctcttgtag tattcgttct tgcgatcggg
     7621 aatgacgctc gtcggcgccg ccacgggcag aaacgcctcc gccacgtcaa cgccgcgcag
     7681 cgcctccttg aagttggcga cgtcctgctt gagttcggcc gcgccggcat aggtgatcgg
     7741 cgccaccgcc accgtatcca tcacggtctc gaccttgtcg cgcgcgtcga gctccgcgta
     7801 gttccgcaaa gcgcgtgcgg tcgacgccgc gggtgaaggg attgccgcct gcgaacggcc
     7861 gacgttcaaa gccgccaagc cgaaacagcg catattgcgc ccagctgatc gccttgccga
     7921 actcgccgtc gctgatgacg tcgatgccga tatcggcttg cttgcacacg acctcggcga
     7981 cgcactcctt caggcaattt gcataggccg cctggtcgaa cggcttgccg gcttccttcg
     8041 cggcgagaaa ttcgcgcaac gccggcgggc ggatgaggct gccgacatgg gtggtgagga
     8101 tccggtcggt gctgcgtttc atccgcgcgt cctccccctg cctcgccgt
//
LOCUS       DATCWM010000287         3431 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_2430, whole genome shotgun sequence.
ACCESSION   DATCWM010000287 DATCWM010000000
VERSION     DATCWM010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3431)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3431)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3431
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2430"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(152..1132)
                     /locus_tag="VIQ50_05515"
     CDS             complement(152..1132)
                     /locus_tag="VIQ50_05515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018319531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005488 - binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0042918 - alkanesulfonate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aliphatic sulfonate ABC transporter
                     substrate-binding protein"
                     /protein_id="HEY9359871.1"
                     /translation="MTIISRRLLSAGALAFALLPAAQLRAADNPKEIYVDWATYNPVS
                     MLLKDKGFLEKEFAKDGIKVVWVQTNSSSNALQFLNAGSINFGSTAGSAALVARINGN
                     PIKSVYVYSRPEWTALVATKDSGINKVADLKGKKVAMVRGTDPHIFTVRALLAAGLSD
                     KDITPVLVQQHADGGNLLIRGDVDAWAGLDPMMAQHEIKDGARLFYRNREANTWGILN
                     VREEFAKDHPDIVRRVISAYEEARKYSLAHYDELKKTFIAVTKLPDDVVDKQLKERTE
                     LTHNKVGPAQRESILEAGIALQKAGVIGPSVDVKKSVDDLIDDRYVTAAN"
     gene            1466..>3431
                     /locus_tag="VIQ50_05520"
     CDS             1466..>3431
                     /locus_tag="VIQ50_05520"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HEY9359872.1"
                     /translation="MLTPTETSPEAEIFDAAAIAAELARLSEVHSGNERELRLEVSRH
                     LRAALARGRAAVEALLIADRHGRRCAERLCAMQDEIVRVLYEFAIKHLYPAQNPSEAE
                     HMAVVATGGYSRGVLAPGSDIDLLFLLPYKQTAWGESVAETILYCLWDMGLKVGHATR
                     SVNECIRAAKADMTIRTAVLEARFLLGDRKLYDELVARFDKEVVPGTTAEFVAAKLAE
                     REERHRRAGQSRYLVEPNVKDGKGGLRDLHTLYWIAKYVYRVREREELIALGVYDPRE
                     YRRFRRCGDFLWAVRCHMHFLTGRAEERLSFDIQREIAVRLGYTEHPGLRDVERFMKH
                     YFLIAKDVGDLTAILCAKLENRQAKAMPVLSRMMARFLPRQRHTLSETEDFVVDYNRI
                     NVADENVFKRDPVNLIRIFHLAQKYNLAFHPDAMHLATRSLRLIDQGLRENEEANRLF
                     LEILTSKNDAETVLRRMNEAGVLGTFVPAFGRIVAMMQFNMYHHYTVDEHLVRCIGAL
                     SDIEAGRAEDAKFATELMRTIQPRHRDLLYVAMFLHDIAKGRVEDHSIAGARIARHFC
                     PRLGFTPAETETVAWLIEVHLLMSTVAQSRDLSDRMTIEHFSAVIQSVERLKLLTILT
                     AADIKAVGPGVWNGWKAQLICTLYYETEPVL"
BASE COUNT          603 a         1125 c         1081 g          622 t
ORIGIN      
        1 cgcagcacgc gcgccgctcc tcctttcgag attgcctccg gcgccccggc ctgttccgca
       61 tccgcggtca tggagacaaa agacacggcg gcgccttcca atgcaatatc gccaatgccc
      121 aatcgccgag ccgctccgcg cgcgcggcgc gtcagttcgc agccgtcacg taacgatcgt
      181 cgatgaggtc gtcgaccgac ttcttgacgt cgacgctcgg accgatcacg cccgccttct
      241 gcagggcgat acccgcttcc aggatcgatt cccgttgcgc cgggccgacc ttgttgtggg
      301 tcagctcggt gcgctccttg agctgcttgt cgacgacgtc gtcggggagc ttggtgacgg
      361 cgatgaaggt cttcttgagc tcgtcgtagt gggcgagcga atatttgcgc gcctcctcgt
      421 aagcggaaat cacccgccgc acgatgtcgg ggtgatcctt ggcgaactcc tcgcgcacat
      481 tgaggatgcc ccaggtattg gcctcgcggt tgcggtagaa cagccgcgcg ccgtccttga
      541 tctcgtgctg cgccatcatc gggtcgaggc cggcccaggc gtcgacgtcg ccacggatca
      601 gcaggttgcc gccgtcggcg tgctgctgca cgagcacggg cgtgatgtcc ttgtcggaga
      661 ggccggccgc gagcagcgcg cgcaccgtga agatgtgcgg atcggtgccg cgcaccatcg
      721 caaccttctt gcctttgagg tccgcgacct tgttgatgcc gctgtccttg gtggcgacga
      781 gggcggtcca ttcggggcga gaatagacgt agaccgactt gatgggattg ccgttgatgc
      841 gcgcgacaag agcggcggag ccggcggtcg agccgaaatt gatcgagccg gcattgagga
      901 attgcagcgc gttgctcgag ctgttggtct gcacccaaac aaccttgatg ccgtccttgg
      961 cgaactcctt ctcgaggaag cctttatcct tgagcagcat cgacaccggg ttgtaggtcg
     1021 cccagtcgac gtagatctcc ttgggattgt cggcggcgcg cagctgcgca gcgggaagga
     1081 gcgcgaatgc cagcgcaccg gccgacagca aacggcggga aattatggtc atgacgactc
     1141 catgcgttga acctcgccgc gatggagcgg gagaggccgt tgatgaaggc gggaggtttt
     1201 gcccgccgtc agcctggcga ggggcgggcc ccgcgcttta gctgaatttg tagagcgccc
     1261 gcaagctgct tgctcaaatc ggcgctaggt ttatttctta agaagcctaa ccaaaggcgt
     1321 caatgagaat tatttgtcgc tattgcaatg cacattagca attatttttg tttccacacc
     1381 atatcgcggg atacggccgc cgccccgcgc ctgctgccgg tgccggtgac atatcgcctg
     1441 cgctccgtta tcccggtgtg agcccatgct gaccccgacc gagacgtcgc ccgaagccga
     1501 aattttcgat gcggctgcca tcgcggcgga gcttgcgcgg ctgagcgaag tccattccgg
     1561 caacgagcgc gagctgaggt tggaggtctc gcggcacctg cgcgcggcgc tggcgcgcgg
     1621 ccgcgcggcg gtcgaggcct tgctcatcgc cgaccggcac gggcggcggt gcgccgagcg
     1681 gctctgcgcc atgcaggacg agatcgtgcg cgttctctac gagttcgcga tcaagcacct
     1741 ctacccggcg cagaacccgt ccgaagccga gcacatggcg gtcgtcgcca ccggcggcta
     1801 tagccgcggc gtgctcgctc ccggctccga catcgatctc ctgttcctgc ttccgtacaa
     1861 acagaccgcc tggggcgaat ccgtcgccga aacgatcctg tattgcctgt gggacatggg
     1921 acttaaggtc gggcacgcca cacgctcggt caacgaatgc atccgcgcgg ccaaggccga
     1981 catgaccatc cgcaccgcgg tgctcgaggc gcgctttctt ctcggcgacc gcaaactcta
     2041 cgacgaactg gtcgcacgct tcgacaaaga ggtggtgcca ggaaccaccg cggaattcgt
     2101 cgccgccaag ctcgccgagc gggaggaacg gcatcggcgg gccggccagt cccgctatct
     2161 cgtcgagcct aacgtcaagg acggcaaggg cgggctgcgc gacctgcaca cgctctactg
     2221 gatcgccaaa tacgtttatc gcgtgcgcga gcgcgaagag ctcatcgcac tcggcgtcta
     2281 cgacccgcgc gaatatcgcc ggtttcgccg ctgcggcgac ttcctctggg cggtgcgctg
     2341 tcacatgcac ttcctcaccg gccgggcgga ggagcggctg tcgttcgaca tccagcgcga
     2401 gatcgcggtg cggctcggct acaccgagca tcccgggctg cgcgacgtcg agcgcttcat
     2461 gaagcactac ttcctgatcg ccaaggacgt cggcgatctc accgccattc tctgcgccaa
     2521 gctcgagaac aggcaggcca aggcgatgcc ggtgctcagc cgcatgatgg cgagattcct
     2581 gccgcgccag cggcacacgc tgagcgagac cgaggatttc gtcgtcgact acaaccgcat
     2641 caatgtcgcc gacgagaacg tgttcaagcg cgatcccgtc aacctgatcc gcatcttcca
     2701 tctcgcgcag aaatacaatc tggcgttcca tcccgacgcc atgcacctgg ccacgcgctc
     2761 gctcaggctg atcgatcagg gattgcgcga gaatgaagag gcgaaccggc tgttcctgga
     2821 gatcctcacc tcgaagaacg acgccgaaac ggtgctgcgg cgaatgaacg aagcgggggt
     2881 gctcggcacc ttcgtgcccg ccttcggccg catcgtcgcg atgatgcagt tcaacatgta
     2941 ccaccattac acggtggacg agcatctcgt gcgctgcatc ggcgcgctgt ccgacatcga
     3001 ggccggccgc gccgaggacg ccaaattcgc caccgagctg atgcgcacca ttcagccgcg
     3061 gcaccgcgac ctgctctacg tggcgatgtt cctgcacgac atcgccaaag gccgcgtcga
     3121 ggatcattcc atcgccggcg cgcgcatcgc gcgccacttc tgcccgcggc tgggcttcac
     3181 gccggcggag accgaaaccg tcgcctggct catcgaggtg cacctgctga tgtcgacggt
     3241 cgcccagtcg cgcgaccttt ccgaccgcat gacgatcgag cacttcagcg ccgtgatcca
     3301 gtcggtcgag cggctcaagc tcctcaccat cctcaccgcc gccgacatca aggcggtcgg
     3361 gccgggggtg tggaacggct ggaaggcgca gctcatttgc acgctctact acgaaaccga
     3421 accggtgctc a
//
LOCUS       DATCWM010000288         2311 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_18505, whole genome shotgun sequence.
ACCESSION   DATCWM010000288 DATCWM010000000
VERSION     DATCWM010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2311
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18505"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..407
                     /locus_tag="VIQ50_05525"
     CDS             <1..407
                     /locus_tag="VIQ50_05525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY9359873.1"
                     /translation="RREAELRTPARAALARVGLAAREDVIVSNLSHGEHRQLEIAMAL
                     ATTPRMLLLDEPMAGMGPDESARMVKTLRELKRGLTILLIEHDMEAVFALADRITVLV
                     YGRIIASGSPEAIRANAEVRQAYLGDQEDGHG"
     gene            400..1116
                     /locus_tag="VIQ50_05530"
     CDS             400..1116
                     /locus_tag="VIQ50_05530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9359874.1"
                     /translation="MASASLLEVANIETCYGLSQVLFGVSLAIAPGEVVTLMGRNGMG
                     KTTTVRSIMGLTPAMTGSIRFGGREIRGLPAYQVAKLGIGLVPEGRQVFPNLTARENL
                     IATAANRSRAAAPWTLDKVCELFPRLAERTANMANQLSGGEQQMLAIGRALMTNPRLL
                     ILDEATEGLAPLIRAEIWQCLTRLKAAGQSILVIDKNVAALIRIADRHYLIERGKVVW
                     TGSSSELAAAPAVQHRYLGV"
     gene            1233..2108
                     /locus_tag="VIQ50_05535"
     CDS             1233..2108
                     /locus_tag="VIQ50_05535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359875.1"
                     /translation="MGKHEIIEDTGAPSEAEGSGAPASEPPASKTSKMALASAEASEI
                     AAPKNEAAAVESAATTVPPQADIEQRKPSRGKDAADAEEALPGAGEETPRVSRFALLA
                     AALALAAALGAMVGALAAYGIARPAATAAEAGRTGMDEVQALKENIVQTRVELAALKL
                     SINTATRNAATQFTKIGERIDRVERAQAEPVAKLNKAIDAIERLSRGEAASAAKDVTG
                     AILPAAGLPKGAAVEGWVVRDVHRGTALLEGRMGLIEVDQGDVVPGLGRVDAIRKQDG
                     RWVVVTPRGLIMPPR"
BASE COUNT          393 a          783 c          794 g          341 t
ORIGIN      
        1 cccgccggga agctgagctg cgcacccccg cgcgtgcagc gctggcgcgc gtcggacttg
       61 ccgcacggga ggacgtgatc gtctccaatc tcagccacgg cgagcaccgc cagctcgaga
      121 tcgccatggc gcttgccacc accccgcgca tgctcttgct cgacgagccg atggcgggca
      181 tgggaccgga cgaaagcgcg cgcatggtca agacgctgcg cgagctcaag cgcggcctga
      241 cgattctttt gatcgagcac gacatggaag ccgtgttcgc gctggccgac cggatcaccg
      301 ttctggtcta tggccgcatc atcgcctccg gctccccgga ggcgatccgg gccaatgccg
      361 aagtgcggca ggcctatctc ggcgatcagg aagacggtca tggctagcgc ctcgctgctc
      421 gaggtggcga acatcgagac ctgctacggg ctgagtcagg tcctgttcgg cgtgtcgctg
      481 gcgatcgcgc cgggcgaggt ggtgacgctc atgggccgca acgggatggg caagaccacg
      541 accgtgcgtt cgatcatggg gctcaccccg gcaatgaccg gctccatccg tttcggcgga
      601 agggaaatcc gcggcctccc cgcctatcag gtcgccaagc tcggcattgg gctggttcct
      661 gagggccgcc aggtcttccc caatctcacg gcgcgggaga atctgatcgc gaccgcggct
      721 aaccgcagca gggcggcggc gccctggacg ctggacaagg tgtgcgagct gtttccgcgg
      781 ctggccgagc gcaccgccaa tatggcgaac cagctctccg gcggcgaaca gcagatgctg
      841 gcgatcggtc gcgcgctcat gaccaaccct cggctgctga tcctggacga agcgaccgag
      901 ggtctcgcac cgctcatccg cgccgaaatc tggcagtgcc tcacgcgcct caaggccgcc
      961 ggccagtcga ttctggtgat cgacaagaac gtcgcggcgc tgatccgcat tgccgatcgc
     1021 cattacctga tcgagcgcgg caaagtcgta tggactggca gttccagtga gcttgccgcc
     1081 gcgccggcgg ttcagcaccg atatctgggc gtgtgacgcc gttatcggcg cggcacgccc
     1141 gccttcccga ggggagcgcg ctttaacccc caaacgataa ccagttggta accgcgatgc
     1201 ggtccaattc gccgccgcat cgaggacgct ccatgggtaa gcacgagatc atcgaggaca
     1261 cgggcgcgcc gtccgaggcc gaaggctcgg gcgcgccggc aagcgaaccg cccgcaagca
     1321 aaacctccaa gatggcattg gccagcgcgg aggccagcga gatcgcggct cccaagaacg
     1381 aagccgccgc ggtcgagagc gccgccacaa cggtgccgcc gcaggcggac atcgagcaac
     1441 gcaagccgtc ccgcgggaaa gatgccgcgg acgcggaaga ggcgctgccg ggggctggcg
     1501 aggagacgcc tcgtgtcagc cgatttgcgt tgttggcggc tgcgcttgcg ctggccgccg
     1561 ccctcggcgc catggtcggc gcgctggccg cctacgggat cgcccggcct gcggccacgg
     1621 cggcagaggc gggccgaacg ggcatggacg aagtccaggc gctcaaagag aacatcgtgc
     1681 agacgcgggt cgaactcgct gcgttgaagc tgagcatcaa taccgccacc cgcaacgccg
     1741 cgacccaatt caccaagatc ggtgagcgca tcgaccgcgt cgagcgcgct caggccgaac
     1801 cggtcgccaa gctgaacaag gcgatcgacg cgatcgagcg tctgtcccgc ggcgaggccg
     1861 catccgctgc caaagatgtg accggggcga tcttgccggc ggcggggctc cccaagggcg
     1921 cggcagtcga aggctgggtg gtacgcgatg tccatcgcgg gaccgccctg ctggaaggcc
     1981 gcatgggcct catcgaggtc gaccagggcg acgtcgtgcc gggactgggg cgtgtggacg
     2041 caatccgcaa gcaggacggc cgctgggtcg tggtgacccc gagaggcctg atcatgccgc
     2101 cgcgctgatc gaaagatcgc cggatccctc gcgccaacga ccctgctgca acgtgtgacg
     2161 gctttcgctt tcgcccgccc gggcgtggcg gcgcaccccc gatccgtggc aaatttcccc
     2221 gcgcctcgct cgccgtgggt gtccgcggct cgcacggaag gattgctcga tgcccgacat
     2281 cgctcgtgtc gttcggacgg cggcgctcgc t
//
LOCUS       DATCWM010000289         2307 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_169691, whole genome shotgun sequence.
ACCESSION   DATCWM010000289 DATCWM010000000
VERSION     DATCWM010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2307
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169691"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..193
                     /locus_tag="VIQ50_05540"
     CDS             <1..193
                     /locus_tag="VIQ50_05540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359876.1"
                     /translation="VLDGGPGNNILIQSATTNFPASAALLGQFMASTFVPAGDGESGT
                     PVADALGSQQQPLLTQPHA"
     gene            complement(300..1139)
                     /locus_tag="VIQ50_05545"
     CDS             complement(300..1139)
                     /locus_tag="VIQ50_05545"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9359877.1"
                     /translation="MISSEDTPPRRVLPAPQPTSAQRLRDVLLSPNAIRMASVAVFFV
                     IWEYYGRRMDPIFMAPPSAIFEAALQLIQSGALAKALIQTLWPFSVGMALTVVVGIAL
                     GIAMAQWRTLEYVLDPFINALYAIPRIALIPLIILWAGLEFVGKVTILVSVAVFPIIV
                     NTYSGIRDVRGAMLEIGRAYGATEWQIFWKIVLPAAIPFIMAGIRLAVGLAIIGIIVA
                     EFFTAISGLGGMIVEYSNVFATAKLFVPIIVIALVGVVLTELVMWLERRMSRWRQLER
                     ERF"
     gene            complement(1136..1939)
                     /locus_tag="VIQ50_05550"
     CDS             complement(1136..1939)
                     /locus_tag="VIQ50_05550"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9359878.1"
                     /translation="MTNAPAASMVVYDGVSKFFPVRVRSVRNDRPELMVALDRINATV
                     RKGELVTLLGPSGCGKTTLLRLTAGLIASDEGRITIAGVSVTGARKDACMVFQNFGLL
                     PWRTVLGNVEFPLEIGGVGAAERRDVARHFIELVGLAAFTEHFPHELSGGMQQRVGIA
                     RALMRKPILIFMDEPFGALDAQTREQLQEDFLAIWSRTGATVIFVTHSIDEALILSDR
                     IFVFDTAPGRLHAVVDSPVAGERLGGDVRTHPDFGKCRAELRNMLRSEP"
     gene            complement(1948..>2307)
                     /locus_tag="VIQ50_05555"
     CDS             complement(1948..>2307)
                     /locus_tag="VIQ50_05555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359879.1"
                     /translation="NVVRTEALTKPELAAAFQIMMDIGIQGSRFIMANPDEAAAILHQ
                     RLGDLDLTFLKAVVRDLNSENVWGVDGGLDPAIEEFTADLNMKLGNLPVAAPAKDVLE
                     PRFVDRALAKLGTYQKK"
BASE COUNT          453 a          754 c          736 g          364 t
ORIGIN      
        1 cgtcctcgac ggcgggcctg gcaacaacat cctcatccaa tcggccacga ctaacttccc
       61 cgcctcagcc gccctgctgg gccagttcat ggcctcgacc ttcgtccccg caggggacgg
      121 cgagagcggc acacccgtcg ccgatgcgtt ggggagtcaa cagcagccgc tgctcacgca
      181 gccccacgcc tgagcaccac ctcgccccgg agagcgcaac atgctgcgcg agcggtaagg
      241 ctgttgcggg cgcgcgaccc acacggcgtc gcaagcatcg cactcgggat gagcaaatct
      301 caaaaccgtt cgcgctcgag ctggcgccag cgcgacatcc gccgttccag ccacataacg
      361 agctcggtca gcaccacgcc cacgagggcg atgacgatga tcggcacgaa cagtttggcg
      421 gttgcgaaca cgttggaata ctccacgatc atgccgccga ggccgctgat cgcggtgaag
      481 aactcggcga cgatgatgcc gatgatcgcc aggccgaccg cgagccggat accggccatg
      541 atgaagggga tcgccgccgg cagaacgatc ttccagaaaa tctgccattc cgtcgcgccg
      601 tacgcgcgtc cgatctccag catcgctccc cgcacatcgc gaatgccgga ataggtgttg
      661 acgataatgg ggaacaccgc gaccgagacc aggatcgtga ccttgccgac gaattccaag
      721 ccggcccaca ggatgatcag cgggatgagg gcgatgcgcg ggatggcgta aagcgcattg
      781 atgaaggggt cgagcacgta ttccagtgtg cgccactgcg ccatggcgat gccgagcgcg
      841 atgccgacta cgacggtgag cgccatgccg accgagaacg gccacaaagt ctgaatgagc
      901 gcctttgcga gagcgccgct ttggatgagc tgaagcgcgg cctcaaagat cgcactcggc
      961 ggcgccatga agatcggatc catgcggcgg ccgtaatatt cccagatcac gaagaagacc
     1021 gcgaccgagg ccatgcggat cgcgttcggg ctcaacagca cgtcccgcag ccgctgcgct
     1081 gatgtcggct gcggcgccgg cagcacccga cgaggcggcg tatcctctga cgaaatcatg
     1141 gttcgctcct gagcatgttg cgcaactcgg cgcggcattt tccgaaatcg ggatgcgtgc
     1201 ggacgtcgcc gcctagacgc tcgccggcaa ccggggagtc gacgacggca tgaagccgtc
     1261 cgggggcggt gtcgaagacg aagatgcggt cggagaggat gagcgcctcg tcgatgctgt
     1321 gggtgacgaa aatgacagtc gcgccggtgc gcgaccatat cgccaggaaa tcctcctgca
     1381 actgctcgcg tgtctgcgcg tccagcgcgc cgaacggctc atccatgaag atgagaatgg
     1441 gcttgcgcat cagcgcgcgc gcgatgccga cccgctgctg catgccgccg gacaactcgt
     1501 gaggaaagtg ctcggtgaaa gcggcaagtc ccaccagctc gatgaaatgc cgcgccacgt
     1561 cgcggcgctc ggccgcgccc acgccgccga tctcgagcgg aaactcgacg ttgcccagaa
     1621 cggtgcgcca cggcaacagg ccgaaattct gaaacaccat gcacgcgtcc ttgcgcgcgc
     1681 cggtcaccga caccccggcg atggtgatgc ggccctcgtc cgacgcgatg agcccggcgg
     1741 tgagccgaag caacgtcgtc ttgccgcacc cgcttggccc gagcagcgtg accaactcgc
     1801 cctttcgcac cgtcgcattg atgcggtcga gcgccaccat cagttccggt cgatcgttac
     1861 ggaccgagcg gacgcgaacc ggaaagaatt tgctgacgcc gtcgtaaacg accatgctgg
     1921 ccgccggcgc gttcgtcatg gggcccgcta tttcttttga taggtgccga gcttggcgag
     1981 cgcgcggtcg acaaagcgcg gctcaagcac gtccttggcc ggcgccgcca ccggaagatt
     2041 accgagcttc atgttgagat cggcggtgaa ctcctcgatc gccggatcga gtcccccgtc
     2101 gacaccccag acattctcgc tgttgagatc gcggaccacc gccttgagga acgtcaagtc
     2161 gagatcgccc agccgctggt gcaggatggc ggcggcctcg tcgggattgg ccatgatgaa
     2221 gcgcgatcct tggatgccga tatccatcat gatctggaac gcggcggcga gctccggctt
     2281 ggtgagcgct tcggtgcgca cgacgtt
//
LOCUS       DATCWM010000290         3340 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_131761, whole genome shotgun sequence.
ACCESSION   DATCWM010000290 DATCWM010000000
VERSION     DATCWM010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3340)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3340)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3340
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131761"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..907)
                     /locus_tag="VIQ50_05560"
     CDS             complement(<1..907)
                     /locus_tag="VIQ50_05560"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359880.1"
                     /translation="MSHIPLRLRAIGPTLCLVAALLTLEASAAAATKIKMVFPGPVTT
                     FSLPYLVAQKKGWMADLEVEDVHVTGDANAMRVLLSGNADIGLIGTLNVLASIHAGAG
                     IRAVHSWQPIGDYSLVLATGKGDKLADLAGKTFASSGPGGLPDQLPRLIMRKHGIDET
                     SARFVQIGGHAARLQAVIGGRADATLVNTVTALKGVQEGKVTVVARLSAEFPGLGYVW
                     NVVRTEALAKPELAAAFQTMTDIGIRGSRFVMANPDEAAAILHERLGDLDLAFLTAVV
                     RDLNGENVWGVNGGLDPAIEEFTADL"
     gene            1119..2111
                     /locus_tag="VIQ50_05565"
     CDS             1119..2111
                     /locus_tag="VIQ50_05565"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9359881.1"
                     /translation="MAWRKALTAIITIAVITAVGAALLGRATQAQAQLWPQRPVRIIV
                     PYTAGGNSDGMARMVAQRLGDAFGQTFVVENRLGANGAIATEAVARSGADGYTLLWAV
                     TPPVSINPALMKVNYDPIKDFAPISAVAVNAFVLVVNKSFPPKTVAEFVAYVRAQPNQ
                     LSYSESGVGSLTHLAMALFLKRAGLQMTNVSYRGNAPALTDVVAGHLPTMFSNIADAI
                     PQATAESIRLLAVSSKERAPQLPDIPTVAESGFPGFNVLTWNGLMAPAGTPKDIVDKI
                     AAEIGHSVKDPQFAARLDQYGVDPLGNTPAEFRAMVAADTQLWAETVQSLGLKF"
     gene            2113..>3340
                     /locus_tag="VIQ50_05570"
     CDS             2113..>3340
                     /locus_tag="VIQ50_05570"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY9359882.1"
                     /translation="MPASQRPVLIAGAGPVGCIAALALARQGLPVHVFEAQPRVNDSP
                     RAATTHAATLEMLAELGLVDEVIRRGLIEPKFRIWDRASREIIAEFDFGALKDDTRFP
                     YVVQCEQHKLADMATERLRRLSQARVDFSSRVTELRQFDDRVEVLVEDARGTHKFDGS
                     YLIGADGGRSTIRKALGTAFEGYTHPERFLVLTTTFSFDAEHAHCSRNYFSDPDEWCA
                     LFKVAGDDGNGLWRVLFPTRADETDAQALDADAVEGRLQKFFPNSGRYPVVHRNLYNV
                     HQRVAASFGSGRVFLAGDCAHVNNPLGGLGLNFGIHDAVELSTLLGRVLRGEEPAHIL
                     EQYDRFRRPLNIEYVQQQTIANKKRLEEKDPAIRAKNNEALRRTAADPVAHRAYLLRA
                     SLIDSVRKRGHGGVGSR"
BASE COUNT          639 a         1055 c         1050 g          596 t
ORIGIN      
        1 tgaggtcggc ggtgaattcc tcgatcgccg gatcgagccc gccgttcacc ccccagacat
       61 tctcgccgtt gagatcgcgc accaccgccg tgagaaacgc caggtcgaga tcgccgagcc
      121 gctcgtgcag aatcgccgcg gcctcgtcgg gattggccat gacgaagcgc gatccgcgga
      181 ttccgatgtc ggtcatggtc tggaaggcag cggcaagctc gggtttcgcg agcgcttcgg
      241 tgcgcacgac gttccagacg tagcccaatc ccggaaattc cgccgacagt ctcgccacca
      301 ccgtgacctt accctcctgg acgcctttga gcgcggtgac ggtattgacc aacgtcgcat
      361 cggcgcgacc gccgatcacg gcctgcagac gggcggcgtg gccaccgatc tggacgaaac
      421 gcgcactcgt ttcgtcgata ccgtgcttgc gcatgatcag gcggggcagc tgatcgggca
      481 ggccgccggg gccggacgat gcgaaggtct tgccggcgag atcggcgagc ttgtcccctt
      541 ttcccgtcgc caacacgaga ctgtagtcgc cgatcggctg ccaggagtga acggcgcgga
      601 tgccggcgcc ggcgtggatc gacgcgagca cgttaagcgt gccaatgagg ccgatatcgg
      661 cgttccccga gagcagcaca cgcatggcgt tggcatcgcc ggtgacatga acgtcctcga
      721 cctcgagatc ggccatccag cctttcttct gcgcgacgag atagggcagc gaaaacgtcg
      781 tgaccggccc cgggaacacc atcttgatct tcgtcgcggc ggcggcggac gcctcgaggg
      841 tcaggagcgc cgccacgagg caaagggttg ggccgattgc gcgcaaccga agaggaatgt
      901 gagacatgac acctcccgca gagttacaaa ttcagaaaag gatgtcgatt agctcatcgt
      961 tagtttgcga ctcgcaatcg aatatcaact cgggagacat gacgcccgtg cgcagatcca
     1021 ccgacgattt ggaaaaatga gcctttcgga ctattcatgc aatagtttct cggccgtcgg
     1081 cggatcgggg aactgctttg cagctgggac gaatgacgat ggcttggcga aaggcattaa
     1141 cggcaatcat tacgatcgca gtgatcacgg cggtcggagc ggcgctgctt ggccgcgcca
     1201 cgcaggcaca agcgcaactt tggccgcagc ggccggtccg catcatcgtg ccatacaccg
     1261 caggcggcaa ttccgacggg atggcgcgga tggtcgcaca gcggctgggc gatgcgttcg
     1321 gccagacctt cgtggtggag aatcgtctcg gtgccaatgg cgcgattgct accgaggcag
     1381 tggcccgttc gggggcggat ggatacacgc tcctgtgggc tgtgacgccg cccgtctcca
     1441 tcaatccagc gctcatgaag gtcaactacg atccgatcaa ggatttcgcg ccgatcagtg
     1501 cggttgccgt caacgcattc gtgctggtgg tgaataagag ctttccaccc aagacagtcg
     1561 ccgaattcgt cgcatacgtg cgcgcacagc cgaaccagct ctcttattcc gagagcggcg
     1621 tcggcagcct gacgcatctc gccatggcac tgttcctcaa acgcgccggg ctgcagatga
     1681 cgaacgtcag ctaccgcggc aatgcgccgg cgctcaccga cgtggtggcc ggacatctgc
     1741 ccacgatgtt ctccaacatt gctgatgcaa tcccgcaggc tacggccgag tcgattcgac
     1801 tgcttgccgt gtcaagcaaa gagcgtgccc cgcagctgcc cgacattcca accgtggccg
     1861 aatccggctt tcctggcttt aacgtgctca cgtggaacgg actgatggcg ccggcgggaa
     1921 cacccaaaga catcgtcgac aagattgcgg ccgagatcgg ccactccgtc aaggacccgc
     1981 aattcgcagc gcggcttgac caatacggtg tcgaccccct cggcaataca cccgcggaat
     2041 tccgcgccat ggtcgccgcg gatacgcagt tgtgggccga gacggtgcaa tcgctcggat
     2101 tgaagttcta agatgccggc aagccagcgt ccggtattga ttgccggcgc cgggccggtc
     2161 ggatgcatcg ccgcgttggc gctcgcgcgc cagggcctcc cggtccacgt cttcgaggcg
     2221 cagccgcgcg tcaacgacag tccgcgcgcc gcgaccacgc acgcagcgac attggaaatg
     2281 ctggccgagc taggcctggt ggacgaggtc atccgccgcg ggttgatcga gccgaagttt
     2341 cgcatctggg accgggcaag ccgcgagatt atcgccgagt tcgacttcgg cgcgctcaaa
     2401 gacgacaccc gctttcctta tgtcgtgcaa tgcgagcagc ataagctcgc cgacatggcg
     2461 accgagcgcc tgcgccgcct ttcccaggcc agagtggatt tttcctcacg ggtcacggag
     2521 ctgcggcagt tcgatgaccg ggtcgaggtg ttggtcgagg acgcgagggg cacgcacaag
     2581 ttcgatggat cgtacttgat cggcgcggac ggcggtcgct ccacgatacg caaggcgctc
     2641 ggcaccgcct tcgaggggta tacgcatccg gagcgtttcc tggtcttgac cacaaccttc
     2701 tccttcgacg ccgaacatgc gcactgctcc cgcaattact tttccgatcc cgacgaatgg
     2761 tgcgctctgt tcaaggtcgc gggagacgat ggcaacggcc tttggcgggt gctctttcct
     2821 actcgagcgg acgagaccga cgcgcaagcg ctggatgcgg acgcggtcga ggggcggctg
     2881 caaaaattct tccccaacag cggtcgttat cccgtcgttc atcgcaacct ctacaacgtg
     2941 caccagcgcg tcgccgcgtc attcggcagc ggtcgcgtgt ttctcgcggg agattgtgcc
     3001 cacgtgaaca acccgctcgg ggggctcggc ctcaacttcg gcattcacga cgccgtggag
     3061 ttgtccacgc tactcggtcg cgtcctgcgc ggcgaggagc cagcgcatat cctcgagcag
     3121 tacgatcgct tccgtcggcc actcaatatc gaatatgtgc agcagcagac gatcgccaac
     3181 aagaaacggc tcgaagaaaa ggatccggca atacgggcca agaacaacga ggcactgcgc
     3241 cggaccgctg ccgatccagt tgcccaccgc gcctatctgc tgcgagcctc gttgatagac
     3301 agcgtgcgca agcgcggcca cggcggcgta ggcagccgtg
//
LOCUS       DATCWM010000291         2430 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_536618, whole genome shotgun sequence.
ACCESSION   DATCWM010000291 DATCWM010000000
VERSION     DATCWM010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2430
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_536618"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1535)
                     /locus_tag="VIQ50_05575"
     CDS             complement(<1..1535)
                     /locus_tag="VIQ50_05575"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HEY9359883.1"
                     /translation="MRSARQSAIRLLQLMMVASVVLPLVLFAFAAWLNYRHELTVADD
                     RIERSLDILHEHTLKVFQTVERAIAEVDEIVRGMPDDEIREQQPRLHERVKRIVDALP
                     QLRAIFLIDRDGQPLVSSLFVQVPPDLRSRERSFYSAHIAGDVGTFVSEVVAPRLAEF
                     GAPFFVLSRRRPSDHGAFNGVIAVAVLPQYFEEFYTLIGRGPGELYALIRADGRFLAR
                     YPQSPDRLRAVGPGLETALAQGSEREVRTGRSQIDGAERRIGFRRLEGFPVYAIAGIA
                     TSAIQKEWTATMASHLVYGLPATLFILLILAIALRRTRRLHDEAERREAAEAALRQAQ
                     RLEAIGQMTGGVAHDFNNLLMVVSGSAERLRRDLTSEKHRRLLDMIMNATSRGESLTR
                     QLLAFSRRQMLTPMVMDLAQRIPDLNDMLNRSLRDDITLEVAVPEQACTVKADPSELE
                     LALLNLAVNARDAMPNGGTLRISVEPVALDGKPAEDGLSGDFVAIRVADTGSGIAPEV
                     LPHV"
     gene            complement(1831..2034)
                     /locus_tag="VIQ50_05580"
     CDS             complement(1831..2034)
                     /locus_tag="VIQ50_05580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359884.1"
                     /translation="MNGSPRCCMFCGEAFRPRDGYVEFWRTSAGQHFCSEFCADDAEE
                     ALFRKRHAGAGGRAALVVGATHL"
     gene            2033..2221
                     /locus_tag="VIQ50_05585"
     CDS             2033..2221
                     /locus_tag="VIQ50_05585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359885.1"
                     /translation="MRYLLLVSIGISPHLRGAGSSIVTSDSLIVDYQPLGKSLFSSGL
                     GAEAPELEPEMSGRERPV"
BASE COUNT          429 a          783 c          815 g          403 t
ORIGIN      
        1 acgtgcggca gaacctcggg cgcaatcccg ctgccggtat cggcgacgcg gattgccacg
       61 aagtcgccgc tgagcccgtc ctccgccggc ttgccgtcga gcgccaccgg ctcgacgctg
      121 atccgcagcg ttccgccgtt cggcatggcg tcgcgcgcat tcaccgccag attgagcaag
      181 gcgagctcga gctcgctcgg atcggccttg accgtgcacg cttgctcggg aaccgcgacc
      241 tccagcgtga tgtcgtcgcg cagcgagcgg ttgagcatgt cattgaggtc gggaattcgc
      301 tgcgcgagat ccatcaccat cggcgtgagc atctgccggc gcgagaacgc gagcaattgc
      361 cgcgtgagac tttcgccgcg actggtcgcg ttcatgatca tgtcgagcag gcgccggtgt
      421 ttctccgaag tcaggtcgcg gcgcaggcgc tccgcgctgc cgctgacgac catgagcagg
      481 ttgttgaagt cgtgcgcgac cccgccggtc atctgcccga tcgcttccag ccgctgggcc
      541 tgccgcaatg ccgcctccgc cgcttcgcgc cgctcggctt cgtcgtggag gcggcgcgtg
      601 cgccgcagcg cgatggcgag gatgagcagg atgaacagcg tcgcaggcag cccgtagacg
      661 agatggctcg ccatggtcgc ggtccactct ttttggatcg ccgaggtggc gatgccggcg
      721 atcgcgtaca cgggaaagcc ctcaagcctg cgaaagccga tccgccgctc ggccccatcg
      781 atctgcgaac ggccggtgcg gacctcgcgc tccgaccctt gcgcgagtgc cgtctccagg
      841 ccgggaccga cggcgcgcag gcggtccggc gattgcggat agcgggcgag aaacctgccg
      901 tccgcgcgga tgagcgcgta gagctcgcct gggccgcgcc cgatgagcgt gtagaactcc
      961 tcgaaatact gcggcaggac cgcgacggcg atcacgccgt tgaacgcacc gtggtcggac
     1021 ggacgtcggc gcgaaagcac gaaaaagggc gcgccaaact ccgcgagccg cggcgccacg
     1081 acttcgctga caaaagtgcc gacatcgccg gcaatgtgcg cgctgtagaa gctgcgctcg
     1141 cgggagcgca ggtcgggcgg cacctgcacg aataggctgg agacgagcgg ttggccgtcg
     1201 cggtcgatga gaaagatcgc gcgcagctgc ggcagcgcat cgacgatgcg cttcacgcgc
     1261 tcgtgcaggc gcggctgctg ttcgcggatc tcgtcatccg gcatgccgcg aacgatctcg
     1321 tcgacctcgg cgatggcgcg ctcgaccgtc tgaaacacct tgagcgtgtg ctcgtgaagg
     1381 atatcgagcg aacgctcgat gcggtcgtcg gcgacggtca gctcatggcg gtaattcagc
     1441 caggcggcaa aagcgaacag cacgaggggc aacacgaccg atgcaaccat catcagctgc
     1501 agcagtcgaa ttgccgattg gcgcgcggaa cgcattgcac atgattccac caaaccgcaa
     1561 cggcgacgac gagtatccgt ttcggtcggc cgcccccggc cttgcgaaga agctcgctgc
     1621 cgccgcatta gcgctgcgat ttggcttaaa tttagtccgc aattgctcgc cggcccagcc
     1681 ggaggcgccg tcaagggcgt cggcgtgtgg ttgcgtcgcc cacccgacag atcgcggcgc
     1741 aaccgggcga gggcaggagc ggacgcaata gcgccgctcg cgagcggctt gcgagactga
     1801 cttaacttat aagtagctta cgaaatcggc tcagagatgg gtcgcgccga caacgagcgc
     1861 ggcccgcccg cccgctccgg cgtggcgctt gcggaagagc gcctcctcgg cgtcgtcggc
     1921 gcaaaactcc gagcaaaaat gctgcccggc ggatgtgcgc cagaattcga cgtagccgtc
     1981 gcgcggccgg aaggcctcgc cgcagaacat gcagcagcgg gggctgccgt tcatgagata
     2041 cctgctgctg gtcagcatcg gaatctctcc acatttgcgc ggtgctggca gctcgatcgt
     2101 gacctccgat tcgttaatcg ttgattacca gcccttggga aaatcgctct tttcctccgg
     2161 tttgggggca gaagcgccgg aacttgagcc cgaaatgtcg ggtcgcgaac gcccggtgtg
     2221 acaaattaac cacacaaaaa ccaaaccacg tcacggcggg ggatttggcc gtgatcgggc
     2281 catggtttgc acccccatta gcggcgggac atcggtgggg agtgcgaacg tgtcaatcat
     2341 caattcgtct ttgtgcgccg ggaccggcgc cgaacgccgg ccttcgggcc tcgcaatggt
     2401 gcggcttttc gcagcggcgc tgactgcggc
//
LOCUS       DATCWM010000292         2203 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_320881, whole genome shotgun sequence.
ACCESSION   DATCWM010000292 DATCWM010000000
VERSION     DATCWM010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2203
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_320881"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1325)
                     /locus_tag="VIQ50_05590"
     CDS             complement(<1..1325)
                     /locus_tag="VIQ50_05590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359886.1"
                     /translation="MNAELPKSDYARNMRILAHCDQGGRPDGVQIMVHRGHAYIGHMF
                     SKGFSVVDVRDAKRPRAVNYLAAPPNTWNIHLQTHDDVLLVVNAKDMFAAAEFADEKA
                     YYKGQLGNVVGTAERKSAARDWTAGLAVYDISTPAAPRRIGFMPVEGGGIHRIWYTGG
                     RWAYVSALLDGFTHYILLTVDMGDPAHPRECGRYWIPGMNAAAGETPSWPNTSRYGLH
                     HAIVDGDIAYAAWRDAGMAVIDVRDRARPTLITHRNWSPPFGGGTHNCLPLPQRDLLV
                     VLDEAVLDHQEDGLKLIWVFDNRTKANPVSISTFPTPAEADYVRKGGHFGPHNVRENR
                     PGSFVSSELIFATYQNAGVRAFDIRDPYRPREVGALAAGTRAHDGPPAQSRAGDPVGR
                     RVRRCRRPALLHRLQRRALHRRIRRLRWSGRARSASRLRSDRGPWLYRRR"
     gene            complement(1325..>2203)
                     /locus_tag="VIQ50_05595"
     CDS             complement(1325..>2203)
                     /locus_tag="VIQ50_05595"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEY9359887.1"
                     /translation="HLGHAFECVEQDGSGVLVHFAGGKRERADLLIGADGIRSSVREQ
                     VAPAVQPIYSGYYIWRGAPKEADLAKATRASIFPYFTFFLPERQQVIGYPIAGLNNDL
                     RVGHRRYNFIWYRVADAQELRRMCVDEDGRQHAHSVPPPLIRNDLIAQMRAEAQAIMP
                     PQFLDCLANMRPFFTPIYDFSTPQLVFGRVALVGDAASSARPHMGFGMAKAGGDAQAL
                     AAALDGQDDIDAGLAAYNRARQPIGERIVLHGRRLGTHLGVNLQSEEDRAMWKLLQDH
                     RAMMDWIAVPNFLAAY"
BASE COUNT          371 a          705 c          756 g          371 t
ORIGIN      
        1 cgccgcctat aaagccaagg gcctcgatcc gacctgaggc gcgacgcgga tcgcgcgcgg
       61 ccgctccacc tcagccgccg aattcgacga tgtagagccc ggcgttgtag tcggtgcaat
      121 aaagcaggcc ggcggcatcg acgaacacgt cggccgactg gatcacctgc gcgcgattgg
      181 gccggtggtc catcatgcgc gcgggtgccg gcggcgagcg cgccgacttc gcgcggccgg
      241 tacggatcgc ggatgtcgaa ggcgcgcacc cccgcgttct ggtaggtggc gaagatgagc
      301 tccgagctca cgaagcttcc cggccggttc tcgcggacgt tgtgcgggcc gaagtggcca
      361 cccttgcgca catagtcggc ctccgccggc gtgggaaagg tggagatgct caccggattt
      421 gccttggtcc ggttgtcaaa cacccagatg agcttgaggc catcctcctg gtgatcgagc
      481 acggcttcgt cgagcacgac gagaagatcg cgctgcggca gcggcaggca attgtgcgtg
      541 ccgccgccga acggcggcga ccagttgcgg tgggtgatca gcgtgggccg cgcgcggtcg
      601 cggacatcga tcaccgccat gccggcgtcg cgccaggcgg cgtaggcaat atcgccgtcg
      661 acgatcgcgt ggtgcaatcc gtagcggctc gtgttgggcc atgacggcgt ctcgccggcg
      721 gctgcgttca tgccggggat ccagtagcgc ccgcactcgc gcggatgcgc tggatcgccc
      781 atgtctaccg tcaggaggat gtaatgggtg aagccgtcga gcagcgcgga aacgtacgcc
      841 cagcggccgc cggtgtacca gatgcggtga atgccgccgc cttcgaccgg catgaagccg
      901 atgcgccgcg gcgccgccgg cgtggaaatg tcgtagactg cgagccccgc ggtccaatcg
      961 cgtgcggcgc ttttcctctc ggctgtgccc accacgttac cgagctggcc cttgtaatag
     1021 gccttctcgt cggcgaattc cgcggccgcg aacatgtcct tcgcgttaac gacgagcagc
     1081 acatcgtcgt gggtctgtag gtggatgttc caggtgttcg gcggcgcggc gaggtaattc
     1141 accgcgcgcg ggcgcttggc gtcgcgcacg tcgacgacgc tgaagccttt ggagaacatg
     1201 tggccgatgt aggcgtggcc gcgatgcacc atgatctgca cgccgtcggg cctgccgccc
     1261 tggtcgcaat gggcgaggat gcgcatgttg cgcgcgtaat cggatttcgg cagctccgca
     1321 ttcatcaata cgcggccaag aaattcggca ccgcgatcca gtccatcatg gcgcggtgat
     1381 cctgcaacag cttccacatc gcgcgatctt cctcgctctg caaattgacc ccgagatgcg
     1441 tgccgagcct gcgcccgtgc agcacgatcc gctcgccgat cggctggcgc gcgcgattat
     1501 aagccgcgag tccggcatcg atatcgtcct ggccgtcgag cgcggcggcg agcgcctggg
     1561 cgtcgccgcc cgccttggcc atgccgaagc ccatgtgcgg acgcgccgag gaggcggcat
     1621 cgcccaccag cgccacgcgt ccgaacacca attgcggtgt cgagaagtcg tagatcggcg
     1681 tgaagaaggg acgcatgttg gcaaggcaat cgaggaactg cggcggcatg atcgcttgcg
     1741 cctctgcgcg catctgcgcg attaaatcgt tgcggatgag cggcggcggc acggaatgcg
     1801 cgtgctgtcg gccgtcctcg tcgacgcaca tccgtcgcag ctcctgcgca tcggcgacgc
     1861 gataccagat gaaattgtag cggcgatggc ccacgcgcag gtcattgttc agcccggcga
     1921 tgggatagcc gatgacctgc tgacgctcgg gcaggaagaa ggtgaagtaa ggaaaaatgc
     1981 tggcgcgcgt cgctttcgcg agatcggctt ccttcggcgc gccgcgccag atgtaataac
     2041 cggaatagat cggctgcacc gccggagcaa cctgctcgcg cacgctcgag cggatgccgt
     2101 ctgcaccgat gaggagatcg gcgcgctcgc gcttgccgcc ggcgaagtgc accagaaccc
     2161 cggagccgtc ctgctcgacg cactcgaacg cgtggccgag atg
//
LOCUS       DATCWM010000293         2146 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_293967, whole genome shotgun sequence.
ACCESSION   DATCWM010000293 DATCWM010000000
VERSION     DATCWM010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2146
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_293967"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            219..521
                     /locus_tag="VIQ50_05600"
     CDS             219..521
                     /locus_tag="VIQ50_05600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019904876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359888.1"
                     /translation="MFAINPLIALGVVASTAATDAAYVFFTAAVTSRRRVWAANWSAV
                     WYMLSAFAVISYTENAFYVVFAALGSWLGAYASMTWLRHAQSLPLPLHDLPRHDPP"
     gene            complement(563..1723)
                     /locus_tag="VIQ50_05605"
     CDS             complement(563..1723)
                     /locus_tag="VIQ50_05605"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HEY9359889.1"
                     /translation="MKTSEDRILTTHTGSLPRPKPLIDLILAREQGRAVEAARFEAET
                     AKAVDEVIARQIAAGIDVVSDGEMSKPSYTTYIRHRVAGIAPDPRAAEKGHDIMIGRD
                     LLAHPDFADRRRNFADLPFPGCVGPLRYQDRSALDRDLTHLKTAANKAKPVDAFMTAP
                     SPGILTRFIINLHYPTEDAYVAALADVIKTEYRAIVEAGFLLQIDAPDLASARNNQYR
                     DLSDDEFRKIAERNIEALNAATADLPAERMRLHICWGNYEGPHTHDLPLTKIIDIAFK
                     ARPQAISIEAANPRHDHEWEDLKTIDIPDDKILIPGVIDSTTNFVEHPRLVAQRIGRY
                     AEVIDRERLIAGVDCGFGTSVRHDPMVADSIVWAKLRALSDGAAIASKRLWG"
     gene            1868..>2146
                     /locus_tag="VIQ50_05610"
     CDS             1868..>2146
                     /locus_tag="VIQ50_05610"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEY9359890.1"
                     /translation="MMLGHNRRMTGAECLADMLKGYGVTHVFHVPAVLRKTMAVMESR
                     TDIKRLHVHGEKAAAYMADGYARASGRPGICAAQVIGALNLAAGLRDAW"
BASE COUNT          354 a          673 c          711 g          408 t
ORIGIN      
        1 gcacaatctc aactgaccaa aacccggcaa gccggggttt ggttggggga ggggagcaac
       61 gagtgcgcgg tcagtccaac cctcccaaca aagggcaggg gagggtagga ccgagttcgc
      121 cccctgtgac gatttcatgt cacacgaacc tgccctaatg ccgtttgcca gaatcactgc
      181 aaatccatcg ccgagactca aacatgatct tcaacatgat cttcgccatc aacccgctaa
      241 tcgccttggg cgtcgtcgcc tccacggccg cgaccgacgc cgcctacgtg ttcttcaccg
      301 ccgccgtgac cagcaggcgc cgcgtctggg ccgcgaattg gagcgcggtc tggtacatgc
      361 tctcggcgtt cgcggtgatc agctataccg agaacgcttt ctacgtggtg tttgcggcgc
      421 tcggttcctg gctcggggcc tacgcctcga tgacttggct gcgccacgca caaagtctgc
      481 cgctgccgct ccacgatctg ccgcgccatg acccgccata gctttgcagc gtggtcatca
      541 tgctgctccc actcagacag gatcagcccc atagccgctt gctggcgatc gccgcgccgt
      601 cgctgagagc gcgcagcttg gcccaaacga tgctgtcggc caccattgga tcgtgccgga
      661 ccgaggtgcc gaaaccgcaa tcaacgccgg cgatgaggcg ctcccggtcg atcacctcgg
      721 cgtagcgacc gatgcgctgt gccaccaggc gcgggtgctc gacgaagttg gtggtcgagt
      781 cgatgacgcc ggggatgagg atcttgtcgt ccgggatatc gatggtcttc agatcttccc
      841 attcgtggtc gtggcgtgga ttggcggctt cgatgctgat cgcctgcggg cgcgccttga
      901 acgcgatgtc gatgatcttg gtcagcggca gatcgtgggt gtgcgggcct tcgtagttgc
      961 cccagcagat gtgcaagcgc atgcgctcgg caggcaagtc ggccgtcgcg gcgttgagcg
     1021 cttcgatatt gcgctcggca atcttgcgga actcgtcgtc gctcaggtcg cgatactgat
     1081 tattgcgtgc agaggcgagg tcgggcgcat cgatctgcag caggaagccc gcttcgacga
     1141 tcgcccgata ctcggtcttg atcacgtccg ccagcgccgc cacgtaggcg tcctcggtcg
     1201 gatagtgcag gttgatgatg aaccgcgtca ggatgccggg cgagggtgcg gtcatgaacg
     1261 cgtcgacggg ctttgccttg ttcgcggccg tcttgaggtg ggtgaggtcg cggtccagcg
     1321 cgctgcgatc ctgatagcgc aatgggccga cgcaacccgg aaacggcagg tcggcgaagt
     1381 tgcgccggcg gtcggcgaaa tccggatgcg ccaggagatc gcgcccgatc atgatatcgt
     1441 ggcccttctc ggcggcgcgc ggatccggcg cgatgccggc gacgcggtgc cgaatgtagg
     1501 tggtgtagga cggcttgctc atctcgccgt cgctgaccac gtcgatgccg gctgcgatct
     1561 gccgcgcaat gacctcgtca actgccttgg cggtttccgc ctcgaaccgg gcggcctcga
     1621 cggcgcggcc ttgctcccgc gcgagaatga gatcgatcag cggtttcggc cgcggtaggc
     1681 tgccggtgtg ggttgtgagg atgcggtcct cgctggtttt catgcagcac tccggcgtca
     1741 gggatggctg ggcggatcgt agctcgaatc gggtccttcc ttgccatcct ccgtccccat
     1801 gtcattctgc gccgcgcgcc gctcgcaaac caagcgtcgc cgcggacagg atcgaacggt
     1861 taaacccatg atgctcggac acaatcgaag aatgaccggg gcggaatgcc tcgccgacat
     1921 gctcaagggc tacggcgtca cccacgtctt ccatgtgccg gcggtgctgc gcaagaccat
     1981 ggcggtgatg gaaagccgca ccgacatcaa gcggctacac gtgcacggcg agaaggccgc
     2041 ggcctacatg gccgacggtt acgcgcgcgc atcgggcagg cccggcatct gcgccgcgca
     2101 ggtgatcggt gcgctcaatc tggcggccgg gctgcgcgat gcctgg
//
LOCUS       DATCWM010000294         2754 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_536638, whole genome shotgun sequence.
ACCESSION   DATCWM010000294 DATCWM010000000
VERSION     DATCWM010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2754)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2754)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2754
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_536638"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..559)
                     /locus_tag="VIQ50_05615"
     CDS             complement(<1..559)
                     /locus_tag="VIQ50_05615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEY9359891.1"
                     /translation="MPRLALPRLRGEPDARRVESLTEQAYRVVEEQIVTLQLKPGGIL
                     SEQSLSATTKFGRTPIREALQRLAREGLITILPRKGILVSDINPRNQLLLLEVRRELE
                     RLLSRTGAERATPVQRTGFQDIARGMDRAAKHKDDIAFMRLDRELNALVIEAAHNDYA
                     ARSMRLLQGLSRRFWYMHYREAADLP"
     gene            693..1061
                     /locus_tag="VIQ50_05620"
     CDS             693..1061
                     /locus_tag="VIQ50_05620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359892.1"
                     /translation="MPRHVVLALVLFVALLLSAALTALAASGHFPLEHRAASLRSGVG
                     RAILFGACAVSMLSLAVGVAVAWLVVPWPAAVIGAGAAALAAPLLLRPLPDAFVNGRA
                     ALVAFASASALLALGLVSLQ"
     gene            complement(1083..2711)
                     /locus_tag="VIQ50_05625"
     CDS             complement(1083..2711)
                     /locus_tag="VIQ50_05625"
                     /EC_number="1.1.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007801268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004470 - malic enzyme activity [Evidence
                     IEA];
                     GO_function: GO:0004471 - malate dehydrogenase
                     (decarboxylating) (NAD+) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
                     /protein_id="HEY9359893.1"
                     /translation="MSAPTHPTGYDLLRNPRLNKGTAFTQEERRAFGLEGLLPPAVTT
                     LALQVARRHAEIAAFDHDLQKYLVLSDLQARNETLYYAVLMSDPASYMPLVYTPTVGE
                     ACQTFAHIFREPRGMYLSIGARGRLKQLLSNWPEKDVRFIVVTDGERILGLGDLGAGG
                     MGIPIGKLSLYTACAGVPPQYCLPIVLDVGTNNQVLLDDPLYQGLRQHRVRGEEYLAF
                     VDEFVMAAQQLYPKCCIQWEDFANFNAVPILARYRDKICTFNDDIQGTAGVALAGIYG
                     ALRITGGKLAQQRFLFLGAGSAATGIAELISLAMEREGVDLAAARQRNALFDINGLLV
                     TSRTDLANFQKPFAQDVPAVSTFVEAVEALKPTGIIGVSTVPKLFNHDVIGAMARINQ
                     RPIIFPYSNPTSRSECSAEEAYRWSDGRAVFASGSPFPPVEIGGRYFVPGQGNNVYIF
                     PAMGMAVFATEAKRVTEEMFIVAARAVAEQVTEENLSTGLIYPPQSHILDASLHVAER
                     IAAYIFDQGLARVPRPDDVGALIHARAYRPVYSE"
BASE COUNT          455 a          857 c          915 g          527 t
ORIGIN      
        1 acggcaagtc ggccgcctcg cggtagtgca tgtaccaaaa tcgtcgcgac agcccctgca
       61 ggagcctcat cgagcgtgcg gcgtaatcgt tgtgcgccgc ctcgatcacc aatgcgttca
      121 gctcgcggtc gagccgcatg aaggcgatgt cgtccttgtg ctttgcggcg cggtccatgc
      181 cgcgggcgat gtcctggaat cccgtgcgct gcaccggggt tgcccgctcc gcgccggtgc
      241 ggctcaacag ccgttcgagc tcgcgccgta cctccaacag cagcagctgg ttgcgcggat
      301 tgatgtcgga aaccagaatg cccttgcgcg ggagaatggt aatgagccct tcgcgggcga
      361 gccgctgcag cgcctcacgg atgggagtgc gtccgaactt ggtcgtggcg gaaagcgact
      421 gctctgatag aatcccgccg ggcttgagct gcagcgtaac gatctgctct tcgaccaccc
      481 ggtaggcttg ctcggtcagg ctctccaccc gccgggcatc cggctcaccc ctcagccggg
      541 gcagcgccag cctcggcaac gcagtctgcc tgctccttgc tgtgcgatag accggcattg
      601 gtctgccttc cggatcgacg actgatatat gtgttgtata ttagagatag cgttcgggtg
      661 cgggtcaagg gacgaagcga gcgatcacag cgatgccgcg tcacgtcgtg cttgcgctcg
      721 tactgttcgt tgcgctgctg ctgtccgctg ccctgaccgc gcttgctgcg agcggccatt
      781 ttccgctcga acatcgtgcg gcgtcgctgc gctcgggagt aggccgcgcc atcttgttcg
      841 gggcctgtgc agtttcaatg ctctcgctcg ccgtcggcgt tgccgtagct tggctcgtgg
      901 tgccctggcc cgccgcggtg attggagccg gcgcggcggc gctggcggcg ccgctgctgc
      961 tgcggccgct tcccgatgct ttcgtcaatg gacgcgccgc ccttgtggcg ttcgccagcg
     1021 catcagcgtt gctcgctctc ggcctcgttt cgctgcaata gcgctgaacc cgctctttcc
     1081 gttcactccg agtagaccgg ccgatacgcg cgggcgtgga tcagcgcgcc gacgtcatcc
     1141 ggccgcggta ctcgggccag cccctgatcg aaaatgtacg cggcgatgcg ctcggcgacg
     1201 tgcagcgacg catcgagaat gtgactctgc ggggggtaga tcaggccggt cgagagattt
     1261 tcctcggtga cctgctcggc cacagctcgc gctgcgacga tgaacatttc ctcggtcacc
     1321 cgtttcgctt cggtggcgaa caccgccatc cccatagccg ggaaaatgta gacgttgttg
     1381 ccttgacccg gcacgaaata tcggccgccg atctcgaccg gagggaaggg actgccgctg
     1441 gcgaacacgg cgcggccatc ggaccagcga taggcctctt cggcgctgca ttcggaacgc
     1501 gaggtcgggt tcgaataggg gaagatgatc gggcgctggt tgatccgcgc catcgccccg
     1561 atcacgtcat ggttgaacag tttcggcacg gtgctcacgc cgatgatgcc ggtcggcttg
     1621 agcgcctcga ccgcctcgac gaacgtggac accgccggga cgtcctgcgc gaaaggcttt
     1681 tgaaaattgg cgaggtccgt gcgcgaggtc acgagcaggc cgttgatgtc gaatagagca
     1741 ttgcgctgcc gcgcggcggc gagatccacg ccttcccgct ccatcgccag gctgatcaac
     1801 tcggcgatac cggtcgcggc cgagcctgcg ccgaggaaca ggaagcgctg ctgcgcaagc
     1861 ttgcctccgg tgatgcgcaa tgcgccgtag atgccggcga gcgccacgcc ggcagtgccc
     1921 tggatatcgt cgttgaaggt gcagatcttg tcgcgatagc gcgccaggat cgggaccgcg
     1981 ttgaaattgg cgaaatcctc ccattggatg cagcatttcg ggtagagctg ctgcgcggcc
     2041 atgacgaact catcgacaaa ggcgagatac tcttcaccgc gtacgcggtg ctggcgcagg
     2101 ccctgataga gcgggtcatc gagcaggact tgattgttcg tgccgacgtc gagaacgatc
     2161 ggcagacagt attgcggcgg cacgccggcg caggcggtat agagcgagag cttgccgatc
     2221 gggatgccca tcccgccggc gccgaggtcg ccgaggccga ggatgcgctc gccgtcggtg
     2281 acgacgatga agcgcacgtc cttttccggc caattggaga gcagttgctt cagccgaccg
     2341 cgcgcgccga tggataggta catgccgcgc ggctcgcgga agatatgggc aaacgtctgg
     2401 caggcctcgc cgacggtcgg tgtatagacg agcggcatat agctcgccgg gtccgacatg
     2461 agcactgcgt agtagagagt ctcgttgcgg gcctgcagat ccgacaagac gagatatttc
     2521 tgcagatcat ggtcaaacgc ggcgatctcc gcgtgccggc gcgccacctg caaggccaac
     2581 gtggtgacgg ctggcggtaa taggccttcg aggccgaagg cgcgacgctc ctcctgcgtg
     2641 aacgccgtcc ctttgttgag acgcggattc cgcagcaaat cgtaaccggt gggatgcgtc
     2701 ggtgcggaca tcttcatagc tcgcggcagg gtcatgtttg attaccccgt cctg
//
LOCUS       DATCWM010000295         2683 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_471973, whole genome shotgun sequence.
ACCESSION   DATCWM010000295 DATCWM010000000
VERSION     DATCWM010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2683)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2683)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2683
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_471973"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(160..981)
                     /locus_tag="VIQ50_05630"
     CDS             complement(160..981)
                     /locus_tag="VIQ50_05630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate dehydrogenase"
                     /protein_id="HEY9359894.1"
                     /translation="MPSPVISTTRVAVAGLGAIGRVLARRLSAGMPGFTLACAAARDH
                     AKAQAWLACERIACALVEPEAFPAHADLAIECTPAPMLERICRPMLEAGKQVMVLSAG
                     ALLPRPDLVELAKARGGQIIVPTGALLGLDAVTAAAEGRIHSVRLITRKPPRGLVGAP
                     YLTANGISVEGLNAPKLVFSGTAREAAAGFPANVNVAAALALAGIGPDRTMTEIWADP
                     SLDRNCHTVEVDSDSARFTLSIENIPSDNPRTGRITALSVLAALRKLGSPLRIGT"
     gene            1111..2109
                     /locus_tag="VIQ50_05635"
     CDS             1111..2109
                     /locus_tag="VIQ50_05635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006615029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9359895.1"
                     /translation="MLKSRMSNMLKGVAGACGVLLVATSMALAQDYPAKPMTMIIPFA
                     AGGPTDVLGRVMAQRMSEILAQQVIVENVGGAGGMTGAKRVADAAPDGYTFVLGTVGT
                     QAQSQTMYKRPLYHAATDFAPVALIAEVPIVLITRNDLPVNNLQEFIAYGKANQGKMQ
                     YGSAGAGSATHLGCVLLNYLIGVDITHVPYRGTGPAMQDLQGGRIDYLCEIVSTAKPQ
                     IDGGTVKAIAIMTKERSPALPNVPTGLEQGVPNLEAYTWNAIFLPKGTPADIVKRLND
                     ATVEAMKTPGVRERLEALGAVIVPEDRATPEYLDLFVKREIDKWAGPIKASGVTVD"
     gene            complement(2158..2364)
                     /locus_tag="VIQ50_05640"
     CDS             complement(2158..2364)
                     /locus_tag="VIQ50_05640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6494 family protein"
                     /protein_id="HEY9359896.1"
                     /translation="MNEDVFNGSIRKFLKTVGVSAQREIEKAVRQAWAEGRLKGNEKF
                     PAAAMITLGGIGLSHEVKGEIELE"
BASE COUNT          518 a          842 c          850 g          473 t
ORIGIN      
        1 gatgttcgcc gggtttgacg ctaagattat ggccaaacgg aactcgtggc gcgtttgaaa
       61 atccccaagg aatttaatcc gttaggccgg caaggccgag acagccggcc ccaaaaccaa
      121 aggccgcgtc gcagtttcgc ttgtttacag aggcttaact caagttccaa ttcgcagggg
      181 cgagccgagc ttgcgcagtg ccgccagcac cgagagcgcc gtgatccgtc cggttcgggg
      241 attgtccgaa ggaatattct cgatcgatag ggtaaagcgg gccgagtcgc tatccacttc
      301 gacggtgtgg cagttgcggt cgagcgaggg gtcggcccaa atctccgtca tcgtccggtc
      361 gggtccgatg ccagcaagcg ccagcgccgc cgccacattg acgttggcag gaaatcccgc
      421 cgccgcctct cgggcagttc cggagaagac aagcttgggc gcgttcagtc cctccaccga
      481 gatgccattt gcagttagat acggagcgcc cacgaggccg cgcggcggct tgcgcgtgat
      541 caggcgcacg gaatgaatgc ggccttcggc cgcggcggtg accgcatcga gtccaagcag
      601 cgctcccgtc ggcacgatga tctgccctcc ccgtgctttg gcgagttcga ccagatcggg
      661 ccgcggcagc agcgcgccgg ctgagagcac catcacttgt tttccggcct ccaacatcgg
      721 ccggcaaatt cgttcgagca ttggtgccgg cgtgcattcg attgcaagat cggcatgagc
      781 cggaaaggcc tcaggctcga ccaaagcgca cgcgatccgc tcgcaagcaa gccaagcttg
      841 cgctttggcg tggtcgcgcg ccgccgcgca ggcgagcgtg aaccccggca tgccggcgga
      901 gagcctgcgc gcgagcacgc ggccgatggc gccgaggccg gcaacggcaa cgcgtgtcgt
      961 cgagatcact gggctgggca cgagacctcc ccgacgtttg ctcttacgcg gcccgttgcc
     1021 cgacctcaag catgggaacc ccgcgtcaaa gagcgacttg accaccatcg ggcaagagac
     1081 aactgtctcg aacggccaag gagaagcgaa atgctcaaat caagaatgag caacatgctc
     1141 aagggcgtag ctggcgcctg cggcgtcctg ctcgttgcta ccagcatggc gctggcgcag
     1201 gactatcccg cgaagccgat gacgatgatc attccattcg cggccggcgg acccacggac
     1261 gtgctcggcc gcgtgatggc ccagcgcatg agcgagatcc tcgcccaaca agtcatcgtg
     1321 gagaacgtcg gcggcgccgg cggcatgacc ggggccaagc gcgtcgccga tgccgcgccc
     1381 gacggctaca ccttcgtgct cggcaccgtc ggcacgcagg cgcagagcca gaccatgtac
     1441 aagaggccgc tctaccacgc ggcgacggat tttgcgcctg ttgcgctgat tgccgaggta
     1501 ccgatcgtac tcatcacgcg caacgatcta ccggtgaaca accttcaaga attcattgcc
     1561 tatggcaaag ccaaccaggg gaagatgcaa tacggttcgg caggcgcagg ctccgcaacc
     1621 catctcggtt gcgtgctgct caactatctc atcggtgtcg acatcaccca tgtgccctat
     1681 cgtggcacgg gcccggcgat gcaggatctc cagggcggcc ggatcgacta tctgtgcgag
     1741 atcgtcagca ccgccaagcc gcaaatcgac ggcgggacgg tcaaggcgat cgcgatcatg
     1801 accaaggagc gctcgcccgc gctgccgaac gtgccgaccg gcctcgagca gggcgtaccc
     1861 aatctcgagg cctatacttg gaatgctatc tttcttccaa agggcacccc ggccgacatc
     1921 gtcaagaggc tcaatgacgc tacggttgag gcgatgaaga caccgggggt gagggagcgg
     1981 ctggaagcac tcggggcggt gattgtgccg gaggaccgcg ccacgccgga atatctcgac
     2041 ctgttcgtca agcgtgagat cgacaaatgg gccggtccga tcaaggcgag cggtgtgacc
     2101 gtggactgac tcgagacccg ctacgacggg cgccagcaga tgcgggctgc atgcttctca
     2161 ttccagctcg atctcgccct tgacctcgtg cgacaggccg ataccgccga gcgtgatcat
     2221 ggcagcggcg ggaaacttct cgttgccttt gagccggcct tccgcccacg cctggcggac
     2281 ggccttctcg atctcgcgtt gggcgctcac gccaaccgtc ttgagaaatt tgcgaatact
     2341 gccgttgaag acatcctcgt tcatgatcgc ctccttgcgc cattatacgc ttgaacaacg
     2401 cctgagtggc tgccgccgaa tcgccgtgtt tcggccggat tgagcgaaca attccccatt
     2461 tgcgtcaatg tgaagccatt accgcgggcc gtatatgcgg gttgggcctg agtgacagga
     2521 gcgtgcgatg ccgaggatgc gtactttggc aattgcggtg gctgccctcg gagtgttgag
     2581 cggcttgtcg ctgagcggcg cgcgggcatg cgataacgat cgctatccat gtccgatcgt
     2641 atcgcaaacc gaggatgcgg cgggcgctgc ggctcgctcg ccc
//
LOCUS       DATCWM010000296         4347 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_396469, whole genome shotgun sequence.
ACCESSION   DATCWM010000296 DATCWM010000000
VERSION     DATCWM010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4347)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4347)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4347
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_396469"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..526)
                     /locus_tag="VIQ50_05645"
     CDS             complement(<1..526)
                     /locus_tag="VIQ50_05645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011155795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HEY9359897.1"
                     /translation="MATHKLLLLPGDGIGPEVMAEVKKLIAFMNARGLGTFEIEDGLV
                     GGGCYDAHKVAITDATMTKAHAADAVIFGAVGGPQWDRVPYEVRPEAGLLRLRKELGL
                     FANIRPAICYPALAESSSLKREVVDGLDIIILRELTGGVYFGEPKTIIDLGNGQKRAI
                     DTQVYDTYEIERIGR"
     gene            635..1897
                     /locus_tag="VIQ50_05650"
     CDS             635..1897
                     /locus_tag="VIQ50_05650"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY9359898.1"
                     /translation="MSPQRPKVVIVGAGFGGIEAATALSRVAVDVILLDRQNHHCFQP
                     LLYQVATAALSPAEIAWPIRHMLRQQRNATVFMTEAEAVDLTGRFVETSAGPISYDYL
                     VVATGATHSYFGHDDWAKFAPGLKRIEDATRIRRSILLAFEQAELAGNDAERQRLLTF
                     VIVGGGATGVEMAGAIAEIARQTLANDFRRIDPRNSRIILLEAGPRVIPTLSEDLSQY
                     AERALTRMGVDVRTSTRVIGCDACGVDVDHGRIDASTIIWAAGVVASPAASWLGAAHD
                     RAGRVLVRPDLSVPDHPEVFVIGDAAAIHGDDGEPVPGVAPAAKQMGNYVGRLIAARL
                     AGKSLPAFRYRNLGELATIGRRAAVVKFGRLHLKGFIGWLFWSFAHIYFLIGVKNRFI
                     VAFTWLWDYLTFQRGARLITEVPPQGRQ"
     gene            complement(1913..2692)
                     /locus_tag="VIQ50_05655"
     CDS             complement(1913..2692)
                     /locus_tag="VIQ50_05655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011155792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEY9359899.1"
                     /translation="MPRRRRIPPPGVDPELLVKDAAKLMPDPTRRLFLRGGASLGALA
                     FLTGCDIVDGTSAEQVLMKISRFNDRAQAWLFNPNKLAPTYPDSAVRRPFPFNAYYPE
                     DEAPEVDGEDYKLEVGGMVDNTKSWTLDELYALPQETQITRLVCVEGWSAIGKWTGSP
                     LREFLRRIGADTRAKYVWFRCAEGYSTSIDMPTALHPQTQMTFKFDGEILPRKYGFPM
                     KVRMPTKLGFKNPKHVMEIAVTDKYLGGYWEDQGYNWFSGL"
     gene            complement(2719..3354)
                     /locus_tag="VIQ50_05660"
     CDS             complement(2719..3354)
                     /locus_tag="VIQ50_05660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEY9359900.1"
                     /translation="MSIEATHDPALMPAEPARPVIHPRWVRVTHWVNALTMVVLIGSG
                     WQIYNASPLFPLVFPTGITLGGWLAGALLWHFAAMWLLAVNGLIYAVLGIVTGHFRRK
                     LIPIRPGEVLADARAAFTGKLSYDDLSVYNAVQRLFYVGVIVAGIVVVLSGLAIWKPV
                     QLQQLTAAFGGYDTARYVHFFAMAAIVGFLVVHVIMSVIVPSSLRAMITGR"
     gene            3509..>4347
                     /locus_tag="VIQ50_05665"
     CDS             3509..>4347
                     /locus_tag="VIQ50_05665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018265878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEY9359901.1"
                     /translation="MSKTGAGNFFEDFSIGQVIRHATPRTITVGDVAIYNGLFGPRFA
                     VQSSDAFARAIGYPCSPVDDLLVFHVVFGKTVPDISLNAVANLGYAACRVLAPVYPGD
                     TLSAESEVIGLKENSSRKTGIVFVRSTGCKPDGSKVIEYVRWVMVRKRDEAAPVPDDH
                     VPRLPEAVLPTTLGDGCPRIDVAAYDFTLAGGSHHFGDYAVGEKINHVDGVTVEEAEH
                     QIATRLYQNTARIHFDQYSAAQGRFGRRLIYGGHVISLARALSFNGLANAFHIAAING
                     GRHV"
BASE COUNT          779 a         1363 c         1383 g          822 t
ORIGIN      
        1 cgcggccgat gcgctcgatc tcgtaagtgt cgtagacctg ggtgtcgatg gcgcgcttct
       61 ggccgttgcc gagatcgatg atggtcttcg gctcgccgaa atagaccccg ccggtcagtt
      121 cacgcaggat gatgatgtcg agcccatcca ccacctcgcg tttgaggctc gaggattcgg
      181 cgagcgcggg atagcagata gcggggcgaa tattggcgaa caagccgagt tccttgcgca
      241 gacgaaggag cccggcctcc ggccgcacct catacggcac gcggtcccat tgtggaccgc
      301 cgactgcgcc gaagatcacg gcgtcggccg cgtgcgcctt ggtcatggtc gcgtcggtga
      361 tcgcaacctt gtgagcgtcg tagcagccgc cgccgaccag accgtcttcg atctcgaagg
      421 tccccaatcc gcgcgcattc atgaacgcga tgagcttttt cacctcggcc atgacttccg
      481 ggccgatgcc atcgccgggg aggagaagaa gcttgtgggt cgccatcgcg cattgcctcg
      541 ctcgagtgat gtcgaggcgg attgctaaag ccacgcggac gccttggcaa gacgagggcc
      601 agttggcaag gtgagggtgg caagagcaac gtgcatgtca ccgcagcgtc caaaggtggt
      661 gatcgtcggc gcgggcttcg gtgggatcga agccgcgacg gcgcttagcc gagttgccgt
      721 cgacgtgatc ctgctcgatc ggcaaaatca tcattgcttt cagccgttgc tgtaccaggt
      781 ggcgaccgcg gccttgtcgc cggccgaaat cgcatggccc attcgacaca tgttgcggca
      841 gcaacggaac gcgacggtat tcatgaccga ggccgaggcc gtcgacctca ccgggcgatt
      901 cgtcgagacc agcgcgggtc cgatttcata tgactatctc gtcgtcgcga ccggcgcgac
      961 gcattcctac ttcggtcatg acgattgggc caagttcgca ccgggactca aacgcatcga
     1021 ggacgcgact cgcattcgcc gaagcattct gctggcgttc gaacaagccg aactcgccgg
     1081 caatgatgcc gagcggcagc gcctgctcac cttcgtcatc gtcggcgggg gagcgaccgg
     1141 tgtggaaatg gcgggcgcca tagccgagat cgcccgccag accctagcca acgactttcg
     1201 cagaatcgac ccgcgcaatt ctcgcatcat cttgctcgag gccggtccgc gggtcatacc
     1261 gaccttgtct gaggacctgt cgcaatatgc cgagcgcgca ctcactcgca tgggggtcga
     1321 tgtgaggacc tccactcgcg tgatcggctg cgatgcttgc ggggtggacg tggatcatgg
     1381 ccgtatcgac gccagcacca tcatctgggc cgcgggggtc gtggcctcgc ccgccgcctc
     1441 ctggctcggc gctgcgcatg atcgcgccgg ccgcgtgctg gtccgccccg atctgtcggt
     1501 cccggaccat cccgaggtgt tcgtgatcgg cgatgcggcc gcgatccatg gcgacgacgg
     1561 cgagccggtt ccaggtgtcg cgccggcggc gaagcaaatg ggcaactatg tcggtcggct
     1621 catcgcggcg cgcttggcgg ggaaatcttt gcctgcgttt cgctatcgca acctgggcga
     1681 gctcgccacc atcggacggc gggccgcagt ggtgaagttc ggccgactgc acctcaaggg
     1741 cttcatcgga tggctattct ggagcttcgc ccacatctat ttcctgatcg gggtgaagaa
     1801 tcggttcatt gtcgccttca cctggctgtg ggactacctc acgttccagc gcggcgcgcg
     1861 cctcatcacc gaagttccgc cgcagggccg acagtgaaac tctctcggcg ggtcagaggc
     1921 cgctgaacca gttgtatccc tggtcctccc agtatccgcc gagatatttg tccgtgacag
     1981 cgatctccat cacgtgcttg ggattcttga agccgagctt ggtcggcatg cgcaccttca
     2041 tggggaagcc gtacttgcgc ggcaggattt caccgtcgaa cttgaaggtc atctgggttt
     2101 gcggatgcaa cgcggtcggc atgtcgatcg aggtggaata gccctcggcg cagcggaacc
     2161 acacatattt cgcccgcgtg tcggcgccga tgcgccttaa aaactcgcgc agcggcgagc
     2221 cggtccattt gccgatcgcg ctccagccct caacgcaaac caggcgggtg atttgcgttt
     2281 cttgcggcag tgcatagagc tcatcgagcg tccaggactt cgtgttgtcg accatgccgc
     2341 caacctcgag cttgtagtcc tctccgtcga cctcgggcgc ctcgtcctca gggtaatagg
     2401 cattgaacgg aaaaggccgc cgcaccgcgc tgtccgggta ggtcggcgcg agcttgttcg
     2461 gattgaacag ccatgcctgc gctcgatcgt tgaaacggga aatcttcatc agtacctgtt
     2521 ccgccgacgt cccgtcgaca atgtcgcagc cggtgagaaa agccagtgcg ccgaggctcg
     2581 cgccgccgcg taggaaaagc cggcgcgtcg gatcgggcat gagcttcgca gcgtctttga
     2641 cgaggagctc ggggtcgacg ccaggtggtg gaattcttcg acggcgtggc atcctcgtcc
     2701 tttcccggct ctcaacgtct atcggccggt gatcatggcg cgcagcgaac tcggaacgat
     2761 aacgctcatg atcacgtgga cgacgagaaa gccgacgatt gccgccatcg cgaagaagtg
     2821 cacgtagcgg gcggtatcat aaccgccgaa cgccgccgtc agctgctgca attgcaccgg
     2881 tttccagatg gcgaggcccg acagcacaac gacgatgccg gccacgatga cgccgacata
     2941 aaatagtctt tgcaccgcgt tgtagaccga gagatcgtcg tagctgagct tgccggtgaa
     3001 cgcggcacgg gcgtcggcca agacttcccc ggggcggatc ggaatgagtt tgcgccggaa
     3061 gtggccggtc acgatgccca gcaccgcgta gatgaggccg ttcaccgcca gaagccacat
     3121 cgccgcgaaa tgccagagca gcgcccccgc cagccagcct ccgagcgtga tcccggtggg
     3181 aaaaacgagc ggaaacagcg gcgaggcgtt gtagatctgc caacccgagc cgatcaagac
     3241 gaccatcgtt agcgcgttca cccaatgggt gacccgcacc caacgcggat gtatgaccgg
     3301 ccgcgcaggt tccgcgggca tcagtgccgg atcatgggtg gcctctatcg acatgagctc
     3361 gcttcttcct ggctttgcca tcgcgcaatg tgtagcaaat tcccgtcggc gggtcgcttc
     3421 acgttccgct agcgcgactg tgaacgtcaa tcatggcgcg atggatgtgc cagctccata
     3481 gctccggatc gggatggtgg tgaggacgat gtcgaagact ggtgccggca atttcttcga
     3541 ggatttcagc atcggccaag tgatcaggca cgcgacgccg cgcacgatca cagtggggga
     3601 cgtggccatc tacaatgggc tgttcgggcc gcgctttgcg gtccaatcgt cggacgcctt
     3661 cgcgcgcgcg atcggctatc cgtgctcgcc ggtcgatgac ctgctcgtgt tccacgtcgt
     3721 gttcggcaaa accgtgccgg acatctcgct caacgcggtc gccaacctcg gctatgcggc
     3781 ctgccgcgtt ctcgcgccgg tgtaccccgg cgatacgctg agcgcggagt ccgaggtcat
     3841 cgggctgaag gagaattcaa gccgtaaaac cggcatcgtc ttcgtgcgtt cgacaggttg
     3901 caagccggac ggcagcaagg tgatcgagta cgtgcgctgg gtcatggtgc gcaagcgcga
     3961 tgaggcagcg ccggtgccgg acgatcacgt gccgcgccta cccgaagcgg tgcttccgac
     4021 gacgctcggc gatggctgcc cgcgcatcga cgttgccgcc tacgacttca cgctcgccgg
     4081 cggttcgcat cacttcggcg attacgccgt cggtgagaag atcaatcacg tcgatggcgt
     4141 gaccgtggag gaggcggaac accagatcgc gacccgcctc tatcagaaca ccgcgcgcat
     4201 ccatttcgac cagtactcgg cagcccaagg ccggtttggc cgccgcctga tttacggcgg
     4261 gcatgtgatt tcgcttgccc gcgcgctctc cttcaatggg ctcgccaatg ccttccatat
     4321 tgccgcgatc aacggcggcc gccacgt
//
LOCUS       DATCWM010000297         2055 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_40243, whole genome shotgun sequence.
ACCESSION   DATCWM010000297 DATCWM010000000
VERSION     DATCWM010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2055
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40243"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..901
                     /gene="mtnA"
                     /locus_tag="VIQ50_05670"
     CDS             <1..901
                     /gene="mtnA"
                     /locus_tag="VIQ50_05670"
                     /EC_number="5.3.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046523 -
                     S-methyl-5-thioribose-1-phosphate isomerase activity
                     [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="S-methyl-5-thioribose-1-phosphate isomerase"
                     /protein_id="HEY9359902.1"
                     /translation="DASDEALERACAMLAATRPTAVNLKWALDEMVAAVRNRPREERL
                     ATAYRRAAEICEEDVAINQAIGRHGAKLLAAIAANKKSGEPAQVLTHCNAGWLATVDV
                     GTALAPVYVAHDRGVPLHVWVDETRPRNQGAALTAWELGQHGVPHTVIADNTGGHLMQ
                     HGMIDAVIVGADRVTANGDVCNKIGTYLKALAAKDNDVPFYVGLPSPTIDFSLSDGRA
                     EIPIEQRGADEVATVTGLTGDGRIERVRVVPEGSAVANYAFDVTPARLVSGLITERGI
                     IAPNRDALAAAFTQRAQASSVAG"
     gene            1110..1580
                     /locus_tag="VIQ50_05675"
     CDS             1110..1580
                     /locus_tag="VIQ50_05675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcB family DNA repair protein"
                     /protein_id="HEY9359903.1"
                     /translation="MSISSLAAALPVDGRQSPTALAVARGTTRLLHSLGFSVVSELPL
                     ASGRRADLVALGADGEVWIVEIKSSIADLRADQKWIDYRLHCDRLFFAATLEVPCEIF
                     PPDVGLIVADAFGASVVCEAPEHRLHGTTRKSIMLAFARAAALRLSALADPEGP"
     gene            complement(1605..>2055)
                     /locus_tag="VIQ50_05680"
     CDS             complement(1605..>2055)
                     /locus_tag="VIQ50_05680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ActR/PrrA/RegA family redox response regulator
                     transcription factor"
                     /protein_id="HEY9359904.1"
                     /translation="GFTVTTAESVADGLNQLETTSPAFAVVDMRLEDGNGLDVICALK
                     RRRPDARAIILTGYGNIATAVNAVKLGAVDYLSKPVDADDVVAALLALEGRRAEPPEN
                     PMSADRVRWEHIQRIYELCGRNVSETARRLNMHRRTLQRILAKRAPK"
BASE COUNT          317 a          710 c          693 g          335 t
ORIGIN      
        1 ggacgcctcc gacgaagcgc tcgagcgcgc ctgtgcaatg ctcgccgcca cccgtccgac
       61 cgccgtcaac ctcaaatggg cactcgacga gatggtggcc gcggtgcgca accgcccgcg
      121 cgaggagcgc cttgccaccg cttatcgccg cgccgccgag atctgcgagg aggacgtcgc
      181 catcaatcag gcgatcggcc gccatggcgc aaagctcctc gccgccatcg ccgccaacaa
      241 gaaatcgggc gagccggcac aagtgctcac gcactgcaat gcgggctggc tcgcgaccgt
      301 cgatgtcggc accgccttgg cgccggtcta cgtggcgcac gaccggggcg tgccgctgca
      361 tgtgtgggtc gacgagacgc gtccgcgcaa tcagggcgcg gcgctgaccg cctgggagct
      421 cggccaacac ggcgttccgc acacggtgat cgccgataac accggcggcc acctgatgca
      481 gcacggcatg atcgacgcgg tgatcgtcgg ggccgaccgg gtcaccgcca acggcgacgt
      541 ctgcaacaag atcggcacct atctcaaggc gctcgccgcc aaggacaacg acgtgccgtt
      601 ctacgtcggg ctgccgtcgc cgaccatcga cttttcgctc agcgacgggc gggccgagat
      661 tccgatcgaa caacgcggcg cggacgaggt tgcaaccgtc accggcctca ccggcgacgg
      721 ccgcatcgag cgcgtgcgcg tcgtgccgga aggctcggca gtggcgaatt acgccttcga
      781 cgtgaccccg gcgcggctgg tcagcggcct cattaccgag cgcggcatca tcgcgcccaa
      841 tcgcgacgcg ctcgccgccg ctttcacgca acgcgcgcag gcaagctcgg tcgccggatg
      901 agccgactcg gtcccctccg gcgcagccga ccgacaaggc tacctgcaga cacggggtgt
      961 tgctggagtt aacgcccgac aactagattt gacgcgagcg cgcgcgctat gatcctcttt
     1021 gcgggtcgcc tcgggagtgc agcgtcgtgc gtggcgtgcg gtttcgtcgt gcgagcacaa
     1081 tcacaccgtt gccagggctg cttcattcca tgagcatcag ttcgctcgcc gccgcgctgc
     1141 ccgtcgacgg tcggcaatcg ccgaccgcgc tcgccgtggc gcgcggcacc acgcgccttt
     1201 tgcattcgct gggcttctcg gtggtcagcg aattgccgct ggcatcgggc cgtcgcgccg
     1261 atctggtggc gctcggcgcc gacggcgagg tgtggattgt cgagatcaag tcgtccatcg
     1321 ccgatcttcg cgccgatcag aagtggatcg attaccggct gcattgcgac cggttgtttt
     1381 tcgctgccac gctcgaagtg ccgtgcgaga tttttccccc cgacgtcggc ctcatcgttg
     1441 ccgatgcctt cggcgcatcc gtggtgtgcg aggcgcccga gcaccggctg cacgggacca
     1501 cccgcaagag cataatgctc gccttcgcgc gcgcggcagc gctgcgcctg tcggcgctcg
     1561 ccgatccgga agggccatag gggttagacg cctgaggcag gcggtcactt cggcgcgcgc
     1621 ttggccaaaa tgcgctgcag cgtgcggcgg tgcatgttga ggcggcgcgc cgtctccgac
     1681 acgttgcggc cgcagagctc gtagatgcgc tggatatgct cccaccgcac gcgatcggcc
     1741 gacatcggat tttccggcgg ctcggctctg cggccctcga gcgcgagcaa ggccgcgacc
     1801 acgtcgtcgg cgtccaccgg cttggagaga tagtcgaccg cgccgagctt caccgcgttc
     1861 accgcggttg cgatgttgcc gtagccggtc aggatgatgg cgcgggcgtc gggacggcgc
     1921 cgcttgaggg cgcagatcac gtcgaggcca ttgccgtcct cgagccgcat gtccaccacg
     1981 gcaaaggccg gggaagtggt ttcgagctgg tttagcccat ccgccaccga ctcggcggtg
     2041 gtcacggtga agccg
//
LOCUS       DATCWM010000298         2331 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_304727, whole genome shotgun sequence.
ACCESSION   DATCWM010000298 DATCWM010000000
VERSION     DATCWM010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2331)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2331
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_304727"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            333..557
                     /locus_tag="VIQ50_05685"
     CDS             333..557
                     /locus_tag="VIQ50_05685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359905.1"
                     /translation="MQTKRTYQVQHWPNGQWNPEHNWRKVDAGSEKEAAEKVCGLPLT
                     ERGTLAQLRARVLAFGDLKQRSATSFYAAK"
     gene            878..1477
                     /locus_tag="VIQ50_05690"
     CDS             878..1477
                     /locus_tag="VIQ50_05690"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY9359906.1"
                     /translation="MTGMYDQVRPGIGHNQPEEYAEEKKHERWERWAKKRTFVRALEG
                     TYSHLYKALLEEKRVYPSRDVPWKGGPGQFGKSVISPQATSIVQSMESHIEAYAPSAY
                     GQKHGHLNSAVFYVLKGCGHDVHDGRHIPWKAGDVMIVENGCVHQHFNDDPNEEAILL
                     VFKAKPLFLFMHLLFQKIVEWPPEKLPPGQDSYEPPADI"
     gene            1490..2050
                     /locus_tag="VIQ50_05695"
     CDS             1490..2050
                     /locus_tag="VIQ50_05695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018430209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin"
                     /protein_id="HEY9359907.1"
                     /translation="MSFEDKAQAWSGSANCTFHADDVAASQNFRTQYETLANVVKAEE
                     MPWERCPDGLIKHLVHHRLNTRECCVEAYMQFLKAGERSGKHRHMWEEIIFVVEGSGY
                     DLHWDMKFDCLDAFKWEWAEVPKKFEWKEGDYIYIPPFTTHQHFATAETRLIMMSNRI
                     VKEMGFDWFDQVESAPGFEASQQSAR"
     gene            2095..>2331
                     /locus_tag="VIQ50_05700"
     CDS             2095..>2331
                     /locus_tag="VIQ50_05700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEY9359908.1"
                     /translation="MDRKRAQIEEQTGRGKPANYRGWQSDVIVDLIKRYRFPHITLNP
                     GASFRGLHDSLVNYGENDPPMLLCQHEKIAVQIAH"
BASE COUNT          489 a          731 c          732 g          379 t
ORIGIN      
        1 cgccggactg ccgcggatga aggacctcgg caggatcgcg cggccgcaaa ccgccggcct
       61 gacgccggcg cggtcggcgc cgcgacgggt ggcccgcgcc gcgagcaaga cccgcgcaag
      121 aaaccgctgg tgaggtcggc ggcgttaaca tttcgttaac atcgctggga gctagaatcg
      181 cggattaacg gccgccatcg tgcggatgcg ggcgcgcttt gaaagcggca acaccgcggc
      241 gagagatttc acaaagagtt cacgcgcggc gcccgattgt cgcccaaaac gatttgtacc
      301 cgcgctgccg cacgaaacat cgggggaaca cgatgcaaac aaagcgaact taccaggtgc
      361 aacattggcc caacggccaa tggaatcctg agcacaactg gcgcaaggtc gatgccggca
      421 gcgaaaaaga ggcggcagag aaggtctgcg gtctgccgtt gaccgagcgc ggaacgctcg
      481 cgcagcttcg cgcgcgggtc ctcgccttcg gcgatctcaa acagcgcagc gctacgtcat
      541 tttacgccgc gaaatagtcg caggcctgcg gctctgtcgc cagcgctagc agtctctccc
      601 aattttcccc ttcgtttgaa ccgtcgccgg cggcgtctgc cgacgcgcgg tcgaaagccc
      661 gcgcggcgtg cggacgggag taacgccatg cttggcgcac cgcgcgtggc gctcgcgccc
      721 acacattccg gatcgcgaga accaagtggc ggggccggag cgttgcgcgc tatcccgtta
      781 tcccgtaatg acagcccaca aggccaattc acagtgtgtt tgcaacgacg gctggcgcgg
      841 aacgccatcg cgcacccgtt tccagggaga cgccggaatg acggggatgt acgaccaggt
      901 gcggcccggc atcgggcaca atcagcccga ggaatatgcc gaggagaaga agcacgagcg
      961 ctgggagcgc tgggccaaga agcgtacctt cgtgcgcgcg ctcgaaggca cctacagtca
     1021 tctctacaag gcgctcctcg aggagaagcg ggtctatccg tcccgcgacg tgccgtggaa
     1081 gggcggcccg ggccagttcg gcaaaagcgt catcagcccg caagcgacca gcatcgtcca
     1141 atcgatggaa tcgcacatcg aggcttacgc gccgagcgcc tacggacaga agcacggcca
     1201 cctcaacagc gcggtgttct acgtgctcaa gggctgcggc cacgacgtgc acgacggccg
     1261 ccacatccct tggaaagccg gcgacgtgat gatcgtcgag aacggttgcg tgcatcagca
     1321 cttcaacgac gatcccaacg aggaggccat tctcctggtg ttcaaagcca agccgctgtt
     1381 cctcttcatg cacctcctgt tccagaagat cgtggagtgg ccccccgaga aattgccgcc
     1441 cggccaggac tcctatgaac cgcccgccga tatttgagga gacgcgcgca tgtcgttcga
     1501 agacaaagcc caggcatggt cgggctccgc caattgcacg ttccatgccg acgatgtcgc
     1561 ggcctcgcag aatttccgca cgcagtacga gacgctggcc aatgtcgtca aagccgagga
     1621 gatgccgtgg gagcgttgcc ccgatggctt gatcaagcat ctcgtgcacc atcgtctgaa
     1681 cacgcgcgag tgctgcgtcg aggcctatat gcagttcctc aaggccggcg agcgctccgg
     1741 caagcatcgc cacatgtggg aggaaatcat tttcgtggtc gagggctcgg gctacgacct
     1801 gcactgggac atgaagttcg attgcctcga tgcgttcaaa tgggagtggg ccgaagtgcc
     1861 gaagaaattc gagtggaaag agggcgatta catctatatt ccgcccttca ctacgcacca
     1921 gcacttcgcg accgcggaga ctcggctcat catgatgagc aaccggatcg tcaaggagat
     1981 gggcttcgac tggttcgatc aagtggaaag cgcgccggga ttcgaggcga gccaacagtc
     2041 agcgcggtga ggcttgacgc gttgccgccg cgcgcgttcc gttgatatgg catgatggat
     2101 cgcaagcgcg cgcagattga ggaacagacc gggcgaggca agccggccaa ctatcgcggc
     2161 tggcagtccg acgtgatcgt cgatctgatc aagcgctacc gcttccccca catcacgctc
     2221 aatcccggcg cgagctttcg cgggctgcac gactcgctgg tcaactacgg cgagaacgac
     2281 ccgccgatgc tgctttgcca gcacgaaaag atcgccgtcc agatcgccca c
//
LOCUS       DATCWM010000299         2387 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_126596, whole genome shotgun sequence.
ACCESSION   DATCWM010000299 DATCWM010000000
VERSION     DATCWM010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2387
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126596"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..278
                     /locus_tag="VIQ50_05705"
     CDS             <1..278
                     /locus_tag="VIQ50_05705"
                     /inference="COORDINATES: protein motif:HMM:NF013231.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEY9359909.1"
                     /translation="QTDLVERTGIDRSTLADIVGRLLSHGLIQRRRAKEDARAYAIKL
                     TPQGTKALRDAQPGAAAADARLLANLSPAKRQEFLESLSLIVAAARK"
     gene            complement(288..887)
                     /locus_tag="VIQ50_05710"
     CDS             complement(288..887)
                     /locus_tag="VIQ50_05710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbE family thiol:disulfide interchange protein"
                     /protein_id="HEY9359910.1"
                     /translation="MTDAASQPNMRRRFGLALPFVIFAALAGLFWYALQGGDPSRLPS
                     ALIGKPVPEFTLPPLQGLTADGGKEVPGFASSDLAQGEPTIVNVFASWCVECQIEHPL
                     LVALAKDQAIRLYGIDYKDDQASARRYLGRYGNPYSRVGVDSSGRVAIDFGVYGVPET
                     YVIGGDGKIAYRHVGALTEQALRDKILPLLKPPASAPQG"
     gene            complement(884..1093)
                     /gene="ccmD"
                     /locus_tag="VIQ50_05715"
     CDS             complement(884..1093)
                     /gene="ccmD"
                     /locus_tag="VIQ50_05715"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmD"
                     /protein_id="HEY9359911.1"
                     /translation="MPDLGQHAVFILAAYGATFVAVAALAFFIVEDDRKQRRLLADLE
                     RRGIRRRSAGPSAKPKASTGRQRGS"
     gene            complement(1106..1843)
                     /locus_tag="VIQ50_05720"
     CDS             complement(1106..1843)
                     /locus_tag="VIQ50_05720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease"
                     /protein_id="HEY9359912.1"
                     /translation="MVSLANPTRFLSLVDRIVPWLAAVTLILLGIGLYLAFFVAPPDY
                     QQGETVKIMFIHVPAAWLGMFGYVLIAVAALGTLIWRHPLADVAAKTAAPIGATFTFV
                     ALVTGSLWGKPMWGTYWVWDARLTSVLVLFLLYLGLLALWQAIEEPGRAGRAAAILAL
                     VGAVNVPIIHYSVVWWNTLHQPASVFRVGGPSIDPSLLAPLLVMALAFTLLFILLHLI
                     SMRAEILRRRVRALQQTQVERAALVEV"
     gene            1963..>2387
                     /locus_tag="VIQ50_05725"
     CDS             1963..>2387
                     /locus_tag="VIQ50_05725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY9359913.1"
                     /translation="MSQPEQFEVLVLGSGTAGKLIAWHMAGAGRRTAVVERKWVGGSC
                     PNIACMPSKNEIWSATAAHFVRHAAEFGMTTGPVVIDMAVVRERKRKMVEAQVAAHLR
                     NYKESGAELIMGAARFVAPKTLEVTLNDGGTRLLSGDKV"
BASE COUNT          485 a          738 c          800 g          364 t
ORIGIN      
        1 ctcagaccga tctcgtcgaa cgcaccggga ttgaccgctc cacgctcgcc gatatcgttg
       61 ggcggctact cagtcacggc ctgatccagc ggcgcagggc gaaggaagac gcgagagctt
      121 acgccatcaa gctgacgccg caagggacca aggcgctccg tgacgcgcag ccgggtgccg
      181 ctgcagccga tgcgcggctc ctcgccaatc tgtcgccggc caaacggcag gaattcctcg
      241 agtcgctcag cctgatcgtg gccgccgccc gcaaataggg gcctggatca cccctgcggc
      301 gcgctggctg gcggcttcag cagaggcagg atcttgtcgc ggagcgcctg ctcggtgagg
      361 gctcccacat gacgataggc gatcttgcca tcaccgccga tcacgtaggt ctcaggcacg
      421 ccgtagacgc cgaaatcgat cgcgacgcgg ccggagctgt cgacgccgac gcgggaatag
      481 ggattgccgt aacggccgag atagcgccgc gcagaagcct gatcgtcctt atagtcaatg
      541 ccgtagagcc tgatcgcctg atccttggcg agagccacga gcaaaggatg ctcgatctga
      601 cattcgacgc accacgaggc aaacacattg acgatggtcg gctcgccttg cgcaaggtcg
      661 gaggacgcga agcccggtac ttccttcccg ccgtcggcag tcaacccttg caacggcgga
      721 agcgtgaact ccggcaccgg cttgccgatc agcgccgagg gaagccgcga gggatcgccg
      781 ccctggagcg cgtaccagaa caggcccgcg agcgcggcga agatgacgaa cggaagtgcg
      841 aggccgaagc gccttcgcat gtttggttga ctggccgcgt cggtcatgag ccgcgctgcc
      901 tgcccgtgct tgctttgggc tttgctgatg gaccagccga gcggcgcctg atcccgcgcc
      961 gttcgagatc ggcgagaagg cggcgctgct tcctgtcatc ctcgacgatg aagaacgcga
     1021 gcgccgcaac cgcgacgaag gtcgcgccat aagcggcgag aatgaaaact gcatgctgac
     1081 cgagatcggg catcggaaac ttcgcctaga cttccactag agccgcgcgc tcgacttgcg
     1141 tttgctgcaa cgcgcgcacg cgccgccgca aaatctctgc gcgcatggaa atcagatgaa
     1201 gcaggatgaa gaggagcgtg aaagcaaggg ccatgacgag aagcggcgcg agcagggacg
     1261 gatcgatgga cggacctcca acacggaaca cgcttgccgg ctgatgcagc gtgttccacc
     1321 acacgaccga gtaatggatg atcggcacgt tgaccgcgcc gaccagcgct aggatcgccg
     1381 cggcgcgtcc ggcgcggccg ggctcctcga tggcctgcca tagcgcgagc agcccgagat
     1441 agagcaggaa cagcacgagc accgaggtga gccgcgcgtc ccacacccaa taggtgcccc
     1501 acatcggctt gccccacagc gagccggtga cgagcgcgac gaaggtgaat gtggcgccga
     1561 tcggagcggc ggtcttggcc gcaacgtcgg ccagcggatg gcgccagatc agcgtgccga
     1621 gcgccgcgac cgcgatcagc acatagccga acatgccaag ccaggcggcc ggcacatgga
     1681 tgaacatgat cttgaccgtc tcgccctgct gatagtcggg cggggctacg aagaacgcga
     1741 ggtacagccc aattccgagc aggataagcg tcactgccgc gagccacggg acgatgcggt
     1801 cgacgaggct caggaaacgc gtcggattgg caaggctgac catggcggtt ggtctagttg
     1861 gtttgcacga ttgccgcaat aacgcgcgaa cctgagcaat ggggggcgag tttcttcggg
     1921 aaacgtgctg cctgttatgg gaaatcacaa gcggaggaag ccatgtccca accggaacaa
     1981 ttcgaagtcc tggtgcttgg cagcggaacg gcaggcaagc tcatcgcttg gcatatggcg
     2041 ggggcggggc gacgaaccgc cgtggtggag cgcaaatggg tcgggggctc ctgtccgaac
     2101 atcgcctgca tgcccagcaa gaacgagatc tggagcgcga cggctgcgca tttcgtgcgc
     2161 cacgccgccg agttcggcat gaccaccggt ccggtcgtga tcgacatggc tgtcgtccgc
     2221 gagcgcaagc gcaagatggt cgaggcccag gtggccgcgc atctgcgtaa ctacaaggag
     2281 agcggcgccg agttgatcat gggggctgcg cgtttcgtgg cgccgaagac tctcgaagtc
     2341 accctcaatg atggcggcac ccgccttctt tccggcgaca aggtgtt
//
LOCUS       DATCWM010000300         2058 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_353281, whole genome shotgun sequence.
ACCESSION   DATCWM010000300 DATCWM010000000
VERSION     DATCWM010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2058
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_353281"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..723
                     /locus_tag="VIQ50_05730"
     CDS             <1..723
                     /locus_tag="VIQ50_05730"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEY9359914.1"
                     /translation="AIAGTSIGALIGAAYAAGMSGKEIRRFVIMLAHDRAEILRRLIA
                     TRAGTFANLLNLGFGSATLVDAEKFCEQFLPEQVPHDFGELEIPLLTVATDLYRREQA
                     VFSSGALKPALAASIALPAVMRPVVLAERILIDGGATNPLPFEELRGRADVVVAVDIS
                     GAPTDARRDIPSPWECMLATVLVMANAITAEKIKRGAPDLIVRPKVGAFRALDFLQAS
                     AILRAAAPVKAELKEKLAALLD"
     gene            complement(800..1789)
                     /locus_tag="VIQ50_05735"
     CDS             complement(800..1789)
                     /locus_tag="VIQ50_05735"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359915.1"
                     /translation="MTMIDHCLLSTRRAFLSLALLALCPIADSVAQLAPTLGYVAAKG
                     ANPDRLDVFKRGLAELGYVEGKNVRIEYREGVLDADYQRLVAEFVDRKVSIILAANAP
                     AAVAAARATTNIPIVMLAVNDPVGLGLVKSLDGPGTNVTGTTMYAPQLIGERLRILKT
                     MIPNLDKIAMVMNGNNANNPAQVARVRSEARDLGIEVLAVDIRKPDDVGPAFDRAAAF
                     SAKAVVNAVDSFINSSRFDLAAEAEKRKLPAIYTDLEYVLAGGLMSLGPGHFEGYYGA
                     AKYVDKILHGASPAELPITGATQFKLSVRRSALAKLGLTLPPDITARVNDWVD"
     gene            complement(1818..>2058)
                     /locus_tag="VIQ50_05740"
     CDS             complement(1818..>2058)
                     /locus_tag="VIQ50_05740"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008138321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0052717 - tRNA-specific adenosine-34
                     deaminase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HEY9359916.1"
                     /translation="LVDCDLYVTLEPCTMCAAAISFARIRRLYYGAADPKGGAVESGV
                     RYFSAATCVHRPEVYGGIGESEAAALLRNFFVLRR"
BASE COUNT          396 a          662 c          616 g          384 t
ORIGIN      
        1 gccatcgccg gcacctcgat cggcgcgttg atcggcgctg cctatgcggc ggggatgtcc
       61 ggcaaagaaa tccgccgctt tgtcatcatg ctggcgcatg accgcgccga gatccttcgc
      121 cgcctcatcg cgacgcgcgc cggcaccttc gcaaacctgc tcaacctcgg ctttggcagc
      181 gccacgctgg tggacgctga aaaattctgc gagcaattcc tgcccgagca ggttccgcac
      241 gacttcggcg agctcgaaat tccgctgctc accgtcgcca ccgatctcta tcggcgcgag
      301 caggcggtgt tctcctcggg cgcgctcaag cccgcgctcg ccgcctccat cgcgttgccg
      361 gcggtgatgc ggccggtcgt tctcgccgag cgcatcctga tcgacggcgg cgccaccaac
      421 ccgctcccgt tcgaggagtt gcgcggccgc gccgacgtcg tggtggcggt ggacatttcc
      481 ggcgcaccga cggatgcgcg gcgcgacatt cccagcccct gggagtgcat gctagcgacc
      541 gtcttggtca tggccaacgc catcactgcc gagaaaatca agcgcggcgc gcccgacctc
      601 atcgtgcggc cgaaggtcgg cgcctttcgc gcgctcgatt tcctgcaggc gagcgcgatc
      661 ctgcgcgcgg ccgcgccggt caaggcggag ctcaaggaga agctcgcggc gctgctggac
      721 tagggcgaag cgaaaatctg tcctcgatcg agcactaccg gttttgacca acgcagacgc
      781 gaaacttccg gggggcgcct caatcgaccc agtcgttcac ccgggcggta atgtcgggtg
      841 gcaatgtcaa accgagcttt gcgagcgcgg agcggcgaac gctgagtttg aactgcgttg
      901 cgcccgtaat cggcaattcc gcaggactcg cgccgtgcag gattttgtct acgtatttgg
      961 ccgctccata atacccttcg aaatgaccag ggcccagcga catcagcccg ccggccagga
     1021 cgtactctag gtcagtgtag atagccggta gtttgcgttt ttcggcctca gcggcgaggt
     1081 cgaaccggct ggagttaatg aagctatcga cggcattgac gacggccttc gcactaaaag
     1141 ctgcggctcg atcaaaggcc ggtccaacat catctggctt gcgaatatcc accgccaaga
     1201 cttcaatgcc aaggtcgcga gcttccgacc gaacccgcgc tacctgagcg ggattgttgg
     1261 cattgttgcc attcatcacc atggcgatct tgtcgagatt tggaatcatg gtcttgagta
     1321 ttcgcaatcg ctcgccgatc aattgcggcg cgtacatcgt ggtgccggtc acgttggtac
     1381 cgggaccgtc gagactcttc acaagcccga gtccaactgg atcgttgacg gcaagcatta
     1441 cgatcggaat gttggtggtt gcccttgcag cagcgacagc tgctggcgca ttggcggcca
     1501 ggatgatgct tactttgcga tctacaaact cggccaccag acgctgatag tcagcatcaa
     1561 gcacgccttc gcgatattca atccgaacat tcttgccctc aacgtatcca agctccgcca
     1621 aacctctttt gaatacgtca agccgatcgg gatttgcgcc cttggcagcc acatagccca
     1681 acgtcggcgc caattgagcg acactgtccg cgataggaca aagggccaag agcgctagag
     1741 aaaggaacgc ccggcgcgtg gataataagc aatggtcgat catcgtcatg atcgtgctcc
     1801 ccacacgccc taatcaccta gcgccgcagg acgaaaaagt tgcgcaacag cgccgccgct
     1861 tcgctctcgc cgatgccgcc atagacctcc ggccggtgca cgcaggtggc ggcggagaaa
     1921 tagcgcacgc cgctctcgac cgcgccgccc ttcggatcgg cggcgccgta atagaggcgg
     1981 cggatgcgcg cgaacgagat cgccgccgcg cacatcgtgc agggttcgag cgtcacgtag
     2041 agatcgcagt cgacgagc
//
LOCUS       DATCWM010000301         2802 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_61668, whole genome shotgun sequence.
ACCESSION   DATCWM010000301 DATCWM010000000
VERSION     DATCWM010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2802
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61668"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1056
                     /locus_tag="VIQ50_05745"
     CDS             <1..1056
                     /locus_tag="VIQ50_05745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015599528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359917.1"
                     /translation="GFGEYLRSAVADGVHSGTGRTALSDDNSDYYPVPLNEETLRPGT
                     VYIDPYGHVLVLAKRVAQSDDAAGLLLAVDAQPDGTVARKRFWRGNFLFAQDPALGGP
                     GFKRFRPIVRDKNGGLRRMTNAEIAKDAQYGDFSLDQARLGIEEFYDRMDDVMSPAPL
                     DPLRAMKEAISALEEQVKARVTSVENARKFQGNGRDAEMPDGAAIFETNGAWEDFATP
                     ARDLRLLIAIDVVRTFPDRVARRTERYAMPKGKTVAEVKAELESVLASELAARKFAYA
                     RSDGSPWTLALKDVLDRAADLEMAYNLNDCMELRWGAPDKSSEAATCRRHAPSTQRAK
                     MIEYRSWFHERRRPPRA"
     gene            complement(1211..2185)
                     /locus_tag="VIQ50_05750"
     CDS             complement(1211..2185)
                     /locus_tag="VIQ50_05750"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9359918.1"
                     /translation="MKRFVVIGLLGGAVGVFGAAILPSVAPLALAQSYPSRPLNVIVP
                     FPPGGNTDIMARALQNEMSKALSQTMVIINKPGAAGTLGLIELSRAAPDGYTLALTPN
                     NPLTAQPHVQKLPYAMESFRYVCLTYFAPYVLIAGPQAPFKSFGEFVAFAKAKPEILI
                     YGHAGLASQPHLGMLAVLKAIGADGLGVPFTGAGPMAQALLSGTVMAITETPAVAAAS
                     NLPVLAALSDARIPALADVPTMTELGYPAASFTAGGLITPAGTSPAALGTLESACAQA
                     TARDEYKAIATRLNVEGRYLPGEAFRKLFAADSIENADAVQRAGLAMR"
     gene            complement(2239..>2802)
                     /locus_tag="VIQ50_05755"
     CDS             complement(2239..>2802)
                     /locus_tag="VIQ50_05755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359919.1"
                     /translation="GLALALTAGVAAAIAGYLALAAPPAADKVTGDTSAARAIWTEVS
                     WPFPLDQWGTGRAFACKAADCGADLKLYLRAKLGACNCAAGVADDEDLDRMSDFDLLN
                     GEVSPFGAGRPITVGWMKGRSRAYAISAPRRPANSAISVVFNDRCDMIVATAVAPHDR
                     PAIIEPNVMAFLNSRTVLHWAELALGI"
BASE COUNT          468 a          907 c          983 g          444 t
ORIGIN      
        1 ggatttggcg agtacttgcg ctcggccgtc gccgatggcg tgcattccgg aaccgggcga
       61 acggcgttga gcgacgacaa cagcgattat tatcccgtgc cgctcaacga ggagacgctg
      121 cgcccgggga ccgtgtacat cgatccctac ggccatgtcc tggtgctggc gaagcgcgtg
      181 gcgcagtcgg acgacgccgc gggcctgttg ctcgccgtcg atgcgcagcc ggacgggacg
      241 gtcgcgcgca aacgtttctg gcgcggcaat ttcctgttcg cgcaggatcc cgcgctcggc
      301 ggacctggct tcaagcgctt ccgcccgatc gtgcgcgaca agaacggcgg cttgcggcgg
      361 atgaccaacg ccgaaatcgc caaagacgcc cagtacggcg acttctcgct tgatcaggcg
      421 cggctcggaa tcgaagagtt ctacgaccgc atggatgacg tgatgtcgcc tgcgccgctc
      481 gatccgttgc gcgccatgaa ggaggcaatc tcggcgctcg aagagcaggt caaggcgcgc
      541 gtgacctcgg tcgagaacgc gcgcaaattc cagggcaacg ggcgcgatgc cgagatgccg
      601 gacggggcgg cgatcttcga gaccaacggc gcgtgggaag atttcgccac gcccgcgcgc
      661 gacttgcgtc tgttgatcgc aatcgacgtg gtgcgcacct tcccggaccg cgtcgcccgc
      721 cgaaccgagc gctacgcgat gccgaagggc aagaccgtcg ccgaggtgaa ggccgaactc
      781 gagagcgtgc tcgcctcgga gctcgcggca cgcaagttcg cctatgcgcg cagcgacggg
      841 tctccctgga cgctcgcgct caaggacgtg ctcgaccgcg cggcggatct cgagatggcc
      901 tacaacttga acgactgcat ggagctgcgc tggggcgcgc cggacaagag ctccgaggcc
      961 gcaacctgcc ggcggcacgc gccgtcgacg cagcgcgcga agatgatcga gtaccgcagc
     1021 tggttccacg agcggcgccg cccgccgcgc gcctagcacg gtccagcagg ctcgatctgc
     1081 tccctctcgc tcaccctaac cctctcccca aacggggaga gggaacgcac cgaaatcgtt
     1141 gcgctgttat cgacccctca ttgtgaaact gctttcgccg ccggcgcgcc cggagcgggc
     1201 ggagccgtac tcacctcatg gcgaggcctg cgcgttggac cgcatcggcg ttttcgatcg
     1261 aatctgccgc gaacagcttg cggaatgctt cgcccggcaa atagcgcccc tcgacgttga
     1321 gcctcgtggc gatggccttg tattcgtcgc gcgcggttgc ctgcgcgcac gcgctttcca
     1381 gggtgcccag cgccgccggt gaggtgccgg ccggagtgat caagccgccg gcggtgaacg
     1441 atgcggcggg atagccgagc tcggtcatcg tgggcacgtc ggcgagcgcg ggaatgcgcg
     1501 cgtccgacag cgcggccagg accggcaaat tgctcgccgc cgcaaccgcc ggcgtttccg
     1561 tgatcgccat cacggtcccg ctgagcagtg cctgcgccat cggtccggcg ccggtgaacg
     1621 gcacgccaag cccgtcggcg ccgatcgcct tgagcaccgc aagcatgccg agatgcggtt
     1681 ggctggcgag tcccgcatgg ccatagatga gaatttccgg cttcgccttg gcgaaggcga
     1741 cgaactcgcc gaaagacttg aacggggcct gcggtccggc gatcaacaca tagggcgcga
     1801 aataggtgag gcagacgtag cggaagctct ccatcgcgta gggcagcttc tgcacgtgcg
     1861 gctgcgcggt gagcggattg tttggcgtca gcgccagcgt gtagccgtcg ggcgcggccc
     1921 ggctcagttc gatgaggccg agcgtgccgg cggcgccggg cttgttgatg atgaccatgg
     1981 tctggctcag cgccttggac atttcgttct gcagcgcgcg cgccatgatg tcggtgttgc
     2041 cgccgggcgg aaacggcacg atcacgttga ggggccggct gggatagctc tgcgccagcg
     2101 cgaggggtgc gacacttggg aggatcgcgg cgccgaacac gcctactgcg ccgccgagaa
     2161 ggccgatgac gacgaaccgt ttcatgtgcg gcgggatcgc gtgcgcgcgc aaaaatcggt
     2221 gtgcgccaat ggggcagctc atatccccag cgccagctcc gcccaatgca ataccgtcct
     2281 gctgttgaga aaggccatga cgttgggctc gatgatcgcc ggtcggtcgt gcggggcgac
     2341 cgcggtggcg acgatcatgt cgcagcgatc gttgaagacg acggatatcg cggagttggc
     2401 gggccgacgg ggcgcggaga tggcgtaggc gcgactgcga cccttcatcc agccgaccgt
     2461 gatgggtcgg ccggcgccga agggcgaaac ctcgccgttg aggagatcga agtcgctcat
     2521 gcgatcgagg tcctcgtcat cggcgacgcc ggctgcgcag ttgcaggcgc cgagcttggc
     2581 acgcaggtag agcttaagat cggcaccgca gtcggccgcc ttgcacgcaa acgcgcggcc
     2641 cgttccccat tggtcgaggg ggaacggcca gctcacctcg gtccagatcg cacgggcggc
     2701 ggaggtgtcg cccgtcacct tgtccgcggc tgggggcgcg gcaagcgcca aatatccggc
     2761 gatcgcggcg gcgactcccg ccgtcagtgc gagcgccaat cc
//
LOCUS       DATCWM010000302         5211 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_369548, whole genome shotgun sequence.
ACCESSION   DATCWM010000302 DATCWM010000000
VERSION     DATCWM010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5211
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_369548"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1443)
                     /locus_tag="VIQ50_05760"
     CDS             complement(<1..1443)
                     /locus_tag="VIQ50_05760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase family protein"
                     /protein_id="HEY9359920.1"
                     /translation="MPDTTIRPAADADEAPLFSAPYAPPDEAIAAGLLREASRAAEAE
                     RRIDAYARHLVEGIRARAGGLGGLEDFLHAYSLSTKEGLALMVLAEALLRVPDAATAD
                     RLIEDKLATGHWSSHHVKSSALLVSASAWTLGITARIIHPGETPDTILESLIKRLGIP
                     AVRAATRQAMRLLASHFVLGQTIEDALDRARSQRAARYSFDMLGEGARTRADAERYFA
                     AYAHAIDAIATNGGEAASRPGISVKLSALHPRFEAISRGLVLSELVPKALELARKARA
                     HRLNFTIDAEEADRLELTLDVMAAVLADSSLRGWDGFGLAVQAYQKRAPAVIDWLDDI
                     AKSLGRRLTVRLVKGAYWDTEIKRAQERGLADYPVFTRKAMTDLCYAACTRKLLAARP
                     RLYPQFATHNALTVASVIEDAGGVEGYEFQRLHGMGEVLYQLLLADYPQAACRVYAPV
                     GGHRDLLAYLVRRLLENGANSSFVSVAADPA"
     gene            1697..2728
                     /locus_tag="VIQ50_05765"
     CDS             1697..2728
                     /locus_tag="VIQ50_05765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359921.1"
                     /translation="MRLFKLTRINRHAALLAALIALTAVRPAVAQTSIKFSLDGRLEG
                     LAATFFLPQDRGYFKSEGLDVTVDEAATALEPITRVASGAYEMALADINTLIRYRDQH
                     PSSPLKAVFMLYNKPPFAIVARRSRGITDPKQLEGKKLGTPPVGITFEWPLFAKLNNV
                     DAAKVTIETIGFPVRAPMLAAGQIDAALGYSFRLYVDLKDRGVPVDDIVLMPMADYGL
                     KLYGNAIIVNPKFAAEKPEAVRGFLHAFLQGLKEIVHRPAEAVDTIMRRDDTVKRDVE
                     LERLRMAIRDNIVTPEVRANGFGAVDLARLAESIDQIGLVYTFKAKPKAEDIFDASFL
                     PPASERKVH"
     gene            2853..4655
                     /locus_tag="VIQ50_05770"
     CDS             2853..4655
                     /locus_tag="VIQ50_05770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015441 - ABC-type beta-glucan transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015775 - beta-glucan transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucan ABC transporter ATP-binding protein/
                     permease"
                     /protein_id="HEY9359922.1"
                     /translation="MKYFRLYFRVLELLGREARLGWVLAVANLALASAMFVEPILFGR
                     IVDTLASAQPRVSQVAWRELMLLVGAWVAFGLFIIMCGTLVALHADRLSHRQYQVVRT
                     MFFEHVLQLPLSYHTGSHSGRLVKVMLTGTSTLWALWLAFFREHFASFVSLIVLLPLT
                     LFINWRYGSALILLSIIFAAVIAHVISKVERLQSTVERYYTDVAERTSDTLGNIALVQ
                     SFARIEMEVLGMKKLGEEALSAQIPVLSWWAVTTVITQASTTLTMLSILVLGVYFYLR
                     DLTTVGEIVMFMSFATLLITRLEQAVQFANRLVMDAPRLAEFFDVLDTEPAVRDRPDA
                     VDPGRIRGLVEFKDVSFSYDGKRPAVADLSFTALPGETVALVGATGAGKSTALALLHR
                     AFDPQSGTVSIDGVDVRALTLTGLRRNIGVVFQEALLFNRSVAENLCVGKPDASDEEL
                     RAACERAQVLDVIERLPQGFASNVGERGRLFSGGERQRLSIARALLKDPPILILDEAT
                     SALDALTEARIQAALTEVMKGRTTFVIAHRLATVRNANRILVFHGGRIVEGGRFDELI
                     QRGGYFAELAHSQFMAGDPAKKRYELASGQPVET"
     gene            4655..>5211
                     /locus_tag="VIQ50_05775"
     CDS             4655..>5211
                     /locus_tag="VIQ50_05775"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEY9359923.1"
                     /translation="MLRNQPSQAAGQGDHPLRSCEFWLRIPADRPLTSVFLLALLVRL
                     INVSLLANRDAFFAEQDTLAYWMLGAALAKPETFWPTLSAMTDRMPLYPLLLAAVQHA
                     FGDAPRAVALIQAAMDAATCALIAALGALISPRVGLIAGTLAALSPTLIVFSTQILTD
                     SLFLFFFTLMLVAGARFLLRPGAGLA"
BASE COUNT          862 a         1705 c         1680 g          964 t
ORIGIN      
        1 cgccggatcg gcggcaaccg acacgaacga ggagtttgcg ccgttctcca gcaggcgacg
       61 caccagatag gcgaggaggt cgcggtgccc gccgaccgga gcatagaccc ggcacgccgc
      121 ttgggggtaa tcggcgagca agagctggta gagcacctcg cccatgccgt gcaggcgctg
      181 gaactcatag ccctcgacgc cgccggcgtc ttcgatcacg ctggcgacgg tgagcgcgtt
      241 gtgggtggcg aattgcggat agagccgcgg ccgcgcggcg agcagcttgc gcgtgcaggc
      301 ggcatagcag aggtcggtca tcgccttgcg tgtgaacacg ggatagtcgg caaggccgcg
      361 ctcctgcgcg cgcttgattt cggtgtccca gtaggcgccc ttgaccagcc gcaccgtcag
      421 ccggcggccg aggctcttcg cgatgtcatc gagccagtcg atcacggcgg gagcgcgctt
      481 ctggtaggct tgcacggcaa gcccgaagcc gtcccaaccg cgcagcgagc tgtcggcgag
      541 caccgccgcc atcacgtcaa gggtgagctc gagccgatcg gcttcctcgg cgtcgatggt
      601 gaaattgagg cggtgcgcgc gcgccttgcg cgcaagctcg agcgccttcg gcacaagttc
      661 gctcagaacc agcccgcgcg atatggcctc gaagcgcgga tgcaaggcgg agagcttgac
      721 cgaaatgccg ggacggctcg cggcttcgcc gccgttcgtg gcgatggcat cgatggcatg
      781 agcgtaagcc gcgaaatagc gctcggcatc cgcccgcgtg cgcgcaccct cgcccagcat
      841 gtcaaaggag tagcgcgctg cccgctggct gcgggcgcga tcgagcgcgt cctcgatcgt
      901 ctgtccgagc acgaaatgcg aggccaatag ccgcatcgcc tggcgtgtgg ccgcccgcac
      961 agcgggaatc cccaggcgct tgatcaggct ttccaagatc gtgtcggggg tctcgccggg
     1021 atggatgatg cgggcggtga tgcccagcgt ccacgccgat gccgacacca gaagcgcgct
     1081 cgatttgacg tggtgcgacg accaatggcc ggtcgcgagc ttgtcctcga tcagtcggtc
     1141 ggcggtggcg gcatcgggca cccgcagcag cgcctccgcc agcaccatga gggcaagtcc
     1201 ctctttggtg gacaacgaat aggcatgcag gaaatcctcg aggccgccga gccccccggc
     1261 gcgcgcccga attccctcga ccagatgcct ggcataagcg tcgatccgtc gctccgcctc
     1321 ggccgcgcgg ctcgcttcac gcagcaagcc ggccgcgatc gcctcatccg gcggtgcgta
     1381 gggggcgctg aagaggggcg cttcgtctgc atccgcggca gggcgaatag tcgtatctgg
     1441 catcatatcg gttggcattt ggggggcgcg tccacccgcg ccaagcctcg ttaatcttaa
     1501 cagcggttca tctggcgcgg ccgaagaata actcgcatgc gggcacaaag tggcatggcg
     1561 cggtgtttga aatctgtgaa ggatgggcac gaggcgcgat gtcgccttgc gctttgtagc
     1621 atcatgttct ttatctggcc gcctcagccg cggtttaagg cgggggcggc gcggggctga
     1681 cgcagaggga gcagccatgc gcctcttcaa gctcacgcgg atcaatcgcc acgccgcgct
     1741 cctcgcggcg ctgatcgcgt tgaccgcggt gcggcctgcc gtggcgcaga ccagcatcaa
     1801 gttctcgctc gatggccgcc tcgaaggact ggccgcgacc tttttccttc cccaggaccg
     1861 gggctacttc aagagcgagg ggctcgacgt caccgtggac gaggccgcga ccgcgctcga
     1921 accgattact cgcgtggcgt ccggcgccta tgagatggcg cttgccgaca tcaacacact
     1981 catcaggtac cgcgatcaac atccctcgtc gccgttgaag gcggtgttca tgctttacaa
     2041 caagccgccc ttcgcgatcg tggcgcgccg cagccgcggc atcaccgatc ccaagcagct
     2101 cgaaggcaag aagctcggca ctccgcccgt cggcattact ttcgaatggc cgctgttcgc
     2161 caagctcaac aacgtcgacg cggcgaaggt gacgatcgag accatcggct ttccggtgcg
     2221 cgcgccgatg ttggcggccg ggcagatcga tgccgcgctc ggctactcgt tccgcctcta
     2281 cgtcgatctc aaggaccgcg gcgtaccggt cgacgacatc gtgctgatgc cgatggcgga
     2341 ttacgggctc aagctctacg gcaatgccat catcgtcaat cccaaattcg ccgccgagaa
     2401 accggaggcg gtgagggggt ttttgcacgc ctttcttcag ggcctgaaag aaatcgtcca
     2461 ccgccccgcc gaggcggtgg acacgatcat gcggcgcgac gacaccgtga aaagggatgt
     2521 cgagctcgaa cgcctgcgca tggccattcg cgacaacatc gtcacgccgg aggtcagagc
     2581 caacggcttt ggcgccgtcg atctcgcgcg gctcgccgaa tcgattgatc agatcgggct
     2641 ggtctatacc ttcaaggcca agcccaaggc ggaggacatt ttcgacgctt ccttcctgcc
     2701 gcccgcctca gaacgcaagg ttcattgagc aggcggcctg gaagagttct ccgtcaaacg
     2761 ccttggccat cgcgcgcccc tctggttggg gcgcacacga aacatgctat aaatctctcc
     2821 atgcagagcg ttcgcgtttt gccgccggcc gtatgaaata cttccgcctt tacttccgcg
     2881 tgctcgaact gctcggacgc gaggcgcgtt tgggctgggt gctggcagtc gccaatctgg
     2941 cgctcgcctc ggcgatgttc gtcgaaccca tcttgttcgg ccgcatcgtg gatacgctcg
     3001 ccagtgccca accgcgcgtc tcgcaagttg cctggcggga gttgatgctg ttggtcggcg
     3061 cctgggtggc atttggcctt ttcatcatca tgtgcggcac gctcgtggcg ttgcatgccg
     3121 accgcctgtc gcaccggcag tatcaggtgg tgcgcacgat gttcttcgaa cacgtcctgc
     3181 agctgccgct gagctaccac accggctcgc attccggtcg gctggtgaag gtgatgctca
     3241 ccgggacgag cacgctgtgg gcgctctggc tggcgttctt ccgcgagcac ttcgccagct
     3301 tcgtatcgct gatcgtgctg ctgccgctga cgcttttcat caattggcgc tacgggtcgg
     3361 cgttgatcct gctgtctatc atctttgccg cggtgatcgc ccacgtcatc agcaaagtgg
     3421 aaaggctgca aagcacggtc gagcgctact ataccgacgt ggccgagcgc accagcgata
     3481 cgctcggcaa tatcgctctc gtgcagagct tcgcccgcat cgagatggaa gttttgggaa
     3541 tgaagaagct gggcgaagag gcgctgagcg cgcagatccc ggtactttcc tggtgggcgg
     3601 tgacgacggt gatcacgcaa gcgtcgacca cgctgacgat gctgtcgatt ctcgtgctcg
     3661 gggtctactt ctatctgcgc gatctgacca cggtcggcga gatcgtcatg ttcatgagct
     3721 tcgccacgct gctgatcacc cggctggaac aggccgtgca attcgccaat cgcctggtga
     3781 tggacgcccc gcggctcgcc gaattcttcg acgtgctcga caccgagccg gccgtgcgcg
     3841 accggcccga tgccgtggat cccgggcgca tacgcggctt ggttgaattc aaggacgtgt
     3901 cgttttccta cgacggcaag cgtcccgcgg tcgccgatct gagcttcacc gcgctaccgg
     3961 gggaaacggt tgccctcgtc ggcgcgaccg gagcgggcaa atcgaccgcg cttgccctgc
     4021 tgcaccgcgc ctttgatccg caatccggca cggtgagcat cgacggcgtg gacgtacgcg
     4081 ccctcacgct gaccggcctg cggcgcaata tcggagtggt gttccaggag gcgctgctgt
     4141 tcaaccgctc ggtcgcggag aacctgtgcg tcggcaagcc cgacgccagc gacgaggaac
     4201 tgcgcgcggc ctgcgagcgc gcgcaggtcc tcgacgtgat cgagcgcctg ccgcaaggtt
     4261 ttgccagcaa tgtcggtgaa cgcggacgct tgttctccgg cggagagcgc cagcgcctgt
     4321 cgatcgcgcg ggcgctgctc aaggatccgc caatcctcat tctcgacgag gcgaccagcg
     4381 cgctcgacgc gctgaccgag gccagaatcc aggcggcgct gaccgaggtg atgaaaggcc
     4441 gcacgacctt cgtcatcgcg caccgactcg ccaccgtccg caacgccaac cgcatcctgg
     4501 tgtttcatgg cggccgtatc gtcgagggcg gccggttcga tgaactcatc caacgcggcg
     4561 gttacttcgc cgagttggcc cacagccaat tcatggcagg cgatccggca aagaagcggt
     4621 acgagctcgc gagcgggcag ccggtggaaa cctagtgctc aggaatcagc cgtcacaggc
     4681 cgcgggtcaa ggcgatcacc ctctccgcag ttgcgagttc tggctgcgaa ttcctgcgga
     4741 ccgtccgctg acgagcgtct ttctcctcgc ccttctcgtc cgactgatca atgtctcgct
     4801 gctggcgaat cgcgacgcct tcttcgctga gcaggacacg ctcgcttact ggatgctggg
     4861 ggcggcactg gcgaagccgg aaaccttttg gccgacgctg tcggcaatga ctgaccgcat
     4921 gccgctttat cccctgctgc tcgcggccgt ccagcatgcg ttcggcgacg ctccgcgggc
     4981 ggtggcgctg atccaggcgg cgatggatgc cgctacctgc gccctcatcg ccgccctcgg
     5041 cgcgctgatc tctccgcggg tcggattgat cgccgggacc ctcgccgcgc tgtcgcctac
     5101 gctcatcgtg ttcagcacgc aaatcctgac cgattcgctg tttcttttct tcttcaccct
     5161 gatgctggtc gccggcgcgc gctttctgct ccgccccggc gcgggactcg c
//
LOCUS       DATCWM010000303         3488 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_158940, whole genome shotgun sequence.
ACCESSION   DATCWM010000303 DATCWM010000000
VERSION     DATCWM010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3488)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3488)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3488
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158940"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..751)
                     /locus_tag="VIQ50_05780"
     CDS             complement(<1..751)
                     /locus_tag="VIQ50_05780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ligase"
                     /protein_id="HEY9359924.1"
                     /translation="MNRALSAIPANRVRLASIADGLVTAVAVSLPWSTSATGILVVLW
                     LIALLPVLDPAAVRREVLSPAGGLPVLLWALGALGMLWADVSWSERIAGLSGFHKLLF
                     IPLLLAQFRRSGQARWAIIGFLASAVVLLVVSWLLIFIPALYWRGIRSPGVPVKDYIM
                     QSGIFAICAFGLIGQAAEVWRTRARLSLVLLVLAAAFIANIVYVSTARTTLVVLAVML
                     LLWGVRQFGWKGSLVAALIGIALAGAVWASSP"
     gene            complement(807..1577)
                     /locus_tag="VIQ50_05785"
     CDS             complement(807..1577)
                     /locus_tag="VIQ50_05785"
                     /inference="COORDINATES: protein motif:HMM:NF016908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HEY9359925.1"
                     /translation="MRLAILLRRLVTVRLAYPDGALDVMRWGLRLRLHPRDNGCEKNL
                     LFTPQMYETTELAELTVEIARANRLRAGFVFVDIGANVGLFSFFVAACAGSSARILAV
                     EPEKGNLERFFFNMRANPGLPIRVVSAALAGEAGMLAVEPDLRDRGGTRVHQSMYGGA
                     VTVEAKTLLQLLTQEGMESVDALKIDVEGMEDSILSSFFRDAPQRLWPRFILIEDART
                     VWDTDLFSLLAEKGYSVASRSRQNVMLWSQRSLALESC"
     gene            complement(1720..2583)
                     /locus_tag="VIQ50_05790"
     CDS             complement(1720..2583)
                     /locus_tag="VIQ50_05790"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEY9359926.1"
                     /translation="MPDLISVIVATYDREDALDAVLWGLSHQSDRDFEVVIADDGSCS
                     TTAALVEGWRSRLGVPLSHVWQRNCGFRAAEIRNRAILACRGDYCIFLDGDCIAAADF
                     IATHRRLAEPGWFVTGNRVLLSPALTDAVLRNKLRPQAWSAWRWIRHRLSGGVNRLAA
                     LLRLPLGPLRKLRPRQWRGARSCNLAVWRSDLERIDGFDACFTGWGREDSDLLIRLLR
                     CGLRRKDGRFATGVIHLWHPPFDRAQLAANDARLDAVLQSDRTGAQRGLSALRTAMLA
                     EGGAQSEKASD"
     gene            2666..>3488
                     /locus_tag="VIQ50_05795"
     CDS             2666..>3488
                     /locus_tag="VIQ50_05795"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEY9359927.1"
                     /translation="MQKISAYILAFNEAEKIADAVSSVLWADEIIVADSGSTDRTAEI
                     AQSLGARVVQLPFDGFGDLRNRAIAECRHEWIFSLDSDERCTAEIRDEILGILSSVAS
                     HDAYLVPRRNYMMGRWIKGSGWYPNFRQPQLFRNGAMRYNDDPVHEGYQLLTKRPLGR
                     LQGAIWQFPFRNLEEIIHKMNRYSSLGVQKLAGKRVSMGGALGHGAWAFLKHYLFKQG
                     YRDGWAGFIIALGNFEGTFYRYAKHYEEMQTWSAPPTVPLRRPSPAAAPNPTPAAE"
BASE COUNT          765 a         1100 c         1074 g          549 t
ORIGIN      
        1 agggtgagga tgcccacact gcacccgcga gggcaatgcc gatcagcgcg gcgacgagac
       61 ttcccttcca tccgaactgc cgtacccccc acagcagcag catgaccgcc agaacgacga
      121 gggttgtgcg ggcggtggac acatagacga tgttggcaat gaacgccgcc gccaagacga
      181 gcagcaccag cgaaagccga gcccgcgtgc gccacacctc ggccgcctgc ccgatcagcc
      241 cgaaggcgca aatcgcaaag atgccgctct gcatgatgta atctttgacc ggcacgccgg
      301 gcgaccggat gccgcgccag tacagagcgg ggatgaatat gagcaaccac gagacgacga
      361 gcagtacgac cgcggacgcg agaaatccga tgatcgccca tctcgcctgg cccgagcggc
      421 ggaattgcgc gagcagtaac gggatgaaaa gcagcttgtg aaatccgctc aagccagcga
      481 tgcgttcgct ccagcttacg tcggcccaca gcatgccaag cgcgccgagc gcccacagga
      541 gcacgggcag gccgccagcc ggcgacagca cttcccggcg taccgcggca gggtcgagga
      601 ccggaagcag cgcaatgagc cagagcacga ccaggatgcc ggtcgcggaa gtcgaccacg
      661 gcagtgaaac cgcgaccgcg gtgacgagcc catcggcgat ggaggcaagc cgcacacggt
      721 tggcggggat ggccgataat gctctgttca tgatgcgaga cagactttcc gccagcccat
      781 tgggaggcaa ttgccgcggc agcgagtcag cagctctcga gcgcgagaga ccgttgcgac
      841 cacagcatca cgttctgtcg actgcgggat gccacgctgt agcctttctc agcaagcagc
      901 gaaaacagat cggtatccca tacggtacga gcgtcctcaa tcaagatgaa gcggggccaa
      961 agccgttgcg gggcatcgcg gaagaacgag gatagaatgc tgtcttccat gccctcaacg
     1021 tcaatcttga gcgcgtcgac cgactccatg ccttcttgcg tcaacagctg cagcaatgtc
     1081 ttggcctcga ccgtgactgc cccgccgtac atggattgat gcacgcgggt accaccccga
     1141 tcgcgcagat caggttcgac ggcaagcatg ccagcctcgc cggcgagcgc cgccgagacg
     1201 acacggatcg gcagtcccgg attggcccgc atattgaaga aaaagcgctc caggtttccc
     1261 ttctccggtt cgacggccaa gatgcgagcg ctcgacccag cacaagccgc gacgaaaaaa
     1321 gagaacaagc cgacattggc accgatatcg acgaacacaa agccagcgcg gagcctgttg
     1381 gcgcgggcga tctcaaccgt cagctcggcg agctcggtgg tttcatacat ctgcggcgta
     1441 aatagcagat tcttctcaca tccgttgtcg cgcggatgca ggcgcagacg caagccccaa
     1501 cgcatgacgt cgagggcccc gtccgggtaa gcgagccgga cagtcacgag cctgcgcagc
     1561 aggatggcaa gccgcaatcc cagccaattg ttcggcagac ggctggtcaa tgtgatgacc
     1621 gcacggtcga actgttgggg agccagtgcg ccgaaggttg agctttcgat cgaagcagcc
     1681 atcgttcaga catcaattgc ggcagcataa gacaggcaat tagtctgacg ctttctcgga
     1741 ttgggcgcca ccctctgcaa gcatcgcagt ccgcagcgcg gagaggccgc gctgcgcacc
     1801 tgtgcggtcg ctttgcaata cggcatcaag gcgcgcgtca ttagcggcca attgcgcgcg
     1861 gtcgaacggc ggatgccaga gatgaatcac gccggtggcg aaacgcccgt ccttgcggcg
     1921 caggccgcaa cgcaacaacc ggatcagcag atcggaatct tcacgccccc agccggtgaa
     1981 gcaggcatcg aagccgtcga tccgctcaag atcagaacgc caaacggcga ggttgcagga
     2041 acgcgcaccg cgccactgtc gcggccgcag cttgcgcaaa ggtccgagcg gcaaccgtag
     2101 caatgccgcc agccgattga ccccgccgct caagcggtgc cggatccagc gccacgcgct
     2161 ccacgcctgg ggtcgcaact tattgcgcaa cacggcatcg gtaagggccg gcgagagcag
     2221 cacgcggttt ccggtgacga accatccagg ctcggccagc ctgcgatgcg tggcgatgaa
     2281 atcggccgcc gcgatacagt cgccgtcaag gaagatacaa taatccccgc ggcaggcgag
     2341 aatggcgcgg ttgcggattt ccgcggcgcg aaagccgcag ttcctctgcc agacgtggct
     2401 gagcggaacc ccaagacgcg agcgccagcc ttccaccagg gccgcggttg tagagcacga
     2461 gccgtcgtcc gcgatcacaa cctcgaaatc gcgatcgctc tggtgcgaca atccccacaa
     2521 gaccgcgtcg agcgcgtcct cccgatcgta cgtcgcgaca atgacggaga tgagatcggg
     2581 cacgtcacta ctccggggtt tcgtcctgca tgaggcgcgg cgctgtgata gcgtgcgctg
     2641 cggtcgggct caataacgag gaaccatgca aaagatatcg gcctatatcc tcgcctttaa
     2701 cgaggccgaa aaaatagcgg atgccgtgtc gagcgtgctg tgggccgacg aaatcatagt
     2761 ggccgattcc ggcagcaccg accgcaccgc cgagatcgcg caaagcctcg gcgcgcgggt
     2821 ggtacagctg cccttcgacg gttttggcga cttgcggaat cgtgccatcg cggaatgccg
     2881 gcacgagtgg atcttcagcc tcgattctga tgaacgctgc acggccgaaa ttcgcgacga
     2941 gattctcggc attttatcgt cggtagcctc gcacgacgcc tacctcgtgc cgcgccgcaa
     3001 ttatatgatg ggacgttgga tcaagggctc gggttggtac ccgaacttcc gccagccgca
     3061 gctcttccgc aacggcgcga tgcgctataa cgacgatccc gtccatgaag ggtaccaact
     3121 cttgacgaaa cgcccgctcg ggcggttgca aggcgccatc tggcagtttc cctttcgcaa
     3181 cctcgaagag atcatccaca agatgaaccg ctactcatcg ctcggggtgc aaaagcttgc
     3241 aggaaagcgg gtatcgatgg gcggcgcgct cgggcacgga gcgtgggcgt tcctaaagca
     3301 ttacctgttc aagcagggtt accgcgacgg gtgggcgggt ttcatcatcg cgttgggaaa
     3361 cttcgaaggt acattttatc gttacgccaa acattatgag gaaatgcaaa cgtggtcagc
     3421 gccgccaact gtgccgctcc gacgaccatc gccggctgcg gcgccgaatc ccacccccgc
     3481 cgcggaac
//
LOCUS       DATCWM010000304         4850 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_185988, whole genome shotgun sequence.
ACCESSION   DATCWM010000304 DATCWM010000000
VERSION     DATCWM010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4850)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4850)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4850
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185988"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1212)
                     /locus_tag="VIQ50_05800"
     CDS             complement(<1..1212)
                     /locus_tag="VIQ50_05800"
                     /inference="COORDINATES: protein motif:HMM:NF014071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEY9359928.1"
                     /translation="MDLGIRLAADVGGTFTDVAAFDETTGELRLGKTLTTPNRLVSGV
                     EAAVTKAGTQFSCARLFLHGTTVAINTILERTGALCALLTTQGFRDIYEIGRVNRPES
                     YNLFFRRHQPLIERDLRYEVRERMDAQGKVLIALGEEQVRAAVADAAGQGVQAIAILF
                     LHSYRNPTHEQRVKEIIEESHSHLFVTASHELSQEYREFERTSTAAANAYIGPRVRGY
                     LGEMGEHLEAAGFAGDFLIVQSTGGLFGVEEAQSACIRMLESGPAAGVIGTKALCDGI
                     GLKNAIAFDMGGTTAKAGVIHDGSVLMTGNALVGGYATGLPVQIPMIDIQEVGTGGGS
                     IARAEMGALTVGPESAGAQPGPVCYGLGGAEPTITDANLILGRLGAERFLGGEIKLDA
                     DGARRALATRVA"
     gene            complement(1254..2309)
                     /locus_tag="VIQ50_05805"
     CDS             complement(1254..2309)
                     /locus_tag="VIQ50_05805"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEY9359929.1"
                     /translation="MEFGVFDHLDRYDGALADYYEDRLKIAEAYDRAGFHAYHLAEHH
                     STPLGMAPSPSVFLAAVAERTRRLRFGPLVWPMPLHHPLRLIEEICMLDQLSGGRLDI
                     GFGRGAAPIELEYYGVAPQDAQEIYAEAVELVIKGLTHKVLDFKGRRFSFSGVPMELE
                     PLQKPHPPIWYGLHAPESAERAARRGLNVVSLDPTNEARLAIERYRAVWRQAQAPASS
                     LPKLGLGRFIVVAPSDAAALALAHRAYLVWHASFTHLFRRHGRAQSHPRPATFDLLAE
                     RGQGIAGSPATVAEFLAREISATGCNYVVGQFAFGDLALEESLRSIGLFAGEVIPLLR
                     AKAAGAAAASVAARGGG"
     gene            complement(2349..3602)
                     /locus_tag="VIQ50_05810"
     CDS             complement(2349..3602)
                     /locus_tag="VIQ50_05810"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012590417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HEY9359930.1"
                     /translation="MPQEDSKRREVKKVVLAYSGGLDTSIILKWLQTNYGCEVVTFTA
                     DLGQGEELKPAREKALLLGIKPQNIFIEDLREEFVREYVFPMFRANALYEGTYLLGTS
                     IARPLIAKRQIEIAEKVGADAVAHGATGKGNDQVRFELSYYALKPDVTVIAPWREWEL
                     RSREALIAFAEQHQIPIAKDKRGEAPFSVDANLLHASSEGKVLEDPSQEVPDYVYSRT
                     LDPQAAPDRPAYVEVEFERGDAVALDGKRLSPAHLLAALNALGRAHGIGRLDLVENRF
                     VGIKSRGMYETPGGTILLAAHRGIESITLDRGAAHLKDELMPKYAELIYNGFWFTPER
                     EMLQAAIDASQEFVTGTVRLKLYKGQVAAVGRSSPYSLYDRELVTFEEGNVAYDHRDA
                     EGFIRLNALRLRTLAQRKKKLKPER"
     gene            3807..4505
                     /locus_tag="VIQ50_05815"
     CDS             3807..4505
                     /locus_tag="VIQ50_05815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359931.1"
                     /translation="MSTEDDDFRASGPGLFGFLTDSDDDNIPVKAFGTVGYAPNVGVL
                     GFSGVAADPEGPIQQNGYSQRAGVEGGSVDFTGTAGVSLNRVGVYGQMEDSPPVPTGF
                     RAGVLGAASTQPGVIGFSRDGDGIEGASFTSTAVRAVSFFGPGVQSISGALNGVSGIS
                     GTQGPPVANTSDIAGVRGTSDAANGVIGTSNRSIGVVGFSNNVGVFGQSTNPASFAGL
                     FAATSRSPARCPRQ"
     gene            4502..>4850
                     /locus_tag="VIQ50_05820"
     CDS             4502..>4850
                     /locus_tag="VIQ50_05820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359932.1"
                     /translation="MKNAVVSFPDGSKRVLHCMESPEHWFEDFGTAKLKGGRAVVKLD
                     ADFAKVITRDYRVFLTPEGDCRGLYVHRKTAVSFEVRELMGGESAVAFSYRVVGRRRD
                     ITRHRRFAKIETGL"
BASE COUNT          825 a         1564 c         1587 g          874 t
ORIGIN      
        1 ggcgacgcgt gtagcgagcg cgcgcctagc gccgtcggcg tcgagcttga tctcgccgcc
       61 gagaaagcgt tcggcgccca gccgtcccag gatgagattg gcatcggtga tggtgggctc
      121 ggccccgccc aatccgtagc acacgggacc gggctgggcg ccggcgcttt ccggcccgac
      181 ggtaagcgca cccatctcgg cgcgagcgat agacccgccg ccggtgccga cctcctggat
      241 atcgatcatc ggaatctgca ccggtaaccc ggtggcataa ccgccaacga gggcgttccc
      301 cgtcatcagc acgctgccgt catggatgac ccccgctttc gcggtggtgc cgcccatgtc
      361 gaacgcgatc gcgttcttga gcccgatgcc gtcacacagc gccttagtgc cgatgacgcc
      421 ggccgcgggc ccggactcca gcatgcggat gcatgcgctt tgcgcctcct cgacaccgaa
      481 cagtccgccg gtcgactgca cgatcaaaaa gtcaccggcg aaaccggcgg cctcaagatg
      541 ctcgcccatc tcgccgagat agccgcgcac gcgcggtccg atataggcgt tcgccgccgc
      601 cgtggaggtg cgctcgaatt cgcgatattc ctgcgaaagc tcgtgcgagg cggtgacgaa
      661 gagatgcgaa tggctttcct cgatgatttc cttcacccgc tgctcgtgag tgggattgcg
      721 ataggagtgg aggaatagaa tcgcgatcgc ctgcacccct tggccggcag catcggcaac
      781 cgccgcgcgc acttgctcct cgccgagcgc aatgagcact ttgccttgcg catccatgcg
      841 ttcgcggacc tcgtagcgca ggtcgcgctc gatcaacggc tggtggcgcc ggaagaagag
      901 attgtaggat tccggccgat tgacgcggcc gatctcgtag atatcgcgga agccttgagt
      961 ggtcagcaaa gcgcacagcg ctccggtccg ctccaaaatg gtgttgatcg cgacggtcgt
     1021 accgtgaagg aagaggcgcg cgcaggagaa ttgcgtgccg gccttcgtta ccgctgcctc
     1081 cacgccgctg accagccggt tcggggtggt gagcgttttt ccgaggcgta gctctccagt
     1141 cgtctcgtcg aaagcagcga cgtcagtgaa cgttccgcca acgtcggccg ccagccgaat
     1201 tcccaaatcc attccgctca acccaagctc cggctggctc tgatgggacg atatcaaccg
     1261 cccccacggg ccgcaacgct ggccgccgcc gcgccggccg ccttcgcacg gaggagcgga
     1321 atcacttcgc cagcaaaaag gccgatggat cgcaggcttt cctcgagcgc caagtcgccg
     1381 aaggcgaact gccccaccac gtagttgcat ccggtcgcgc tgatttcgcg ggcgaggaat
     1441 tcagcgaccg tggccggcga gccggcgatt ccctgtccgc gctcggcgag cagatcgaat
     1501 gtcgccggcc ggggatgcga ctgcgcgcgt ccgtgccggc ggaacaagtg agtgaagctc
     1561 gcgtgccaaa cgaggtaggc gcgatgcgcc aatgccaggg ccgcggcgtc gctcggcgca
     1621 acgacgatga agcggccgag gccgagcttg ggcaagctcg acgcgggtgc ttgggcttgc
     1681 cgccagacag cccggtaacg ctcgatggcg agccgcgcct cgttcgtcgg atcgaggctg
     1741 acgacgttga ggccgcgccg cgccgcgcgc tcggcgctct cgggcgcatg caagccatac
     1801 cagatcggcg gatgcggttt ctgcagcggc tcgagttcca tgggcacgcc gctgaaggaa
     1861 aatcgccggc ccttgaagtc gagcaccttg tgcgtcaatc ccttaatcac aagctctacc
     1921 gcttccgcgt aaatctcctg cgcgtcttgc ggcgcgacgc cgtagtattc gagctcgatg
     1981 ggcgcggcac cgcgcccgaa gccgatgtcg aggcgtccgc cgctcagctg gtcgagcatg
     2041 cagatttctt cgatcagccg caggggatgg tgaagcggca tcggccaaac cagcggcccg
     2101 aaccgcagcc gcctcgtgcg ctccgccaca gccgcgagga acacgctcgg cgatggcgcc
     2161 atgccgagcg gcgtcgagtg atgttcggcg agatgatagg cgtggaaccc ggcgcgatcg
     2221 taggcctcgg cgattttgag gcggtcctcg taatagtccg cgagggcgcc atcgtagcga
     2281 tcaagatgat caaagacacc gaattccatt ttttcaacgc ttgcgcagac ttactgacgc
     2341 cacgtgttct acctctccgg cttcagcttt ttctttcgct gcgccagggt ccgcaaccgc
     2401 agcgcgttca atcgaatgaa gccctcggcg tcgcgatggt cgtaggcgac gttgccttcc
     2461 tcgaaggtga cgagttcccg gtcataaagc gaatagggcg atgagcgccc gaccgcggcg
     2521 acctggccct tgtaaagctt gagcctgacc gttccggtca cgaattcctg tgacgcgtcg
     2581 atggccgcct gcagcatctc gcgctcgggt gtgaaccaga agccgttgta gatcagctcg
     2641 gcgtatttcg gcatcagctc gtccttgagg tgggctgcgc cacggtcgag cgtgatggat
     2701 tcgatgccgc ggtgcgccgc gagcaggatg gtgccgcccg gggtttcgta catgccgcgc
     2761 gactttatgc cgacgaaacg gttctcgacg agatcgagcc gcccgatgcc gtgggcgcgc
     2821 ccgagcgcat tgagcgcggc gagcaggtgc gcgggcgaaa gccgcttgcc gtcgagcgcg
     2881 accgcgtcgc cgcgctcgaa ctcgacctcg acgtaagcgg gccgatcggg ggccgcctgc
     2941 ggatcgagcg tgcgcgaata gacgtaatcc ggaacttctt gcgaagggtc ctccagcacc
     3001 ttgccttccg aggaggcatg cagcaggttg gcgtccaccg aaaacggcgc ttcgccgcgc
     3061 ttatccttcg cgatcgggat ctggtgctgc tcggcaaagg cgatgagcgc ctcgcgcgag
     3121 cgcagctccc attcccgcca cggtgcgatc accgtgacgt cgggcttgag cgcgtaatag
     3181 ctgagctcga aacgtacctg gtcgttgccc ttcccggttg cgccgtgcgc gacggcatcg
     3241 gcgccgacct tctccgcgat ctcgatctgc cgcttggcaa tgagcgggcg cgcgatcgag
     3301 gtcccgagga gatacgtgcc ctcgtagagc gcattcgccc gaaacatggg aaacacatac
     3361 tcgcgcacga actcttctcg caggtcctcg atgaagatgt tctgcggctt gatgccgaga
     3421 agcagcgcct tctcgcgtgc cggcttgagc tcctcgccct ggccgagatc ggcggtgaag
     3481 gtcaccacct cgcagccata gttggtctgc agccatttca aaatgatcga ggtgtcgagc
     3541 ccgccggaat aggcgagcac cacctttttc acctcgcgcc ttttggagtc ctcttggggc
     3601 atcgtcagct gcggtcggtc aatgatgccc cttcatgccg gacgactata gcgagtcgcg
     3661 gcgtgttcac caatcccgat cggctccccc cggccgatgt ccagatgatc agcgtggcac
     3721 tgcggcatcg tgtttggtcc gcggcgcgcg caagcgcgtt atggttggcg cgcggtcagc
     3781 cgcatgagat ttgatgggag gcgacaatga gcaccgaaga cgacgacttc agggctagcg
     3841 gacctggttt attcggcttc ctgacagact ccgacgacga caacattccg gtcaaggcct
     3901 tcggtaccgt cgggtatgcg ccgaacgtgg gcgtgctggg attttccggc gtcgcggccg
     3961 accccgaggg gccaatccag cagaacggct attcgcagcg cgcgggcgtc gagggcggct
     4021 cggtcgattt caccggcacc gccggcgtct cgcttaaccg agtgggcgtc tatggccaga
     4081 tggaggactc gcctccggtc ccgaccggat tccgcgccgg tgtcctcggc gcggcgagca
     4141 cgcagccggg cgtcatcggg ttctcgcgtg acggcgacgg catcgaaggt gcgtcgttca
     4201 cgagtaccgc cgttcgcgcc gtgtccttct tcggcccggg cgtacagagc atttcgggcg
     4261 cgcttaacgg cgtcagcggc atttccggca cgcagggacc gccggtcgcc aacacgtcag
     4321 acatcgccgg cgtccgcggt acgtcggatg cggcaaacgg cgtgatcggg acctcgaaca
     4381 ggtccatcgg ggtggtcggc ttttccaaca acgtcggcgt cttcggccag agcaccaacc
     4441 ccgcctcctt tgccggcctt ttcgcggcaa cgtccaggtc accggcacgt tgtccgcggc
     4501 agtgaaaaac gccgtggtat cgttccccga cggcagcaag cgggtgctgc attgcatgga
     4561 gagcccggag cattggttcg aggattttgg cacggcgaag ctcaagggcg ggcgcgcggt
     4621 ggtaaagctc gatgctgact tcgccaaggt gatcacgcgc gactatcgcg tattcctgac
     4681 gccggagggc gactgccgcg ggctatatgt gcaccgcaag actgctgtga gcttcgaggt
     4741 gcgcgagctt atgggcggcg aatcggccgt cgcgttctcc tatcgagtcg tcggcaggcg
     4801 ccgagatatc acgcgtcatc ggcgcttcgc caagatcgag acgggcctgc
//
LOCUS       DATCWM010000305         4283 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_369568, whole genome shotgun sequence.
ACCESSION   DATCWM010000305 DATCWM010000000
VERSION     DATCWM010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4283)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4283)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4283
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_369568"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            328..867
                     /locus_tag="VIQ50_05825"
     CDS             328..867
                     /locus_tag="VIQ50_05825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359933.1"
                     /translation="MAPSETVSLRFPADWAEPSAEPVVPKVTLASADPGILFSPQPTY
                     AANDAAAPNMIEAKAPPAAAPPPKVAVASLMPKPKPKPRSNAVLNDSQLTSIKRRLNL
                     TPEQERYWPAIEAELRKMEYTKSQGGTRTASIDMSKVNVEGLKSAGFSLVMSFSDDQR
                     RELKSLTHLLGLESVMAGF"
     gene            1025..2590
                     /locus_tag="VIQ50_05830"
     CDS             1025..2590
                     /locus_tag="VIQ50_05830"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HEY9359934.1"
                     /translation="MDMSVSVGAAAEAQPAKAEPRKATRGANSSDLDAWLEKAEALGE
                     LKRITAEVDPDLEAATITYLVGGEKSPALLFENIKGHPGHRALYNMVGCNLSRFCLMI
                     GEQPVDHPLKAVQILQQKLGRKVPPKEVSPDHAICNQNIVEGNDIDIRIFPAQRMWPL
                     DGGMYLGTGDAVVTKDPETGRINVGTYRMMIKGPREIGLYTSPGKDATLDREKWWKLG
                     KPMPVAACYGIDPLLFLVAATSLPKTECEYDYYGGINGAPIELFIGDVTGLPIPARAE
                     IVLEGFVYPDASFAEGPFGEFTGYYGRPGGATPYVKIEKVRYRSNPTLTCALMADGPA
                     NECGLFWAALRSAGIWGDLLKLGVPGIKGVWSIPEAAGWGITVVSIKQMYAGHAPQVM
                     ALAAQCTAGAYFGKYVIVVDEDIDPSNIHQVLWAMATRSRPAQSIDILRETWSTYLDP
                     SLNPPEIRPWGSKCLINACMDYRFIKTFSKRTKLSKQAYENVVSRWQELGLSGTPPVV
                     SVFEEETISDNVS"
     gene            2662..3942
                     /locus_tag="VIQ50_05835"
     CDS             2662..3942
                     /locus_tag="VIQ50_05835"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008125625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEY9359935.1"
                     /translation="MNEAFFAELSAWLAESSLAGTSDTDIVSGFCDRCVAAGLPLARA
                     LMFIDTLHPVHEGRLFRWGYGPTESPLLEYGRTSPEALAASGSGPQHVEQAQRWRDSA
                     HYKMVQTGDWFLRRRLNAAAIDEFPTLSDFLAAGMTDYVAIINRFAPQGVIGEMDGFY
                     SSWATRAPDGFSDGQIAVLQRTAPYLAVAIKSVSLARMTGTLMETYLGRDAGRRVLGG
                     RIVRGIAERIDAVVWFSDLRGFTRITDTAPEQAISLLNDYSDAIVSAIHEHGGDVLKL
                     IGDGTFAIFTAEDRAHACGAALSAAIAARAHVEELNRRRAAEGKPITHMYLGLHVGEV
                     FYGNVGSRERLDFTVIGPAVNEASRIAAMCRSVDQPVLMSSAFADVGDIKRRLVSVGR
                     YALRGVAHPQELFTLDPNAYPPDEGELPHARPPR"
     gene            3923..>4283
                     /locus_tag="VIQ50_05840"
     CDS             3923..>4283
                     /locus_tag="VIQ50_05840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015668696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkene reductase"
                     /protein_id="HEY9359936.1"
                     /translation="MQDLPAKTTSDLFTPIEVGALTLPNRIVMAPLTRSRAGAGNVPT
                     VLSALYYAQRASAGLIISEATQVAPEGQGYISTPGIHSAEQVAGWKCVTSAVQACGGR
                     MVAQLWHVGRISHPSFQP"
BASE COUNT          808 a         1333 c         1359 g          783 t
ORIGIN      
        1 ttgctttggc gcccatcgag atgcgcgaag tcgagtcatt cgactcacgc gggacacgtg
       61 ctaaccccct ctgggacaaa gagaaaggca ccgaagaaat gtcccggggc agccataatt
      121 acgcttggat tgcgaagaag atgaagcccc atggggaaaa cgggttgggg gaacatgcgc
      181 cggcgatcca gcggtatcag cacgagcgtg atggcgtgtc ttgccattat tggcggggca
      241 ggggtgggcg gtttggctgc ggggttcaat gtgcgcgcgg ggctttctcc gcaaccgtcg
      301 accaccgttg ttgcgtccat cgccaagatg gcgccctccg aaacggtgag tttgcgcttc
      361 ccggcagact gggcggagcc ttccgccgaa ccggtggtgc ccaaggtcac gctggcatcg
      421 gccgatcccg gcatcctttt cagtccgcaa ccgacctatg cagccaatga tgccgctgct
      481 ccgaacatga tcgaggcaaa ggcgccgccc gccgcagccc cgcctcccaa ggtggcggtt
      541 gcctcgctga tgcccaagcc caagccgaag ccgcgctcca atgcggtgct caacgattcg
      601 cagctcacca gcatcaagcg acggctcaac ctgacgccgg agcaggagcg ctattggccg
      661 gcgatcgaag ccgaactgcg caagatggag tacaccaagt cgcagggcgg cactcgcacg
      721 gcttcgatcg acatgagcaa ggtgaatgtc gaaggactca aatcggcggg tttttcgttg
      781 gtcatgagct tcagcgacga ccagcggcgg gaacttaaat cgctgaccca cctgctgggt
      841 ctcgagagcg tgatggcggg cttctaatcg ttccgtcgca ttccaagcca tcgcgcccgg
      901 cctttgcgcc gggctttttc tttgccgcgc gttcgcgcgt gccgacgtcg cgcgtgccga
      961 cggtatcgac cgcgccgcaa agcacgctag acttcgttcg acggcaaccg aacgggagac
     1021 gggtatggac atgagcgtca gcgtgggggc ggccgccgag gcgcagcccg cgaaagccga
     1081 gccccgaaag gcgacacgcg gcgccaactc gagcgatctc gatgcttggc tggagaaggc
     1141 cgaagcgctc ggcgagctca agcgcatcac cgccgaggtc gatcccgatc tcgaagccgc
     1201 gacgatcacc tacctcgtgg gcggcgagaa atcgccggcg ctgctattcg agaacatcaa
     1261 gggccatcct gggcatcgcg cgctctacaa catggtcgga tgcaacctct cgcgcttctg
     1321 cttgatgatc ggcgagcagc ccgtggatca tccgctcaag gcggtgcaga tcctgcagca
     1381 aaagctcggc cggaaagtgc cgccgaagga ggtctcgccc gatcacgcga tctgcaacca
     1441 gaacatcgtg gaagggaacg acatcgacat ccgcatcttt ccggcgcagc gcatgtggcc
     1501 gctcgacggc ggcatgtatc tcggcaccgg ggacgcggtg gtgaccaagg atccggaaac
     1561 cggccgcatc aacgtcggca cctaccggat gatgatcaaa ggcccgcgtg aaatcggcct
     1621 ctacacttcg ccgggcaagg acgcgactct cgatcgcgag aaatggtgga agctgggcaa
     1681 gcccatgccg gtcgctgcat gctacggcat cgatccgctg ttgtttctgg tcgcagccac
     1741 cagtcttccg aagaccgaat gcgaatacga ttattatggc ggtatcaatg gcgcgccgat
     1801 cgagctgttc atcggcgacg tcaccgggct gccgatcccc gcgcgcgccg aaatcgtgct
     1861 cgagggcttc gtctatcccg acgccagctt cgccgaaggg ccgttcggcg agttcaccgg
     1921 gtactatggc cggccgggcg gcgcgacgcc ttatgtgaag atcgagaagg tacgctatcg
     1981 cagcaacccg accctcacct gtgcgctgat ggcagatggg cctgccaacg aatgcggcct
     2041 gttctgggcg gcgttgcgct ctgccggcat ctggggcgat ttgctcaagc ttggcgtgcc
     2101 agggatcaag ggcgtgtggt cgattcccga agccgcggga tggggcatca ccgtggtctc
     2161 catcaagcag atgtatgccg gccatgcgcc gcaggtgatg gcgctcgccg cgcagtgcac
     2221 ggccggcgcc tatttcggga aatacgtcat tgtcgtcgac gaggacatcg atccgagcaa
     2281 catccaccag gtgctgtggg cgatggcgac gcgttcgcgc ccggcgcagt cgatcgatat
     2341 tctgcgcgag acctggagca cctacctcga tccgagcctc aacccgccgg agatcaggcc
     2401 ttggggatcg aagtgcctga tcaacgcctg catggactac cgcttcatca agaccttctc
     2461 aaagcgcacc aaattatcca agcaggctta cgagaacgtg gtgtcgcgct ggcaggagtt
     2521 gggcttgagc ggaacgccgc cggtcgtctc cgtgttcgag gaggagacga tctctgacaa
     2581 tgtgagttag cgcgagcggc gaacacaacc gcgaggtgcg aggagtgcca tagccgggcg
     2641 tcgtggctat ataatcttgc tgtgaacgaa gccttcttcg ccgaattgtc agcgtggctg
     2701 gccgagtcta gtcttgccgg cacgtcggac accgacatcg tgtctggatt ctgcgaccgt
     2761 tgcgtcgcgg ctgggcttcc gcttgcgcgt gctctgatgt ttatcgacac gctgcatccg
     2821 gtccatgagg gccgcctgtt tcgctggggc tatgggccca ccgagtcgcc gctgctcgaa
     2881 tatggccgca ccagcccgga ggcgcttgct gcatcgggct ccggacccca gcatgtggag
     2941 caggcccagc gctggcggga cagcgcgcac tacaagatgg tgcaaaccgg cgactggttt
     3001 ctgcgccgcc gcctgaacgc cgcagccata gacgagttcc cgaccttgtc ggactttctc
     3061 gcagcgggga tgaccgacta cgtcgcgatc atcaaccgct ttgcccctca aggtgttatc
     3121 ggtgagatgg atggctttta ctcgtcatgg gcaacgcggg cgcccgacgg gttcagcgac
     3181 ggccaaatcg ccgtacttca gcgtaccgcg ccatatctcg ctgtcgccat caaatcggtg
     3241 tcgctcgcgc gcatgaccgg aacgctgatg gaaacatatc tcggtcgcga cgccggccgg
     3301 cgcgtgctcg gcggccgcat cgtgcgcgga attgccgagc ggatcgatgc agtggtttgg
     3361 ttcagcgatt tgcgcggatt cacgcgtatc accgacaccg caccggaaca ggcaatttca
     3421 ttgctaaacg actactccga tgcaatcgtg tcggcgattc acgagcatgg cggtgatgtg
     3481 ctcaagctga tcggcgacgg cacgtttgcc atcttcactg cggaagaccg agcgcacgca
     3541 tgcggggcgg cattgtccgc ggcgatcgcc gcgcgcgcac acgtcgagga attgaatagg
     3601 cgccgggcgg ccgaaggcaa accgataacc cacatgtatc tcggtttgca cgttggtgaa
     3661 gtcttctatg gcaatgtcgg aagccgcgag cggctggact ttaccgtcat tgggccggcg
     3721 gtgaacgagg caagccgcat tgcagcgatg tgccgttcgg tcgatcagcc cgttctgatg
     3781 tcgtcggcgt ttgccgatgt cggcgacatt aaacgccgcc tcgtttcggt gggacgatat
     3841 gcgctgcgcg gcgtcgcgca ccctcaggag ctatttaccc tcgaccccaa tgcgtatcct
     3901 cccgacgaag gagaattgcc tcatgcaaga cctccccgct aagaccacga gcgatctctt
     3961 cacccccatc gaagtaggag ctctcacgct gccgaatcgt attgtcatgg cgcccttgac
     4021 tcgaagccgc gcgggcgccg gcaacgtgcc cacagtgctg agcgcgctgt attacgccca
     4081 gcgggccagc gccggactca tcatctcgga agcaacccaa gtcgcgcccg agggccaggg
     4141 ctatatcagc acgccgggta tccacagcgc cgagcaggtc gcaggctgga aatgcgtgac
     4201 cagcgcggtc caggcatgtg gcggccgcat ggtggcgcag ctctggcatg tcgggcgcat
     4261 ctcccatcct tccttccagc ccg
//
LOCUS       DATCWM010000306         2517 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_207521, whole genome shotgun sequence.
ACCESSION   DATCWM010000306 DATCWM010000000
VERSION     DATCWM010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2517
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_207521"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1075)
                     /locus_tag="VIQ50_05845"
     CDS             complement(<1..1075)
                     /locus_tag="VIQ50_05845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011157181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359937.1"
                     /translation="MIESIMYIGIGFLIAGLLVIGVIPLVHARAVRLTMRRLEADNPL
                     SMAEIAAEKDQLRAEFAMTMSRLEMTVEQLKAKTTNQLTEIAKNSEAIGRIKFELSEK
                     TAALLALEAKENQLSDDLAVTRSELADKTAALEHAERALASTQSELTQVTASFNDSSV
                     AAGGQRVELVALRAQTEALKGQVESYEKETKALWDHLNGKTAELEASKQQLAEQRARA
                     DEFANRDGELDRQLDEQPAESATLVARVQELQRELAAAKRDAENAGAYERMENAVLRE
                     RIDEVAAEVARLTATLEGPDSPIETILNAARPAATAGNGPSSSVAPLAGESKGTLAER
                     IRALQARAARAAEAPRGAKRAVAQ"
     gene            complement(1255..1920)
                     /locus_tag="VIQ50_05850"
     CDS             complement(1255..1920)
                     /locus_tag="VIQ50_05850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1134 domain-containing protein"
                     /protein_id="HEY9359938.1"
                     /translation="MRAVTRSVALALILLGLASAPLLAQANPPQGNPPQASPPPPSAP
                     PVAQPQSPEYQAQQAQGPHYSSNEIVDAGHRFFGTISRGLAQIVEKAGSQFGLPNGYV
                     LGQEAGGAVVAGVRYGEGILYTKNAGDLRVFWQGPSVGFDFGGEGARTMMLVYNLPAT
                     DAIYQRFAGIDGSAYFVGGLGMTALTMNNIVVVPIRTGVGMRLGANVGYLKFTPTATW
                     NPF"
     gene            complement(2123..>2517)
                     /locus_tag="VIQ50_05855"
     CDS             complement(2123..>2517)
                     /locus_tag="VIQ50_05855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HEY9359939.1"
                     /translation="FRENAAPLREPIHTRACPPPHYSWTVAVSRSHGDPGTEAFIAAR
                     PGAVRTELGSAVKFARVAEGAVDIYPRLSPTCEWDVAAGHAVLVAAGGLVTTPEGAPL
                     SYGRVAEQFRIPAFVAWGDPSAAERLGG"
BASE COUNT          400 a          832 c          824 g          461 t
ORIGIN      
        1 gctgcgcgac cgcgcgcttg gcgccccgcg gtgcctccgc cgcacgcgct gcgcgcgcct
       61 gcaatgcgcg gatccgctcg gcgagcgtgc ctttggattc gccggcgaga ggagccacag
      121 acgaggatgg tccgtttccc gcagtcgccg ctggccgcgc ggcattgaga atcgtttcga
      181 tcggggaatc gggtccttcc aacgtggcgg tcaaccgcgc cacctccgcg gcgacctcgt
      241 cgatgcgttc gcgcagtacg gcattttcca tgcgctcgta cgcgccggca ttttccgcat
      301 cgcgcttcgc cgcggcgagc tcgcgctgca gctcctgcac gcgggcgacg agcgtcgccg
      361 attccgccgg ttgttcgtcg agttgacggt ccagctcgcc atctcgattg gcgaactcat
      421 cggcgcgagc acgctgctcg gcgagttgct gctttgaggc ttcgagttcg gcggtcttgc
      481 cgttgaggtg atcccacagc gccttggtct ctttctcgta gctttcgacc tggcccttca
      541 atgcttcggt ctgcgcgcgc agcgccacca gctcgacgcg ctgaccgccg gcggcgacgg
      601 agctgtcgtt gaagctggcg gttacctggg tcagctcgga ctgcgtgctt gcgagcgcgc
      661 gctcggcgtg ctcgagcgct gccgttttgt cggcgagttc gctccgcgta accgccaagt
      721 cgtcggagag ctgattttct ttcgcctcca gagcaagcag cgccgccgtc ttctcgctga
      781 gctcgaactt gatgcgtccg atcgcttcgc tgttcttggc gatctccgtg agctggttgg
      841 tggtcttcgc cttgagctgc tcgaccgtca tttcgagccg gctcatggtc atggcgaatt
      901 cggcgcgcag ctgatctttt tcggccgcaa tctccgccat cgacaaggga ttgtcggctt
      961 ccagccggcg catggtgagg cgcaccgcgc gcgcatgcac caacgggatc acgccgatca
     1021 cgagcaggcc cgcgatcagg aacccgatgc cgatatacat gatcgattcg atcatgacgc
     1081 ctcctgcacc accactgccc ttgattgtta gcagaatgcc gcgggtggat cacgccctat
     1141 cgccgacact gagggcggac cttcgcctgc gggagcaagg gcctatgcct tgcgctgccc
     1201 gcctcgctcg cgtcgcccgc gctgcggcgg ccggcgcatg ctcgcggcga tcaatcagaa
     1261 cggattccag gtcgctgtcg gcgtaaattt gagatatccc acattggcgc cgagccgcat
     1321 gccgacgccc gtgcggatcg gaaccacgac gatgttattc atggtcaagg ccgtcattcc
     1381 caagccgccg acgaagtagg cggaaccgtc gatgccggcg aagcgctgat aaatcgcatc
     1441 agtggccggc aggttataga ccagcatcat tgtgcgcgcg ccttcgccac cgaagtcgaa
     1501 cccgactgag ggcccttgcc aaaacacccg cagatcgccg gcattcttcg tatagaggat
     1561 gccttcgccg tagcgcaccc ctgcgacgac cgcgccgccg gcttcctgac cgagcacata
     1621 gccattgggc aggccaaatt ggcttcccgc cttctcgacg atctgcgcga gcccgcgcga
     1681 gatggtgccg aagaagcgat gaccggcgtc aacgatttcg ttcgaggaat agtgcgggcc
     1741 ttgtgcttgc tgagcttggt attccgggga ttggggctgc gcgacggggg gagcactcgg
     1801 cggcggagga ctggcttggg gaggattgcc ttgaggagga ttggcttggg ccaaaagcgg
     1861 ggcgcttgcc aagccgagca ggataagggc gagagcgacg ctccgcgtca cggcgcgcat
     1921 cgaatgctcc atgaatcgag ggtcaaatta caccgctggc ggcgacgata cctcggcttt
     1981 gcggccaaac cgcaaccgaa tcgccccatg acaggcaaca ctatggctgt atcgcggcgc
     2041 cagcggaagt ctctgctccg cgttagcgca ggcggtccga gcacgcgtgg gccgcgagac
     2101 gacggcgcgt caatatgctg gctcagccgc cgagccgctc ggctgccgag gggtcgcccc
     2161 acgcaacgaa agccgggatg cggaactgct cggccacgcg tccgtagctc agcggcgcgc
     2221 cctccggcgt ggtgaccaat ccgccggcgg ccaccaacac tgcatggccg gccgcgacgt
     2281 cccattcgca ggtcggcgac agccgcggat agatgtcgac cgcgccctcg gcgacgcgtg
     2341 cgaacttgac cgcggagccg agctcggtgc gcaccgcgcc tggtctcgcc gcaatgaagg
     2401 cttccgtccc tggatcgcca tgcgagcggc tgaccgccac cgtccaggaa taatggggcg
     2461 gcgggcaggc acgagtgtgg atcggctccc tcaggggcgc cgcgttctcg cgaaagg
//
LOCUS       DATCWM010000307         3113 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_250797, whole genome shotgun sequence.
ACCESSION   DATCWM010000307 DATCWM010000000
VERSION     DATCWM010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3113
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_250797"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            229..402
                     /locus_tag="VIQ50_05860"
     CDS             229..402
                     /locus_tag="VIQ50_05860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359940.1"
                     /translation="MSVPEEDTEEKVVRLGTETLFAIAEQLRRMYDADLRTKPSEKLE
                     RLMRRIERGEEVP"
     gene            complement(451..729)
                     /locus_tag="VIQ50_05865"
     CDS             complement(451..729)
                     /locus_tag="VIQ50_05865"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEY9359941.1"
                     /translation="MVAAHRGHVEILRALIAARAPLNHVNDFGRTALLEAVVLGNGGR
                     NHTATVEAMVEAGADVTLPDRHGMTALQHARARGYSQIARILENAGAH"
     gene            906..1166
                     /locus_tag="VIQ50_05870"
     CDS             906..1166
                     /locus_tag="VIQ50_05870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359942.1"
                     /translation="MAAQKRGDKQRRSAVGILDIGLFAFGDELLDLGGVAACGGVMQP
                     GIDAQLPFTRRCLREARAAAEVGSANHESKAKEASHDGPADG"
     gene            complement(1232..1885)
                     /locus_tag="VIQ50_05875"
     CDS             complement(1232..1885)
                     /locus_tag="VIQ50_05875"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEY9359943.1"
                     /translation="MVSVRKDAPLELLGPFACSGQTGAGAVLNSMQPRPGDSFAVFGV
                     GAVGLSALMAAKIAGCDPIIAVDVHDERLALAQALGATQVINHGGRTDVVADIRRITG
                     DGVRFSLETSAQPAVLREAVEALIAAGTCVLLGSARGGTEVSFEMPFLQFGRVVRGVI
                     QGESHPQEFIPKLIDFLMQGKMPVERMMTFYPLAQINRAAQESSLGATIKPVLRMPT"
     gene            complement(1854..2336)
                     /locus_tag="VIQ50_05880"
     CDS             complement(1854..2336)
                     /locus_tag="VIQ50_05880"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEY9359944.1"
                     /translation="MQITAAVVREKSGAFAIEQLELTDPRPDEALVRIVASGMCQTDL
                     HGRDGYYNTPYPAVYGHEGAGVVEAVGASVTKFAPGDHVVISFPLVRRLPQLSSRHAI
                     PLLEGARIENARHAPRWLDTHEQGRRGGLWCLLPTVLLRHPRHRQRTVHGKRPEGRSA
                     "
     gene            2724..>3113
                     /gene="coaD"
                     /locus_tag="VIQ50_05885"
     CDS             2724..>3113
                     /gene="coaD"
                     /locus_tag="VIQ50_05885"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HEY9359945.1"
                     /translation="MPRTALFPGSFDPVTNGHLDIVRQAARLADRLVLAIGTHPGKAP
                     LFAAEDRREMVEETCGALARASGCEFACITFADLVVATAQREGATLLIRGLRSATDFD
                     YEMEMAGMNATMAPAVQTVFVPAAPNVR"
BASE COUNT          537 a         1002 c         1030 g          544 t
ORIGIN      
        1 ccaacgcgct ggccttgccg agcaacgccc acggcgctga tttgtcctcg cggttgcgac
       61 cccttatgat cgctgaggca tgcttgcgag cagcaagttc cgcgtccaag ctggtgaggt
      121 caatcctcgc gccagagcaa gctcgcaagg ggaaccttcc gtcccgcgcc gcgttagggg
      181 ctttcggcaa acggtctggc gatgcgttcc gagggaggtc gacctaacat gtccgtgccc
      241 gaggaggaca cagaggaaaa ggttgtccgc ttggggaccg agaccctgtt tgccattgcc
      301 gaacagcttc gtcgaatgta cgacgccgat cttcgcacca agccttcgga aaagctcgag
      361 cggctgatgc gacggatcga acggggggag gaggttccgt agaccggcaa aaccaagcgt
      421 ccggcgcggg cgcgccggca atccatccca tcagtgtgcg ccggcgtttt ccaggatccg
      481 cgcgatctgc gaatagccgc gagcgcgggc atgctggagc gccgtcatgc cgtgccggtc
      541 ggggagcgtc acgtcggccc cggcctcgac catcgcctcg accgtagccg tatggttgcg
      601 gccgccattg ccgagcacca ccgcctccag caatgcagtc cgcccgaaat cgttgacgtg
      661 gttgagcggc gctcgcgccg cgatgagggc gcgtaagatc tcgacgtggc cgcgatgagc
      721 ggcgaccatc agcgcagtgt catggtgcgg gccgatgatg gcgcgcgcat cggcgccgcc
      781 cgcaagcgcg atgttaaagc atctcgaggt cgttattcat cgctgcgacg gtgacgatat
      841 cgtaaccctg ggcatcgagc gcgttcgcat tggcaccgag ccgcaagcag cgcctgcgtt
      901 gccgcatggc ggcgcagaaa cgcggcgaca agcagcggcg ttcggctgtt ggcatcctgg
      961 atattgggct tttcgccttc ggcgatgagc tgctcgatct cggcggcgtc gccgcgtgcg
     1021 gcggcgtcat gcagcccggc atagatgcgc agctcccgtt cactcggcgg tgtttgcgcg
     1081 aggctcgcgc cgccgccgag gtgggcagcg ctaaccacga gagcaaggca aaggaggctt
     1141 cgcatgacgg cccggcagat ggctaaccaa gctcgacgat tcgagaatat cacagcttta
     1201 ccagcttggc ccgccagtgc cgctgcgagc gtcaagtcgg catgcgcaga accggcttaa
     1261 tggtcgcgcc cagcgaagac tcctgcgctg cccgattgat ctgcgcgagc ggatagaacg
     1321 tcatcatccg ctcgaccggc atttttcctt gcatgaggaa atcgatgagc ttggggatga
     1381 actcctgcgg gtggctttcg ccctggatca ccccgcgtac gacgcggccg aactggagga
     1441 acggcatctc gaagctgacc tcggtgccgc cgcgagcgct gccgagaagg acgcaagtgc
     1501 cggcagcgat cagcgcctcc accgcttcac gcaagaccgc gggttgcgcg gatgtctcga
     1561 gcgaaaagcg cacgccgtcg ccggtgatcc tgcggatgtc cgcgaccacg tcggtgcggc
     1621 cgccgtgatt gatcacctgc gtggcgccca gcgcctgcgc cagggccagt cgttcgtcgt
     1681 gcacgtcgac ggcaatgatg gggtcgcatc cggcaatttt cgccgccatc agggcggaca
     1741 agccgaccgc gcccacgccg aacacggcga acgaatctcc cggccgcggc tgcatcgaat
     1801 tgagcacggc gcctgcgccg gtttggccgc tgcaggcaaa cggtccgagc agctcaagcg
     1861 gagcgtcctt ccggacgctt accatgtacc gttcgttggc gatggcgtgg gtggcgaagg
     1921 aggactgttg gaagaaggca ccatagaccg ccgcgccgtc cttgctcatg agtgtcgagc
     1981 catctgggcg cgtgccgcgc attttcaatt cgggcccctt caagcaatgg gatggcatgt
     2041 cgcgacgaca attggggcag gcgccgcacc agggggaacg aaatgacgac gtggtcgccc
     2101 ggagcgaatt tcgtgacgct ggcgccgacc gcctcgacca ctccggcgcc ttcgtggccg
     2161 taaaccgcgg gatagggcgt gttgtaataa ccgtcgcgac cgtgcaggtc ggtctggcac
     2221 atgccgctcg ccacgatgcg caccaacgcc tcgtcgggcc ggggatcagt cagttcgagt
     2281 tgctcgatgg cgaacgcgcc ggatttttcg cgcaccacgg cggcggtaat ttgcatgatg
     2341 gaattcgctg gttgggggta cgaacgccgt ggcaacgctc ggcaggaaga gcgccgggag
     2401 atcatccgca agctgccgct tacacctctg atttgccgga tggaccttcc agtcggcatc
     2461 ccttgctcgg ctgtatgata ctcgcgtttt ggcgggtact cggcggcaaa acgcgaaccc
     2521 acgccaagcc ttctggccgg cgccgcgaag ctcacagttc ttgttcggta aaggttgcaa
     2581 cggcatgaga aacaaagaaa attgctaacc ccgcgctccc gccaggccgg gccaaacggc
     2641 acccttccta tcgccgcgct cgcctccgcc gatgtgctgg gcgtgacctt gcggccctcc
     2701 ggggcgcgcg ctagaccgcc gtcatgccgc gcaccgcgct tttcccgggg tcattcgatc
     2761 ccgtcaccaa tgggcatctc gacatcgtgc gccaggccgc ccggctcgcc gatcggctcg
     2821 tgctcgcgat cgggacccat cctggcaagg cgcccttgtt cgccgccgag gaccggcgcg
     2881 agatggtcga ggagacttgc ggcgcactgg cgcgcgcgag tggttgcgag tttgcctgca
     2941 tcacattcgc cgatcttgtc gtcgccaccg cgcagcgcga gggcgccacg ctcttgatcc
     3001 gcgggctgcg cagcgcgact gatttcgact acgagatgga aatggcgggc atgaatgcga
     3061 cgatggcgcc cgccgtgcag accgtttttg tgccggcggc gccgaacgtt cgc
//
LOCUS       DATCWM010000308         2610 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_212976, whole genome shotgun sequence.
ACCESSION   DATCWM010000308 DATCWM010000000
VERSION     DATCWM010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2610)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2610)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2610
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_212976"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..439)
                     /locus_tag="VIQ50_05890"
     CDS             complement(<1..439)
                     /locus_tag="VIQ50_05890"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007559973.1"
                     /note="Catalyzes the first step in hexosamine metabolism,
                     converting fructose-6P into glucosamine-6P using glutamine
                     as a nitrogen source; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HEY9359946.1"
                     /translation="MCGIVGILGREPVAGLLVDALKRLEYRGYDSAGVATLEAGQLAR
                     RRAEGKLRNLEARLTREPLAGTIGIGHTRWATHGRPTEHNAHPHATERLAVVHNGIIE
                     NFRELREELEKTGATFGSDTDTEVVAHLVTREMRNGRAPAEAVA"
     gene            complement(550..1947)
                     /gene="glmU"
                     /locus_tag="VIQ50_05895"
     CDS             complement(550..1947)
                     /gene="glmU"
                     /locus_tag="VIQ50_05895"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003977 - UDP-N-acetylglucosamine
                     diphosphorylase activity [Evidence IEA];
                     GO_function: GO:0019134 - glucosamine-1-phosphate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0006048 - UDP-N-acetylglucosamine
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HEY9359947.1"
                     /translation="MLATQGRGGGRLANQRTCLAVVLAAGEGTRMRSARPKVLHAIAG
                     RSLLNHVLEAVRQAGGTMTAVVVGAGADAVAAEAKRILPNAEIFVQAERRGTAHAVLA
                     AKAAIARVPDDVLVIFGDTPLIRPQTLIRIREALAEGAAVVVLGFRPQDPTGYGRLMA
                     EGGELVAIREDVDASPAERAIMLCNGGLMAFAGPSALEILERIGNDNRKGEYYLTDAV
                     AIARAMGRRAIVIETEEDDVRGINTNTQLAETAAMLQARLRSAAMEGGVTLVAPETVY
                     LSSDTKFGREVVVEPFVVFGPGVTVEDDAVIRSFSHLERAHVGKGASVGPYARLRPGA
                     RLQEDVHVGNFVEIKEAVIEAGAKANHLSYIGDATVGAGANVGAGTITCNFDGIAKHR
                     TEIGKNAFIGSNSALVAPVKIGDGAYVGSGSVITYDVPAAALAVARGRQVVKEGWARR
                     LRERMSLGKKRTPAK"
     gene            2131..2511
                     /locus_tag="VIQ50_05900"
     CDS             2131..2511
                     /locus_tag="VIQ50_05900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359948.1"
                     /translation="MQLALFLPTARQVNWLLLVALLSLGEALYLRYLAIEYAPVSLAC
                     QAGLNTWLCATFRLTIVLFNHSVFGWVALGAALLNLLRPTILLVAVSLAAIPFGLVLH
                     NANLAGLAAALLMLSLARPAPAAE"
BASE COUNT          413 a          904 c          800 g          493 t
ORIGIN      
        1 ccgccacggc ttcggccggc gcgcggccgt tcctcatctc gcgcgtcacc agatgggcga
       61 ccacctcggt atcggtatcg gagccgaaag tcgcgcccgt tttctccagc tcctcgcgca
      121 gctcccggaa attctcgatg atgccgttgt ggaccacggc gaggcgctcg gtggcatgtg
      181 ggtgcgcgtt atgttcggtc ggtcggccgt gagtcgccca gcgagtgtga ccgatgccga
      241 tcgtgccggc gagcggctcg cgcgtgagcc tggcttcgag attgcgcagc ttgccctcgg
      301 cacgtcggcg cgcaagttgc ccggcttcga gcgtggcaac accggcggag tcatagccgc
      361 gatactcaag tcgcttcagc gcatcgacca gcaagcccgc gaccggctcg cggccgagaa
      421 tgcctacaat tccgcacatg cgagcgactc tctcctaagc tgacggccca ggattatacc
      481 ccggcgtgga tgtatcggcg gtcaaggcca aagtgaaatc aagctatctc tcaatttctg
      541 acgataagcc tattttgccg gtgttctttt cttgcccaac gacatgcgtt cgcgcaaccg
      601 ccgcgcccag ccttccttga cgacctggcg tccgcgcgcg accgccagcg cagccgccgg
      661 gacgtcgtac gtgatcaccg agcccgatcc cacatacgcg ccgtctccga tcttcaccgg
      721 cgccaccagc gcagagtttg agccgatgaa cgcgttcttg ccgatctcag tgcgatgctt
      781 ggcgatgccg tcgaaattgc aggtgatcgt tccggcaccg acattggcgc cggcgccgac
      841 ggttgcatcg ccgatatagc tcagatgatt agccttggcg ccggcctcga tcaccgcctc
      901 cttgatctcg acgaaatttc cgacgtgaac gtcctcttgc agccgcgcgc cgggacgcag
      961 tcgtgcatag ggtccgaccg acgcgccctt gccgacgtga gcccgttcga gatgcgagaa
     1021 ggagcggatc acggcgtcgt cctcgaccgt gaccccgggt ccgaacacca cgaagggctc
     1081 caccaccacc tcgcgaccga acttggtgtc cgaggacagg tataccgttt ccggcgcgac
     1141 cagcgtcacg ccgccctcca tcgccgcgct gcgcaggcgc gcctgcagca tggcagcggt
     1201 ctcggcgagc tgggtattgg tgttgatccc gcgcacgtcg tcctcctcgg tctcgatcac
     1261 gatcgccctg cgtcccattg cccgggcgat ggctacggcg tcggtcaagt aatattcgcc
     1321 tttgcggtta tcgttgccga tccgctcgag gatctcgagc gcgctcggac cggcgaacgc
     1381 catgaggccg ccgttgcaca gcatgatcgc gcgctcggcc gggctcgcat caacgtcctc
     1441 gcggatcgcg acaagctcgc cgccctcggc catgagccgg ccgtaacccg tggggtcctg
     1501 cggccgaaat ccaagcacca cgaccgccgc tccctcggca agcgcttcac ggatgcggat
     1561 gagtgtctgc ggccggataa gaggtgtatc gccgaagatg acgagcacgt cgtcgggcac
     1621 gcgcgcgatc gcagctttcg cggccagcac cgcgtgcgct gttccacgcc gctccgcttg
     1681 cacgaagatt tcggcattgg gcaagatacg tttggcttca gccgctactg catcggcgcc
     1741 ggccccgacc accaccgcgg tcatggtgcc gccagcctgg cgcacggcct cgagaacatg
     1801 gttgaggagc gagcggccgg cgattgcgtg cagcactttc ggccgcgccg agcgcatccg
     1861 ggtaccctcc ccggccgcga gtacgacagc cagacacgtg cgttgattcg ccaaccgacc
     1921 tcctccgcgg ccttgagtcg ccagcatggc cgccgtcata tccgagtgcg ccgcgccggg
     1981 aaaggtggaa tgcccccgcg gggcttcccc ggcaacacga ccttgtcgcg ggcttggatt
     2041 tgcttgtgcg gggcgcaact catgcccgtt tcacgggcgc cgccgggtat cgttgtccgg
     2101 caagtacacg cgcggcatac tgcatcgctc atgcaactgg cgctgtttct gcccaccgcc
     2161 cgccaagtca actggcttct gctggtcgcc ctgctctcgc tcggcgaggc gctctatctt
     2221 cgctatctgg ccatcgaata cgcgccggtg tcgctcgcct gccaagccgg cctcaacacc
     2281 tggctgtgcg ccaccttccg actgacgatc gtgctgttca accactcggt cttcggctgg
     2341 gtcgcgctcg gcgcggcatt gctcaatctt ctgcggccga cgatcctgct agttgcggtg
     2401 tcgcttgctg caatcccgtt cggtttggtg ttgcacaatg ccaatctcgc cggtcttgcg
     2461 gccgcactgc tgatgctcag cctggcgcgt cctgcgcctg cagcagagtg aaggcgagtg
     2521 cgagcaaagc agctgcgaac cacacggcct gccagttggc gaagctttca ttgccaacga
     2581 tgtaaaccgc cgaggcagtc agcgtagccg
//
LOCUS       DATCWM010000309         4802 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_223763, whole genome shotgun sequence.
ACCESSION   DATCWM010000309 DATCWM010000000
VERSION     DATCWM010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4802
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_223763"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..475)
                     /locus_tag="VIQ50_05905"
     CDS             complement(<1..475)
                     /locus_tag="VIQ50_05905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-binding protein"
                     /protein_id="HEY9359949.1"
                     /translation="MLLAGGLSLGAWRHYSQQRQVMATAQQQRDFVPTVPVPKARAAG
                     SEMSISLPGTTLAYTAANIFARANGYIETRKVDIGDHVKAGDLLAQIWAPELDHQIAQ
                     AQATLAQNQAALQQAQAGRDLAKVTDDRDSTLVQKGWLTPQQGDTDRLTLASQRAA"
     gene            complement(621..3803)
                     /locus_tag="VIQ50_05910"
     CDS             complement(621..3803)
                     /locus_tag="VIQ50_05910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY9359950.1"
                     /translation="MGIVRFALKFPYTFYVLAILIVFLGVSAIKVMPEDIFPEINIPV
                     VSVIWQYTGLSVPEMEQRVTTYSQYSMSSNVTGIKNMEAQTLNGISVQKIYFQPDVNL
                     DLAIAQIVAATNSIRALMPAGIQPPTVVQYNASSVPVLQLSLTSDRLNEQQLYDYGIY
                     NLRQQLAPVPGVTFPTPDGGKYRQIMVDIDPLKLQAKGLTPLDVVNAVNAQNLTLPSG
                     LAKIGDTQYTVRNNAMPTSIADLNDIPVKYTNGSTVFLRDVGQVHDGWAVQQNIVRND
                     GRRAVLLSVIKNGNASTVAVVNGVRKVLQVAREAAPPGLSINELFDQSKLVTASIAGV
                     VREGAIAAGLTGLMILLFLGSWRSTLIVLISIPLSILTSIVVLHFMGHTLNTMTLGGM
                     ALAVGILVDDSTVTIENTHRLRGLGFNLAAATLHGSAGIAVPTMVSTLAISCVFTSVV
                     FLEGPAKFLFTPLGLAVVFAMLASYTLSRTLTPVIIGLLLKGEHHGATPGSGNWFARF
                     HQGFERGFERFRGGYVRALTLLLKRRLIVPVVAVLMLTLGGVMLTFVGRDFFPEIDGG
                     QIKLHVRAPAATRIESTERIFQDVEDKIREVIPARDRDIIVDDIGLPQRVYNLAFTDG
                     STISVNDGVILVSLKEGHAPTADYVRRLREVLPAAFPSVTFYFQAADMTTQILNFGLP
                     AQIDVRVVGRDRTTNLHLAHELRRRIALIPGIADAHLQQELDAPSFMTNIDRSRALQL
                     GLNAQTIATDLNTSLSSSEQVFPNFWTDPTNGIPYYIAVQTPEPLVSSLNELGNTPVS
                     TAIPANGTPIPGLLSNIATFQRESVPTNLNQTNIQPVYDIYASVQGRDLGSISSDIDK
                     IVAELQKELKPGNTIQVTGQIQSMRDSFRDLGIGLLFAAVFVYLLMVLNYQNFGDPFV
                     VILALPATLCGIVTMLFITGTTLSVPSLMGAIMAVGVASANSILLVTFAREQQLNGRS
                     AFRAALDAGHTRIRPVLMTAAAMIVGMLPMAIGGPGEEQNAALARAVIGGLLFATPTT
                     LLIVPYLFAMLRKRNDGVTAYGVFEDLPDE"
     gene            4416..>4802
                     /locus_tag="VIQ50_05915"
     CDS             4416..>4802
                     /locus_tag="VIQ50_05915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013948140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEY9359951.1"
                     /translation="MEIERAAIPGTSLKVSRVALGTWAIGGWMWGGTDEAESIATIRA
                     AVEHGINVIDTAPAYGFGRSEEIVAKALVEGRLRSRVLIATKVGLEWKDGKVFRNASR
                     ARIMREIEDSLRRLRTDHIDIYQVHWP"
BASE COUNT          926 a         1463 c         1547 g          866 t
ORIGIN      
        1 ccgccgcccg ctgagatgcg agcgtgaggc gatcggtgtc gccctgctgg ggcgtcaacc
       61 atcctttctg aaccaaggtg ctatcgcgat cgtcggtgac cttcgcgaga tctcggccgg
      121 cctgcgcctg ctgcaacgcc gcctggttct gggccagcgt cgcctgagcc tgtgctatct
      181 ggtgatcgag ttcgggcgcc cagatctgcg ccagcagatc gcccgccttc acatgatcgc
      241 cgatatcgac cttgcgcgtc tcgatgtagc cgttggcccg agcgaaaata ttggccgccg
      301 tgtacgcaag ggtcgtgccc ggcagactga tggacatctc gctaccggca gcgcgcgcct
      361 tggggacggg aacggtcggg acaaagtccc gctgctgctg ggcagtcgcc atgacctgac
      421 gctgctgcga atagtgtctc cacgcgccca gcgaaaggcc gccggcgagc agcaaaaatc
      481 cgccaagcgc gaacgcccgc ccgccccatc gccgccgcgc ttctcggcga tgctttggcg
      541 tcctctcgac gccgcggccg aaagccggct tgcccaaccg attcgtcgga atcgcgtcgt
      601 ttcgatcgaa gatccgaagc tcattcatcg ggcagatcct cgaacacgcc ataggctgtg
      661 acaccatcgt tgcgcttgcg caacatggca aacagatacg ggacgatgag cagggtggtg
      721 ggggtcgcga acaggagtcc cccgatcacc gcgcgcgcca gcgccgcatt ctgctcctcg
      781 ccggggccgc cgatcgccat cggcaacatg ccgacgatca tcgcggctgc cgtcatcagc
      841 acggggcgga tgcgggtatg ccccgcgtcg agggcggcac ggaacgcgct cctcccattg
      901 agttgctgct cgcgcgcgaa cgtgaccagc aggatggagt tcgccgatgc gacgccgacc
      961 gccatgatcg cgcccatcag cgaggggacg ctgagcgtcg tgccggtgat gaacagcatc
     1021 gtgacgatgc cgcacaaggt tgccggcaac gccaggatta ctacgaaggg gtcgccgaaa
     1081 ttctgatagt tgaggaccat gagcagatag acgaatacgg ccgcaaacaa cagtccgatg
     1141 cccagatcgc ggaaggaatc gcgcatgctc tggatctggc ccgtaacctg gatcgtgttg
     1201 ccgggcttga gctccttctg gagctcggcg acgatcttat cgatgtcact cgaaatgctg
     1261 ccgagatcgc ggccttgcac gctggcatag atgtcgtaca ccggctggat attggtctga
     1321 ttcagattgg tcggaacgct ctcgcgttgg aacgtcgcga tgttgctcag cagccctggt
     1381 atcggagtgc cgttcgcggg aatcgcggtc gacaccggag tgttgccgag ttcattgagc
     1441 gagctcacca gaggctcagg tgtctggacc gcgatgtagt agggaattcc gtttgtcggg
     1501 tcggtccaga agttcgggaa gacctgctcc gaggagctga ggctggtgtt gaggtcggtg
     1561 gcgatcgttt gcgcgttgag accaagctgc agcgcccgcg accggtcgat gttcgtcatg
     1621 aaagacggcg catcgagctc ctgctgaaga tgcgcgtcgg cgatgccagg aatgagcgcg
     1681 atgcgacgcc gcagctcatg cgccaggtgc aggttggtcg tgcgatcgcg cccgacgacc
     1741 cggacgtcga tctgcgccgg caatccgaaa ttgagaatct gggtggtcat gtcggcggcc
     1801 tggaaataga aggtcacgga cggaaaggcg gccggcagca cctcgcgaag ccggcgcacg
     1861 tagtcggcgg tcggcgcgtg cccctccttg agggatacca ggatcacacc gtcgttcacg
     1921 ctgatggtcg agccgtcggt gaaagcaagg ttgtaaaccc gttgcggcag gccaatgtcg
     1981 tcgacgatga tgtcgcgatc acgcgccgga atgacctcgc ggatcttgtc ctcgacgtcc
     2041 tggaagatac gctcggtcga ttcgatgcgg gtcgccgccg gtgcgcggac gtgaagcttg
     2101 atctgtcctc cgtcgatctc agggaagaaa tcgcgcccaa cgaatgtcag catgacaccg
     2161 ccgagcgtga gcatcagcac ggcgacgacc gggacgatga gccgccgctt cagcagcagc
     2221 gtgagcgcgc gcacgtatcc tccgcgaaac cgctcgaacc cgcgctcgaa cccctggtga
     2281 aagcgcgcaa accagtttcc cgaaccaggc gttgcgccgt gatgttcacc cttgagcagc
     2341 aggccgatga tgaccggcgt cagcgtccgc gacagggtgt aggacgcgag catggcgaac
     2401 acgaccgcga gccccaacgg ggtgaacagg aattttgccg gcccttcgag aaatacgacc
     2461 gatgtgaaca cgcagctgat cgccagggtc gagaccatgg tcggcaccgc gatgccggcg
     2521 gagccgtgca gagtcgccgc cgcaagattg aagcctaggc cgcgcagccg atgggtgttc
     2581 tcgatcgtca ccgtcgaatc gtcgacgagg atgccgaccg cgagcgccat accgccgagt
     2641 gtcatggtgt tgagcgtgtg ccccatgaag tgaaggacga cgatcgatgt caggatcgac
     2701 agcgggatcg agatcaacac aatcagggtc gaccgccatg agccgagaaa caacaggatc
     2761 atcagcccgg tgaggccagc cgcgatcgcg ccttcacgca ccacgcccgc gatcgatgcc
     2821 gtgacgagct ttgattgatc gaacagctcg ttgatgctca acccgggcgg ggccgcctcg
     2881 cgggcgacct gcaggacctt gcggaccccg ttgacgaccg cgacagtcga ggcattgccg
     2941 ttcttgataa cgctcagcag gacagcgcgc cggccgtcgt tgcggacgat gttttgctgc
     3001 acggcccagc cgtcgtgcac ctggccgaca tccctaagga acacagtcga cccgttggtg
     3061 tatttgaccg ggatgtcgtt gaggtcggcg atgctcgtag gcatcgcgtt gttacgcacc
     3121 gtgtattggg tatcgccgat cttggcgaga cccgacggca acgtcagatt ttgcgcattg
     3181 accgcgttca caacgtctaa cggggtcagc cctttggcct gaagcttgag cggatcgata
     3241 tcgaccatga tctgtcgata cttgccgccg tccggggtcg gaaatgtcac gcccggcact
     3301 ggggcgagct gctggcgcag gttgtagatc ccgtagtcat agagctgctg ctcattaagc
     3361 cggtcggagg tgaggctgag ctgcaggacc ggaacgctcg aggcgttgta ctgcaccacg
     3421 gtcggcggct ggatgccggc cggcatcagg gcgcgaattg aattcgtcgc cgcgacgatc
     3481 tgcgcgatgg caaggtcgag attgacgtcg ggctgaaaat agatcttctg gaccgagatg
     3541 ccgttgagtg tctgcgcctc catgtttttg atgccggtga cgttggagct catcgagtac
     3601 tggctgtagg tggtgacgcg ctgctccatc tccggcacgc tcaagccggt gtattgccaa
     3661 atcaccgaca ccaccggaat gttgatctcc gggaagatgt cctccggcat gaccttgatg
     3721 gccgaaacgc ccaggaacac aatgaggatg gccaggacgt agaaggtgta cggaaacttc
     3781 aatgcaaatc ggacaatgcc catgatctaa cccggcgccc gctggcaccg aaggcgttgc
     3841 tcaaaggaac acccttacgg cgccaaaacc ggcaagcgtc caatgttgtc cggaatgatc
     3901 cgcatggcat cggcgcggat gagatgagag atcggattca accgatgcgt gccatctctt
     3961 tcgatcgcgt ttgcaattgg cgtgcccgga cagtttccct ttctcatcca gaagttaggc
     4021 actcgccagc gcgttacttg gtctgaattg ccgttatttg cctccctttg cggcaaagtc
     4081 tacggcgcag cgctcatcga caaaatatgg ccgccttcag tgcgccccgc ccggcatgcg
     4141 tcggccgtcg ccgccgcgag caggggtcgc gcagagcgtc ctcatcccgc ccgacgccgc
     4201 cgatgtgcgc ggcgagggag ccgcgcgcat tcgccgcatg tctgcgaacg ggcagtccgt
     4261 cgcttccggg caaaaacggt gcaggagcgg caagcgggca caagtgggac gcgcctcgac
     4321 ggcttacgtg atgcgaagcc ggggcaacct gccccgcaca cgcaaagctc gacggatagg
     4381 agtgacacat ggtccagcaa gccgatgttc tcgagatgga gatcgaacgg gccgctattc
     4441 ccggcacatc gctcaaagta tcgcgcgtcg cgctcggcac atgggcgatc ggcggctgga
     4501 tgtggggcgg aaccgacgag gccgaatcca ttgccaccat ccgcgccgca gtcgagcatg
     4561 gcatcaacgt catcgacacg gccccggcct acggcttcgg gcgctccgaa gagatcgtcg
     4621 caaaggcgct cgtcgagggc cgcctgcgtt cgcgcgtgct catcgccacc aaggtcgggc
     4681 tcgaatggaa ggacgggaaa gtattccgca atgccagccg cgcccggatc atgcgcgaga
     4741 tcgaggattc gcttcgccgg ctgcgcaccg atcacatcga catttatcag gttcattggc
     4801 cc
//
LOCUS       DATCWM010000310         2078 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_385834, whole genome shotgun sequence.
ACCESSION   DATCWM010000310 DATCWM010000000
VERSION     DATCWM010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2078
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_385834"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..732
                     /locus_tag="VIQ50_05920"
     CDS             <1..732
                     /locus_tag="VIQ50_05920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative zinc-binding metallopeptidase"
                     /protein_id="HEY9359952.1"
                     /translation="PADAAADQAQVMTGHASGLITLNVAEADAPERERQRKSMGEPYR
                     TLLGHFRHEIAHYYWDRLIKDSPAIDEFRRLFGDEREDYAAALQRHYANGPPVDWTDH
                     FVTAYASAHPWEDFAETWAHYFHLVDTLETAFAFGLRLRPKVAKGAGLAAAIDFDPYA
                     AEMDRIIDAWLPLTFAVNSINRSMGLPDLYPFVLPPAVIWKLTFIHDQIHAVSADQPR
                     DSEHNAIRAIVAGLKRAVGSPQSTT"
     gene            839..>2078
                     /locus_tag="VIQ50_05925"
     CDS             839..>2078
                     /locus_tag="VIQ50_05925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HEY9359953.1"
                     /translation="MSILASLHHLTRYRYDRPVALAPQVIRLRLAPHCRTRIESYSLK
                     VTPAQHFVNWQQDPNGNWLARFVFPEKTREFTITVDLIADMAVINPFDFFVEPFAETF
                     PLAYPAEFAEELAPYLDAEPAGPRFAAFLASIPRERQTTVDVLVGLNQRLQREIRYLT
                     RMESGVQTPEQTLAASAGSCRDSAWLQVQILRHLGLAARFVSGYLIQLRPDARPLEGP
                     VGAAQDFADLHAWAEAYVPGAGWIGLDATSGLLCAEGHLPLAATPHFRAAAPISGSVE
                     PSQATFSFEMTVARIAEKPRVSHPFSEAAWAALDALGEKVDAELARNDVRLTVGGEPT
                     FIAIDDYQSAEWNTAALGPTKRTRADELIRRLRQRFAPGGLLHHGLGKWYPGEALPRW
                     AFCLHWRRDGKPIWHDAARIA"
BASE COUNT          348 a          711 c          647 g          372 t
ORIGIN      
        1 ccggcggacg ccgcggcgga ccaagcgcag gtgatgaccg ggcatgccag cggcctcatc
       61 acgctcaacg tggcggaggc cgacgccccg gaacgcgaac gtcagcgcaa gtcgatgggg
      121 gaaccctacc gcacgctgct aggccatttc cgccacgaga tcgcgcatta ctactgggat
      181 cgtctgatca aggattcgcc agctatcgac gaattccggc gacttttcgg cgacgagcgc
      241 gaggactacg ccgcggcgct gcagcggcac tacgccaatg gcccgccggt ggactggacg
      301 gaccatttcg tcaccgccta tgccagcgcg cacccgtggg aggatttcgc cgaaacctgg
      361 gcccactatt tccacctcgt cgacacgctc gaaaccgctt tcgcgttcgg gctgcggctg
      421 cggcccaagg tggccaaagg cgcaggcctt gccgcggcga ttgatttcga tccctatgcc
      481 gctgagatgg accggatcat cgatgcctgg ctgccgctga cctttgccgt caattccatc
      541 aaccgcagca tggggctgcc ggatctgtat cccttcgtcc tgcccccggc cgtgatctgg
      601 aagctgacct tcatccatga tcagattcac gcggtgagcg ccgatcagcc gcgcgattcc
      661 gagcacaatg caatccgcgc catcgtggcg ggcctcaaac gggcggtggg ctcgccgcag
      721 tcgacgactt gatcgaaatg ccggctggcg ctcgctttct cctcgagtcc gtcaggcgcg
      781 aaaattgcat cgaaaaattg cgtaagatgg aagcggtctt gcggtagccg agcagcgtat
      841 gtcgatcctc gccagtctcc atcatctcac gcgctatcgc tacgaccggc cggttgctct
      901 cgccccgcag gtcatccggc tgcgcctggc cccccattgc cgcacacgca tcgaaagcta
      961 ttcgctcaag gtgacgccgg cgcaacattt cgtgaattgg cagcaggacc cgaacggaaa
     1021 ctggctcgca cgcttcgtgt ttccggagaa gacgcgcgaa ttcaccatca ccgtcgatct
     1081 catcgccgac atggcggtga tcaatccgtt cgatttcttc gtcgagccgt tcgcggaaac
     1141 cttcccgttg gcctatcccg ccgagttcgc cgaggagctt gcgccctacc tcgatgccga
     1201 gccggccggt ccgcggtttg cggcgttcct cgcctccatc ccgcgcgagc ggcagactac
     1261 ggtggacgtc ctggtcggcc tcaatcaacg tctgcagcgg gaaatccgct acctcacgcg
     1321 catggagtcg ggcgtgcaaa cgcccgagca aacactcgcg gcaagcgcgg gctcgtgccg
     1381 cgacagcgca tggctgcagg tgcaaattct gcgacatttg ggtctcgcag cccgcttcgt
     1441 ctccggctat ctcattcagt tgcggccgga tgcgcgcccg ctcgagggcc cggtgggcgc
     1501 ggcgcaggac tttgctgacc tgcacgcctg ggccgaggcc tacgtgcccg gcgccggatg
     1561 gatcggactc gacgcaacct ccggacttct ctgcgcggaa ggtcatctcc cgctcgccgc
     1621 gacgccgcat ttccgtgccg cggctcccat cagcggctcc gtcgagcctt cgcaagccac
     1681 cttctcgttc gagatgacgg tggcgcgtat cgcggaaaag ccgcgcgtga gccatccctt
     1741 ctccgaggcg gcatgggcgg cgctcgatgc actgggtgaa aaggtcgacg ccgagcttgc
     1801 gcgcaacgac gtgcgcctca cggtgggcgg tgagccgact ttcattgcga tcgacgacta
     1861 ccagtcggcg gagtggaaca ccgccgccct cggaccgacc aagcgcacgc gcgccgacga
     1921 gctgattcgc cgcttgcggc aacgcttcgc gccgggagga ctgctgcacc acggcctggg
     1981 caaatggtat cccggcgagg ccctgccgcg gtgggccttc tgcctgcatt ggcggcgcga
     2041 cggcaagccg atttggcatg acgcggcgcg cattgcgt
//
LOCUS       DATCWM010000311         2355 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_509944, whole genome shotgun sequence.
ACCESSION   DATCWM010000311 DATCWM010000000
VERSION     DATCWM010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2355)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2355)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2355
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_509944"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..745
                     /locus_tag="VIQ50_05930"
     CDS             <1..745
                     /locus_tag="VIQ50_05930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEY9359954.1"
                     /translation="YNKIEDARAEGKPLAEAAATLKLEARTVEVDRSGRDPAGTPVKL
                     PDAQRLLAAAFTTDIGVERDPLQFEDGYIWYDVAGISPSRERSLDEVKDQVEARWREQ
                     EIAARLDAKATSILDKLKAGTTLSDVAAAEHLKVETLSGLKRGQASGPLSAAGVDTVF
                     RTAKDADGKAEGAQPPAEVVFRVTDIVVPPLDMASEDAKRMVETLNRGLSDAILAQYI
                     ARLESDIGVTINQSALNQVVSGGAGDGEN"
     gene            757..2274
                     /gene="trpE"
                     /locus_tag="VIQ50_05935"
     CDS             757..2274
                     /gene="trpE"
                     /locus_tag="VIQ50_05935"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018391173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HEY9359955.1"
                     /translation="MQIEPPAPAFAKRYARGEAQVVWTTLVSDLETPVSAFLKIATAR
                     PLSFLLESVEGGAVRGRYSIIGLNPDLVWRTVAGRAEINRNARQNADTFTPCAGPPLA
                     ALRSLIAESRIDLPDVLPPMAAGIFGYLGYDMVRMMEDLPPPNPDPIGIPEAVLVRPT
                     VVVVFDAVKDVIAVVTPVRPQSGVSADAAFARASERLSAIVDALDAPLAHSPPDVQAG
                     PLTVWPSSNVTPAEYERMVSVAKEYIAAGDIFQVVLSQRFEAPFELPPFALYRALRRV
                     NPAPFLYFLDFGEFSIAGSSPEILVRVREGTVTIRPLAGTRPRGATPQQDKALETELL
                     ADEKERAEHLMLLDLGRNDVGRVARPATVRVTDQFFIERFSQVMHIVSNVEGQLDGKY
                     DALDALAAGFPAGTVSGAPKVRAMEIINELEPDKRGLYAGSVGYFSAAGELDSCIVLR
                     TALIKDGMMYVQAGAGIVADSNPKSEQQECVDKAKALFRAAEEAKRFASAARRGQ"
BASE COUNT          433 a          780 c          749 g          393 t
ORIGIN      
        1 ctacaacaag atcgaggacg cacgcgcaga gggcaaaccg ctggccgaag ccgccgccac
       61 cctcaagctg gaagcacgca cggtcgaggt cgatcgctcc ggccgcgacc cggccggcac
      121 gccggtgaag ctacccgacg cgcagcgtct tctcgccgcg gctttcacca cagacatcgg
      181 ggtcgagcgc gatccgttgc agttcgagga cgggtacatc tggtacgacg tcgccgggat
      241 ctccccttcg cgcgagcgct cgctcgacga agtcaaggat caagttgaag cgcgctggcg
      301 cgagcaggag atcgccgccc ggctcgacgc aaaggcaacg agcatcctcg acaagctcaa
      361 agccggcacg acgctttccg atgtcgcagc agccgagcat ctcaaggtcg aaaccctgag
      421 cggcctcaag cgcggccaag cctcgggccc gctctcggct gcgggagtcg atactgtctt
      481 tcgcacggca aaggatgccg acggcaaagc cgaaggtgcg cagccgccgg ccgaggtggt
      541 gttccgcgtc accgacatcg tcgtgccgcc gctcgacatg gcttcagaag acgccaaacg
      601 catggtcgag acgctcaatc gcggcctctc cgacgctatt cttgcccaat atattgcgcg
      661 gctcgaaagc gatatcggcg tgaccatcaa tcaaagcgcg ctgaaccaag tggtcagcgg
      721 cggagcgggc gacggcgaaa actgagcttg gctcatatgc agatcgagcc accagccccg
      781 gcttttgcca aacgctatgc gcgcggcgag gcacaagtcg tgtggactac gctggtttcg
      841 gaccttgaaa ctccggtatc ggcgtttctc aagatcgcga ctgcgcggcc gctgagcttt
      901 ctactggagt ccgtcgaggg cggcgcggtg cgcgggcgct attcgatcat cgggcttaat
      961 cccgacctcg tttggcgcac cgtggccggg cgagccgaaa tcaatcgcaa cgcgcggcaa
     1021 aacgcggaca cctttacgcc ctgcgcgggt ccgccgctgg cggcgttgcg ctcactcatc
     1081 gccgaaagcc gcatcgatct gccggacgtg cttcccccca tggcagccgg gattttcggt
     1141 tatctcggct acgacatggt gcggatgatg gaggatctgc ctccgcctaa ccccgacccc
     1201 atcggcattc ccgaagcggt tctggtgcgt cccacggtcg tggtggtgtt cgatgcggtc
     1261 aaagacgtga tcgccgtggt caccccggtg cgaccgcaaa gcggggtgag cgccgatgcc
     1321 gccttcgcgc gggcaagcga gcgcctctcg gcgatcgtcg atgcactcga tgcgccactg
     1381 gcgcactccc cgcccgacgt tcaggccggc ccgctcacgg tgtggccgtc ctccaatgtc
     1441 accccggccg agtatgagcg catggtcagc gttgccaagg aatacatcgc cgccggcgac
     1501 atttttcagg tcgtgttgtc gcaacggttc gaagcgccgt tcgaattgcc tccgtttgcg
     1561 ctctatcggg cactgcgtcg ggtcaacccg gcgccgtttc tctatttcct cgacttcggc
     1621 gagttttcga tcgccggttc gagtccggag atcttggtgc gagtgcgcga aggcacggtg
     1681 accattcggc cgctcgcggg cacccggccg cgaggcgcta ccccgcagca ggacaaagcg
     1741 ctcgagaccg agctgttggc ggacgagaaa gaacgcgccg aacacctgat gcttctcgac
     1801 ctcggccgca acgatgtcgg acgcgtcgcg cggcccgcca cggtcagggt gaccgatcag
     1861 ttcttcatcg agcgcttcag ccaggtgatg cacatcgtct ccaatgtcga gggccagctc
     1921 gacggaaaat acgacgccct tgatgccctg gcggcaggct tccccgccgg caccgtctca
     1981 ggcgcgccca aggtgcgggc catggagatc atcaacgagc tcgagccgga caagcgcggg
     2041 ctctatgccg gctcggtcgg ctacttctcc gccgcaggcg agctcgacag ctgcatcgtg
     2101 ctgcgcacgg ccctgatcaa agacgggatg atgtatgtgc aggccggtgc cggcatcgtc
     2161 gccgattcca acccgaagtc cgaacagcag gaatgcgtag acaaagcgaa agcgctgttc
     2221 cgcgccgcgg aggaggcaaa gcggtttgcg agcgcggccc ggcggggaca atagcttcaa
     2281 ccgcggcgcg gtgcgcggca tccgccgcgc cgcaaggtcc gcagtggaca atcgccaaga
     2341 tgacactaca tcaac
//
LOCUS       DATCWM010000312         2383 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_385839, whole genome shotgun sequence.
ACCESSION   DATCWM010000312 DATCWM010000000
VERSION     DATCWM010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2383
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_385839"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1525
                     /locus_tag="VIQ50_05940"
     CDS             <1..1525
                     /locus_tag="VIQ50_05940"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HEY9359956.1"
                     /translation="LRKLDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTG
                     RPATRHDNITTGRIYQDILTKERRGDYLGATIQVVPHVTNAIKDFIREGNEGFDFVLC
                     EIGGTVGDIEGLPFFEAIRQLGNELPRHHAIYIHLTLLPFVAGAGELKTKPTQHSVKE
                     LRSIGIQPDILLCRTDRPIPDSERAKLALFCNVRPSAVIEARDADSIYAVPEAYHQAG
                     LDREVLAAFGIEPDGEPDLARWRLINERIRNPEGDVTIAIVGKYTGLKDAYKSLIEAL
                     SHGGIANKVRVNLDWIESEVFEREDPAPFLENVNGILVPGGFGQRGTEGKIRAVQFAR
                     ERQLPYFGICFGMQMAVIEAARNLCGIEEANSTEFGATPEPVVGLMTEWMKGNELQTR
                     GVQGDLGGTMRLGAYPAVLQRGSRVSQIYHGATEISERHRHRYEVNTRYKGRLEQHGM
                     RFSGMSPDGLLPEMIEYEDHPWFVGVQFHPELKSRPFEPHPLFASFVGAAVDQSRLV"
     gene            1665..1994
                     /locus_tag="VIQ50_05945"
     CDS             1665..1994
                     /locus_tag="VIQ50_05945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NIPSNAP family protein"
                     /protein_id="HEY9359957.1"
                     /translation="MIYELRIYHCVTGRLPALLKRFETTTLELWKRHGIRQAGFWTVL
                     VGDGGNQDLHYLLAWESLAERETKWNKFATDPEWLAKRAESERDGPIVASIKNMFLQP
                     TAFSAVK"
     gene            2000..>2383
                     /locus_tag="VIQ50_05950"
     CDS             2000..>2383
                     /locus_tag="VIQ50_05950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY9359958.1"
                     /translation="MPRGLDHVVHAVRDLEAAAELYRRLGFTVGARNQHSWGTHNHLV
                     QLPGFFVELLTVAEPQKLGSDGLSALFGTFNRVFLKHQQGLSLLILESEDAAADAARF
                     RSAAIGVSDAMHFEREGKRPDGAPTK"
BASE COUNT          445 a          781 c          724 g          433 t
ORIGIN      
        1 gctgcgcaag ctcgacccct atctgaacgt cgaccccggg accatgtcgc cctaccagca
       61 cggcgaggtc ttcgtcaccg atgacggcgc tgagaccgac ctcgacctcg gccattacga
      121 gcgcttcacc ggccggccgg cgacccgcca cgacaacatc accaccgggc gcatctacca
      181 ggacatcctc accaaggagc ggcgcggcga ctatctcggc gccaccattc aggtggttcc
      241 ccacgtcacc aacgcgatca aggatttcat ccgggaaggc aacgagggct tcgatttcgt
      301 cctgtgcgag atcgggggca cggtcggtga tatcgagggc ctgccgttct tcgaggcgat
      361 ccgacagctc ggcaacgagt tgccccggca tcatgccatc tacatccacc tgacgctctt
      421 gccgttcgtt gccggcgcgg gcgaactcaa gaccaagccg acccagcact cggtcaagga
      481 actgcgctcg atcggcattc aacccgacat cttgctgtgc cgtaccgacc ggccgatccc
      541 cgacagcgag cgcgccaagc tcgccttgtt ctgcaacgta cgtccgagcg cggtgatcga
      601 agcgcgcgac gcggacagta tctatgcggt gccggaggcc taccatcagg ccgggctcga
      661 ccgcgaggtg ctcgcggcct tcgggatcga acccgacggc gaacctgatc tcgcgcgttg
      721 gcgtctcatc aacgagcgca ttcgcaaccc ggaaggcgat gtgacgattg ccatcgtcgg
      781 caaatatacc ggcctcaaag acgcctataa gtcgctgatc gaggcgctct cccacggcgg
      841 catcgccaac aaggtccgcg tcaatctcga ttggatcgaa tccgaggtgt tcgagcgcga
      901 ggatccggcg ccgtttctcg agaacgtgaa cggcattttg gtacctggcg gcttcggcca
      961 gcgcggcacc gaagggaaaa tccgggccgt tcagttcgcg cgtgagcgcc aactgccgta
     1021 tttcgggatt tgctttggaa tgcagatggc cgtcatcgaa gccgcgcgca acctctgtgg
     1081 catcgaggag gcgaactcga ccgaattcgg tgcgaccccc gaaccggtcg tcggtttgat
     1141 gaccgagtgg atgaagggca acgagctcca gactcgcggt gtccagggcg atctcggcgg
     1201 caccatgcgc ctcggtgcct atccggcggt ccttcagcgc ggcagccggg tatcgcagat
     1261 ctaccacggc gcgaccgaga tttccgagcg ccaccgccac cgctacgagg tcaataccag
     1321 gtacaagggc cggctcgagc agcatggcat gcgcttttcc ggtatgtcgc ccgacggact
     1381 attgccggag atgatcgagt acgaagacca tccctggttc gtcggcgtgc agttccaccc
     1441 cgaactgaaa tcgcggcctt tcgagccgca cccgctgttc gcctctttcg tcggcgcggc
     1501 ggtggaccag agccgactgg tctaaccagt tgtcttcacc ttgccgattt gcgcgagctg
     1561 ccaggcgggc cgattgacgt ttttcgttcg caatcatcgc cgattgcctt tcccgccgct
     1621 gccattaacg tcggcggcct tgagtgcagc agcaagaggc gatcatgatc tatgaattga
     1681 ggatttatca ctgcgtgacc gggcggctac ccgctctgtt gaagcggttc gaaaccacga
     1741 cgctcgagct gtggaagcgg cacggcatcc gccaggccgg gttctggacg gtgctggtgg
     1801 gagacggcgg aaaccaggac ctccattacc tgctcgcctg ggaatccctc gccgagcgtg
     1861 aaacaaagtg gaataaattc gccaccgatc cggaatggct agccaagcgt gccgaaagcg
     1921 agcgcgacgg accgatcgtc gcctcgatca agaacatgtt cctgcagccc acggcgttct
     1981 cggcggtgaa gtgacggcga tgccccgcgg cctcgaccat gtcgtccacg ccgtgcgcga
     2041 tctcgaggct gcggccgagc tctatcgtcg cctcggtttc actgtgggcg cgcgcaacca
     2101 gcattcgtgg ggcactcaca atcacctggt ccaacttccg ggcttcttcg tcgaactgct
     2161 gaccgtggcc gagccgcaaa agcttgggag cgatggcctc tcggcgctgt tcggcacctt
     2221 caaccgagtc tttctcaagc accagcaggg actctcgctg ctcattctcg aaagcgaaga
     2281 cgccgcagcg gacgcggcac gttttcgctc ggcggcgatc ggggtctccg atgccatgca
     2341 tttcgagcgc gagggcaagc ggcccgacgg cgccccaacc aag
//
LOCUS       DATCWM010000313         4175 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_299256, whole genome shotgun sequence.
ACCESSION   DATCWM010000313 DATCWM010000000
VERSION     DATCWM010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4175
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_299256"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1318)
                     /locus_tag="VIQ50_05955"
     CDS             complement(<1..1318)
                     /locus_tag="VIQ50_05955"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016842650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEY9359959.1"
                     /translation="MTSFHDFGLAEPITRALAEEKYTTPTPIQAQTIPVALARRDVIG
                     IAQTGTGKTAAFALPILHHLFTNRRCPGHKACRVLVLSPTRELSGQILDSFRAYGRHV
                     RASGALVIGGVSMGAQVRAVQNGVEVLVATPGRLLDLVKSNALRLGEVEFLVLDEADR
                     MLDMGFIHDIRKIVAKLPAQRQTLLFSATMPREIAALAAQMLRDPAKVAVTPAASTVE
                     RVEQRIIHVDRAAKPAVLAEILRDEPIDRTLVFTRTKHGADKVVRGLAKAGISAHAIH
                     GNKSQNQRERVLAAFRKGQVLTLVATDIAARGIDVDGISHVVNFDLPNVPETYVHRIG
                     RTARAGAAGVAISLCDAEEAAYLRDIEKLIRMSIPATDQRRFPRQARPTTLQGRTARP
                     SSHAPDKRQQRGRTNAPRKQDRQEQLRKAPNAIAAVAFLHRSVRSGH"
     gene            complement(1624..1836)
                     /locus_tag="VIQ50_05960"
     CDS             complement(1624..1836)
                     /locus_tag="VIQ50_05960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003605770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359960.1"
                     /translation="MDTDVKRARDRAEAAFKKKEQQLREGQQARAEYETARAATREKT
                     ARLRALRLARDAGLKTPVPAAQKQPA"
     gene            2088..3458
                     /locus_tag="VIQ50_05965"
     CDS             2088..3458
                     /locus_tag="VIQ50_05965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018183407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEY9359961.1"
                     /translation="MASVLDLIGDTPLVEVTRIDRGPCRLFLKLESANPSGSLKDRPA
                     RTMIEAAEADRRLKPGGTIVEATAGNTGLGLALVGGRKGYRTLLVVPDKMAREKVLHA
                     KAMGAEVVTTRSDVGKGHPDYYQDLAEAIARRTPGAFFVNQFANPANPQAHATTTGPE
                     ILRQMDGDVDAIVVGVGSGGTLTGIGRFMRGASPKTAIVLADPEGSVLAPYVETGRML
                     QAGNWAVEGIGEDFVPPNADLALVSQAFAIPDAESFASARELLRAEGVLAGSSSGTLL
                     AAALRYCRAQAAPKRVVSLVCDSGAKYLSKVFNPIFLAQEGWSHPDRHGAVRDVVVSR
                     YSEGNAVVVRPQDNLRTVFSRMRSSDVSQLPVIDEGGHVVGLVDESDVLAALLTERDD
                     PNKAFARPVKGVMARRLETISADAPIADLLPLFRKDYVAIVMDGDQFLGVATRLDLIN
                     YFRIAI"
     gene            3644..>4175
                     /locus_tag="VIQ50_05970"
     CDS             3644..>4175
                     /locus_tag="VIQ50_05970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009489354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEY9359962.1"
                     /translation="MTTKSNQLDFSTRCIHAGQEPDPTTGAVMMPIYTTSTYVQQSPG
                     VNKGYDYARTKNPTRMAFERCIADLEGGSAAFAFASGLAAISTTLECLDHGSHIVAVD
                     DLYGGTRRLFERVRKRSMGLQVSYHDLTDAGALEAAIRQDTRLVWIETPTNPLLKLVD
                     LERVAAITKRRGIWAVA"
BASE COUNT          700 a         1357 c         1329 g          789 t
ORIGIN      
        1 tgtggcctga cctgacgctg cgatgcagga acgcgacggc ggcaatcgcg tttggagcct
       61 tccgcagctg ctcctgtcga tcttgcttgc gcggcgcgtt ggtgcggccc cgctgttgcc
      121 gcttgtcggg tgcatgtgag gacggccgcg ctgtgcggcc ctggagcgtg gttggccggg
      181 cctggcgcgg aaacctgcgc tggtccgtcg ctgggatgga catgcggatc agcttctcga
      241 tgtcgcgaag gtacgccgcc tcttcggcgt cgcagagcga gatcgccaca cctgccgccc
      301 cggcccgcgc ggtgcggccg atgcgatgta cgtaggtttc cggcacattc ggcagatcga
      361 aattcacgac gtggctgatg ccgtcgacgt cgatcccgcg tgcggcaatg tcggtggcga
      421 cgagcgtgag cacctgcccc ttgcgaaacg cggcgagcac gcgttcgcgc tggttctgcg
      481 acttgttgcc gtggatcgcg tgggccgata tgccggcctt ggccaggcca cgcaccacct
      541 tgtctgcgcc atgcttggtc cgggtgaata ccagagtgcg gtcaatcggc tcgtcgcgca
      601 aaatctcagc gagcaccgcc ggcttcgcag cgcgatcgac atggatgata cgctgctcga
      661 cgcgctcgac cgtcgaggcc gccggcgtca cggcaacctt ggccggatcg cgcaacatct
      721 gagccgcgag cgcggcgatt tcacgcggca tcgttgcgga aaacaacagc gtttgccgct
      781 gcgcaggaag cttcgcgacg attttccgga tgtcgtgaat aaagcccata tcgagcattc
      841 ggtcggcttc atcgagcacg agaaattcca cctcgccaag acgcagcgcg ttgctcttca
      901 cgaggtcgag caggcggccg ggcgtggcga cgagcacctc gacgccgttt tgcaccgcgc
      961 gcacctgcgc gcccatcgac acgccgccga tcaccagcgc gccgctggcg cggacatggc
     1021 ggccataagc gcggaagcta tcgagtattt gcccggacag ttcgcgtgtc gggctcagca
     1081 cgagcacacg gcaggctttg tgccccgggc accgcctatt ggtgaagaga tgatgcagga
     1141 tcggcagcgc gaacgccgcg gtcttgccgg tgccggtttg cgcaatcccg ataacgtcgc
     1201 ggcgcgctag agcgacggga atggtctgcg cttggatcgg cgtgggcgtg gtgtatttct
     1261 cttcagcgag cgcgcgtgtg atcggttcgg cgaggccgaa atcatgaaaa gaggtcaatg
     1321 aacaagcttt ctattgtgcg agatggcacg gctgcgggag tgccgcagtc gcagttccac
     1381 atcgcgggtg gtgcagacac ccccgcgtga tttgggttgt cggtgaaagt gaaggggcaa
     1441 gccagaaacc gtttgacggg gatccgtaca cgcggctcgc caggaccaca tgaggtcgct
     1501 cgccccatat ggcccacgga tgtgttggtt tcaaggcgct cggcggctgc taacaggcgg
     1561 aagaataggc tgcctcatcg ggcttgcgcc gggcgagcca attgttactc agattcgatt
     1621 cgatcaagcc ggctgttttt gggccgccgg aacaggcgtt ttcaagcctg cgtcgcgtgc
     1681 cagcctcagc gcccgcaatc gggcggtctt ttcacgcgtg gccgcacgcg ctgtctcgta
     1741 ttcggccctt gcttgctgcc cctctcgcag ttgctgttcc tttttcttga aagccgcttc
     1801 ggcgcggtca cgcgcccgtt taacgtcggt gtccaatctc gttactcctt ttcgagcgaa
     1861 cccgttcgca ggacagactt tcctgcctga ggaccggata acgcttgtcg atgtgggaag
     1921 ctcaaccgag caacgccgtc ccaagttatt tgttccgcgc gcaccccgag cggggccgat
     1981 ttcgacacta ggataaagcg cgggcggcga tagagtccgt cgccgctgcc cccggtttcc
     2041 cgcctgcgac cggtgccctc gtgtgccgcg caatgctata gaccaccatg gcatcggtcc
     2101 tcgatctcat cggcgacacg cctctcgtcg aggtgacgcg catcgaccgt ggcccctgtc
     2161 ggctctttct caagctcgaa agcgccaacc cttccggctc gctcaaggac cgtcccgcgc
     2221 gcaccatgat cgaggcggcg gaagcggaca gacgtctcaa gcccggcggc accatcgtcg
     2281 aagccacagc cggtaatacc gggcttggcc tcgcgctggt gggcggccgc aaggggtacc
     2341 gcacgctgct cgtcgttccc gacaaaatgg cgcgcgagaa ggtgctgcac gccaaagcga
     2401 tgggtgccga ggtcgtcacc acgcgctcgg acgtgggcaa gggacacccc gattactacc
     2461 aggatctcgc ggaggcgatt gcgcggcgca cgcccggggc cttcttcgtc aaccagttcg
     2521 ccaacccggc caatccgcag gcgcatgcga cgacgaccgg cccggaaatc ctgcgccaaa
     2581 tggatggcga cgtcgatgct atcgtcgtcg gcgtcggctc cggcggcacg ctgacgggca
     2641 tcggtcgctt catgcgcggc gcctcgccca agaccgcgat cgtcctcgcc gatccggagg
     2701 ggtccgtgct cgcgccctac gtcgagaccg gccgcatgct gcaggccggg aactgggcgg
     2761 tcgaagggat cggcgaagat ttcgtgccgc ccaacgccga tctcgcgctc gtctcgcagg
     2821 ccttcgccat tcctgacgcc gaaagctttg ccagcgcgcg tgagctcttg cgcgccgaag
     2881 gcgttctcgc cggctcctcc tcgggtacgc tgctggcggc ggcgctgcgc tattgccgcg
     2941 cacaggcggc gccgaagcgg gtggtgagcc tcgtttgcga ttccggcgcg aaatatctgt
     3001 caaaagtgtt caatcccatc ttcctcgcgc aggaaggctg gagccatccc gaccggcacg
     3061 gcgctgtgcg cgacgtcgtc gtaagccgct acagcgaagg caatgcggtc gtggtgcggc
     3121 cgcaggataa tctgcgcacg gtattctccc gcatgcgctc cagcgatgtt tcgcagcttc
     3181 cggtcatcga cgagggcggc catgtggtcg gcctcgtgga cgagagcgac gtcctcgccg
     3241 cgctgctcac cgagcgcgac gatccgaaca aggcctttgc ccggccggtc aaaggggtga
     3301 tggcgcggcg gctggagacg atttccgccg atgcgccgat cgccgatctc ctgcctctgt
     3361 tccgcaagga ctatgtcgcc atcgtcatgg acggcgacca gtttctgggc gtggcgaccc
     3421 gtctcgacct aatcaactat tttcgcattg cgatttaact ccatagggtg ggcattgcgg
     3481 caaatcgttc tttcttccag tcaccacctc gcgggcgcaa tgcccacgcg ttttgttcac
     3541 gtgggcaaaa tcgctcctgc ttcaagtttg ccgcatatca gcaagcgatt ttgcccaccc
     3601 tacgcgctac gcaccgacct ctcggatgat aaagactaag accatgacga ccaaatcaaa
     3661 ccaactcgat ttctccacgc gctgtattca tgcggggcag gagcccgatc ccaccaccgg
     3721 cgccgtcatg atgccgatct acaccacctc cacgtacgtg cagcagagcc ccggcgtgaa
     3781 taagggttac gactatgccc gcaccaagaa cccgacgcgc atggcgttcg agcgctgcat
     3841 cgccgatctc gaaggaggca gcgccgcgtt cgcctttgcc tccggccttg cggcgatctc
     3901 gaccacgctc gagtgcctcg accatggctc gcatatagtt gctgtcgacg acctctacgg
     3961 cggcacgcgg cgcttgttcg agcgggtgcg caagcgctcg atgggattgc aagtgagcta
     4021 tcacgatctc accgacgccg gcgcgctcga ggcggcgatc cgccaggata ctcgcctcgt
     4081 ctggatcgag acgccgacca acccgttgct caagctcgtt gatctcgagc gcgtggcggc
     4141 gatcacgaaa cggcgtggca tctgggcggt cgccg
//
LOCUS       DATCWM010000314         2396 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_207592, whole genome shotgun sequence.
ACCESSION   DATCWM010000314 DATCWM010000000
VERSION     DATCWM010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2396)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2396)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2396
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_207592"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1845)
                     /gene="lon"
                     /locus_tag="VIQ50_05975"
     CDS             complement(<1..1845)
                     /gene="lon"
                     /locus_tag="VIQ50_05975"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HEY9359963.1"
                     /translation="MAEQAQSRPLDQGEGHPPFPPDSMILLPVRQLVLFPGIVLPLTI
                     GHKSSIAAAQSAVRNQRPLGVLLQIDPAVEEPTLDQLHRVGTAAQILRYVTAPDGTHH
                     AVVQGVRRFRVIEQLPGFPFLVARVEEIGLAEVMTPDIEARIGLVRTRAREAIQLLAN
                     VPPEVAATIENLDSASALADFIASILDAKPSEKQDVLETVDIRERLDKVLALLAQRIE
                     VLKLSKQIGEQTQQSLSSQQREHILREQLRHIQKELGEGDEKSVEIAELRETVEKAGM
                     PKEAKDQATKELKRLERMPEAAAEYGMIRAYLDWLIDLPWSKLDTDNIDVAEARRILD
                     EDHYGLPKIKRRILEYLAVRKLKPDGRSPILCFVGPPGVGKTSLGQSIARATGRKFVR
                     LSLGGVHDEAEIRGHRRTYIGALPGNIIQSIRKAGTRNPVMMLDEVDKLGAGFQGDPA
                     SALLEVLDPEQNSTFRDNYLGVAFDLSRVMFIATANVLDTIPGPVRDRMEVIELPGYT
                     EDEKLEIARRYLLKRQLDTNGLTAEQCDITEDAIRTIIRDYTREAGVRNLERLIGAVC
                     RHVAMRVAEGTIERMRIEAGALPAILGPRRFENEVAMRTSIPGVATGLA"
     gene            complement(1859..2266)
                     /locus_tag="VIQ50_05980"
     CDS             complement(1859..2266)
                     /locus_tag="VIQ50_05980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013945933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HEY9359964.1"
                     /translation="MSAADPRNWMWAEACAMIERAEQLHRRFFQPGLAPAAGVNWEPP
                     VDVYESEQELTIVAALPGVEPQEIEIALERGVLRVAGVRQLPACVQGAAIHRLEIPHG
                     RFERRLRLPDQGWELGRSVLVNGCLVLTLTQSR"
BASE COUNT          379 a          794 c          790 g          433 t
ORIGIN      
        1 ggcaagtccg gtggcgacgc ccggtatgct cgtgcgcatg gcgacctcgt tctcgaaccg
       61 gcgcggccca aggatcgcgg gcagcgcgcc ggcctcgatg cgcatacgct cgatcgtgcc
      121 ctcggcgacg cgcatagcga cgtggcggca taccgcgccg atcaggcgct ccaaattgcg
      181 cacgcccgcc tcgcgcgtgt agtcgcggat gatggtcctg atggcgtcct cggtgatatc
      241 gcactgctcg gcggtgagcc cgttggtgtc aagctggcgc ttgagcagat agcgcctggc
      301 gatctcgagc ttctcgtcct cggtgtaacc ggggagctcg atcacctcca tgcggtcgcg
      361 aaccgggccg ggaatggtgt cgagcacgtt ggcggtggcg atgaacatca cccgtgagag
      421 gtcgaaggcg acgccgagat aattgtcgcg gaaagtcgaa ttctgctccg ggtcgaggac
      481 ttcgagcagc gcggaggccg gatcgccctg aaagccggcg ccgagcttgt cgacctcgtc
      541 gagcatcatc acgggattgc gcgttccggc cttgcggatc gactggatga tgtttcccgg
      601 cagcgcgccg atataggtgc gccgatgccc tctgatctcc gcctcgtcgt gcacgccacc
      661 gaggctcagg cggacgaact tgcgccccgt cgcgcgcgcg atgctctgtc cgagcgaggt
      721 cttgcccacg cccggcggtc caacgaagca gagaatcggg ctcctgccgt cgggcttgag
      781 cttgcgcacc gcgagatatt cgaggatgcg ccgcttgatc ttgggcagcc cgtagtgatc
      841 ctcgtccagg atgcggcgcg cttcggcgac gtcgatgttg tcggtgtcga gcttcgacca
      901 gggcagatcg atgagccaat ccaaataggc gcggatcatg ccgtattcgg cggcggcctc
      961 gggcatgcgc tcgagccgct tgagctcctt cgtcgcctga tccttggcct ccttcggcat
     1021 acccgccttt tcgaccgtct cgcgcagctc ggcgatctcg accgatttct cgtcaccctc
     1081 gcccagctcc ttctggatgt ggcgcagctg ttcgcgcagg atgtgctcgc gctgctgcga
     1141 ggacagcgat tgctgcgtct gctcgccgat ctgtttcgag agcttgagta cctcgatacg
     1201 ctgcgcaaga agcgcaagca ccttgtcgag ccgctcgcgg atatcgaccg tctccagcac
     1261 gtcctgcttt tccgacggct tggcgtcgag gatgctggca atgaaatcgg caagcgcgga
     1321 ggccgaatcc aggttttcga tcgtcgccgc cacttccggg ggaacgttgg ccaagagttg
     1381 gatggcttcg cgggcacggg ttcgcacgag gccgatgcgg gcctcgatat cgggtgtcat
     1441 cacctcggcg aggccgatct cctcgacccg ggcgaccagg aacggaaacc cgggcagctg
     1501 ctcgatcacg cggaagcgcc gcacgccttg cacgacggcg tgatgcgtcc cgtcgggggc
     1561 ggtgacgtag cgcaggatct gcgccgcggt ccccacccgg tgcaattggt ccaacgtcgg
     1621 ctcctcgacc gccggatcga tctgcaggag cacgccgagc gggcgctggt tgcgcaccgc
     1681 gctctgggcc gcggcgatgg acgatttgtg cccgatcgtc agcggcagca cgatgccggg
     1741 aaacagcacg agctgccgca ccggcaggag gatcatgctg tctggcggga acggcgggtg
     1801 gccctcgccc tgatcgagag gtctgctctg tgcctgttct gccatggcgt gcgccgtatc
     1861 accgggactg cgtgagggtg agaacgagac agccgttcac gagcacggag cggcccaatt
     1921 cccaaccttg gtcgggcagc cgcaagcggc gctcgaaacg tccgtgcggg atttccaagc
     1981 gatggatcgc ggcgccctgc acgcaggcag gcagctgccg cacgccggcg acgcgcagca
     2041 cgccgcgctc gagcgcgatt tcgatctcct ggggctcgac cccgggcagc gccgcgacga
     2101 tggtcaattc ctgttcgctc tcgtacacat cgaccggggg ctcccagttg accccggcgg
     2161 ccggcgccag cccgggctgg aagaagcgcc ggtgtaactg ttccgcccgc tcgatcatcg
     2221 cgcaggcttc ggcccacatc cagttcctcg gatcggctgc gctcatggca cctgaccttc
     2281 ttgcaatcgg atcatctcat cccagcctta aatcatactc gccattccgg ccgacccgcg
     2341 cgggctccca cgaaaatggc caagccgtgg ctcgccacac cgaatactgc aggacc
//
LOCUS       DATCWM010000315         3832 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_515469, whole genome shotgun sequence.
ACCESSION   DATCWM010000315 DATCWM010000000
VERSION     DATCWM010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3832)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3832)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3832
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_515469"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(94..1026)
                     /gene="ubiA"
                     /locus_tag="VIQ50_05985"
     CDS             complement(94..1026)
                     /gene="ubiA"
                     /locus_tag="VIQ50_05985"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008961399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008412 - 4-hydroxybenzoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HEY9359965.1"
                     /translation="MTRGAGRVADSTGNWVDRLAPAWTRPYLRLARLDRPIGSWLLLL
                     PCWWSVGLAAVGAREGVNFWHLVLFFVGAFAMRGAGCTWNDIVDRDLDARVERTRSRP
                     IPSGQVTVATAAAFLALQAMIGLAVLLQFNRFTIYVGLASLGVVAVYPFMKRITYWPQ
                     IVLGLAFSWGALMGWPATFAQLDPPAFLLYAGAISWVIGYDTIYAHQDREDDALIGIK
                     STALLFRERTKPMLALFYALAVALIALAGFSAGAGLIFALGLLAFALHLAWQIARLDV
                     DDPINCLAVFKSNRDAGLILFAGLVLDAAAAHAI"
     gene            complement(1023..1595)
                     /locus_tag="VIQ50_05990"
     CDS             complement(1023..1595)
                     /locus_tag="VIQ50_05990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359966.1"
                     /translation="MRLSRTLPLALALATLPLWPAAGQFGGMPGLPGSPGMSPAPGAG
                     AGMPGGAFAPQQPPPGCQQLLTDREEVGKHGKALQTAGQKKAPPEELCKLFKAFLTAE
                     TKMIKSLQDNSATCGVPPEVLKQVKDGHSKASDVGKKVCDAAAQGPRPAAPSLSDALG
                     ATPTVPDPSSSTKKGQSTFDTLTGSPLNTR"
     gene            1829..2587
                     /locus_tag="VIQ50_05995"
     CDS             1829..2587
                     /locus_tag="VIQ50_05995"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HEY9359967.1"
                     /translation="MPRCSSRTPRLYVDAPLEEGASVALSPAQAHYLGNVLRLKTGDG
                     AVVFNGRDGEWRGVLAATRSRRLTLTIAERTRAQQDPRDLHYLFAPLKHARLDYMAQK
                     AVEMGASCLQPVLTRHGQVARVSLERMRANAIEAAEQCGIMTLPEIRPPLTLQQAIAA
                     IEPERVLVFCDEEAPVNDPIAALAQARRGDQKEALALAVLIGPEGGFAAEERAALLRV
                     PNAVRLSLGPRVLRADTAAVAALALVGAVLGDWR"
     gene            2789..>3832
                     /locus_tag="VIQ50_06000"
     CDS             2789..>3832
                     /locus_tag="VIQ50_06000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012041922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HEY9359968.1"
                     /translation="MTSARVIPTSTAPDARADALIAAFERAGYARVAPAILQPAEPFL
                     DLSGEDIRKRMYLTSDPQGRELCLRPDLTIPVSRDYLASPAAGKPRGFCYLGPVFRHR
                     GEGVGEFLQAGIESFGRDDTAAADAEMLALGLNATAHYGLAAPAIRMGDVGLFAALVA
                     ALDLAPAWKRRLIKDFNHKTSLAHDLDQLTVGASSARPEYQGVLAALAGADPKGAHAL
                     ITDLLSIAGISAVGGRSVSEIADHFLEQATLGAQVSLPRQTRALIEQFLGIAGDPESA
                     AVKLNAFAREANIALKPALELFESRIGRLAARGVELRRIHFSTAFGRGLDYYTGFVFE
                     LHDPRAQTDGPLVA"
BASE COUNT          630 a         1327 c         1274 g          601 t
ORIGIN      
        1 ccttcgtttt cccggcatat tcgaactgcg cagcgcctgg cataggcgcc ggcgcaatgc
       61 aggaggcatc gcgctcgcgc gtgattgaac cgctcaaatc gcgtgcgcgg ccgccgcatc
      121 cagcaccagc ccggcgaaca ggatcagccc ggcatcccgg tttgatttga acacggccag
      181 gcaattgatg ggatcgtcga catcgagccg tgcgatctgc caggcaagat gcagcgcgaa
      241 ggcaagaagc ccgagcgcga agatcagccc tgctccggcg ctgaagccgg caagcgcgat
      301 cagcgccacg gcgagcgcgt agaacagcgc gagcatcggc ttggtgcgct cgcggaagag
      361 cagcgccgtc gacttgatgc cgatgagggc gtcgtcctcg cgatcctgat gggcgtagat
      421 ggtgtcatag ccgatcaccc aggaaatcgc gccggcgtag agcaagaagg cgggcggatc
      481 gagttgcgcg aacgtcgcgg gccatcccat cagcgcgccc caggagaagg cgaggccgag
      541 cacgatctgc ggccaatagg tgatgcgctt catgaaggga taaacggcga ccacgccgag
      601 cgaagcgagc ccgacataaa tcgtgaagcg attgaactgc agcaggactg cgagcccgat
      661 catcgcctgc agcgcgagaa aggcggcggc ggtggcgacg gtcacctgtc ccgacgggat
      721 cggtcgcgag cgcgtgcgct cgacgcgcgc atcgagatcg cgatcgacga tgtcgttcca
      781 ggtgcagccc gccccgcgca tggcgaacgc gccgacgaag aacaggacga gatgccagaa
      841 attgacgccc tcgcgcgcgc caaccgcggc caggccgacg gaccaccagc agggcagaag
      901 caggagccag gatccgatcg gccggtcgag gcgcgccagc cgcaggtaag gccgcgtcca
      961 cgccggcgcg aggcgatcga cccaattgcc ggtcgaatcg gcgacgcggc ccgcgccgcg
     1021 agtcatcgcg tattaagcgg acttccggtg agcgtatcga aggtcgactg ccccttcttg
     1081 gtcgagctcg agggatccgg caccgtcggc gttgcgccga gcgcatcgct cagactgggg
     1141 gcggcggggc gcggcccttg tgccgcggcg tcgcacactt tcttgcccac gtccgaggcc
     1201 ttgctgtgtc cgtccttgac ttgcttgaga acctcggggg gaaccccgca ggtcgcgcta
     1261 ttgtcctgca agctcttgat catcttggtc tcggccgtca ggaacgcctt gaaaagcttg
     1321 cacaattcct caggcggggc cttcttctga ccggccgtct ggagcgcttt gccgtgtttg
     1381 ccgacctcct cgcggtcggt caaaagttgc tggcagccag ggggcggctg ctgcggcgcg
     1441 aatgcgcctc ccggcatgcc ggcacctgcg cccggcgccg gtgacatccc aggcgagccg
     1501 ggaaggcccg gcatgccgcc aaattgcccc gctgccggcc ataacggcag ggtggccagt
     1561 gccaacgcca acgggagagt tcggctgagc ctcataacga tgtgtccccc ggccgcgcga
     1621 ctcgacgccg cccgatcctg cggcccaacg tattaacagc gctttgaatt cggcgataac
     1681 acggcagccg ggtacgccca cggccggcgt ggacgcccac gggccaaagc gacggggatg
     1741 gagaagtccc ctatttgccc gtcccgctgt gattttactc caaactggcc ggcaacggcc
     1801 tcgtcctgag ccccgattgt ttgcccccat gcctcgctgc tcatcccgca cccctcgcct
     1861 ttatgtcgat gccccgctcg aggaaggcgc gagcgtggcg ctctccccgg cgcaggcgca
     1921 ttacctcggc aacgtcttgc ggctgaaaac cggcgatggc gctgtggttt tcaacggccg
     1981 ggacggcgaa tggcggggag tactcgccgc cacccgatcg cgccggctca cgctgaccat
     2041 cgcggagcgc acccgtgcgc agcaagatcc ccgcgatctg cactacctgt ttgcgccgct
     2101 caaacacgcg cgcctcgact acatggcgca gaaggcggtc gagatgggcg cctcttgcct
     2161 gcagccggtg ctcacccggc atggccaagt cgcgcgcgtg agcctcgagc gcatgcgcgc
     2221 aaatgcgatc gaggcggcgg aacagtgcgg catcatgacg ctgccggaga tccgcccgcc
     2281 gctgaccctg cagcaggcaa ttgccgcgat cgaacccgag cgcgtgctcg tgttctgcga
     2341 cgaggaggcg ccggtgaacg acccgattgc cgcgctggcg caagcacgaa ggggcgacca
     2401 aaaggaagca cttgcactcg ccgtgctcat cggtccggag ggaggctttg ctgcggagga
     2461 gcgcgccgcg ctgctgcgcg tgccgaacgc ggttcggctt tcgctggggc cgcgggtgtt
     2521 gcgggccgac acggcggcag tcgccgccct cgcgctggta ggggcggtgc tcggcgactg
     2581 gcgctgagcg cttccgcggc aactcaagcg cccgctgcga ccttctcggt tcgctccttt
     2641 cccaattcag gcgatcgcgg tgggcccgtc cgccaccccc taagccactg catctcctgc
     2701 gttaagcgcg tctgcgcttt ggcatcgaat tgacggcgca gccatgctaa agcgccgccg
     2761 ccaccggctc atccgtcgcg agcgcgccat gacgagtgca agagtcatcc cgacgagcac
     2821 cgcgcccgat gcgcgggcgg acgcgctgat cgcggcgttc gagcgcgcgg gctatgcgcg
     2881 ggtggcgccc gcgatcctcc agccggcgga gccgttcctc gacctctccg gcgaggacat
     2941 ccgtaagcgc atgtatctca cgagcgatcc gcagggacgc gaactgtgcc tgcgccccga
     3001 cctcaccatt ccggtgtcgc gcgattacct cgcctcgcct gccgccggca agccgcgcgg
     3061 cttttgttat ctcggtccgg tgttccgtca ccgcggcgag ggcgtcggcg aattcctgca
     3121 ggccggcatc gaatccttcg gccgcgacga caccgcggcg gcggacgccg agatgctcgc
     3181 gctcgggcta aatgcgacgg cgcactatgg tcttgccgcg cccgccatcc gcatggggga
     3241 cgtcggcttg tttgccgctc tggtcgcagc gctcgatctc gcgcccgcct ggaagcggcg
     3301 cctgatcaag gatttcaacc acaagacgtc gctggcgcac gatctcgacc agctcaccgt
     3361 cggcgcgtcg agcgcacggc cggaatatca aggcgtactc gccgccctgg ccggcgccga
     3421 ccccaaaggc gcgcatgcgc tgatcaccga cctcctctcg attgcgggga tcagcgcggt
     3481 gggcgggcgc tcggtgagcg agatcgccga ccatttcctt gagcaggcga cgctcggcgc
     3541 gcaggtctcg ctgccgcgcc agacccgggc gctgatcgaa cagttcctcg gcatcgccgg
     3601 cgatcctgag agcgccgccg tcaagctcaa tgcatttgcg cgcgaggcca acatcgcgct
     3661 caagcccgcg ctcgagctat tcgagagccg catcggccgc ctcgccgccc gcggcgtcga
     3721 gctgcgccgc atccatttct ccaccgcctt cggccgcggg ctcgattact acaccggctt
     3781 tgtgttcgag ctgcacgacc cgcgcgcgca aacggacggt ccgctggtgg cg
//
LOCUS       DATCWM010000316         3338 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_499080, whole genome shotgun sequence.
ACCESSION   DATCWM010000316 DATCWM010000000
VERSION     DATCWM010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3338
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_499080"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..930)
                     /gene="rocD"
                     /locus_tag="VIQ50_06005"
     CDS             complement(<1..930)
                     /gene="rocD"
                     /locus_tag="VIQ50_06005"
                     /EC_number="2.6.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018267718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004587 - ornithine aminotransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine--oxo-acid transaminase"
                     /protein_id="HEY9359969.1"
                     /translation="MNAIELEARYSAPNYAPLPVVLTRGEGAHLWDTDGRRYVDMMSA
                     YSAASHGHAHPRILAALTAQATRLAVPSRAYYNDRLGALLEELCKLTGLDAALPMNTG
                     AEAVETAIKAARRWGYRVKGIARDRAEIIVANGNFHGRTTTVTSFSTEPDYRDGFGPF
                     TPGFRPVDFGDLAAVERAITPETAAVLVEPIQGEAGVIVPPEGFIAGLRRICDAHRVL
                     LILDEVQSGLGRTGAWLAYEHEGIRPDGVILGKALGGGMLPVSAFVARREVMDVFTPG
                     SHGSTFGGNPLAAAVALEALHVIRDEGLVEKSRV"
     gene            complement(1079..1582)
                     /locus_tag="VIQ50_06010"
     CDS             complement(1079..1582)
                     /locus_tag="VIQ50_06010"
                     /inference="COORDINATES: protein motif:HMM:NF013224.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HEY9359970.1"
                     /translation="MPAKRPPALDRIDVKILAALQRDGRSTIQKLAQTVGLSPRASLE
                     RVRRLEAAGVIAGYQAVLELGRLSRPVNIFAEIILERHANRGRFEKRLAAIEEVVECW
                     EVSGTVDYVARFVCADLAAYEELTTALIDDENLGVARIVSHVALRPVRRFAGYPVSLL
                     GQQSSKR"
     gene            1913..3171
                     /locus_tag="VIQ50_06015"
                     /pseudo
     CDS             1913..3171
                     /locus_tag="VIQ50_06015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009026416.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            complement(3178..3279)
                     /locus_tag="VIQ50_06020"
     CDS             complement(3178..3279)
                     /locus_tag="VIQ50_06020"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEY9359971.1"
                     /translation="MPRTTVITRQVLDDMNATTLRDALRYVPGVGVR"
BASE COUNT          532 a         1046 c         1109 g          651 t
ORIGIN      
        1 cacgcggctc ttctccacca gcccctcgtc gcggatgacg tggagcgcct cgagggcgac
       61 tgccgccgcg agcgggttgc cgccgaaggt cgagccgtgc gagcccggcg tgaatacgtc
      121 catcacctcg cggcgcgcga cgaaggcgga aaccggcagc atgccgccgc ccagcgcctt
      181 gcccaagatg acgccgtccg gacggatgcc ttcgtgctca taggcgagcc acgcgccggt
      241 gcggccgagc ccggactgca cctcgtcgag gatgagcagc acgcggtgcg catcgcagat
      301 ccggcgcagg ccggcgatga agccctcggg cgggacgatg acgcccgcct cgccctggat
      361 cggctcgacc agcacggcgg cggtctccgg cgtgatcgcg cgctcgaccg cggcgagatc
      421 gccgaagtcc accgggcgga atccgggcgt gaacggtccg aagccgtcgc ggtaatcggg
      481 ctcggtcgag aacgaggtga cggttgtcgt gcggccgtgg aaattgccgt tggcgacgat
      541 gatttccgcg cgatcgcggg cgatgccctt gacccgatag ccccagcggc gcgccgcctt
      601 gatcgcggtc tcgaccgcct ccgcgccggt gttcatcggc agcgcggcgt cgagcccggt
      661 gagcttgcac agctcctcga gcaaggcccc gaggcggtcg ttgtaataag cccgtgaggg
      721 cacggcgagg cgtgtcgcct gtgccgtcaa cgcagcgagg atgcgcggat gggcgtggcc
      781 gtggctcgcg gccgaatagg cgctcatcat gtcgacgtag cgccgcccgt ccgtgtccca
      841 cagatgcgcg ccttccccgc gcgtcagcac gacgggaagc ggcgcgtagt tcggcgcgct
      901 gtagcgggcc tcgagctcga tggcgttcat ggcacgtctc cgcatcgcta caagcgaatc
      961 atcgctcgcg ttgcacaatg gatttatgtg ttagctgcgg cttgtgcggc ggaagtgagg
     1021 gtgcggtgcg gccgattcgg cggtcagcgc ggcttggcgc ggcggaaacg gcggttgctc
     1081 aacgtttcga tgattgctga cctagcagcg atacgggata gccggcgaag cggcgtaccg
     1141 ggcgcaacgc cacatggctg acgatgcgcg ccacgccgag attttcgtcg tcgatcagcg
     1201 cggtggtgag ctcttcgtag gctgcgagat cggcgcaaac gaaacgcgcc acgtagtcga
     1261 ccgtgccgct cacctcccag cactccacga cctcctcgat cgcggcaagc cgcttctcga
     1321 agcggccgcg gttggcgtgc cgctccaaga tgatctcggc gaagatgttg accggccgcg
     1381 acaggcggcc gagctcgagc acggcttgat agccggcgat gacgccggcg gcctccaggc
     1441 gccggacccg ctcgagcgag gcgcgcggcg acaatcccac cgtctgcgcc aatttctgga
     1501 tggtcgagcg cccgtcgcgc tgcagcgcgg cgagaatctt gacgtcgatg cgatccagag
     1561 cgggcgggcg cttggcgggc atgaggtctg cttccataga tgcgcgacgt ggtcgatcaa
     1621 tcgattattt ccggcgctta gtgcgatgtg ctcatcacgc gggcgcgact gacccactca
     1681 gcttggctct catcgtgcag gatatccatc ccgcgcaggc cagtcagcgg ggacgccacc
     1741 tcgcgggacc tgcagaacac cttgcgaacc cggatgttcg gtttgggact tttgccgtcc
     1801 gctctcccgg aaccttcgcc gaacgtaggc agttcttgtg gcatccaaac accccgttgt
     1861 gcgcttggtt gtggggtagc tagtggtcac acttcgtcgc cgagagcgtg aattggcgcg
     1921 cgcgagccgc gcgcttgacg ctgccaattt cttcttggct gacgtgcgtg acgcgcttgg
     1981 gccgtacctc gcggtgtatc tgctgaccga acgtgaatgg gatgccgcca gcattggcct
     2041 cgtcatgtcg attagcacga ttgcgggcat ccttgcgcaa actccgtcag gcgcgttggt
     2101 ggatgcgacc aaggccaaac gcggcgtcat ggtcgcagcc gcagttctcg tcaccgcggc
     2161 atccctcgtt gttccttggc tatcgtcgtt ttggcccgtg gccgtttctc aggcaacggc
     2221 gcatgcggcc ggtgtcgtgt tcggacccgc ccttgcggcc gtcacgctcg gcatctttgg
     2281 acatggagcc ttcaccaagc ggatcggacg caacgaaggc ttcaatcacg ccggtaatgc
     2341 cttcgcagca gccactgccg gtgcgctggc ttatttttgg gggccgcaag tcgtctttta
     2401 cctgcttgcc tcgatggcga tagcgagcag cgtgagcatt cttgctattc ccaagcagtc
     2461 tattgaccat aatcttgctc gcggccttaa cgatgcgaaa tcgcacgacg ccaaagcgac
     2521 gggagacgat cgccctactg ggttggccgt gcttctgacc tgccggccgc tcctgatctt
     2581 cgccggttgc gcgatcatgt ttcactttgc aacgcggcga tgctgccgct ggtcggccaa
     2641 aaactcgcgc tccaggacaa gaacctcggc acgagtctca tgtcagcatg catcgttgcc
     2701 gcgcaagtcg tgatggtgcc catggcaatg ctggttggcg cgaaggtcga tgcctggggg
     2761 cgcaaaccgc tattcttgat tgcgctctcg gttcttacgg ttcgtggctg tctctatcca
     2821 ctctcggaca atccctattg gctcgtaggc gtccagttgt tggatggggt cggtgccggc
     2881 atctatggtg cggtctttcc ggtgatcgtc gctgatctca tgcggggcac tggccgtttt
     2941 aacgttgcgc aaggtgcgat catcaccgcg caagggatag gtgcggcgct atccaccacg
     3001 ctcgctggaa tcgtggttgt ccaggcaggg tacagcgcgg cgttccttac gcttgccggt
     3061 gtcgccatcg ttgggcttgg gatttatttc tttgtgatgc cggaaacaca gccccgagtg
     3121 ccggccaaag ccgaaggtac ccgaagaaag gtcgtgctcg ctggcgagta ggaacttcta
     3181 tctcacgccc acgccgggca catagcgcag cgcatcccga agcgtcgtgg cgttcatatc
     3241 gtcgaggact tgtctggtga tgacggtggt gcggggcagt tttgcggccc gcgggagtcc
     3301 gtcggggcca taggatgaat accacgccga tcgagcag
//
LOCUS       DATCWM010000317         3748 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_520760, whole genome shotgun sequence.
ACCESSION   DATCWM010000317 DATCWM010000000
VERSION     DATCWM010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3748)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3748)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3748
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_520760"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(241..2169)
                     /locus_tag="VIQ50_06025"
     CDS             complement(241..2169)
                     /locus_tag="VIQ50_06025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY9359972.1"
                     /translation="MASDDKVNILLVDDQPAKLLSYEAILAGLGERLIKAASAKEALE
                     YLLKHDIAVILVDVCMPELDGFQLAAMIREHPRFQRTAIIFISAIHLTDVDRLRAYEM
                     GAVDYVPVPVIPEVLRAKVKIFAELYRKTRQLEQLNQELERRVAERTAELEASTARLL
                     QSEDRRSLALAAGQMGSWEWDPVNGRFVWDDGQYRIFGVDPATFELSVDNVRALIHPE
                     DWKHLQNAIKPAAPNTPSFQSEFRVCRPNGELRWCIGTAVASVDATDNVVRISGVTVD
                     ITDRKEAEERQVLLAREVDHRARNALALVQSIVRLTRSDNIKSYITAVDGRIGALARA
                     HTLLAQSRWQGADLARLVNEELAPFRTDGPERATIVGPDVSLEPRTAQTLALALHELA
                     TNAAKYGALSVRAGRVAVDWDLRPHGLLLRWTESGGPQPQPPVAPGFGIRLISASIER
                     QLAGEAVFDWRPEGLYCTLRVPCRDQIEALSHRAGAHARVSEERFDLPLRLDTGNRVL
                     LVEDEILVAMMMKDILTELGFSVVGPFSRLGEAMVAAVHEEINAGIIDVNLGGEFVYP
                     VADVLTARKIPFVFITGYGVESIDSRFGYVPIVKKPVQRQVLQTIFAAPEAGEATRLS
                     KRRYGAERAGRAASATQP"
     gene            complement(2186..>3748)
                     /locus_tag="VIQ50_06030"
     CDS             complement(2186..>3748)
                     /locus_tag="VIQ50_06030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY9359973.1"
                     /translation="DHPVLNQAPTVVAFEVSDSGIGIPQEKQKVIFEAFMQADASTSR
                     KYGGTGLGLAISRELSNLLGGEIQLRSAPNMGSTFTLYLPLRYVGPSTAPKPAAAPAQ
                     ATHAPIVPALPERPIEAIPDDRLEIHPGDSILLIVEDDPHYARIMVDLAREKGFKVLV
                     AARGIDALELAKQYQPTAVSLDVFLPDMLGWTVLSQLKQNPLTRHIPVQIITLDEDRQ
                     HGMARGAFSFVTKPASTEGVEAALARIKEYAKPRRKRLLVVEDDGAEQRSISELLGHD
                     DIEIVTAATGAEALRVLRRDPFDCVVLDLRLPDMSGFEVLEELRGDAKLSDVPVVVFT
                     GRELSAEEDAELHTMARSIVVKGVESPERLLDETALFLHRVVTELPPEKQRMLERLNS
                     SDEDLVGRTVLLIDDDARNIFALSSVLERRGMRVLTATTGREAIALADATPDLAIALM
                     DIMMPEMDGYQTIHAIRQKPDFRRLPIIALTAKAMKGDREKCMEAGASDYLAKPVNTE
                     QLLSALRMWLHR"
BASE COUNT          621 a         1225 c         1219 g          683 t
ORIGIN      
        1 ttttgagcag tgcgcaggcc aagcgcccac gcaaacggcc ttgccggccc ggtatgctgc
       61 aaagcagcaa agaccgtgcc aagcgctcgt tattgttttt attgaagaat ccttgctgct
      121 gcggcccatg ctgcgccgtc cggctgggca ggccacaagc ttcaggttga aattctatgc
      181 agccggcgtg aggcgaactt ggggggtcgt tccgcccccc cggcgggcgc cttcggccgc
      241 tcagggctgg gtcgcggacg cagcgcggcc ggcccgttct gccccgtatc gccgcttgga
      301 caatcttgta gcctcgccgg cctcgggagc agcgaagatc gtctgcagca cttgccgttg
      361 caccggcttc ttgacgatcg gcacgtagcc gaacctgctg tcgatgctct cgacgccata
      421 gccggtgatg aagacgaacg gaattttccg cgccgtcagc acgtcggcga ccgggtagac
      481 gaattcgccc ccgagattga cgtcgatgat gccggcattg atctcctcgt gcaccgcggc
      541 gaccatggcc tcgccaagcc ggctgaacgg cccgaccacc gagaagccga gttcggtcag
      601 gatgtccttc atcatcatcg cgaccaagat ctcgtcctcg accaaaagca cgcgattgcc
      661 ggtgtcgagc cggagcggaa gatcaaacct ctcctcgctc actctcgcat gcgcgccggc
      721 acggtgggag agcgcttcga tctgatcgcg gcacggaacg cgcagcgtgc aatacagtcc
      781 ttcggggcgc caatcgaaaa cggcttcgcc cgcgagctgc cgctcgatac tggcgctgat
      841 cagcctgatg ccgaaacccg gcgccaccgg cggctgcggc tgcggtccgc cgctctcggt
      901 ccagcgcagc agaaggccgt gcggccgcaa gtcccagtcc actgcgaccc gtcccgcccg
      961 caccgatagc gcgccgtact tggcggcatt ggtggcgagc tcgtgcagcg cgagcgcgag
     1021 ggtttgcgcg gtgcgtggct cgagcgacac gtcgggaccg acaatcgtgg ccctttccgg
     1081 gccgtccgtg cgaaacgggg cgagctcttc gttcacgaga cgggcgagat cggcgccttg
     1141 ccagcggctc tgggcgagca gcgtgtgcgc gcgcgccagc gcaccaatcc gcccgtcgac
     1201 cgcggtgata taggacttga tattgtcgga gcgagtcaaa cgcacgatgg attgcaccag
     1261 cgccaaggca ttgcgcgcgc gatggtcgac ctcgcgcgcc aacagaacct gccgctcttc
     1321 ggcttccttg cgatcggtaa tgtcgacggt cacgccgctg atgcgcacaa cattgtcggt
     1381 ggcgtcgacg cttgccaccg ccgttccaat gcaccagcgc aactcgccgt tggggcggca
     1441 gacgcgaaac tcgctctgaa agctcggcgt attgggagcg gccggcttga tggcgttttg
     1501 cagatgtttc cagtcctcgg gatggatgag tgcccggacg ttgtcgaccg agagctcgaa
     1561 agtggcggga tcgacgccga aaatccgata ctgtccgtcg tcccagacaa agcggccatt
     1621 gaccggatcc cattcccagg atcccatctg cccggcggcc agcgccaagc tgcgccggtc
     1681 ttcgctctgc aacagccgcg cggtcgaagc ctccaattcc gcggttcgct cggcgactcg
     1741 gcgctcgagc tcttggttga gctgctcgag ctgcctcgtc ttgcgataga gctcggcgaa
     1801 gatcttgacc ttggcgcgca gcacctcggg aatgaccggc accggcacgt aatcgacggc
     1861 ccccatttca taggcacgca ggcggtcgac gtcggtcaaa tggatggcgg aaatgaagat
     1921 gatcgcggtg cgctgaaacc gcggatgctc gcggatcatc gcggccaact ggaagccgtc
     1981 gagctccggc atgcatacgt cgacgaggat gacggcgatg tcgtgcttga gcaggtactc
     2041 gagcgcttct ttggccgagg cggccttgat cagcctctcg cccagtccgg cgaggatggc
     2101 ctcatagctc agcagcttgg ctggttgatc gtccaccagc aggatgttga ccttgtcgtc
     2161 cgaggccatc ccaaatctcc gcggctcagc gatgcaacca catgcgcagc gccgatagga
     2221 gctgctcggt attcacgggc ttggccagat aatcggacgc gcccgcttcc atgcacttct
     2281 cgcggtcgcc cttcatggct tttgccgtga gcgcgatgat cggcagtcgc cggaaatccg
     2341 gcttttgccg gatcgcgtgg atggtctgat acccatccat ttccggcatc atgatgtcca
     2401 tgagcgcgat ggctagatcg ggcgtggcgt cggcaagcgc gatcgcctct cggccggtgg
     2461 tggcggtgag gacgcgcatg ccgcgccgct ccagcacgct cgacagagcg aagatgttgc
     2521 gcgcgtcatc gtcgatcagc agcacggttc gtccgacgag gtcctcgtcg gagctgttga
     2581 gccgctccag catgcgttgc ttctccggcg gaagctcggt gacgacgcgg tgcaggaaca
     2641 aagcggtctc gtcgagcaga cgctcgggcg attcgacgcc cttgacgacg atgctgcgcg
     2701 ccatggtgtg cagctcggca tcttcctccg ccgacaattc ccgtcccgtg aacaccacca
     2761 ccggcacgtc ggagagcttg gcgtcgccgc gcagctcctc caacacctcg aaccccgaca
     2821 tgtccgggag ccgcaggtcg agcacgacac agtcgaaggg gtcgcggcgc agcacgcgca
     2881 acgcctccgc cccggttgcg gcggtgacga tctcgatgtc gtcgtggccg aggagttccg
     2941 aaatgctcct ctgctcggcg ccgtcgtcct ccacgaccag caggcgtttg cggcgcggct
     3001 tggcgtactc cttgatccgc gccaaggccg cctccactcc ctcggtggag gccggtttgg
     3061 tgacgaagga gaacgcgccc cgcgccattc catgctgacg gtcctcgtcg agcgtgatga
     3121 tctgcaccgg aatgtgccgt gtcagcgggt tctgtttgag ctggctcagc acggtccagc
     3181 ccagcatgtc ggggaggaac acgtcgagcg agacggcggt cggttggtac tgcttcgcga
     3241 gctcgagcgc gtcgatgccg cgcgccgcga ccagcacctt gaatcccttc tcgcgcgcca
     3301 agtcgaccat gatgcgggca tagtgtggat cgtcctccac tatgagcagg atggagtcgc
     3361 cggggtggat ctcgagccga tcgtcgggga tcgcctcgat cggccgctcc ggcagtgcgg
     3421 ggacaatggg cgcatgcgtc gcctgcgcgg gggcggcggc cggcttcggc gcggtgctcg
     3481 ggccgacgta tcgcagcggc aagtacagcg tgaacgtgct tcccatgttg ggcgcgctgc
     3541 gcagctggat ctcgccgccg agcaggttcg acagctcgcg gctgatcgcc agccccagcc
     3601 cggtgccgcc gtacttgcgg ctggtgctgg cgtcggcctg catgaacgcc tcgaaaatga
     3661 ccttctgctt ctcctgcgga atgccgatgc cgctatcgga aacttcgaac gcgaccaccg
     3721 tcggcgcctg gttgagcaca ggatggtc
//
LOCUS       DATCWM010000318         4732 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_536777, whole genome shotgun sequence.
ACCESSION   DATCWM010000318 DATCWM010000000
VERSION     DATCWM010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4732)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4732)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4732
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_536777"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            62..1666
                     /gene="ctaD"
                     /locus_tag="VIQ50_06035"
     CDS             62..1666
                     /gene="ctaD"
                     /locus_tag="VIQ50_06035"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit I"
                     /protein_id="HEY9359974.1"
                     /translation="MDTIAKAHGEDQHDHPHGWRRYLYSTNHKDIGTMYLVFALLGGL
                     VGGVLSIGMRLELMHPGLQFFHDAHMFNVFTTAHGLIMIFFMVMPAMIGGFGNWMVPL
                     MIGAPDMAFPRMNNISFWLLPASFTLLIISLFVEGEPGAPGVAAGWTIYAPLSTTGHP
                     GPAVDFAILSLHLAGASSILGAINFITTIFNMRAPGMTMHKMPLFVWSQLVTVFLILL
                     AMPVLAGAITMLLTDRNFGTTFFTPSGGGDPLLFQHLFWFFGHPEVYILIVPGFGIVS
                     QIVATFARKPVFGYLGMAYAMVAIGGIGFLVWAHHMYTVGMSTAVQAYFVVATMVIAV
                     PTGVKIFSWIATMWGGSLEFKTPMLWAIGFIFLFTVGGVTGVVLANAGVDRSLQDTYY
                     VVAHFHYVLSLGAVFTIFAGWYYWFPKMSGYMYSEPIGKLHFWLTFIGVNIVFFPQHF
                     LGLSGMPRRVADYPDAFAGWNLVSSIGSYISGVGALVFFFGVAHAFMRKEHAADNPWG
                     AGATTLEWTLPSPPPFHQYNELPLIK"
     gene            1757..2656
                     /locus_tag="VIQ50_06040"
     CDS             1757..2656
                     /locus_tag="VIQ50_06040"
                     /EC_number="2.5.1.141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008495 - protoheme IX farnesyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0048034 - heme O biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme o synthase"
                     /protein_id="HEY9359975.1"
                     /translation="MAPLACEPSIATVTDYLALMKPRVMSLVVFTALVSIMIAPGHIH
                     PMIGFTALLCIAVGAGAAGALNMWYDADIDALMSRTLSRPIPRGRIAPGEALAFGIVL
                     AAFAVAVLGLLVNWLAAALLAFTIFFYVVVYTAWLKRWTPQNIVIGGAAGSLPPVIGW
                     AATTGGLAVEPCLLFLIIFFWTPPHFWALSLVRVDDYARARLPMLPVVAGVEETRRQI
                     LCYSLALVPIGATPWLFGYAHALYGLTALGAGALMVMFAWRVCKQREGERTNRAAHQL
                     FAFSILYLFILFAVLLIDARVVG"
     gene            2675..2833
                     /locus_tag="VIQ50_06045"
     CDS             2675..2833
                     /locus_tag="VIQ50_06045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018460005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoxF protein"
                     /protein_id="HEY9359976.1"
                     /translation="MEEKPQRIVLSEEQRRTRRARSIAIALALAALVILFYVVTLVKG
                     PAVLNRPL"
     gene            2839..3438
                     /locus_tag="VIQ50_06050"
     CDS             2839..3438
                     /locus_tag="VIQ50_06050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012030174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HEY9359977.1"
                     /translation="MGMPKISSQRRRDLLVAGACGVFVAAMVGAAYAAVPLYNWFCRT
                     TGFGGTPQVATAAPSDILGRKLKVRFDANVAGGLPWRFEPEQSSIEVKVGEVVTVSYR
                     VVNESARETVAIASYNVSPPTAGAYFSKINCFCFTDQRLKAGETRDMAVVFFVAPDIV
                     KDSEQDRLETITLSYTMYPARQAEPARGDNGAALAAGRS"
     gene            3496..4359
                     /locus_tag="VIQ50_06055"
     CDS             3496..4359
                     /locus_tag="VIQ50_06055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HEY9359978.1"
                     /translation="MAEAHAKPHHDYHLVAPSPWPAVGAVSAFVTAFGGITWMHHMFA
                     AAPYIFGVGVIGIAYTMIGWWTDVAREATYEGYHTRVVQISHRYGMILFIASEVMFFV
                     AWFWAYFNSALFPADVQQLTREQLFGGVWPPKGIETFDPWHLPLLNTLILLTSGTTAT
                     WAHHALLENDRQGLKWGLILTIALGLAFTCVQAYEYSHAGFNFSGNVYGATFFMATGF
                     HGAHVIIGSTFLIVCLLRAYLGHFTPTQHLGFEFAAWYWHFVDVVWIFLFSCIYVWGS
                     GGANVAHAAGH"
     gene            4565..>4732
                     /locus_tag="VIQ50_06060"
     CDS             4565..>4732
                     /locus_tag="VIQ50_06060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY9359979.1"
                     /translation="MAGYDAIIIGTGQAGPALARRLVAADWKVAVIERKFFGGTCVNT
                     GCTPTKALVASA"
BASE COUNT          765 a         1433 c         1448 g         1086 t
ORIGIN      
        1 tgccgcagtg atgccccggg ggcgggggtc tgcgcggacg gcaatccgaa ggacctaagt
       61 catggatacg atcgcgaaag ctcacggcga ggaccagcac gatcatcccc atggttggcg
      121 gcgctatctc tattcgacca accacaagga catcggcacg atgtacctcg tattcgcact
      181 gctcggcgga ttggtgggcg gagtgttgtc gatcggcatg cggctcgaac tgatgcatcc
      241 tgggctgcag tttttccacg acgcgcacat gttcaacgtg ttcacgacgg cgcacggcct
      301 gatcatgatc ttcttcatgg tcatgccggc gatgatcggc gggttcggca actggatggt
      361 accgctgatg atcggcgcgc ccgacatggc gtttccgcgg atgaacaaca tttcgttttg
      421 gctgctgccg gcatccttca cgctgttgat catctcgctg ttcgtggagg gcgagcccgg
      481 tgcgccgggc gtggccgcgg gatggacgat ctatgcgccg ctctcgacca ccggccatcc
      541 ggggccagcg gtcgatttcg ccatcctgtc gctgcacctt gccggtgcat cgtcgatcct
      601 cggtgcgatc aatttcatca cgacgatctt taacatgcgt gctccgggaa tgacgatgca
      661 caagatgccg ttgttcgtct ggtcgcagct ggtgacggta ttccttattc tgcttgcgat
      721 gccggtgctc gccggcgcca tcaccatgct gctcaccgac cgcaacttcg gaaccacctt
      781 cttcactccc agcggtggcg gcgaccctct cctgttccag cacttgttct ggttcttcgg
      841 acatcccgag gtctacatcc tgatcgtgcc cggcttcggg atcgtcagtc agatcgtggc
      901 gacgttcgcg agaaaaccgg tgttcggcta tctcggtatg gcctacgcca tggtggcgat
      961 cggcggaatc ggattccttg tgtgggcgca ccacatgtac accgtgggca tgtcgaccgc
     1021 ggtgcaagcg tatttcgtgg tcgccaccat ggtgatcgcc gtcccaaccg gcgtgaagat
     1081 tttttcgtgg atcgctacca tgtggggcgg ctcgctcgag ttcaagacgc cgatgctgtg
     1141 ggcgatcggc ttcatatttc tgttcacggt cggcggcgtg accggcgtgg tgctcgccaa
     1201 tgccggtgtt gatcgttcgc tgcaagacac ctattacgtg gtggcgcatt tccattacgt
     1261 gctttcgctg ggcgccgtct tcaccatctt cgccggatgg tattactggt tcccgaaaat
     1321 gtccggctac atgtattccg agccgatcgg caagttgcac ttctggctga ccttcattgg
     1381 ggtcaacatc gtcttctttc ctcagcactt ccttgggctc tccggcatgc cgcgccgcgt
     1441 tgccgactac cccgacgctt tcgccggctg gaacctggtt tcctcgatcg gctcttatat
     1501 ttcgggtgtc ggcgcgctgg tgttcttctt cggcgtggcc catgccttca tgcgcaagga
     1561 gcatgcggcg gacaacccgt ggggtgcggg cgcgaccacg ctcgaatgga cgctgccctc
     1621 gccaccaccg ttccaccaat ataatgagtt gccgttgatc aagtgatgaa ctgcagtcgc
     1681 gtatgtccgg tcttcaatcg agagcgcggg atcgatgtca tcgctgagtg agggtgcaca
     1741 gtttgcggga cgtaggatgg ctccgctcgc ctgcgagccg agcattgcca ccgtcacgga
     1801 ttatttggcg ttgatgaagc cccgcgtcat gtcgctcgtg gtgttcaccg cgttggtgag
     1861 catcatgatc gcgccgggac acatccatcc gatgatcggc ttcacggcgc tcctgtgcat
     1921 cgcggtcggc gccggggcgg cgggtgcgct caacatgtgg tacgacgcag acatagatgc
     1981 tctgatgagc cgcaccttga gccgtccaat tccacggggg cgcatcgctc ccggcgaggc
     2041 gctcgccttc ggcatcgtgc tcgctgcatt cgccgtggcc gtgctcggcc tcctagtgaa
     2101 ttggcttgcg gcggcgttgc ttgccttcac gatctttttt tacgtcgttg tctacacggc
     2161 atggctcaag cgatggactc cgcagaacat cgtgatcggc ggcgccgccg gctcgctgcc
     2221 tcccgtcatc ggctgggctg caacgaccgg cggtctggcg gttgaaccgt gtcttctgtt
     2281 cctcattatc ttcttctgga caccaccgca tttctgggca ttgtcgcttg ttcgtgtcga
     2341 cgactatgcc cgtgctcgac ttcccatgct ccccgtagtt gccggagtag aggaaacacg
     2401 gcggcagatc ctgtgttatt cgctcgccct cgtgcctatc ggcgcaacgc catggctttt
     2461 tggctatgca catgccctct atgggttgac cgcgctcggt gccggggcac tgatggtcat
     2521 gttcgcgtgg cgcgtatgca aacaacgcga aggcgagcgc accaaccgcg cggcgcatca
     2581 gcttttcgca ttttcaattc tttacctatt catcctgttt gcggtgctgc tgatcgacgc
     2641 gcgcgtggtg ggttagacgc ttgatggtga tggcatggag gagaagccac agcggatcgt
     2701 tctcagcgag gaacagaggc gcactcggcg ggcgcggtcg atcgcgattg cgctcgcgct
     2761 tgccgcgctg gtgatactgt tctatgtcgt cacgctcgtg aaaggacctg cggtgctgaa
     2821 ccggccgttg taattgtcat gggtatgcca aaaatctcct cgcaacggcg ccgcgatctt
     2881 cttgtcgcgg gcgcatgcgg ggttttcgtt gcggcgatgg tcggcgccgc ctacgcggct
     2941 gtaccgctct acaactggtt ctgtcgaacc accggctttg gcggcacacc tcaggtcgcc
     3001 accgccgctc cgtctgatat tctgggccgc aagctcaagg tgcgtttcga cgccaacgtc
     3061 gccggcggcc tcccctggcg cttcgagccg gagcagagtt cgatcgaggt caaagtcggc
     3121 gaggtagtga cggtcagcta tcgcgtcgtc aacgaatcgg cgcgcgagac ggtagcaatt
     3181 gcctcctaca acgtctcgcc gcccaccgcc ggtgcgtatt tctcgaaaat caactgtttc
     3241 tgctttaccg atcagcggct caaggctggc gaaacacgcg atatggcggt ggtcttcttc
     3301 gtcgccccgg acatcgtgaa ggattcggag caggatcgtc tcgagactat cacgctctcc
     3361 tacaccatgt atccggcgcg ccaagctgag ccagcgcgag gagacaacgg ggcagcgctt
     3421 gcggccggac gaagctgaaa ctgcgaaaag gaaacgagcg ccgtagctgc tcgccgcgac
     3481 atggagacgc tcaagatggc cgaagctcac gccaagccgc accatgacta ccatctggtc
     3541 gcgccgagcc cttggcctgc ggttggcgcg gtgtcggcat ttgtgacggc attcggcggc
     3601 atcacctgga tgcaccacat gttcgcggcc gcgccctaca tcttcggcgt cggcgtgatc
     3661 ggcatcgcct acacgatgat cgggtggtgg accgacgtcg cccgtgaagc cacctatgag
     3721 ggatatcaca cgcgggtcgt ccagatctcc caccgctacg gcatgattct attcatcgcc
     3781 tccgaggtga tgttcttcgt ggcgtggttc tgggcctatt tcaacagcgc gctgttcccg
     3841 gccgacgtgc agcagctcac gcgcgagcag ctgttcggcg gagtgtggcc gccaaaggga
     3901 atcgagacgt tcgacccctg gcacctgccc ctgctcaaca ccctaatcct gctcacctcc
     3961 ggcacgacgg cgacttgggc ccatcacgcg cttctggaga acgaccggca agggctcaag
     4021 tggggtctga ttctcaccat cgcgcttgga ttggcattca cctgcgttca ggcgtacgag
     4081 tacagccacg ccgggtttaa tttcagtggc aacgtctacg gcgccacatt ctttatggcg
     4141 actggcttcc atggcgcgca tgtgatcatc ggctcgacct ttctgatcgt ctgtctgctt
     4201 cgcgcttatc tcggacactt tacacccacg cagcatctcg gttttgaatt cgccgcctgg
     4261 tattggcatt tcgtcgatgt cgtgtggatc ttcttgtttt cctgcattta cgtgtggggt
     4321 tcgggcggag cgaatgtggc acatgccgcc ggacattagc cacgcgtcag cgcaacatgc
     4381 agcccgtttt atcgatctag ttggctcgcg ccccgagcgt tgaggcggat ccgcctctaa
     4441 aggtggccag ggcggcctag cttctgcgac tggccgacat aggcgctgat gccgggtcga
     4501 ctcgatttag ccgcgccggc attccgattt ggtgtgacgg ccgctgagaa acgagaggtc
     4561 ggctatggcg gggtatgatg cgatcatcat cggcacggga caggctgggc cggctttggc
     4621 gcggcggctg gttgccgcgg actggaaggt cgctgtcatc gagcggaagt ttttcggggg
     4681 tacctgcgtc aacaccggct gtacgccgac caaggccttg gtcgcgagtg cc
//
LOCUS       DATCWM010000319         3000 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_499093, whole genome shotgun sequence.
ACCESSION   DATCWM010000319 DATCWM010000000
VERSION     DATCWM010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3000
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_499093"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            46..771
                     /locus_tag="VIQ50_06065"
     CDS             46..771
                     /locus_tag="VIQ50_06065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9359980.1"
                     /translation="MKTRKHSKTTAAVTIAIAALLTYASASQPLKFDFSDETVGAEPK
                     SFVSVVGVWRIESDGNNKVLVVDGRQWKEGQTAAGIADKARALYGDRYAEFLDRVQAY
                     AYFPYVVAKDVTDFRDGEISVRFEGISGRIDQGAGILFNLKPNGDYLTVRANPLENNL
                     VLWKFEKGKRSSVKWIRNTPTPTRQWHDLKVRIAGAKVAAYLDGKLYLEHILPEPVSG
                     RIGLWSKADSHMYFDDFTVTPAD"
     gene            775..2028
                     /locus_tag="VIQ50_06070"
     CDS             775..2028
                     /locus_tag="VIQ50_06070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9359981.1"
                     /translation="MVQLPHSYRGVLEGLRLAERADVLNLYAARAARGFGDGFAAIIL
                     PAYLLEIGFDPFQIGLVAAAALLGSAATTLAVGFLAPRYPLRTLLLACATLMVLTGIA
                     IPGLQHLVFIALVAFIGTMNPDPGSGVHVPLEQAALAQRASDAERTHIFARYSLIGAI
                     SIAAGALAAGAPDLLVSFGMGRIGGLQAMFYLYAALGLIGALFYSRLPRAEVKETAQQ
                     ATALGPSRRTVYKLAALFSLDAFAGGFTVQSLMALWLFERFDLSLGAASAFFFWSNVL
                     TAFSYPVAARLGTRFGLVNTMVFTHIPSSVCLILAAFSSNLTIVLALLLVRSALSQMD
                     VPTRTSYVMAVVTPAERTAAASVTAVPRSLASSISPAISGALLSTAFAGLPLVVCGVL
                     KIVYDLSLLFSFRHIKPPEEKKGSR"
     gene            2083..>3000
                     /locus_tag="VIQ50_06075"
     CDS             2083..>3000
                     /locus_tag="VIQ50_06075"
                     /inference="COORDINATES: protein motif:HMM:NF022821.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3182 family protein"
                     /protein_id="HEY9359982.1"
                     /translation="MSMVRGVVVVYFSRLGGRLRGDQQILLDADARLLAKLKGYDFGG
                     RHDAARAYSNSLFFVPDDVLLKEEAEALGIRGPEDLYGGVVPHPFVKTKAITHELVGS
                     DAQRPQGWSSAFAEKVGEVALPGYTAFSPGDARWAAKRMLERGPVRLKRPLGASGQGQ
                     TVVTTADQVDRFLEQLDADELATYGLVLEENLRNVRTLSVGQIVLDSFTISYYGTQRR
                     VQDNDGRAIYGGSDLVCLRGGWDALDALPMAPEIRVGVAQAKSYDAWMSEYPSFIASR
                     RNYDVGQGIGADGRRRSGVLESSWRAGGAT"
BASE COUNT          501 a          980 c          933 g          586 t
ORIGIN      
        1 cccgccgcaa atcgctgcac atctgatcaa aaacggaggt cacgcatgaa aacgcgcaaa
       61 cacagtaaga caaccgccgc cgtcaccatc gccatcgccg cgctgctgac atacgcgagc
      121 gcgtcgcaac ccctgaaatt cgacttttcc gacgaaactg tcggcgccga gccgaaatcg
      181 ttcgtgagcg tggtcggcgt ctggcgcatc gagagcgacg gcaacaacaa ggtgctggtg
      241 gtcgacggac ggcagtggaa ggagggccaa accgcagccg gcatcgccga caaggcgcgc
      301 gcgctctatg gcgaccgcta cgccgaattt ctcgatcgag ttcaggccta cgcgtatttc
      361 ccctatgtcg tggccaagga cgtcaccgac ttccgcgacg gcgaaatctc cgtgcgcttc
      421 gaagggattt ccggccgcat cgatcagggc gcggggatcc tgttcaatct caaaccgaac
      481 ggcgactatc tgaccgtgcg cgcaaatccc ctcgagaaca atctcgtact gtggaagttc
      541 gagaaaggaa agcgatcctc ggtcaaatgg attcgcaata cgccgacgcc gacccgccag
      601 tggcatgatc tcaaggtgcg tatcgccggg gcgaaggtcg cggcctatct cgacggcaag
      661 ctttacctgg agcacatcct cccggagccg gtttcagggc gcatcggcct gtggtccaag
      721 gccgacagcc atatgtattt tgacgatttc acggtgacgc cggccgattg atcgatggtc
      781 cagttgccac actcctaccg cggcgtcctc gaaggcttgc gcttggccga acgcgccgac
      841 gttctgaatc tctacgcggc gcgtgcggcg cgcggctttg gcgacggctt tgccgccatc
      901 atcctgcccg cctatctgct cgagatcggg ttcgatccat ttcagatcgg cctggtagcc
      961 gccgccgcgc tgttaggctc ggccgccacc accttggccg tcgggtttct cgctccgcgc
     1021 taccctttgc gcacgctgct gctcgcgtgc gcgaccttga tggtgctgac cggaatcgcg
     1081 atccccggcc tccagcatct cgtcttcatc gccctcgtcg ccttcatcgg cacgatgaat
     1141 ccggaccccg gcagcggcgt gcacgtcccg ctcgaacaag ccgcgctcgc gcagcgggca
     1201 tcggacgcgg agcggacgca cattttcgcg cgctacagtt tgatcggcgc gatctcgatc
     1261 gcagccggcg cgctcgccgc gggcgcgccg gacctgttgg tgtcgttcgg gatgggccgg
     1321 atcggcggcc tgcaggccat gttctacctg tacgcggcgc tcgggctgat cggcgccttg
     1381 ttctactccc gccttccccg cgccgaggtc aaggaaacgg cgcagcaagc caccgcgttg
     1441 ggcccctcgc ggcggaccgt ctacaagctc gcggcgctgt tcagcctgga tgcgtttgcc
     1501 ggcggcttca ccgttcaatc cctcatggcg ctgtggctgt tcgaacggtt cgatctttca
     1561 cttggcgcgg cgagcgcatt cttcttctgg tccaacgttc tcaccgcctt ctcctatccg
     1621 gtggcggcgc ggctcggcac gcgcttcggt ctagtcaaca ccatggtgtt cacgcacatt
     1681 ccctcgagcg tctgccttat ccttgcggcg ttctcgtcga atctcacaat cgtgctggcg
     1741 ctgctactcg tgcgctccgc tctctcccag atggacgtgc cgacgcgcac gtcctacgtg
     1801 atggcggtag tgacacccgc cgagcgcacc gcggcggcca gcgtcaccgc ggtcccgcgc
     1861 agcttggcgt cttcgatcag cccggcgatc tcgggcgcgc tgctctcgac cgcgttcgcg
     1921 ggattgccgc tcgtcgtctg cggtgtgctg aagatcgtct atgacctctc gctgctgttt
     1981 tcgtttcgcc acatcaagcc gccggaggag aaaaaggggt cgcgctgagc ttccgcgctg
     2041 cggggcggtg ctcgctgttc gcaagcaaag cacacaaagt ccatgagcat ggtaaggggt
     2101 gtcgtcgtcg tttacttttc acgcttgggc ggccggcttc gcggcgatca gcaaatcctg
     2161 ctggacgcag acgctcggct cctcgccaaa ctcaagggat atgacttcgg gggacgccac
     2221 gacgctgcgc gcgcctattc caactcgctc ttcttcgtgc cggacgacgt gctccttaaa
     2281 gaagaggccg aagctctcgg catccgtggc ccggaggacc tttatggcgg cgtcgtccca
     2341 catcctttcg tgaagacaaa ggccatcacc cacgagctcg tcggcagcga cgcgcagcgg
     2401 ccgcagggtt ggtccagcgc tttcgccgag aaggtgggcg aggtggcgtt gccgggctac
     2461 acggctttca gccccggtga tgcgcgatgg gcggcgaaac gcatgctgga gcgcggcccc
     2521 gtgcgactga aacggccgct tggtgcctcg gggcaaggtc agaccgttgt tacgacggca
     2581 gatcaggttg accgattcct cgagcagctt gatgcggacg aactggccac ctatggcttg
     2641 gtgctggaag aaaacctgcg caacgttcgc acgctgagcg tcggccaaat cgtgctcgat
     2701 agtttcacga tcagctacta cggcacgcaa agaagggtgc aggacaatga cgggcgggcg
     2761 atttacggcg gttccgacct tgtctgcttg cgcggcggct gggatgcgct cgatgctctt
     2821 cccatggctc ccgagatccg tgtcggagtg gctcaagcca aatcgtatga cgcgtggatg
     2881 agcgagtatc ccagcttcat cgcctcgcgg cgcaattacg acgtcggaca aggcatcggc
     2941 gcggacggtc gccggcgatc cggggtgctc gaatcctcat ggcgtgccgg cggggcgacc
//
LOCUS       DATCWM010000320         2883 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_477476, whole genome shotgun sequence.
ACCESSION   DATCWM010000320 DATCWM010000000
VERSION     DATCWM010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2883)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2883)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2883
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_477476"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(118..1494)
                     /locus_tag="VIQ50_06080"
     CDS             complement(118..1494)
                     /locus_tag="VIQ50_06080"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEY9359983.1"
                     /translation="MRLNSLALRLFFSATTWTVVILVVTGVVLSSIYRTGVERAFDRR
                     LGVYLRSLVADVATPEENAGKFPQSLGEPLFDLPLSGWYWQVTRLDVPTRDVRSSRSL
                     WDASLPQLGDAGAASAPGGTREGYAEGPEGQRLRIVEQTIDLGEEGRYLVAVAGDPTE
                     IDEEIHAFDSALVLTFGVLAIVLLLTTTFQVRFGLAPLKRISEGLAAIRSGGAERLEG
                     AFPVEIAPLARETNALIDANREIVARARTHVGNLAHALKTPISVMLNEATTHGADPLA
                     LKVREQTEIMRDQVTRHLERARLAARVAAIGTVTEVGPVLSALARTMEKIHHHRGIAV
                     DVNASENIRFRGEQQDLEEMVGNLVDNAFKWAQSRVVVEAVSEKVDARDDHRTIRIVV
                     DDDGPGLSPQQREQVARRGRRLDETKPGSGLGLSIVVELANLYGGGLTLGTAPIGGLR
                     AELMLPGG"
     gene            complement(1484..2155)
                     /locus_tag="VIQ50_06085"
     CDS             complement(1484..2155)
                     /locus_tag="VIQ50_06085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY9359984.1"
                     /translation="MRLLVIEDDPDLNRQLATALIDAGYVVDRAFDGEEGHFLGESEP
                     YDAVILDIGLPKMDGISVLEAWRRAGRAMPVLILTARDRWSDKVQGFDAGADDYVAKP
                     FHLEEVLARIRALLRRSAGHAKSELNCGAVRLDTRTGRVTVNGNPVKLTSHEYRLLAY
                     LMHHTGRVVSRSELVEHLYDQDFDRDSNTIEVFVGRVRKKVGVDVIQTVRGLGYMLAS
                     PGNAS"
     gene            2456..>2883
                     /locus_tag="VIQ50_06090"
     CDS             2456..>2883
                     /locus_tag="VIQ50_06090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011442047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY9359985.1"
                     /translation="MSDDFILQTEDLTKEFAGFVAVSGVNLRVARGSIHALIGPNGAG
                     KTTCFNLLTKFMSPSRGRIVYKGRDITPLPPAGVARLGLVRSFQISAVFPHLTVLENV
                     RVALQRQRGSSFDFWRSKRVLDVFNERAMALIADVGFSSFA"
BASE COUNT          516 a          938 c          952 g          477 t
ORIGIN      
        1 gcgcttcgaa tgggcaatcg tgcgacccac gacagtaccg gaggcgggca ggaaaatggg
       61 tgcagcgtgg agacctgcgg cgagcaggcc aaacaggccg cgcaccgtaa gccccgctca
      121 cccgccgggc agcatcaatt ctgcgcgcaa gccgccgatc ggcgcggtgc cgagagtaag
      181 gcccccgcca taaaggttcg cgagctcgac cacgatcgaa aggcctagtc cggagcccgg
      241 cttggtctcg tcgagacggc ggccgcggcg ggccacctgc tcgcgctgct gcggcgagag
      301 cccgggtccg tcgtcgtcga ccacgatgcg tatggtgcgg tgatcatccc gcgcatcgac
      361 cttctccgaa accgcttcga ccaccactcg cgactgcgcc catttgaaag cattgtccac
      421 gagattgccg accatctcct cgagatcttg ctgctcgcca cggaagcgga tgttctccga
      481 cgcgttcaca tcgacggcga tgccgcgatg gtggtggatc ttctccatcg tgcgcgcgag
      541 cgcgctgagc acgggtccga cctcggtcac ggtgccaatc gccgcgacgc gggcggcgag
      601 gcgggcgcgc tcgaggtggc gtgtgacctg gtcgcgcatg atctcggtct gctcgcgcac
      661 cttcagcgca agcgggtcgg cgccgtgggt cgtggcctcg ttgagcatga ccgagatcgg
      721 cgtcttcaac gcgtgtgcga gattgccgac atgggtgcgc gcgcgggcga caatctcgcg
      781 attggcatcg atgagcgcgt tcgtttcgcg cgcgagcggc gcgatctcga ccggaaaggc
      841 gccctcgagc cgttccgccc cgcccgagcg gatggcggcc agaccttcgg agatgcgttt
      901 gagcggcgcc aggccgaaac gcacctggaa cgtggtggtc agcaacaaca cgatcgcgag
      961 cactccaaag gtgaggacga gcgcgctgtc gaaggcgtgt atttcctcgt cgatctccgt
     1021 cgggtcgccg gccaccgcaa cgaggtagcg tccttcctcg ccaagatcga tggtttgctc
     1081 aacgatgcgc aaccgctgcc cctcgggtcc ttccgcgtaa ccctcacgcg tgccgccggg
     1141 cgccgacgcg gcgccggcat cgcccagctg cggcaagctt gcgtcccaca acgagcggga
     1201 ggaacgcacg tcgcgtgtcg gcacatcgag ccgcgtcact tgccagtacc agccggagag
     1261 cggcagatcg aacagcggct cgccgagcga ttggggaaat tttccggcat tctcctccgg
     1321 cgttgcgacg tcggccacca ggctgcgcag atagacgccc agccttcgat cgaatgcgcg
     1381 ctccacaccg gtgcgataga tcgaggaaag cacgacgccg gtgacgacga gaatcactac
     1441 ggtccaagtc gttgccgaga agaacagtcg tagcgcgagc gaattaagac gcattgcccg
     1501 gggaagcgag catatagccg agcccgcgca cggtctggat gacgtcgacg ccgaccttct
     1561 tgcgcacgcg accgacgaag acctcgatgg tattggaatc gcgatcgaaa tcctgatcgt
     1621 agagatgctc gaccagctcg ctgcgcgaga ccacgcggcc ggtatgatgc atgagatagg
     1681 cgagcaggcg atattcgtgc gaggtgagct tgaccggatt cccgttgacc gtcacgcggc
     1741 cggtgcgggt atcgaggcgc acggcgccgc aattgagctc gctcttggcg tggccggccg
     1801 aacggcgcaa cagcgcgcgg atgcgcgcca gcacctcctc gagatggaag ggcttggcga
     1861 catagtcgtc ggcaccggcg tcgaaaccct ggaccttatc gctccagcgg tcgcgcgcgg
     1921 tgaggatgag gaccggcatg gcccggccgg cgcggcgcca ggcctcgagc accgagatgc
     1981 cgtccatctt cggcagacca atgtcgagga tgaccgcatc gtagggctcg ctctcgccga
     2041 ggaagtggcc ctcttcgccg tcgaacgcac gatcgaccac atagcctgcg tcgatgagcg
     2101 cggtcgcaag ctgccggttg aggtcagggt cgtcctcgat gacgaggagg cgcaaactca
     2161 gtgctcccag cgatgcggcc ggccggttcg tccatgcgga atcggcgctc gcagcattac
     2221 tgtgccatta cataggaatg ggggaaaggc ggagaaaggc cactagagac tacgcaggcg
     2281 ccgcggccgc gcgctgcggc agccggcctt gcgcgtgtct cgcagcgcca gcctcgcatt
     2341 cgtcatttcg tccgtgatgc gcgccgaaga ataattgcgc ccgcaactgc cgcgccgcgt
     2401 gttgccggac gcgcaggccg tgctaacact atgcgaggag caaggaccga gccgcgtgag
     2461 cgacgatttc atcctccaaa ccgaggatct caccaaggaa ttcgccggat tcgtcgcggt
     2521 cagcggggtc aatctgcgcg ttgcgcgcgg ttcgattcac gcgctgatcg gccccaacgg
     2581 cgcgggcaag acgacctgtt tcaacctcct gaccaagttc atgagcccga gccggggacg
     2641 catcgtctac aaagggcgcg acatcacgcc gctcccaccg gcgggggtgg cgcggctcgg
     2701 cttggtgcgc tcgtttcaaa tctccgcagt tttcccgcac ctcaccgtgc tcgaaaatgt
     2761 gcgggtcgcg ctgcagcggc aacgcggatc gtcgttcgat ttctggcgct caaaacgcgt
     2821 ccttgacgtc ttcaacgaac gggcgatggc gctcattgcc gacgtcggct tctcctcatt
     2881 cgc
//
LOCUS       DATCWM010000321         4182 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_34812, whole genome shotgun sequence.
ACCESSION   DATCWM010000321 DATCWM010000000
VERSION     DATCWM010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4182
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34812"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..413
                     /locus_tag="VIQ50_06095"
     CDS             <1..413
                     /locus_tag="VIQ50_06095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pyridoxal-5'-phosphate-dependent protein subunit
                     beta"
                     /protein_id="HEY9359986.1"
                     /translation="LANIVAAIKVAKHLDFGADDVVMTVATDSALLYASERRSFLARR
                     YGDGFDEVNAGEVFSRHLEGVEDDHVLELTHFDRKRIFNLGYFTWVEQQGVSIDDFEQ
                     RRDQRFWRSLVDGIPLWDRLVDDFNAEVGVGRGR"
     gene            419..1405
                     /locus_tag="VIQ50_06100"
     CDS             419..1405
                     /locus_tag="VIQ50_06100"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HEY9359987.1"
                     /translation="MAESNDKSRAGTPQSYLELREDLLRRDRSLRDKVVSLEEATSFV
                     RDGDSVGIGGSTMSRTPMGMVWALARARRKRLTCSRSIVSSDGDLLFASGICDHIVTS
                     WFSQGILWGVSKVMRHHVETGKARFDEWSHMAMGMRFRAGAMGIPFMPIRSMLGSDVR
                     KQRPEAREIDCPFTGEKLLLVPALNPDVALIHVQRCDAYGNAQIDGLQFMDIDLAMAA
                     NKVILTTERIISNDQIRRAPDQTKIPFFAVDAVVELPFGCAPHECYGVYEPMLRHMEY
                     YVGLVNGDPVKGMRDYMDRFVYGPKSWSEFLALIGIEELLEAARAGESIYDA"
     gene            1398..2168
                     /locus_tag="VIQ50_06105"
     CDS             1398..2168
                     /locus_tag="VIQ50_06105"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008593143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HEY9359988.1"
                     /translation="MLKKHNYSAAELLTILSARQLSDGQVVFAGVGIPLLAATLAQRL
                     RCPGLTILFEGGVIGAFIEPGKLPPSTNDQRCTKRANMVLGSAEVLLLLQRGYVDVGF
                     MGGAQVDQYGNLNSSFIGDPARPKTRLPGTGGGNDIASLAQMIVAMKHEKRRFVEHVD
                     FITSPGYLRGGETRRASGLLAGGMFRVVTDLAVFGFEAEKRRMQVISLNPGVSREALQ
                     DNTGFALDFAPHLGVTEPPTDQELELLRELDPERLYTA"
     gene            2400..3356
                     /locus_tag="VIQ50_06110"
     CDS             2400..3356
                     /locus_tag="VIQ50_06110"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013949149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03619 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HEY9359989.1"
                     /translation="MARLDRTFGIAVPNFTAYPQMPDIKALVEYGVRMEQLGFDSLWV
                     WDHILLGVEPNFPIIESLTLLTAIAARTSKIKLGTGILVLPMRNPVILAKQLACMDLL
                     SDGRLLMGMASGWYRREFNAIGVPFEQRGKIMDENLDILKRFWTEHTVSGKFTRYDIP
                     AGVMYPKPVQKPYPPILIGGYVDRVLKRAAVDGDGWLTYFYRPDSFAKSWDKIRGFAK
                     EAGKDPDKLLNASQLPIYVGKSRQAVESQMMEWLTKEWDFASWSESTKDSAVMGTVDE
                     CVEQLKAHVAVGTQKIIFVPYKYEAEQIELIAREIIPRLKAK"
     gene            3626..>4182
                     /locus_tag="VIQ50_06115"
     CDS             3626..>4182
                     /locus_tag="VIQ50_06115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359990.1"
                     /translation="MKQYASTAALAAIVFAAAVTTAPAQETIKVGVIQPLTGAFAASG
                     NYVANGAKIAADEINAKGGVLGKKLELVIEDNKSNPTEAAAVAEKLIVRDKVPVMMGA
                     WGSGFTLAIMPKLMEYKVPMLVETSSAGKITTSGNPYIFRISPPSSVEAVAFAKIVDK
                     LKIGKADFLVVNNDWGRGAADDFGK"
BASE COUNT          817 a         1263 c         1336 g          766 t
ORIGIN      
        1 ggctggcgaa tatcgtcgcc gccataaagg tcgccaagca tcttgatttc ggcgccgacg
       61 acgtggtgat gacggtggcg accgacagtg cgctccttta cgccagcgag cggcgcagct
      121 ttctggcgcg gcgctacggc gacgggttcg acgaggtcaa tgccggcgaa gtcttcagcc
      181 gccatttgga aggagtcgag gacgatcacg tcctcgagct gacccatttc gaccgcaagc
      241 ggattttcaa cctcgggtac ttcacctggg tggagcagca gggcgtgagc atcgacgatt
      301 tcgaacagcg aagggaccag cggttctggc gcagtctcgt ggacggcata ccgctatggg
      361 atcgcttggt cgacgacttc aacgcggagg tcggcgtcgg gcgcgggcgg tgatcggcat
      421 ggcggagagc aacgacaaat cgcgcgccgg cacgccccag agctatctgg agctgcgcga
      481 ggatctgttg cgccgcgacc gcagtttgcg cgacaaggtc gtttcgctcg aagaggcgac
      541 ctcgttcgtg cgcgacggag attcggtcgg catcgggggc agtaccatgt cgcgcacccc
      601 gatgggcatg gtctgggcgc tggcgcgcgc gcgccgcaag cgtctcacct gctcgcgcag
      661 catcgtctcc agcgatggcg acctcttgtt cgcgtccggc atctgcgacc acattgtgac
      721 gagttggttc agccagggaa ttctgtgggg cgtgtcgaag gtgatgcgcc atcacgtgga
      781 gaccgggaag gcgcgattcg acgaatggag ccacatggcc atgggcatgc gttttcgtgc
      841 cggcgccatg ggcattccct tcatgccgat tcgctcgatg ctggggtcgg acgtccgcaa
      901 gcagcgcccc gaagcgaggg agatcgattg cccgttcacc ggcgagaagc tgctcttggt
      961 tcccgcgctc aatcccgatg tcgcgttgat ccacgtccag cgctgcgacg cctatggcaa
     1021 cgcgcaaatc gacggcctgc agttcatgga catcgatctg gcgatggccg ccaacaaggt
     1081 catcctgacc accgagcgca tcatctctaa cgatcagatc cgacgcgcgc cggatcagac
     1141 caagatacct ttctttgccg tcgatgccgt ggtcgaattg ccgttcgggt gcgccccgca
     1201 cgaatgctac ggcgtctacg agccgatgtt gcgccacatg gaatactacg tgggcctggt
     1261 gaacggcgat ccggtgaaag gaatgcggga ctacatggat cggttcgtgt acggaccgaa
     1321 atcgtggagc gagtttctcg ccttgattgg catcgaggag ttgctcgagg cggcgcgcgc
     1381 cggggagagc atttacgatg cttaagaagc acaactacag cgcggcggag ctgctcacta
     1441 ttctgagcgc gcggcaactc agcgacgggc aggtggtatt tgccggtgtg ggcatcccac
     1501 tcttggccgc cacccttgcg cagcggctgc gttgtcccgg cctgacgatc ctgttcgaag
     1561 gcggggtgat cggcgccttc atcgagccgg gaaagcttcc cccttcgacc aacgatcagc
     1621 gctgcaccaa gcgcgccaac atggtgctcg gcagcgccga agtgctgctg ctgcttcagc
     1681 gcggctacgt cgacgtcgga ttcatgggcg gcgcgcaggt cgaccagtac ggcaatttga
     1741 acagctcgtt catcggcgat ccggcgcggc ccaagacccg attgccgggg acgggcggcg
     1801 gcaacgacat cgcctcgctc gcgcaaatga tcgtggcgat gaagcacgag aagcgccgat
     1861 tcgtcgagca cgtcgatttc atcaccagtc ccgggtacct gcgcgggggc gagacgcggc
     1921 gtgccagcgg ccttctcgcc ggcggcatgt tccgggtggt gaccgatctc gcggtgttcg
     1981 gattcgaagc cgagaagcgg cgcatgcagg tgatctcgct caatccgggc gtcagccggg
     2041 aagcgcttca agacaacacc gggtttgccc tcgacttcgc gccccatctc ggcgtcaccg
     2101 agccgcccac cgatcaggag ctcgagctgt tgcgcgagct tgatcccgaa cggctctaca
     2161 cggcgtagag aaggctttat gcatcaacgc gggtggcaca ctcggtctgc tccctctccc
     2221 atagggagag gggtggggtg aggggttatg gtccatcgat ggttctgtaa ccccctcacc
     2281 ccaaccctct ccccaatcgg ggagagggag cgcaccgaga tcgccgtgcc agtgtcgtca
     2341 atggcgaaac cgtttagcgg tccgcaaatt tcgaaggttt gacagtagag gagtttgtaa
     2401 tggcgcgttt ggatcggacg ttcggcatcg cggtgccaaa tttcaccgcc tatccgcaga
     2461 tgccggacat caaggccctg gtcgagtacg gcgtgcgaat ggaacagctc ggcttcgatt
     2521 cgctttgggt gtgggatcat atcctgctcg gcgtcgagcc gaactttccc atcatcgaat
     2581 cgttgacgct gctcacggcc attgccgcgc gcaccagcaa gatcaagctc ggaaccggca
     2641 ttctcgtgtt gccaatgcgc aatccggtga ttctcgccaa gcagctggcg tgcatggatc
     2701 tcttatcgga cggccggctg ctgatgggca tggcatcggg ctggtatcgg cgcgaattca
     2761 acgccatcgg cgtgccgttc gagcagcgcg gcaagatcat ggacgagaat ctcgacatcc
     2821 tcaaacgctt ctggaccgag catacggtga gcggcaagtt cacccgctac gacatccccg
     2881 ccggcgtcat gtatcccaag ccggtgcaga aaccatatcc gccgatcctg atcggcggat
     2941 atgtcgatcg cgtgctcaag cgcgcggccg tcgacggcga cggctggctc acctatttct
     3001 accggccgga cagtttcgcc aaatcgtggg acaagattcg cggctttgcc aaagaggcgg
     3061 gaaaagaccc ggacaagctt ctcaatgctt cgcagctgcc gatctacgtc ggcaagtccc
     3121 gccaggcggt cgagagccag atgatggaat ggctcaccaa ggaatgggat ttcgcgtctt
     3181 ggagcgaatc gacgaaggac agcgccgtca tgggaaccgt cgacgaatgc gtcgagcagc
     3241 tcaaggcgca cgtggccgtc ggaacgcaaa agatcatctt cgttccctac aagtacgagg
     3301 cggagcagat cgagcttatt gcgcgcgaga tcattccgcg gctgaaggcg aaatgacgca
     3361 cctcgcacgc cacggcgatc atgaagaagc gtgccgccgc gttaacttgg cgcgaaagca
     3421 tgcaactggc cgcgccgtgt gggcgcaatt tcggcttgcc cacgcgttcg ctcctcatgt
     3481 tatcattcgc ccagaagcgc ggacggccgg atgcgaaggg ccgtgcaagg gctcgacgta
     3541 ttttcccata ggatctgacg cccactcccg cacaagtagc tacgcgatga tcggctgccg
     3601 ccgctcgcac acaggaggga caaacatgaa gcaatacgca agcacggccg cgctcgcggc
     3661 aatcgttttt gccgccgccg tgacaacggc gcccgcgcaa gagaccatca aagtcggcgt
     3721 cattcagccg ctgaccgggg cattcgcggc gtcgggaaat tacgtcgcca acggcgccaa
     3781 aattgccgcc gacgagatca acgccaaggg cggcgtgctc ggcaagaaat tggagctcgt
     3841 aatcgaggac aacaagagca acccgaccga agccgcggcg gtggcggaga agctcatcgt
     3901 acgcgacaag gtgccggtga tgatgggcgc gtggggctcg ggcttcacgc tcgcgatcat
     3961 gccgaagctc atggaataca aggtaccgat gctggtcgag acctcatcgg ccggcaagat
     4021 caccacttcg ggcaatccct acatcttccg catctcgccg ccatcgtcgg tcgaagcggt
     4081 ggcgttcgcc aagatcgtcg acaagctcaa gatcggcaaa gccgatttcc tcgtcgtgaa
     4141 caacgattgg ggccgcggcg cggccgacga cttcggcaag at
//
LOCUS       DATCWM010000322         2158 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_390962, whole genome shotgun sequence.
ACCESSION   DATCWM010000322 DATCWM010000000
VERSION     DATCWM010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2158
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_390962"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..924)
                     /locus_tag="VIQ50_06120"
     CDS             complement(<1..924)
                     /locus_tag="VIQ50_06120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEY9359991.1"
                     /translation="MTTVADQFAETLAMAGIKRIYGIVGDSLNGLTDSIRRQGKIEWI
                     HVRHEEVAAFAAGAEAHLTGELAVCAGSCGPGNLHLINGLFDCHRSRVPVLGIAAQIP
                     SAEIGSGYFQETHPETLFQECSHYCELVSAASQMPRVLEVAIRQAVGKRGVSVLVLPG
                     DVALQGAAEAPPAPPGGLLPPAPVVTPSRPDLDRLAALLNSDERITILCGSGCQGAHD
                     ELIALGERLKAPMVHALRGKEHVEWDNPYDVGMTGLIGFSSGYYAMLDCGVLLMLGTD
                     FPYRQFYPQGNGVRIAQVDIRAENIGRRAAVD"
     gene            1611..2033
                     /locus_tag="VIQ50_06125"
     CDS             1611..2033
                     /locus_tag="VIQ50_06125"
                     /EC_number="1.11.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008140729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA];
                     GO_process: GO:0006972 - hyperosmotic response [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0033194 - response to hydroperoxide
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEY9359992.1"
                     /translation="MIRKAKAVWRGTGRAGNGQLSTDSGILDETPYSFKTRFENEKGT
                     NPEELIAAAHAGCFTMALAFQLQGGGFTATELSTEAAVTLEPEGQGFRITRSALTLRA
                     AVPNLDQATFARMAGEAEKNCPVSKVLNAEITLDAKLA"
BASE COUNT          382 a          714 c          685 g          377 t
ORIGIN      
        1 atcgacggcg gcgcggcggc cgatgttctc cgcccggatg tccacttgcg cgatgcgaac
       61 gccgtttccc tgcgggtaga actgacgata agggaagtcg gtcccgagca tcagcaagac
      121 gccgcagtcg agcatggcgt agtagccgga ggagaagccg atgagtccgg tcataccgac
      181 gtcatacgga ttgtcccact cgacgtgctc cttgccgcgc aatgcgtgca ccatcggcgc
      241 cttgaggcgc tcgcccagcg cgatgagctc gtcgtgcgcg ccttggcatc cggagccgca
      301 caggatggtg atgcgctcgt cgctgttgag cagcgccgca agccgatcga gatcgggccg
      361 cgacggcgtg acgacgggcg cgggcggcaa gagcccgccc ggtggggccg gcggcgcttc
      421 ggctgcaccc tgcagcgcca cgtcgccggg caacaccagc accgacacgc cgcgcttgcc
      481 gaccgcctgg cggatcgcga cctccagcac acgcggcatc tggctggcgg ccgagacgag
      541 ctcgcagtag tggctgcact cctggaacag cgtttccgga tgcgtttcct ggaaatagcc
      601 gctgccaatc tcggccgagg ggatctgcgc ggcgatgccg agtacaggga cgcgcgagcg
      661 gtggcaatcg aatagcccgt tgatgaggtg cagattgccc ggcccgcagc ttccggcgca
      721 gaccgcgagc tcgccggtga gatgcgcctc ggcgccggcc gcgaatgcag cgacctcctc
      781 gtgcctgaca tggatccatt cgatctttcc ttggcggcgt atggagtctg tcaggccgtt
      841 gaggctatcg cctacgatcc cgtaaatccg cttgatgccg gccatcgcca gcgtctcggc
      901 gaattgatct gcaaccgtcg tcatgcccgg ctcccgtttt cccggtggac ttgcggatgt
      961 gtgcggagcg ccgatcccag cgcgcggtct tttttgccca gattgttctt cgattgcgct
     1021 gtcggcgagc ggcccttgcc ccatttggaa ccgaggtccg tcacccgcgg tcggcgatca
     1081 ttcgcctaat attggcgctc gcgccggctc cggtcgagcc ctttccgggc caggttttgg
     1141 tgcagttcaa gatgccttag cgcgttcaac gagcaccgac atggcaaacg tgcagtgcca
     1201 gaggtaacac gcgtaactgc agtacgacag gcgtgtcgag agctctcgca gatagctttc
     1261 accgattggc tcgcagcaca atgcgcagga actttcagga cgtggcctcc taccgttgac
     1321 caggacgaac ttcatgtaag cctcccgcgc tcgcgggttg tggatccttt gcagcacaca
     1381 agatctaaga cccccgcggc aacgcgtttg ccgccacttg ccgcaaatgg ccggttcttg
     1441 cctcgacctt ggatcaagga accgacaccg tgaacggccc ccgcacgatt cgccaatgca
     1501 tcgcggaaag ttgatcggcg ttggcgtgcg ctcgtcttgg aaatcggcat acaggagtgc
     1561 ggcgccttca cgcgcgctgt gaacggagca ctcaccaggg agacgtcccc atgatccgca
     1621 aggcgaaagc agtgtggcgc ggcaccggcc gcgccggaaa cggccagctc tctaccgact
     1681 ccggcattct cgacgagacc ccctactcgt tcaaaacgcg cttcgagaac gagaagggca
     1741 ccaatcccga ggagctcatc gccgccgcgc atgccggctg tttcaccatg gcgctggcgt
     1801 tccagctgca aggcggcggc ttcactgcga ccgagctcag caccgaggcc gccgtcacgc
     1861 tggagccgga aggccaaggc tttcgcatca cccgctcggc gttgacgctg cgcgccgcgg
     1921 tgccgaacct ggaccaggcc acgttcgcgc gcatggccgg cgaagccgag aagaactgcc
     1981 cggtctccaa ggtcctcaac gcggaaatca cgctcgacgc caaactagcg tgaatcgcac
     2041 gctttgctcc gtgctgccgt ttgattgaga taaacggcgg acggcatcca acggcggcgt
     2101 tttacggccg gcgcgccgac gcgcgccaca ggctcttcgg catcaggcaa tgaacggc
//
LOCUS       DATCWM010000323         3444 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_202369, whole genome shotgun sequence.
ACCESSION   DATCWM010000323 DATCWM010000000
VERSION     DATCWM010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3444
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_202369"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..381
                     /locus_tag="VIQ50_06130"
     CDS             <1..381
                     /locus_tag="VIQ50_06130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017404459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEY9359993.1"
                     /translation="DFCMGVTALWTAVHYRIPLLVVVCNNRSFFNDELHQERVARIRN
                     RPPENRWIGQRISDPDIDCAALGTAQGAMGFPPATKTADLMPTFARAIAAVEAGQVAV
                     VDVRVEPGYSAVATAAMLRGTEKA"
     gene            complement(436..1425)
                     /locus_tag="VIQ50_06135"
     CDS             complement(436..1425)
                     /locus_tag="VIQ50_06135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018065872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9359994.1"
                     /translation="MSKLRLSVAVGNYDRVRPLMDGAVQIDGVDPVFMNLPPEEIFFR
                     AFRNVDFDICELSMSSFTVKTAERNCPYVGVPAFVSRAFRHNSIYVRRDRVKSPADLK
                     GRRVGLPEYQLTACVWARIILEDDHGVRPSDVVWVRGGIEHPGRPEKIAIALPADVRM
                     EDAPPDVTISQLLERGEIDGFIAPRAPSLAGKMNPNIGWLFPDPVAAGRDYFKRTGIF
                     PIMHITGIRRELVEAHPWLPAAVFKAFQQAKATCLAALEDTAASKVTLPFVEEQLRAA
                     REFMGHDFWSYGLSPNRKELEIFLRHHHAQGLSSRPVSPEELFHPSTHASFAI"
     gene            complement(1484..3322)
                     /gene="recJ"
                     /locus_tag="VIQ50_06140"
     CDS             complement(1484..3322)
                     /gene="recJ"
                     /locus_tag="VIQ50_06140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008297 - single-stranded DNA
                     exodeoxyribonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HEY9359995.1"
                     /translation="MTIALTAPIVTKRRFFLGVERSACGRAWCDRLDERGAARALAIA
                     QRYADMPELLARILAGRGVELDEVPSFLDPTVRALMPDPHTLADMRIAAGRLTEAIIR
                     GETVAIFGDYDVDGATSAAVLGRYLRHCGLHALIHIPDRLFEGYGPNAEAVRALAARG
                     ASLLVAVDCGTTSHEPLLEARKLGLDVIVIDHHQADERLPAAVAVVNPNRLDDLSSLG
                     HLAAVGLVFMTVVAVNRELRLRGFWTQERPEPDLLGFLDLVALGTIADVVALRGLNRA
                     FVAKGLIAMRRRDNPGLTALMDVARLGGPPEPWHLGFLLGPRINAGGRIGRAALGVEL
                     LMHEDPSECARLAGELDRLNRERQGIELATLAQAEAEAMAALGVEEKGAVVVTAADGW
                     HPGVVGLVAARLRERFGRPAFAIALEPGGIGTGSGRSITGVDLGRAVRHAVSTGLLIK
                     GGGHAMAAGVTLQRDRLNAFRAYLEDALAAAVEAARREDVLLIDAAVTAAAATNETVA
                     TIARAGPFGAGNPEPIIAFPAHTLVYADEVGQSHMRVRLRAGDGSILNAIAFRAAGQK
                     LGRALAQSRGQCVHAAGTLCLDRWNGIERAQLRLIDVASADGSLIG"
     gene            complement(3343..>3444)
                     /locus_tag="VIQ50_06145"
     CDS             complement(3343..>3444)
                     /locus_tag="VIQ50_06145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015929848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY9359996.1"
                     /translation="RVYWLTQESNAVARALYDKLAERSGFIQYRKLF"
BASE COUNT          613 a         1157 c         1140 g          534 t
ORIGIN      
        1 gacttctgca tgggcgtgac cgcgctgtgg accgcggtgc actaccgaat tccgctcctc
       61 gtggtggtct gcaacaatcg ctcgttcttc aacgacgagt tgcaccagga gcgcgtcgcc
      121 cgcattcgca atcggccgcc ggagaaccgc tggatcggac agcgcatttc cgatcccgac
      181 atcgactgtg ccgcgttggg gactgcgcaa ggcgcgatgg gatttcctcc ggcgaccaag
      241 accgccgatc tcatgccgac attcgccagg gcgattgccg cggtcgaagc gggccaggtg
      301 gcggtggtcg acgtgcgggt tgagcccggc tattccgccg tcgctaccgc ggcgatgctg
      361 cgcggaaccg agaaggcctg agaccgcgcg ccgccgcaaa accgaaatcg gcgaggcccc
      421 gcggcgccgt gaaagctaaa tcgcgaagct cgcgtgggtc gagggatgga acagctcctc
      481 cggcgacacc ggtcgggacg acagtccctg cgcgtgatga tggcgcagga agatctcgag
      541 ctccttgcga ttgggggaaa gcccgtacga ccaaaagtca tggcccatga attcacgcgc
      601 tgcgcgcagc tgctcctcca cgaacggcag cgttaccttg ctcgcggcgg tgtcctcgag
      661 cgcggcgaga cacgtcgcct tcgcctgttg gaatgctttg aagaccgccg ccggcagcca
      721 cggatgcgcc tcgaccaact cgcgccggat gccggtgata tgcatgatcg ggaaaatacc
      781 ggtgcgcttg aaatagtcgc gacccgcggc gaccggatcg ggaaagagcc agccgatatt
      841 gggattcatc ttcccggcaa ggctcggcgc gcgcggcgcg atgaagccgt cgatctcgcc
      901 gcgttccaat aattgagaga tggtaacgtc cggcggcgca tcttccatgc gcacgtcggc
      961 cggaagggca atggcgattt tctccggccg gccgggatgc tcgatgcccc cgcgcaccca
     1021 gacgacgtcg gacggtctca cgccgtgatc atcctccagg atgatacgcg cccacacgca
     1081 ggccgtgagc tgatattccg gcagcccgac gcgcctgccc ttgagatcgg cgggcgactt
     1141 gacgcggtca cggcgcacgt agatcgagtt gtgacggaac gcccgcgaga cgaatgccgg
     1201 cacccccaca tagggacaat tgcgctcggc ggtcttcacc gtgaagctcg acatcgacaa
     1261 ttcgcagatg tcgaaatcca cgttgcggaa ggcgcgaaaa aagatttcct ccggcggcaa
     1321 gttcatgaac accggatcga cgccatcgat ctgaaccgcg ccgtccatca gcggacgcac
     1381 ccggtcgtaa ttgccgaccg cgaccgacag cctaagtttc gacatgcttg gcactctcgt
     1441 cggggtcatg ccccgcgcca gcgggacatt ccgatggcga ccgtcaccct atcaggctcc
     1501 catcagccga tgccacatcg atgagccgca actgcgcccg ctcgatgccg ttccagcggt
     1561 cgaggcacaa tgtgccggcc gcatgcacgc actgcccgcg cgactgcgcg agcgcgcgcc
     1621 caagcttttg tccggcggcg cgaaaagcga tggcgttgag gatcgagccg tcgccggcgc
     1681 gcaatcgcac acgcatatgc gactgtccca cctcgtcggc atagaccagg gtgtgcgccg
     1741 gaaatgcaat gatcggctcg gggttgcccg cgccgaaggg tcctgcgcgg gcgatcgtcg
     1801 ccacggtctc gttggtcgcg gccgcggcgg taaccgccgc gtcgatcaac aacacatctt
     1861 ctcgccgtgc ggcctcgacg gcggccgcga gcgcgtcctc gagataggcg cggaaggcgt
     1921 tgagtcgatc cctttgcagc gtaacgcccg ccgccatggc atggccgccg cctttgatga
     1981 ggagcccggt gctcacggcg tggcgcacgg cgcggccgag gtcgacgccg gtgatcgaac
     2041 gcccggagcc ggtgccgatg ccgcccggct cgagcgcgat ggcgaaggca ggccgtccaa
     2101 atcgctcccg caggcgcgcg gcgacgagcc caaccacgcc cggatgccag ccatcggcgg
     2161 cggtcacgac gacggcgccc ttctcctcca caccgagcgc agccatggcc tcggcctcgg
     2221 cctgcgccag cgtggcaagt tcgatgcctt gacgctcgcg gttgagacgg tcgagctcgc
     2281 cggcgaggcg cgcgcattcg gacgggtcct catgcatgag cagctcgaca ccgagcgcgg
     2341 ctcgaccgat gcggccgccg gcattgatgc gcggcccgag cagaaatccg agatgccaag
     2401 gctcgggcgg gccgccgagc cgcgcgacat ccatcaaggc ggtaaggccg ggattgtccc
     2461 gccgccgcat tgcgatcagg cccttggcga cgaacgcgcg gttcagccct ctgagcgcca
     2521 ctacatcggc gatcgttccg agcgcgacca gatcgaggaa gccaaggagg tccggctccg
     2581 gccgctcttg cgtccagaac ccgcgcaagc gtagttcccg gttgaccgcc accacggtca
     2641 tgaacacgag gccgacggcg gcgagatggc cgaggctcga gagatcgtcg agccggttgg
     2701 gattgaccac cgccaccgcc gcgggcagcc gttcgtcggc ctggtgatga tcgatcacga
     2761 tcacgtccaa gccgagcttg cgcgcttcaa gcagtggctc gtggctggtg gttccgcaat
     2821 cgaccgcaac gagaaggctc gcccctcgcg cggcgagggc gcggaccgct tccgcattgg
     2881 ggccataacc ttcgaacagt cgatcgggaa tgtggatgag ggcgtgcagg ccgcaatggc
     2941 gcaggtatcg gcccagcacc gccgcggacg tcgcgccgtc gacatcgtaa tcgccgaaga
     3001 tggcgaccgt ttccccgcgg atgatcgctt ccgtcagccg ccccgcggcg atgcgcatgt
     3061 cggcgagcgt gtgcgggtcc ggcatgagcg cgcgcacggt cgggtcgagg aagctcggga
     3121 cctcgtccag ctcgacgccg cggccggcaa gaatgcgcgc cagcaactcg ggcatatccg
     3181 cgtagcgttg cgcgatcgcg agcgcgcgcg ctgcccctcg ttcgtcgagg cgatcgcacc
     3241 aggcgcgtcc gcaagccgag cgctccaccc cgagaaaaaa gcgccgtttg gtgacgattg
     3301 gcgccgtcag ggcgattgtc atctcaagca ccacgaatca catcaaaaaa gcttgcgata
     3361 ttggatgaag ccggagcgct ccgccagctt gtcgtagagc gctcgggcga ccgcattgct
     3421 ctcctgggtg agccaataga cgcg
//
LOCUS       DATCWM010000324         2450 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_159071, whole genome shotgun sequence.
ACCESSION   DATCWM010000324 DATCWM010000000
VERSION     DATCWM010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2450
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159071"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            287..1270
                     /locus_tag="VIQ50_06150"
     CDS             287..1270
                     /locus_tag="VIQ50_06150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008505193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HEY9359997.1"
                     /translation="MRAQLLTRSKQPLAAADLPQPRPGPGQLLIAVKACAVCRTDLHI
                     LDGELAQPKLPLVPGHEIVGTVVERGPDADRFAIDDRVGVPWLGWTCGVCEYCRSGRE
                     NLCDQARFTGYQIDGGYAELTVADQRYCFAIPECFDDVEAAPLLCAGLIGYRTLRLAG
                     AGERIGIYGFGAAAHIIAQVARHQGRQVFAFTRPGDMAAQDFARSLGAIWAGGSDETP
                     AEPLDAALIFAPVGALVPTALAATKKGGAVVCGGIHMSDIPPFPYSLLWEERLVRSVA
                     NLTRRDAEEFLALAPVAGISTATVSYPLSEANQALTDLRGGALQGAAVLVP"
     gene            complement(1274..2353)
                     /locus_tag="VIQ50_06155"
     CDS             complement(1274..2353)
                     /locus_tag="VIQ50_06155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020817899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HEY9359998.1"
                     /translation="MRKGIIVNTTAGDRARLRAVVANRNSPQKHVWRAKIILLTAEGL
                     GTNAIMRGTGRAKSVVWRWQERFMREGVDGLLRDKTRPPGRKPLEPAIIEQVVALTAK
                     DPPGETTHWTAGLMAKTVGISVSSVQRVWQAHGLQPHRVRRFKLSKDPEFVPKLREIV
                     GLYVNPPAHAIVLSVDEKSQIQALDRTQPGLPMKKGRAGTLTHDYKRHGTTTLFAALD
                     VLEGKVIGRCMQRHRHQEFIRFLNAIEAEIPVGKLVHVVLDNYATHKHPKVKAWLARH
                     PRFVFHFTPKSCSWLNAVETLFSRLTRRRLKRGVFRSIVDLQVAINRFLAETNADPKP
                     FVWTAHPDRVIAAVQRGIQILQSVH"
BASE COUNT          426 a          768 c          795 g          461 t
ORIGIN      
        1 tgcgattttg ctggagcgac gctatctaga ctttcggatt acacactccc accgtgaatc
       61 cattacctag tgcaccgagt ctaacggttg gatcccgctg gtggcgatca cgcggtcaag
      121 ggagcactcc aggcctttgg atcgtcattg gtctcggcga tgaagcgatt gagggctgct
      181 tgggagttcg acaactcatt gaaacacgct gccgcctggg acgtctgcgg atcagccgcg
      241 ctaaaatgcc aatggctacg aacgatagtc gcccaggagt cgattgatgc gcgcgcaatt
      301 gctgacccgc tcgaagcaac cgctcgccgc cgccgacctg ccgcagccgc ggcccggacc
      361 tgggcaattg ctgatagcgg tcaaagcctg cgccgtgtgc cgcaccgatc tccacatcct
      421 ggacggcgaa ctcgcgcagc cgaaactacc gctcgtgccc ggccacgaga tcgtcggcac
      481 agtggtcgag agggggccgg atgctgaccg ctttgcgatc gacgaccggg tcggcgtgcc
      541 ctggctcggc tggacgtgcg gcgtgtgcga atattgccgc agcggccgag aaaatttgtg
      601 cgaccaagcc cgcttcaccg gttaccagat cgatggcggc tacgccgaat tgactgtcgc
      661 cgaccagcgc tattgcttcg caatcccgga gtgcttcgat gacgtcgaag cggcgccatt
      721 gctgtgcgcg gggctgatcg gctaccgcac gctgcggctc gcgggcgcgg gtgaacggat
      781 tggcatctac ggcttcggcg cggcggcgca catcatcgcg caggtcgcgc gtcaccaggg
      841 acggcaggtc ttcgctttca cgcgccccgg cgacatggcg gcacaggatt ttgcgcgctc
      901 gcttggcgca atctgggccg gcggttcgga tgagaccccg gccgagccgc tcgacgccgc
      961 cttgatcttc gccccggttg gagctttggt cccgacggcg ttggccgcga cgaagaaggg
     1021 cggcgcggtg gtgtgcggcg gcattcatat gagcgacatc ccgccgttcc cttattccct
     1081 gctgtgggag gagcgactgg tgcgttcggt cgccaatctg actcgccggg acgccgagga
     1141 atttctcgca ttggcgcccg tggccggcat cagcaccgcg acggtcagct atccgctttc
     1201 tgaggccaac caagccctca ctgatctccg cggcggcgcc ctccaaggcg cagccgtcct
     1261 cgtgccgtag cagctagtgt accgactgta atatttggat gccgcgctga acggcggcaa
     1321 tgacgcggtc ggggtgagcg gtccagacga agggctttgg atcggcattg gtttcggcaa
     1381 ggaagcgatt gatggcgacc tggagatcga cgatcgagcg gaagacgccc cgcttgagac
     1441 gccgccgggt cagtcgcgag aacaaagtct cgacggcatt gagccaggag cacgatttgg
     1501 gggtgaagtg aaagacgaag cgcgggtgcc gcgccagcca agccttcacc ttgggatgct
     1561 tgtgggtggc gtagttatcg agcaccacat ggacaagttt gccgaccggg atctccgcct
     1621 cgatagcgtt caggaagcgg atgaactcct gatgacgatg gcgctgcatg cagcgcccga
     1681 tcaccttgcc ttctaggaca tcgagagcgg cgaacagcgt tgtcgtgcca tgccgcttgt
     1741 aatcatgcgt caaggtgccg gcgcggccct tcttcatcgg cagcccgggc tgggtgcggt
     1801 cgagcgcctg tatttgcgat ttctcgtcga ccgagagcac gatggcgtgc gctggcgggt
     1861 tgacatagag accgacgatc tcgcgcagct taggaacgaa ctccgggtcc ttcgacagct
     1921 tgaaccgccg tacccggtgc ggttgtagcc catgcgcttg ccaaacccgc tgcaccgacg
     1981 agacgctgat gccgaccgtt ttggccatca ggccagcggt ccaatgcgtc gtttcaccgg
     2041 gcggatcttt cgctgtcagg gcaacgacct gctcgatgat cgccggctcg agtggcttgc
     2101 ggcccggcgg acgggtcttg tcacgcaaca gaccgtccac gccctcccgc atgaaccgtt
     2161 cctgccagcg ccacacgacg gatttggcgc gcccagtgcc gcgcattatc gcgttggtgc
     2221 ccaggccctc cgccgtcagc aggatgatct ttgcccgcca gacgtgcttt tgcgggctgt
     2281 tgcggttggc gaccaccgct cgaagccgag cacggtcacc ggcggtcgta ttgacgatga
     2341 tccccttgcg catggtccag actcgcacgc tctgcacgag ccggaaatcc gcaaagggac
     2401 tcacccgtca gactggctgc actagaccga ttagacaacg cggcagccgg
//
LOCUS       DATCWM010000325         3556 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_213049, whole genome shotgun sequence.
ACCESSION   DATCWM010000325 DATCWM010000000
VERSION     DATCWM010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3556
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_213049"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(116..913)
                     /locus_tag="VIQ50_06160"
     CDS             complement(116..913)
                     /locus_tag="VIQ50_06160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006337004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEY9359999.1"
                     /translation="MIVDPPTQARTGRDGRASGQVPVVSYRDVVKRFGTVTVLAGVSI
                     QVHQGEVVCVIGPSGSGKSTLLRCTNGLELIDGGEISLDGKPLPHDWNGMRRIRQRMG
                     MVFQNFELFPHKTALNNVTIGPMTVLGLSRSEAEDRARGLLAKVGLADKAASYPAQLS
                     GGQQQRVAIARALAMHPEVMLFDEPTSALDPETIGEVLNVMKKLADEGMTMIVVTHEM
                     TFAQRVSDWIVVMDRGTVIEQGRPQQIFEAATVARTRDFLSHLGWAG"
     gene            complement(910..1569)
                     /locus_tag="VIQ50_06165"
     CDS             complement(910..1569)
                     /locus_tag="VIQ50_06165"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEY9360000.1"
                     /translation="MTLDWSVVPQHASALLEGAKLTVLLAVVTMLVAIPGGIVLALMR
                     LSSIRALGLAAAAFVELFRNLPLILVIYTAYYILPLATELNFSPLATGIIALSLNVSA
                     YNGETFRAGIASIRKGQSEAAFALGMSRWQTMRGIVLPQAIQRVFPVLTSTWVSLFKD
                     TSLVSVISVGELAYASMRVRSQTFRVLEMLTAMAAVYWLLGYPQAKLSDWVNRRYGVK
                     E"
     gene            complement(1566..2231)
                     /locus_tag="VIQ50_06170"
     CDS             complement(1566..2231)
                     /locus_tag="VIQ50_06170"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEY9360001.1"
                     /translation="MELDFSPVIASARYLIEGLQLTVLLSLLTILLSALFGGVLGLTR
                     SYGPSWLRWPIVFYIDSMRSIPVLVVLVWTYFALPIITGVVLPPFWAALVALTAHISA
                     FVAEIVRAGVLSVRRGQLYAAHALGMSRWQSIRTIVLPQAIVRMLPAFGSIISITIKD
                     TAIAAVIAVPEFMNRSQTVAGQSFHPIEVFTVAMAVYFLILFPVTRAVDALYGRLAYL
                     GRS"
     gene            complement(2300..3124)
                     /locus_tag="VIQ50_06175"
     CDS             complement(2300..3124)
                     /locus_tag="VIQ50_06175"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEY9360002.1"
                     /translation="MKMRILVSVLALLAAPSVSSAQDAPAAGKSPRIDAIKKSGALRV
                     AVLANAPWLVENTTGGGDQWSGPSWVLAKEYAKRLGVSVQPVLVSHETKIPVLAANQV
                     DISITPLAATPERNKVVDFVLYSNTSVCMFGRADNPKFAKAKSVDDLNSPDFTIAYFI
                     GGGEEGWVKQRFAKAKLLGVGMSGATAPLEDVMARRADAAPINRIPYVPMSRKVKGLA
                     VLPSANNCQDSTEKAQPVGVAIDKNQPDFLEWLRAVEKSIHPQLVAAEQQVVDTMK"
     gene            complement(3210..>3556)
                     /locus_tag="VIQ50_06180"
     CDS             complement(3210..>3556)
                     /locus_tag="VIQ50_06180"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FCD domain-containing protein"
                     /protein_id="HEY9360003.1"
                     /translation="IREVDHRGFFALDEAMHRTILEISGHAGVWDLITAVKAQLDRVR
                     YLSLEDQAWLTMIFRQHRAIVAAVVGQRPGAAEDALQKHLRTVFAAVDRIASANPEFF
                     ESDGGELRQESA"
BASE COUNT          682 a         1138 c         1126 g          610 t
ORIGIN      
        1 tggaacaaga tgagattgac gcggcggttc agatccgcca aaactcagga ggaacctgcc
       61 gtgtttcgca ccggaaagta gctaagatca gtgatcttgt tgtacgggcc cgagatcagc
      121 cggcccagcc gagatggctg agaaagtccc gcgtgcgggc gacggtcgcc gcctcgaaga
      181 tctgctgtgg ccgtccctgt tcgatgacgg tgccgcggtc catgacgacg atccaatcac
      241 tgacgcgctg ggcgaaggtc atttcatgcg tgaccacgat catagtcatg ccttcgtcgg
      301 ccagtttctt catcacgttg agaacctcgc cgatcgtctc cggatcgagc gccgacgtcg
      361 gctcgtcgaa cagcatgacc tccgggtgca tcgcgagcgc gcgtgctata gcgacgcgtt
      421 gctgctgtcc ccccgacaac tgcgcgggat agctcgccgc cttgtccgcc agcccgactt
      481 tggcgagcag gccgcgcgcc cggtcctcgg cttccgaccg cgagagcccg agcacggtca
      541 tcggaccgat ggtgacattg ttcaatgcgg tcttgtgcgg aaacagctcg aaattctgaa
      601 acaccatgcc catgcgctgg cggatgcggc gcatcccgtt ccagtcgtgc ggcagcggct
      661 tgccgtcgag cgaaatctct ccaccgtcga tcagctccaa gccgttcgtg catcggagca
      721 aggtcgactt gccggagcct gacggtccga tcacgcatac cacctcgccc tgatgcacct
      781 ggatcgagac gccggcgagc accgtcaccg tgccgaagcg cttgaccacg tcgcgatagg
      841 agacgacggg gacctgaccg ctcgctcgtc catccctgcc ggtcctcgct tgcgttggag
      901 ggtccacgat cattccttta ctccgtaacg gcgattgacc cagtcggaaa gcttggcttg
      961 cgggtagccc agcagccagt agaccgccgc catggccgtc agcatctcaa gcacgcggaa
     1021 ggtctgcgag cggacccgca tggaggcgta agccagttca cccacggaaa tgaccgatac
     1081 cagcgatgtg tccttgaaca gcgagaccca ggtcgaagtc agaaccggaa acacacgctg
     1141 gatcgcttgc ggcagtacaa tcccccgcat cgtctgccag cggctcatcc cgagcgcgaa
     1201 agccgcctcg ctttgcccct tgcggatcga ggcgatgcct gcgcggaacg tctcgccgtt
     1261 atacgcggaa acattcaggc tcaaggcgat gatgccggtc gccaatggcg agaagttcaa
     1321 ctccgtcgca agtggcagga tgtaataggc cgtgtagatg accaggatca gcggcaggtt
     1381 gcgaaacagc tcgacaaagg cagcggcggc gagacctagc gcccggatgc tcgacaggcg
     1441 cattaaggcg agaacgatcc cgccgggaat cgccacgagc atcgtcacca cggcgagcag
     1501 caccgtgagc ttggcgcctt cgaggagggc gctggcgtgc tgaggaacca cggaccaatc
     1561 gagcgtcatg atcggcccag ataggcaagc cgcccgtaga gcgcgtcgac ggcgcgcgtc
     1621 accgggaaca gaatgaggaa atagaccgcc atggcgacgg taaagacctc gatcggatgg
     1681 aagctctgcc cggcgaccgt ctgcgagcgg ttcatgaatt ccggcaccgc gatgacggcg
     1741 gcgatcgccg tgtccttgat cgtgatcgag atgatcgagc cgaaggccgg cagcatgcgc
     1801 acgatcgcct gcggcagcac gatcgtacgg atcgattgcc agcgcgacat gcccagcgca
     1861 tgtgctgcgt agagctggcc gcggcggacc gagaggacgc cggcgcgcac gatctcggcg
     1921 acaaaggccg agatgtgtgc ggtgagcgcg acgagtgccg cccagaacgg cggcagcacc
     1981 accccggtga tgatcggcag ggcgaaatag gtccagacca ggaccacgag caccgggatc
     2041 gagcgcatgg agtcgatgta gaacacgatc ggccagcgca gccacgacgg cccgtaggac
     2101 cgcgtcaggc cgagcacgcc cccgaacagg gcgctgagca gaatcgtcag cagcgacagc
     2161 aggaccgtca gttgcagtcc ttcgatcaga tagcgcgcgc tggcgatgac cggagaaaaa
     2221 tcgagttcca tcgcgtttcc ggttctggag aaatgcggtc cggctcgcga ccgggccgcc
     2281 tatttatcga gacgcgacgt cacttcatcg tgtcgacgac ctgctgctcg gccgcgacga
     2341 gttgcggatg aatggacttc tcgacggcgc gcagccactc caggaagtcc ggctggttct
     2401 tgtcgatggc gacgccgacc ggctgcgcct tttccgtgct gtcctggcaa ttgttcgcgc
     2461 tcggcagcac cgcaagcccc ttcaccttcc ggctcatcgg aacgtaggga atgcggttga
     2521 tcggagcagc gtccgcgcgc ctcgccatga catcctcgag cggcgcggtc gcgcccgaca
     2581 tgccgacgcc gagcagcttg gccttggcga aacgttgctt cacccagcct tcctcgccgc
     2641 cgccgatgaa ataagcgatt gtgaagtcgg gtgagttgag atcgtcgacc gatttcgcct
     2701 tcgcgaattt cgggttgtcg gcgcgcccga acatgcagac gctggtgttg gaataaagga
     2761 cgaagtcgac gaccttgttg cgctccggcg ttgccgcgag cggcgtgatc gagatgtcga
     2821 cctggttcgc cgccagcacc gggatcttgg tctcgtgcga gaccaggacc ggctgcacgc
     2881 tcacgcccag ccgtttggcg tactccttgg ccaggaccca ggacggccca gaccattgat
     2941 cgccgccgcc ggtcgtgttc tccaccagcc agggcgcatt ggcaagaacg gcgacgcgca
     3001 gcgcgccgct cttcttgatg gcgtcaatgc gcggactctt tccggctgcc ggcgcatctt
     3061 gagcgctgga taccgacggc gcggcgagca acgccagcac cgataccagg atgcgcattt
     3121 tcatgacgtg tctcccgttg tttgattttc atgagcatct tgcggacgcc cggtcgacgc
     3181 cggcatccgc agcgtcgaag ccgtctccat tacgcgctct cctgccgcag ctcgccgcca
     3241 tcgctctcga agaattccgg attcgcggag gcgatgcgat cgaccgccgc aaagacggta
     3301 cgcagatgtt tctgcaaggc atcctccgcc gccccgggtc gttggccaac gacggcggca
     3361 acgatcgcac gatgttgtcg gaagatcatg gtgagccagg cctgatcctc caacgagagg
     3421 tagcgcacgc gatcgagctg cgccttcacc gccgtgatca ggtcccagac gccggcgtgc
     3481 cccgagatct cgaggatggt ccggtgcatc gcctcgtcca gcgcgaagaa gccgcggtga
     3541 tcgacctcgc ggatcg
//
LOCUS       DATCWM010000326         2379 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_353424, whole genome shotgun sequence.
ACCESSION   DATCWM010000326 DATCWM010000000
VERSION     DATCWM010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2379
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_353424"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..269
                     /locus_tag="VIQ50_06185"
     CDS             <1..269
                     /locus_tag="VIQ50_06185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="S4 domain-containing protein"
                     /protein_id="HEY9360004.1"
                     /translation="GALAETLPTVEIPSGKLQPVLSVLDAAVHVGLVSSKGEARRQIK
                     GGGLKVNDVTVADEKMVLTPRDLTPEGVIKLSLGRKRHVLLRPV"
     gene            complement(305..>2379)
                     /locus_tag="VIQ50_06190"
     CDS             complement(305..>2379)
                     /locus_tag="VIQ50_06190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360005.1"
                     /translation="DPRLTLGIAGTRMSVAALKRLWPLTVATKVRAWVLDHVQAGTVE
                     RLDISTNALWSTLKSTGPPVPDDGLLIQIIGNGIEIRPVEGLPAIRDADVNVHVSGRT
                     AVINVGRGNVDISPGRKLSITSGSFEVPDTFPKGPPAKARFRLDGSVPAAVELLNMQR
                     LRDYSGAPVESATSRGTLTAQVTLALPLKEDLPPGSTLYTINMDVANFAAERMVMGQK
                     VEAQLLKVTANNVGHWIRGDVKINGIPSVLDYRKPRDGDADVRVQATLDESARSKFGF
                     DLGGLLTGPVPIKLSGRVAASDGESRFAMEADLSQAKVDNLLPGWLKPPGRPARATFT
                     LINKPAATRIEDLMVEGAGASVKGTVEVDASGDVVSANFPTFALADGDKATLKAERGS
                     DGALRVTMRGDVFDARGFVKSTLTGPASSNKQKQDKDIDVDVKIATVIGFNGETLRGL
                     DLRASRRGGVITSLALNSKLGRDAPLTGDLRGRGRQVIVLESNDAGAFFRFNDIYPKL
                     AGGEMWVALDPQSAELSPQEGTLNIRDFVVRGEAALERVAAAPQQAGGQSPGVEFSRL
                     WVQFTRSPGRFTIRDGLLKGPAIGGTVDGYIDYHRDEVRMRGTFVPLYGLNNMFGQLP
                     IVGPFLGGSNEGLLGVTYEVVGPPSTPVLRVNPISAVAPGLLRKFFEFPGGNVPLPAQ
                     SYAEPGRY"
BASE COUNT          411 a          771 c          795 g          402 t
ORIGIN      
        1 aaggcgcgct cgccgagacg ctgccgacgg tcgaaattcc cagcggcaag ctccaacccg
       61 ttctcagcgt gctcgacgcc gccgttcacg tcggcttggt gtcgtccaag ggcgaggcgc
      121 gccggcagat caagggcggc ggccttaagg tcaacgacgt cacggtcgcc gacgagaaga
      181 tggtgctcac gccacgtgat ctcaccccgg aaggcgtcat caagctgtcg ctgggcagaa
      241 aacggcacgt gttgttgcgg ccggtgtaat cgaagcgcgc ggatcgcaaa gacggccgtc
      301 ggtgctaata gcggcccggt tcggcgtagc tttgcgccgg cagcggaacg ttgccgccgg
      361 ggaactcgaa gaacttgcgc aacaagcccg gcgccaccgc ggaaatcgga ttgacgcgca
      421 gcaccggcgt gctcggcggc ccgactactt cataggtcac cccgagcagg ccttcattgc
      481 tgccgccgag gaacggcccg acgatcggca gctggccgaa catgttattg agcccataga
      541 gcggaacgaa ggtgccgcgc atgcgcacct cgtcgcgatg gtaatcgata tatccatcga
      601 cagtgccgcc gatcgctggg cctttgagca gcccgtcgcg gatggtgaaa cggccgggcg
      661 aacgggtgaa ctggacccac aggcgcgaga actcgacgcc cggcgattgg ccgccggctt
      721 gctgcggagc ggcggcgacg cgctcgagcg cggcttctcc gcgcaccacg aagtcgcgaa
      781 tgttgagagt accttcctgc ggggagagct ccgcgctctg tggatcgagc gccacccaca
      841 tctcgccgcc ggcaagcttc ggatagatgt cgttgaagcg gaaaaaagcg ccggcgtcgt
      901 tggactcgag gacgatgacc tggcggccgc gcccgcgcag atcgccggtg agcggcgcat
      961 cgcgcccgag cttggagttc aacgccaggc tggtgatgac accgccacgg cgcgaggcgc
     1021 gcagatcgag cccgcgcaag gtctcgccgt tgaagccgat caccgtggcg atcttcacgt
     1081 caacatcgat atccttgtcc tgtttctgct tgttgctgct ggcgggaccg gtcagggtcg
     1141 atttgacgaa gccgcgtgcg tcgaacacgt cgccgcgcat ggtcacccgc agggccccgt
     1201 cgctgccccg ctccgctttg agcgtcgcct tgtcgccgtc ggcaagcgca aaggtgggaa
     1261 aatttgcgga gacgacgtca ccggaggcat cgacctcgac cgtgcctttg accgaagcgc
     1321 cggctccttc caccatcaaa tcttcgatcc gcgtggccgc gggcttgttg atcagcgtga
     1381 aggtcgcgcg tgccgggcgg ccaggaggct tcagccagcc gggcagcagg ttgtcgacct
     1441 tggcctggct gagatccgcc tccatggcga atcggctctc gccgtcgctt gctgcaacgc
     1501 gtccgctgag cttgatcggc accggcccgg tgaggagccc gccgagatcg aaaccgaatt
     1561 tgctgcgcgc gctctcgtcg agcgtagcct ggactcgaac gtctgcatcg ccgtcgcgcg
     1621 gcttgcggta atcgagcacg gaaggaatgc cgttgatctt gacgtcaccc ctgatccagt
     1681 ggccgacatt gttggcggtc accttgagca gctgcgcctc gaccttctgc cccatcacca
     1741 tgcgttcagc ggcgaagttc gccacgtcca tgttgatcgt gtagagcgtg gatccaggcg
     1801 ggagatcctc tttgagcggc aacgcgagcg tcacctgggc ggtgagcgtc ccgcggctgg
     1861 tcgcggactc aaccggcgcg cccgaatagt cgcgcagccg ttgcatgttc agaagctcga
     1921 ccgccgccgg cacagaaccg tcgagacgga agcgcgcctt cgccggcggc cccttgggga
     1981 aagtgtcggg cacttcgaag gagccgctgg tgatcgagag cttgcggccg ggcgatatgt
     2041 ccacattgcc gcggccgaca ttgatcacgg cggtgcggcc ggaaacgtgc acgttgacat
     2101 cggcgtcgcg gatcgccggc aagccttcga ccggccggat ttcgataccg ttgccaatga
     2161 tctggatcaa caagccgtcg tcgggcacgg gcggcccggt cgacttcagc gtggaccaca
     2221 gcgcattggt cgagatgtcc agccgctcga cggtaccggc ttgcacgtgg tcgagcaccc
     2281 aggcgcgcac cttcgtcgct acggtgagcg gccacagccg cttgagcgcc gcaaccgaca
     2341 tgcgcgtacc ggcgatcccg agcgtcagcc ggggatcgt
//
LOCUS       DATCWM010000327         3376 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_423538, whole genome shotgun sequence.
ACCESSION   DATCWM010000327 DATCWM010000000
VERSION     DATCWM010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3376)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3376
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_423538"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..824)
                     /gene="glmM"
                     /locus_tag="VIQ50_06195"
     CDS             complement(<1..824)
                     /gene="glmM"
                     /locus_tag="VIQ50_06195"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029512.1"
                     /note="catalyzes the conversion of glucosamine-6-phosphate
                     to glucosamine-1-phosphate; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEY9360006.1"
                     /translation="MAHKYFGTEGIRGRANVAITPELALRVGQAAGRIFRRGDYRNRV
                     LIGKDTRRSGYMIETALVAGFTSMGMDVLLTGPIPTPAVGMLTRSMRADLGVMISASH
                     SPFDDNGIKLFGPDGFKLSDEVEQQIETLMDSDLTKQLAKSDDVGRAKRIDGVQDRYI
                     EFAKRTLPRNLSLEGLRVVIDCANGAGYQVAPKALRELDAEVIAIGIEPNGVNINREC
                     GSTEPTALRQKVKEMRADVGIALDGDADRLLIVDERGDIVDGDQLLAVIAESWQADG"
     gene            complement(953..1213)
                     /locus_tag="VIQ50_06200"
     CDS             complement(953..1213)
                     /locus_tag="VIQ50_06200"
                     /inference="COORDINATES: protein motif:HMM:NF037270.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360007.1"
                     /translation="MQIEAGQTLCPACGADGLKFFPVLHHMICAYVGPQYDFIPAATG
                     YTCPKCRRGITSGDTACEIVGASARCIRCGKEMVVPPPAASS"
     gene            complement(1249..2301)
                     /locus_tag="VIQ50_06205"
     CDS             complement(1249..2301)
                     /locus_tag="VIQ50_06205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015951923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEY9360008.1"
                     /translation="MNVTINRLDPNVPDPVESRRRAAGRFVRFAYAVIVFGVLGFFII
                     YFAAPFVFLGGPGTVTSRRYVVSLPYTVQVMRMNLASGATVKAGDEIAQVISPEQERI
                     VATYMQALADINGRTAELRIKARVAQDVLQAARSYELVTQEAVERLGAMTVATVTFRM
                     EVLREYASARKAVVSAEAEVSESKVQLASLDEFIKQLQGHLDDVQRDFGHGKVLAPVG
                     GIVSTGLADIGQSLTAGTPIAEILDPTDIFVDWYIPNERLIDPKVGYDVVVVFGNRRI
                     PGKIAQILPVSAVYAGTQQQQLLARDRPATQMARIRFAKDALPPPLNTTVDVRMHYSE
                     FSARIADKLVWLFGLH"
     gene            complement(2314..3321)
                     /locus_tag="VIQ50_06210"
     CDS             complement(2314..3321)
                     /locus_tag="VIQ50_06210"
                     /inference="COORDINATES: protein motif:HMM:NF025017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEY9360009.1"
                     /translation="MSAFGAKRTCRGCSRCGRGARALGQVSMVICHGTRCGRSPAINA
                     GARFASGDLILTVDADTVFEPTAVARVAAAFSDPRVGGATCNIAISNERESLWTGLQA
                     VEYLMSISAGKSMLDMADAIACLSGACSMYRRDVFLRQGGLDVGPGEDLEFSLRLRRL
                     GYVIRFAPEAWAQTDGPTNGISLLRQRARWDRDALRIRFMTYGELSFFHRFERLSDTF
                     QRLDFIVFDLVPTITLPFYLAYLVLLFGAHDAALFLGAIYVVLFWISMFNMALAFVMF
                     NRSLGLFALGTSLIFPLYQGVFMKCARFFSYSSEILFATSRHDDFVPPRVRRALFGHR
                     I"
BASE COUNT          707 a         1063 c         1025 g          581 t
ORIGIN      
        1 ccgtccgcct gccagctctc agcgataacc gcgagcagct ggtcgccgtc gactatatcg
       61 ccgcgctcgt cgacgatcag gagacgatcg gcgtccccgt ctagcgcgat gccgacgtcg
      121 gcgcgcatct cctttacctt ctgacggagc gcggtaggtt cggtcgagcc gcattcgcgg
      181 ttgatgttga ccccattcgg ctcgatgccg atcgcgatca cctcggcatc gagctcgcgc
      241 agcgcctttg gcgcgacctg atagccggca ccattcgcgc agtcgataac cacccgcagc
      301 ccctctagcg aaaggttcct tggcaaggtg cgcttggcaa actcgatgta gcgatcctgc
      361 acgccgtcaa tgcgcttggc gcggccgaca tcgtcgctct tggccaactg tttggtaagg
      421 tcggagtcca taagcgtttc gatttgctgc tcgacctcgt ctgagagctt gaacccgtcc
      481 ggcccaaata atttgatacc gttgtcgtcg aacgggctgt gcgaggctga gatcatgacc
      541 ccgagatcgg cgcgcatgga gcgggtgagc atcccaaccg ccggcgtggg gatcggcccg
      601 gtgagcagca cgtccatgcc catcgaggtg aagcccgcga ccagcgcggt ttcgatcatg
      661 tatccggagc gccgcgtgtc cttgccgatg agcacccgat tgcgataatc gccgcggcga
      721 aagatccggc cggccgcctg gccgacgcgc agtgccaatt ccggcgtgat tgccacattg
      781 gcgcggccgc ggatcccttc cgtgccgaag tatttgtgcg ccatagtccc ctaaaacccc
      841 aatgacggtc gcgatccaat gataggtcaa tcaacggtca aggtcctgca aaaaaaggcg
      901 tgcggggctt acatccggtc agcgttcgcg cccacctcgg ctgcctcggt gctcaagaag
      961 aagcggcagg cggcggcacc accatctcct tgccgcatcg gatacagcgc gcgctcgccc
     1021 cgacgatctc gcaagcggta tcgcccgacg tgatgccgcg ccggcatttc ggacaggtat
     1081 atccggtggc tgccggaatg aaatcatact gcggaccgac ataggcgcag atcatgtgat
     1141 gcagcaccgg aaaaaacttc agcccatcgg cgccgcaggc cgggcacagc gtttgacccg
     1201 cttcaatctg catcgtgtgg cactccgcgc gccatcgccg gcgtcccgtc aatgaagccc
     1261 gaacagccag actagcttgt ccgcgatgcg ggcggaaaat tcgctgtaat gcatgcgaac
     1321 atcgaccgtc gtgttcagcg gcggcggcaa cgcgtcctta gcgaagcgga tgcgcgccat
     1381 ctgcgtcgcc ggacggtcgc gcgccaacag ctgctgctgc tgggtccccg cgtacaccgc
     1441 ggaaaccggc aggatttgcg caatctttcc gggaatgcgg cgattgccga acaccacgac
     1501 aacgtcgtac ccgaccttgg gatcgattag ccgctcgttg ggaatgtacc aatccacgaa
     1561 gatgtcggtc ggatcgagga tttcggcgat cggcgtgccg gccgtcagcg actggccgat
     1621 atccgcgaga cctgtcgaga ctatcccgcc aaccggcgcg agaaccttgc catggccgaa
     1681 atcgcgctgc acgtcatcga ggtgcccttg aagctgtttg atgaattcat caagcgaggc
     1741 gagttgaacc ttggactcgg agacttccgc ctccgccgag accacggctt tgcgggccga
     1801 agcgtactcg cgcaagacct ccatgcggaa ggtcacggtg gccaccgtca tggcgccgag
     1861 gcgttctact gcttcctggg tcacgagctc ataggagcgc gccgcttgga gaacgtcctg
     1921 cgcgacccgc gccttgatgc gcagctccgc cgtgcgaccg ttgatgtcgg ccaacgcctg
     1981 catataggtg gcgacgattc tctcctgctc cggcgaaatc acctgtgcga tctcatcgcc
     2041 ggccttcacc gttgcgccag acgccaggtt catgcgcatg acttgcacgg tataaggaag
     2101 cgaaaccaca tagcgccggg acgtcaccgt gccggggccg ccgagaaaga cgaagggcgc
     2161 agcgaaatag atgatgaaga agccgagtac gccaaacacg atcaccgcat aggcgaagcg
     2221 cacgaaacgc ccggccgcgc gccggcggct ttcaacagga tcgggaacgt tcggatcgag
     2281 gcggttgatc gtgacattca tcgggtccgc tcctcaaatc cgatgcccaa agagcgcgcg
     2341 gcgaacccgt ggtggtacga agtcatcgtg tcgcgacgtc gcgaacagga tttccgagga
     2401 gtacgaaaag aaccgggcgc acttcataaa gaccccctgg tacaggggaa agatcagcga
     2461 cgtgccgaga gcaaagagac cgagcgatcg attgaacatg acgaacgcaa gcgccatgtt
     2521 gaacatcgaa atccagaaca gcacgacata gatcgcaccg agaaacagag ccgcgtcgtg
     2581 ggcgccgaac aacagtacga ggtaagccag ataaaacggc agggtgatcg tgggaactag
     2641 atcgaacaca atgaagtcca gccgctgaaa tgtgtcggac aagcgctcga agcgatggaa
     2701 gaaactcagt tcgccatacg tcatgaatcg gattcgcaag gcatcgcgat cccaacgtgc
     2761 gcgctggcgc aacaggctta tgccattggt cgggccgtcg gtttgcgccc aggcctccgg
     2821 cgcgaaacgg atcacataac cgaggcgacg cagccgcaag ctgaactcga gatcctcccc
     2881 ggggccgaca tcgagcccgc cttgccggag gaatacatcg cggcgataca tggaacacgc
     2941 gcccgataaa cacgcgatcg cgtcggccat gtccagcatg gatttccctg cgctgatcga
     3001 catcaggtac tcgacagctt gcaggccggt ccacagggat tcgcgctcgt tgctgatcgc
     3061 aatgttgcaa gttgccccgc caacgcgcgg gtcgctgaat gcggctgcaa cgcgcgcgac
     3121 ggccgtgggc tcgaacaccg tgtcggcatc cacggttaag atgagatcgc cgctggcaaa
     3181 ccgggcgccg gcgtttattg ccgggctacg gccacagcgc gtgccatggc agatcaccat
     3241 gctgacctga cccagcgcgc gcgctccgcg accgcagcgg ctgcaaccac ggcatgtccg
     3301 ctttgccccg aaagcggaca tgcagaagat cgaagctagg aagtccgctt tgtgccaaaa
     3361 gcggacattt actagc
//
LOCUS       DATCWM010000328         3291 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_83605, whole genome shotgun sequence.
ACCESSION   DATCWM010000328 DATCWM010000000
VERSION     DATCWM010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3291)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3291)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3291
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83605"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(45..2387)
                     /locus_tag="VIQ50_06215"
     CDS             complement(45..2387)
                     /locus_tag="VIQ50_06215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014493476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9360010.1"
                     /translation="MAATPMRPAAKPGFWLVAKREWRWLLHDHAARILIFAVPVFAFT
                     VLTAVFSHPVIRELGVVVVDADRSDTSRMFVEQVAASPNLAIVERPGDLASAARAIRS
                     GEAIAAIYIADNFERDLKAGRRPQVVAFYNQQFLTAAGVASSGLSDSLTAAVENAASA
                     ARGAPQAAHTGSLVAETIVLVNPARNYAQFLLRALLPMVLHVVIALAAGYAVGSEFHR
                     RSMRAWLACAGGNPVIALAGKLAPLFAVFLVFMLTLPLILEGLLGISFRGDTPMVTIA
                     AVLLIVGYLALGALMQLLVSDLATGLGITGLIVSPAFGYAGVGFPVLGMNAFALAWGA
                     LLPLRWYMAVLLGQAARGLPLYETARPFAALAALAVLYTLLALLRLRAIAGSAPRIPP
                     ETEPAAPAAAPPRGLGGAFVAEWQRVLAIRGAFMLLVMGPLVYGIYYPQPYLNQIVRK
                     IPIAVVDNDLSDLSRNIVQTLDASGAVSVVVQAETLAEARKVLDRGEAFAVVGIPPDT
                     ERDVLKGNTAHIPIYADATYLFIFRSMANGIAVAINTLSSELAAGGARTDGSLVKAAL
                     ASTSPAEILLQPIFNPVGGYASYIVPAAFVLILQQMLLIGASMLTVMALPQPAAGAFA
                     TVLGRGIAHLTIYLPALALYFIVLPRVYGFSTLGHPLQLFALASLFTLATSFMAQAAG
                     AWFKHPETPTLIFLGTSIPQLFLTGFSWPREAIPRPVQVAGYIFPSDFAIDGMVRIDQ
                     LGATLWEVVRDWRGLWALAIIYFVLAVMSAALVKRRRAHG"
     gene            complement(2369..>3291)
                     /locus_tag="VIQ50_06220"
     CDS             complement(2369..>3291)
                     /locus_tag="VIQ50_06220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014493477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY9360011.1"
                     /translation="IWYLVRPQPLLVQGEVDATRFDIAARVDGRVAEIPVVRGQNVAA
                     GAVLVRIDNPETIAKNQQAVAAKIVAEAQLANINVGTRAEVIAARKAALERAQASVVL
                     AQKTYDRISQLAEHGNAPIARLDQATDSLHESQRAVDQAQSAYDQAVNGYTREEHEIA
                     EANVGKAIADIKAVQSIIDQMVIYAPVDSQVYKRNVEPGEYVSPGVPLVTLIDLNDLW
                     VHFDLREDLVKTLKVGDRFGVRIPALADRLITVEVRLIATKGEYASWRATRATGDFDL
                     RTFSIRAYPVEKVPELRPGMSAYLEWQQRR"
BASE COUNT          611 a         1060 c         1104 g          516 t
ORIGIN      
        1 cgacgagggc gagccccagc gcgatgatcc ctctgctcgc ccggctaacc atgcgcgcgc
       61 cttcgcttga ccagcgccgc ggacatcacg gcaagcacga aatagatgat ggcaagagcc
      121 cacaaaccgc gccagtcgcg caccacctcc cagagggttg cgccgagctg gtcgatgcgg
      181 accatgccat cgatcgcgaa gtccgacgga aatatgtaac ccgcgacctg caccggcctg
      241 gggattgctt cacgcggcca ggaaaagccg gtcaggaaaa gctgaggaat gctcgtgccg
      301 aggaagatga gggtcggcgt ctcaggatgc ttgaaccagg cccccgccgc ctgggccatg
      361 aaactggtcg cgagcgtgaa caacgacgcg agcgcgaaca gctgcagcgg atggccgagc
      421 gtggagaaac cgtagacgcg cggcagtacg atgaagtaga gcgcgagcgc cggcaaatag
      481 atcgtcaggt gggcgatgcc gcgaccgagc acggtcgcga acgccccagc ggcaggctgc
      541 ggcagcgcca tcaccgtcag cattgacgcg ccgatcagca gcatctgctg caggatcagc
      601 acgaaggccg ccggtacgat gtagctcgca taaccgccga ccgggttgaa gatcggctgc
      661 agcaggattt ccgccgggct cgtcgacgcg agcgccgctt tgacgaggct gccgtcggtg
      721 cgcgcgccgc cggcggcaag ctcggaggag agggtattga tcgcgacggc gatgccgttc
      781 gccatcgatc ggaagatgaa cagataggtg gcatcggcgt agatgggaat atgggcggtg
      841 ttgcccttga gcacgtcgcg ctccgtgtcg ggcgggatgc cgaccacagc gaatgcctcg
      901 ccgcgatcga gcaccttgcg cgcttcggcg agcgtttcgg cttgcacgac cacgctgacc
      961 gcgccgctgg catccagcgt ctgcacgatg ttgcggctga ggtcgctcag gtcgttgtcg
     1021 accaccgcga tcgggatttt gcgcacgatc tgattgagat acggctgcgg gtagtagatg
     1081 ccgtaaacca gcggacccat cactaggagc atgaaggcgc cgcggatcgc gagcacgcgc
     1141 tgccactcgg caacgaaggc tccgccaagt ccgcgcggcg gggcggcagc tggtgccgcc
     1201 ggctccgttt ccggcggtat tcggggcgca cttcccgcga tcgcgcgcaa gcgcagaagc
     1261 gcgagcagcg tgtaaagcac ggcgagtgcc gccagcgcgg cgaagggccg cgcggtctca
     1321 tatagaggta acccccgcgc cgcctgcccg agcagcaccg ccatgtacca gcgcaagggc
     1381 agaagcgcgc cccaggccaa cgcaaatgcg ttcatgccca gaactggaaa tccgactccg
     1441 gcgtaaccga aggcgggcga tacgatgagg ccggtaatcc ctagaccggt tgccagatcg
     1501 ctcaccagca gctgcatcaa tgctcccaac gccaggtagc cgacgatcag cagcacggcg
     1561 gcgatggtca ccatcggcgt gtcgcctctg aaagagatcc cgagcagtcc ttccaggatc
     1621 agcggcagcg tcagcatgaa gacgaggaag acggcgaaca ggggcgcaag cttgccggcc
     1681 agcgcgatga ccggattgcc gcccgcgcag gcgagccagg cgcgcatgct gcggcggtgg
     1741 aattcggagc ccaccgcgta gccggcagca agcgcgatga ccacatgcag caccatcggc
     1801 aacaacgcgc gcagcaggaa ctgcgcgtag ttccgcgccg gattgaccag cacgattgtc
     1861 tcggcgacaa gcgatccggt gtgggcggct tgcggcgctc cgcgcgccgc ggacgccgcg
     1921 ttctccacgg cagccgtgag actgtcgctc agtccggagg acgccacacc cgcggcggtc
     1981 aggaattgct ggttgtagaa ggcgacgact tgcgggcgtc tcccggcttt gaggtcgcgc
     2041 tcgaaattgt ccgcaatgta gatggcggcg atggcttcac cggagcggat ggcgcgggcg
     2101 gcggatgcga gatcgcctgg acgttcaacg atggcgagat tgggagaggc agccacctgt
     2161 tccacgaaca tgcgcgaggt gtcggatcgg tccgcgtcga cgacgaccac cccgagttca
     2221 cgaatgaccg gatggctgaa caccgcggtt aggaccgtga aggcaaatac cggcacggcg
     2281 aagatcagaa tgcgcgcggc gtggtcatgc agcagccacc gccattcgcg cttggcgacg
     2341 agccagaagc ccggcttcgc cgccggcctc atcggcgttg ctgccattcc aggtatgcgc
     2401 tcatgccggg ccgcagctcc ggcaccttct cgaccggata ggcgcggatc gaaaacgtcc
     2461 gtaggtcgaa gtcgccggtg gcgcgggtgg cgcgccagct cgcgtattcg cccttggtcg
     2521 cgatcagcct cacctcgaca gtgataagcc ggtccgccaa cgccggaatg cgcacgccga
     2581 agcggtcgcc gaccttcagc gtcttgacca agtcctcgcg caggtcgaag tggacccaca
     2641 ggtcgttgag atcgatcagc gtcaccagcg ggacgccggg cgagacgtat tcgcccggct
     2701 ccacgttgcg cttgtaaact tgcgagtcga ccggcgcgta aatcaccatc tgatcgatga
     2761 tcgattgcac ggccttgatg tcggcgatgg ccttgccgac attcgcctcc gcgatctcat
     2821 gctcctcgcg cgtgtagccg ttgaccgcct gatcgtacgc cgattgggcc tggtccacgg
     2881 cgcgttggct ttcgtgcaag gagtccgttg cctggtcgag ccgggcgatc ggggcgttcc
     2941 catgctcggc caattggctg atgcggtcat aggtcttttg cgccaatacc acgctcgcct
     3001 gcgcccgctc gagcgcggcc ttgcgcgcag caatgacctc cgcgcgtgtg ccgacattga
     3061 tgttggcgag ctgtgcctcg gcaacgattt tggcggcgac cgcctgctgg ttctttgcga
     3121 tcgtctcggg attgtcgatg cggaccagca cggcgccggc ggcaacgttc tgcccgcgca
     3181 cgaccggaat ctccgcgacc cgtccgtcaa cccgcgcggc gatgtcgaac cgcgtcgcgt
     3241 ctacttcgcc ttgcaccagc agcggctgcg gccgcaccag gtaccagatg g
//
LOCUS       DATCWM010000329         2711 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_283247, whole genome shotgun sequence.
ACCESSION   DATCWM010000329 DATCWM010000000
VERSION     DATCWM010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2711
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_283247"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..671
                     /locus_tag="VIQ50_06225"
     CDS             <1..671
                     /locus_tag="VIQ50_06225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018855712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY9360012.1"
                     /translation="KAKKVAAHMLEAAEGDIEFRDGKFTVAGTDKSAAWGEVSLNAYI
                     AHKFAGQELEPGLKEGAFYDPTNFTFPAGCHICEVEVDPQTGESEIMAWTAVDDFGTV
                     VNPMIVEGQVHGGIAQGVGQALLEGAVYDKDGQLVTGSLMDYCMPRAHDLPTLKVEMT
                     RTPSPSNPLGIKGCGEAGAIAAPVAVINAITDAIGSEDLAMPATAQAVWQALQKAHDR
                     RKAA"
     gene            683..1480
                     /locus_tag="VIQ50_06230"
     CDS             683..1480
                     /locus_tag="VIQ50_06230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HEY9360013.1"
                     /translation="MYAFTQHRPATVRQAASLLTKQEEAKLLAGGHTLIPTMKLRLAG
                     PKNLVDLSKVEGLTGIEMKGRSLTIGAMTTHVEVETSPIVRENSPALAELAGKIGDPA
                     VRHRGTIGGSLANNDPNADYPAAALGLGATIITNKRRIPADEFFKGLFETALEPDEII
                     TKVQFPKVNKAAYVKFPNPASRFALVGVFVSKRSSEIRVAVTGAGASGVFRVTAFEEA
                     LKKRFGAKSLEGSTVPADGMASDIHGSAEYRAHLIGVLARRAVAAAG"
     gene            1622..2548
                     /locus_tag="VIQ50_06235"
     CDS             1622..2548
                     /locus_tag="VIQ50_06235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEY9360014.1"
                     /translation="MTATPHSLPDSIDATLDLLAAADYLADRSLATVLFLALKMGRPL
                     FLEGEAGVGKTEIAKVLSSTLGRRLIRLQCYEGLDVSAAVYEWNYAAQMIAIRVAEAE
                     GAHDRERLEHDVFSERFLIKRPLLQALEPDPAGAPVLLIDELDRADEAFEAFLLEVLA
                     DFQVTIPELGTVKANEPPIVVITSNRTREIHDALKRRCLYHWVGYPAAERELKIVRAK
                     VPGVGKILSEQVVHFVQALRREDLFKAPGVAETLDWAAALAELDVAALDPATVSDTLG
                     VLLKYQDDIARIQGGKVKDLIDEVRAQLRAAE"
BASE COUNT          494 a          888 c          908 g          421 t
ORIGIN      
        1 ccaaggcgaa gaaggtcgcg gcgcacatgc tggaagcggc cgagggcgac atcgagttcc
       61 gggacggcaa gttcacggtc gccggcaccg acaagtcggc ggcctggggc gaggtctcgc
      121 tcaacgccta tatcgcgcac aaattcgccg gccaggagct cgagccgggg ttgaaggaag
      181 gggcgttcta cgaccccacc aatttcacct tccccgccgg ctgccacatc tgcgaggtcg
      241 aggtcgatcc gcagaccggc gagagcgaga tcatggcctg gaccgcggtc gacgatttcg
      301 gcacggtggt caatcccatg atcgtcgagg gccaggtgca tggcggcatc gcgcagggcg
      361 tgggccaggc gctgctcgag ggcgcggtct acgacaagga cggccagctc gtcaccggct
      421 cgctcatgga ttactgcatg ccgcgggcgc atgatctgcc cacactcaag gtggaaatga
      481 cccgcacgcc gtcgccgtcg aacccgctcg gaatcaaagg ctgcggcgag gccggtgcaa
      541 tcgccgcgcc ggtggccgtc atcaacgcca tcaccgatgc catcggcagc gaggatttgg
      601 ccatgccggc aaccgcgcag gcggtgtggc aggcactgca aaaagcccac gacagacgca
      661 aagcggcata ggagcagtca cgatgtatgc attcacccaa caccggccgg caaccgtgcg
      721 gcaggcggcg agcctgctca ccaagcaaga ggaagccaag ttgcttgccg gcgggcacac
      781 tctcatcccg accatgaagt tgcggctcgc cgggccgaag aatctcgtcg acttgtcgaa
      841 ggtcgaaggc ctgaccggca tcgagatgaa aggccgctcg ctcaccattg gtgcgatgac
      901 cacccacgtc gaggtcgaga cctcgccgat cgtgcgggaa aacagtccgg cgctggcgga
      961 gcttgccggc aagatcggcg atccggcggt acgtcatcgc ggcacgatcg gcggctcgct
     1021 cgccaacaac gatcccaatg ccgactaccc cgctgccgcg cttggtctcg gcgccaccat
     1081 catcaccaac aagcggcgga ttcccgccga cgaattcttc aagggcctgt tcgagaccgc
     1141 gctcgagccg gacgagatca tcaccaaggt gcagttcccg aaagtcaaca aggcggccta
     1201 tgtgaagttc cccaacccgg cctcgcgttt tgcgctggtc ggcgtgttcg tgtcgaagcg
     1261 cagctcggag atccgcgtcg cggtcaccgg cgcgggcgcg agcggcgtgt tccgcgtgac
     1321 ggcgttcgag gaggcgctca agaagcgctt cggggcgaaa tcgctcgaag gatcgacggt
     1381 gccggcagac ggtatggcga gcgatatcca cggcagcgcc gaataccgcg cgcacctcat
     1441 cggcgtgctg gcgcgccggg cagtcgcggc ggcaggctga tcccgggtgg catcagtaaa
     1501 tcggtcagtc agaagctgga aaccgccctg gtcgaaccgc tgatcactga cccccaatgc
     1561 ggcccacgtc tgcgttcttg gcaggacaag cgcggcggtg agaggctata agctcggcgt
     1621 gatgacagcg acgccgcatt cactgcccga ctcgatagac gccaccctgg atctgcttgc
     1681 cgcggccgat tatctggccg accgttcgct cgcgaccgtg ctgtttctcg cgctgaagat
     1741 gggccggccc ttgtttctcg aaggagaggc gggcgtgggc aagaccgaga tcgccaaggt
     1801 cttgtcctcg acgctcgggc gccgcctcat ccgcctgcag tgctacgagg gtcttgacgt
     1861 ttcggcggcg gtctacgagt ggaactatgc cgcgcagatg atcgccatcc gcgtcgccga
     1921 ggccgaaggc gcccacgacc gcgagcggct cgagcacgac gtgttctccg agcgcttcct
     1981 gatcaagcgg ccgctgctac aggcgctcga gccggatccg gccggcgcgc cggtgctgct
     2041 gatcgacgag ctcgatcgcg ccgacgaagc cttcgaggcg ttccttttgg aggtgcttgc
     2101 cgattttcag gtcacgatac cggagctcgg cacggtgaag gcgaacgagc cgccgatcgt
     2161 ggtgatcacg tccaaccgca cgcgggaaat tcacgacgcg ctcaaacgcc gctgtctcta
     2221 ccactgggtc ggctacccgg cggccgagcg cgaattgaag atcgtgcgcg ccaaggtgcc
     2281 gggggtcggc aagatcttgt cggagcaggt cgtgcatttc gtccaggcgc tgcgccggga
     2341 ggatctgttc aaggcgccag gggtcgccga aacgctcgac tgggcggccg cgctcgccga
     2401 gctcgacgtg gcggcgctcg atcccgcgac cgtctctgac acgctcggcg tattgctcaa
     2461 atatcaggac gacatcgcgc gcatccaagg cggcaaggtg aaggacctca tcgacgaggt
     2521 gcgcgcacag ctgcgcgccg ctgagtaacg ggcgccgcaa gcgcacgggc ggaaacgcta
     2581 tgcatccatt cgtgacaatt gcccctcggc cggtgctcgc gccggaggac gtccgcggcg
     2641 ccgcggccgc gggcaacgcg gcgcagcgcc ctgccgggcg cctggccgaa aacatcgtcc
     2701 acttcgcgcg c
//
LOCUS       DATCWM010000330         9816 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_229353, whole genome shotgun sequence.
ACCESSION   DATCWM010000330 DATCWM010000000
VERSION     DATCWM010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9816
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_229353"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1069
                     /locus_tag="VIQ50_06240"
     CDS             <1..1069
                     /locus_tag="VIQ50_06240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008143206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEY9360015.1"
                     /translation="AFSFHMSGTEAVMQAVRLARYHTRRTHLVRFCGAYHGWWGDVQP
                     GIGNPLPARETYTLKEMSDDSLHVLRTRRDIACVLVNPLQALHPNAQAPSDSSLLDGA
                     RGAHFDKEAYADWLKRLRAVCTEQNIVLIFDEVFVGFRLAMGGAQEYFGVRADLVTYG
                     KTLGGGLPVGAVCGRKDLMKRFRDDRPADICFARGTFNSHPYVMAAMNEFLRYLETPP
                     AHELYRDAEPTWNARTRHLNQRLREEALPVEVANLGSIWTVCYLRPSRYNWMLQYYLR
                     AEGLALSWIGTGRLIFSLNYTDADFQAVADRFVAAARAMEQDGWWWHPPAATNKSIKR
                     RILKEMIAHRLSPKGDDAAPR"
     gene            complement(1087..1758)
                     /locus_tag="VIQ50_06245"
     CDS             complement(1087..1758)
                     /locus_tag="VIQ50_06245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010682391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360016.1"
                     /translation="MRRFLETLRVQRWDDHRYYHHSRMNQSLHLVSAVSFLFAYAMVF
                     QDPALAALIGWLLAMTSRQLGHFFFEPKDYDVVNQATHEYKEEIKVGYNLQRKIVLMT
                     IWVLSPLPLYFDPTFFGIFEPHATTMEFVRHMAQIWLVIGIGGLLFRTVQLFFVKDVE
                     TGLVWATKILTDPFHDIKLYYKAPFALLRGEWIDPRHAQGDEWAGEDGAEWTDEDAVE
                     APHPG"
     gene            complement(1883..2584)
                     /locus_tag="VIQ50_06250"
     CDS             complement(1883..2584)
                     /locus_tag="VIQ50_06250"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY9360017.1"
                     /translation="MTDLQHAELDKDTIAKAYARWAPVYDLVFGAVFERGRHAAIAAA
                     ESIGGRILEVGVGTGISLPDYSRGNRVCGVDISEPMLRKAQQRVDELGLTNVEGLWVM
                     DAEHLSFPDASFDVVVAQYVVTTVPNPEATLDEFARVLKPGGEIVLVSRVGAEAGLRR
                     ALERWFAPAARKLGWRTEFAWERYAHWAAQCHGMRLIERRAMPPFGHFSLIRFAKTGT
                     ATPARAGKPSARAAA"
     gene            complement(2771..3838)
                     /locus_tag="VIQ50_06255"
     CDS             complement(2771..3838)
                     /locus_tag="VIQ50_06255"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HEY9360018.1"
                     /translation="MRVLIATDAWHPQVNGVVRTLTSLSQSARRLGVSVEFLTPEGFS
                     DFQVPTYPGLRLALPRAREIARRIETAQPDAIHIATEGPIGYMVRAYCRKRGRPFTTS
                     YTTRFPEYISARVPVPQAWIYSALRRFHAAATVTMVATPSLMTELAQRGFANLGMWTR
                     GVDTDLFRPDRAADLDFARPIFVTMGRLAVEKNLEAFLSLDLPGTKVVIGTGPQEAAL
                     KRRFPDAKFLGLLENGALTAHLAASDVFVFPSRTDTFGVVQLEALACGLPVAAFPVTG
                     PKDVVGDHPVGVLNDDLRVAALEALKISRQACRALALERSWENSARQFIGHVQKVATG
                     ASCRPEGGIAMATSHARLMCT"
     gene            4076..5107
                     /locus_tag="VIQ50_06260"
     CDS             4076..5107
                     /locus_tag="VIQ50_06260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhN family protein"
                     /protein_id="HEY9360019.1"
                     /translation="MTSVITRAIRKRLDWNAIGIAISVLIVTIAVVILVRLLRDVDVD
                     KVIDALRAKSIEQISIAGAFVAVAYLALTFYDFFALRTIGRGAVPYRVAALASFTAYT
                     IGHNLGATVFTAGVIRLRIYSAWGLNIIDIAKIAFVTGLTFWLGNAFVLGAGMAYAPA
                     AASAVNQLPPWVNRTIGVAGLMTIVAYLLWLMPRRRLIGRSSWQIALPSPRSTLLQIG
                     IGIWDLGAGAIAVYALLPDYPAVDFTVLLVVFVIAILLGFVSHAPGSLGVIEATMLVG
                     LPEFPKEELLASLLIFRFLYFIVPLSFAAILLGLRELRFIAGSAATVGERKDRWLRKR
                     APSDCDRTY"
     gene            complement(5175..5363)
                     /locus_tag="VIQ50_06265"
     CDS             complement(5175..5363)
                     /locus_tag="VIQ50_06265"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEY9360020.1"
                     /translation="MNDVVKVVTYVTDVRNLPEAGKCRTEALGGAPQPVHTFLNINQL
                     AWPGMLVEVDVIAATASP"
     gene            complement(5398..5625)
                     /locus_tag="VIQ50_06270"
     CDS             complement(5398..5625)
                     /locus_tag="VIQ50_06270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360021.1"
                     /translation="MTVAQAQTPGASSSDFEKKNYNYSEWTKGLFSEVVTVTHPGKMI
                     FLAGVGAEDESGGRGTIRHLGDFAGVPLCLR"
     gene            5957..7209
                     /locus_tag="VIQ50_06275"
                     /pseudo
     CDS             5957..7209
                     /locus_tag="VIQ50_06275"
                     /inference="COORDINATES: protein motif:HMM:NF014218.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytosine permease"
     gene            complement(7235..7588)
                     /locus_tag="VIQ50_06280"
     CDS             complement(7235..7588)
                     /locus_tag="VIQ50_06280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360022.1"
                     /translation="MKGRTSVALLACMVSLAGCAGPAEVLFNNSIVVDHLDGNYQRLA
                     TCTYEHLPRQYAQLSMTDLRERQTVRIALTQAPLTHWELSFVDEEGGRQTRLESTSGS
                     YPSEHALALARACAA"
     gene            complement(7795..8409)
                     /locus_tag="VIQ50_06285"
     CDS             complement(7795..8409)
                     /locus_tag="VIQ50_06285"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013216080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY9360023.1"
                     /translation="MADLASRIVGHYEKHALVWDADRQNSDWNDKIWHDRFLGRLGKG
                     AKVLDLGCGSGRPVAQHMAELGLRVTGVDSSPTMISLCRERLPDQEWIVADMRQLALG
                     RCFDGILAWDSFFHLSHDDQRRMLPIFADHAVAGTVLMFNTGPQHGEAVGEYNGDPLY
                     HASLSPVEYEALVGRLGFDVIQHASNDAAAGGRTVWLCQRRALR"
     gene            8716..>9816
                     /locus_tag="VIQ50_06290"
     CDS             8716..>9816
                     /locus_tag="VIQ50_06290"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY9360024.1"
                     /translation="MVERQWIGGSCPNVACLPTKNEIWSARVGHLARQGAQFGVVTGP
                     VTTDMAQVRQRKRDMVQREIDFHLQTYKATGTELILGSGRFVAPKTLEVRLNDGGTRV
                     LAGDRVYLNVGTRAAIPDIPGLEAARPLTHVEALELDDLPAHLIVLGGGYVGLELAQA
                     YRRFGSRVTVIEHGPQLMSREDNDVTNEMQRLLAAEGIQFLLSATTANVHGRSADKVS
                     VTVRTSSGEQKIDGSHLLVAAGRIPNTQGIGLEDTGVVLDARGYIRVNERLETTAPDV
                     WAMGDCAGSPQFTHVAGDDFRIVRDNLAGEKRSTRDRLVPYCMFTDPPLAHVGLSERD
                     AQRDGIAVRVAKLPMSAVLRTEATDETQGFMKA"
BASE COUNT         1809 a         3082 c         3036 g         1889 t
ORIGIN      
        1 cgcgttttcc tttcatatgt ccggcaccga ggccgtcatg caggcggtcc ggcttgcccg
       61 ctatcacacg cggcgcacgc acctggtgcg cttctgcggc gcttatcacg gctggtgggg
      121 tgacgtgcag ccgggcatcg gcaacccgtt gccggcgcgc gagacctaca cgctgaaaga
      181 gatgtcggac gattcgctgc acgtcctgcg cacgcggcgc gacatcgcct gcgtgctcgt
      241 caatccattg caggcgctgc atcccaacgc gcaggcgccg agcgactcct ccctgctcga
      301 cggcgcgcgc ggcgcgcact tcgacaaaga agcctatgcc gattggctca aacgcctgcg
      361 cgccgtttgc accgagcaaa atatcgtcct catcttcgat gaagtattcg tcgggttccg
      421 cctcgccatg ggcggggcgc aggaatattt cggggtgcgg gccgatctcg tcacctacgg
      481 caagacactc ggcggcgggc tccccgtcgg cgccgtctgc ggacgcaagg atttgatgaa
      541 gcgcttccgc gacgatcgcc cggccgacat ctgcttcgcc cgcggcacgt tcaactcgca
      601 cccttatgtc atggcggcga tgaacgagtt cctgcgctat ctcgagacgc cgcccgccca
      661 cgagctctat cgcgacgccg agccaacgtg gaatgcccgc acacggcatt tgaaccagcg
      721 actgcgcgag gaagcgctgc cggtcgaggt cgccaacttg ggctcgatct ggacggtgtg
      781 ttacctgcgg ccgtcgcgct acaattggat gctgcaatac tatctgcggg ccgagggcct
      841 ggcgctcagc tggatcggaa ccggccgact cattttcagc ctgaactaca ccgacgccga
      901 cttccaagcg gttgccgatc gcttcgtggc cgcggcaagg gccatggagc aggatggctg
      961 gtggtggcac ccgccggcgg caaccaacaa gtcgatcaag cgccgcatct tgaaggaaat
     1021 gatcgcgcac cggctgtcgc cgaagggcga tgatgccgcg ccgcgctgag cgctttgcgg
     1081 cggacatcag ccggggtgcg gagcctccac ggcatcctcg tcggtccact ctgcgccatc
     1141 ctcgccggcc cactcgtcgc cctgcgcgtg gcgcgggtcg atccattcgc cgcgcagcag
     1201 agcgaacgga gccttgtagt agagcttgat gtcgtggaag gggtcggtca ggattttcgt
     1261 ggcccagacc aaaccggtct ccacgtcctt gacgaagaac aattgaacgg tccggaacaa
     1321 caggccgccg atgccgatga cgagccagat ttgcgccatg tggcgcacga attccatggt
     1381 ggtcgcgtgc ggctcaaaga tgccgaaaaa ggtggggtcg aagtagagcg gcaaaggcga
     1441 cagcacccag atcgtcatca gaacgatctt gcgctgaaga ttgtagccga ccttgatttc
     1501 ctccttgtac tcgtgggtcg cttgattcac cacgtcgtaa tctttcggct cgaagaagaa
     1561 gtgaccgagc tggcggctgg tcatggccag gagccagccg atcaacgccg ccaacgccgg
     1621 gtcctggaac accatcgcgt aggcaaagag aaagcttacg gcgctcacca agtgcagcga
     1681 ttggttcatc cggctatgat ggtaatagcg atgatcgtcc caccgctgca ctctcagggt
     1741 ttcgagaaag cgccgcatat cagctctccg tgttgcactt ggatgtcgat gctgtgtcga
     1801 ggctatggcg attcgatgaa tccggtgtga caggcgcgac tatgccgccg ggggtcggcg
     1861 gcatgctcac cgagggaagt ggtcaagcag cggcgcgcgc tgaaggcttg cccgcccgcg
     1921 ccggggtcgc tgtcccggtc ttggcgaagc gaatcaagga gaagtgtccg aagggcggca
     1981 ttgcccggcg ctcaatgagc cgcatgccat ggcactgcgc ggcccaatgc gcgtagcgct
     2041 cccaggcgaa ctccgtgcgc cagccgagtt tgcgcgccgc tggcgcaaac catcgctcca
     2101 aggcgcggcg caaacccgct tccgccccga cccggctcac cagcacgatc tcaccgcccg
     2161 gttttaacac ccgcgcgaat tcatcgagcg tcgcctcggg gtttgggacc gtcgtgacga
     2221 cgtattgcgc gacgactacg tcgaacgacg catccggaaa cgacagatgc tcggcatcca
     2281 tgacccagag cccctcgacg ttggtcagcc cgagttcgtc gacgcgctgc tgcgccttgc
     2341 gcaacatggg ctcggagata tcgacgccgc aaacacggtt gccgcgcgaa tagtcgggaa
     2401 gcgatatgcc ggtcccgact cccacctcga ggatgcgccc accgatgctt tcggcggccg
     2461 cgatcgcggc atgtcgcccg cgctcgaaaa cagcgccgaa cacgaggtca tagacgggtg
     2521 cccatcgcgc atacgccttg gcgatggtgt ccttgtcgag ttccgcatgt tgcaggtcag
     2581 tcatggcatt ctctcttcct tttgccgcac tcctggtacc agagagttcg ttagcccatt
     2641 ttattttgaa gcatcaacac gccgcgccgt cggcgcgttc ccctccccga ccaaaccccg
     2701 gcttatcggt ttttgcgagg ctccgaccga tttcgccgct cgcgttgatt caacctcccc
     2761 ggcatccgct ctacgtgcac atcagccgtg cgtgggatgt tgccatcgca attcccccct
     2821 cgggccggca cgaggcgccc gtggccactt tctggacatg cccgatgaat tgacgcgcgc
     2881 tattttccca ggaacgctcg agcgccaacg cgcggcatgc ctgccgggag attttcaacg
     2941 cctcgagagc ggccacgcgc agatcgtcgt tcaagacgcc gacggggtga tcgccgacga
     3001 cgtccttcgg accggtgacc gggaaggcgg cgaccggaag gccgcacgcg agcgcttcga
     3061 gctggacgac accgaacgtg tcggtccggc tcgggaacac gaacacgtcg gaagccgcga
     3121 gatgcgccgt caatgcgcca ttctccagca gtccgagaaa ctttgcgtcg ggaaagcgcc
     3181 gcttcaacgc cgcctcctgc gggcccgtgc cgatgaccac cttcgtgccg ggcaagtcga
     3241 gtgacagaaa tgcttcgagg ttcttttcga ccgcgagccg tcccatggtg acgaagatcg
     3301 ggcgcgcaaa gtcgagatcg gccgcacgat cgggccggaa caggtcggta tccacgccgc
     3361 gcgtccacat tccaagattg gcaaatcccc gctgcgccaa ttccgtcatg agcgacggcg
     3421 tggcaaccat ggtcacggtc gcagcggcat gaaaccgtcg caaggccgag tagatccacg
     3481 cttgcgggac cggtacgcgc gcggaaatgt attccgggaa tcgtgtcgta tagctggtgg
     3541 tgaaggggcg gccgcgcttt cggcaatagg cccgcaccat gtaaccgatc ggcccttcgg
     3601 ttgcgatatg gatcgcatcg ggctgggccg tttcgatgcg ccgggcgatc tcgcgcgcgc
     3661 gcggcaacgc caagcgcaac cccggatagg tcggcacctg aaagtccgaa aacccttccg
     3721 gcgtgaggaa ttcgacgctg acgccgagcc gtcgcgcgct ctgcgacagc gaggtcaagg
     3781 tgcgcaccac cccgtttacc tgcggatgcc aagcgtctgt tgcgatcaga acccgcatca
     3841 gactgctctc ggtcgggatg gctgagccac cgcattggcg aatcgcataa acgacaacat
     3901 tgcgatttca tatttcagcc atatgacggt gcccggaacg gggcgaggaa actcgggcaa
     3961 attttgcgac ggttcgatct acggcttgta acagcaatgt tacaaaggca tgcgagattg
     4021 gctgcgcgat tcgccggtcc gcgtcgacgc tcatcgcccg gagtccatgc caaacgtgac
     4081 gagcgtcatc acgcgggcta tacgaaagcg actcgactgg aacgcgatcg gcatcgcgat
     4141 cagcgtgctg atcgtgacga ttgccgtcgt catcttggtc cggctgctgc gcgacgtcga
     4201 cgtcgacaag gtcatcgacg cgctgcgggc aaaatcgatc gaacagatct cgattgccgg
     4261 cgccttcgtc gcggtggcgt acctcgcgct gacgttttat gatttctttg cactacgcac
     4321 gatcggccgc ggtgcggtgc cttatcgcgt cgcggcgctc gcgagcttta ccgcctacac
     4381 gatcgggcac aatctcggcg ccaccgtctt caccgccggg gtgatcaggc ttcgcatcta
     4441 ttcggcctgg ggcctcaata tcatcgacat cgccaagatc gccttcgtca ccggactgac
     4501 gttctggctc ggcaacgcgt tcgtgctcgg cgccggcatg gcctatgcgc ccgcggccgc
     4561 gagcgcggtc aaccagctgc cgccgtgggt caaccggacg ataggcgttg ccggcttgat
     4621 gaccatcgtg gcctacctcc tgtggctgat gccgcgccgg cgcctcatcg gccgctccag
     4681 ttggcaaatc gcgctgccga gcccgcgctc gacgctgctg cagatcggga tcgggatttg
     4741 ggatctcggc gcgggagcga tcgcggtgta cgccttgctc ccggactatc ctgcggtcga
     4801 tttcaccgtc ttgctcgtgg tgttcgtcat agcgatcctg ctcggcttcg tgagccacgc
     4861 gcctggaagc ctcggggtga tcgaggcgac gatgttggtc gggcttccag agtttcccaa
     4921 ggaggaactg ctggcatcgc tgctgatctt ccgctttctc tacttcattg tcccgctttc
     4981 attcgcggcc atcctgctcg gcttgcgcga actgcgcttt attgccggat cggcggccac
     5041 ggtcggcgag cgaaaggaca ggtggcttcg aaaacgcgcg ccatccgatt gcgaccgaac
     5101 gtactagaga gagcggggac gcattaaccc ccagacgtcg ggtttcgggc gaagcggaaa
     5161 cagccctcgg gaagttaagg cgacgcagta gctgcgatca catccacttc caccagcatg
     5221 cccggccatg cgagctgatt gatgttcagg aatgtgtgca cgggctgcgg agccccaccc
     5281 agtgcttctg tgcggcactt tcccgcctcc gggagatttc taacgtcagt gacgtaggtg
     5341 acgaccttca ccacgtcgtt catcgtggcg ccgtgggccg ccaacagccg cttgatctta
     5401 tcgtaggcat agcggcaccc ccgcgaagtc gccgagatgc cggatcgtgc cgcggccgcc
     5461 gctctcgtcc tcggctccca ccccggcgag aaagatcatc ttgcctggat gcgtgacggt
     5521 aacgacctcg gagaacagcc cttttgtcca ctcactgtaa ttgtagtttt tcttttcaaa
     5581 gtccgaagaa cttgcgcctg gcgtttgcgc ctgcgcaact gtcaccgtcg aaagcaggag
     5641 tgcagagcaa gttgcagcaa atcctcgcac gggtcacctc cagattaccg gccttccgaa
     5701 gacaacacga agcctagaac gaggtagtga ccgggtcaaa caagcaccgc cttcgacagc
     5761 caacgttgct gtgatgcaca aacgtgcaac ccgtatggta ggatggggac gcacaaaatt
     5821 gcccatgact tccgcaatcg acatcgagcg ccgcctgcgc gagcgctacc gtcagcccgc
     5881 cggcgtcgag cagttcggca tcgaaccagt tccggaagag cgcaagacgg ccggctggtt
     5941 cgatctcttc agcatcatgt tcaacttcct gatcaacccc ggcatcatgc tgagcggggg
     6001 cctgatggtg gcggccgggc tatcgttcca ggccgcgctg gcggccgggt tttttggaac
     6061 catcgttgca ctggtcttct atctgatcat ggcgacgctg ggggtcgatt acgggatccc
     6121 tggtcaggtc gcgacccgcg tcgtgtatgg gctgcgggga gcaaagctga tcccctcgct
     6181 gttgcggaca ctagtgtcga tctactggtt ctcgtccaga cccttgtcgg cgcatcggcc
     6241 atcgtcgcgg tgctcgcgaa aatgaccggc accacctatc cgctggtctg ggtcagcgtg
     6301 atctttgggt tgatccaggc gtgcgtcgcg gtgatcggct tcgggtcact caaggtgctg
     6361 gcgcgtgtcg cattgccgat caaggtcatg gtgttggcct atctgtttgt tctgttcgcg
     6421 cgtcatgacg atccgaattt cgagcttgcc aaagtgctgt cctacccaag cgccagcggc
     6481 tggacctggg tgttgctggc gggctggctg aacgtcacga ttgcgggttg gctgaccaac
     6541 attaccgatg cggcggattt cgcccgctat acgcgctcgc gcaccgacat gtgggttggc
     6601 accttcgccg ccggcgcgct cggagcgctg ctgtccaccg ccctcggcgc gtatggggcc
     6661 gccgcaaccc tcggcaaagt caccaatccc ttcgtgctga ccgcccaaat cgaaaccagc
     6721 tgggtcgctt tcgtggttgt gctggtattc ctctgtgtcg acgactggac catcaacgtg
     6781 ctcaatcttt attcggcagg gctgtcgctt tccaacatgt tcgaacggct tggccggttc
     6841 tggaccacgc tgatcgccag cgtgttgggg gtcgcgttgt gtggagatcc cgatgtgctg
     6901 aacttttttc aatacgtcag catgtttgga aacgtgtttt ccccggtcgc aggcgtgctt
     6961 gtgttcgatt acctgttcgt gcgccgcatg cagattgacg tcgcggcgct ctacgacccg
     7021 aaaggccgct accgctactg ggtcggcttc aatccgatcg cagtcgcctg gacggcgttt
     7081 ggcttcctga tctgcaccta cgtcatcccg accgcacgga ttccagtctt gctcacgctg
     7141 ctgatcacgg gtgtcggtta cctgctgacc gtttggatca tgcagcgcgc caagatgcgc
     7201 gatctgtagg ccgtgtcccc ctccccggcg cgacttatgc cgcacacgcg cgagccaatg
     7261 cgagcgcatg ctcgcttggg taagagcctg acgtcgattc cagccgcgtc tgcctgccac
     7321 cctcttcatc gacgaacgag agttcccagt gtgttagcgg cgcctgggtc aaagcaattc
     7381 tgaccgtttg ccgttcgcgc aaatcggtca tcgataactg agcgtattgc cgagggaggt
     7441 gctcataggt gcaggtcgca aggcgctgat agttgccgtc gagatggtcg acgacgatgg
     7501 agttgttgaa aaggacctcg gcaggaccgg cacagccggc aagactgacc atgcaagcca
     7561 ggagcgccac agaggtccgg cccttcatcg tgctgccgtt cggttctccg cacgatattt
     7621 ccgccgccaa aggtcaaaac caggttaacg aagcaaatgc gacataggcg attgccgcgt
     7681 agcgcttgtc cttcctgaga tatttgttcc tcgccggcgg cggccgactt gccctcgcct
     7741 tgagccgcgc aagagcagac attcaacgac gtcgcataga gccggaaggc gacatcagcg
     7801 cagcgcacga cgttgacaaa gccacaccgt tcgtcctcct gcggcggcat cgttcgaggc
     7861 gtgttggatc acatcaaatc cgagacgccc gacgagcgct tcatattcca ctggcgagag
     7921 acttgcgtga tagaggggat cgccgttgta ttcgcccacg gcctcgccgt gctgtggccc
     7981 cgtattgaac atcaataccg tgccggcaac agcatggtcg gcgaatatcg gtaacattcg
     8041 ccgttggtca tcatgactca ggtgaaagaa gctgtcccaa gcgagtatgc catcgaagca
     8101 ccggccgagc gctaactggc gcatgtcggc aacaatccat tcttgatcgg gcagacgctc
     8161 acggcaaagc gaaatcatgg tcggcgagga atcgacgcct gtcacgcgca atcccagttc
     8221 agccatgtgc tgcgcgaccg gtcgccctga gccacagcca aggtccagca ccttggcgcc
     8281 tttgccaagt ctgccgagga aacggtcatg ccaaattttg tcgttccagt cgctgttttg
     8341 acgatcggca tcccatacga gggcgtgctt ctcgtaatgt ccgacgatcc tgctggcgag
     8401 atcagccatc acgctgctga aagtgggtcg ctttgccagg tctcgcaacg ggtctacggc
     8461 ggcgagaggc gttgcaagcc aggaaagcct gcctcgacga gtacattccg acctgcgcaa
     8521 gaccgataaa gtcagagcaa tccaactcaa ttcatctcgg cacggatcgc cttagatggc
     8581 ggcaggccgg gggcagagcg gacaaggagg gacacgcatg gctcagcggg aacaatttga
     8641 catcctcgtc ctcggcagcg gaaagagcgg caagttgctg gcttggcact ggcgcaatcg
     8701 gggcggcgga ccgccgtggt cgagcgtcag tggatcggcg ggtcttgccc caacgtcgcc
     8761 tgcctcccca ccaagaacga gatttggagc gcgagggtcg ggcatctggc gcgacaaggc
     8821 gcgcagtttg gcgtagtgac cggcccggtc acgaccgaca tggcgcaagt tcgccaacga
     8881 aagcgcgaca tggtccagcg cgaaatcgac tttcatctgc agacctacaa ggcgaccggc
     8941 accgaattga tcctggggag cgggcgcttc gtggcgccaa agacgctgga ggtgcggctc
     9001 aacgacggcg gcacgcgcgt ccttgccggt gatcgggtgt acctcaacgt cggaacgcgt
     9061 gcggcaattc cggacattcc cggtctcgag gcggcccggc cgctcaccca cgtcgaagcg
     9121 ctcgaactcg atgacctccc ggcgcatctg atcgtgctcg ggggcggcta tgtcgggctc
     9181 gaactggcgc aggcttaccg ccgtttcggc agccgcgtga cggtcatcga gcatgggcct
     9241 cagctgatga gccgcgagga taatgacgtg accaatgaga tgcagcggct cctcgccgcg
     9301 gaaggcatcc aattcctgtt gtcggccacg accgctaacg tgcatggacg gtccgcagac
     9361 aaggtcagcg tcaccgtgcg cacgtcatcc ggcgaacaaa agatcgacgg cagccatctc
     9421 ctggtcgcgg cgggacgcat tccgaacacg caggggatcg ggctcgagga taccggggtc
     9481 gtgttggatg ctcgcggtta cattcgcgtc aatgagcggc tggagaccac cgcgcccgac
     9541 gtgtgggcca tgggcgactg cgccggcagc ccgcaattca ctcatgtcgc cggggatgac
     9601 ttccgcatcg tcagggacaa cctggccgga gaaaagcgca gcacgcgcga ccggctcgtg
     9661 ccctattgca tgttcaccga tccgccgctc gcgcacgtgg gactgagcga acgcgacgca
     9721 cagcgcgacg gcatcgcggt gcgagtcgcg aagctgccga tgagtgccgt gttgcgaacg
     9781 gaggcgacgg acgagacgca aggtttcatg aaagcc
//
LOCUS       DATCWM010000331         2220 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_434478, whole genome shotgun sequence.
ACCESSION   DATCWM010000331 DATCWM010000000
VERSION     DATCWM010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2220
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_434478"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..410)
                     /locus_tag="VIQ50_06295"
     CDS             complement(<1..410)
                     /locus_tag="VIQ50_06295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007608249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1259 domain-containing protein"
                     /protein_id="HEY9360025.1"
                     /translation="MRAVYVLAICAVATIGGAAKAQEIDWKKVDEAIGRSAAAISGDV
                     HRYGFPRSDLTVTLDGVTIRPALALGGWTAFKPAHGGAMVMGDLVLLDTEINPVMAKL
                     IENGIEITAVHNHVLRANPATYYMHISGHGDPVKL"
     gene            complement(423..1055)
                     /locus_tag="VIQ50_06300"
     CDS             complement(423..1055)
                     /locus_tag="VIQ50_06300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012385484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-Mn family superoxide dismutase"
                     /protein_id="HEY9360026.1"
                     /translation="MAYQIKPLSCDPANIKGMSERLIVSHYENNYCGAVKRLNLIEEQ
                     LAELDYAKAAGFLINGIKREQLIAMNSMILHELFFDGLGEQSEPSGALRNALARDFGS
                     LERWRAEFVAMGKALGGGSGWVLLSWSPRDRKLVNQWASDHCHTLAGGTPILALDMYE
                     HSYHIDFGAKAASYVDTFMDAIRWTNVERVFGQMTGDRGMAGETRLMRST"
     gene            complement(1090..>2220)
                     /locus_tag="VIQ50_06305"
     CDS             complement(1090..>2220)
                     /locus_tag="VIQ50_06305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate transporter"
                     /protein_id="HEY9360027.1"
                     /translation="GGIIAGGLFVVPGIIAIMALSYVYAGWGNVPVIVALFFGLKAAV
                     LAIVLEAGFRIGRRALKNRVMIGLAALAFIGIFFFNVPFPIIVFGAACIGFVGGVLGL
                     AAFQASNGHGPGGTGRPAVVDAMLGEEIPEHARPTVARALAVSAIWLALWLIPVIALL
                     VTLGSANVFSQIAVFFSKMAVVTFGGAYAVLAYVAQQAVEHYGWLKPGEMLDGLGMAE
                     TTPGPLIMVLQFVGFMAAYREPGTLPPMLAGTLGGLLATWVTFTPCFLWIFLGAPFVE
                     KLRGNKPLNAALSAITAAVVGVILNLAIWFAIHTVFRETVPVRMFPLSFDAPRLASVN
                     WFALGLSIAAAVAIFRFKVGMIPTLAACCIAGMLLYLLGATS"
BASE COUNT          444 a          704 c          698 g          374 t
ORIGIN      
        1 agcttcaccg gatcgccatg cccgctgatg tgcatgtagt acgtcgcggg attggcgcgc
       61 agcacgtggt tgtggaccgc ggtgatctcg atgccgttct cgatcagctt agccatgacc
      121 gggttgatct cggtgtcgag cagcacgagg tcgcccatga ccatcgcccc gccgtgggcc
      181 ggcttgaatg cggtccagcc gccgagcgcc aaggccgggc ggatggtgac gccgtcgagc
      241 gtcaccgtga ggtcgctgcg cggaaagccg tagcggtgaa cgtcgccgga gatggcggct
      301 gcgctccttc caatcgcttc atcgactttc ttccagtcga tctcctgcgc cttggcggcg
      361 ccgccgattg ttgccacggc acaaatcgca agcacgtaaa cagcacgcat gatgacgtcc
      421 tcctaggttg acctcattag ccttgtctcg cccgccatcc ctcgatcacc tgtcatttgc
      481 ccaaatactc gctccacgtt ggtccagcga atggcgtcca tgaaagtgtc gacgtagctc
      541 gcggccttgg cgccgaagtc gatgtgatag gagtgctcgt acatatcgag cgcgagaatg
      601 ggcgtgccgc ccgccaaggt gtggcaatgg tccgacgccc attggttgac gagcttgcgg
      661 tcgcgcggcg accacgacaa cagcacccat ccggagccgc cgccgagcgc cttgcccatc
      721 gccacgaact ccgcgcgcca gcgctccaac gatccgaaat cccgcgccag cgcgttgcgc
      781 agcgctccac taggttcgct ttgctcgccg agcccgtcga agaacagctc atgcaggatc
      841 atggagttca tcgcgatgag ctgctcgcgc ttgataccgt tgataagaaa gccggcagcc
      901 ttggcgtaat cgagctcggc gagctgttcc tcgatcaggt tgaggcgttt gacggcgccg
      961 cagtagttat tctcgtaatg gctgacgatc agccgctcgg acatgccttt aatgttggct
     1021 gggtcgcaag acagaggctt gatttggtac gccatcagcg atcctccgtc gcaaatgttg
     1081 ctcggctgct catgaggttg cgcccagcag gtaaagaagc attcccgcaa tgcaacacgc
     1141 cgcgagcgtc gggatcattc cgaccttgaa ccggaagatc gcgacggcgg cggcgatcga
     1201 aagcccgagc gcaaaccaat tcacgctggc cagcctcggc gcatcgaatg acaacgggaa
     1261 catgcgtacc ggcacggtct cacggaagac ggtgtggatg gcaaaccaga tcgcgaggtt
     1321 caagatcacg ccgaccaccg ccgccgtgat ggcggagagc gccgcgttga gcggcttgtt
     1381 gccgcgcagc ttctcgacga acggcgcccc gagaaaaatc cagagaaagc acggggtgaa
     1441 ggtgacccag gtcgcgagca ggccgcccag cgtcccggcg agcatgggcg gaagcgttcc
     1501 cggctcgcgg taggctgcca tgaagcccac gaactgcagc accatgatca gcgggcccgg
     1561 cgtcgtctcc gccatgccga gtccgtcgag catctcgcca ggcttgagcc agccgtaatg
     1621 ttcgaccgcc tgctgcgcga cataggcgag caccgcatag gcgccgccga acgtcaccac
     1681 cgccatcttg ctgaagaaca cggcgatctg gctgaagacg ttggcgctgc cgagcgtgac
     1741 cagcagtgcg atgaccggga tgagccagag tgcgagccaa atggccgaaa cggccaacgc
     1801 gcgcgcgacg gtgggacggg cgtgttctgg tatctcctcg ccgagcatgg cgtcgacgac
     1861 agccggcctg cctgtgccgc ccgggccatg cccgttgctg gcttgaaaag cggcaaggcc
     1921 gagcacaccg ccaacgaagc cgatgcaagc tgcgccgaaa acgatgatgg ggaacgggac
     1981 gttgaagaaa aatatgccga tgaaggcgag cgctgcgagc ccaatcatga cgcggttctt
     2041 gagcgcgcgt ctcccaatcc gaaagccggc ttccagtacg atcgccagaa cggccgcttt
     2101 gagcccgaag aacagcgcga cgatgaccgg gacgttgccc cagccggcgt acacgtagct
     2161 aagcgccatg atcgcgatga tgccgggaac gacaaacagc ccgccagcga tgatgccgcc
//
LOCUS       DATCWM010000332         3440 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_234574, whole genome shotgun sequence.
ACCESSION   DATCWM010000332 DATCWM010000000
VERSION     DATCWM010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3440)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3440)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3440
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234574"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..380
                     /locus_tag="VIQ50_06310"
     CDS             <1..380
                     /locus_tag="VIQ50_06310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HEY9360028.1"
                     /translation="WLLGQIGEFLASGTVASTPPLATQFAIIDKLYEEMLSHHGRASG
                     RRHARKHLGWALNAAAETAHASEALLKAYRARVLTAEDPAAVRHHLADAYADFGSLAA
                     ANAASTWPLKPQRTWPGGERKAA"
     gene            377..1507
                     /locus_tag="VIQ50_06315"
     CDS             377..1507
                     /locus_tag="VIQ50_06315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020178902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(II)"
                     /protein_id="HEY9360029.1"
                     /translation="MSRHEPMPTLPSGTADAVLDALPHPVIMIAADGRIANANAAAES
                     FFEASLPLLRRHLLRDLVPFGSPLLALVEQVRGRGAAVNEYKVDLGTPRNPGERLVDL
                     YVAPLPERPDHVVVMLQERTIADKMDRQLTHRGAARSVIALAAMLAHEIKNPLSGIRG
                     AAQLLEQSAADDDRTLTRLICDEADRIVKLVDRMEVFTDERPIEREAVNIHVVLEHVK
                     RLSQSGVARHIKFVEDYDPSLPPVLANRDQLIQVFLNLVKNAAEAIGDNAADGEIGLS
                     TAFRPGVRLSLPGNKTRVSLPLEFCVKDNGPGVPEDLLPHLFDPFVTTKSTGSGLGLA
                     LVSKIVGDHGGIIECESQPRRTTFRVLMPMFLGNDAEPGDAA"
     gene            1519..2961
                     /gene="ntrC"
                     /locus_tag="VIQ50_06320"
     CDS             1519..2961
                     /gene="ntrC"
                     /locus_tag="VIQ50_06320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(I)"
                     /protein_id="HEY9360030.1"
                     /translation="MPAGNILVADDDAAIRTVLNQALSRAGYEVRSTSNAATLWRWVS
                     QGEGDLVITDVVMPDENAFDLLPRIKKLRPELPVIIMSAQNTFMTAVRASERGAYEYL
                     PKPFDLKELIGIVGRALAEPKERTRPAAKPDDFESIPLVGRSPAMQEIYRVLARLMQT
                     DLTVMISGESGTGKELVARALHDYGKRRSGPFVAINMAAIPRDLIESELFGHEKGAFT
                     GANTRSSGRFEQAEGGTLFLDEIGDMPMEAQTRLLRVLQQGEYTTVGGRTPIKADVRI
                     IAATNKDLRILIQQGLFREDLFFRLNVVPLRLPPLRERLEDVPDLIRHFFAQVEREGL
                     PAKQLEQAALERLKRHRWPGNVRELENLARRLAALYPQETIAAAVIDAELSQPTMVSG
                     ADEPRAEEGLSAAVERHLTSYFASFGEALPPPGLYHRILREIEHPLLSVTLAATRGNQ
                     IRAADLLGVNRNTLRKKIRDLEIQVFRSGG"
     gene            3209..>3440
                     /locus_tag="VIQ50_06325"
     CDS             3209..>3440
                     /locus_tag="VIQ50_06325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HEY9360031.1"
                     /translation="MTSAAAPTSGWIPRALGVAAVALALLSALLTFVVLAGLTPIAPT
                     HEVVVTLLLANAGTVFLLVLVIAREVWGIVQAR"
BASE COUNT          589 a         1164 c         1107 g          580 t
ORIGIN      
        1 cgtggctgct gggacagata ggcgagtttc ttgcttcggg cacggttgcg agcacgcctc
       61 cgctcgccac gcaattcgcc atcatcgata agctctacga ggagatgctc tcgcaccacg
      121 gccgcgccag cggtcggcgc catgcgcgca agcacctcgg ctgggccctc aatgccgcgg
      181 ccgaaacggc gcacgcatcc gaggcgttgc tcaaggcata tcgcgcgcgc gtgttgaccg
      241 ccgaggatcc ggccgcagtt cgccatcact tggccgacgc ctacgccgac ttcggctccc
      301 tcgccgcggc caatgcggcc tccacctggc cgctaaagcc gcagcgcacg tggcccgggg
      361 gggagaggaa ggccgcatga gccggcatga gccgatgccc acgcttccct ccggcacggc
      421 ggatgcggtt ctcgacgcac tgccgcatcc ggtcatcatg atcgcggccg acgggcgcat
      481 cgccaatgcc aatgcggcgg cggaatcctt cttcgaggcg tcgttgccgc tgctgcgccg
      541 tcacctgctg cgcgacctgg tgccgttcgg cagcccgctg ctcgcactcg tcgagcaagt
      601 gcgtgggcgc ggcgcggcgg tcaacgaata caaggtcgat ctcggcacgc cgcgcaatcc
      661 cggcgagcgc ctggtcgacc tctatgtggc gccgctgccg gagcggccgg atcacgtggt
      721 cgtcatgctg caagagcgca cgatcgccga caagatggac cgccagctca cccatcgcgg
      781 ggcggcccgc tcggtcatcg cgctggcggc catgctcgcg cacgagatca agaatccgct
      841 ctccggcatc cgcggcgcgg cgcagttgct cgaacaatcg gccgccgacg acgatcgcac
      901 cttgacgcgg ctgatttgcg acgaagccga ccgcatcgtg aaactcgtcg accgcatgga
      961 agtattcacc gacgagcggc cgatcgagcg cgaagccgtc aacatccacg tcgtgctcga
     1021 gcacgtgaag cggctcagcc aatcgggcgt ggcgcgtcac atcaagttcg tggaggacta
     1081 cgacccttcg ctgccgccgg tactcgccaa tcgcgaccag cttatccagg tgttcctcaa
     1141 cctcgtgaag aacgccgccg aggcgatcgg cgacaacgcg gccgatggcg agatcggcct
     1201 ttcgaccgcg tttcgaccgg gcgtgcggct gtcgcttccg ggcaacaaga cgcgcgtttc
     1261 actgccgctc gaattttgcg tcaaggacaa cggacccggc gttcccgagg atctgttgcc
     1321 gcatctgttc gatccgttcg tgacgacgaa atccaccgga tccgggctcg gcctggcgct
     1381 ggtgtcgaag atcgtcggcg accacggcgg gatcatcgaa tgcgagtcgc agccgcgacg
     1441 caccaccttc cgtgtgctca tgcccatgtt cttgggtaac gacgccgagc cgggcgacgc
     1501 tgcctaaaga ggatgccaat gcccgctgga aacattctgg tcgcggacga cgacgcggcg
     1561 atccgcaccg tgctcaacca agcgctatcg cgcgcaggct atgaagtccg ctcgaccagc
     1621 aatgccgcca cgctgtggcg ctgggtcagt caaggagagg gcgatctcgt catcaccgac
     1681 gtggtgatgc cggacgagaa cgcattcgac ctcttgccgc gcatcaagaa gctgcggccg
     1741 gagcttcccg tgatcatcat gagcgcgcag aacacgttca tgaccgcggt gcgggcgtcg
     1801 gagcgcggcg cctacgaata tttgccgaag ccgttcgatc tcaaggagct gatcggcatc
     1861 gtggggcgcg cgctggcgga gccgaaggaa cgcacgcgcc cggccgccaa gccggacgac
     1921 ttcgaatcca tccccctcgt cggccgctcg ccggcgatgc aggaaatcta tcgcgtgctc
     1981 gcccgcttga tgcagaccga tctcaccgtg atgatttccg gcgagtcggg aaccggcaag
     2041 gagctggttg cgcgggcgct gcacgattac ggcaaacgcc gcagcggacc gttcgtggcc
     2101 atcaacatgg cggcgatccc gcgcgatctc atcgagtctg aactgttcgg ccacgagaaa
     2161 ggtgccttta ccggcgccaa cacccgcagc tccggccgct tcgaacaggc cgaaggcggc
     2221 acgcttttcc tcgatgaaat cggcgacatg ccgatggagg cccagacacg gctgctgcgg
     2281 gtgctgcagc agggcgaata caccacggtc gggggccgca ccccgatcaa ggccgacgta
     2341 cgcatcattg ccgcaacgaa caaggatctg cgcattctca tccagcaggg gctgttccgg
     2401 gaggatctgt tcttccgcct caatgtcgtg ccgctgcgcc tgccgccgtt gcgcgaacgc
     2461 ctcgaggacg tgcccgacct gatccggcac ttcttcgccc aggtcgagcg cgaaggtctg
     2521 ccggccaagc aactcgagca ggccgcgctc gaacggctca agcggcatcg ctggccgggt
     2581 aacgtgcgcg agctcgaaaa tctcgcgcgc cgcctggccg cgctctatcc gcaggaaaca
     2641 atcgcggcgg cggtgatcga tgcggagcta tcgcagccca cgatggtatc cggcgccgac
     2701 gagccgcggg cggaggaggg cctttcggct gcggtcgaac gccacctgac gtcgtatttc
     2761 gcgagcttcg gcgaggcgct gccgccgccc ggcctctacc accgcatcct gcgcgagatc
     2821 gagcatcccc tgctctcggt gacgctcgcg gcgacgcgcg gcaaccagat ccgtgcggcg
     2881 gacttgctcg gggtcaatcg caacacgttg cgcaagaaaa tccgagatct cgagattcag
     2941 gtcttccgca gcggcggctg atccgtttct gggattctgc tcgcaagcgg gcttcctgcc
     3001 gtggtgctga tcggccacag gggcggcttt tcacgccccg gaattgtcgc aatccggcaa
     3061 cattgttgta gaaaagcatc agtgatcgag caccatcgat cagcgggggg cacctaaacg
     3121 ggcgtatttc tacgcactgt tgcaggtttc ccgtttggga cgagacgagt cgatgacgag
     3181 cgtcggccag gccgcgacca ccgagctgat gacctctgcc gccgcgccga cctcggggtg
     3241 gatcccgcgg gcgctcgggg tggccgccgt cgcgctggcg ctgctgtcgg cgctattaac
     3301 cttcgtcgtc cttgccggcc tcacccccat cgcgcccacg catgaggtcg tcgtcacgct
     3361 gctgctcgcc aacgccggca cggtctttct tctggttttg gtcatagcgc gcgaggtatg
     3421 gggcatcgtg caggcacgac
//
LOCUS       DATCWM010000333         3115 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_445258, whole genome shotgun sequence.
ACCESSION   DATCWM010000333 DATCWM010000000
VERSION     DATCWM010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3115
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_445258"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(121..2463)
                     /locus_tag="VIQ50_06330"
     CDS             complement(121..2463)
                     /locus_tag="VIQ50_06330"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEY9360032.1"
                     /translation="MATSSTQGGEVGAPISAKAGGAKVGSQIGRSLPRLEARDKVTGR
                     AEYTHTMRLPGMLHAKIFRSTVAHGRIKSIDTSAAKRVPGVHRIITAEDIRTVIPAPY
                     YGPAFHDQPILAIDKVHFVGEPVAVALAADPHVAEEAAQLIVAEYEDLPAVFDEVEAA
                     ANETLVHDELKPAGTFADLKHLKGRKGTNIALDFKLRRGDVDKAFAAAAHVFEHTFYT
                     QKVLHLPLEPFASIADWSERGVTIHTGSQGPSFVRTEIARLLGWPENRVRIKVPYLGG
                     GFGAKLYIKMEALATALSMIVRRPVKVALTMEEQFYTITRHPSTFRIKTGVDASGRIT
                     ARKCEVYWNGGAYADVGPRVTQKSGFTASGPYDIDNVWVDSYALYTNLPPAGALRGFG
                     IPQLVWAYESHTDMMARELKLDPLEFRRKNLLREGRPQATGQIVRDAKLDAVLERVAE
                     RLNWGKPLARGNGALRRGRGIAVAIKAVISPTTSVANLAIAADGSTTLYCGTVDMGQG
                     SDTAMAQIAGEVLDIPAESVHIVPRDTDVTPYDMGTLGSRSLFHMGHAVRLAAQEARE
                     KIKAMAREVGEPEGSNIPLPDLFKKRFGMQAGTILGTGTYKPDYVPPDPATGLTDNVT
                     PFWMCAASGAEVEVDTETGHVRIARLITAVDCGRPVNPKIVETQISGAVLMQLGFTMF
                     EKMHIDAGQVTNASLADYKIPAILDVPPMENETVDSYLSIGPFGAKGVGETATFCVSP
                     AIANAIEDACGVRLTALPLTPEAVFRALRTQGNAPLEDDE"
     gene            complement(2463..>3115)
                     /locus_tag="VIQ50_06335"
     CDS             complement(2463..>3115)
                     /locus_tag="VIQ50_06335"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HEY9360033.1"
                     /translation="ALLECSPEVARAAPVIPRAMRRLSNIRVRNVATIGGNLAHGDPH
                     MDLPPILIALNAKVAVVGANGAQAAERTIAVEDLFAGYFETVLAKNELIAELHIPPQG
                     KSRAAYIKVTTGSVEDWPALGVAVALEAEGSAVKSARVVVSAATEKATRLKGAERLLA
                     GATVDEKMLSRAGDAAAEEAECITDVRGSAAYKRELTRVYVGRALRQALNSNGAIR"
BASE COUNT          457 a         1009 c         1101 g          548 t
ORIGIN      
        1 cgcagctctc gcgcgcgccc atcagattga attcgcgctg cagcacctcg acgagattgt
       61 gatgcgactt gatctcggcc gcgacctgct cgccgttgag ggtgaagctg atggtacgcg
      121 tcattcgtcg tcctcgagtg gcgcgttgcc ttgcgtgcgc agcgcgcgga acacggcctc
      181 gggggtgagc ggaagcgcag tgaggcgaac gccgcaggcg tcctcgatgg cgttggcgat
      241 cgccggcgat acgcagaacg tcgcggtctc gcccacgccc ttcgccccga acggaccgat
      301 cgacagatac gagtcgacgg tctcgttctc catcggcggc acgtcgagga tcgccggaat
      361 cttgtagtcg gcgagcgagg cattggtcac ctgcccggcg tcgatgtgca tcttttcgaa
      421 catggtgaag ccgagctgca tcagcacggc gccggaaatc tgcgtctcga cgatcttcgg
      481 attgacgggg cggccgcagt cgaccgcggt gatgagccgc gcgatgcgca cgtggccggt
      541 ctcggtgtcg acctcgacct cggcgccgga ggcggcgcac atccagaacg gcgtgacgtt
      601 gtcggtgagc ccggtcgccg gatcgggcgg cacgtaatcc ggcttgtagg tcccggtgcc
      661 gagaatggtg ccggcctgca tgccgaaccg cttcttgaag aggtcgggca gcggaatgtt
      721 gctgccttcg ggctcgccga cctcgcgcgc catcgcttta atcttctcgc gcgcctcctg
      781 cgcggcaagg cgcaccgcgt ggcccatgtg aaagagcgag cgcgagccga gcgtgcccat
      841 gtcgtaaggg gtgacatcgg tgtcgcgcgg cacgatgtgc acgctctccg ccgggatgtc
      901 gagaacctcg ccggcgatct gcgccatcgc cgtgtccgag ccctggccca tgtcgacagt
      961 gccgcaatag agcgtggtgc tgccgtcggc ggcgatggcg aggttggcga ccgaggtggt
     1021 cggcgagatc accgccttga tcgccacggc gatgccgcgc ccgcggcgca gtgcgccgtt
     1081 gccgcgcgcg agcggcttgc cccagttgag ccgctcggcc acgcgctcga gcacggcatc
     1141 aagcttggca tcgcgcacga tctggccggt cgcttgcggc cggccttcgc gcaagaggtt
     1201 cttgcggcga aactcgagcg gatcgagctt gagctcgcgg gccatcatgt cggtgtggct
     1261 ctcgtaggcc cacaccagtt gcggaatgcc gaagccgcgc agcgcccccg ccggcggcag
     1321 gttggtgtag agcgcgtagg aatcaaccca cacattgtcg atgtcgtagg ggccggaggc
     1381 ggtgaagccc gacttttgcg tcacgcgcgg gccgacgtcg gcataggcgc cgccgttcca
     1441 gtacacctcg cacttgcgcg cggtgatgcg gccgctcgcg tcgacgccgg tcttgatgcg
     1501 aaacgtgctg ggatgccggg tgatggtgta gaactgctct tccatggtga gcgcgacctt
     1561 gaccggccgg cgcacgatca tggagagcgc ggtcgcgagc gcttccatct tgatgtagag
     1621 cttcgcgccg aagccgccgc cgaggtaagg caccttgatg cgcacgcggt tctccggcca
     1681 gccgagcagg cgcgcgatct cggtgcgcac gaacgacggc ccctggctgc cggtgtggat
     1741 ggtgacgccg cgttcgctcc agtcggcgat cgacgcgaac ggctcgagtg ggagatgcag
     1801 aaccttctgc gtgtagaagg tgtgctcgaa cacgtgcgcg gccgcggcga aggccttgtc
     1861 cacgtcgccg cgccgcagct tgaaatcgag cgcgatgttg gtgcccttgc ggcccttgag
     1921 atgcttgagg tcggcgaagg tgccggcggg cttgagctca tcgtgcacca gcgtctcgtt
     1981 ggccgcggcc tccacctcgt cgaacaccgc cggcaggtcc tcatactcgg cgacgatgag
     2041 ctgcgccgcc tcctcggcga cgtggggatc ggcggcgagc gcgaccgcga ccggctcgcc
     2101 gacgaagtgc accttgtcga tggcgaggat cggctggtcg tggaaggccg ggccgtaata
     2161 gggcgcggga atgaccgtgc ggatgtcctc ggcggtgatg atgcgatgga cgccgggaac
     2221 gcgctttgcc gcgctggtgt cgatcgactt gatgcggccg tgggcgacgg tgctgcggaa
     2281 gatcttggcg tgcagcatgc cgggaagccg catggtgtgc gtgtattcgg cgcgtccggt
     2341 caccttgtcg cgcgcctcga gccgcggcag cgagcgcccg atttgagagc cgactttcgc
     2401 gccaccggct ttcgcgctga tcggcgcgcc gacctctccg ccttgcgtgc tgctcgttgc
     2461 catcagcgta tggctccgtt gctgttgagc gcctggcgca gcgcccggcc gacatagacg
     2521 cgcgtgagct cgcgcttgta ggcggcagag ccgcgcacat cagtaatgca ttcggcttcc
     2581 tcggcggcgg cgtcgcccgc gcgcgagagc atcttctcgt ccacggttgc ccccgcaagc
     2641 aagcgttccg cgcccttgag acgcgtcgcc ttctcggttg cggcgctgac gacgacccgt
     2701 gcggacttga cggcgctccc ttcggcctcg agcgccaccg cgacgccgag cgcgggccaa
     2761 tcctcgaccg agccggtggt gaccttgata taggccgcgc gcgatttccc ttgcggcggg
     2821 atgtggagtt ccgcgatcag ctcgttcttc gccagcaccg tttcgaaata gccggcgaac
     2881 aggtcttcga ccgcgatcgt gcgctcggcc gcctgcgcgc cattggctcc gaccaccgca
     2941 actttggcgt tgagcgcgat aagaatcggc ggcaagtcca tgtgcggatc gccgtgcgcc
     3001 agattgccgc cgatagtcgc gacgttgcgc acgcggatgt tggaaagccg ccgcatcgcg
     3061 cgcggaatga cgggggcggc gcgcgccacc tcgggcgaac actcgaggag cgcga
//
LOCUS       DATCWM010000334        14161 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_18742, whole genome shotgun sequence.
ACCESSION   DATCWM010000334 DATCWM010000000
VERSION     DATCWM010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 14161)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14161)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14161
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18742"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1537..1932)
                     /locus_tag="VIQ50_06340"
     CDS             complement(1537..1932)
                     /locus_tag="VIQ50_06340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360034.1"
                     /translation="MCDYSLMHVKSRPASVGAKLRTTNFGTGTRGFAAPSDPGTAVCV
                     LPGTELAFDSEIAVYGACGPTKHQTAIFRQINRDQPHMHHDALELPDGQTLLLTFLCE
                     GQEATVLQLPAKPTTKEEAQAQERVRVAG"
     gene            complement(2166..2729)
                     /locus_tag="VIQ50_06345"
     CDS             complement(2166..2729)
                     /locus_tag="VIQ50_06345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEY9360035.1"
                     /translation="MAEGSTAAVEKAPGAFRTISEVAQELEVPQHVLRFWESRFREIR
                     PMKRGGGRRYYRPDDLDLLRGIRHLLYGEGYTIRGVQRLLREQGVRFVQNVWQPGAPQ
                     PARQTAEQDEGIEQASADDVDALPFSTLHDVGDERLQRSHAQPAAGVTSAAPAGLAAE
                     EVQKLRAAVQELTECRRLLEAALREKI"
     gene            complement(2739..3044)
                     /locus_tag="VIQ50_06350"
     CDS             complement(2739..3044)
                     /locus_tag="VIQ50_06350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HEY9360036.1"
                     /translation="MAMTGKTVTRADLCEAVYQKVGLSRTESATLVELVLKEITDCLE
                     RGETVKLSSFGSFVVRKKGQRIGRNPKTGKEVPISPRRVMVFKPSAILKQRINSDSK"
     gene            complement(3148..4125)
                     /locus_tag="VIQ50_06355"
     CDS             complement(3148..4125)
                     /locus_tag="VIQ50_06355"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007611077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HEY9360037.1"
                     /translation="MTILRSVVLGCGSYLPSRVLTNAELSRMVDTSDEWITQRTGIRE
                     RHIAAKGETTSDMAVAAARAALVAAGVDAQSIDLIVLATSTPDNTFPAAAVSVQAGLG
                     ITRGAAFDLQAVCSGFVFGLAAVDGLFKTGAFDRALVIGAETFSRILDWTDRGTCVLF
                     GDGAGAVVLEAQREPGTREDRGILSTHLRSDGRYKSKLYVDGGPSSTQTVGHLRMEGR
                     AVFKHAVAMITDVIEDAFKATGYGADDIDWFVPHQANKRIIDDSAKKLGIAPEKVVMT
                     VEKHGNTSAASIPLALTVAVADGRIKRGDLVMLEAMGGGFTWGSALLRW"
     gene            complement(4122..5183)
                     /gene="plsX"
                     /locus_tag="VIQ50_06360"
     CDS             complement(4122..5183)
                     /gene="plsX"
                     /locus_tag="VIQ50_06360"
                     /EC_number="2.3.1.274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043811 - phosphate:acyl-[acyl carrier
                     protein] acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HEY9360038.1"
                     /translation="MPQKVRIALDAMGGDHGAAVVVPGAELSLRRHPDIEFLLFGNRA
                     AVGPLLDSRPQLKAASQLVHTDVAVQMHDKPSQALRKGRRKSSMWLAVDAVKRGEADA
                     AVSAGNTGALMAMAKIDLRTMAGIDRPAIAALWPTLKGESVVLDLGASIGADAGHLVE
                     LAVMGSAMATVLFALDRPTVGLLNIGVEEVKGLEAVREAGQVLRAGQWPQFEYAGFVE
                     GDDIGKGTVDVVVTEGFSGNIALKAAEGTARQLGQYLKQEMNRTVVRKLGYLLARGAF
                     RALADKMDPRKSNGGVFLGLNGIVIKSHGGTDAEGFAYAVDLGYDMVRHDLLAKIGKS
                     LTRHRDKAVPARAVGGAAS"
     gene            complement(5232..5777)
                     /locus_tag="VIQ50_06365"
     CDS             complement(5232..5777)
                     /locus_tag="VIQ50_06365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HEY9360039.1"
                     /translation="MTKPERRSKGPWSVPLALSEVPEGGRHLDLVADRQTRTAVAEQA
                     GLDALPRLQASFDVAPHGRGGLRVVGHVSATVGQTCVITLEPIENEIDEAIDLVFAPG
                     DASPIIGAEVDLSAADASEALIGGGVDLGEIATEFLILGLDPYPRKPDAIFQSPTAGE
                     DSANPFAALAALKKRQRGRQR"
     gene            complement(5774..6337)
                     /locus_tag="VIQ50_06370"
     CDS             complement(5774..6337)
                     /locus_tag="VIQ50_06370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome C chaperone family protein"
                     /protein_id="HEY9360040.1"
                     /translation="MILKLFRRTPRDDSIARLYGTIVAQARAPAFYQLYGVPDTVNGR
                     LEMIMLHTVLFLRRLEGETRPIRRFGQGLFDRFCRDMDDNMREMGVGDLAVPRRMRRI
                     GEAFYGRQAAYRAALDASEDDRLAVVLQRNVFAGGTDRVGAERLAVYVREAERRLAAQ
                     DGFERAQFAFPDPEQVFLRARQPRVEQ"
     gene            6449..6889
                     /gene="bamE"
                     /locus_tag="VIQ50_06375"
     CDS             6449..6889
                     /gene="bamE"
                     /locus_tag="VIQ50_06375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HEY9360041.1"
                     /translation="MNKLTRLPRRAAAIAAAGAVLAVLLGGCFSETYQRGYIVPDGAL
                     EQIPVGSTQEQVLIVLGTPSTVATVSGEAFYYISQRAERTIGFMPQKVVDQRVIAVYF
                     DKNRRVERLANYGLKDGRVFDFVSRATPTGGKDVAYLNALFKIF"
     gene            complement(6928..9060)
                     /locus_tag="VIQ50_06380"
     CDS             complement(6928..9060)
                     /locus_tag="VIQ50_06380"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009678 - diphosphate hydrolysis-driven
                     proton transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-translocating pyrophosphatase"
                     /protein_id="HEY9360042.1"
                     /translation="MSALWPIVLCGVLAILYAVWATRSVLAADPGSARMQEIAAAVRE
                     GAQAYLKRQYTTIGMVGIVIFFILAYFLGWLVAVGFLIGAVLSGAAGFIGMNVSVRAN
                     VRTAQAAIHSLADGLELAFKSGAITGLLVAGLALLGVTLYFGFLVGTRHLAPDDRTVI
                     DALVALGFGASLISIFARLGGGIFTKGADVGGDLVGKVEAGIPEDDPRNPATIADNVG
                     DNVGDCAGMAADLFETYAVTTVATMVLAAIFFRTAGAGVLLKMMIYPLAIGGICIITS
                     IIGTFFVKLGPSQSIMGALYKGVIVTGVLSLAGVALVTHLLVGFGTVPGQSYSGTSLF
                     VCGVVGLIVTGLIIWITEYYTGTNYRPVQSIAKASVTGHGTNIIQGLAVSLEATALPA
                     IVIIAGILISYKLAGLFGIAVAVTTMLSLAGMVVALDAFGPVTDNAGGIAEMAGLPKE
                     VRKSTDALDAVGNTTKAVTKGYAIGSAGLGALVLFAAYNEDLKFFIANAATNPYFQGV
                     QLDFSLNNPYVVAGLLFGGLLPYLFGAMGMTAVGRAASAIVEEVRRQFREKPGIMQGT
                     DKPDYGRAVDLLTKAAIKEMVIPSLLPVLSPIVVYFLIYWIAGGGTAGRSAAFSAVGA
                     MLLGVIVTGLFVAISMTSGGGAWDNAKKFIEDGHYGGKGSEPHKAAVTGDTVGDPYKD
                     TAGPAINPMIKITNIVALLLLAVLAHWR"
     gene            complement(9205..10422)
                     /locus_tag="VIQ50_06385"
     CDS             complement(9205..10422)
                     /locus_tag="VIQ50_06385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360043.1"
                     /translation="MIDDLAQRAKPSRRGLFLQATIIAVIAGAALLSACGQSSDSQPP
                     AAQRQAADEQAQKEADEKAWAEAEKTGTVAAYTAYLQNFGSGAHVSEASQRIVALNEQ
                     ARKDADEKAWADAEKTGTAAAYMGYIQNFGGGAHVAQARQRVTELSRREADDKAWTDA
                     VRAGTATAFTSYTQNFSSGAHVAEARERLAALDEQARKDADEKAWADAQRTGTTAAFN
                     DYVQKFPSGTHGAEARQRIAALDEQARKEEDEKAWAEAQRSGTAAAFSNYVQKFGSGA
                     HVAEARQRAAALDARGRKELPGIDIQKTCKAAAGAMVSLMGGTTTEQDINACLDSEQK
                     ARDQIIKDGATYAAADKRQCMRTDVYLPSYVEWLTCLEMERDVRKMDREPRFGSGPWT
                     LPRVNPAINAGGR"
     gene            complement(10691..11929)
                     /locus_tag="VIQ50_06390"
     CDS             complement(10691..11929)
                     /locus_tag="VIQ50_06390"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HEY9360044.1"
                     /translation="MQDTTALVPPAAKDYVPADNPRFVKLHRRFPTVLYLRRHARRHV
                     PHFAFEYMDGGAGADDGIARNWRAFDGVEIVPRYGVTTALPPVGVELFGRRYSAPIGV
                     APMGGPSIVWPGADGYLAAAAQRARVPYVLGLVGGMTVEQAAEIAPDVLWFQLYRCSR
                     NDHAIGFDLVRRAQAAGVHVLVLTVDVPVRTTRPREVAVGITSPFRPDLPMLAAILSS
                     PGYLRSLWRHGQPRFGNLKPYAGDSADVNQVAAFVRREMGGAFTWDEVARYRERWKGP
                     LVVKGILHPADAETCVSLGVDGLIVSNHGGRQIEALPAAIDVIPAIARAVGGRSTVML
                     DSGVRSGLDVVRALVLGAEAAFAGKAFLWGLGALGAEGPPHVIDLMIDEMKAALGQIG
                     ALRPAQARAATARHPGALHF"
     gene            complement(12049..13062)
                     /gene="thiL"
                     /locus_tag="VIQ50_06395"
     CDS             complement(12049..13062)
                     /gene="thiL"
                     /locus_tag="VIQ50_06395"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009030 - thiamine-phosphate kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HEY9360045.1"
                     /translation="MAMSNDRAAQSGEERLIARYFAPLAKHPGAFALADDAAALAPPA
                     GCDLVLKADGIVAGVHFFADDPPDTVAKKALRANLSDLAAKGAAPLGFLLTLALPRDI
                     GDAWLAPFARGLGADAEAFGCPLLGGDTDGTTGPITISIAALGAVPQGKMLRRAGASA
                     GDRVVVTGTIGDAALGLLLRRDRATAERWGLAREASNSLQQRYLVPEPRLAIAEILRA
                     HASAAMDVSDGLVGDLAKLCRASAVNAEIEVGRVPLSTGARAALAKQPALIETILTGG
                     DDYEVLACVPTDKVEALRQQASAAGVPISEIGVVAAGEGGARFVGIDGEPLVFARTSF
                     SHF"
     gene            13152..14141
                     /locus_tag="VIQ50_06400"
     CDS             13152..14141
                     /locus_tag="VIQ50_06400"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEY9360046.1"
                     /translation="MEAFDLYSPAIDADPFPYYEVLRERHPCYWSESGNLWILSRYDD
                     IVQAARDWETFSSSQGNMIDELPGRAGATLGTTDPPRHDRLRALSQAAFTRKTSEQLV
                     APTLDIADRALERIRERREFEFINDFSSQITVGLLFRTMGLPERDHAEIRRKVILAVS
                     TDKSVKGRTVEHIAAFQELGAFLTAEVAARRAKPTDDLITHLAEAEIDGDRLSEREVV
                     LTTATFVMAGVESLSSFMSMFALNLHDYPDARRRIVTDPALIEQAIEESLRFNTSAQR
                     FKRTVRREVTLHGQILRVGDKVALAFGSGNRDWRKFPNPEKVSQSRAACTMSS"
BASE COUNT         2509 a         4698 c         4470 g         2484 t
ORIGIN      
        1 cgcggccgta ctcgtcagac ctttcccggc gccgggtcga tgctcgatcc caatcccgct
       61 cctgccaacg gtcctccgct gctcggtcgc ggcgcgagtt cgatgctcga tccggctccc
      121 gctcctgcca gcggttctcc cccactcggt cgcgatgcca gttcaccgct tgatcgacgt
      181 tctccgctcg accggaaaag cgcgcagctg ggacattttt atctgcggtc cagtcacgcc
      241 attcattgga cgcttgatcg gcattccgac tttgccacgg cattccgtca tccgaagcga
      301 cgtcccgacg ccaaaccgat gctcgattgc catcctgcct gcggcccgta gcgctgccgg
      361 ttgcaacttt gcgtttggag ccagacggct gatcggccgt ctcgcgttgg gccgcgcgct
      421 tgctgcgacg ggatgattgc gcgcgctcct cttctcggct gcttgcgcgg gtgccggcgc
      481 gctcagagtc tgctctgctg tccgcgccgt tgtccgcgcg ctcggagtcc gtcgattgga
      541 cgctcgcccg ctggctagac ggccgcgtcg cctgcgcagg agtggccgcg ctgccatctg
      601 cgttggtgag atccttcgcc gggcttggcg caccgccttc gagacagttg gcgtcgtcag
      661 gggagcaagg ctgctgcttg catgagcctg cgcaaccggc gactgggttg tttgcggggg
      721 gctgagcagc tgagccgcct tgagtgcgcc gggcgggtgc ggatccgttc tgctccgccg
      781 gagtcgtcgc aggtggcatc gtcgcagccg tactggatgc ggccggcttc gattcattcg
      841 cgctcgaatt ggcggacttt ccttcggtcg agatcgactc atccgatttg gtcgctatgt
      901 cagcgagcgg agcgaaagac cgatttgcgg ttgccatcgt tggcgagccg acatcggaag
      961 gcgtaacgat ttgcatgtgg gaaaacaacg tgccggctcc gaagcacgct agtgcgcctg
     1021 cagcgagcaa aatcgacttc atcgacgagc ggcgctccgc ctgcctcggc cgcggtacgc
     1081 ggggttttcc ccgagtgaac tgaggctgcg tgcgtgggcc tctttcggcc ctttcgccgc
     1141 gcgctgatgg atcggcaaaa tcgccgtgct gatgtttcag atcgagcggt tccaacagat
     1201 tcgaaggctc gagcagttga ggcggctcgt gcgtcgaagg cattctcggc tcctgatgcg
     1261 gcccccgacc gtcggatttg ggttgcaggc tcaattgcgt gtgtgcccac aagcgaagaa
     1321 ccactgcatc ccgcgatggt tcctcttgcc cggaccatta cgtccggcgt gatagttccg
     1381 gctggttacg agataccgcg tgcagtgccg atcgaggctc gatcacgaca atggcgagga
     1441 cagcggcgtt cgcgccaccc tcgccagtgc gcaggcgttc gacgcgcctt ctcaacgcgg
     1501 ctcattcatg ggaccgcgcg agactatgag gccaagctag ccggccaccc gcacgcgttc
     1561 ctgcgcctgc gcctcttcct tcgtcgtcgg ctttgccggg agttgcaaca cggtggcttc
     1621 ttgaccctcg cacaagaatg tcaggagcag cgtctgtccg tccggcaatt cgagcgcgtc
     1681 gtggtgcata tgcggctgat cgcggttgat ttgacggaaa attgccgtct gatgcttggt
     1741 aggcccgcaa gcaccataca ccgctatttc cgaatcgaag gcgagctccg tgccgggcag
     1801 cacgcagacc gcggtcccgg gatcgctcgg agcggcgaac ccgcgggtgc cggttccgaa
     1861 attcgtcgtt cgcagcttgg cgccaacgct cgcagggcgc gatttgacgt gcatcaaact
     1921 ataatcgcac atggaatgag ctcctctgtt ccacatctgc tgcgtctaac gcgcggaccc
     1981 cctcatggtt ctcttgttat gtcggccccc caacatactt gcgcagtccg tgttatgggg
     2041 cacggcgcgc atcgcgctcg gtccgcgagg tttgattttg cggacagctg gaaggcgtca
     2101 agggccggcg cgagactccg gcagaagcaa gcggcgagtg cggcgacatc accgcatccg
     2161 ataattcaga ttttttcccg cagcgccgcc tccagaagcc gccgacactc ggtcaactct
     2221 tggaccgccg cacgcaactt ttgcacttcc tcggcggcga gaccggctgg cgcggcactc
     2281 gttacgccgg ccgcaggctg agcgtgcgat ctctgcagcc gttcgtcgcc gacgtcgtga
     2341 agcgtcgaga agggcaatgc gtcgacatcg tccgccgatg cttgctcgat gccttcatcc
     2401 tgttcggccg tctgccgcgc gggttgcggc gcccccggct gccagacgtt ctgcacgaaa
     2461 cgcaccccct gctcgcgcaa gagacgctgg acgccgcgga tggtgtagcc ctcgccgtaa
     2521 agaagatggc ggatgccgcg caggaggtcg aggtcgtccg ggcgataata gcggcgtccg
     2581 ccgccgcgct tcatcggcct gatctcgcgg aagcggcttt cccagaatcg cagcacgtgc
     2641 tgcggaacct cgagttcctg cgccacttcg ctgatggttc ggaatgcgcc cggtgctttc
     2701 tccaccgccg ctgtgctccc ctcggccatg aacgacgctt atttggaatc ggagttgatg
     2761 cgctgcttga ggatcgccga cggcttgaac accatcacgc ggcgcggcga gatcggcact
     2821 tccttgccgg tcttgggatt gcgccctatt ctttggccct tcttgcgcac cacgaacgag
     2881 ccgaacgagg agagcttcac tgtctcgccg cgctcgagac aatcagtgat ttccttcaag
     2941 acgagttcga cgagcgtggc cgattcggtg cgcgacaatc ctaccttctg gtagaccgcc
     3001 tcgcacaagt ccgcgcgtgt gaccgtcttt cccgtcatcg ccagccccac cttcggcgat
     3061 caacatatct ctctgaatta aaagacgata ttcgcttgga ccggagcggt caacggggcg
     3121 tgccaggaag atttcgacaa acctccgtca ccaccgcagc agcgccgacc cccaggtgaa
     3181 gccgccgccc atggcttcca gcatgaccag atcgccgcgc ttgatgcgcc catccgcgac
     3241 cgccaccgtg agcgcgagcg ggattgatgc ggccgaggtg tttccgtgct tctccacggt
     3301 catgacgacc ttctccggcg caatgccgag cttcttcgca ctgtcgtcga tgatccgctt
     3361 attggcctga tgcggcacga accagtcgat gtcgtccgcg ccatagccgg tggccttgaa
     3421 ggcgtcttcg atcacgtcgg tgatcatggc cacggcatgc ttgaatactg ctcgcccttc
     3481 catgcgaaga tgtccgaccg tttgcgtcga agatgggccg ccgtccacat agagcttgga
     3541 cttgtagcgt ccgtccgaac gcaggtgcgt actgagaatg ccgcgatcct cgcgcgtgcc
     3601 tggctcgcgt tgcgcctcga ggacgacggc tcccgcgccg tcgccgaaca gcacgcaggt
     3661 accgcggtcg gtccaatcca ggatgcggga gaaggtctcc gcgccgatca ccagcgcacg
     3721 atcgaacgcg ccggtcttga acaggccgtc aacggcggca agaccgaaga cgaagccgga
     3781 acacacggcc tgcaaatcga aagctgcgcc tcgggtgatg cccagaccgg cttgcaccga
     3841 taccgcggcc gcggggaagg tgttgtcggg agtggaggtc gcgagcacga tcaagtcgat
     3901 cgattgcgca tcaacgccgg cggcgacgag cgccgcccgc gccgcggcaa ccgccatgtc
     3961 cgacgttgtc tctcccttgg cggcgatgtg gcgctcgcga ataccggtgc gctgcgtgat
     4021 ccattcgtcg gaggtgtcca ccatccgcga cagctcggca ttggtgagca cccggcttgg
     4081 caagtaactg ccgcagccga gcaccacgga ccgcaaaatg gtcacgaagc cgctcccccg
     4141 accgcacgcg ccggaaccgc cttatcgcgg tgccgcgtga ggctcttgcc gatcttggcc
     4201 agcaaatcgt ggcgtaccat gtcgtagccg agatcgaccg cgtatgcgaa gccctccgcg
     4261 tccgtaccgc cgtggctctt gatgacgatg ccgttgagac ccaggaaaac cccgccgttc
     4321 gacttgcgcg gatccatctt gtcggcaagc gcgcggaagg cgccgcgcgc taagagataa
     4381 ccgagcttcc tcaccaccgt gcggttcatc tcttgcttga ggtattggcc gagctggcgc
     4441 gcggtcccct cggcggcctt gagcgcgata ttgccggaaa acccctcggt caccactacg
     4501 tccaccgttc ccttgccgat atcgtcgccc tcgacgaagc cggcatattc gaactgcggc
     4561 cattggccgg cgcgcaacac ttggcccgcc tcgcggactg cctcaaggcc tttcacctcc
     4621 tcaaccccga tgttgaggag gcccacggtc ggccggtcga gagcgaacag caccgtggcc
     4681 atggcgctgc ccatcaccgc gagttcgaca agatgcccgg cgtcggcgcc gatcgaggcg
     4741 cccagatcga gcacgaccga ttcccccttg agcgtcggcc agagagcggc gattgccggt
     4801 cgatcgatgc cggccatggt tcgcagatcg atctttgcca tggccatcag cgcgccggta
     4861 ttgccggcag acacggcggc atcggcctca ccccgcttca cggcatcgac cgcaagccac
     4921 atcgaggatt tgcgacgccc cttgcgtagc gcctgactgg gcttgtcgtg catctgcacc
     4981 gccacgtcgg tatgcaccaa ttgcgaagcc gctttgagtt gcgggcggga atcgagcagc
     5041 ggtcccacgg cagcgcggtt gccgaacagc aagaattcga tatcgggatg gcggcggagc
     5101 gacagttccg cgcctggaac gaccaccgca gccccatggt cgccccccat ggcgtcgagc
     5161 gcaatacgaa ctttttgggg catggcgaaa caataccgtg tcacagggag ccacaacagg
     5221 gggccgggcg atcatcgctg ccggccacgc tggcgtttct tgagcgcggc gagcgcggcg
     5281 aatggattcg cagaatcctc gccagccgtc ggtgattgaa agatcgcgtc cggtttgcgc
     5341 ggataagggt ccaggccgag gatcaaaaac tccgttgcga tctcgccaag gtcgaccccg
     5401 ccaccaatca acgcctccga cgcgtccgcg gccgacagat ccacctctgc gccgatgatc
     5461 ggcgatgcgt cgccgggtgc gaaaaccaga tcgattgcct cgtcgatttc gttctcgatc
     5521 ggctcaagcg tgattacgca ggtctggccg acggtggccg acacgtggcc gaccacgcgc
     5581 aagccgccgc gcccgtgcgg cgcgacatcg aagctcgcct gaaggcgcgg caaggcatca
     5641 agcccagcct gctccgcgac cgcagttcgc gtctgccgat cggcgacgag atcgagatgg
     5701 cgcccacctt cgggcacttc gctgagcgcg agcggcacgc tccagggacc tttggaacgg
     5761 cgttcgggct tcgtcattgc tctacccgcg gctggcgcgc ccgcaaaaag acctgttccg
     5821 gatcggggaa ggcgaattgc gcgcgttcaa atccatcctg ggcggcgagc cggcgctcgg
     5881 cttcgcggac gtagacggcg agccgctcgg ctcccacgcg atcggtgccg ccggcaaata
     5941 cattgcgttg cagcaccacc gcaaggcggt cgtcctcgga cgcatccaat gctgcccgat
     6001 acgccgcttg ccggccataa aacgcctcgc cgatccggcg catcctccgc ggcaccgcaa
     6061 gatcgcccac acccatttcg cgcatgttgt cgtccatatc ccggcagaac cgatcgaaca
     6121 gaccttggcc gaaccggcga atcggccttg tttcaccctc cagacgccgc agaaacagca
     6181 cggtatgcag catgatcatc tccaatcggc cgttaaccgt gtccggcacg ccgtagagct
     6241 ggtaaaaggc gggggcgcgc gcctgtgcca cgatcgtgcc atagagacgc gcgatgctat
     6301 cgtcccgcgg ggtgcggcga aatagcttca atatcatcgc gttagttcgg cggccggaga
     6361 ccgggtccca ggactgacgg gaagctgata gcgccgatga ggtcaacccg ccagcgtccg
     6421 ccgcaatgat ataggggtca tgggccgcat gaacaaattg acccgcctgc cccgcagggc
     6481 tgccgccata gctgcggccg gggcggtact cgcggtgttg ctcggcggct gcttctcgga
     6541 gacctatcag cgcggctaca tcgtgcccga cggagcactc gagcagattc cggtcggatc
     6601 gacccaagaa caggttctga tcgtgctcgg cacgccatca acggtggcga cggtgagcgg
     6661 tgaggctttc tattacattt cccagcgcgc cgagcggacc attggcttca tgccgcagaa
     6721 agtcgtcgat cagcgggtca tagccgtcta tttcgacaag aatcgccggg tggagcgcct
     6781 cgccaattac ggcctgaagg acggcagggt gttcgacttc gtcagccgcg ccaccccgac
     6841 cggcggcaaa gacgtcgctt atctcaacgc gctgttcaaa atcttctagg cctcgcttcg
     6901 atatctcgcg attggcgaac gcgggcgtca acgccagtgc gcgagcacgg ccagcaacaa
     6961 cagcgccacg atgttggtga ttttgatcat cgggttgatc gcgggaccgg ccgtgtcctt
     7021 gtagggatcc ccgactgtat caccggtcac cgccgccttg tgcggctccg aacccttgcc
     7081 gccgtagtgg ccatcctcga tgaacttctt ggcgttgtcc cacgccccgc cgcctgaagt
     7141 catcgaaatc gcgacgaaca ggcctgtgac gatcacgccg agcaacattg caccgaccgc
     7201 ggaaaaagcc gccgagcggc cggctgtacc gccgccggcg atccagtaga tcaggaaata
     7261 tacaacgatc ggcgagagca ccggcaacag ggacggaatc accatctcct tgatcgcggc
     7321 cttggtgagg aggtcgacgg cgcggccgta atcgggcttg tcggtgcctt gcatgatgcc
     7381 cggcttctcg cgaaattgcc ggcgcacctc ctccacgatc gcggaggccg ctcgtcccac
     7441 cgcggtcatg cccatcgcgc cgaacagata tggcagcaag cccccaaaca aaagtccggc
     7501 aacgacgtat ggattgttca acgagaaatc gagctgaaca ccttggaaat acggattggt
     7561 cgccgcattg gcgatgaaga atttcaaatc ctcgttgtag gcagcgaaca acacgagcgc
     7621 gccgaggccg gccgaaccga tggcatagcc cttggtcacc gctttggtgg tattgccgac
     7681 cgcgtcgagg gcgtcggtcg atttgcgcac ctccttgggc agcccggcca tctccgcaat
     7741 gccgccggcg ttgtcggtga ccgggccgaa cgcgtcaagc gctacgacca tgccggcaag
     7801 tgacagcatg gtggtcacgg cgaccgcgat cccgaacagg ccggcgagct tgtagctgat
     7861 cagaatgccg gcgatgatca cgatggcggg aagcgcggtc gcctccagcg agacggcgag
     7921 accttgaatg atgttggtgc cgtggcccgt gaccgacgcc ttggcgatcg actgtaccgg
     7981 gcggtaattg gtgccagtgt agtattcggt gatccagata atcagtcccg tgacgatgag
     8041 gccgaccacg ccgcaaacga acagggacgt gcctgaatag gattgccccg gcaccgtgcc
     8101 gaagccgacc agaaggtgcg tgaccagcgc tacacctgcg agcgagagca cgccggtgac
     8161 gatcacgccc ttgtacagcg cacccatgat cgactggctc gggccgagct tgacgaagaa
     8221 cgtgccgatg atggaggtga tgatgcaaat gccgccgatg gcaagcggat atatcatcat
     8281 cttgagcagc acgccggcgc ccgccgtgcg gaagaagatt gccgcgagca ccatcgtagc
     8341 gaccgtggtc acggcgtagg tctcgaacag gtcggcagcc atgccggcgc aatcgccgac
     8401 gttgtcgccc acgttgtccg cgatcgtcgc cgggttacgc ggatcgtcct ccggaatccc
     8461 cgcttcgacc ttgccgacga ggtcgccccc cacgtccgcg cctttggtga agatgccgcc
     8521 gccgaggcgc gcgaaaatcg aaatcagcga tgcgccgaag ccgagcgcca cgagtgcgtc
     8581 gatcacggtg cgatcgtcgg gcgccagatg gcgggtgccg accaggaacc cgaagtagag
     8641 ggtgacgccg aggagcgcca gcccggccac caagagtccg gtgatcgcgc cggatttgaa
     8701 cgcgagttcg aggccatcgg cgagcgaatg gatcgccgcc tgggcggtgc gtacattggc
     8761 acgcaccgaa acgttcatgc cgatgaagcc cgccgccccc gaaagcaccg caccgatgag
     8821 gaagccgacc gctaccaacc atcccaggaa gtaagccaag atgaagaaga tcacgatccc
     8881 gaccatgccg atcgtggtgt attggcgctt gagataagct tgggcgcctt cgcgcacggc
     8941 tgccgcgatc tcctgcatcc gcgcactgcc cggatcggcg gcgagcacgg agcgggtcgc
     9001 ccagacggcg tagaggatgg cgagcacgcc gcaaaggacg atcggccaaa gagcgctcat
     9061 tattgaaacc cccgttgaga tgcggccgag cgaatggcgg ccttgcgtgc atcgcgcggc
     9121 gccaccgcgc ggcgtgaagc ggcgcggaca ttgccaaaaa cggctacgcc acgcaacgct
     9181 cgaaaatgcc ggtgtatcgg gttctcagcg gccaccggcg ttgattgccg ggttcaccct
     9241 cggcagcgtc cagggacccg acccgaaccg cggttcgcgg tccatctttc gcacgtcccg
     9301 ctccatctcg aggcaggtga gccattccac gtagctcggc aggtatacgt ccgttcgcat
     9361 gcactgcctc ttgtcggcgg cggcataggt cgccccgtcc ttgatgatct gatcgcgcgc
     9421 cttttgctcg gaatcgaggc acgcattgat gtcctgctcc gtcgtcgtgc cgcccatcag
     9481 gctgaccatt gcgccggcgg cagccttgca ggttttctga atatcgatgc cgggaagttc
     9541 cttgcgacct cgcgcgtcga gcgcggcggc gcgttggcgc gcctcggcga cgtgcgcgcc
     9601 ggagccaaac ttctgaacgt agttgctgaa agcggcggcg gtgccggagc gctgcgcctc
     9661 agcccaagcc ttctcgtcct cctccttgcg ggcttgctcg tcgagggcgg cgatgcgctg
     9721 gcgtgcctcg gcaccgtggg tgccggacgg aaacttttga acgtagtcgt taaacgccgc
     9781 agtggtgccg gtgcgttgcg cgtcagccca ggccttctcg tccgcgtctt tgcgggcctg
     9841 ctcgtcgagg gcggcaaggc gctcacgcgc ctccgcaacg tgcgcgccgg agctgaagtt
     9901 ttgtgtgtac gaggtgaacg ccgtggcggt gccggcgcga acggcatcgg tccaggcctt
     9961 gtcgtccgcc tccctgcggc tcagctcggt cacgcgctgg cgcgcctgcg ccacgtgcgc
    10021 accgccgccg aaattctgga tataccccat ataggccgcg gcagtgccgg tcttttcggc
    10081 gtcggcccag gctttctcgt ccgcgtcctt gcgcgcctgt tcgttgagcg cgacgatgcg
    10141 ctggctcgcc tcggagacgt gcgccccgga gccgaagttc tgcaggtatg cggtatacgc
    10201 cgccacggtc ccggtcttct cggcctcggc ccaggccttc tcgtctgcct ctttctgcgc
    10261 ctgctcatca gccgcctgcc gctgcgctgc cggcggctgc gaatccgagg actggccgca
    10321 agccgagaga agcgcagcgc cggcaatgac ggcaataatt gtcgcctgca gaaacaggcc
    10381 gcgccggctg ggtttggccc gttgagccaa atcatcgatc atggctggcc ttcttacacc
    10441 tcgcgtgcgg gtgccgcctc aacatacctc aaagttcgat atggtctaag cgttctctga
    10501 ggacaaggtc tgcttgcccc aacttaagtg gagtcctttg tcgcagccgg ggccgggcgc
    10561 agaatcaggc aatagctcgc ggccagcatt cacaatgcca cacctgccgc cttcgttcac
    10621 ggtgcaaggc atcggggcga tgtccccgct tgcactggtt gccggctcgg gatgatcggc
    10681 ggcacgcaga tcagaaatgc aacgcacccg gatgccgcgc ggtcgccgca cgcgcttgcg
    10741 ccggccgcaa cgcgccgatt tgaccaaggg cggctttcat ctcgtcgatc atgagatcta
    10801 tcacgtgcgg cgggccttct gcgcctagcg caccgaggcc ccacaggaat gccttgccgg
    10861 caaatgcggc ttcggctcca agcacgagcg cgcggaccac atcgagcccc gaacgcacgc
    10921 cgctgtcgag catcaccgtc gagcggccgc caacggcacg ggcaatggcg ggaatgacat
    10981 cgatcgctgc cggcagggcc tcgatttgcc gcccgccgtg gttggagacg atgaggccgt
    11041 cgacgccaag tgaaacgcaa gtttccgcat cggccggatg aagtatcccc ttcaccacca
    11101 gcggcccttt ccaccgctcg cgataacgcg cgacctcatc ccaggtaaag gcgccgccca
    11161 tctcgcggcg tacgaaggcg gcaacctggt tcacgtcggc gctgtcgccg gcgtaaggct
    11221 tgaggttgcc gaagcgcggc tgaccgtgtc tccatagcga acggagataa ccgggcgagc
    11281 tcagtatagc cgcgagcatg ggcaaatccg gccgaaacgg cgaagtaatg ccgaccgcca
    11341 cctcgcgcgg gcgcgtggtt cgcaccggca cgtcgaccgt gagcacgaga acatgcacgc
    11401 ccgccgcttg ggcgcggcgg acaagatcaa agccgatggc atgatcgttg cgcgaacaac
    11461 gatagagctg gaaccacagc acgtcgggcg cgatctcggc cgcctgctcg acggtcatgc
    11521 ccccaaccag accgagcaca taaggtacac gcgcgcgttg cgcggcggct gcgagatacc
    11581 cgtcggcgcc gggccatacg atcgagggac ctcccatggg cgcgacgccg atcggtgccg
    11641 agtagcgccg tccgaacagt tcgacgccga ccggcggcaa ggccgtagtc acgccataac
    11701 gcggcacgat ctccacccca tcgaacgcgc gccagttgcg ggcgatgcca tcgtcggcac
    11761 ccgcgccgcc atccatgtat tcgaaggcga agtgcggcac atgccgacgg gcatgccggc
    11821 gcagataaag gacggtcgga aagcgccgat gcagcttgac gaagcgcgga ttgtcggccg
    11881 gcacatagtc tttcgccgcc ggcgggacca aagctgtcgt gtcctgcatg ggtggctttg
    11941 ccctttcgcg cggcattata gcaactgagc gaggggcgcg agctttgcca tcgcgccggc
    12001 gaggcttctg cgcccaaaac ggcgaagatc ccgcttggcg gttgccgctc agaaatggct
    12061 gaacgacgtg cgcgcaaaga caagcggctc accgtctatg ccaacaaagc gcgctccccc
    12121 ctcccccgcc gccaccacgc caatctcgct gatcggcacg ccggccgccg atgcttgctg
    12181 acgcaacgct tcgaccttgt ctgttggcac gcacgccaga acctcatagt cgtcgccgcc
    12241 ggtgaggatc gtctcgatca gcgcaggctg cttggcgagg gctgcgcgcg cccccgtgga
    12301 gagcggaacg cgccccactt cgatttccgc attgacggcg gaggcgcggc agagcttggc
    12361 gagatctccg acgaggccgt ccgacacgtc catggccgcg gaagcgtgcg cgcggagaat
    12421 ttcggcgatc gcgaggcgcg gttccggcac gagatagcgc tgctgaaggc tgttgctcgc
    12481 ctcgcgcgcg aggccccaac gctcggcggt cgccctatcg cgacgcagca gcaagcccag
    12541 cgcggcgtca ccgatggtgc cggtgaccac cacccggtcg ccggcgctgg cgccggcgcg
    12601 acgcagcatc ttgccctgcg gcaccgcgcc gagagcggcg atcgaaatcg tgatcggtcc
    12661 ggtggtgccg tcggtatccc cgcccaacag cgggcagcca aaggcctccg cgtctgcacc
    12721 gagcccgcgc gcgaagggcg cgagccatgc gtcgccgatg tcgcggggca gcgccagcgt
    12781 gagcagaaag ccaagcggcg ctgcaccctt ggccgcgagg tcggaaaggt tggcgcgcag
    12841 cgccttcttg gccaccgtat cgggcgggtc gtcggcaaaa aaatgcaccc cggcaacgat
    12901 gccatcggcc ttgagcacga ggtcgcaacc tgccggcggc gcgagcgccg ccgcgtcatc
    12961 ggcaagggcg aacgcgccgg gatgcttggc gagcggcgcg aagtagcgcg cgatcagacg
    13021 ctcctcgccg gactgcgctg cgcggtcgtt gctcatcgcc atcggcggcc gaatagtcga
    13081 tcaagtgact ggtcgaagcc gccatgatag cttcgccgag aggcaaaata agcaagattc
    13141 cgggccgcgt gatggaagct ttcgacctct actccccggc aatcgatgcc gacccctttc
    13201 cgtactacga agtcctgcgt gagcgacatc cctgctactg gagcgaaagc gggaacctat
    13261 ggattctctc ccgctacgac gacatcgtgc aggcggcgcg tgattgggag accttctctt
    13321 cctcgcaagg caacatgatc gacgagctcc ccggccgcgc cggcgcgacg ttgggaacga
    13381 ccgatccacc ccggcacgac cggttgcggg cgctgagcca agccgcgttc acccgcaaga
    13441 ccagcgagca gctggtcgcg cccacgctcg atattgccga ccgggcgctc gagcgcatac
    13501 gcgaacgaag ggaattcgag ttcatcaacg atttctccag ccagatcacg gtcggcctgc
    13561 tgttccgcac catgggcctg cccgagcgcg atcacgccga aatcaggcgc aaggtcatcc
    13621 tggcggtttc taccgacaaa tcggtcaagg gacgcaccgt cgagcacatc gccgccttcc
    13681 aggagctcgg cgcgttcctc accgccgagg tggccgcgcg acgcgcgaaa ccgacggacg
    13741 atctcatcac gcatctcgcc gaagccgaga tcgacggcga ccggttgagc gagcgcgagg
    13801 tcgtgcttac gacggcgacc ttcgtcatgg caggagtaga atcgctctcg agcttcatga
    13861 gcatgttcgc gctcaatctg cacgattatc cggacgcgcg gcgccgcatc gtcaccgacc
    13921 ccgcgttgat cgagcaggca atcgaggagt cgctgcgttt caacacctcg gcgcagcgct
    13981 tcaagcgcac cgtccggcgc gaggtcacgt tgcacggcca aatcctgcgc gtgggcgaca
    14041 aagtggcctt ggccttcgga tccggaaatc gcgactggcg gaaatttccc aacccggaga
    14101 aggtctccca atcacgcgcc gcctgcacga tgtcgtcgta gcgggagaga atccataggt
    14161 t
//
LOCUS       DATCWM010000335         5044 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_310257, whole genome shotgun sequence.
ACCESSION   DATCWM010000335 DATCWM010000000
VERSION     DATCWM010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5044
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_310257"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..725)
                     /locus_tag="VIQ50_06405"
     CDS             complement(<1..725)
                     /locus_tag="VIQ50_06405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HEY9360047.1"
                     /translation="MAQTRKESDSLGVVEVPADKLWGAQTQRSLEYFSIGRDLIPPEM
                     ITAYAILKKAAAAANHANKRLDDRRYKLIVQACDEILAGKHHDMFPLHVWMTGSGTQF
                     NMNVNEVISNRCSQLAGTPLGSKTPVHPNDDVNMAQSSNDTFPSAMYIAAALNVKQCL
                     IPAVTALRDAIGAKAQAWDDIVKIGRTHMQDATPLTLGQEWSGYAGMLSDDLERIEAA
                     LQGVYQLAVGGTAVGTGINSAPG"
     gene            complement(837..1979)
                     /locus_tag="VIQ50_06410"
     CDS             complement(837..1979)
                     /locus_tag="VIQ50_06410"
                     /inference="COORDINATES: protein motif:HMM:NF012739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HEY9360048.1"
                     /translation="MSDVETKSERGRSADLRVVSSAQSAARAIHRTRIRIVPVLITLA
                     TTALAVGLGWWMWNAYMGTPWTRDGTVRVYTVKMAPEVFGRIVELPVTDNQFVAKGEL
                     LMVIDPTNYQIAVELADAAVKQAQASVQNAQAQIAVQQAQINASQAQVEQAKASLVFA
                     QQQAVRYGELAEKGYGPVQSAQQFSAEQREKQAAVESTEANLKLAQRQIDTLNAQLAS
                     AQANLAQVNAQRDQAKVNLDRTKIHSPVNGWVTNLLAQLGDYANVGQNKMTLVDADSF
                     WVDAYFTETALGSIREGDPAKVKLMGYSDIVRGHVDSIARGINVSNAQAGPQGLAQVN
                     PIFTWVRLAQRIPVRVHIDHVPKGIVLAAGQTATVEIEHRSRSPAR"
     gene            complement(1988..2191)
                     /locus_tag="VIQ50_06415"
     CDS             complement(1988..2191)
                     /locus_tag="VIQ50_06415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007800399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1656 domain-containing protein"
                     /protein_id="HEY9360049.1"
                     /translation="MTFHEIDLLGVYVAPISLLIIAAWFVTVGLRRIADRFGLLRHVW
                     HPSLFVFAVYIIVLSSIVLVIAR"
     gene            complement(2188..4245)
                     /locus_tag="VIQ50_06420"
     CDS             complement(2188..4245)
                     /locus_tag="VIQ50_06420"
                     /inference="COORDINATES: protein motif:HMM:NF016513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HEY9360050.1"
                     /translation="MSSVDGSGVGRATHPWGTALIDALRAAGPPLLFGLRLWASVCLA
                     LYVAFWLELDNAYWAGTSAGIVCQPHLGASLRKGWYRMIGTLVGAIAMVVLTACFPQD
                     RAAFMVGLALWGAICALVATVLRNFAAYSAALAGYTAAIIASDQLGATGGPNGDAFML
                     GITRVSEIWIGIVCAGIVLAGTDFGGALRRLATVFAGVSAEIVDGFGATLTQAPADTQ
                     QPVRRELIGKVVALDPIVDEAIGESSTLRYHSPVLQRAIEGLLAAIRAWRIVAVRLTR
                     LPDRVAREEADAVLRNIPQELRSAARLGGPAPWMADPESMRALCGAGARRLAAMPAGV
                     PSLRLLADQTARVMTGLMHALDALALLSGKADPPDARRRARLHVADWWPAFVNAGRAF
                     VMIGAVELFWIVTAWPNGAFAITFTAIVVTLLAPRADQAYAVALGFSVGVAIGTAGAA
                     IIAFAALPTVETFLGFCIMIGLFLVPAGAGVAQPWQTAAFIGMTYNFIPLLAPANQMT
                     YDTVQFYNSALSIGLGSVAGAMSFRLIPPLSPAFRTRRLLALTLRDLRRLATDPARWT
                     REDWEERMHTRIAVLPDAAEPLQRAQIMTALSVGIEIINLRRIAPQLGLDAELDAALA
                     SLAQGHSAAATARFAALDRRLAALAESGSQAFLALRTRAMVLLVSDALVQHGAYFDAG
                     EGA"
     gene            4524..4736
                     /locus_tag="VIQ50_06425"
     CDS             4524..4736
                     /locus_tag="VIQ50_06425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360051.1"
                     /translation="MKTVIAALALVTLISGPTFARTADRGAVATDVSARSAWDAGPQV
                     GGHNTNCYNPYIGDWKHGYPRDDDSC"
BASE COUNT          955 a         1590 c         1611 g          888 t
ORIGIN      
        1 aagcccggtg ccgagttgat gcccgttccc accgccgtgc cgcccaccgc caactggtac
       61 accccctgca gcgcggcctc gatccgttcg agatcgtccg acagcattcc ggcgtagccg
      121 gaccattcct gacccagggt cagcggggtg gcgtcctgca tgtgcgtgcg cccgatcttg
      181 acgatgtcat cccacgcttg cgccttggcg ccgatcgcgt cgcgcaaggc cgtgaccgcg
      241 ggaatgaggc attgctttac gttgagtgct gccgcgatat acatggccga gggaaacgta
      301 tcgttcgacg actgcgccat gttgacgtca tcgttgggat gaacgggcgt cttgctcccg
      361 agcggcgtgc cggcgagttg ggagcagcgg ttggagatca cttcgttgac gttcatgttg
      421 aactgggtgc cgctccccgt catccaaacg tgcaagggaa acatgtcgtg gtgcttcccg
      481 gcgaggatct cgtcgcacgc ctgaacgatc aatttatagc gccgatcgtc gagccgcttg
      541 ttcgcatggt tggcggcggc ggcggctttc ttcaaaatgg cgtaggcggt gatcatttcg
      601 ggcgggatca agtccctgcc gatgctgaaa tactcgagcg agcgctgggt ctgcgcgccc
      661 cacagcttgt ccgcgggcac ctcgaccacg ccgaggctgt cgctctcttt tcgcgtttga
      721 gccatgggat ctctcctcga ttcaatactt aagtcgcgga aaatccgggt caatcgcttc
      781 ggcgcagttg ggctctctca cggtctcgtt cgctcccgaa cggagcgcgc ttgcggttaa
      841 cgcgccggcg accgagatcg atgttcgatt tccacggtgg ctgtctggcc ggcggcgaga
      901 acgatgccct tgggtacatg gtcgatatgg acccgcacgg gaatgcgttg ggccaaacgc
      961 acccaggtga agatcgggtt gacctgcgcg agtccttgcg ggccggcctg cgcattggag
     1021 acgttgatgc cccgtgcgat gctgtcgacg tggccgcgga cgatgtcgct atagcccatc
     1081 agcttgacct tcgctggatc gccctcgcga atggagccta gcgcggtctc ggtgaagtag
     1141 gcatcgaccc aaaaggaatc ggcatcgacg agcgtcatct tgttctgccc gacattggcg
     1201 tagtcgccga gctgcgcaag caggttggtc acccagccat tgaccggcga gtggattttc
     1261 gtccgatcga gattgacctt ggcctggtcg cgctgggcgt tgacctgtgc caggttcgcc
     1321 tgggcgctgg cgagctgcgc attcaacgtg tcgatctgcc gttgcgcgag cttgagattt
     1381 gcctcggtgc tctcgaccgc cgcctgtttc tctcgctgct cggcgctgaa ttgctgggcg
     1441 ctttgaactg ggccgtaacc cttttccgcc aactccccgt agcgcaccgc ctgttgctgg
     1501 gcgaatacga gcgaggcctt cgcctgttcc acttgcgctt ggctcgcgtt tatttgcgcc
     1561 tgctgcacgg cgatctgcgc ctgggcgttt tgcacgctgg cttgcgcttg cttcacagcc
     1621 gcgtcggcaa gctcgacggc aatctggtag ttcgtcggat cgatcaccat cagcagctcg
     1681 cccttggcga cgaactgatt gtcggtgacc ggcaactcga cgatgcggcc gaagacctcc
     1741 ggcgccatct tgacggtata gacgcgcacc gtgccgtcgc gggtccaggg cgtccccatg
     1801 taggcgttcc acatccacca gccgagcccg accgccaggg cagtcgtggc gagggtaatc
     1861 aagaccggaa cgattcggat ccgcgtccga tggatcgcgc gagcagccga ctgggcggag
     1921 ctgacgacac gcagatccgc actcctgccg cgctccgatt tggtttcgac gtcggacatg
     1981 acgaatctca gcgggcgatg accagcacga tcgaagatag cacgattatg tagaccgcga
     2041 acacgaacag cgagggatgc cagacgtggc gcagcagccc gaaacgatcc gcgatccgcc
     2101 gcaatccgac cgtaacgaac cacgcggcga tgatcagcaa cgagatcggc gcgacgtaga
     2161 cgccgagcag gtcgatctca tggaacgtca agcgccttct cctgcatcga aatacgcgcc
     2221 gtgctggacg agcgcatcgg agacgagaag caccatcgcg cgcgtgcgca gcgcaaggaa
     2281 ggcctgcgag cccgactccg cgagcgcggc aagacggcgg tcgagcgcgg caaaccgtgc
     2341 ggttgcggca gcgctgtgtc cttgcgccaa ggaggcgagc gccgcgtcga gctccgcgtc
     2401 caagccaagt tgaggtgcaa tccgtcgcag attgatgatc tcgatgccga ccgacagcgc
     2461 ggtcatgatc tgcgcgcgct gcagcggctc ggccgcatcc ggcaacaccg cgatacgggt
     2521 gtgcatgcgc tcttcccaat cctctcgtgt ccagcgggca ggatccgtcg cgaggcggcg
     2581 cagatcgcgc aaagtcagtg cgagcaggcg gcgggtccgg aaggccggcg agagcggcgg
     2641 gatcagccga aatgacatcg ctccggcaac ggaacccagg ccaatcgaca gggcggagtt
     2701 atagaattgc acggtgtcgt aagtcatctg gttcgcgggt gcgagcagcg gaatgaaatt
     2761 ataagtcatg ccgatgaatg ccgccgtttg ccacggctgc gcgacccccg caccggctgg
     2821 gaccagaaag agcccgatca tgatgcagaa accgaggaag gtctctacgg tgggcaaagc
     2881 agcaaatgca atgatcgcgg cgccggcggt gccaatggcg acgcccaccg agaagcccaa
     2941 agcgaccgcg taggcctgat cagctcgcgg cgcaagcaag gtgaccacaa tggcggtaaa
     3001 cgtgatggca aaagcgccgt tcggccacgc ggtaacgatc cagaaaagct cgaccgcgcc
     3061 gatcatcacg aaggcgcgcc cggcgttgac gaaggcaggc caccaatccg ccacgtgaag
     3121 ccttgcgcgt cggcgggcgt cggggggatc agcctttccg ctcaacaacg caagcgcatc
     3181 gagcgcatgc atcaagccgg tcattaccct ggcggtctgg tcggcgagca gccgaagcga
     3241 cggcacgccg gcgggcattg cggccagccg ccgagccccc gcgccacaaa gcgctcgcat
     3301 gctttccggg tctgccatcc agggtgccgg cccgcccagt cgggcggccg accgcaactc
     3361 ttgcggaata ttgcgcagca cagcatcggc ctcttcccga gctacgcgat ccggcagtcg
     3421 cgtgagccgc accgcgacaa tgcgccaggc cctgatcgcg gccaatagcc cctcgatcgc
     3481 ccgctgcaat accggcgaat ggtagcgaag cgtcgaggat tctccgatcg cctcgtcgac
     3541 gatggggtcg agcgcaacga cctttccgat gagttcgcgg cgaaccggtt gttgcgtgtc
     3601 agccggcgcc tgcgtcaacg tcgcgccgaa cccatcgacg atctcggctg acacgcccgc
     3661 gaacactgtc gcaagccgcc gcagggcgcc gccgaagtcg gtcccggcga gcacgatccc
     3721 ggcgcagacg atcccgatcc agatctcgct gacgcgggtg atgccgagca tgaacgcgtc
     3781 gccgttcggt cccccggtcg cgccgagttg atcgctggcg atgatggcgg cggtatagcc
     3841 tgcgagcgct gccgagtagg ccgcaaaatt gcgcagcacc gtggcgacga gggcgcagat
     3901 tgcgccccac aacgccagac ccaccatgaa ggccgcgcgg tcctgcggga aacaggctgt
     3961 cagcacgacc attgcgattg cacccaccag ggtgccgatc atgcggtacc agcccttgcg
     4021 cagcgaggcg ccgaggtggg gctggcaaac gatccccgcc gaggtgccgg cccaataggc
     4081 gttgtcaagc tcgagccaga aggcgacgta aagggcaaga cagacggacg cccacaagcg
     4141 caggccgaac agcaagggtg gccccgcggc ccgcagcgcg tcgatcagcg ccgtgcccca
     4201 cgggtgagtt gcccgcccta ctccagagcc gtccaccgaa gacatttgca aggacctctg
     4261 tcgagaccgg tttcctcagt gttcaggcgc atcgattcgc gcggtgactg caaacaagag
     4321 atcaagaggg cgatttcagg cgacggccca aacgaccaaa gtatgaggcc cttgatcctt
     4381 ggcgtatgcg atcgatgcaa agatatagct cgcccgattc tggcactaag cctatctcgt
     4441 tcgtgactgc aaaccacgag ctgtcggctc gtgttctttg caggcgatcg ccgacgatcg
     4501 tcggacaagc acggagagat atcatgaaga ccgttatcgc tgctctcgca ctggtcacgc
     4561 tcatcagtgg gccgacattc gcccggactg cagaccgtgg cgccgttgcg accgacgtgt
     4621 ccgcgcgatc cgcgtgggac gctggaccac aggtcggtgg ccacaatacg aattgctaca
     4681 atccttatat cggggattgg aaacacggct atccccgcga cgacgacagc tgctgaaatc
     4741 gcgtcactgt gttcagatgg gtagagcgcc cgccggcgtt cgcgcagcgg tgggtggctt
     4801 tcctgcgtgc atattgatcc gtcgccagac ggcaagcccg cggcgcgaga atactcgggc
     4861 atccgccacc ggtgtcgtca tgacaaccaa ggtatatgca gaaaatccaa agatatagct
     4921 catcggccgg tggcgcctag cctatatcct caatgaggtc ggaagtaggg ctgtggcgtt
     4981 cctgctggtg ttggaaatca cggactgccg tccgtaagct cggagaagcg ctatgaaaac
     5041 gctc
//
LOCUS       DATCWM010000336         5182 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_29619, whole genome shotgun sequence.
ACCESSION   DATCWM010000336 DATCWM010000000
VERSION     DATCWM010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5182
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29619"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..151)
                     /locus_tag="VIQ50_06430"
     CDS             complement(<1..151)
                     /locus_tag="VIQ50_06430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9360052.1"
                     /translation="MARLSGRTAIVTGGAKGIGRHYSQALAAEGARVMVADIVDGREL
                     AAEIAA"
     gene            complement(156..731)
                     /locus_tag="VIQ50_06435"
     CDS             complement(156..731)
                     /locus_tag="VIQ50_06435"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEY9360053.1"
                     /translation="MSDRQLDVLVICGSLRKGSYNAALARTLPALAPGGMRLRDAPSF
                     ASFPLYNFDIQNETGFPHEVNAWADAIRSADGLIIVSPEYNWSIPGGLKNAIDWVSRM
                     KDQPFKDKPVALQSAAGGILGGSRMQHHLRQSLTSVDALLFGRPEVIVTFAAQKFDEK
                     TLELKDQTAIDMIKLQLSAFEQFIRRVSAKE"
     gene            complement(761..1330)
                     /locus_tag="VIQ50_06440"
     CDS             complement(761..1330)
                     /locus_tag="VIQ50_06440"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEY9360054.1"
                     /translation="MANLNIVSICGSLRKGSFNAMVQRALPSLAPDGMTIKPAPSFAD
                     FPHYNADIQNSTGFPAPVNTLADAIRAADGVIFCTPEYNFSIPGALKNAIDWVSRLQN
                     QPFAGKPVALQSASPGPLGGARVQYDLRKSMMFLDAFTLNKPEIFIGVCASKFDEKTG
                     ELKDEATRGFIKQQLAAFAAFIARVAPKS"
     gene            complement(1447..2322)
                     /locus_tag="VIQ50_06445"
     CDS             complement(1447..2322)
                     /locus_tag="VIQ50_06445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEY9360055.1"
                     /translation="MKIVGFEANGALRLGVVEGDQVIDLQAVDSTIPGDLGECLRRNN
                     GDLAPLKDAAKRAPAVARRALKGLSYGLPVAAPGKVICLGLNYLEHVKEGSQRDNIPK
                     FPTIFMRGPSSLVPHGQPILRPKASETLDYEAELIFIVGKRAKHLTPAGAYACIAGYA
                     CGNEGSVREFQRKTTQWDMGKNFDRTGGFGPWMVTADEVPPGGKGLKIESRLNGQVMQ
                     SDNTDNMMFPVAETIAYVTQGMTLEPGDIVFTGTPSGVGHARKPNPVWMKAGDTCEID
                     IEGVGLLINPIENEK"
     gene            complement(2397..3308)
                     /locus_tag="VIQ50_06450"
     CDS             complement(2397..3308)
                     /locus_tag="VIQ50_06450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360056.1"
                     /translation="MPICEADPWRLQYFEGAVCPPGVNIPTEDSDAWLWYPHHRWVYD
                     KVAIALSQGLDAGPHGVPPPRFPVFSKPIVNLKGMGIASRVLTSEREYEESLTPGHMW
                     MTLLDGRHVSSDVAVVDGEPRWWRHVTGEPGKEGTFDHWTVHAEGDGGIEDYCGTWIR
                     GHLKGYTGILNAESIGGRIIEVHLRMSDQWPDLYGAGWIEALVRLYHERRWEFADAAR
                     RDGYSVVLFGPHGRRYRHPPPALLAQVRHMPGVSSVQITFHEDKEPEQHAMPPGGFRL
                     AVVNAFDLDAGRAAREMLRTHFLAGAG"
     gene            complement(3337..4311)
                     /gene="egtD"
                     /locus_tag="VIQ50_06455"
     CDS             complement(3337..4311)
                     /gene="egtD"
                     /locus_tag="VIQ50_06455"
                     /EC_number="2.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030745 - dimethylhistidine
                     N-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0052699 - ergothioneine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-histidine N(alpha)-methyltransferase"
                     /protein_id="HEY9360057.1"
                     /translation="MAAPSEAAVRYEDADAASSFAGDVIAGLTAQPKRLPPKYFYDET
                     GAQLFEQITALPEYYLTRCELQILRERARDMAHFFPAPSALIEFGSGSSKKMRILLAA
                     ASTIAAYVPVDISSQMLVQEAQELRRDHPRLAVLPVEADFTKPFALPAAAAGMAHTGF
                     FPGSTIGNFEPHEAGAFLRHAGRMLGHRATLIIGVDLVKEMSILHAAYNDAAGLTAKF
                     NLNLLARINRELDGDFDLKAFDHRAFYNSERHRIEMHLVSKTRQQVRAAGRAFDFAAG
                     ETIHTENSYKYTLDHFTTLARGAGWTPVAVWTDSGKNFSVHALAFQDR"
     gene            complement(4338..>5182)
                     /gene="egtB"
                     /locus_tag="VIQ50_06460"
     CDS             complement(4338..>5182)
                     /gene="egtB"
                     /locus_tag="VIQ50_06460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0052699 - ergothioneine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ergothioneine biosynthesis protein EgtB"
                     /protein_id="HEY9360058.1"
                     /translation="LASIEEPQLAEVLRILEIGLHHEQQHQELILTDVLHAFAQNPLA
                     PAYAADWRLLRTPPSPDGLAGVPSGIQRIGFEGDGYSFDNEGPPHAVLLQPACIARGL
                     VTNAQWLDFMADGGYATPSLWLSDGWATVEAEGWNAPGYWRKLDGAWYAFTLGGLRPV
                     DPDTAVVHVSYYEADAFARWAGKHLPTEAEWEVAARANLLDDAFGIVWQWTRSAYLPY
                     PGYRAAGGALGEYNGKFMINQMVLRGSSHATPAGHARASYRNFFYPAARWQFSGLRLL
                     DYVA"
BASE COUNT          933 a         1661 c         1640 g          948 t
ORIGIN      
        1 cggcggcgat ctccgcggcg agttccctgc catcgacgat gtcggcgacc atcacgcgcg
       61 cgccttccgc cgcgagcgcc tgcgaataat gccggccgat gcccttcgcc ccgccagtga
      121 cgatcgcggt gcgcccggac agcctcgcca tggccttatt cctttgcgct cacgcggcgg
      181 atgaactgtt cgaaggccga aagctgaagc ttgatcatgt cgatcgccgt ctgatccttg
      241 agctccaggg tcttctcgtc aaacttctgc gcggcaaacg tgacgatcac ctcgggccgg
      301 ccgaacagaa gcgcatcgac cgaagtcaac gactggcgca ggtgatgctg catgcgcgag
      361 ccgccgagaa tgccgccggc ggccgattgc agcgccaccg gcttgtcctt gaacggctga
      421 tccttcatgc gggagaccca gtcgatggca ttcttcaacc cgccggggat cgaccagttg
      481 tactccggcg agacgatgat cagcccgtcg gcgctgcgga tggcgtccgc ccaggcgttg
      541 acctcgtgcg ggaagccggt ctcgttctgg atgtcaaaat tgtaaagcgg aaagctcgcg
      601 aacgagggcg cgtcgcgcag cctcattccc cccggcgcta gcgccggcag ggtgcgcgcg
      661 agcgcggcgt tgtaggagcc cttgcgcaac gagccgcaga tcacgagcac atcgagttgc
      721 cggtcgctca ccatatgcct ccccccgaaa gtctgcgcta tcagctcttg ggagcgactc
      781 gcgcgatgaa ggcagcaaac gccgccaatt gctgtttgat gaagccacgc gtggcctcgt
      841 ctttgagctc gccggtcttc tcgtcgaact tcgacgcgca aacgccgatg aagatctccg
      901 gcttgttcag cgtgaaggca tcgagaaaca tcatcgactt gcgcaaatcg tactgtacgc
      961 gcgcgccgcc gagcggcccg ggcgaggccg attgcagcgc taccggtttg ccggcgaagg
     1021 gctggttctg cagtcgcgac acccagtcga tcgcgttctt gagcgcgccc gggatactga
     1081 aattgtattc gggcgtgcaa aagatcacgc cgtcggcggc gcggatcgca tcggcgagcg
     1141 tgttgaccgg cgcgggaaag ccggtcgagt tctggatgtc ggcgttgtag tgcggaaaat
     1201 cggcaaagga aggcgccggt ttgatcgtca tgccgtccgg cgcgagcgag ggcagcgccc
     1261 gctgcaccat ggcattgaag gaacctttgc gcagcgagcc gcagatcgag acgatgttca
     1321 agttagccat gagagcctcc aaatttttcg gggacataat ccgcggtgtc gcagtaggtc
     1381 tgtcccgacc tcacgcgcag aagttcctcg acacgaggtt cctcggcatg agcgcggagc
     1441 accgcgttat ttctcgttct cgatgggatt gatgagcagg ccgacgccct cgatgtcgat
     1501 ctcgcaggta tcgcctgctt tcatccacac cgggttcggc ttgcgtgcgt ggccgacgcc
     1561 cgacggcgtg cccgtgaaca cgatatcacc cggctcaagc gtcatgccct gcgtgacata
     1621 ggcgatggtc tcggcgacgg gaaacatcat gttatcggtg ttgtccgact gcatgacctg
     1681 tccgttgagc cggctctcga tcttcagtcc cttgccgccg ggcggcactt cgtcggccgt
     1741 gaccatccag ggcccgaaac caccggtgcg gtcgaaattc ttgcccatgt cccattgcgt
     1801 ggtcttgcgt tgaaattcgc gcaccgagcc ttcgttgccg caggcatatc cggcgatgca
     1861 cgcatatgcg cccgcaggcg tgaggtgctt ggcccgtttg ccgacgatga agatgagctc
     1921 ggcttcgtag tcgagcgtct ccgacgcctt cgggcgcagg atcggttgtc cgtgcggaac
     1981 gagtgagctc ggcccgcgca tgaagatcgt cggaaatttc ggaatattgt cgcgctgcga
     2041 gccttccttg acgtgttcga gatagttgag accgaggcag atcaccttgc ccggtgccgc
     2101 caccggcaaa ccgtagctca gccctttgag cgcgcggcgc gcgaccgcgg gagcgcgctt
     2161 cgccgcgtcc ttgagcgggg ccagatcacc attgttgcgg cgcaggcatt cgccgagatc
     2221 gccgggaatg gtgctgtcca ccgcctgcag gtcgatcact tggtcgccct cgaccacgcc
     2281 gaggcgcaat gcgccattgg cttcgaaacc gacgattttc atgcttactc cctggcttga
     2341 tctcgccgtc ttgtagcaac aagcgctagc gcgggcaaag gcgccgctct acacgatcac
     2401 cccgcgccgg cgaggaaatg ggtccgcagc atctcgcgcg cggcgcggcc ggcatccaga
     2461 tcgaaggcgt tcacgacggc gagacgaaag ccgccaggcg gcatggcgtg ctgttccggt
     2521 tccttatcct cgtgaaacgt gatttgcacg ctcgacacgc ccggcatgtg ccgcacctgg
     2581 gcaagaagcg ccggcggcgg atggcgatag cgccgcccat gcggaccgaa gagcaccacg
     2641 ctgtatccgt cgcgacgcgc ggcgtcggcg aactcccatc gccgctcgtg atagagccgc
     2701 acgagtgcct cgatccaacc cgcgccatag aggtcgggcc attgatcgct catgcgcagg
     2761 tgcacttcga tgatgcgtcc gccgatggac tcggcattga ggatgccggt gtagcccttg
     2821 agatgcccgc gaatccacgt gccgcaatag tcctcgatgc cgccatcgcc ctcggcgtgc
     2881 accgtccaat ggtcgaaggt cccttccttt cccggctcgc cggtcacgtg ccgccaccag
     2941 cgcggctcgc catcgacgac agcgacatcc gagctaacat ggcgcccgtc caacagcgtc
     3001 atccacatgt gccccggcgt gaggctttct tcgtattccc tctccgaggt gaggacgcgg
     3061 ctcgcgattc ccatgccttt gaggttgacg atcggcttgg aaaacacggg aaagcgcggc
     3121 ggcggcaccc catgcggtcc ggcatcgaga ccctggctca acgcgatcgc gactttgtca
     3181 tagacccagc gatggtgcgg ataccaaagc caagcgtcgc tgtcttcggt cgggatgttt
     3241 acacccggcg gacagaccgc accctcgaaa tattgcaggc gccagggatc ggcttcgcag
     3301 atcggcatgc gctcaattcg attgcaacgt cgcggatcat cggtcctgga aggccagagc
     3361 atggaccgaa aaattcttac ccgagtcggt ccaaacagcg accggggtcc agcccgcacc
     3421 gcgcgccaat gtcgtgaagt gatcgagcgt gtatttatag ctgttctcgg tgtggatggt
     3481 ctctccggcg gcgaaatcga acgcccgtcc ggcggctcgg acctgctggc gcgtcttgct
     3541 gacgaggtgc atctcgatgc ggtggcgctc ggaattatag aaggcgcgat gatcgaaggc
     3601 cttgagatcg aagtctccgt cgagctcgcg attgatgcgc gcgagcaggt tgagattgaa
     3661 cttcgcggtg aggccggccg cgtcattgta tgcggcgtga aggatactca tctccttcac
     3721 cagatcgacc ccgatgatca aggtagcgcg atgtcccagc attcgcccgg cgtggcgcag
     3781 gaacgcgccg gcttcgtgcg gctcgaaatt gccgatggtc gatccgggaa agaacccggt
     3841 atgcgccatg cctgccgccg cagccggcaa ggcaaagggc ttggtgaaat cggcttcaac
     3901 cggaagcacc gcgaggcggg gatggtcgcg gcgaagctct tgcgcctcct ggacaagcat
     3961 ttgcgaggat atgtcgaccg gcacgtaggc ggcgatggtc gacgccgcgg ccagtaggat
     4021 ccgcattttc ttgctcgagc cgctgccgaa ttcgatcagc gccgaaggcg cgggaaaaaa
     4081 gtgcgccatg tctcgcgccc gttcgcgcag gatctggagc tcgcaacgcg tcaaataata
     4141 ttccggcaat gccgtgatct gctcgaacaa ttgcgcgccg gtctcgtcgt agaagtattt
     4201 cggggggagc cgcttgggct gggcggtcag cccggcgatg acatcacccg cgaacgacga
     4261 agccgcgtcg gcgtcctcgt agcgaacagc ggcctcactg ggcgcagcca tgactcactc
     4321 cggttcaccg cgcacgttca tgcgacatag tccagaagtc tcagtccgct gaactgccag
     4381 cgcgccgccg gatagaagaa attccggtag ctcgcacgcg catggccggc gggcgtggcg
     4441 tgcgagcttc cccgcaagac catctggttg atcatgaact tgccgttgta ttcgccgagc
     4501 gcgccccctg ccgcgcggta accgggataa ggcaggtaag cgctgcgcgt ccactgccac
     4561 acgatcccga aggcgtcatc gagtaggttg gcgcgcgccg cgacctccca ttccgcttcg
     4621 gtcggcaagt gcttgccggc ccagcgcgcg aaggcgtccg cctcgtaata gctcacgtgc
     4681 acaaccgccg tgtccggatc gaccggccgc agcccgccga gcgtgaacgc gtaccacgcg
     4741 ccgtcgagct tgcgccaata accgggcgcg ttccagcctt ccgcctcgac cgtcgcccag
     4801 ccgtccgaga gccataagga cggcgtcgca tagccgccgt cggccatgaa atccaaccat
     4861 tgcgcattgg tcacgagccc gcgggcaatg caggccggct gcagcaggac cgcgtgcggc
     4921 ggcccctcgt tatcgaaact atacccatca ccctcgaagc cgatgcgctg gatgccggac
     4981 ggcactccgg ccaatccgtc cggcgaaggc ggcgtgcgca gcaagcgcca atcagcggcg
     5041 tatgcaggcg cgagcggatt ctgcgcgaag gcatgtagga catcggtgag gatgagctcc
     5101 tggtgctgct gctcgtgatg caggccgatc tccaggatgc gcagcacctc ggcgagttgc
     5161 ggctcctcga tactcgccag ca
//
LOCUS       DATCWM010000337         3000 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_364269, whole genome shotgun sequence.
ACCESSION   DATCWM010000337 DATCWM010000000
VERSION     DATCWM010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3000
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_364269"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1062
                     /locus_tag="VIQ50_06465"
     CDS             <1..1062
                     /locus_tag="VIQ50_06465"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEY9360059.1"
                     /translation="APDVALARAGEVLAAATRPIAVIGATAMRLADPSLLGSVIEHHN
                     LPFATTTMAKGMLDDDHPLALGCIERACRQLQRKFLRSADLVVGLGYDTVEVEYEAWI
                     GDRPLLQIDIEPVDIAPSVKLVHQATGDLDSSLRRLLALPAAANQWNAAMLAKHRQSF
                     QAALRPAAKSFTAHAAIDAVRRALPRDGVLAFDVGAHTHQIASQWSAHAPKTFQITNG
                     WSSMGFALPGAIAAKLARPEAPVVCLLGDGCFQMTCGEVATAKRLGITLPIVVLDDRW
                     LALIKVKQIRRQFPLYGTELQAEDYREPPAHYFGVPARAAYSADALAEAVSAALRESG
                     PTVIEAVVDSEHYLDTVYD"
     gene            complement(1076..1840)
                     /locus_tag="VIQ50_06470"
     CDS             complement(1076..1840)
                     /locus_tag="VIQ50_06470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY9360060.1"
                     /translation="MRGLNERTVLVTGGANGIGAATARRLAEEGCTVGILDMDVEAAE
                     DVADEITARGRRASFHAADISDYDAVSRAVERFEAASGPVSFLVNNAGWDRAQNFLDT
                     APDFWRKVVAVNLFGPLNVSHVVLRGMAARGFGRVVNIASDAGRVGSSGEAVYSACKG
                     GIIALTKTLARELVGKGVILNTICPGPTDTAILRSFLEGAEGARIAEGLKRAIPMRRF
                     GAPEDYPGLVAFLLSDDAAYMTGQTISVSGGLTMHG"
     gene            complement(1849..2331)
                     /locus_tag="VIQ50_06475"
     CDS             complement(1849..2331)
                     /locus_tag="VIQ50_06475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008190164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
                     /protein_id="HEY9360061.1"
                     /translation="MQTLGLGFTWEELSPGQRFRTLNRTITETDLVLFTGVTGMLETI
                     FTDRTFAAEKGAIQGQFVPAALTYSLIEGLLCQSMIQGTGLAMLELNQQILAPVRVGD
                     TVHGEIEITSVRPTSKGNRGIVVSRIDVKNQQGEVVMTYEATRMLAGRSADQGTSERA
                     "
     gene            complement(2360..>3000)
                     /locus_tag="VIQ50_06480"
     CDS             complement(2360..>3000)
                     /locus_tag="VIQ50_06480"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEY9360062.1"
                     /translation="ESAALGIAPRERRQRMIENIRILRHLWAKDDEPFLGQFTSFSNV
                     TLEPKPIQSPCPIWLATNAERLASGQADSGGSELALRRVGEIADGWMTHFVGPDGFKR
                     SWDFILRVGRENGRDVSRFDNVLYHHVNVNADKEEALADSKKFLDLYYAADYTKARIE
                     SWLTYGSPRECVEHIKRFKASGCRRITFRISTMGDAMEQFRRLVEDVLPYVD"
BASE COUNT          506 a         1019 c          954 g          521 t
ORIGIN      
        1 gcgcctgacg tcgcgctcgc gcgcgcgggt gaggtgctcg ccgcggcgac gcggccgatc
       61 gcggtcatcg gcgcgacggc gatgcgcctt gcggacccct cgctgctagg cagcgtgatc
      121 gagcatcaca atttgccgtt cgccaccacg accatggcca aggggatgct cgacgacgac
      181 catccgctcg cgctcggctg catcgagcgc gcctgcaggc aactccagcg taagttcctg
      241 cgctccgccg atctcgtcgt cggtctcggc tacgacaccg tcgaggtgga atacgaagcg
      301 tggatcggcg accgcccgct gctgcagatc gacatcgagc cggtggacat cgccccctcg
      361 gtcaagctgg tgcatcaggc gaccggcgat ctcgactcct cgctgaggcg gctgttggcg
      421 ctgccggcag ctgccaacca gtggaacgcc gcgatgctcg cgaagcaccg ccaaagcttc
      481 caagccgcat tgcgtcccgc ggcgaagtcc ttcaccgccc atgccgcgat cgatgcggtg
      541 cgccgcgcat tgcctcgcga cggcgtactg gccttcgacg tcggcgcaca cacgcaccag
      601 atcgccagcc aatggagcgc ccacgcgccc aagaccttcc agatcaccaa cggctggtca
      661 tcgatgggct tcgcgcttcc cggcgcgatc gcggccaagc tggcgcgtcc cgaggcgccg
      721 gtggtctgtc tcctgggcga cggctgtttt cagatgacat gcggcgaggt ggcgaccgcg
      781 aagcgcctcg gcatcacgct gccgatcgtg gtcctcgacg accgctggct cgcgctcatc
      841 aaggtgaagc agatccggcg gcaatttccg ctctacggca ccgagctgca ggcggaggat
      901 tatcgcgagc cgccggcgca ttatttcggc gtgcccgcac gcgcggcgta cagcgccgat
      961 gcgctcgccg aggcagtgag cgcggcgttg cgggaaagcg gaccgacggt catcgaagcc
     1021 gtggtcgatt ccgagcacta cctcgatacg gtttacgatt gagcgctgcc ctgcgttagc
     1081 cgtgcatggt gagcccgccc gagacgctga tggtctggcc cgtcatgtag gcggcgtcgt
     1141 ccgacagcag gaacgcgacc agccccggat aatcctccgg cgcgccgaac cgccgcatcg
     1201 ggatggcgcg cttgagccct tcggcgatgc gcgcgccctc ggcgccttcc aggaaactgc
     1261 gcagaatggc ggtatcggtc gggcctgggc agatcgtatt gaggatcacc cccttgccga
     1321 cgagctcgcg cgcaagcgtc ttggtcaagg cgatgatgcc gcccttgcag gcggaataga
     1381 ccgcctcacc cgaggagccg acgcgtccgg cgtccgaggc gatattgacg acgcgtccga
     1441 aaccgcgcgc tgccatgccg cgcaggacga cgtggctcac gttgagcggg ccgaacagat
     1501 tgacggcgac aaccttgcgc cagaaatcgg gcgcggtgtc gaggaaattt tgggcgcgat
     1561 cccagccggc attgttgacg agaaacgaca ccggccctga cgccgcctcg aagcgctcga
     1621 ccgcgcgtga caccgcgtcg taatcgctga tgtccgccgc gtggaagctt gcgcggcgac
     1681 cgcgcgccgt gatctcgtcg gcgacgtcct ctgccgcctc aacatccatg tccaaaatgc
     1741 cgaccgtgca gccctcctcg gccaagcgcc gcgccgtcgc ggcgccgatg ccgttggcgc
     1801 cgccggtcac caaaacggtg cgttcgttca gcccgcgcat attcgcactc acgccctctc
     1861 tgaggtgcct tgatcggccg agcggcctgc cagcatgcgg gtggcttcgt aggtcatgac
     1921 gacctcgccc tgttggttct tcacgtcaat tctcgacacg acgatgccgc gattgccctt
     1981 ggaggtgggg cgcacggacg tgatctcgat ttcaccatgc accgtatcgc cgacgcggac
     2041 cggcgccagg atttgctggt tgagctcgag catggcgaga cccgtccctt ggatcatgct
     2101 ttggcagagc agcccctcga tcaagctgta ggtcaaagcg gccggcacga actgcccctg
     2161 aatcgcgccc ttctcggcag cgaaggtgcg gtcggtgaaa atcgtctcca gcattcccgt
     2221 cacgccggtg aaaagcacga gatcggtttc ggtgatggtg cggttgagcg tgcgaaaccg
     2281 ctgtccgggc gagagttcct cccaggtgaa gccgagcccg agcgtctgca tgcagatctc
     2341 cccaaatcac tttccgcggt cagtcgacat acggcagcac gtcttcgacc aagcgccgga
     2401 attgctccat agcatcgccc atggtggaaa tgcgaaacgt aatgcgtcgg cagcccgagg
     2461 ccttgaaccg cttgatgtgc tcgacgcatt cccgcggcga gccgtaagtc agccaggatt
     2521 cgatccgcgc tttggtgtag tccgccgcat agtacagatc gaggaatttc ttcgaatcgg
     2581 cgagcgcctc ctccttgtcc gcgttcacgt tgacatggtg ataaagcacg ttatcgaagc
     2641 gcgacacgtc gcggccgttc tcgcggccga cgcgcaggat gaaatcccac gagcgcttga
     2701 atccgtccgg gccgacgaaa tgcgtcatcc agccgtcggc gatttcgccc acgcgcctca
     2761 gcgcaagctc cgacccgccg gaatcggcct gcccgcttgc cagccgctcc gcgttcgtcg
     2821 ccaaccagat cggacacggc gattggatcg gcttcggctc gagcgtcacg ttggagaagc
     2881 tggtgaattg ccccagaaac ggctcgtcgt ccttggccca cagatgccgc aggatgcgga
     2941 tgttctcgat catccgctgg cgccgctctc gcggcgcgat gccgagcgct gcgctctccg
//
LOCUS       DATCWM010000338         2739 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_218584, whole genome shotgun sequence.
ACCESSION   DATCWM010000338 DATCWM010000000
VERSION     DATCWM010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2739
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_218584"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..457
                     /locus_tag="VIQ50_06485"
     CDS             <1..457
                     /locus_tag="VIQ50_06485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007611034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEY9360063.1"
                     /translation="TAAGCQLVATCDLAVASTAAKFCTPGVHIGLFCSTPMVALSRNV
                     ARKHAMEMLLTGDMISAEDAHRIGLVNRVVEPGTAREEALKLARKIAANSAAAVKFGK
                     EAFYQQLEMGIAEAYAHATEVMVKNMMARDAEEGIAAFVEKRQPTWEEG"
     gene            545..1129
                     /locus_tag="VIQ50_06490"
     CDS             545..1129
                     /locus_tag="VIQ50_06490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HEY9360064.1"
                     /translation="MDHNSYDDRYIRGILNTVKTIAMVGVSANTSRPSYFAFKYLLER
                     GYGMIPINPGLEGQDLLGRKVYAKLADVPEPIDMVDMFRASRYASAIVEEALALNPRP
                     QVIWMQLGIRNDEAARLAEDNDLKVVMNRCPKIEYGRLSSEIAWMGVNTRTLTAKKAR
                     LFGRGIQRMALDRVTLAGAADSATRAHKPDDNSR"
     gene            1262..2545
                     /locus_tag="VIQ50_06495"
     CDS             1262..2545
                     /locus_tag="VIQ50_06495"
                     /EC_number="2.5.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008137953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase"
                     /protein_id="HEY9360065.1"
                     /translation="MTDRIPGFATLAIHAGAQPDPTTGARATPIYQTTSFVFEDVDHA
                     ASLFGLQTFGNIYTRIGNPTNAVLEERVAALEGGTAGLVVASGHAAQVVALHCLMTPG
                     DELVAAKKLYGGSINQFNHAFKNFGWNVVWAEPDDIATFERAVSPKTKAIFIESIANP
                     GGVITDIEAIGKIAKNAGVPLIVDNTLATPYLCRPIEYGADIVVHSLTKFLGGHGNSI
                     GGVIVDGGTFNWSREKRYPMLSEPRPEYHGIVLHETFGNFAFAIACRVLALRDLGPAL
                     SPFNAFLILTGIETLPLRMQRHCDNALAVAQWLADQREVAWVSYPGLAGDRYHNLAKR
                     YVPKGAGSCFTFGLKGGYDAGVRLVSNVKLFSHLANIGDTRSLIIHPASTTHRQLTDA
                     QKIQAGAGPDVVRLSIGLEDKADIIGDLEQGLAAA"
BASE COUNT          512 a          923 c          841 g          463 t
ORIGIN      
        1 cacggcggcc ggatgccaac tcgtcgccac ctgcgacctc gcggtggcct ccacggccgc
       61 gaagttctgc acgccgggcg tgcatatcgg cttgttttgc tcgaccccca tggttgcgct
      121 ctcgcgcaac gtggcgcgca agcacgccat ggagatgctg ctcaccgggg acatgatctc
      181 ggcggaggac gcccatcgca tcgggctcgt caaccgggtg gtcgagccgg gcaccgcgcg
      241 cgaggaggcg ctcaagctcg cccgcaagat tgccgccaac tcggccgcgg cggtgaaatt
      301 cggcaaggaa gcgttctatc agcagcttga aatgggaatc gcggaggcct acgcgcacgc
      361 gaccgaagtc atggtcaaaa acatgatggc acgtgacgcc gaagaaggca ttgccgcttt
      421 cgtggagaag cgccagccga cctgggagga gggctgacgc gggctaacga acgaaagcgc
      481 cgcatgcgca ccctttccag cccgcgcggt cgtccatatc ttcggaaccg aaggcggcgc
      541 aggcatggac cacaacagct acgacgaccg ttacattcgc ggcatcctca acaccgtgaa
      601 gacgatcgcg atggtggggg tctcggccaa taccagccgg ccgagctact tcgcgttcaa
      661 atatctgctc gagcgcggct atggcatgat cccgatcaac cccggcctgg aagggcaaga
      721 cttgctgggc cgtaaggtct acgccaagct cgccgacgtt ccagaaccca tcgacatggt
      781 cgacatgttt cgagcgtcgc gctatgcgtc cgccatcgtc gaggaagcgc tcgcgctcaa
      841 tccacgcccg caggtgatct ggatgcagct cggtatccgc aacgacgagg cggcgaggct
      901 cgccgaggac aatgatctca aagtggtgat gaaccgctgc ccgaagatcg agtacggccg
      961 cctctcgtcg gagatcgcct ggatgggggt caacacccgt accctgaccg ccaagaaggc
     1021 tcgcctgttc ggacgcggca tccagcgcat ggcgctcgac cgagtcacgc tcgccggcgc
     1081 cgccgattcg gcgacgcgcg cgcacaagcc ggacgacaac agccgttagc gtccgagctt
     1141 cctgcggctt atccccgcgc ggatggatgc agccggcgca agtcttgacg cccgaaggcg
     1201 cttcgataaa ccagcgtcag gatccgcgga ccgcccggtc ccggcgagac gaggaccggc
     1261 catgaccgac cgcatcccag gctttgccac gctcgcgatc catgccggcg cgcagcccga
     1321 cccgaccacc ggcgcgcgcg ccacgccgat ctaccaaacg acgtcgttcg tgttcgaaga
     1381 cgtcgatcac gcggcctcat tgttcggctt gcagaccttc ggcaacattt acacgcgcat
     1441 cggcaatccg accaacgcgg tgttggagga gcgcgtcgcc gcgctcgaag gcggcaccgc
     1501 cggattggtg gtcgcctccg gccatgccgc ccaagtcgtc gccctgcatt gcctgatgac
     1561 tccgggcgac gaactggtcg ccgcaaagaa gctttatggc ggctcgatca accagttcaa
     1621 tcacgcgttc aagaatttcg gttggaacgt cgtgtgggcc gagcccgacg acatcgccac
     1681 gttcgaacgc gcggtgtcgc cgaagaccaa ggcgattttt atcgagtcga tcgccaatcc
     1741 cggcggcgtc atcaccgaca tcgaggcgat cggcaagatc gccaagaatg cgggagttcc
     1801 gttaatcgtc gacaacaccc tggccacccc atatctgtgc cggccgatcg agtatggcgc
     1861 cgacatcgtc gtgcactcgc tgacgaaatt tctcggcggc cacggcaatt cgatcggcgg
     1921 cgtcatcgtc gacggcggca ccttcaattg gtcgcgcgag aagcgctatc cgatgctgtc
     1981 cgaaccgcgg ccggaatatc atggcatcgt gctgcacgaa accttcggca attttgcctt
     2041 cgctatcgct tgccgcgtgc tcgccttgcg cgatctcggg ccggcactct ctccgttcaa
     2101 tgcgtttctc attctcaccg gcatcgagac gctgccgctg cgcatgcagc ggcactgcga
     2161 caatgccctg gcggtggcgc aatggctcgc cgatcagcgc gaggtcgcat gggtgagcta
     2221 tccaggactc gcgggcgacc gctaccacaa tctggccaag aggtacgtgc cgaagggcgc
     2281 gggctcctgc ttcacattcg ggctcaaagg cggctacgac gccggcgtca ggctcgtctc
     2341 caacgtgaag ctgttctcgc atctcgccaa tatcggcgac acccgctcgc tgatcattca
     2401 tcccgcctcg accacgcacc gccagctcac cgacgcgcag aaaatccaag ccggcgccgg
     2461 ccccgacgtc gtccgccttt cgatcgggct cgaggataag gctgacatca tcggcgatct
     2521 cgagcaagga ttggctgcgg cctgacgacc ggacgcggga tcttgcgtcc ccttacttgc
     2581 gcaacgtgcg cgcgacatag tcgcgaacgc gcgcgagcgt ctccggcgcg gtccagatct
     2641 gctcgaccgc ggcatcgaca tccgccacct gcatacgctg caatgccggc tggcggatct
     2701 gccgtttgct caaggcgaag gctttcggcg ggagcgccg
//
LOCUS       DATCWM010000339         4204 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_283288, whole genome shotgun sequence.
ACCESSION   DATCWM010000339 DATCWM010000000
VERSION     DATCWM010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4204
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_283288"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..387
                     /locus_tag="VIQ50_06500"
     CDS             <1..387
                     /locus_tag="VIQ50_06500"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEY9360066.1"
                     /translation="TIGVKLALPDRPVLGLIGDGSALYTCQGLWTAARYRIGAVFVIL
                     NNSSYRILKQRLHAMRGLAEQADSYVGMELVDPKIDFVSLARSLGVMAERAKTVHETT
                     DLIAQAFKNGDPMLIDVELDRAFKPM"
     gene            492..1457
                     /locus_tag="VIQ50_06505"
     CDS             492..1457
                     /locus_tag="VIQ50_06505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY9360067.1"
                     /translation="MLNLSRRDFVVSTAMAAALGLNARLAVSPAFAQKTPDPAKPFVT
                     YKVGAAEVTALYDGIWEKPHDPAFIANASVDDVKTAMVKAGLPADFVSIPFTVLVIKT
                     GGKTIMCDSGTGGQVQPTAGKLAANMKAAGIDPAKIETILISHCHPDHIFGLMEKDTN
                     KPVYPNAELIVSDVEYKFWTDPAVIDRLPEARKGLARRIQAVFPTWKNIRQVAGEPEV
                     APGIRLVNSPGHTPGHRAFHLSSGANQLMISNDTAYVPALVVSNPGWHGQYDQDAALA
                     EASRRKLLDRVIADKVMICGYHFPFPGAGTIAKDGSGYALSVMKT"
     gene            1503..1952
                     /locus_tag="VIQ50_06510"
     CDS             1503..1952
                     /locus_tag="VIQ50_06510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004117348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY9360068.1"
                     /translation="MKTPALWISALLVGVSLAATGAHAVDNVTSRDAPDLTSVRAKIK
                     AKDYKAALAELTPMLETHQHADVYNLMGFALRKTGDYKQAYTFYRKALDFDPDHKGAL
                     EYLGELYVETGQVEKARENVVLLKKLCPGGCEELADLEHAIASAKVN"
     gene            1962..2414
                     /locus_tag="VIQ50_06515"
     CDS             1962..2414
                     /locus_tag="VIQ50_06515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014331186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEY9360069.1"
                     /translation="MRSSVMAAAALVGRLLLAAIFLHEAWSKFAAYAAALAYMQAFGV
                     PGQLLPLAIAVELGCGLLILCGYHTRAAALVLAGFCLATAVLFHGKFGDRNQLLHFEK
                     DLAIAGGLLVLFAHGAGAWSLDALRSVVTAASPQVSGHRSGPDLAAHS"
     gene            2546..3865
                     /locus_tag="VIQ50_06520"
     CDS             2546..3865
                     /locus_tag="VIQ50_06520"
                     /inference="COORDINATES: protein motif:HMM:NF004785.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEY9360070.1"
                     /translation="MQKIQWPGSGKSTYFRNRQTLLVMTASAALLAGIASADALPFDQ
                     QWPTQQPQRLRSVAKPNGLVVATREKHPAKAKPGAEDVAAKAKGVLSVIISIDRQQLT
                     LYSDGQPIARSRVSTGVPGHPTPTGVFSIIQKDRWHRSNIYYNAPMYFMQRITWSGVA
                     MHEGVVPNSPASHGCIRLPGSFARQMWGITKLGVRVIVARNELTPSTISNERLFTVKR
                     EPAEPKGEAQANLPETVGGTANAFELAQLSAAKRDGQAFNTASDVSKPLSPALDAMAF
                     AFGTPRETTGPELKPVEPRPLKPGPISVFISRKEGKLFVRKGFEPVFDVPVTFEQPDR
                     PLGTHVFTALALNDDNTTLRWNVVSMSGAGPAPAKKSAKGKHVEPVAAPAAPASNASE
                     ALGRVTIPPDALERISELMSPGASLIISDKGLGPETGKGTDFIVLTR"
     gene            complement(3941..>4204)
                     /locus_tag="VIQ50_06525"
     CDS             complement(3941..>4204)
                     /locus_tag="VIQ50_06525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent dehydratase"
                     /protein_id="HEY9360071.1"
                     /translation="RQPLIAADPAALTLPEMIAALRGGLGRSPGLVPVPPALLKAALH
                     AAGRTETYQRLAGSLVAEPAALLKLGWKPPVTTAQALAALARS"
BASE COUNT          753 a         1396 c         1311 g          744 t
ORIGIN      
        1 acgatcggcg tcaagcttgc cttgcccgat cggccggtgc tcggcctgat cggcgacggc
       61 agcgccctct atacctgcca agggctttgg accgccgcac gctaccgcat cggcgccgtc
      121 ttcgtgatcc tcaacaacag ctcgtatcgt atcctcaagc agcgcctgca tgcgatgcgc
      181 gggcttgccg agcaggccga cagctacgtc ggcatggagc ttgtcgatcc caagatcgac
      241 ttcgtctcgc ttgcgcgttc gctcggcgtt atggcggaac gtgccaagac cgtgcacgag
      301 accaccgatc tgattgcgca ggcattcaag aacggcgacc cgatgcttat cgacgtcgag
      361 ctcgatcgcg cgtttaagcc gatgtgatcg ctttcgtttc cggccgggaa taaagcacca
      421 gcagggcgag tctccacccc gtcggcgcgc gtccgccggc actttcgaat tttgtctcga
      481 ggagatgtcc tatgctcaac ctgtcgcgtc gcgacttcgt ggtttccacc gccatggcgg
      541 ccgcgctcgg cctcaatgcg cggctcgcgg tatcgccggc cttcgcgcag aagacgcccg
      601 atccggccaa gcctttcgtc acctacaagg tcggcgcagc cgaagtcacc gccctctacg
      661 acggcatctg ggagaagccg cacgacccgg cattcatcgc caacgcttcg gttgatgacg
      721 taaagacggc gatggtgaaa gccggactgc ccgccgactt cgtctcgatc ccgttcaccg
      781 tgctggtgat caagaccggc ggcaagacca tcatgtgcga cagcggcacg ggcggacaag
      841 tgcagcccac cgccggcaag ctggcagcga atatgaaggc ggccggcatc gaccccgcca
      901 agatcgagac tattctcatc tcccattgcc atcccgatca catcttcggg ctgatggaga
      961 aagacaccaa caagccggtg taccccaacg ccgaactgat cgtttcggat gttgaataca
     1021 aattctggac cgacccggcg gtgatcgacc ggctgcccga agcgagaaaa ggcctagcgc
     1081 gtcgcatcca ggccgtcttc ccgacctgga agaacatccg ccaagtcgcc ggcgagcccg
     1141 aggtggctcc cggcatccgc ctcgtcaact cgccgggtca cacgcccggc catcgcgcct
     1201 tccacctgtc gtccggcgca aaccagctca tgatctccaa cgacacggcg tatgtgccgg
     1261 cgctggtggt gtcgaacccg ggctggcacg gccaatacga tcaagacgcc gctcttgccg
     1321 aggcttcgcg ccgcaagctg ctcgaccgcg tgatcgccga caaggtcatg atctgcggtt
     1381 atcacttccc gttccccggc gctggcacca tcgccaagga tggcagcggc tatgcgttga
     1441 gcgtcatgaa aacgtgagcg gcagcggcgg cacgtggctc acaccgaaac atggagatca
     1501 tcatgaagac gcctgcgctt tggatttcgg cgttgctcgt cggcgtgtcg cttgccgcga
     1561 ccggcgcgca cgccgtcgat aacgtcacct cgcgcgacgc gccggacctc acttcggtcc
     1621 gcgccaagat caaggccaag gattacaagg ctgcgcttgc cgagctgaca cccatgctcg
     1681 agacgcatca gcacgctgac gtgtacaacc tgatgggctt tgccctgcgc aagaccggcg
     1741 actacaagca ggcctacacc ttctatcgca aggcgctcga tttcgatccc gatcacaagg
     1801 gcgcgctcga atacttgggc gagctgtacg tggaaaccgg acaagtcgag aaggcgcgcg
     1861 agaacgtcgt cttgctgaag aagctctgtc cgggcggatg cgaggagctc gccgatctcg
     1921 aacacgcaat cgcctcggcc aaggtcaatt gaggctttac gatgcggtca tccgtgatgg
     1981 cggcggccgc gcttgtcggc cgcctcttgc tcgcggcgat attcctgcac gaggcctgga
     2041 gcaagtttgc cgcctacgcg gcggcgcttg cctatatgca ggctttcggc gtgcccgggc
     2101 agctcttgcc gctcgcgatt gcggtcgaat tgggctgcgg tcttttgatc ctatgcggtt
     2161 accacacccg ggccgccgcg ctggtcctcg ccggcttttg cctcgccacc gccgtcctgt
     2221 ttcatggtaa atttggcgat cgcaaccagc tccttcactt cgagaaggat ctggcgatcg
     2281 ccggcgggct cctcgtgctg tttgcccatg gcgccggcgc atggtccctc gacgcgttgc
     2341 gctcggtggt aacagcggcc tccccgcagg tatcgggaca caggagcggc cctgatctag
     2401 ccgctcattc ctaagccacg gcctcttatc gaaattcacc cactgcggcc ctcgaacctt
     2461 tcggcctccc gcgcgactaa ttgtctgagc ccaatcgggc cttagaggag ttcctcgccg
     2521 caacggcacc agaagggggg ccttcgtgca aaaaattcag tggcccgggt cgggcaagtc
     2581 gacctatttc cgcaatcgcc agaccctatt ggtcatgacg gcgagcgccg cgttgctcgc
     2641 cggcatcgca tctgccgatg ctcttccgtt cgatcagcag tggccaacgc agcagccgca
     2701 gcgattgcgg tcggtggcca agcccaacgg cttggtcgtg gcaacgcgcg agaagcaccc
     2761 ggcaaaggca aagcctggcg ctgaggacgt cgccgccaaa gcgaaggggg tgctgagcgt
     2821 catcatctcg atcgaccggc agcagctcac cctctattcg gacggccagc cgatcgcccg
     2881 ttcgcgcgtt tcaaccggcg tgccgggcca tccgacgccc accggtgtgt tcagcatcat
     2941 tcagaaggat cgctggcacc gctccaatat ctactacaac gcgccgatgt atttcatgca
     3001 gcggatcacg tggtcgggcg tggccatgca tgagggcgtg gtcccgaact cgccggcatc
     3061 gcatggctgc atccgtctgc ctgggtcgtt cgcgcgacaa atgtggggca tcaccaagct
     3121 cggcgtgcgc gtcatcgttg cccgcaacga gcttacgccg tccacgattt cgaacgagcg
     3181 cttgttcacg gtcaagcgcg agccggccga accgaagggc gaggcgcaag ctaacttgcc
     3241 ggagacggtg ggcggtacgg cgaatgcctt cgagctggcg cagctcagtg cggccaagcg
     3301 cgacgggcaa gcattcaaca cggcgtcgga cgtctccaaa cctctcagcc cggcgctcga
     3361 cgccatggcc ttcgcgttcg ggacgccgcg cgaaacgacg ggaccggagc tgaagccggt
     3421 tgagccgcgg ccgctcaagc cgggtccgat ctccgtgttc atcagccgca aggaaggcaa
     3481 actgttcgtg cgcaagggct ttgagccggt gttcgatgtg ccagtcacgt tcgaacagcc
     3541 agaccggccg ctcggcacgc acgttttcac tgccttggcg ctcaacgacg acaacacgac
     3601 cctgcgctgg aacgtggtat cgatgtcagg cgcaggcccc gcgccggcga agaagtcggc
     3661 gaagggcaag cacgtcgagc cggtagcagc gccggcagcg ccggcatcga acgcgagtga
     3721 ggcgcttggt cgcgtcacta ttccgccgga tgcgctcgag cgcatttccg aattgatgtc
     3781 gccaggtgcc tcgctcatca tctcggacaa gggacttggg cccgagaccg gcaagggcac
     3841 ggacttcatc gtgctgacac gctgacgccg cgcaccaaac ctgttttgcc atgcccggca
     3901 cgcagccagt ctgcgctgcc gggcatgtgc gtctggggca tcagcttcgc gcgagggcgg
     3961 cgagcgcttg cgccgtggtg accggcggct tccagcccag cttgagcagc gcggcgggct
     4021 ccgcgaccag cgagccggcg aggcgttggt aagtttccgt gcggcccgcc gcgtgcagcg
     4081 cggccttgag caaggccggc ggcacgggaa cgaggccggg ggagcgtccc aatccgcccc
     4141 ggagggcggc aatcatctcg gggagggtca gcgccgccgg atcggcggca atgagcggct
     4201 gccg
//
LOCUS       DATCWM010000340         2943 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_34932, whole genome shotgun sequence.
ACCESSION   DATCWM010000340 DATCWM010000000
VERSION     DATCWM010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2943)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2943)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2943
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34932"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            99..2822
                     /locus_tag="VIQ50_06530"
     CDS             99..2822
                     /locus_tag="VIQ50_06530"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEY9360072.1"
                     /translation="MANKLTGSYDAVAQISRRQLNGLLASLHQNGASDQPPLQLGHNG
                     VLRIGDPKPTTPDLVRLRLRNWIRNFQSAGGPANLDDLRARLAVNAPPGAAKMIEEEF
                     SKLEKGRPGRQPSKKPRGRVKLQLSSPTIILADGATSEATLLTDVRAHYDPDSGAGQI
                     AAADHPLHGEVRAAFELSVLSSASGRKLSVRPSSKDNKIEFIAASGTGLTNAEVSRIS
                     GEVRDIVRERFTPQPVDLPPDFPFSEFKVIGSGANQVIALPIQLSDAPLPTGRIQNLD
                     ENFADSSGFAFAASKEYVEDLLEPLFDEVSKAVRNFKREITPIDVTVFGIPLKQTIKF
                     TLQLKSGPSLEWESGRIKLSAHLKLVVRPGADVSFTFTQKFKLALNASTQQVTLEADG
                     NPSVNTNLPFNFLHEAFENAIKDARDHALSGGAAPVNNAVNQVFAGARQKLIGGLKVF
                     DESASATFTAVKITKDGLIVRGEIGSGPRQAPVVQFNEIDEGRAFLALGTWIPGGKID
                     RYIWSWVGHSGKGPAKLFSGSHQHSTETHRFIFPRPAGMDPLGSVSLRIEGTETGADG
                     LTVPIAAESPPQVRDAFGTIVESPAWWEPIMTPIWLEESKRDAKLKDLIAGHVPLQSD
                     RPRGGELTHNTLVYFPDWRADEPLEPVARAMAAMRRRKVSLVLIVVLPQDALDSRRSD
                     LEVKLRAVSSRFAGRLMVTMDQEGGWSRAFAVAGRPSAHLVNARRELAWNSRGDIEPA
                     AMAAAFDKHILPAPAPRSHALQPKVSGCGCHGAPDIIVEDERGQRFALHRMRGRNVIL
                     NFFQSWSAPCIRELQRLQALQERRPKGGGPFVVALHGGNDEKALADLRKRHGLTFPLV
                     QDRDQVIARQYGITCWPTTITINPDGSIGRMQLGTVREAKPATRPAKSTSA"
BASE COUNT          562 a          991 c          892 g          498 t
ORIGIN      
        1 ggggatcgcc gaagccggtg tgccggatcg gacgacaggt tacccgggcg tcgtcccgga
       61 caacctcttc ctcgtcgaga tcatcgaggt cttgtagcat ggccaacaaa ctcaccggat
      121 cctacgacgc cgtggcgcag atcagccggc ggcaactcaa cggcctgctc gcgtccctgc
      181 accagaacgg cgcaagcgac cagccgccac tgcagctcgg gcacaatggg gtgctccgaa
      241 tcggcgaccc aaagccaacc acgcccgacc tcgtccggct tcgtctccgc aattggattc
      301 gcaatttcca gtcggcgggc ggccctgcga acctggatga cctccgcgcc cgtctcgcgg
      361 tcaatgcgcc cccgggggcc gccaagatga tcgaggagga attctccaaa ttggagaagg
      421 gccggccggg aagacagccg tcaaagaaac cgcgtggccg cgtgaagctg caactttcct
      481 cgcccaccat catcctggcc gacggcgcca cctccgaagc gacgctgctg acggatgtcc
      541 gagcccatta cgatccggat tccggagccg ggcaaattgc cgccgcagac catccgctgc
      601 atggcgaggt gcgcgccgcg ttcgaacttt cggttctctc gagcgcatcc ggccggaaat
      661 tgtccgtgcg cccctcgtcc aaggacaaca agattgagtt catcgccgcc tcgggcacgg
      721 gcctcacgaa cgccgaagtg tcgcggatct ccggcgaggt gcgggacatc gtgcgcgaga
      781 gattcacgcc gcagccggtc gatcttccgc ccgatttccc cttctccgaa ttcaaggtca
      841 tcggcagcgg tgcgaaccag gtcatcgccc tgccgatcca gttgtcggac gctccattgc
      901 ccacaggccg catccaaaat ctcgacgaaa acttcgccga ttcgagcggc ttcgcgttcg
      961 ccgccagcaa ggaatatgtc gaggacctgc tggagccgct cttcgacgag gtgtccaagg
     1021 cggtccgcaa cttcaagagg gaaatcaccc ccatcgacgt gacggtcttc ggcattccct
     1081 tgaagcagac catcaaattc acgcttcagc tcaagtcggg tccctcgctc gaatgggaat
     1141 ccggcaggat caagctctcg gcacatctca agctcgtggt gcggcccggc gccgacgtgt
     1201 ccttcacgtt tacccagaaa ttcaagctcg cgctcaatgc ctcgacccag caggtgacgc
     1261 tggaagccga cggcaatccc tccgtgaaca cgaatctgcc gttcaatttc ctgcacgagg
     1321 cgttcgagaa tgcgatcaag gacgcgcggg accacgcgtt gtcgggtggt gccgcgccgg
     1381 tgaacaacgc ggtcaatcag gttttcgccg gcgccaggca gaagctcatc ggcggtttga
     1441 aggtctttga tgaatcggcc tccgcgacct tcaccgccgt caagatcacc aaggacgggc
     1501 tgatcgttcg cggcgagatc ggaagcggac cgcgtcaggc gccggtggtg caattcaacg
     1561 agatcgacga aggccgggct tttttggcgc tggggacatg gattcccggg ggaaagatcg
     1621 atcgttacat ctggtcctgg gtcggacatt ccggaaaggg accggcaaag ctcttttccg
     1681 ggtcgcacca acattccacc gagacccacc gcttcatctt tccaaggccg gccggaatgg
     1741 acccgctcgg cagcgtcagt ctccgcatcg agggaacgga aaccggagcg gatggcctga
     1801 ccgtgcccat cgcggcggag agcccgcccc aggtccgcga tgctttcggg accattgtcg
     1861 aatcgcccgc ttggtgggag ccgatcatga cgccgatctg gctcgaggaa agcaagcgcg
     1921 acgccaagct aaaggacctc atcgcgggtc acgtccccct gcaaagcgac cggccccgcg
     1981 gcggcgaact cacccacaac acactggtct attttccgga ctggcgcgcg gatgaaccgc
     2041 tcgaacccgt ggcgcgcgcc atggccgcga tgcggcgccg caaggtctcg ctcgtcctca
     2101 tcgtggtgct gccgcaagac gcgctcgaca gccgccgcag cgacctcgaa gtcaagctgc
     2161 gcgccgtgtc cagccggttc gcagggcgct tgatggtcac catggaccag gaaggcggat
     2221 ggtcacgcgc cttcgcggtc gccgggcgac cttcggcgca cctcgtgaat gcacggcgcg
     2281 agctcgcatg gaactcccgg ggcgatatcg aacccgcggc gatggcggcg gcgttcgaca
     2341 aacacattct tcccgcgccc gcaccacgat cccatgcgct gcagcccaag gtttccggct
     2401 gcggctgcca cggcgccccc gacatcatcg tcgaggatga acgcggacaa cgcttcgcgc
     2461 tgcaccggat gcgcgggcgc aacgtcatcc tgaatttctt ccaatcctgg tccgcgccat
     2521 gcatccggga attgcaacgt ctgcaagcgc tgcaggagag gcgaccgaag ggcggcggac
     2581 cgtttgtcgt ggcattgcac ggcgggaacg acgagaaggc gctcgcggat ctgcgcaaac
     2641 gccatggcct cacctttcct ctcgtgcagg accgagacca ggtgatcgcg cgtcaatacg
     2701 ggatcacctg ctggcccacc acgatcacta tcaacccgga cggctccatc ggccgcatgc
     2761 aactcggtac ggttcgggaa gccaaaccgg caacgcgtcc cgcaaaatcg acttccgcgt
     2821 gagcggcgaa gacatgagct tctggatcgc tgcctttctt ctcattcccc tcgccgacca
     2881 agcgatcaag gcactgctgc gccagcggct cggcgaccgc gtcgtttcgc tgggaccgtt
     2941 ggg
//
LOCUS       DATCWM010000341         3063 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_7939, whole genome shotgun sequence.
ACCESSION   DATCWM010000341 DATCWM010000000
VERSION     DATCWM010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3063
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7939"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..130
                     /locus_tag="VIQ50_06535"
     CDS             <1..130
                     /locus_tag="VIQ50_06535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360073.1"
                     /translation="DAPEIDGAVHVTSRRPLRLGEIATVRIERTDQYDLYGTVVGF"
     gene            complement(127..1422)
                     /locus_tag="VIQ50_06540"
     CDS             complement(127..1422)
                     /locus_tag="VIQ50_06540"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012591140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004015 -
                     adenosylmethionine-8-amino-7-oxononanoate transaminase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HEY9360074.1"
                     /translation="MSRKKGAMETWYESGLAHVWLPYAQMKTARAPLPVARTHGSRIV
                     LADGRELIDGIASWWTACHGYNHPHIRQAVERQLALMPHVMFGGLVHEQALTLARRLV
                     ALVPGDLGRVFFSESGSVAVEIAMKMAVQFWVNQGVPKRKKFVTFRGGYHGDTTGAMA
                     VSDPGVGMHGRFRGLLPEHHVVKLPQDDETAASFARCLERHADELAGMIIEPLVQGAG
                     GMRFHAEPVLRRLREAANRYQLILIFDEIFTGFGRTGGLFACEAAGAFPDIITLSKAL
                     TGGTLPLAVTIARDKVFDAFWSDEPSDALPHGPTFMANALACAAANASLDLFEREPRL
                     RQVADIALALEHGLAPCRGLPGVKDVRVKGAIGVVELERIDDLEGLRARFVAEGVFVR
                     PFGSIIYLTPAFTIGAEELAKLTGTVVNLLHRGGQLGAS"
     gene            1473..2651
                     /gene="bioF"
                     /locus_tag="VIQ50_06545"
     CDS             1473..2651
                     /gene="bioF"
                     /locus_tag="VIQ50_06545"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008710 - 8-amino-7-oxononanoate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HEY9360075.1"
                     /translation="MHSLDEFATTKLGELQRGSLRRALVDTTRTPGIWVLRNGRRLLS
                     FCCNDYLNLTHHPEVKEAAIAALRTYGVGAGASRLVSGNHPLLGELEARLARLKEAEA
                     AYVFGSGYLANLGIIPALIGPGDLVLIDELAHACLWAGARLARAAVVPFRHADVRHAQ
                     ALLTELRQHHRNVLIATDGVFSMDGDIAPLHALAALAQRHDAWLMSDDAHGVGVVGGG
                     RGSNFVPPIKADVPLQMGTLSKALGAYGGYLCASAAVIDLMRNRARTAVYSTGLPPAM
                     AAAAIAALDVIEREPGYAALALTKAQAFARCAGLPEPASPIVPVLLGEAEAALKASRL
                     LEDQGFLVVAIRPPTVPGGTARLRLTFTAQHPDREVERLAELVRTHVLAHAPASAADA
                     "
     gene            2651..>3063
                     /locus_tag="VIQ50_06550"
     CDS             2651..>3063
                     /locus_tag="VIQ50_06550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012591142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HEY9360076.1"
                     /translation="MSAVFVTATGTDIGKTFVTAGVIRHIRGKGGAIAAVKPIVSGFD
                     PDAWQESDPAVLLAALGRPVTLAEVERISPWRFKAPLSPDMAGRREGRTIQFRDVVEF
                     CRDAAAAQRGLLLIEGIGGTMVPLDDRRTVLDLMSV"
BASE COUNT          503 a         1054 c         1000 g          506 t
ORIGIN      
        1 cgacgcgccg gagatcgacg gcgcggtcca tgtgacaagc cgccgcccgc tgcggctcgg
       61 cgagatcgcg acggtgcgga tcgagcgcac cgatcaatac gacctgtacg gtaccgtcgt
      121 cggcttttag cttgccccga gctggccgcc tctgtgcaac aaattcacga ccgtacccgt
      181 caatttcgcg agttcctccg cgccgatcgt gaatgctggc gtgagataga tgatggaccc
      241 gaacgggcgc acgaaaaccc cctccgcgac gaagcgcgcg cgcaagccct cgagatcgtc
      301 gatgcgctcg agctccacca cgccgatcgc tcccttgacc cgtacgtcct tgacgccggg
      361 aagaccgcga caaggcgcaa ggccatgctc cagggcgagc gcgatatcag caacttgccg
      421 caggcgcggc tcgcgctcga acaggtcgag cgacgcgttg gcggcggcgc aggcgagcgc
      481 gttggccatg aaggtcggcc cgtgtggcag cgcgtcgctg ggctcatccg accagaacgc
      541 atcgaatacc ttatcgcggg caatcgtgac cgcgagcggg agggtccccc ccgtcaaagc
      601 cttcgacagc gtgatgatgt cgggaaaggc cccggccgcc tcgcaggcga acaagccacc
      661 ggtgcgaccg aagccggtga agatttcgtc gaagatcaag atgagctgat agcggtttgc
      721 cgcctcgcgc aggcgtcgca gcaccggctc cgcgtgaaag cgcatgccgc ccgcgccctg
      781 taccaacggc tcgatgatca tgccggcgag ctcgtccgcg tgacgctcga ggcagcgcgc
      841 aaagctcgcg gcggtctcgt cgtcttgcgg caacttgacg acgtgatgct cggggagaag
      901 gccgcggaaa cgcccatgca tcccgacgcc gggatcggaa acggccatcg cgccggtggt
      961 gtcaccatga tagccgcccc tgaacgtcac gaatttcttt cgcttgggca cgccttggtt
     1021 gacccagaac tgcaccgcca tcttcatggc gatctcgacc gcgaccgagc ccgactccga
     1081 aaagaacacg cggccgagat cgccggggac gagcgccaca agccgccgcg cgagtgtgag
     1141 cgcctgctcg tgcaccaacc cgccgaacat cacgtgcggc atgagcgcga gttgacgctc
     1201 gaccgcctgc cgaatgtgcg gatgattgta gccgtggcaa gcggtccacc acgacgcaat
     1261 gccgtcgatg agctcgcgtc catcggcgag cacgatgcgg ctgccatggg tgcgcgccac
     1321 cggcagcggc gcgcgcgccg tcttcatctg cgcatagggc agccagacgt gggcgagccc
     1381 ggactcatac cacgtttcca tagctccctt ttttcgcgac attcgcccct ttcaatgcaa
     1441 agcttgaccg gcatgacggc ttgagttcga ggatgcactc acttgacgaa ttcgcgacca
     1501 ccaagctcgg cgaacttcaa cgcggcagtc tacgccgcgc gctcgtggat accacccgca
     1561 cgccgggaat ttgggtgctg cggaacgggc gccggctgct gtcgttctgc tgcaacgatt
     1621 acctcaacct gacccatcat cccgaggtca aggaggcggc catcgccgcg ctgcgcacct
     1681 acggagtggg cgccggtgcc tcgcgccttg tgagcggcaa ccatcccctg ctcggcgagt
     1741 tggaagcgcg gctcgcgcgg ctcaaggagg cggaggcggc gtacgtgttc ggctccggct
     1801 atctcgccaa tctcggcatc atccccgcac tgatcggacc cggcgatctc gttctcatcg
     1861 acgagctggc acatgcttgc ctgtgggccg gtgcgcgcct cgcgcgcgca gcggtcgtgc
     1921 cgtttcgcca cgccgacgtt cgccacgccc aggccctgct taccgagttg cggcagcatc
     1981 accggaacgt gctgatcgcc accgacgggg tcttttccat ggacggcgat atcgccccct
     2041 tgcacgccct cgcggcgctg gcgcagcgtc acgacgcctg gctcatgtcc gacgatgcgc
     2101 acggcgtcgg cgtcgtgggc ggcggccgcg gctcaaattt cgtgccgccg atcaaggccg
     2161 acgtcccgct gcagatgggc accctctcca aggcgctcgg cgcctatggc ggctatctct
     2221 gtgcctccgc cgcggtgatc gatctcatgc gcaatcgcgc gcgcaccgcc gtttattcga
     2281 ccggacttcc gccggcgatg gccgcggccg ccatcgccgc gctcgacgtg atcgaacgag
     2341 agcccggcta tgccgccctt gcactgacaa aggcccaggc ctttgcccgc tgcgccgggt
     2401 tgccggagcc ggcgagcccg atcgtgccgg tactgctggg agaggccgaa gcggcgctga
     2461 aagcctcgcg gctgctggaa gatcagggat tcctggtcgt cgccatcagg cctccgacgg
     2521 tgccgggtgg caccgcgcgc ctgcggctga cctttaccgc ccagcacccc gatcgcgagg
     2581 tcgaacggct ggccgagttg gttcgcacgc atgtcctcgc ccatgccccg gcgagcgccg
     2641 ccgacgcgta atgagcgccg tcttcgttac cgccaccggc accgatattg gcaagacctt
     2701 cgtcacagcg ggagtgatcc ggcatatccg gggcaagggc ggcgcaatcg ccgcggtcaa
     2761 gccgatcgtc agtggtttcg atcccgacgc gtggcaggag agcgatcccg ccgttttgct
     2821 cgccgcgctc gggcgccccg tgacgttggc ggaggtagag cggatctcgc cgtggcgatt
     2881 caaggcgccg ctctcgccgg acatggcggg caggcgcgag ggccgcacga tccaatttcg
     2941 cgacgtggtg gagttttgtc gcgatgcggc agcggcacag cgcggcctgc ttctgatcga
     3001 gggcatcggg gggaccatgg tgccgctcga tgaccggcgc accgtcctcg atttgatgtc
     3061 tgt
//
LOCUS       DATCWM010000342         2764 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_13268, whole genome shotgun sequence.
ACCESSION   DATCWM010000342 DATCWM010000000
VERSION     DATCWM010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2764
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13268"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(13..138)
                     /locus_tag="VIQ50_06555"
     CDS             complement(13..138)
                     /locus_tag="VIQ50_06555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360077.1"
                     /translation="MLAERVDFCVLAVGFAIAGCWSMVSGAVVVLALRAFGLGVG"
     gene            394..1059
                     /locus_tag="VIQ50_06560"
     CDS             394..1059
                     /locus_tag="VIQ50_06560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360078.1"
                     /translation="MFFLVPLIVLAAVALSAFGYVAYVLWPRWSAPRLDAPPLPITVA
                     GVAFNLPPAAIRVAAQRRAGAQERVDLVFLWPSLQPPDPESKPPTLRGTEPASSRTSA
                     RVFMTIAAAGDTLAPADRALTIYPHYTAAEPLRGPDGLSVLAFRDATPYAGEDLLYQP
                     GTAGFLVRCTHGAGPVPSTCLYERRIERADVAVRFPRDWLDDWRMVAGTLDRLIASLR
                     PPH"
     gene            complement(1133..1387)
                     /locus_tag="VIQ50_06565"
     CDS             complement(1133..1387)
                     /locus_tag="VIQ50_06565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009799981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3126 family protein"
                     /protein_id="HEY9360079.1"
                     /translation="MKITLGDASTTGPDLKQLDAYLKRKFDTERIRVVPRSRKKDSAE
                     VYVGDEYIGVLFFDEKDARSTYFELPILALDLDEPGLLKG"
     gene            complement(1379..1567)
                     /locus_tag="VIQ50_06570"
                     /pseudo
     CDS             complement(1379..1567)
                     /locus_tag="VIQ50_06570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611186.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3126 family protein"
     gene            complement(1586..2407)
                     /gene="cysE"
                     /locus_tag="VIQ50_06575"
     CDS             complement(1586..2407)
                     /gene="cysE"
                     /locus_tag="VIQ50_06575"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009001 - serine O-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HEY9360080.1"
                     /translation="MAQRQVRAEALDKVDPVWARIRGEAEEIVRRETELATLIYSTIL
                     HHDFLEAAVVHRVAERLDSPEVSAEMIRQAYGDALEAEPAIGEAFRADIVATVDRDPA
                     TNRFLEPVLYFKGFHAIQAHRLAHWLWNKGRKDFAYYLQSRSSAAFQTDINPAVSIGR
                     GIFLDHATGLVVGETAVIEDDVSMLQEVTLGGTGKEAGDRHPKIRRGVLIGAGAKILG
                     NIEIGHCARIAAGSVVLKPVPHNTTVAGVPARVIGPNSCSEPSRTMDHLFEDNDG"
BASE COUNT          507 a          954 c          814 g          489 t
ORIGIN      
        1 ccgccaacgc gttcagccaa cgccgagacc gaatgcccgc agcgccaaca ccacgaccgc
       61 gccggagacc atgctccagc agccggcgat ggcaaagccg accgcaagca cgcaaaagtc
      121 aacccgttcc gctagcatga cccccacccc aatgtccccg cctgatcctt ggcacattgc
      181 gacgccgcgc gccacaacat ccttaatgaa gggttaattg cgccgcgatc gatcaccgtt
      241 acggcagcaa tcgcagttcc agggcgcggc catcgcgaag cctgattgct gatgagtgat
      301 gaccgagcac tgattcgcgc aaagcggcgc cccatgacga cggctcactt caaccgacag
      361 cgcgctcggc cgttgcaacg gcgcagcggc agtatgtttt tcctggttcc gctcatcgta
      421 ctcgccgccg tcgcgctgag cgccttcggc tatgtcgcgt atgtgctgtg gccgcgctgg
      481 tctgcaccac gcctcgatgc cccgcccctg cccatcaccg tcgcgggtgt cgcattcaac
      541 ctgccgcccg ccgcgatccg cgtagcagcc cagcgccgag cgggcgcgca ggagcgcgtc
      601 gatcttgttt tcttgtggcc gtcgctgcaa ccacccgatc ccgagtccaa gccacccacc
      661 ctgcggggca cggagccggc gtcgtcacga acgtcagcgc gcgtattcat gaccatcgcc
      721 gccgccggcg atacgctcgc ccctgccgac cgcgcgctga ccatctatcc gcactatacc
      781 gcagccgagc cactgcgtgg cccggacgga ctttccgtgc tcgcattccg agacgccacg
      841 ccttacgcag gtgaggacct cctctatcag cccggaacag cgggttttct cgtacgctgc
      901 acccacggtg ctggccccgt gcccagcacg tgcctctatg aacggcgcat cgaaagggcc
      961 gacgtcgcgg tgcgcttccc gcgcgattgg ctcgacgact ggcgcatggt tgccgggacg
     1021 ctcgaccggc tgatcgcaag tctgcggccg ccgcactgat ctcgtcgcat cgaacgttgc
     1081 cgccggccgc cgacagcgcg gctccggcac gcggtcccaa ttggccgccg cgctatcctt
     1141 tgagaagtcc cggctcgtcc aaatcgagcg ccaagatcgg cagctcgaaa taagtcgagc
     1201 gcgcgtcctt ctcgtcgaag aacaacacgc cgatatattc gtcgcctacg tagacttccg
     1261 ccgaatcctt tttgcgggag cgcggcacga cgcggatgcg ctcggtgtcg aacttgcgct
     1321 tgagataggc gtcgagttgc ttgaggtcgg gacctgtcgt cgaggcgtcg cccaaggtga
     1381 tcttcatctc gaaattatag gaacgctcgt catcctcttc atcttcgtcg agaatgagcg
     1441 agccgatgcg ctcctccccc acgaacacat cggcggcgtc cgccttggtc ggcacgacgc
     1501 ggattcgcgc gttgccgaat aaccgcctga gataggcgtc gagcttcctg acttcctgaa
     1561 cgtccaccgc tcgcgccccc tcgcctcagc cgtcgttgtc ctcaaacagg tggtccatgg
     1621 tgcgcgacgg ctcagaacag ctgttcgggc cgatcacgcg cgccgggaca ccggcgaccg
     1681 tggtgttatg cgggaccggt ttgagcacaa cggacccggc ggcaatacgt gcgcaatgcc
     1741 cgatctcgat gttgccgagg atcttggcgc ccgcgccgat caaaacgccg cggcggattt
     1801 tcgggtggcg atcgcccgcc tccttgccgg ttccgcccaa cgtaacctcc tgcagcatcg
     1861 acacgtcgtc ctcgatcact gcagtctcgc ccaccaccaa gccggtggca tgatcgagga
     1921 agattccgcg tccgatgctg acggccggat tgatgtcggt ctggaatgct gccgacgagc
     1981 ggctctgcag ataataggcg aaatccttgc ggcctttatt ccatagccag tgggcaagcc
     2041 ggtgcgcctg aatcgcatga aaacctttga agtaaagcac cggctcgaga aagcggttgg
     2101 tcgcgggatc gcgatcgact gtcgccacaa tgtccgcgcg gaacgcctcg ccgattgccg
     2161 gctcggcctc gagcgcgtcg ccgtaggcct ggcggatcat ctccgccgat acctcgggac
     2221 tgtcgagccg ctcggccacg cggtgcacga ccgctgcctc caagaagtcg tgatgcagga
     2281 tggtcgaata gatcaacgtc gcgagctccg tctcgcggcg cacgatctct tcggcctcgc
     2341 cgcgaatacg cgcccaaacc gggtcgacct tgtcgagcgc ctcggctctg acctgacgct
     2401 gggccatcac gggctccgat gcaatttgtt gctatgccca gcttagcaca attcgaccgg
     2461 gcgatagcct atatggaaac gacactggca aaccggaagg tgctcaccac ctcaacgcca
     2521 cggcgggcaa gcggacggga cgggttggcg ctgaaccgat tgattgagac gcccaattca
     2581 caaaggtgcg gtgatgagag gcctaggcct cgcgttcgcc aaaagggccg cacggccact
     2641 gcacctccga acgaagcgca ggtctacgac gaatatagag gcctcactcc cgattctggg
     2701 agttgcgagc aaggaccggc gtgaaactgg acgccatccc cagcgcgcat gaccacattg
     2761 cgat
//
LOCUS       DATCWM010000343         2650 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_126821, whole genome shotgun sequence.
ACCESSION   DATCWM010000343 DATCWM010000000
VERSION     DATCWM010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2650)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2650)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2650
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126821"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1786)
                     /locus_tag="VIQ50_06580"
     CDS             complement(<1..1786)
                     /locus_tag="VIQ50_06580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY9360081.1"
                     /translation="MVLSETCIRRPVLTTLVTASIIVLGIFAYRLLSVAALPAVDFPT
                     ISIQGQLPGASAETMAASVAAPIERQLSTIAGITSLTSSSSLGLTSITIQFDLNRNID
                     GAALDVQTALTVAARKLPVEMTTPPSFRKVNPGDFPIMYISLISPTLPLSVVDEYGEI
                     TLAQQISQLTGVAQVLVYGAQKFAVRVQVDPVAAAARNISLDDIRTVVAKTNSNTPVG
                     TLNGPKQSVTLMASGAMTKAEEYRKVVVAYRNGAPVYLDQVARVIDSVENDKIASWFN
                     NERAIVLAIQRQPDANTVAVVDSVRERLPQYRASIPPSIKMEVLMDRSVSIRESVWSV
                     QETLVIAVVLVIMVIFLFLRSFSATIIPSLAVPVSLIGTCAAMYVFGFSINNMTLLAL
                     TLSVGFVVDDAIVMLENIVRHVEGGMRPFDAALKGAREIGFTIISITFSLIAVFIPVL
                     LMGGMVGRVFREFAVTIAVAIILSGFVSLTLTPMLCARVLHPHREGDKQNIVLRVFEA
                     TFKAGLRGYEWSLDRVLRYKAVTLMVTLATLVLSVWLYIIVPKGFFPTEDTGFISAST
                     EGSSDISFQGMVDLQRQVAQIIRSDPAVD"
     gene            complement(1790..>2650)
                     /locus_tag="VIQ50_06585"
     CDS             complement(1790..>2650)
                     /locus_tag="VIQ50_06585"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY9360082.1"
                     /translation="AMVQQGDLLFTLDSRAIEAQVRQVEGLLAGARANLEQAERDVAR
                     YTELLAKSATTLVTLQNARTQTNIWRASVDSNTAQLENLNILLSYCTIRAPIAGRASM
                     AAVKVGNFVRAVDSPLATIIQTAPVYVTFSLQQGYLPDLRQALANESATIEAIIPGEA
                     RRASGQVTMIENSVDAPTGTVPVRATMPNTDELLWPGTLVTVQLTFREEEAVTVPSTA
                     VQMSQTGSYVFLVDNDVATVRPVEVARVLGSESVLASGLDGGETVVTNGQLLLSNGTK
                     VAARPPKVGS"
BASE COUNT          506 a          814 c          863 g          467 t
ORIGIN      
        1 agtcgaccgc gggatcggag cgaatgatct gcgccacctg ccgctgcaga tccaccatcc
       61 cttggaacga aatatccgac gaaccttcgg ttgaggcgga gatgaagccg gtgtcttcgg
      121 tcgggaagaa gcctttggga acgatgatgt agagccatac cgacagcacg agcgttgcca
      181 gcgttaccat gagcgtcacg gctttgtatc gcaacacccg atcgagcgac cactcgtagc
      241 cgcgcagtcc tgccttgaac gtcgcctcga agacgcgcag tacgatgttc tgtttgtcgc
      301 cctcgcgatg cggatgcagg acgcgggcgc atagcatggg cgtaagagtc agcgaaacga
      361 atcccgacag gatgatggcg accgcgatcg tcaccgcgaa ttcgcgaaac accctgccga
      421 ccatgccgcc catcagcagc accgggatga acacggcgat cagcgagaac gtgatcgaga
      481 tgatggtgaa gccgatctcg cgcgcgccct tgagcgcggc atcgaacggc cgcatcccgc
      541 cttcgacgtg gcgtacaata ttctccagca tgacgatggc gtcgtcgacg acgaacccca
      601 ccgagagcgt cagcgccagc agcgtcatgt tgttgatcga aaagccgaac acgtacatcg
      661 ccgcgcacgt gccgatcagc gacacgggaa ccgcaagcga gggaatgatg gtggccgaga
      721 acgagcgcag gaacaggaag atcaccatga tgaccaagac cacggcaatg acaagcgtct
      781 cctgcacgct ccataccgat tcccggatcg ataccgagcg gtccatgagc acttccatct
      841 tgatcgacgg cggtatggat gcgcggtact gcggcaagcg ctcacggacc gaatccacca
      901 ccgccaccgt attggcgtcc ggttggcgct ggatcgccag cacgatggcg cgctcgttgt
      961 tgaaccagct cgcgatcttg tcattctcca cgctgtcgat gacgcgcgcg acctgatcga
     1021 ggtaaaccgg tgcgccgttg cgataagcga cgaccacctt gcggtactcc tcggccttcg
     1081 tcatcgcgcc cgacgccatc agcgtcacgc tctgcttggg gccgttgagc gttccgaccg
     1141 gagtattgga attggttttg gccacgacag tgcggatgtc gtcgagcgaa atgttgcgcg
     1201 ccgccgccgc cacaggatcg acctgcaccc gcacggcgaa tttctgcgcg ccgtatacca
     1261 gcacctgggc gacgccggtc agctgcgaaa tctgctgtgc gagggtgatc tcgccgtact
     1321 cgtcgacaac ggacaacggc agcgttggcg agatcaaact gatgtacatg atcgggaagt
     1381 cgcccggatt caccttgcgg aagctgggcg gcgtggtcat ttccaccgga agcttgcgag
     1441 ccgcgacggt cagcgccgtc tgtacgtcaa gcgcggcgcc gtcgatattg cggttgagat
     1501 cgaactggat cgtgatcgag gtgaggccga gcgacgacga ggaggtgagc gaggtgatgc
     1561 cggcgatggt ggaaagctgg cgctcgatcg gcgcagccac cgaggcggcc atggtttccg
     1621 cgctcgcgcc gggcagttgt ccctgaatgc tgatggtggg aaagtcgacg gccggcagcg
     1681 ccgcgaccga cagcaagcgg taggcgaaga tgcccaagac gatgatcgag gcggtgacca
     1741 acgtggtcag caccggccgg cgaatgcagg tctccgagag caccatggct tacgatccga
     1801 ccttcggcgg gcgcgcggcc accttggttc cgttggaaag taggagttgg ccgttggtta
     1861 cgaccgtttc accgccgtcg agtccgctgg cgagaaccga ctcgctgccg agcacgcgtg
     1921 cgacctccac cggccgcacg gtcgccacat cgttgtcgac gaggaagacg taggagccgg
     1981 tttggctcat ctgcacggcg gtcgagggca ccgtgaccgc ctcctcctcg cggaaggtca
     2041 attgcacggt gaccagcgta cccggccaaa gcagctcgtc ggtattgggc atggtggcgc
     2101 gaaccgggac cgtgccggtc ggcgcgtcca cgctgttctc gatcatcgtg acttggccgc
     2161 tcgcccgccg cgcctcgccg gggatgatcg cctcgatggt ggcgctctcg ttggcgagcg
     2221 cctggcgcag atccggcaga tagccctgct gaagtgaaaa ggtcacgtag accggcgcag
     2281 tctggatgat ggtggccaac ggcgagtcga cagcgcgcac gaagttaccc accttgaccg
     2341 ctgccatgct ggcccgtccc gcaatcggcg cccggatggt gcagtagctg agcaggatgt
     2401 tcagattctc gagttgcgcc gtgttggaat cgaccgaggc tcgccagatg ttggtctgcg
     2461 tgcgcgcatt ttgcagcgtc accagcgtag tcgcactctt ggcgagaagc tcggtgtagc
     2521 gcgcgacgtc gcgttcggcc tgctcgagat tggcccttgc gccggcgagc aggccttcca
     2581 cctgcctgac ctgggcttcg atggcgcggc tgtcgagcgt gaacagcagg tcgccttgct
     2641 gcaccatggc
//
LOCUS       DATCWM010000344         2549 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_461476, whole genome shotgun sequence.
ACCESSION   DATCWM010000344 DATCWM010000000
VERSION     DATCWM010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2549
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_461476"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(17..1465)
                     /locus_tag="VIQ50_06590"
     CDS             complement(17..1465)
                     /locus_tag="VIQ50_06590"
                     /inference="COORDINATES: protein motif:HMM:NF016224.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcjX family protein"
                     /protein_id="HEY9360083.1"
                     /translation="MSSMVNWGWLPPIFAQASERLSAGLGELAGGATVWLAVTGLSRS
                     GKTVFLTSLIHNLLSCGHNPNRMPLLGVVGERRLVAATIEAARANRLPQFPYLDNIER
                     MAIADWPARTEGISQIGIEVRFAPAGALGKLLSEITGSPAALTIRIVDYPGEWLLDLP
                     LIALGYAQWSRATLRLLRKGLRAEIARDFLGLLAQHRPEEAASEEVAKQLHDRYCAYL
                     LEARDRHGLSFLQPGRFLCRGTLGEVPYLWFAPLDAAEGDDMFAPGTLGALMAERFDV
                     YKREVVERFYQDHFRHYSRQIVLVDVLRALLGGRDAFEDTRLALDAILESFRYGHGGI
                     LSRLLLGPHIDKVLFAATKADHVPDIQRDHLAALLRNMAAFPALEVKGSNAQLEVTAI
                     ASVISTAEESQEIEGQRVQVVVGRPLGSKKQSKFFVGNVPIRPPRADAWGSPFLNVPV
                     FEPPAIDPSPVDGIAHINLDLALEFLLGDRLR"
     gene            complement(1777..2517)
                     /locus_tag="VIQ50_06595"
                     /pseudo
     CDS             complement(1777..2517)
                     /locus_tag="VIQ50_06595"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
BASE COUNT          476 a          840 c          813 g          420 t
ORIGIN      
        1 ggctcgggtt gatcgctcat cgcagccggt ctccgagcag aaattcgagc gccaggtcga
       61 ggttgatgtg cgcgataccg tcgaccggcg aaggatcgat cgcgggcggc tcgaacacgg
      121 gcacgttgag gaaaggcgag ccccaggcgt ccgcgcgcgg cgggcggatg gggacattgc
      181 cgacgaaaaa cttcgactgc ttcttgctgc caaggggccg gccgaccacc acctgcacgc
      241 gctgtccctc gatctcctga ctctcttccg cggtcgagat caccgaggcg atcgccgtca
      301 cctccaattg cgcattgctg cctttgacct cgagcgccgg gaacgcggcc atgttgcgca
      361 acagtgcggc aaggtgatcg cgctggatgt cgggaacatg atcggccttg gtggcggcga
      421 acagcacctt gtcgatgtga ggaccgagca acagccggga gaggattccg ccgtgcccgt
      481 agcgaaagct ctccagaatg gcatcgagcg cgagccgcgt atcctcgaaa gcgtcgcggc
      541 cgccgagtaa cgcgcgcagc acgtcgacga gcacgatctg gcgcgaatag tgccggaaat
      601 gatcctgata gaagcgctct accacctccc gtttgtagac gtcgaagcgc tcggccatca
      661 gcgcgccaag cgtgccgggc gcgaacatgt cgtcgccttc ggcggcatcg agcggcgcaa
      721 accacagata cgggacctcg ccgagcgtcc cccggcacaa gaaccggccg ggctggagaa
      781 agctcaggcc atgccggtcg cgcgcctcga gaagataggc gcaatagcga tcgtgcagct
      841 gtttggcgac ctcctcgctc gcagcttcct cgggccggtg ctgggcgagg agacccagaa
      901 agtcgcgcgc gatctcggcg cgcaaaccct tgcgcagcaa acgcagcgtc gcgcgcgacc
      961 actgggcata gccgagcgcg atgagcggaa ggtcgagcag ccactcgcca ggataatcga
     1021 cgatgcggat ggtgagcgcc gcaggacttc cggtaatctc gctcaggagc ttgccgagcg
     1081 cgccggccgg cgcgaagcgc acttcgatac cgatctggct gatgccctcc gtgcgcgccg
     1141 gccagtccgc gatcgccatt cgctcgatgt tgtcgaggta ggggaattgc ggcaggcggt
     1201 tcgccctcgc cgcctcgatc gtggccgcga ccaagcgacg ctcgccgacg acgcccaaga
     1261 gcggcatgcg gttggggttg tgcccacagc tcaggagatt gtggatgagg ctcgtcagga
     1321 acacggtctt gcccgatcgg ctcaggccgg tcaccgcgag ccagaccgtc gctccgccgg
     1381 caagctcgcc gaggccggcc gacagccgtt cggacgcctg cgcaaagatc ggcggcagcc
     1441 aaccccagtt caccatggac gacatctcaa ttccgaccgc tcctgccgtc gttcccgcag
     1501 cgtggacccg cggtctctga atatgggttc ccgcccgcgc ggcggcgacg ggggtttgcc
     1561 aaaattcgcg gtcgcgcaaa ccgcttcccg catagacggc ggcgcccggc gcgtaggtcc
     1621 gcccaatgct tcaccgtgcg gtcgggcgtt acctagtgat cacgcaggct tgcgttggtg
     1681 aaccgagcct cgcgtcaggt tgagccgcaa aggccagcgc cggaatcggc catgcggctg
     1741 ccgtgctgcc gagcagggat atgaactcgc gccgtttcat tcgatcgttt cgtcggcgcg
     1801 acccagtatc gtctggggaa cggtgagacc gagagccttg gcagtcttga ggttgataat
     1861 gagttcgtac ttcgccggca ggatcaccgg caattcagcg ggcttctcac cctttaggat
     1921 gaggtcgacg tatccggcgg cattgcgata ctgctcggct actcgaggcc catacgagat
     1981 caagccgccg tcaaccacga agtagcgtgc gaagtacacc gcgggcaatt ggtgtcgggc
     2041 cgctaacatg atgatcaaat cgcgatgagc caccgccagg gtacttccag tcacgattag
     2101 cccgccattc ggggatcgcg ccaaggctac gatgcggcgc tcgatctcag ccgcgtcacg
     2161 catattgatc ggaattacct ccaccccaac cgagggcgcc atagcctgga tgacacccca
     2221 ttgaccgccc cctcagccga taactcgtcc cgaacgattg ccgcccgtgt cacgccaggc
     2281 gcaaatttcc ttgagcagct ccagccacct cccgctgatg ctatattcga acatggtgac
     2341 gccggtgata ttggcgcccg gtcggaccag gctctcgaca aagccgctgc cgacgggatc
     2401 aacgacgccg gcgaatacaa tcggcacggc gtgggtggcc tgctgcaacg ctgccacgct
     2461 ctgattgcca cctgcgagaa ggacgtccgg cgccgaagcg actaactccg ccgccagctg
     2521 gcgagtgcga tcagcatcgc ccccgcccc
//
LOCUS       DATCWM010000345         2349 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_83714, whole genome shotgun sequence.
ACCESSION   DATCWM010000345 DATCWM010000000
VERSION     DATCWM010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2349)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2349)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2349
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83714"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(74..517)
                     /locus_tag="VIQ50_06600"
     CDS             complement(74..517)
                     /locus_tag="VIQ50_06600"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEY9360084.1"
                     /translation="MADESLTRKTARELAAMIKARAVSPVEVLDAHLAVIARVNPKLN
                     AIVTLAAEQAKEQARAVEAAVMRGERLGALAGLPVAIKDVTPTAGIRTTFGSPLYKDH
                     IPAEDAEAVSRLKAAGAIVLGKTNTPEFATGANTVNALFGATRNP"
     gene            complement(526..1281)
                     /locus_tag="VIQ50_06605"
     CDS             complement(526..1281)
                     /locus_tag="VIQ50_06605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY9360085.1"
                     /translation="MRRFDPYLPIIGVVGLIVVWYLAVWYQVVDRVLLPSPIDTFRAL
                     WNGMTGGRLGFDFMRTLERTILATLIAAAIALPLGILLGASEKVYRSVEFVVDFFRST
                     PASAMFPLFLVLFGVGDKTKISVAAFGATLVILFNVAYGVMHARKTRLLAAKVMGASR
                     IRVLTDVMLLESLPQTFVGLRNGVSLALVIVVVAEMFIGSTDGLGQRVFEAQQLFAMP
                     DMYAAIFAAGGLGYGLNLLFLLVERQFVHWSGK"
     gene            complement(1278..2090)
                     /locus_tag="VIQ50_06610"
     CDS             complement(1278..2090)
                     /locus_tag="VIQ50_06610"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9360086.1"
                     /translation="MGRESSAVRADEAAAASAASAHVTIRGLTKRFTDAVVYDRFDLD
                     IPRGKLVSVFGPNGCGKSTLINMIAGLIPTDAGEILFDGKPLRDIKFGYVFQNYREAL
                     FPWLRAIDNIQYPLKLMKLPKAERRARTERMVASLGVKIDLNRYPYELSGGQQQLVSI
                     MRALVVEPQILFLDEPFSALDYEMTLFMRDQLQRIFVETGTTTVLVSHDLEEAVYLAD
                     RILLLSRRPACVADYVHYDAARPRTDATLSQHDFVRIKAHCLDVFQREVRKG"
     gene            complement(2103..>2349)
                     /locus_tag="VIQ50_06615"
     CDS             complement(2103..>2349)
                     /locus_tag="VIQ50_06615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360087.1"
                     /translation="TAAWGKAVELINSNPQEARKHLLKNTFTPDDVVDTVPMIRYFMA
                     KDLTAKDKADYQKFIDFSVQTGTLSEKVDVSKYLQAF"
BASE COUNT          436 a          740 c          765 g          408 t
ORIGIN      
        1 cgatcgggac catgccggtc gcgaccgcca ccgccgatcc tccggatgag ccggccgggc
       61 tgagcgcgca atttcatgga ttgcgcgtcg cgccgaagag cgcgttcacc gtgttcgcgc
      121 cggtcgcgaa ttccggcgta ttggtcttgc ccagcacgat cgctccggcg gctttgaggc
      181 ggctgaccgc ttcggcatcc tctgcgggga tgtgatcctt gtagagcggc gagccgaacg
      241 tggtgcggat gccggccgtc ggcgtgacgt ccttgatcgc gacgggaagc ccggcaagcg
      301 ctccgaggcg ctccccgcgc atgaccgcgg cctcgacggc gcgagcttgc tcttttgcct
      361 gctcggccgc gagcgtcacg atggcgttga gcttggggtt cacgcgcgcg atcaccgcca
      421 gatgcgcgtc caaaacctcg accgggctca ccgcgcgcgc cttgatcatg gcggcgagtt
      481 cgcgcgcggt ctttcgcgtc aaactctcat cggccatcga atccgtcact tccctgacca
      541 gtggacgaac tggcgctcga ccagcagaaa caggagattg agtccgtagc ccaggccgcc
      601 ggccgcgaag atcgccgcgt acatgtcggg catggcgaac aattgctgcg cctcgaacac
      661 gcgctgcccg aggccgtcgg tcgagccgat gaacatctcg gccacgacca cgatcacgag
      721 cgccagggag acgccattgc gcaatccgac gaaggtctgc ggcaacgatt cgagcagcat
      781 gacgtcggtg agcacccgga ttcgcgacgc gcccatcacc ttggcggcca agagccgtgt
      841 cttgcgcgcg tgcatgaccc cataggcgac gttgaacagg atgaccagcg tcgccccgaa
      901 tgcggcgacc gaaatcttgg tcttgtcgcc gaccccgaac agcaccagga acagcgggaa
      961 catggcggaa gccggggtgg aacggaagaa atcgaccacg aactcgacgg agcggtaaac
     1021 cttctcggac gcgcccagga gaatgccgag tggaagcgca atcgcagccg cgatcagcgt
     1081 tgcgaggatc gtgcgctcca gcgtccgcat gaaatcgaag ccgagccggc caccggtcat
     1141 cccgttccac agcgcacgaa acgtgtcgat tggcgacggc agcagcacgc gatccacgac
     1201 ctgataccac accgccagat accagacgac gatcagcccg accacgccga tgatcggaag
     1261 gtagggatcg aagcgcctca tcccttgcgc acctcccgct ggaatacatc gaggcagtgc
     1321 gccttgatgc ggacgaagtc gtgctgcgac agcgtggcgt cggtgcgcgg ccgcgcggcg
     1381 tcgtaatgca cgtagtccgc aacgcatgcc ggacggcgcg agagcaggag aatgcggtcg
     1441 gcgagataaa ccgcctcctc gaggtcatgg gagacaagca ccgtcgtcgt gcccgtttcc
     1501 acgaagatgc gctgaagctg gtcgcgcatg aacagcgtca tctcgtagtc gagcgccgag
     1561 aacggctcgt cgagaaagag gatttgcggt tccaccacga gcgcgcgcat gatcgagacc
     1621 agctgctgct ggccgcccga cagctcgtag gggtagcggt tgaggtcgat cttgacgccg
     1681 aggctggcga ccatccgctc cgtgcgcgcg cgccgttcgg ccttcggcag cttcatcagc
     1741 ttgagtggat attggatgtt gtcgatcgcg cgcagccagg ggaacagcgc ctcgcgatag
     1801 ttctggaata cgtagccgaa cttgatgtcg cgaaggggct tgccgtcgaa caagatttcc
     1861 ccggcgtcgg tggggatcaa gccggcgatc atgttgatca gcgtgctctt gccgcagccg
     1921 ttcggtccga ataccgatac gagctttccg cgcgggatat cgaggtcgaa gcggtcgtag
     1981 acgacggcgt cggtgaaacg cttggtcaag ccgcggatgg tgacgtgggc ggatgccgca
     2041 gacgcggcag ccgcctcgtc cgctcgcacc gccgaactct cccgccccac ggcaatcgat
     2101 cctcagaacg cttgcagata tttgctcacg tccaccttct cgctgagcgt gccggtttgc
     2161 accgagaagt cgatgaattt ctggtagtcc gccttgtcct tggccgtgag atccttggcc
     2221 atgaagtatc ggatcatggg aaccgtatcg acgacgtcgt cgggcgtgaa cgtgttcttg
     2281 agcaggtgct tgcgtgcctc ttgcggattg gagttgatga gttcgaccgc cttgccccag
     2341 gcggccgtg
//
LOCUS       DATCWM010000346         3479 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_191314, whole genome shotgun sequence.
ACCESSION   DATCWM010000346 DATCWM010000000
VERSION     DATCWM010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3479)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3479)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3479
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191314"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1309)
                     /locus_tag="VIQ50_06620"
     CDS             complement(<1..1309)
                     /locus_tag="VIQ50_06620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HEY9360088.1"
                     /translation="MAVSSVPQERPSSAPDYPETGWRRSRSTPSLSEVFGSISTRPRG
                     PLWKKLLAFLGPGYLVAVGYMDPGNWATSLAGGSKFGYALLVVALLSNMMAILLQALC
                     ARLGIAAGRDLAQACRDAFPRAMSWPLWLLAEIAICATDLAEVIGTAIGLNLLFKIPL
                     EIGVIITAFDVFLILGMQHLGFRWIESFVVALLGVIAACFAVQIALANPNWRSVILGF
                     APTTEIVTNPEMLYLAIGIIGATVMPHNLYLHSGVVQTRRFGNTVEDKREAIKLATLD
                     STIALMFALLINASILILAAATFNKAGKTDVAELDQAHAFLAPLLGSAIAPTLFGIAL
                     LCCGMNSTVTATLSGQIVMEGFLDIRLPAWARRLATRALAIVPAAIVTIWYGEGGTAK
                     LLILSQVVLGLALPFSVVPLVMLTADRRKLHALVAPRWVTALAV"
     gene            1468..>3479
                     /locus_tag="VIQ50_06625"
     CDS             1468..>3479
                     /locus_tag="VIQ50_06625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEY9360089.1"
                     /translation="MNRSLLNSSAARQSARAGVCAIAALVLGTNIACAAEGGQSGSSE
                     GVFLAQLVTLMVVGRLLGEAMNRIGQPSVMGMLLGGIMLGPSVLGALWPELQHALFPR
                     TPEQKAMLDGISQFGILLLLLLTGMETDLKLVRTVGRAALSISATGVAVPFICGFTLG
                     QLLPEWLLPHSDGRLLTSLFLGTALSISSIKIVAAIVREMGFTRRNLGQIIVASAICE
                     DSIGWVIIAVIFSLAQAGTIDLVSVSKSVLGTAVFLAASFTVGRRIVYFLIQWTNDHF
                     QSDFPVITTILVIMGAMALTTHFIGVHTVLGAFVSGVLIGESPILSKHIDEQLRGLIL
                     AFFMPVFFGIAGLAADLTVLKQPALLLMTLGVIAIASFGKFAGAFLGGEIGGMTRREA
                     FALACGMNARGSTEVIIATIGLSMGALTQDLFTMIVTMAVVTTMAMPPMLRWALSRVP
                     MRKAEKERLEREEFEARGFVSNLERLLVAVDESPNGKFVASLAGLLAGTCRIPITVLP
                     LAAETKPGQPDAKSPGDRVEEMVKTAAGEIKPGQRRDEDAAPVDVTVRRHDAPTEEAV
                     AQEARKGYDLLFVGVENTRAKNGAFHADVSRIAAAFAGPLAIVAGNGDPLDKAKAIPG
                     RILVPVTGSEVSRRAAEVAIAIAGACERPITALYVSTPGVDDRRSRG"
BASE COUNT          645 a         1103 c         1116 g          615 t
ORIGIN      
        1 gtacggcgag cgcggtgacc catcgcgggg cgaccagcgc gtgcagcttg cggcggtcgg
       61 ccgtgagcat caccagcggc acgacggaga acggcaaggc aagccccaat accacctggc
      121 tcaagatcag gagctttgcc gtcccgccct cgccgtacca gatcgtgacg atggcggcgg
      181 ggacgatggc aagcgcgcgc gtcgccagcc gccgcgccca cgccggcaag cggatgtcga
      241 ggaagccctc catcacgatt tggccggaca acgtcgcggt caccgtcgaa ttcatcccgc
      301 agcacagcaa tgcgattccg aacagcgtcg gagcgatcgc cgagcccagc aacggcgcca
      361 ggaatgcgtg cgcctggtcg agctcggcaa cgtccgtctt gcccgccttg ttgaaggtgg
      421 cggccgccaa gatcaggatc gacgcgttga tcaacaatgc gaacatcaac gcgatagtcg
      481 aatcgagcgt ggcgagcttg atcgcttcgc gtttgtcctc gaccgtgttg ccgaagcggc
      541 gcgtttgcac gacgccggaa tgcagataaa ggttgtgcgg catcactgtc gctccgatga
      601 tgccgatggc gaggtagagc atttcggggt tggtgacgat ttcggtcgtc ggcgcaaaac
      661 cgaggatcac gcttcgccag ttggggttgg cgagcgcaat ctgcacggca aagcaggcgg
      721 cgatgacgcc gagcaaggcc accacgaagg actcgatcca gcggaagccc agatgttgca
      781 ttccgagaat gagaaacaca tcgaacgccg tgatgatgac gccgatttcc agcggaatct
      841 tgaacagaag attgaggccg atggcagtgc cgatcacttc ggcgaggtcg gtcgcgcaga
      901 tggcgatttc cgcgagcagc caaagcggcc acgacatcgc gcggggaaac gcgtcgcggc
      961 aggcctgcgc gagatcgcgc ccggcggcga tgccgagacg cgcgcacagc gcctgcagga
     1021 ggatcgccat catgttcgag aggagcgcaa caaccagcaa cgcgtagccg aacttggagc
     1081 cgccggcgag cgaggtcgcc caattgccgg gatccatgta gccgaccgcc accagatagc
     1141 ccgggccgag aaacgccaag agcttcttcc acaacggccc gcgtggccgc gtggagatgg
     1201 agccaaagac ttcggacagc gacggcgtgc tgcggctgcg acgccagccc gtttcggggt
     1261 aatccggagc ggatgatggg cgctcttgcg gcacggagga aacggccatg ctgacgatcc
     1321 tttcccacct ccataacctt gttgcaaata atttgcaatt gcatggcatt ccattccatc
     1381 cttggggcgg gtcaaatttc cgcgtagtgg ggctttctcc acaaggaaca atcgtccttc
     1441 gcccggatcg aggggcgagc tccctccatg aatcggtcgc tcctcaattc gtccgcggca
     1501 cgtcagagcg cccgcgccgg cgtctgcgca atcgctgcgc tggtgctcgg cacgaacatc
     1561 gcctgtgcgg ccgagggcgg ccaaagcggc tcttcggagg gcgtttttct cgcccagctc
     1621 gtcacgctga tggtcgtcgg gcgcctcctc ggcgaggcca tgaatcgcat aggtcagccc
     1681 tccgtcatgg gcatgctgct cggcggcatc atgcttggac cctcggtgct gggagcgctg
     1741 tggcccgagc tgcagcacgc tctctttcct cgcactcccg aacagaaagc gatgctcgac
     1801 ggcatttcgc agttcggcat tctgctgctg ctgttgctga ccgggatgga gaccgacctc
     1861 aagctcgtgc gaacggtcgg cagagccgcg ctgagcatct cggccaccgg cgtcgcggtt
     1921 cccttcattt gcggattcac gctcggccag ctgctgccgg aatggctcct gccgcattcc
     1981 gatgggcgtc tactcacctc gctgtttctt ggcaccgcgt tgtcgatctc ctcgatcaag
     2041 atcgtcgcag cgatcgtgcg ggaaatgggt ttcacccgcc gcaatctagg acagatcatc
     2101 gtcgcctcgg cgatctgcga ggactcgatc ggctgggtga tcatcgccgt cattttcagc
     2161 ctcgctcaag caggcacgat cgacctcgtg agtgtcagca agagcgtgtt ggggaccgcc
     2221 gtcttcctcg ccgcaagctt caccgtcgga cgccggatcg tctatttcct catccagtgg
     2281 acgaacgacc atttccagag cgacttcccc gtgatcacga ccatcctcgt gatcatgggc
     2341 gcgatggcgt tgacgacgca tttcatcggc gtgcacacgg tgctgggggc tttcgtctcg
     2401 ggcgtgctga tcggagaatc gccgatcctc agcaagcaca tcgacgagca gctgcgcgga
     2461 ctgatcctgg cgttcttcat gccggtgttc ttcggcatag ccggactggc tgccgatctc
     2521 accgtgctga agcagcccgc ccttttgctc atgaccctcg gcgtgatcgc gattgcgagc
     2581 ttcggcaaat tcgccggggc gttcctgggc ggcgaaatcg gcggaatgac gcggcgcgag
     2641 gcgttcgcgc tcgcttgcgg catgaacgca cgcggctcga ccgaggtgat catcgccacg
     2701 atcggattgt ccatgggcgc gctgacccaa gacctcttca ccatgattgt gaccatggcc
     2761 gttgtcacca ccatggcgat gccgccgatg ctgcgctggg ccttatcacg cgtgccgatg
     2821 cgcaaagcgg agaaagagcg gctggaacgc gaagagttcg aagctcgcgg cttcgtctct
     2881 aatctcgaac gcctgctggt ggccgtggac gagagtccga atggcaagtt cgtggcgtcc
     2941 ctcgcaggac ttttggccgg cacctgccgg attccgatca cggttctgcc ccttgcggcg
     3001 gaaactaagc ccggccaacc cgatgcgaag agccctggag atcgcgtcga ggaaatggtc
     3061 aaaaccgccg ccggcgaaat caagccaggg caacggcgag acgaggacgc cgccccggtc
     3121 gacgttacgg ttcgccgcca tgacgctccg accgaagagg cggtcgcgca agaggcaaga
     3181 aagggatacg acctgctatt cgtgggggtc gagaacacgc gcgccaagaa cggcgccttt
     3241 catgcggacg tcagccggat cgccgcggca ttcgcggggc cgctggcaat cgtcgccggg
     3301 aacggcgatc ctctcgataa agcgaaggca attccgggcc gcatcctggt tccggtgacc
     3361 ggaagcgagg tgtcgcgccg cgccgccgaa gtcgccatcg ccatcgccgg tgcctgcgag
     3421 cgcccgatca cggcactcta cgtcagcacg cccggcgtcg acgaccggcg cagtcgcgg
//
LOCUS       DATCWM010000347         2479 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_305044, whole genome shotgun sequence.
ACCESSION   DATCWM010000347 DATCWM010000000
VERSION     DATCWM010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2479)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2479)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2479
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_305044"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..562)
                     /locus_tag="VIQ50_06630"
     CDS             complement(<1..562)
                     /locus_tag="VIQ50_06630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit alpha"
                     /protein_id="HEY9360090.1"
                     /translation="MRIAVTRETDANESRVAATPETVKKMKALGAEIAVEPDAGTKSG
                     IPDPEFAAAGATVTADAVKDADVVLKVRRPAPSELARYKKGALVIAMMDPYGEDAALK
                     TMADAGVVAFAMELLPRITRAQVMDVLSSQANLAGYRAVIDAAAEYGRALPMMMTAAG
                     TVPAAKVFVMGAGVAGLQAIATARRLG"
     gene            complement(605..898)
                     /locus_tag="VIQ50_06635"
     CDS             complement(605..898)
                     /locus_tag="VIQ50_06635"
                     /inference="COORDINATES: protein motif:HMM:NF019452.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aa3-type cytochrome c oxidase subunit IV"
                     /protein_id="HEY9360091.1"
                     /translation="MADHGEVEYATAEGNDLPAHVAMYDRFVHWIVVGGAHVANIVLG
                     LAIGAVTGHWLVAFAIFVVATIVAFHGFLSGARTPSMVMGIVSLIALALTSGG"
     gene            complement(1036..2406)
                     /locus_tag="VIQ50_06640"
     CDS             complement(1036..2406)
                     /locus_tag="VIQ50_06640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AarF/UbiB family protein"
                     /protein_id="HEY9360092.1"
                     /translation="MTDREANRFSARAARYARVGANMSGVAARIAGARLFGLALDRGK
                     NAIELAAALGGLKGPIMKVAQLMATIPDALPPEYAAELMKLQSEAPPMGWAFVKRRMA
                     AELGPDWQKKLAQFEHHPAAAASLGQVHRARAHDDTQLACKLQYPDMQSAVEADLRQL
                     QLIFAIHRRMDPVIDTTEIAKEIGARIREELDYRREAKHVMLYRKMLDGIDAIHVPRV
                     RPELSTGRLLTLDWLQGRRLLEHTKADLATRNRLGIAMFTAWWWPFSRFGVIHGDPHL
                     GNYSVFDAAGRPVGINLLDYGCIRIFAPRFVGGVVDLYHGLLKADADLIVHAYETWGF
                     KRLNRELIDALNIWARFIYGPLLDDRVRSLADGIKPSEYGRREAFRVHQALKQRGPVT
                     VPREFVFMDRAAIGLGAVFLHLRAELNFYRLFNEAIEDFAIRRVGDRQAAALAAVGLD
                     KAASER"
BASE COUNT          417 a          816 c          830 g          416 t
ORIGIN      
        1 cgccgagccg gcgtgcggtc gcgatcgctt gtaggccggc aacgcccgcg cccatgacga
       61 acaccttcgc cgccggcacc gtgccggccg cggtcatcat catcggcaat gcgcggccat
      121 attcggccgc tgcgtcgatc accgcccggt agcccgcgag attggcctgg ctggagagca
      181 cgtccatgac ctgggcacga gtaatgcgcg gcaacaactc catggcgaag gcgacgacgc
      241 cggcatcggc catggtcttg agcgcggcgt cctcgccata aggatccatc atggcgatga
      301 cgagcgcgcc cttcttgtaa cgggcaagct ccgagggcgc cggccggcgc accttgagaa
      361 cgacgtcggc atccttgacg gcgtcggccg tcacggttgc gccggcggcg gcgaactcgg
      421 ggtcgggaat gccggatttc gttccggcgt ccggctcgac ggcgatctcg gcgccgagcg
      481 ctttcatctt cttgaccgtt tccggcgtcg ccgcgacccg gctttcgttc gcgtcggtct
      541 cgcgcgttac ggcaatgcgc attcacccgc ctcctcgtgg agcggaacgc ccgtcgagcc
      601 ccgttcagcc gccagaggtg agcgcgagcg cgatcagcga aacgatcccc atgaccatgc
      661 tgggcgttcg cgccccgctc agaaagccgt ggaaggcaac gatggtcgcg accacgaaaa
      721 tggcgaacgc aaccagccaa tgcccggtaa ccgccccgat cgccagtccg aggacgatgt
      781 tggcgacgtg ggcgccgccg accacaatcc aatgcacgaa acggtcgtac atcgccacgt
      841 gcgccgggag atcattgccc tcggccgtcg cgtactcgac ctcgccgtgg tcggccattt
      901 gcctcctcca cgcttgcacg ttcctgttcg gcaggcgggg attagcgcaa ttgtctctgg
      961 agggcaacgg cgccatcgag ccggcgacga ggtcgctacg gcggcatcat cggggggcgc
     1021 gcagatggcc ccgcttcacc gctcggaggc cgccttgtcg agaccgaccg ccgcgagcgc
     1081 cgcggcctgg cgatcgccga cgcggcggat tgcaaagtcc tcgatggctt cattgaacaa
     1141 tcggtagaag ttgagctcgg cgcgcagatg cagaaacacg gcgccaagcc cgatcgccgc
     1201 gcggtccatg aatacgaatt cgcgcggcac cgtcacggga ccgcgctgct tgagcgcctg
     1261 atgcacgcga aacgcctcgc gccgcccgta ttccgacggt ttgatgccgt cggcgaggct
     1321 gcgcacccgg tcgtccagca acggaccgta gatgaagcgc gcccagatat tcaatgcgtc
     1381 gatcaattcc cgattgagcc gcttgaaacc ccaggtctcg taggcgtgaa cgatgagatc
     1441 ggcgtctgcc ttgagcaggc cgtgataaag atcgaccacc ccaccgacga atctcggcgc
     1501 gaagatgcgg atgcatccgt agtccaagag attgatgccc accggccgcc cggccgcgtc
     1561 gaacacgctg taattgccga gatgcgggtc gccgtggatc acaccgaaac ggctgaacgg
     1621 ccaccaccac gccgtgaaca tggcgatgcc gagccgattc cgggtggcga ggtcggcctt
     1681 ggtgtgctcg agcaggcgcc ggccttgcag ccagtcgaga gtgagaaggc ggccagtcga
     1741 aagctccggc cgcacgcgcg gcacgtggat cgcatcgatg ccgtcgagca tcttgcggta
     1801 gagcatcacg tgcttggctt cgcgtcggta gtcgagctcc tcgcggatgc gcgcgccgat
     1861 ctccttggcg atttcggtgg tgtcgatgac cggatccatg cgccggtgaa tggcgaagat
     1921 gagctggagc tggcgaagat cggcctcgac cgccgactgc atgtccggat attgcagctt
     1981 gcaggcaagt tgcgtgtcat cgtgggcgcg ggcgcgatgc acttgtccga gcgaagcggc
     2041 ggcggcggga tggtgctcga actgggccaa tttcttctgc caatcggggc cgagctcggc
     2101 ggccatgcgc cgcttgacga aggcccagcc catcggcggc gcctcgcttt gcagcttcat
     2161 cagctcggcg gcgtattccg gcggcagcgc atcggggatg gtggccatga gttgggccac
     2221 cttcatgatc ggccctttga ggccgccgag cgccgccgcg agctcgatgg cgttcttgcc
     2281 gcggtcgagc gcgagcccga acagccgcgc cccggcgatg cgtgctgcga ccccgctcat
     2341 gttggcgccg acgcgcgcat agcgggcggc gcgggcagag aaacggttgg cttcgcggtc
     2401 ggtcatggtc tggctcgatt gatactgcct ctagatggcg cgtttacgcc cgatggccag
     2461 atgcctcgca cgaacaagt
//
LOCUS       DATCWM010000348         3693 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_132027, whole genome shotgun sequence.
ACCESSION   DATCWM010000348 DATCWM010000000
VERSION     DATCWM010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3693
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132027"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(75..1043)
                     /locus_tag="VIQ50_06645"
     CDS             complement(75..1043)
                     /locus_tag="VIQ50_06645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HEY9360093.1"
                     /translation="MKTILLRVALLAAALAFYAAPARAAEPDWPDQLRIGTASPGGTY
                     YVYGEALAKILTRTLDLPVQRLATEGPVQNIELMEAGEAKLGFVTIGVALQAWNGTGV
                     WAGKKPARSMRVIFPMYDTPFQFLVLQESGIRSVSEMSGKRIGVGPAGGTAAAYFPEF
                     FRLLNVPVSLAYGEWAQLAAQVHERKLDVLAGAAGVPFPSFIELEAKDKVRYVAFTAN
                     EIAALRLAMPELTPSRIPAGTYPSLLRSYQTLGLFNFAIAHAQLPDDLVYHVVRAVFE
                     NHEEMMEANAAAAETIPANIERNSFLPLHPGAIRYYRRIGRAGQTD"
     gene            complement(1071..2385)
                     /locus_tag="VIQ50_06650"
                     /pseudo
     CDS             complement(1071..2385)
                     /locus_tag="VIQ50_06650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333328.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006835 - dicarboxylic acid transport
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate/amino acid:cation symporter"
     gene            complement(2685..>3693)
                     /locus_tag="VIQ50_06655"
     CDS             complement(2685..>3693)
                     /locus_tag="VIQ50_06655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360094.1"
                     /translation="EISSGETPRTFVEIAEARAYLVETASPGYTMTLQGPEVAIGRLH
                     PEFAVRLENAIREARSAGLPSASVFSAYRPPAFGVGGFSNKFNSLHTYGLAVDMRGIG
                     TPGSSEAELWHRIAAKNGVVCPYGPRDRAEWNHCQPTSVKMIVAQNPLRETVSSAGPY
                     DLENMFEAGNAMIADVASAADSLSRAAATPVHVLEASAKSVEPTVRVAAPPRTKRSAR
                     VALARVADKPKHNAKAARVAAKSASPGKTERVAAKSGGHAKTEQVATKSTERAKREHV
                     AANPAEQTTKSTRRAAKSAEHAKSERVAAKSAQDAKPTQRKGRSAGAEESHPKAKSKG
                     A"
BASE COUNT          630 a         1170 c         1199 g          694 t
ORIGIN      
        1 tgcgcgggca tgacgagacc cgcggtcgag cagcgttatt tcgagcacat gaattccgcg
       61 cctaccacgc cccgtcagtc ggtttgcccg gcgcgtccga tccgccggta gtagcggatc
      121 gcgccgggat gcagcggcag gaaggagttg cgctcgatgt tggcgggaat ggtttccgcc
      181 gcggcggcat tcgcctccat catctcctcg tggttctcga acaccgctcg taccacgtgg
      241 tagacgaggt cgtccggcag ctgcgcgtgc gcgatcgcga agttgaatag gccgagcgtc
      301 tggtaactcc gcagcagcga cggataggtg ccggcgggaa tgcgcgaggg cgtgagctcc
      361 ggcatcgcaa ggcgcagcgc ggcgatctcg ttggcggtga acgccacgta tctcaccttg
      421 tcctttgcct cgagctcgat gaacgaggga aacggcacgc ccgcagcccc ggcgagcacg
      481 tcgagcttgc gctcgtgaac ttgcgcggca agctgcgccc attcgccata agcgaggctt
      541 accggcacat tgagcaggcg gaagaactcg ggaaaatagg cggccgctgt tcctcccgcc
      601 gggccgacgc cgatgcgttt gcccgacatt tccgagaccg atcggatccc tgactcctgc
      661 aggacgagaa actggaacgg cgtgtcgtac atcgggaaga tgacgcgcat ggatcgcgcc
      721 ggctttttgc cggcccatac gccggtgccg ttccacgcct gaagtgctac tccaatggtg
      781 acgaagccga gcttggcctc gcctgcctcc atcagctcga tgttctgcac ggggccctcg
      841 gtcgctaacc gctggaccgg gagatcgaga gtgcgggtga gaatcttcgc cagcgcctcg
      901 ccatagacgt agtaggtgcc gccgggcgag gccgtgccaa tgcggagctg atccggccag
      961 tcgggctcgg cggcgcgcgc cggcgccgcg taaaaggcga gcgcggcggc aaggagcgca
     1021 accctcagca atatagtctt catgccttgc ctcccgccgt gccgaacgcg ctaggccatc
     1081 acccgctcgg gctcctcggc ctccagctcc gtctctttct tgaggtgctt ctgcatccgt
     1141 cgttcgtcaa gcgcgttttc ccatttcgag accacaatgg tagccacgcc gttgcccacc
     1201 aagttggtga gcgcgcgcgc ctcggacatg aagcgatcca ctccgaggat gagtgcgatg
     1261 ctggcaacgg ggatcgagcc gacgcttgaa agcgtggcgg cgagcacgat gaatccgctg
     1321 ccggtgacgc cggcggcgcc tttcgaggtc agcagcaata tgccgatgat gccgagctgc
     1381 tgcaacaacg tcagctcggt gttggtcgcc tgcgcgagga agatcgccgc catcgtgaga
     1441 tagatgcagg tgccgtcgag gttgaacgaa tacccggtcg gaatgaccag gccgaccacc
     1501 gattccttgc agccgagatt ctcgagcttg accagcatgc gcggcagcac cgattccgag
     1561 gacgaggtgc cgagcacgat cagcagctcc tccttgatgt acttgatgaa ccgccagatg
     1621 ctgaacccgg tgaaccaggc aattcctccg agcacgacga agacgaacag gaggcaggtc
     1681 aggtagaacg cggccatcag cttgccgagc gagagcaggg tgacaacgcc gtatttaccg
     1741 atcgtgaacg ccatggcgcc gaaagcgccg atcccgcatg ataataccga cgacgttgaa
     1801 caggccgtgc gatacggcgt taataagagc gatgacgggc ttgccgcgct cgcccatcat
     1861 gtgcagtccg aacgcgaaca ggatcgcaaa gaacagcacc tgcaggattt cgccttcggc
     1921 aaacgcgcca accaccgtgt tgggtatgat gtggaacagg aattcgacgg tgctttgctg
     1981 gcccgccttg gtggtgtaga cctggatcga tctggtatcg atcgccccca gatcgacgtt
     2041 catgccggcg ccgggctgca gaacgttgac cacgacaagt ccgacgatga gcgcgagcgt
     2101 ggtcgttact tcgaagtaga tcagggcctt cagccccacg cgtcccacct tcttcatgtc
     2161 ctccatgctg gcgatgccgt gcacgacggt gcagaagatg atgggcgcga tcatcatctt
     2221 gatgagcttg atgaagccgt caccgagcgg cttcatctgc tcgccgagac tgggatagaa
     2281 atggcccagc aggatgccga tagcgatcgc ggtcagtacc tggatgtaga ggtgggtata
     2341 gaacggcttg cgtggggccc ggcccctcgc tgtggtcgcc accatgacgt tctccctatc
     2401 ggatccgaca gtctcttctt gttcgccaag cgagggcgcg cgagggcgcg gacctgcgtg
     2461 gcggctcggc gatcatatcg tgagcgtggc gccttggcac gtccgccggc ggcaggcctg
     2521 cctgcgagcg ggagtttgat ttgaccgagc gcgagctcgc ctgccggcgt cggctatgcg
     2581 tgcccccgac cgagatcgag ccgggcgaag cggatccaat gtggaaaggg agcgcaccga
     2641 ccttcggcgc gctccctcat cggcagctca ttgtgagacc aaggctacgc gcccttggat
     2701 tttgccttcg ggtggctctc ctcggcgccg gcgctgcgtc ctttgcgctg ggtaggcttt
     2761 gcatcttgcg ccgatttggc cgcgacgcgc tcactcttcg cgtgctctgc cgacttggcg
     2821 gcgcggcgcg tgctcttcgt cgtttgctcc gccgggttgg cggcgacgtg ctcccgcttt
     2881 gcgcgctcag tcgatttcgt ggcgacctgc tccgtcttag catgacctcc ggatttcgcg
     2941 gccacccgct cggtctttcc cggcgatgcc gatttggcag caacgcgcgc cgccttggcg
     3001 ttgtgcttag gtttgtcggc cacgcgggcg agcgccacgc gcgcgcttcg cttcgtccgc
     3061 gggggcgcgg cgacgcgcac ggttggctca acactcttgg cggaggcttc caatacatgc
     3121 actggcgtgg ctgcggcccg cgacagcgaa tcggccgcgc ttgccacgtc cgcgatcatg
     3181 gcattgccgg cctcgaacat gttttcgagg tcgtagggcc ccgccgacga cacggtctcg
     3241 cgcaagggat tctgtgccac gatcattttc acgctcgtgg gctggcaatg attccattcc
     3301 gcccggtcgc gcgggccata gggacacacc accccatttt tggcggcgat ccggtgccat
     3361 agctccgctt cggacgatcc aggcgtgccg atgccgcgca tgtcgacggc cagcccatag
     3421 gtgtgcagcg aattgaattt gttggaaaag ccgccgacgc cgaatgccgg cggccggtag
     3481 gcggagaaca cgcttgcgga cggcagcccg gcgctgcgcg cctcgcggat cgcgttttcc
     3541 aggcggactg cgaattcggg atgcagccgg ccgatcgcta cctccggtcc ctgcagcgtc
     3601 atggtgtaac cggggctcgc ggtctcgacc aaataggcgc gcgcttccgc gatttcgacg
     3661 aacgtcctcg gcgtctcgcc gctcgatatc tcg
//
LOCUS       DATCWM010000349         2839 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_315770, whole genome shotgun sequence.
ACCESSION   DATCWM010000349 DATCWM010000000
VERSION     DATCWM010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2839
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_315770"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..325
                     /locus_tag="VIQ50_06660"
     CDS             <1..325
                     /locus_tag="VIQ50_06660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360095.1"
                     /translation="AGDATASRVVGKGEAAAAPSGRADDFSWPRGTRKAPPPDSDAAA
                     LAAPEPTPDDSAAKPAQPPSGPRTSTAESDPANAASEQKPAKRRPRRPNPNAQSPFVF
                     PNFFR"
     gene            770..1144
                     /locus_tag="VIQ50_06665"
     CDS             770..1144
                     /locus_tag="VIQ50_06665"
                     /inference="COORDINATES: protein motif:HMM:NF014373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HEY9360096.1"
                     /translation="MPSAFGLWGDSLDHLVHLLVAFVLALPIGWHRAREERGAGLRTF
                     PLVAIASCGLVQTAISVFGPNAVVNANIMQGVVTGIGFIGAGAIIRQGDATTGHATAA
                     SIGPSASWVLRSAMGITTLESF"
     gene            1789..>2839
                     /locus_tag="VIQ50_06670"
     CDS             1789..>2839
                     /locus_tag="VIQ50_06670"
                     /inference="COORDINATES: protein motif:HMM:NF021633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OpgC domain-containing protein"
                     /protein_id="HEY9360097.1"
                     /translation="MAAPTKRIDGIDFWRGFALLMIFIDHVPENIFQHVTQQNFGFSD
                     AAELFVFLSGVSVALAYGTRFFDGETVGAVRALLRRAFTIYWVQILISLLIIAIFVGA
                     AALWHEEDLLEDADTVVSNPLQTTAAILALLHQLENANILPLYIVLLLVTPLLLALAR
                     RDDRLMLAASAGIYLAARAFSLNLSTWPVEGTWFFNPITWQLIFAIGIVAGRRLKRGG
                     IAYDAWLFAACLSIVAIAAVVRTDAFGFASGLWQNVRDVLDCGKTDLGFARLIHFLAL
                     VYIVYHSGLTGLMRRTRAFLPLCLIGRYGLPVFATGTVLSAMGEVVETHSEALSHQMA
                     FGIAIVVGGILVHYLV"
BASE COUNT          474 a          905 c          879 g          581 t
ORIGIN      
        1 cgccggcgac gcaaccgcct cgcgcgtggt gggcaaaggc gaggccgccg ctgcgccgag
       61 cggacgggcc gacgatttca gttggccgcg cggcacgcgc aaggctccgc cgcctgattc
      121 cgacgcggcg gccttggctg cgccggaacc gacgccggat gactccgcgg cgaagccggc
      181 ccagccgccc tccggaccgc gcacctcgac cgctgagtcc gatccggcga acgccgcctc
      241 cgagcagaag ccggccaagc gccggccgcg ccgccccaat cctaatgcgc aatcgccctt
      301 cgtctttccc aatttctttc gctgatttgt cgcagcgcac cttccccggc gcatcgcatt
      361 ggggccgaaa ccattcgtag cggcgctcgg ccagggtcaa tgatgaaacg cgctctgacc
      421 ggtatcgcaa gcgtgggtat tttggctgtg accgttgggg tggagacggc gaacgcgcag
      481 tcctatcgcc gctacggccc tacgcgaacc tatgccccgc agggctatcc atcccaaagc
      541 cgcggctcgg ttctccgcgg cgttccgcgc aatgctccgt tttccgaccc gaacagtccg
      601 gaagccaccg gcggtggtag catcggatac aatcgaggcc tcccgcacaa cgaatgagct
      661 tcgccgccac ccccgccgaa gcgagacgcc ccggatatgg cgcactgtca cattctggcg
      721 caccaggttt ccggcatgat gacccagctc accgtgtgat gagaagctga tgcctagcgc
      781 tttcggcctg tggggcgaca gtctcgacca tctcgtccat ttgctggtgg cattcgtcct
      841 tgcgctgccg atcggatggc atcgagcgcg cgaggaacga ggcgcaggtt tgcgcacctt
      901 cccccttgtt gccatagcga gttgcggctt ggtgcagacc gccatatccg tgttcggtcc
      961 caacgctgtc gtgaacgcaa atatcatgca gggcgtggtc accggcatcg gtttcatcgg
     1021 tgcgggcgca atcatcagac aaggtgacgc caccacgggt cacgcgaccg cggcaagcat
     1081 tggaccgtcg gcatcatggg tgctgcggtc ggctatgggt attacgacat tggaatcatt
     1141 ctgactgtgg cgaacctcgc ggtcctcatg ctgcgcatgc ggtcatgggg cggttgatca
     1201 gcgcgatgaa gcggcgcgag ttcatcaggc ttctcggcgg cgcggcggct tggccgctcg
     1261 ttgcgagcgc gcagacgccg cccggtttcg ctaccaccaa agtcgggcgg ccgacgagca
     1321 taagtgcctc gccgaagcca tgcgagacat caaacttccc aaatacgaga agtgggcgaa
     1381 ttacgacgcg tacctgccaa tgaacattga gcggtactgc gatttctata gtcttggaat
     1441 ttgagaccca cgcctgcggg atgccctctt gcggggccga gacgggtcga ttcgggcacc
     1501 agagtctgtt gccgttagga cacagctcaa cagaaaattc ctgtcagggt tccgtaggcg
     1561 agaagtcgcg gcatgagttt gaatgcccgc gctccgtcgg tttgatcagc aaattcagtg
     1621 cttttgtgct gctgcgtgcg tgtgtcggct ccagcggtga tggcgccaag ccgcagggcc
     1681 tttcgccaca aggccatggc acggcccgac gaccgtcgca ttttcaccat gggtcaggga
     1741 tgaatgactt gatcaggggc gatcgatgaa atcgggggcg aggggaacat ggcggctccg
     1801 accaagcgca tcgacggcat cgacttctgg cgcggctttg cgctgttgat gatattcatc
     1861 gaccacgtgc cggaaaacat ctttcagcac gtgacgcagc aaaacttcgg cttctcggat
     1921 gcggccgagc tgttcgtatt cctatccggc gtatccgtcg cgctcgccta cggcacgcgt
     1981 ttcttcgacg gagagacggt cggggcggta cgcgccctgc ttcgccgggc gttcacgatc
     2041 tactgggtgc agatcctgat ctcgttgctg atcatcgcca tcttcgttgg cgcggctgcc
     2101 ctgtggcacg aagaggatct cctggaagac gccgacacgg tggtgtctaa cccgctgcag
     2161 acgaccgccg ccattctggc gctcctccat cagctcgaga acgccaacat cttgccgctc
     2221 tatatcgtgc tgttgctggt gacgccgttg ctgctggcgc tggcgcgccg cgatgatcgg
     2281 ctgatgctcg cagcctcggc cgggatctat ctggcggcgc gcgcgttctc tctcaatttg
     2341 tcaacctggc ccgttgaggg aacctggttc ttcaatccca tcacgtggca actcatcttc
     2401 gccatcggca ttgtcgcagg acgccgactt aagcgcggcg gtatcgccta tgacgcgtgg
     2461 ctcttcgctg cttgcctctc tattgtcgcg atcgccgcgg tggtgcgcac cgatgccttc
     2521 ggctttgcat cggggctgtg gcagaacgtc cgcgacgtgc tcgactgcgg caagaccgat
     2581 ctcggattcg cgcggctcat acatttcctc gcgcttgttt acatcgtcta ccattccggg
     2641 ctcaccggac taatgcggcg gacccgggca ttcctgccgc tgtgcctgat cggccgctac
     2701 ggtttgccgg ttttcgcgac cggcaccgtc ctcagcgcca tgggcgaagt cgtggagacg
     2761 cactcagagg ctttgagcca ccagatggcg ttcgggatcg cgatcgtcgt cggtggcatc
     2821 cttgtgcatt atctcgttg
//
LOCUS       DATCWM010000350         6206 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_278180, whole genome shotgun sequence.
ACCESSION   DATCWM010000350 DATCWM010000000
VERSION     DATCWM010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6206
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_278180"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            55..2880
                     /gene="treY"
                     /locus_tag="VIQ50_06675"
     CDS             55..2880
                     /gene="treY"
                     /locus_tag="VIQ50_06675"
                     /EC_number="5.4.99.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008141010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047470 - (1,4)-alpha-D-glucan
                     1-alpha-D-glucosylmutase activity [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malto-oligosyltrehalose synthase"
                     /protein_id="HEY9360098.1"
                     /translation="MPPAIPLATYRLQLTPQFGFDQAAALVPYLKALGISHLYASPFL
                     KARSGSPHGYDVVDHNSLNPELGGEEGFRRLSAALDHADIGLILDFVPNHMGVHYADN
                     PWWLDVLEWGPKSPCAASFDIDWETLPAHPRGGVLIPVLGSPYGEALERGEIELRYDA
                     AEGSFSAWYFEHRLPIAPNRYGEIVQKAVAEAGAGEEPAGRKLLEWAERYRGPHNPPR
                     STAPAFKAELASIVGGKDVIERGLRAYRAGCGRADAAVALHYLLERQNYRLAHWRLAG
                     SEINYRRFFDINTLAGLCVEDRGTFDGIHALVRRLIAEGRLHGLRLDHIDGLRDPHQY
                     FRRLHRLIEVERRSKSGSFYVVAEKILSDGERLPRFAGVAGTTGYEWLNIISRLLLDN
                     RGLAVLERTWRDVRGEEPGFDAILIDAKRRVIANILNSEFTVLRRLLARIAAGHYSTR
                     DYTAERLRAAFGLFILHFPIYRTYITASGPSREDRTIIEDALAKARADWFGPDVDIFD
                     FLRDALTLDLVAPGRVGHSIARDRRFAFKVQQFTGPTMAKSVEDTAFYRFHRLLALNE
                     VGGNPAAGALSVANFHGRMQERATHWPHGLTATATHDTKRGEDARARLLTLSELADEW
                     TGNVRQWRELNAGLIVVSGRSRIPSPAHEYMLYQALLGAWPLAGIEAGFAERIKGFVI
                     KAAREGKQETSWLAPNERYENGLTEFVDRVLDRERSASFIDGFDAFARRVALMGALNS
                     LAQLALKATMPGVPDFYQGTEFWDLSLVDPDNRRSVDFAARASTLASIGQAPDWPALA
                     GAWPDGRIKLALTRSLLALRSDLADLFTNGAYRPLEVVGPNRREIVAFARVRERDAVI
                     VVTGRFFGRATQEGRRWPPSQAWNASVLAEGLSAIRTVLPAGKAMTGPRLPAADLFEV
                     LPIAVLHAQHTAVRGERTKVRVSAAAK"
     gene            complement(3141..4748)
                     /locus_tag="VIQ50_06680"
     CDS             complement(3141..4748)
                     /locus_tag="VIQ50_06680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HEY9360099.1"
                     /translation="MPDVPWWKSAVIYEIYPRSFQDTDADGVGDLRGIIARLPYLIDL
                     GVDAIWICPIFPSPMADFGYDVASYIDIDPLFGTLHDFDVLLTEAHRAGVKVLLDLVP
                     NHTSDRHPWFAKSRSSRDNAKRDWYLWRDGGPGGAEPNNWLSEFGGSAWEFDRRTGQY
                     YYHAFLKQQPDLNWRNPRVRQAIYEAMRFWLRRGVDGFRVDVLWHLIKDDRFRDNPAN
                     PVFVEGRPPHQALLPFYTTDRPEMAQLIAEMRDVVDEFGERLLIGEIYLPVERLVTYY
                     GRDLRGVYLPFNFSLLGAPWHAGTIGKLIQEYEAALPEGGWPNWVLGNHDRPRIAGRV
                     GRKQARIAAMLLLTLRGTPTIYFGDEIGMAQVSIPSDRVQDPFQKNLPGIEVGRDGSR
                     TPMQWDDTRYAGFSEVEPWLPLADDFREYNTVKQRSDPASIYHLYRQLIALRRSRSAL
                     LHGSYRLVHADGDLLLFFREQDPERLLVALNFGMGPAIAKFPDELAGTLLLSSHLDRQ
                     GEDLRGGIKLRPEEGAVIEIAGKASQQ"
     gene            complement(4905..5648)
                     /locus_tag="VIQ50_06685"
     CDS             complement(4905..5648)
                     /locus_tag="VIQ50_06685"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY9360100.1"
                     /translation="MIATRRAADTAIILIVLLLAWQALHQLVGATALPAPVPTLAYLA
                     KFVPSERFAENAWATLVCFFYALLLSYGIGLSIGVWMGIHRLSGAVGEPILISLYTLP
                     KVTLYPVVLLIFGLSLSGRVTFGAMHGVLPVALLTMSAIRNIPPVYLKSARTLHLSGW
                     QTILTVLFPATLPEMVAGLRIGFTLTLLGVLLAEMFAAKQGLGSLIINAMQLMQAEEM
                     LSVAVVLFAFAALANALLLWIEHRLHRRV"
     gene            complement(5645..>6206)
                     /locus_tag="VIQ50_06690"
     CDS             complement(5645..>6206)
                     /locus_tag="VIQ50_06690"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY9360101.1"
                     /translation="ALISVVAGFALGAVIHALPRVRQSLDPFFATYYAVPIFIFYPVM
                     IVIFGLSAIPIVLMGVATAIVAMIIATLNGLDRVPRVLAKVARVHRMGTIATALRLKL
                     PAAAPHLFTGVKLAVSYAFIGVIASEFILAPAGLGRVISDAYTDFNNRQMYALMLLLI
                     IVATVVNMLLYVVDQRWAERRGIAKP"
BASE COUNT         1159 a         1998 c         1983 g         1066 t
ORIGIN      
        1 gccggcacaa ctgctgcccg cgtggtccgt gttttggagc atgggagccg gatgatgcca
       61 cccgccattc cgctcgcaac ctaccggctc caactcaccc cgcagttcgg gttcgaccag
      121 gcggccgcgc tggtgcctta cctcaaggcg ctcggtatca gccatctcta cgcgtcacct
      181 ttcctcaagg cgcgctcggg cagcccgcac ggctatgacg tggtcgacca caattcgctc
      241 aaccccgaac tcggcggcga ggaggggttt cggcgactgt ccgctgcgct cgatcacgcg
      301 gatatcgggc tcattctcga tttcgtgccc aaccacatgg gcgttcatta tgcggataat
      361 ccgtggtggc tcgatgtttt ggagtgggga ccgaaatctc cctgcgctgc ctcattcgac
      421 atcgattggg aaacgctgcc ggcccatccg cgcgggggcg tgctcattcc ggtgctcgga
      481 agcccttacg gcgaggcgct ggagcgcggc gagatcgagc ttcgctacga cgccgccgag
      541 ggcagcttct ccgcctggta tttcgagcat cggctgccca tcgctccgaa ccgatacggc
      601 gagattgtgc aaaaggccgt ggcggaggcg ggtgcgggcg aggaacccgc gggccgcaag
      661 ctcttggaat gggccgagcg ctatcgcggt ccgcacaatc ccccgcgttc cacggcgccg
      721 gccttcaagg cggagctcgc ttcgatcgtc ggcggcaagg acgtgatcga acgcggcctg
      781 cgcgcctatc gcgccggttg cgggcgagcg gacgccgccg tcgcgctcca ttacctgctc
      841 gagcgccaga actatcgcct cgcgcattgg cggcttgccg gcagcgagat caattatcgg
      901 cgcttcttcg acatcaacac gctggccggg ctgtgcgtcg aagaccgcgg caccttcgac
      961 gggattcatg cgctcgtccg ccgcctcatc gccgaaggcc gcctgcatgg actgcgcctc
     1021 gatcacatcg atggactgcg tgacccgcat cagtatttcc gccggcttca ccggctgatc
     1081 gaggtcgaac ggcggtcaaa gagcggatcg ttctacgtgg tggcggaaaa gatcctgagc
     1141 gatggggagc gcctgccgcg ctttgccggc gtcgctggca ccacgggata cgaatggctc
     1201 aacatcatct cgcgcctcct gctcgacaac cgcggacttg ccgtgctcga aaggacttgg
     1261 cgcgacgtga ggggcgagga gcccggcttc gatgccattc tcatcgatgc caagcggcgg
     1321 gtgattgcaa acattctcaa cagcgaattc acggtgctga gacgcctgct cgcgcgcatc
     1381 gccgccggcc actacagcac gcgcgactac accgcagagc gcctgcgtgc agcgttcggg
     1441 ctgttcatcc tgcattttcc gatctaccgg acctacatca ctgcgtcggg gccgagccgc
     1501 gaggaccgca cgatcatcga ggacgcgctc gccaaggcgc gcgccgactg gttcggcccg
     1561 gacgtcgaca tcttcgattt cctgcgtgac gcgctgaccc tcgatctcgt cgctccgggt
     1621 cgcgtgggcc acagcatcgc tcgcgaccgc cgcttcgcgt tcaaggtgca gcaattcacc
     1681 ggtccgacga tggcaaagtc ggtggaggat accgcttttt atcgctttca ccggctgctc
     1741 gctctcaacg aggtcggcgg caatccggct gccggcgcgc tgtcggtcgc gaatttccac
     1801 ggccgcatgc aggagcgcgc cacgcattgg ccgcacggcc tgaccgcgac cgcgacccac
     1861 gacaccaaac gcggcgaaga cgcccgcgcg cggctgctca cgctttccga gctcgccgac
     1921 gagtggaccg gaaacgtgcg tcaatggcgg gagctcaatg ccggcctgat cgtcgtatcg
     1981 gggcgatcac ggataccctc gccggcgcac gaatatatgc tctatcaggc gctgctcggc
     2041 gcctggccgc tcgccggcat cgaggcgggt ttcgccgagc ggatcaaggg cttcgtcatc
     2101 aaagccgcgc gcgagggaaa gcaagagacg agctggctcg cgcccaacga acggtacgaa
     2161 aacggcctta ccgaatttgt cgatcgcgtt ctcgatcgcg aacgctcggc aagcttcatc
     2221 gacggtttcg atgcgttcgc gcgccgcgtg gctttgatgg gggcgctcaa cagccttgca
     2281 caattggcgc tgaaggcgac catgccgggc gtgccggatt tctatcaggg caccgaattc
     2341 tgggatctat cgctggtcga tcccgacaac cggcgatccg tcgacttcgc ggcgcgagcg
     2401 tccacgctgg catcgatcgg ccaggcgccg gattggcccg cgctcgccgg cgcatggccg
     2461 gacggccgga tcaagctcgc gctgacgcgc tcgcttctcg cgctgcggtc cgatcttgcg
     2521 gacctcttca ccaacggcgc ctatcgtccg ctcgaggtgg tcggtccgaa ccgacgcgag
     2581 atcgtcgcgt tcgcacgggt acgcgagcga gacgccgtca tcgtcgtgac cggacggttc
     2641 ttcggccgcg cgacgcaaga ggggcggcga tggccgccca gtcaagcctg gaatgcatcg
     2701 gtattggccg aaggcctctc cgcgatccgc accgtgctgc cggccggcaa ggcgatgacc
     2761 ggaccgaggc ttcccgccgc ggatttgttc gaggtcctgc cgatcgccgt cttgcacgca
     2821 cagcatacgg cggtcagggg cgagcgaacg aaagtcagag tcagcgccgc cgccaaatga
     2881 ccggctggca cgggacaaaa gaaagaggcc gtccggggtc ttgtcggccg aacggcctcg
     2941 cggacgtcgt gccgaccacc aagggtcggt tccctccctc cgccggaacg ctatctacgc
     3001 aaccggagtg attcgggcaa tcgccgattt cccgcttgaa accagacttt tggaactacg
     3061 agctggtcgt attggcccgt cgctccgcgg cctaaccagc agcggaatcc tcgatcagcc
     3121 accgggattc gactcggttt ttattgctgc gacgctttcc cggcgatctc gatcaccgct
     3181 ccttcctccg gccgcagctt tatgccgccg cggaggtcct cgccttggcg atcgagatgc
     3241 gacgacagca ggagcgttcc ggcaagctcg tcgggaaatt tcgcaatggc ggggcccatt
     3301 ccgaagttga gcgcaaccaa caagcgctct ggatcctgct cgcgaaagaa cagcaacaag
     3361 tcgccatccg catggaccag gcggtagctg ccgtggagga gggcgctccg cgatcgccgc
     3421 aatgcgatga gctggcgata gaggtgatag atcgaggccg gatcgctgcg ctgcttcacc
     3481 gtgttgtact ctcgaaaatc gtcggccagc ggcagccaag gctcgacctc ggagaagccg
     3541 gcatagcggg tgtcgtccca ttgcatgggg gtgcggctgc cgtcgcggcc cacctcgata
     3601 ccgggcaggt tcttttggaa cggatcctgg acgcggtccg acggtatcga cacttgcgcc
     3661 atgccgatct cgtcgccgaa atagatggtg ggcgttccgc gcaaggtgag caggagcatg
     3721 gcggcgatcc gcgcctgctt gcgtccaacg cggccggcga tgcgaggccg atcgtgattg
     3781 cccagcaccc aattgggcca cccgccctcg ggcagcgccg cctcgtattc ctggatcaat
     3841 ttgccgatcg tgccggcatg ccatggcgcg ccgagcaggg agaaattgaa cggtagatag
     3901 acgccgcgca ggtcgcgccc gtaatatgtc acgagccgtt cgaccggcag atagatttcg
     3961 ccgataagga gacgctcgcc gaattcgtcg accacgtcgc gcatctccgc gatcagctgg
     4021 gccatttccg ggcggtcggt ggtgtagaag ggaagcagcg cctggtgggg cgggcgcccc
     4081 tcgacgaaga ccggattggc cggattgtcc cggaaccggt cgtccttgat caggtgccac
     4141 aggacgtcga cgcggaaccc gtcgaccccg cgccgcagcc agaaccgcat cgcctcatag
     4201 attgcctgcc gcaccctcgg attgcgccag ttcagatccg gctgctgctt gagaaaggcg
     4261 tggtaatagt actgcccggt gcggcgatcg aattcccagg cgctgccgcc gaattctgat
     4321 agccaattgt tgggctcagc gccgccgggt ccgccgtcgc gccagagata ccagtcgcgt
     4381 ttggcgttgt cgcgggaact gcggctcttc gcaaaccacg gatggcggtc ggaggtgtgg
     4441 ttgggaacga gatcgagcaa caccttcacg ccggcgcgat gcgcctcggt gagcagcaca
     4501 tcgaagtcgt gcaacgtccc gaacagggga tcgatgtcga tgtagctggc gacgtcgtag
     4561 ccgaaatcgg ccatgggcga gggaaagatc gggcagatcc agatcgcatc gaccccgagg
     4621 tcgatcaggt aaggcaggcg cgcgatgatg ccgcgcagat cgccgacgcc atctgcatcc
     4681 gtatcttgga acgagcgcgg atagatttcg taaatgacgg cagacttcca ccacggcacg
     4741 tccggcatgc gtacaccttc gtcatccgac cagtctcaga atgccccttc gttatcgcgc
     4801 tgaatcgaag gagaacttgg aggggccgga ggttgcgata ccggctaaac gacgctaagt
     4861 cacgccgtga atgatcgatc gcgtgccatc gacctcggcg cgctctagac tctccgatgc
     4921 agtcggtgct cgatccacag cagcagcgca ttggcgagcg ccgcaaacgc aaacaacacc
     4981 accgcgacgg atagcatctc ctcggcctgc atcagttgca tggcgttgat gatcagagat
     5041 cccagcccct gcttggcggc gaacatctcc gccagaagca cgccgagcag cgtcaaggtg
     5101 aagccgatgc gcagtccggc gaccatctcg ggaagcgttg ccgggaaaag cacggtcagg
     5161 atcgtctgcc accccgacaa gtgcaacgtt cgcgccgatt tcaggtagac cggtggaata
     5221 ttgcggatcg cgctcatggt cagaagcgca accggcagca cgccgtgcat ggcgccgaac
     5281 gtcacccgcc ccgataggct cagcccgaag atcagcagca ccaccggata aagcgtgacc
     5341 ttcggcaacg tgtagagcga gatgaggatc ggctcgccga ccgcgcccga caggcgatga
     5401 attcccatcc acaccccgat cgaaagccca atcccgtacg acaagagcag cgcgtagaag
     5461 aaacacacga gggtggccca tgcgttttcg gcaaaacgct cgctcggcac gaacttagcg
     5521 aggtaggcga gcgtcgggac tggagcaggg agcgcggttg cgccgacgag ctgatgcagc
     5581 gcctgccatg ccagcagcag gacgatgagg atgatcgcgg tgtcggcggc gcgtcttgtt
     5641 gcgatcatgg ctttgcaatc ccgcgccgct ccgcccagcg ttgatcgaca acgtacagaa
     5701 gcatattaac tacggtcgcg acgatgatca gcagcagcat caacgcgtac atctggcgat
     5761 tgttgaagtc ggtataggcg tcggaaatga cccgacccag cccggccggc gcaaggatga
     5821 actcgctggc gatgacgccg atgaaagcgt agctgaccgc gagcttgacg ccggtgaaga
     5881 gatgcggcgc tgccgccggc aatttcaggc gcagcgccgt ggcgatcgtt cccatgcggt
     5941 gcacccgcgc caccttggcg agcacccgcg gcacgcggtc gagcccgttc aacgtcgcga
     6001 tgatcatcgc cacgatggcg gtcgccacgc ccatcagcac gatcggtatt gcggaaaggc
     6061 cgaagatcac gatcatgacc ggatagaaga tgaagatcgg gacggcgtaa taggttgcga
     6121 agaatggatc gagcgactgc cgcacgcgcg gcagcgcgtg aatgacggcg ccaagcgcaa
     6181 atcccgctac caccgagatc aacgcc
//
LOCUS       DATCWM010000351         4813 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_8007, whole genome shotgun sequence.
ACCESSION   DATCWM010000351 DATCWM010000000
VERSION     DATCWM010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4813
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8007"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(88..867)
                     /locus_tag="VIQ50_06695"
     CDS             complement(88..867)
                     /locus_tag="VIQ50_06695"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008138003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008177 - succinate dehydrogenase
                     (ubiquinone) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HEY9360102.1"
                     /translation="MVQFTLPKNSKVTDGTTWTAPAGAHDLREYRIYRWNPDDGKNPR
                     IDTYYVDCGDCGPMVLDALIWIKNNIDPTLTFRRSCREGICGSCSMNIDGTNTLACTK
                     AMADIKSTVKIYPLPHMPVVKDLVPDLSNFYAQHAAIEPWLQTTTPTPQKEWRQSHED
                     RQKLDGLYECILCACCSTACPSYWWNSERFLGPAALLQAHRWHKDSRDEATGRRLDTL
                     EDPFRLYRCHTIMNCAKACPKSLNPAKAIAEIRRMMVERQV"
     gene            complement(889..2715)
                     /gene="sdhA"
                     /locus_tag="VIQ50_06700"
     CDS             complement(889..2715)
                     /gene="sdhA"
                     /locus_tag="VIQ50_06700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HEY9360103.1"
                     /translation="MNGGSNGKGPAVNGRAYPIEDHDYDVVVVGAGGSGLRAVVGCSE
                     AGLKTACITKVFPTRSHTVAAQGGIAAALGNMGEDDWRWHMYDTVKGADWLGDQDAIE
                     YMCRSAPQAVYELEHWGLPFSRREDGKIYQRPFGGMTTHYGKGIAQRTCAAADRTGHA
                     MLHTMYGQALRHAAEFFIEFFAIDLIIDDEGRCRGVVVIKLDDGSIHRFSAHMTILAT
                     GGYGRAYFSCTSAHTCTGDGNAMVLRAGLPLQDMEFVQFHPTGIYGAGCLITEGARGE
                     GAYLVNSEGERFMERYAPSAKDLASRDVVSRAMTIEIREGRGVGKHKDHIYLHLDHLD
                     PEVLHERLPGISESARIFAGVDVTCDPIPIVPTVHYNMGGIPTNYHGEALTKKNGNDD
                     FVVPGLMSLGEAACVSVHGANRLGSNSLIDLVVFGRAAASRCAEVLRPGESHPDLPKD
                     SAERALARLDKFRHAAGTTPTAQLRLKMQKVMQNNCAVFRTAEVLEEGEKLIHEVYGG
                     VADIKVTDRSLIWNSDLIETLEFDNLIAQAVVTMESAKNRTESRGAHAREDFPERDDK
                     NWMKHTLAWLDANGKVTIDYRPVHAYTLTNEMAYIEPRKRVY"
     gene            complement(2725..3114)
                     /gene="sdhD"
                     /locus_tag="VIQ50_06705"
     CDS             complement(2725..3114)
                     /gene="sdhD"
                     /locus_tag="VIQ50_06705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013528875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045282 - plasma membrane succinate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, hydrophobic membrane
                     anchor protein"
                     /protein_id="HEY9360104.1"
                     /translation="MAFRDMSTPLKHVRGLGPAKSGTEHFWRQRLTAIANVPLTISFV
                     FVVVALLGRNHAAVVQILGSPLIAIIMLLFIISVTTHMRIGMQVIIEDYVHDEARKFI
                     LVIANTFFAVAVGLSSAFAILMLSFKV"
     gene            complement(3114..3524)
                     /gene="sdhC"
                     /locus_tag="VIQ50_06710"
     CDS             complement(3114..3524)
                     /gene="sdhC"
                     /locus_tag="VIQ50_06710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009466594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045282 - plasma membrane succinate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, cytochrome b556
                     subunit"
                     /protein_id="HEY9360105.1"
                     /translation="MADAKAPAERPLSPHLFIYKPMLTMMMSIVHRITGGALYFGTLL
                     VAWWLIAAASGPKSYAGIGSFINSLFGRVILFGYTWALVHHMLGGIRHLIWDTGRGFG
                     PHEREFLAMATLVGSVSLTIVVWIVGYLIIGGPR"
     gene            3713..4600
                     /locus_tag="VIQ50_06715"
     CDS             3713..4600
                     /locus_tag="VIQ50_06715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEY9360106.1"
                     /translation="MRFDLTDLSLFRHVVEAGSITGGAERAHLALAAASTRIRNMEEA
                     LGAALLVRGRQGVSPTQAGRTLLQHARAILRQAERLREDLGVYAGGLAGQIRVLSNTN
                     ALTEFLPEALSSFLSEHPNVSIDLEERLSDEIVGLIAEGVGDLGIVAATVDVSALETY
                     PFRKDRFVLAVAREHPLARRSKIAFADVLEHDFVGLDRASALQRFLADKAARIGQPLR
                     LRVQLRSFDAVCRLVECNVGIGIVPETTARRVARTMAIVAVELTDPWASRELTICIRS
                     LEELPPYARQLVEHLRRPT"
     gene            complement(4612..>4813)
                     /locus_tag="VIQ50_06720"
     CDS             complement(4612..>4813)
                     /locus_tag="VIQ50_06720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012455856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360107.1"
                     /translation="FAGATVFAWSEVLAKAQVPGREDVGALRLRTVAAKDRPCADFPL
                     KSGEEDDPAVLLDLDYWVLMPR"
BASE COUNT          856 a         1531 c         1560 g          866 t
ORIGIN      
        1 aggatagcag cgcaggttca acgcagaagg cggggcttgc gctccagttg cgctgcttgt
       61 gcagcgcgga tcacatctga cggaggatca cacttgccgc tcgaccatca tgcgcctgat
      121 ctcggcgatc gccttggccg gattgaggct cttcgggcag gctttggcgc aattcatgat
      181 cgtgtggcag cggtagagac ggaagggatc ctcgagggta tcgaggcgcc gtccggtcgc
      241 ctcgtcgcgg ctgtctttgt gccagcggtg cgcctgcagc aacgccgccg gtccgaggaa
      301 acgctcgctg ttccaccagt agctcgggca ggcggtcgag cagcacgcgc acaggatgca
      361 ctcgtagagg ccgtcgagct tctggcggtc ttcgtggctc tgtctccact ccttctgcgg
      421 cgtgggcgtg gtggtctgca gccacggctc gatcgcggcg tgctgggcat agaaattgct
      481 aagatctggc accagatcct tcaccaccgg catgtgcggc aacgggtaga tcttcaccgt
      541 gctcttgatg tccgccatcg ccttggtgca ggcgagcgta ttggtgccgt cgatgttcat
      601 cgagcaggag ccgcagatgc cttcgcggca ggagcggcgg aacgtgagcg tcgggtcgat
      661 gttgttcttg atccaaatga gcgcgtcgag aaccatcggc ccgcagtcgc cgcagtcgac
      721 ataataggta tcaatgcgcg gatttttgcc gtcgtccgga ttccagcggt agatgcgata
      781 ttcgcgcagg tcgtgcgcgc cggctggggc cgtccaggtc gtgccgtcgg tgaccttgga
      841 gttcttcggc agcgtgaatt gaaccatgtg atcttttgcc ttccgtccct agtacacgcg
      901 cttccgcggc tcgatgtagg ccatctcgtt ggtgagcgtg taggcgtgca ccggccggta
      961 gtcgatggtg accttgccgt tggcatcgag ccaggccagc gtatgcttca tccagttctt
     1021 gtcgtcgcgc tcggggaagt cctcgcgcgc atgcgcgccg cgactctcgg tgcggttctt
     1081 cgccgattcc atcgtgacga ccgcctgggc gatcaaattg tcgaattcca gcgtctcgat
     1141 caggtccgag ttccagatca gcgagcggtc cgtaaccttg atgtcggcga cgccgccgta
     1201 aacttcgtga atgagcttct cgccctcttc aaggacctcg gcggtgcgga ataccgcgca
     1261 attattctgc atcaccttct gcattttcag acgcagctgc gccgtcggtg tcgttcccgc
     1321 ggcgtggcgg aacttgtcga gccgcgccaa cgcgcgctcg gcggagtctt tcggcaagtc
     1381 gggatggctt tcgcccggac gcaaaacctc cgcgcaacgc gaggcggcgg cgcggccgaa
     1441 cacgacaagg tcgatcagcg aattcgagcc cagccgattg gcgccgtgca ccgacacgca
     1501 agccgcctcc ccgagcgaca tcagaccggg caccacgaag tcgtcgttgc cgttcttctt
     1561 ggtcagcgcc tcgccgtgat agttggtggg aatgccgccc atgttgtaat gcacggtcgg
     1621 aacgatcgga atcggatcgc acgtgacgtc caccccggcg aaaatgcgcg ccgattcgga
     1681 aatgccgggc agccgctcgt gcagcacctc ggggtcgaga tggtctaggt gcagatatat
     1741 gtggtccttg tgcttgccga ccccccgccc ctcccggatc tcgatggtca tcgcgcgcga
     1801 gacgacatcg cgtgaggcga gatccttggc ggacggtgca tagcgctcca tgaagcgttc
     1861 accctccgag ttgacgaggt aggcgccctc cccgcgtgcg ccttcggtaa tcaggcagcc
     1921 cgcgccgtag atgccggtcg ggtggaactg cacgaactcc atatcctgca gcggcaggcc
     1981 ggcgcgcagc accatggcgt tgccgtcgcc ggtgcaagta tgcgcggagg tacaagagaa
     2041 ataggcgcgg ccgtaaccgc cggtggcgag gatcgtcatg tgcgcgctga agcgatggat
     2101 cgagccgtcg tcgagcttga tcacgaccac gccgcggcag cggccctcgt cgtctatgat
     2161 cagatcgatg gcgaagaact cgatgaagaa ctcggcggcg tggcgcaacg cctgcccgta
     2221 catggtgtgc agcatggcgt gaccggtgcg atcggccgcg gcgcaagtgc gctgcgcgat
     2281 gcccttgccg taatgcgtgg tcatgccgcc gaagggacgc tgatagattt tgccgtcctc
     2341 ccggcgcgag aacggcagac cccaatgttc caactcgtac accgcctgcg gcgcgctgcg
     2401 gcacatgtac tcgatggcat cctggtcgcc gagccagtcg gcgcccttga cggtgtcgta
     2461 catgtgccag cgccagtcgt cctcgcccat attgccgaga gcggcggcga tgcccccttg
     2521 cgccgctacg gtgtgcgagc gggtcgggaa taccttggtg atgcaggcgg tcttgagccc
     2581 cgcctcgctg cagccgacca ccgcgcgcag gccagatcct ccggcgccga ccacgaccac
     2641 gtcgtagtcg tggtcctcga tcggataggc gcgtccgttg accgccggtc ccttgccatt
     2701 cgatccgccg ttgatagcca cgggtcacac cttgaagctg agcatgagga tggcgaaggc
     2761 cgaggagagc cccacggcga cggcgaagaa ggtgttggca atcaccagga tgaacttcct
     2821 cgcctcgtca tgcacgtagt cctcgatgat aacctgcatg ccgatgcgca tatgcgtcgt
     2881 caccgagatg atgaacagca gcatgatgat ggcgatgagc ggcgagccca gaatctgcac
     2941 cacggcggca tgattgcgtc cgagcagcgc caccacaacg aagacgaaag agatggtgag
     3001 cggcacgttg gcaatggccg tcaggcgctg gcgccagaaa tgctcggtgc cggacttggc
     3061 cggtccgagc ccgcgcacgt gcttgagcgg cgtgctcatg tcgcggaacg ccatcagcgc
     3121 ggtcccccga tgatcagata gccgacgatc cagacgacga tagtcaagct gacggaaccg
     3181 acgagggtgg ccatcgccag aaattcgcgc tcatgtggac cgaagccgcg cccggtatcc
     3241 cagatcaggt gccggatgcc gcccaacatg tgatgcacga gcgcccaggt atagccgaac
     3301 aggatcactc ggccgaacaa cgagttgata aacgagccga tgccagcata agacttggga
     3361 ccggatgccg ccgcgatcag ccaccaggcg accagcaacg tgccgaaata gagggcgcca
     3421 ccggtgatgc gatggacgat ggacatcatc atcgtcagca tcggcttgta gatgaagaga
     3481 tgaggagaga gcggccgctc agcgggcgcc ttggcgtcgg ccattgctgt tctccgtcct
     3541 cgcgcgccca gcgttggtaa ccaaagtcgc cgcgagccgc aatccgcccc gcggcaggcg
     3601 ctgctttcgt caaccgcgaa tatggccctc aggcacttgg ccgacaatag gtatttcgcg
     3661 tagctttact tcgtcgaatt cgaaggcagg caaagtcctg gcagcgggaa ccgtgcggtt
     3721 cgacctcacc gatctcagcc tattccgcca tgtggtcgag gcggggagca taacgggcgg
     3781 cgccgagcgc gcgcatctcg cactcgctgc cgccagcacg cgcattcgca acatggagga
     3841 agcgctgggc gctgccttgc tcgtgcgcgg gcggcaaggc gttagcccga cccaagccgg
     3901 ccgcacgctc ctgcagcatg cgcgcgcgat cttgcggcaa gccgaacggc tgcgcgaaga
     3961 cctcggcgtc tatgctggcg gactcgccgg ccaaatcaga gtgctctcca acaccaacgc
     4021 gctcacggaa ttcctgccgg aagcgctgag ctcattcctt tccgagcacc ccaatgtcag
     4081 catcgatctc gaggagcggc tgagcgacga gatcgtcgga ctcatcgccg aaggggtcgg
     4141 cgacctcggc atcgtcgctg ccaccgtcga cgtgagcgcg ttggaaacat atcctttccg
     4201 caaggaccgg ttcgtgttgg ccgtggcgcg cgagcatccc ctcgccaggc gctcgaagat
     4261 cgcgttcgcg gacgtgctcg agcacgactt cgtcggtctc gaccgcgcca gcgcgctgca
     4321 gcgtttcctc gcggacaagg cggcgcggat cgggcagccg ctgcggctgc gcgtgcagtt
     4381 gcgcagcttc gacgcggtat gccgcctggt cgagtgcaac gtcggcatcg gcatcgtacc
     4441 cgagaccacc gcgcgacgcg tggcgcgcac catggcaatc gttgcggtgg agttgaccga
     4501 cccgtgggcg tcgcgcgaac tcacgatctg catccggagt ctcgaggagc tgccgcccta
     4561 tgcccgtcaa ctcgtcgagc acctgcgcag gcccacgtga gcaaagccgt gctaacgcgg
     4621 catcagcacc caataatcga gatcgagcaa caccgcgggg tcgtcctcct cgcccgattt
     4681 gagcggaaag tcggcgcacg ggcggtcctt ggccgcgacg gtgcgcagcc gcagcgcgcc
     4741 gacgtcctcg cgtccgggca cctgcgcctt ggccaagacc tcggaccagg caaacacggt
     4801 cgctccggcg aat
//
LOCUS       DATCWM010000352         2174 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_353581, whole genome shotgun sequence.
ACCESSION   DATCWM010000352 DATCWM010000000
VERSION     DATCWM010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2174)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2174)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2174
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_353581"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..697)
                     /locus_tag="VIQ50_06725"
     CDS             complement(<1..697)
                     /locus_tag="VIQ50_06725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018454821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY9360108.1"
                     /translation="MTAHLDTFARDNLPPRAQWPDFLFEMPELKYPERMNCVVELLDR
                     SLAAGRGNRPCLISPTETLTYAQLAERVNRIANVLTRTLGIVPGHRVLLRGPNSPMMV
                     AAYLAVIKAGAVVVATMPLLRAKEIAYPIAKAKIRLALCDHRLAEEMEKARALAGDLE
                     RVVYWGSGAADALEALMATPGYDTFFPCDTASDDVCLIGFTSGTTGEPKGTMHFHRDM
                     LATCDSYGRHVLCA"
     gene            complement(758..1948)
                     /locus_tag="VIQ50_06730"
     CDS             complement(758..1948)
                     /locus_tag="VIQ50_06730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY9360109.1"
                     /translation="MGLEETLSWPFFDDGHRRFAAAITRFADATLAGLPHDDVDAACR
                     ARVKALGEAGFLKAVVPAEHGGLHRSLDVRTLCLAREILAFRDGLSDFAFAMQGLGTA
                     SISLFGSPALTARYLPPVRDGRAIAAFALSEPEAGSDVAALATTAKADGASHLRIDGS
                     KTWISNGGIADHYVVFARSGEAPGAKGLSAFVVDADAPGLSVAERIEVIAPHPLAALR
                     FEGVRVPLANRLGGPGDGFKVAMATLDVFRSTVGAAALGFARRALHETVERAASRKLF
                     GAPLAELQLTQGAMADSASEVDASALLVYRAAWTKDQGAARVSREAAIAKMFATEAAQ
                     RVIDRAVQLHGGFGVTKGVKVEELYREIRALRIYEGATEVQKVVIARELLKQRAGKSA
                     LAAE"
     gene            complement(1951..>2174)
                     /locus_tag="VIQ50_06735"
     CDS             complement(1951..>2174)
                     /locus_tag="VIQ50_06735"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088822.1"
                     /note="Catalyzes the reversible hydration of unsaturated
                     fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HEY9360110.1"
                     /translation="VLAQAQQIAAELAAGPTFANGMTKRMLDMEWAMSVESAIEAEAV
                     AQALCMETEDFARAFRAFAAKQKPVFEGN"
BASE COUNT          345 a          748 c          737 g          344 t
ORIGIN      
        1 cggcgcacag cacgtggcgc ccgtagctgt cgcaggtcgc aagcatgtcg cggtggaaat
       61 gcatggtgcc cttgggctcg ccggtcgtgc cagaggtgaa gccgatgagg cagacatcgt
      121 cgctcgccgt gtcgcacggg aagaaggtgt cgtagcccgg cgttgccatc agcgcttcga
      181 gcgcatcggc cgcgccgcta ccccaataga cgacgcgctc gagatcgcct gccagcgcgc
      241 gggctttctc catctcctcg gccaggcggt gatcgcagag cgcgagtcgg attttggcct
      301 tggcaatcgg gtaggcgatc tcctttgcgc gcaagagcgg catggtcgcg accacgacgg
      361 cgccggcctt gatgacggcg agataggccg ccaccatcat cgggctgttc ggcccgcgca
      421 gcagcacgcg atgtccgggc acgatgccga gcgtgcgcgt gagcacgttg gcgatgcggt
      481 tcacccgctc ggccagttgc gcgtaagtca aggtttccgt cggcgagatc aggcacggcc
      541 ggttgccgcg gcccgccgcg agggagcggt ccagcaactc gaccacgcaa ttcatccgtt
      601 cgggatattt caactccggc atctcgaaca ggaaatccgg ccattgcgcg cgcgggggca
      661 ggttgtcgcg cgcgaacgtg tcgagatgcg cggtcatggc tgtcgctcct cggcaaattc
      721 catcatacgc accgctcggc tctctactcc ccgcgtgtca ctccgctgcc agtgccgatt
      781 tgcccgcccg ctgcttcaac agctcgcgag cgatcacgac cttctgcacc tcggtcgcgc
      841 cttcgtagat gcgcagcgcc cggatctcgc ggtaaagctc ctcgaccttg acgcccttgg
      901 tgacgccgaa accgccatgc agctgcaccg cgcgatcgat cacccgctgc gccgcctcgg
      961 tcgcgaacat tttggcgatt gccgcctcgc gggaaacacg cgcggcgccc tggtctttgg
     1021 tccaggcggc gcgatagacg agcagcgccg acgcgtcgac ctcgcttgcg ctgtcggcca
     1081 tcgcgccctg cgtgagctgc agctcggcga gcggcgcgcc gaagagcttg cggctcgctg
     1141 cgcgttccac ggtttcatgc agcgcgcggc gggcgaagcc gagcgcggcg gcgcccacag
     1201 tggagcggaa cacatcgagg gtcgccatgg cgaccttgaa gccgtctccc ggcccaccca
     1261 ggcgattggc gagcggcact cgcacccctt cgaatcgcag cgcggccaag ggatgcggcg
     1321 cgatgacctc gatgcgctcg gcgacgctca gtccgggcgc atcggcatcg accacgaagg
     1381 cagagagccc cttggcgccg ggcgcctcgc cgctgcgcgc gaatacgacg tagtgatcgg
     1441 caatcccgcc gttggaaatc caggtcttgc tgccgtcgat gcgcaggtgc gaggcgccgt
     1501 cggccttggc cgtcgtcgcc agggcggcga catcggagcc cgcctccggc tcggagagcg
     1561 cgaaggcggc gatggcgcgg ccgtcgcgca ccggcggcag atagcgcgcc gtgagcgccg
     1621 gcgagccgaa tagcgagatc gaggcggtgc ccagcccctg catggcgaag gcaaagtcgg
     1681 acaggccgtc gcggaaggcc aaaatctcgc gcgcaaggca gagcgtgcgc acgtcgagac
     1741 tgcgatgcag cccgccgtgc tcggccggca ccaccgcctt gaggaagcct gcctcgccga
     1801 gcgccttgac ccgtgcgcgg caggccgcgt ccacgtcgtc gtgcggcaag cccgcaagcg
     1861 tggcatcggc aaagcgcgtg attgccgcgg cgaagcggcg atgcccgtcg tcgaaaaatg
     1921 gccagctcag ggtttcctcg agacccattt tcagttgccc tcgaagaccg gcttctgctt
     1981 ggcagcgaag gcgcggaatg cgcgtgcaaa atcctccgtc tccatgcaca gtgcctgggc
     2041 gaccgcttca gcctcgatgg cgctctcgac cgacatcgcc cactccatgt cgagcatgcg
     2101 cttggtcatg ccattcgcga aggtggggcc ggcggcgagc tccgcggcga tctgctgcgc
     2161 ctgcgctaag accg
//
LOCUS       DATCWM010000353         4215 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_440015, whole genome shotgun sequence.
ACCESSION   DATCWM010000353 DATCWM010000000
VERSION     DATCWM010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4215
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_440015"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..406)
                     /locus_tag="VIQ50_06740"
     CDS             complement(<1..406)
                     /locus_tag="VIQ50_06740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose 1,5-bisphosphate carboxylase"
                     /protein_id="HEY9360111.1"
                     /translation="MHPRLQAIYLVRCDARSIEERARAIAVEQSVEMPVSAITDDFVR
                     SEIVGRVETIAEKERNLFEVRVSLAAETVGRDPGQLINMLFGNTSLHEDVVLADVTVP
                     KELIEAFGGPRHGLDELRRRVGAPVRALTASPL"
     gene            complement(416..907)
                     /locus_tag="VIQ50_06745"
     CDS             complement(416..907)
                     /locus_tag="VIQ50_06745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEY9360112.1"
                     /translation="MKRLSLSATRRALEPALRRALHAYWRFARAMTLGVRALVIDEEG
                     RIFLVKHSYVSGWHLPGGGVEAGETLAEALARELREEGNIEITAPPRLHGLFFNNRAS
                     RRDHVALFVVRAFRQSAVPVPDREIVAHGFFAADALPNDTTAATRARIIEVLGGAPVS
                     ERW"
     gene            1030..1986
                     /locus_tag="VIQ50_06750"
     CDS             1030..1986
                     /locus_tag="VIQ50_06750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin family protein"
                     /protein_id="HEY9360113.1"
                     /translation="MKRFADLTEQEILALAITNEDEDSRIYRGFAEGLRKTYPASAKV
                     LDEMADEEVRHRTMLFDLYRSKFGEYLPLIRRQDVKGFIQKKPLWLMHPLNLDEVRKF
                     AENMEYEAARFYRRATETSRDASVRQLLVELGEAEVEHESLAHKLGQQILTPSARAKE
                     DEAARRMFVLQYVQPGLAGLMDGSISTLAPLFAAAFATHNTWETFLVGLAASVGAGIS
                     MGFAEALSDDGSLTGRGAPVVRGVVCGVMTAIGGLGHTLPYLIPNFWTATAVAIAVVA
                     VELVAISYIRHRFMDTPFLAATFQVVVGGALVFVAGILIGSS"
     gene            2010..2900
                     /locus_tag="VIQ50_06755"
     CDS             2010..2900
                     /locus_tag="VIQ50_06755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEY9360114.1"
                     /translation="MFVLAHLSDPHLGPLPRARLSELANKRAAGFFNWRRKRHRIHRA
                     EVLARITADLKAQAADHIAVTGDLVNISLAAEYAPASAWLAALGPPRDVTLVPGNHDT
                     YVRAAARYPQLHWGEYMRGDEAGETTFPFVRRRGSLVLIGLSTAVPTAPFLATGHLGP
                     AQIAMLAASLERYGREGLFRVVMLHHPPISKPARHFKRLVDGGELRAVLARQGAELVI
                     HGHDHVHSLIELEGPQRPIAVVGAPSASAVAPGRHDGAGYNLYRIAGDRGGWRWEAIW
                     RGLAGDGSEVVEIKRIELLR"
     gene            complement(2941..3687)
                     /locus_tag="VIQ50_06760"
     CDS             complement(2941..3687)
                     /locus_tag="VIQ50_06760"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEY9360115.1"
                     /translation="MRLDNKVALITGAASGFGQGIAETFAREGAQVAVVDINEKAARQ
                     AAASISNKAIALRCDVSQRADVDAATQATVDAFGRIDILVNNAGMSHVRRPMLEVEEA
                     EFDRLMAVNVKSIFLFAHAVVPLMRKQKSGVIINIGSTAGIRPRPGLTWYNASKAAVN
                     LVSKSMAVELAGDGIRVCAIAPVMAETPLLPTFMGGDSPELRAQFKATVPLGRFATVD
                     DVANATLFLASEEASFLTGNVLEVDGGRCV"
     gene            complement(3816..>4215)
                     /locus_tag="VIQ50_06765"
     CDS             complement(3816..>4215)
                     /locus_tag="VIQ50_06765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HEY9360116.1"
                     /translation="DAAREKNVTLLIEPINPRDRPDYFLTRAEQAADIIAKVERANVR
                     MQFDFYHAQIVGGDLIRRFEKHLPFVAHVQIAAVPSRHEPDEGEVNYPQIFATLDRLG
                     YGNWVGCEYRPRARTEDGLDWARAYGVKSP"
BASE COUNT          690 a         1436 c         1354 g          735 t
ORIGIN      
        1 tgagcggcga agcggtcaac gcccgcaccg gcgcaccaac ccgccgccgc agttcatcga
       61 gcccgtggcg cgggccaccg aaagcctcga tcagctcctt cggaaccgtg acatcggcga
      121 ggacgacatc ctcgtgcagc gaggtgttcc cgaacagcat gttgatgagc tgtccgggat
      181 cgcgcccgac ggtctcggcc gcgagcgaga cgcggacctc gaaaaggttg cgctcctttt
      241 ccgcgatcgt ctcgacgcgg ccgacgatct cggagcgcac gaagtcatcg gtgatcgccg
      301 agaccggcat ttcgacgctc tgctcgaccg cgatggcgcg tgcgcgctcc tcgatcgagc
      361 gcgcatcgca gcgcacgagg tagatggcct gcaggcgcgg atgcacgggc gccgctcacc
      421 atcgctcgct gaccggcgcg ccgccgagca cttcgatgat gcgggcgcgg gtcgcggccg
      481 tggtgtcgtt gggcagcgca tcggcggcaa agaagccgtg cgcgacgatc tcgcggtcgg
      541 gaaccggcac tgccgattgg cggaatgcac gaacgacgaa gagcgcgaca tggtcgcgcc
      601 gggaggcgcg attgttgaag aacagcccgt gcagccgtgg cggcgccgtg atctcgatgt
      661 tgccctcctc gcgcagctcg cgcgcgagcg cttcagcgag cgtttcgccg gcctcgacgc
      721 cgccgcccgg caagtgccag ccgctcacgt agctgtgctt gaccagaaag atcctcccct
      781 cctcgtcgat taccagcgcg cgcacaccga gcgtcatggc gcgcgcaaag cgccaataag
      841 cgtgcaacgc gcgccgcagc gcgggctcga gcgcgcggcg cgtcgcactg aggctgaggc
      901 gtttcatccc ggtctcgccg actatccgcg cttcatggca ggtgaggcaa tcgccctccg
      961 gcttgtcaaa agcgcagctt tgtagtttag aagtgttcta atatatgcca tctgcggagt
     1021 ggaggggccg tgaaacgctt tgccgatctc accgaacagg aaatcctcgc gctcgcgatc
     1081 accaacgagg acgaggatag ccgcatctat cgcggctttg ccgagggatt gcgcaagacc
     1141 tatccggcct cggccaaagt cctcgacgag atggcggatg aggaggtgcg ccatcgcacc
     1201 atgctgttcg atctctaccg gtcgaagttc ggcgagtact tgccgctgat ccgccgccag
     1261 gacgtcaagg gattcatcca aaagaaaccg ctgtggctca tgcacccgct caacctcgac
     1321 gaggtgcgca aattcgccga gaatatggaa tacgaggcgg cgcggttcta ccggcgcgcc
     1381 accgagacct cgcgcgacgc ctcggtgcgc caactcctgg tcgagctcgg cgaggccgaa
     1441 gtggagcacg agagtctcgc ccacaagctg gggcagcaaa tcctgacccc gagcgcgcgc
     1501 gccaaggagg acgaagccgc acggcggatg ttcgtgctgc agtacgtcca gccgggcctc
     1561 gccgggctga tggacggctc gatctcgacg ttggcgccgc tgtttgccgc cgcctttgcc
     1621 acccacaaca cctgggagac atttctggtc gggcttgccg catcggtcgg cgcgggcatt
     1681 tccatgggtt ttgccgaggc gctctccgac gatggctcgc tcaccggacg cggagcgccg
     1741 gtggtgcgcg gcgtggtgtg cggggtgatg accgcgatcg gcgggctcgg ccacacattg
     1801 ccctatctca ttcccaattt ctggaccgcg accgctgtcg ccatcgccgt ggtcgcggtc
     1861 gagctcgtgg ccatctccta tatccgccat cgctttatgg atacgccttt tctcgcggcg
     1921 acgtttcagg tcgtcgtcgg cggcgcgctg gtgttcgtcg ccggaatttt gatcggcagc
     1981 tcgtgacggc cggcaactga catccagtga tgttcgtcct cgcgcatctg tcggatcccc
     2041 atctcggacc gttacccaga gcccgtctct cggagctcgc caacaaacgc gccgccggct
     2101 ttttcaattg gcggcgcaag cgccaccgca tccatcgcgc cgaggtgctc gcgcgcatta
     2161 ccgcggatct caaggcgcag gcggcggacc acatcgcggt gaccggcgac ctcgtcaaca
     2221 tctcgctcgc cgccgaatac gcgccggcaa gcgcttggct cgccgcgctc gggcctccgc
     2281 gcgacgtcac cttggtgcca ggcaatcacg acacctatgt gcgcgccgcc gcgcgctatc
     2341 cgcagctcca ctggggcgag tatatgcgcg gcgacgaggc cggcgagacg acgtttccct
     2401 tcgtgcgccg gcgcggctcc ctggtgctga tcggattgtc gaccgcggtg ccgaccgcgc
     2461 ccttcctggc aaccggccat ctcggacccg cgcagatcgc tatgcttgcc gcgtcgctcg
     2521 agcgctacgg ccgcgaaggg ctcttccgcg tggtcatgtt gcatcatccg ccgatcagca
     2581 aaccagcgcg ccacttcaag cgcctcgtcg acggcggcga gttgcgcgcg gtgctggctc
     2641 ggcagggggc cgagcttgtc attcacgggc acgaccatgt gcactcgctc atcgaactcg
     2701 aggggccgca gcgccccatc gcggtcgtgg gcgcgccctc agcctccgca gtggcaccgg
     2761 gccgacacga tggcgccggc tacaatctct accggatcgc cggcgaccgc ggcggctggc
     2821 gctgggaagc gatttggcgc ggccttgcag gcgacggcag cgaggtcgtg gagatcaagc
     2881 ggatcgagct tctccggtag gggagttttc ccgagccgcc agcgcaccgt cccgcgatgc
     2941 ctaaacgcag cggccgccgt cgacctcgag cacgttaccg gtgagaaatg aggcctcctc
     3001 agaggcgaga aacagcgtgg cgttggcgac gtcgtcgacg gtcgcgaagc gcccgagcgg
     3061 caccgttgct ttgaactgcg cgcgcagctc cggcgagtcg ccgcccatga aggtcggtaa
     3121 cagcggcgtc tccgccatca ccggcgcgat cgcacagacg cggatgccgt cgcccgccag
     3181 ctcgaccgcc atcgatttgg acacgagatt caccgcggcc ttggaggcgt tgtaccacgt
     3241 caggcccggc cgcggcctga tcccggcggt cgagccgata ttgatgatca ccccggattt
     3301 ctgtttgcgc atcagcggca caacagcatg cgcgaacagg aagatcgatt tgacgttcac
     3361 cgccatgagc cggtcgaatt ccgcctcttc cacctccagc atcggccgcc gcacatggct
     3421 cattccggca ttgttgacga ggatgtcgat tcgtccgaac gcatcgacgg tcgcctgtgt
     3481 cgctgcgtcc acgtcggccc gctgcgacac gtcgcagcgc agcgcgatcg ccttgttgct
     3541 gatcgacgcg gcggcttggc gcgcggcctt ctcgttgatg tcgacgacgg ccacctgcgc
     3601 gccctcgcgc gcgaatgtct cggcgatgcc ttgaccaaag cccgatgcgg cgccggtgat
     3661 cagcgcaacc ttgttgtcga gacgcatgct cgtctcccct cgtaatgctg ctgccatcga
     3721 tgacgaatgt agctgagaac agcgctgtcg tcgtcgcgca agcggagcgc catagtccag
     3781 gcccggtggt tatgggcccc cctcggtcca acgcttcaag gcgatttcac cccgtaagcc
     3841 cgcgcccagt ccaagccgtc ctcggttcgc gcgcgcggcc ggtactcgca accgacccag
     3901 ttgccgtagc cgagccgatc gagcgtcgcg aagatttgcg gatagttcac ctcgccttcg
     3961 tcgggctcgt gtcgcgacgg aaccgccgcg atctgcacgt gggcgacgaa cggcagatgc
     4021 ttctcgaacc ttctgatcag atcgccgccg acgatctgcg cgtgatagaa gtcgaactgc
     4081 atgcgcacat tcgcccgctc caccttggcg atgatgtcgg ccgcctgctc ggcgcgggtg
     4141 agaaaataat ccggccggtc gcgcggattg atcggctcga tcaataacgt gacgttcttc
     4201 tcccgcgccg catcg
//
LOCUS       DATCWM010000354         3047 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_407752, whole genome shotgun sequence.
ACCESSION   DATCWM010000354 DATCWM010000000
VERSION     DATCWM010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3047
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_407752"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..455
                     /locus_tag="VIQ50_06770"
     CDS             <1..455
                     /locus_tag="VIQ50_06770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY9360117.1"
                     /translation="IADASSRDATVAIADEAGCRVLDSTLPRGTRLKTAAGTARASWL
                     LFLQPGAVLDANWVEETRRFIEEVELRKDCLNAGVFRPGPFSSAAHEILALLRAALGA
                     WPDPSQGLVIAKSLYDAMGGHRDVPAPERDLFRRVGRKRLVWLRTGAI"
     gene            510..1457
                     /locus_tag="VIQ50_06775"
     CDS             510..1457
                     /locus_tag="VIQ50_06775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing GNAT family
                     N-acetyltransferase"
                     /protein_id="HEY9360118.1"
                     /translation="MAAISTVGFEARVGAVRRFNRLYTRRIGVLEDGFLGSPYSLTQA
                     RVLYELAQRPTSTATQVAAELGLDHGYLSRILRGFIERGLIVKTGSPDDRRQSLLSLT
                     AKGRMAFAPLDEHSQNEVAAMLGALAVADQERVVAAMRTIEGSLCEAPTAQIPYLLRP
                     PRPGDMGWIVSRHGALYREEYGWDERLEALIAEIVAGFVRNHDRERERCWIAEKAGEN
                     VGSVLLVRETDEVARLRLLLVEPRARGLGVGGRLVEEAVRFAREARYRKVTLWTHTVL
                     TAARRVYERAGFELTHQWTHDMFGKQLSAETWDLELHQR"
     gene            complement(1546..2109)
                     /gene="moaB"
                     /locus_tag="VIQ50_06780"
     CDS             complement(1546..2109)
                     /gene="moaB"
                     /locus_tag="VIQ50_06780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein B"
                     /protein_id="HEY9360119.1"
                     /translation="MPGIDSSRQFVPLKIAVLTISDTRALEDDKSGATLIERIEKAGH
                     ALSARAVVPDEIGKIRAQVERWIADPAIDVVITTGGTGFTGRDVTPEAIEPLFEKRMD
                     AFATMFLLVSQAKIGTSAIQTRATAGVAGATYVFCLPGSPGACRDAWDDILVHQLDYR
                     YRPCNFVEILPRLDEHLRRAKAKGATA"
     gene            complement(2211..>3047)
                     /locus_tag="VIQ50_06785"
     CDS             complement(2211..>3047)
                     /locus_tag="VIQ50_06785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HEY9360120.1"
                     /translation="GGGLSIGAVVALGLIGWALGIDPSLLIGGAEVLNRPQVQAPPTA
                     RRTAAPQDDMGRFVSKVLGSTELQWKQLFAKDGRIYRAPVLVLYRGATHASCGGEAQS
                     AMGPFYCPADQKVYLDTSFFDQIATRFRGCDAGSRTCQFSEAYVIAHEVGHHVQNLLG
                     ILPKAQQAQRAADSRAAANHIQVQVELQADCLAGVWANRENEMLKNEGKPAFIEPGDV
                     EAALRTAAAIGDDTLQRRARGYVVPDSFTHGSSEQRQRWFNTGFRSGSVASCNTFAAA
                     QL"
BASE COUNT          516 a         1011 c          974 g          546 t
ORIGIN      
        1 tcattgccga cgcaagctcc cgcgacgcca ccgttgccat cgccgacgag gccggttgcc
       61 gcgtgctgga ctcaacgctc ccgcgcggga cgcgcctcaa aacggcagcc ggcacagcgc
      121 gcgcgtcctg gctgctcttc ctgcagcctg gcgccgtgct tgacgcgaac tgggtcgagg
      181 aaaccaggcg cttcatcgag gaagtcgagc ttcgcaaaga ttgcctgaac gccggcgtgt
      241 ttcgtcccgg ccccttcagt tcggccgcgc acgaaatact ggcgctgctg cgtgccgcgc
      301 tcggcgcatg gcctgaccca agccaaggat tggtgatcgc gaaatcgctt tacgatgcga
      361 tgggcggcca tcgcgacgtc ccggcacccg agcgcgacct cttccgccgc gtcggtcgga
      421 aacgactcgt ctggttgcga accggtgcca tttgatatta cttgactaag tcaacaatat
      481 gcttgacaat gtcacaaaca cggcccgcca tggcagcgat atccacagtc ggtttcgagg
      541 cgcgcgtcgg cgcggttcgc cgcttcaatc gcctctacac gcggcgcatc ggcgtgctcg
      601 aggacggttt tctcggaagt ccctattcgc tcacccaggc gcgcgtgctc tacgagcttg
      661 cgcaacggcc cacgtcgacc gcaacccagg tcgccgcgga actcgggctc gatcacggct
      721 acctcagtcg catcctgcgc ggcttcatcg agcgcggcct catcgtcaaa accggttcgc
      781 ccgatgatcg gcggcaaagc cttttgtctc tgaccgcaaa aggccgcatg gccttcgcgc
      841 cgctcgacga gcattcgcaa aacgaagtcg ccgcgatgct cggtgcgcta gcggtcgcgg
      901 atcaggaacg tgtggtcgcc gccatgcgca cgatcgaagg ttcgctgtgc gaagcgccga
      961 cagcacaaat cccttacctg ctgcggcccc cgcgccccgg cgacatgggc tggatcgttt
     1021 cgcgccatgg cgcgctctat cgggaggaat atggctggga cgagcggctc gaagcgttga
     1081 tcgcagaaat cgttgcaggt ttcgtccgca atcatgatcg cgagcgcgaa cgttgctgga
     1141 tcgccgagaa ggcgggcgag aatgtcgggt ccgtcctgct cgtgcgggag acggatgaag
     1201 tcgcacggct gcggctcctc ctggtcgagc cgagggcacg cggcctcggc gtcggcggcc
     1261 gattggtgga ggaggcggtg cgctttgcgc gcgaggcgcg ctaccgcaag gtgacgctgt
     1321 ggacgcacac cgtgctcacc gccgcccgcc gcgtctacga gcgagccggc ttcgagctca
     1381 cgcatcagtg gacgcacgat atgttcggca agcaactcag cgccgagacg tgggacctcg
     1441 aactgcacca gcggtgatgc agcattcgag ctcatcgcct cgtcgtccga tccgactccg
     1501 acgcggtcgc gcgcgccatc gttcgagatc cgcgcggacg cagcgctagg cggtggcccc
     1561 tttggccttg gcccgccgca agtgctcgtc gagacgcggc aagatctcga cgaaattgca
     1621 gggccgatag cggtaatcga gctgatgcac caggatatcg tcccacgcat cgcggcacgc
     1681 acccggtgac cccggcagac agaacacata ggtggccccg gcaacgcctg cggtcgcgcg
     1741 agtttggatc gccgaggtgc cgatcttggc ttggctcacc agcaagaaca tcgtggcgaa
     1801 agcgtccatg cgtttctcga acaacggttc gatcgcctcc ggcgtcacgt cgcgtccggt
     1861 gaagccggtc ccgccggtag tgatgaccac gtcgattgcg gggtcagcga tccatcgctc
     1921 gacctgggcg cggattttgc cgatctcgtc cggcacgacg gcacgggcgg acagggcgtg
     1981 acccgctttt tcgatgcgct cgatcaacgt cgccccagac ttgtcgtctt cgagtgcgcg
     2041 agtgtcggag atcgtgagca ccgcgatctt cagcggtacg aactgcctgc tgctgtcgat
     2101 tccgggcatg gtgcatactc actcataagc tggtgcttgc gcgaaagcgc cgggcttccg
     2161 cgaagcgtcc gcgcgatgca gccagttttt ggtcacgcca ctcgacgatc tcaaagctgc
     2221 gcggcggcga aggtgttgca gcttgcgacc gaacccgagc ggaagccggt attgaaccag
     2281 cgttggcgct gctcggagct tccatgcgtg aacgagtccg gaaccacgta gccgcgcgcg
     2341 cgtcgctgca acgtgtcatc gccgatcgcg gcggcggtgc gcaacgcggc ctcgacgtcg
     2401 cccggttcga tgaatgcggg cttcccctcg ttctttagca tttcgttttc gcggttcgcc
     2461 cacaccccgg caagacaatc ggcctgcagc tccacctgca cctggatgtg gttcgccgcc
     2521 gccctgctat cagccgcgcg ttgcgcctgc tgggccttgg gcagaatgcc gagcagattc
     2581 tgcacgtgat gcccgacctc gtgcgcgatc acgtacgcct cggagaattg gcacgttctg
     2641 ctgccggcgt cgcaaccgcg aaagcgcgtc gcgatctgat cgaagaagga ggtgtcgagg
     2701 tagaccttct ggtcggcggg acagtagaac ggccccatgg cgctttgcgc ttctccgccg
     2761 caactcgcgt gcgtcgcgcc gcgatagaga accagcaccg gcgcacgata gattctgccg
     2821 tccttggcga agagctgctt ccattgcagt tcggtgctgc caagcacctt gctgacgaag
     2881 cggcccatgt cgtcctgcgg cgccgcagtg cgtcgcgcgg taggaggcgc ctgcacctgc
     2941 ggccggttca gaacctccgc gccgccgatg agcaagctcg gatcgatgcc cagcgcccaa
     3001 ccgatgaggc cgagagcaac gaccgcgccg atgctcaagc ctccgcc
//
LOCUS       DATCWM010000355         7623 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_213199, whole genome shotgun sequence.
ACCESSION   DATCWM010000355 DATCWM010000000
VERSION     DATCWM010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7623
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_213199"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1598
                     /locus_tag="VIQ50_06790"
     CDS             <1..1598
                     /locus_tag="VIQ50_06790"
                     /inference="COORDINATES: protein motif:HMM:NF017964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amylo-alpha-1,6-glucosidase"
                     /protein_id="HEY9360121.1"
                     /translation="LPQPQPPEQALSLRLKLLANDRDHHGTMAVGGFAPEIVVEGERL
                     SLTDNAGVALSIRAPGGSIVPKREWYRDFALALEAERGLDSIDNHLCVGEVTLPLLPG
                     QWCGIGASLNGEPADDLEAALERRLDHDRRAVSTAIASSPAMRDAPPWIARLALAADA
                     FVFARPLVSVPDGQSVIAGYPWFGDWGRDTMISLPGLTLATGRPQVGHRILATFASFV
                     SQGMLPNVFPGAGDRAEYNTADASLWFFEAWRAYFEATKDVGALRAVFPVLSDMIDWH
                     EKGTRYGIAVDRADGLLKAGVTGVQVTWMDAKIGDWVVTPRIGKPVEINALWYNALRI
                     MSTFATTLGVPHRFGAAAEAAKRSFTRFLRADGEGLYDVIDGPNGDDASIRPNQIFAV
                     SLPHSPLAAADQATVVHACRRHLLTAYGLRSLAPGSPAYHAHYGGGVLERDGGYHQGP
                     VWPWLLGPFCLASYRVTGDAAAAQDLLAALSDELEDQGVGTIGEICDGDPPHQPRGAP
                     AQAWSVACTLDAWRLLRQAGHDM"
     gene            1633..4329
                     /locus_tag="VIQ50_06795"
     CDS             1633..4329
                     /locus_tag="VIQ50_06795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010682896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosidase"
                     /protein_id="HEY9360122.1"
                     /translation="MTIDPERRRLEQSRAGKKNWRRWGPYVSERQWGTVREDYSPGGT
                     AWDYFTHDQARSRAYRWGEDGIAGFCDDRQFLCLSVALWNGRDPILKERLFGLTNEEG
                     NHGEDVKELYYYLDAIPSYAYARMLYKLPQAAYPYEWLIEENARRRGSAAMEFELIDT
                     GIFDEDKYFDVEIEYAKADAEDVLMRLTVHNRGPEQASIHVLPQIWFRNIWSWSQGVK
                     RPVLQEQRGGRVRVEHEQLGVYAIAFEAPDRLLFCENETNFACVFGVSGAHGYCKDAF
                     HEYVIHSRNEAVNPAGEGTKAAGLYLRAIPPRGSTTIRLRLRAGEPRMDSFIGFDDIV
                     AQRKGEADAFYAALQKDIADEDMRRIQRQAFAGMLWNKQFYDYNVRRWLNGDPGQPPP
                     PEGHKHGRNSGWAHVIAGDIMSMPDKWEYPWFAAWDLAFHCATLSLIDADFAKAQLLL
                     LCEVRLMHPNGQLPAYEWAFGDVNPPVHAWAAMRVFQNDRNQTGGSGDFEFLERVFHK
                     LLLNFTWWVNRKDPQGMNIFEGGFLGLDNIGVFDRSRPLPTGGYIEQSDGTAWMAMFC
                     LNMLRISIELSRRDPAYDDMAIKFLDHFLHIAGAITDMGKEGLGLWNDEDKFFYDVLF
                     LPSGDEVPLRLRSMVGLIPLYAVGYIDRDLIEKRPELWRKFELYREQRADLVKLVSRW
                     NESGVEGRRLIALARVFRMTSLLRRMLDESEFLSPYGVRALSRSYLDHPYDFECDGSH
                     YRVKYEPGESESGLFGGNSNWRGPIWMPVNYLLIESLRRFHMFYGDGLKIECPTGSGV
                     MLTLDEIADELCRRVLKLFQRGADGRRPVFGGYEKFQTDPHFKDYILFHEYFHGDNGR
                     GCGASHQTGWTGLVANLISQLVHEQAADVTSTEPVAAEPVQG"
     gene            4374..5141
                     /locus_tag="VIQ50_06800"
     CDS             4374..5141
                     /locus_tag="VIQ50_06800"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEY9360123.1"
                     /translation="MSLKNKVAIVTGGNSGIGQAIVLELARQGANVVIDYVVHPEATE
                     KLEQQIAKLGSQCTGVEADVSKLAELQKMVDAAVSTFGRLDIMVNNAGVETRTSVLDT
                     TESQYDRVMAINLKSAFFGTQIAARQMIKQGGGGRIINITSVHEDWPMPGNTAYCLAK
                     GGMRMLTRTAGVELAKHNVLVVGVGPGAVATPINLSTMDDPAKLAQLNAAIPLGRMAR
                     PEEIASVVAFLAGDGASYLTATTIFADGGIMQSSVGL"
     gene            5152..6702
                     /locus_tag="VIQ50_06805"
     CDS             5152..6702
                     /locus_tag="VIQ50_06805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010683329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEY9360124.1"
                     /translation="MDQRFDVIIVGSGAGGGTLARHLAPSGKSILVLERGDWLKREAA
                     NWDAAAVFVQNRYVSPETWYDAHGRPFQPQVHYFVGGATKMFGAALYRLRQQDFGEVK
                     HYDGISPAWPIGYEELEPYYAKAEDMYHVHGLRGHDPTEPPASGPYPCPPVSHEPRIA
                     ELFEQLTTAGYHPFPAPCAIMLNEANMAYSTCIRCQTCDGFPCLVHAKSDAEVVAVRP
                     ALEFRNVTLLRNAKAVRLETNAAGTAVTQVVADVAGEREVFSGDIVVVSCGALNSAKL
                     LLMSHNDKHPNGLANGSDQVGRNYMFHNSQAVLAISREPNPTVFQKTIALNDFYFGME
                     GFEYPMGNIQMTGKSLAPMYRGEKPIETALLPMGLLRNLARHAVDFWLTTEDLPEPDN
                     RVTVDEFGKVTLTYKPNNQVAHQKLYDKLKSMLTHLGMHHHLIPRNLYMKTDIPLAGC
                     AHQAGTCRFGRDPKSSVLDVNCKAHQLDNLYVVDTSFFVSIGAVNPSLTAIANAIRVG
                     DHLLQRLA"
     gene            6724..>7623
                     /locus_tag="VIQ50_06810"
     CDS             6724..>7623
                     /locus_tag="VIQ50_06810"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9360125.1"
                     /translation="MASRTEIGVVYAAAVAQGLALVTFPAASSIFTSPDGFGFDSARY
                     GTMFVPQVVFAILASAFAPKLARRSSLRRVLLVGFAGNIVSMTLLALSRLLIGAPDTA
                     FAVLLFATAALGFGFGATVMALNTYAEAFFPAGIDRAVLVLNALLGLGTALAPVLVAL
                     VVAIGAWWLLPLLVACAVVLLSGIALTQPLHASADTAAGEVSIGWTNLPRRFWLYAAA
                     VFVYGIAETLNGNWAVLYLTTERGVSTGGAAFALAAFWAMVTLGRVLIAVISRLVPAR
                     WIYAALPVLLLLTFQVASRVQGQT"
BASE COUNT         1345 a         2443 c         2464 g         1371 t
ORIGIN      
        1 tcctgccgca accgcagccg ccggaacagg cgctgtcctt gcgactgaag ctgctcgcca
       61 acgaccgcga ccaccatggc acgatggcgg ttgggggatt tgcgcccgag atcgtggtgg
      121 agggcgagcg cctgtcgctc accgacaatg caggcgttgc gctgagcatt cgcgcgccgg
      181 gcggcagcat cgtgcccaag cgcgagtggt accgggattt cgcgcttgcg ctcgaggccg
      241 agcgcggcct cgactcgatc gacaatcact tgtgcgtggg cgaggtcacg ctgccgctcc
      301 tgccggggca atggtgcggc atcggtgcga gcctaaacgg cgagcccgcg gacgatctcg
      361 aggcggcgct cgagcgccgt ctcgatcacg accggcgcgc cgtctcaact gcgatcgcca
      421 gtagcccggc catgcgggac gccccgccat ggatcgctcg acttgcactt gcggccgatg
      481 ccttcgtctt tgccaggccg cttgtgagcg tgcccgacgg ccaatcggtc atcgccggct
      541 atccgtggtt cggcgactgg ggccgcgaca ccatgatcag cttgccgggc ctgacgctgg
      601 cgaccgggcg gccgcaggtc gggcaccgaa tccttgcgac cttcgcgagc ttcgtcagcc
      661 aggggatgct ccccaatgta tttcccggcg ccggcgaccg cgccgaatac aacaccgccg
      721 atgcatcgct gtggttcttc gaagcctggc gcgcctattt cgaggcgacc aaggatgttg
      781 gcgcgttgcg cgcggtgttc ccggtgctct cggacatgat cgattggcac gaaaagggga
      841 cacgctacgg tatcgccgtg gatcgagccg acggcctgct caaggccggg gttaccggcg
      901 tgcaagtgac gtggatggat gcgaagatcg gcgattgggt ggtgacgccg cgcatcggca
      961 agccggtcga aatcaacgcg ctgtggtaca acgccttgcg catcatgagc acgttcgcga
     1021 caacgctggg ggtgcctcat cgtttcggcg ccgcggcgga ggccgcaaaa cgaagcttca
     1081 cacgcttcct gcgcgcagac ggcgagggtc tctacgacgt gatcgacggt cccaatgggg
     1141 atgatgccag catcaggccg aaccagatat ttgcggtgag cctgccgcac agcccgctgg
     1201 ccgccgccga tcaggccact gtcgtgcacg catgccggcg ccatcttctc accgcgtacg
     1261 gcctgcgctc gctcgcgccg ggaagtcccg cataccatgc gcattacggc ggcggcgtcc
     1321 tggagcgcga cggtggctac caccaggggc cggtttggcc atggctgctc ggcccgtttt
     1381 gcctcgcaag ctatcgcgtc accggcgacg cagcggcggc acaagatctg ctggcggcgc
     1441 tgagcgatga gctcgaagac caaggggtcg gcacgatcgg cgagatttgc gacggagatc
     1501 ctccgcacca gccgcgcggc gcgccggcgc aggcgtggtc ggtcgcttgc acgctcgatg
     1561 cctggcgctt gctgcgtcag gccgggcacg acatgtgacg taggctcatg ggcgcgtttg
     1621 gacggatcac cgatgaccat tgaccccgaa cggcgacgtc tcgagcaaag ccgcgccggt
     1681 aagaagaatt ggcgccgctg gggcccgtat gtgagcgagc ggcagtgggg cacggtgcgc
     1741 gaggactaca gccccggcgg cacggcgtgg gattatttca cgcacgacca ggcgcgcagc
     1801 cgcgcctatc gctggggcga ggacggcatc gccggtttct gcgacgaccg gcagttcctc
     1861 tgcctgtctg tcgccctctg gaacggccgc gatccgatcc tgaaggaacg gctgttcggg
     1921 ttgaccaacg aagaaggcaa tcacggcgag gacgtcaagg agctctacta ctatctcgac
     1981 gccatcccca gctatgcgta cgcgcgcatg ctctacaagc tgccgcaagc cgcatacccc
     2041 tacgaatggt tgatcgagga gaacgcgcgc cgccgcggtt cggcggcgat ggaattcgag
     2101 ttgatcgaca ccggcatctt cgacgaggac aaatatttcg acgtcgagat cgagtacgcc
     2161 aaggcggacg cggaagacgt gctcatgcgg ctgaccgtcc acaaccgcgg cccggagcag
     2221 gcgtcgatcc acgtgctgcc gcaaatctgg ttccgcaaca tctggagttg gtcgcagggg
     2281 gtgaagcgac cggtgttaca ggagcagcgg ggcgggcgcg tgcgcgttga gcacgagcag
     2341 ctgggagtct acgcgatcgc gttcgaggcg ccggatcgcc tgctgttctg cgagaacgag
     2401 accaacttcg cgtgcgtatt cggcgtcagc ggtgcgcatg gctactgcaa ggacgccttc
     2461 cacgagtacg tcatccacag ccgcaacgag gcggtgaacc cggcgggcga aggcaccaaa
     2521 gcggcggggc tttatctacg cgcaatcccg cctcgcggca gcaccaccat ccgtctgcgg
     2581 ctgcgcgcgg gtgagccgcg catggattcc ttcatcggct tcgacgacat cgtggcgcag
     2641 cgcaagggag aggcggacgc cttctacgcc gcgctgcaga aggacattgc cgacgaggat
     2701 atgcgccgca tccagcggca agccttcgcc ggcatgctgt ggaacaagca attctacgat
     2761 tacaacgtgc gccgatggct caacggcgat cccggccaac cgccgccgcc cgaggggcac
     2821 aagcacggcc gcaacagcgg ttgggcgcat gtcatcgccg gcgacatcat gtccatgccg
     2881 gacaaatggg aatacccctg gtttgccgcc tgggatctcg cgtttcactg cgccacgctg
     2941 tccttgatcg atgcggattt cgccaaggcg cagctgctgc tcctttgcga ggtgcggctg
     3001 atgcatccca atggtcagct gccggcgtat gaatgggcgt tcggcgacgt caacccgccg
     3061 gtgcacgcgt gggcggcgat gcgcgtgttc cagaacgacc gcaatcagac gggcggcagc
     3121 ggcgatttcg aattcctgga gcgggtgttc cacaagctgc tgctcaactt cacctggtgg
     3181 gtgaaccgaa aagatccgca aggcatgaac atcttcgaag gcggcttcct cggcttggac
     3241 aatatcggcg tgtttgaccg ttcacggccc ttgcccaccg gcggctacat cgagcagtcc
     3301 gacggcacgg cctggatggc catgttttgc ctcaacatgc tgcgcatctc gatcgaactc
     3361 agccggcgcg atccggcgta cgacgatatg gcgatcaagt ttctcgacca ttttctgcac
     3421 atcgccgggg cgataaccga tatgggcaaa gagggcctcg gcctctggaa cgacgaggac
     3481 aagttctttt acgacgtgct gtttttgccc tcgggagacg aagtcccgct gcgcctgcgt
     3541 tccatggtcg gattgattcc cttgtatgcc gtcggctaca tcgaccggga cctcatcgag
     3601 aagcggcccg aactctggcg caagttcgag ctctatcgcg agcaacgggc cgatctagtg
     3661 aagctcgtct cacgctggaa cgagtccggc gtggaagggc ggcgcctgat cgcgctggcg
     3721 cgcgtgttcc gcatgaccag ccttttgcgg cgcatgctcg acgagtccga attcctctcc
     3781 ccctatggcg taagagcctt gtcgcggagc tatctcgatc atccttacga tttcgaatgc
     3841 gacgggtccc attaccgcgt gaaatacgag ccgggcgaat ccgagagcgg cctgttcggc
     3901 ggcaactcga attggcgcgg gccgatctgg atgccggtca attatctgct gatcgagagc
     3961 ctgcgccgct tccacatgtt ttacggcgac ggcctcaaga tcgaatgccc gaccggctcg
     4021 ggcgtcatgt tgaccctcga tgagattgcc gatgagttat gccgccgcgt gctcaagctg
     4081 ttccagcgcg gcgccgacgg caggcgcccg gtgttcggcg gctacgaaaa atttcaaacc
     4141 gatccccatt tcaaggatta catcctgttc catgaatact tccacggcga caacggccgc
     4201 ggctgcggcg catcgcacca gaccggttgg accgggctgg tggcgaatct gatcagtcag
     4261 ctcgtgcacg aacaagctgc tgatgtcaca agcacggaac cggtggcggc tgagccggtt
     4321 caggggtgag gaaggccgct cgagcggctc attggtcatc gaggacacga accatgtcgc
     4381 tgaagaacaa ggttgcgatc gtcaccgggg gcaacagcgg gattggccag gcgatcgtcc
     4441 tggaactcgc gcgccagggg gccaacgtcg tcattgacta cgtggtgcat ccggaggcga
     4501 ccgaaaagct ggagcagcag atcgcgaaac tcggcagtca atgcaccggg gtcgaagctg
     4561 acgtgagcaa gctcgcggag ctccagaaaa tggtcgatgc ggcggtcagc acattcggcc
     4621 ggctcgacat catggtcaac aacgccggcg tcgaaacgcg cacctccgtg ctcgacacga
     4681 ccgagtcgca gtacgaccgg gtcatggcga taaacctcaa gagcgcgttt ttcggcacgc
     4741 aaatcgcagc gcggcagatg atcaagcagg gcggcggagg ccgcatcatc aatatcacct
     4801 cggtgcatga ggactggccg atgcccggca atacggccta ctgcctcgcc aaaggcggca
     4861 tgcgcatgct cacccgcacc gccggtgtcg aactcgccaa gcacaacgtc ttggtcgtcg
     4921 gcgtgggacc gggtgcagtg gcgacgccga tcaatctcag caccatggac gatccggcga
     4981 agctcgcgca gctcaatgcg gccataccgc tcgggcgcat ggcgcgcccc gaggagatcg
     5041 ccagcgtggt ggctttcctg gccggagacg gcgccagcta tctcaccgcg accacgatct
     5101 tcgccgacgg cgggatcatg cagtccagcg tcggcctcta gagagccgga catggatcag
     5161 cgcttcgacg tcatcatcgt cggcagcggc gcgggcggcg gcactctggc aagacatctc
     5221 gctccttcgg gaaagagcat cctcgtcctc gagcgcggcg attggctcaa gcgcgaggcg
     5281 gcgaactggg atgcggcggc ggtgttcgtg caaaaccgct acgtctcgcc cgagacctgg
     5341 tacgacgcgc acggccggcc gtttcagccg caggtgcatt acttcgtcgg cggcgcgacc
     5401 aagatgttcg gcgcggcgct ctaccggctg cggcagcagg acttcggcga ggtcaagcac
     5461 tacgacggca tctcgccggc ttggccgatc ggctacgagg agctcgagcc ctattacgcc
     5521 aaggccgagg acatgtatca cgtgcacgga ttgcgcgggc atgatccgac cgagccgccg
     5581 gcgagcggac cttatccatg tccgccggtt tcccatgagc cgcgcatcgc ggaactgttc
     5641 gagcaactca cgacggccgg ctatcacccg ttcccggcgc cctgcgcgat catgctgaac
     5701 gaggccaata tggcctacag cacctgcatt cgctgtcaga cctgcgatgg ctttccttgc
     5761 cttgtgcacg ccaaatccga cgcggaggtc gtggcagtgc gtcccgctct cgagttccgc
     5821 aacgtgacgc tgttgcgcaa cgccaaggcg gtgcggctgg agaccaacgc cgcgggcacg
     5881 gcggtgacgc aggtcgtcgc cgacgtcgcg ggtgagagag aggtcttcag cggcgacatc
     5941 gtggtcgtgt catgcggcgc gctcaattcg gcgaaactgc tgctgatgtc gcacaacgac
     6001 aagcacccca atgggctcgc caatggctcg gatcaggtgg ggcgcaatta catgttccac
     6061 aacagccagg ccgtgctcgc gatctcgcgc gaacccaatc cgaccgtgtt ccagaagacc
     6121 atagctctca atgatttcta cttcgggatg gagggattcg aatacccgat gggcaacatc
     6181 cagatgaccg gcaagtcgct cgcgcccatg taccggggcg agaagccgat cgagaccgcg
     6241 ctgctgccca tgggcctatt gagaaatctc gcgcgccacg ccgtcgattt ttggctcacg
     6301 accgaggacc tgcccgagcc cgacaatcgc gtcacggtgg acgagttcgg caaggtcacg
     6361 ctgacctata aacccaacaa ccaagtggct caccagaagc tgtacgacaa gctcaagtcg
     6421 atgctgactc acctgggcat gcatcatcat ttgattccgc gcaacctgta catgaagacg
     6481 gacattccgc tcgcgggctg cgcccatcag gccggcacct gccggttcgg ccgcgatccc
     6541 aagagctctg tcctcgatgt caactgcaag gcgcatcagc tcgacaacct ctatgtcgtg
     6601 gacacgagtt ttttcgtcag catcggcgcg gtcaatccgt cgctcaccgc aattgccaac
     6661 gcgatccggg tgggcgatca cctgttgcag cgactggctt gacatggcgt gagggctttg
     6721 gcgatggcaa gccgcaccga gatcggcgtg gtctatgctg ccgccgtcgc gcaaggtttg
     6781 gcgctggtga cgttccctgc cgcgagttcg atcttcacca gccccgacgg tttcggtttc
     6841 gacagcgcgc ggtacggaac gatgttcgtg ccgcaagtgg tcttcgccat cctcgcctcg
     6901 gcattcgccc cgaagctggc gcgccgatca agcttgcgcc gcgtgctgtt ggtgggattc
     6961 gccggcaaca tcgtttccat gacgctgctg gcgctgagcc ggctgctcat cggcgcgccc
     7021 gatacggcct tcgcagttct cctcttcgcc accgctgcgc tcggcttcgg cttcggcgcg
     7081 accgtgatgg cgctcaacac ctatgccgag gcgttctttc ccgcagggat cgaccgcgcg
     7141 gttctcgtcc tcaacgcgct gctcgggctg ggaaccgcgc tcgcgccggt gctggtcgcg
     7201 ctggtggtgg cgatcggcgc atggtggttg ctgccgctgc tcgtcgcatg cgccgtggtg
     7261 cttctatccg gcatcgcttt gacgcagccc ttgcatgcct ccgccgatac cgccgccggt
     7321 gaggtatcca tcggctggac caacctgccg cggcggttct ggctctatgc cgccgccgta
     7381 ttcgtctacg ggattgccga gaccctcaac ggcaactggg ccgtgctcta cctcacgacc
     7441 gagcggggcg tgtcgaccgg cggcgccgcg ttcgcgctcg ccgccttctg ggcgatggtg
     7501 acgctgggtc gcgtgctcat cgccgtgatc tcccgactcg tgcccgcgcg ctggatctat
     7561 gccgcgcttc cggtgctgct gctcttgacg tttcaggttg cgtcccgcgt gcagggccaa
     7621 acc
//
LOCUS       DATCWM010000356         5320 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_494061, whole genome shotgun sequence.
ACCESSION   DATCWM010000356 DATCWM010000000
VERSION     DATCWM010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5320)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5320)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5320
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_494061"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..332)
                     /locus_tag="VIQ50_06815"
     CDS             complement(<1..332)
                     /locus_tag="VIQ50_06815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020179578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEY9360126.1"
                     /translation="MTMRASLIPPGGPIADEPTDVAIAEREVLGSGFRPYERLRVQRA
                     GEGVETRDLLRAGAAVAVLPIDLERGEVVLIRQFRLAAQLANGRGDLVEIVAGHVESN
                     ETPREAARR"
     gene            complement(386..2023)
                     /locus_tag="VIQ50_06820"
     CDS             complement(386..2023)
                     /locus_tag="VIQ50_06820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9360127.1"
                     /translation="MEAPYDKLLEVNELSVAFRQGQHETLAVDRISFEIKKGETVALV
                     GESGSGKSVTALSVLKLLPYPSARHPSGSVRFKGQHLLHLPETEIRSVRGNDITIIFQ
                     EPMTSLNPLHTIEKQIGEILLLHRGLTGQAARERTIELLSQVGIPDPEMRLKSYPHQL
                     SGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILNLLKELQRRLGMAMLFITH
                     DLGIVRKLADTVCVMKEGKIVEKGPVERVFTAPVHPYTRALLAAEPKPDPAPVCPGAP
                     VVIETKDLKVWFPIKRGVMRRAVGYIKAVDGVTIEVRQGETLGVVGESGSGKTTLGLA
                     ILRLVSSDGPIVFLGSTIAGLTFRQMRPFRRHMQIVFQDPYGSLSPRMSVADIIEEGL
                     WVHAPNLSRAEQEQRVIRALCDVGLDPDTRFRYPHEFSGGQRQRIAVARAIVLEPTFV
                     VLDEPTSALDMLIQAQMVDLLRALQKRRNLTYMFISHDLRVVAALACRLLVMRHGKVV
                     EEGPAADVFARPKSPYTQALLAAAFNLETAPEDVVAQ"
     gene            complement(2029..3159)
                     /locus_tag="VIQ50_06825"
     CDS             complement(2029..3159)
                     /locus_tag="VIQ50_06825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9360128.1"
                     /translation="MGLGVPPEGHRLAISPLNRRRWLSFKANRRGYWAFWIFMVLFVI
                     SLFAEFIANDKPFYVRFDNKSFFPVFVTYPETAFGGEFETAADYRDPFLQKLIAEKGG
                     FMLWPPIRYSYNTHNLDLPTPAPSPPTWMLTEAQCKSVVERKGLSGCSDLEYNWLGTD
                     DQGRDVAARLIYGFRLSVLFGLALTIVSSVIGVAAGAVQGYFGGWTDLLFQRFIEIWT
                     SIPSLYLLLIISSVLVPGFFVLLGILLLFSWVSLVGLVRAEFLRGRNFEYIQAARALG
                     VSNRTIMFRHLLPNAMVATMTFLPFILSSSVMTLTALDFLGFGLPPGSPSLGEMLSQG
                     KANIQAPWLGISGFLTVATMLSLLIFIGEAVRDAFDPRKTFG"
     gene            complement(3212..4324)
                     /locus_tag="VIQ50_06830"
     CDS             complement(3212..4324)
                     /locus_tag="VIQ50_06830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin C ABC transporter permease YejB"
                     /protein_id="HEY9360129.1"
                     /translation="MTAYIIRRLLFMVPTLFGIMLVSFVVVQFAPGGPVERVIAQLSG
                     SDTGATSRISGSTGDLGARGQPGGGAAMDAMTSKYRGAQGLDPEFIKSLEKQFGFDKP
                     AYERFFLMLWNYSRFDFGKSYFRDTTVLQLIKEKLPVSISLGIWLTLLTYLISIPLGI
                     RKAVKDGSHFDVWTSGAIIIGYAIPGFLFAILLIILFAGGSFFNIFPLRGLTSDYWSQ
                     LSLPGKILDYFWHLVLPIISMGLAAFATMTLLTKNSFLDEIRKQYVLTARAKGCTERQ
                     VLYGHVFRNAMLIVIAGFPGAFVHAFFAGSLLIETIFSLDGIGLLGFESVLNRDYAVV
                     FATLYIMSLVGLVVNLLSDLAYTWVDPRIDFETREV"
     gene            complement(4616..>5320)
                     /locus_tag="VIQ50_06835"
     CDS             complement(4616..>5320)
                     /locus_tag="VIQ50_06835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007599752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9360130.1"
                     /translation="EELALLEPFRGKVPDEVFGEPFVPPVSDGSGQDRAMLRHASTLL
                     QEAGFPVKDGKRVTPQGEQISVEFLLDEPSFQPHHMPFIKNLGTLGIDATLRIVDPVQ
                     YRKRVDDFDFDLTVQRFGFSNTPGDSLRTFFSSQAAAMRGTQNLAGISDPVIDALIEK
                     IIAADSRASLTTSCRVLDRVIRSGRYWVPHWYKPSHWLAYWDVFSRPATKPRYARGAP
                     DTWWYDRDKAAKLERG"
BASE COUNT         1042 a         1638 c         1784 g          856 t
ORIGIN      
        1 cgccgcgccg cctcgcgcgg cgtttcgttc gactcgacgt ggccggcgac gatctcgacg
       61 agatcgcctc ggccgttggc gagctgcgcc gccagacgaa actggcggat gaggacgacc
      121 tcgccgcgct caaggtcgat cggcaagacg gcgacagccg ctccagcgcg cagcaggtcg
      181 cgcgtttcga cgccctcgcc cgcgcgttgc acgcgcagcc gctcgtaggg gcgaaatccg
      241 ctcccgagaa cctcgcgctc agcgatcgcc acgtcggtgg gttcatcggc gatcgggccg
      301 cccggcggga tgagggaggc gcgcattgtc atacacacgg tctcatgcac tcgtcatgcc
      361 tgggccgtgt caatggcaat aggtcctatt gcgcgaccac gtcttcgggc gccgtttcca
      421 gattgaaggc ggccgcgagc agggcctgcg tgtaggggct cttgggccgg gcgaaaacgt
      481 cggcggcggg cccctcctcc accaccttgc cgtggcgcat gaccaagagc cggcaggcga
      541 gcgccgcgac cacccgcaga tcgtgagaga tgaacatata ggtgagattg cgccgcttct
      601 gcagcgcgcg cagaaggtca accatctgcg cctggatcag catgtcgagc gcgctcgtcg
      661 gctcgtcgag gacgacgaaa gtcggctcga gcacgatagc gcgcgcgacc gcgatgcgct
      721 ggcgctggcc gccggagaat tcgtgtgggt agcgaaagcg cgtgtcggga tcgaggccga
      781 cgtcgcacag cgcacggatc acgcgctgct cttgctcggc ccggctcagg ttgggggcat
      841 gcacccacaa cccttcctcg atgatgtcgg caaccgacat gcgcggggag agcgagccgt
      901 aggggtcctg gaacacgatc tgcatgtggc ggcggaacgg ccgcatctgc cggaacgtca
      961 gccccgcgat ggtgctgccg agaaatacga tcggaccgtc ggaggagacg agccgcagga
     1021 tggcgagacc cagcgtggtt ttgcccgagc cggattcccc gaccacgccc agcgtctcgc
     1081 cttggcgcac ctcgatggtg acgccgtcga ccgccttgat gtagccgacc gcacggcgca
     1141 tgacgccgcg cttgatcggg aaccacactt tcaagtcctt ggtctcgatc acgaccggcg
     1201 cgccgggaca taccggcgcc ggatcgggct tgggctctgc cgccagcagc gcgcgggtat
     1261 agggatgcac aggcgccgta aagacccgct cgaccggacc cttttcgacg atcttgccct
     1321 ccttcatcac gcacaccgtg tccgcgagct tgcgcacgat gccgagatcg tgggtgatga
     1381 acagcatcgc catgccgagc cgccgctgca gctctttgag aaggttgaga atttgcgcct
     1441 ggacggtgac gtccagggcg gtggtcggct cgtcggcgat aagcagatcc ggctcattgg
     1501 ccagcgccat ggcgatcatc acgcgctggc gttgcccgcc ggagagctgg tggggatagc
     1561 tcttgagccg catctccgga tcgggaatgc cgacctggct gagcagctcg atggtgcgct
     1621 cgcgcgcggc ctgaccggtc aggccgcgat gcagcagcag gatctcgccg atctgcttct
     1681 cgatggtgtg tagcggattg agcgaggtca tcggctcctg gaagatgatg gtgatgtcgt
     1741 tgccgcgcac gctgcgaatt tccgtttccg gcaggtgcag caaatgctgg cccttgaagc
     1801 ggaccgagcc gctgggatgc cgcgcggacg ggtaaggcag gagcttgagc acggagagcg
     1861 cggtcaccga cttgccggag ccggattcgc cgacaagtgc cacggtctcg cccttcttga
     1921 tctcgaagga gatacggtcg accgccagcg tctcgtgctg gccctgccgg aacgcgacgg
     1981 agagttcgtt gacctcgagc agcttgtcgt agggcgcttc catcgcattc acccgaacgt
     2041 cttgcgcgga tcgaaggcgt cgcgcaccgc ctcgccgatg aagatcagga gcgaaagcat
     2101 ggtcgcgacg gtgaggaagc cggagatgcc gagccagggc gcctgaatgt tggccttgcc
     2161 ttgggagagc atctcgccga gcgagggcga gcccggcggc aggccgaaac ctaggaagtc
     2221 gagcgcggtg agcgtcatca ccgaggagga caagatgaac ggcaggaacg tcatggtggc
     2281 gaccatggcg ttgggcaaga ggtggcggaa cataatggta cgattcgaca cgccgagcgc
     2341 gcgcgcagcc tggatgtatt cgaaattgcg cccgcgcagg aactcggccc gcaccaggcc
     2401 gaccagcgat acccatgaaa acaacaacag aatcccgagc agcacgaaga agccgggcac
     2461 cagcaccgag gagatgatca gcaacagata gagcgagggg atcgaggtcc agatttcgat
     2521 gaagcgctgg aacagaagat cggtccagcc gccgaaatag ccctgcaccg cgccggcggc
     2581 gacgccgatg acggacgaga cgatggtgag cgcaagcccg aacagcacgg agaggcggaa
     2641 gccgtagatt aagcgcgccg ccacgtcgcg gccctggtcg tcagtgccga gccaattgta
     2701 ttcgagatcg ctgcagccgc tcaggccctt gcgttcgacc acgctcttgc attgcgcctc
     2761 ggtcagcatc caggtgggcg gtgacggcgc cggtgtcggc aggtcgagat tgtgggtgtt
     2821 gtaggaatag cggatcggcg gccagagcat aaagccgccc ttctcggcga tgagcttctg
     2881 caggaacgga tcgcggtagt cggccgccgt ctcgaactcg ccgccgaagg cggtttccgg
     2941 ataggtcacg aacaccggaa agaacgactt gttgtcgaag cgcacgtaaa acggcttgtc
     3001 gttggcgatg aactcggcaa acagcgaaat gacgaacagc accatgaaaa tccagaacgc
     3061 ccaatagccg cgccggttgg ccttgaagct cagccagcgc cggcgattga gcggagaaat
     3121 cgccaagcga tgtccctccg gcggaacgcc aagccccata ggcgtctgcg ccgtcgtctc
     3181 gggaacgctg atggcggtac gctcgtccag ttcacacctc ccgggtctcg aagtcgatgc
     3241 gcggatccac ccacgtatag gcgagatcag acaacaggtt caccaccaat ccgaccagcg
     3301 acatgatgta gagcgtagcg aagaccaccg cgtaatcgcg gttgagcacg ctctcgaagc
     3361 cgagcaggcc tatgccgtca agcgagaaga tggtctcaat caacagcgag ccggcaaaga
     3421 acgcatgcac aaaggcgccg gggaagccgg cgatcacgat cagcatggcg ttgcggaaca
     3481 catgcccgta gagcacttgc cgctcggtac agcctttggc gcgggcggtg agcacgtatt
     3541 gcttgcggat ctcgtcgaga aacgagttct tggtgagcag ggtcatggtg gcgaacgcgg
     3601 ccagccccat ggagatgatc ggcagcacga gatgccaaaa atagtcgagg attttccccg
     3661 gcagcgacaa ctgcgaccag tagtcggagg tcagcccgcg cagcgggaaa atgttgaaaa
     3721 acgaaccgcc ggcgaacagg atgatgagca ggatcgcgaa caggaatcct ggaatcgcgt
     3781 agccgatgat gatggcgccc gaggtccata cgtcgaagtg cgagccgtcc ttgaccgcct
     3841 tgcggatgcc gagcgggatc gagatcaggt aggtcagcag ggtgagccag atgccgagcg
     3901 agatggagac cggcagcttc tccttgatga gctggagcac cgtggtgtcg cgaaaatagg
     3961 acttgccgaa atcgaagcgc gaatagttcc acagcatgag gaagaagcgc tcgtatgccg
     4021 gcttgtcgaa gccgaactgc ttctccaggc tcttgatgaa ttccgggtcg aggccctgcg
     4081 cgccgcgata cttcgaggtc attgcgtcca tcgcggcgcc gccgccgggc tggccgcgcg
     4141 cgccgagatc gccggtcgag cccgagatgc gcgaggtggc gcccgtatcc gatcccgaaa
     4201 gttgcgcgat cacccgttcg accggcccgc cgggcgcgaa ctgcaccacc acgaacgaca
     4261 ccagcatgat accgaacaaa gtcgggacca tgaacagcag gcgccggatg atgtaggcgg
     4321 tcatgtcttg tgcgcgtccg cgcttgtgtg gcgcagccaa cacgctgcgc ccctcgttcg
     4381 ggccggccta tggtatatga accggcactg ttgcgcgatg catttactca ggccaatcaa
     4441 ccaccgcgcg tgtccggcat acggtcagcg ggcgcagacc gcgcgcgctt gactgcgcca
     4501 cccgacatcc acgccttgtt ttgtgacgca gcaaagacgc gagttggccg gggcatgcgt
     4561 accgtcgcgc gcgtcgtccg acgcgccatg cccgaccgcg accggtaaat ccgcgctatc
     4621 cgcgctcgag ttttgccgcc ttgtcgcgat cgtaccacca ggtgtcgggg gcgccgcgcg
     4681 cgtagcgcgg tttcgtcgcc ggtcggctga agacgtccca ataggcaagc cagtgcgagg
     4741 gcttgtacca gtgcggaacc caatagcggc cagagcgaat cacccggtcg agcacgcggc
     4801 atgacgtcgt gaggctggcg cggctgtcgg cggcgatgat cttttcgatc agcgcatcaa
     4861 tcaccggatc ggatatgccg gccagattct gcgtgccgcg catcgcagcg gcctgcgagg
     4921 agaagaaggt gcgcaacgag tcgcccggcg tgttggagaa gccgaaccgc tgcaccgtga
     4981 ggtcgaagtc gaaatcgtcg acgcgcttgc ggtactgcac gggatcgacg atgcgcagag
     5041 tcgcgtcgat tcccagcgtg ccgagattct tgatgaaggg catgtgatgc ggctggaacg
     5101 acggctcgtc gagcaggaac tcgacgctga tctgctcgcc ttgcggcgtg acccgcttgc
     5161 catccttgac cgggaagccc gcttcctgca gcaacgtgct ggcatggcgc agcatggcgc
     5221 ggtcctgccc ggacccgtca gagaccggcg gcacgaacgg ctcgccgaag acctcatcgg
     5281 gaaccttgcc gcggaatggc tcgagcagcg ccaactcctc
//
LOCUS       DATCWM010000357         3811 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_83779, whole genome shotgun sequence.
ACCESSION   DATCWM010000357 DATCWM010000000
VERSION     DATCWM010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3811)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3811)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3811
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83779"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     regulatory      5..205
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            241..438
                     /locus_tag="VIQ50_06840"
     CDS             241..438
                     /locus_tag="VIQ50_06840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CbtB domain-containing protein"
                     /protein_id="HEY9360131.1"
                     /translation="MNSLPTETAGAAPHAVSALTTSRAISIFAAALLGMFIVGGVGFS
                     HIMAVHNAAHDYRHSMGFPCH"
     gene            450..1157
                     /locus_tag="VIQ50_06845"
     CDS             450..1157
                     /locus_tag="VIQ50_06845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019170648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CbtA family protein"
                     /protein_id="HEY9360132.1"
                     /translation="MDYVRNIVLVAAIAGAVAGLAMTVAQQLTTVPLILKAEVYEEHG
                     ATPAAHNHGDAAQAPVHQHDEEGWSPANGFERTAFSALANILTGVGFALLLVAASELA
                     GGIRNWRQGVFWGLAGFAVFTLAPSLGLPPELPAMPAAELGARQLWWVATAASTAVAL
                     GLLVYGRSRWTVLAAIALLIAPHLIGAPQPGSYETPIPESLHHSFVVAVVLTTLLFWV
                     LLGGLAGLFRGRFLGAS"
     gene            1161..1697
                     /gene="cobU"
                     /locus_tag="VIQ50_06850"
     CDS             1161..1697
                     /gene="cobU"
                     /locus_tag="VIQ50_06850"
                     /EC_number="2.7.1.156"
                     /EC_number="2.7.7.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0043752 - adenosylcobinamide kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional adenosylcobinamide
                     kinase/adenosylcobinamide-phosphate guanylyltransferase"
                     /protein_id="HEY9360133.1"
                     /translation="MAEPDAGGRGLITLVLGGARSGKSRYAEWLITTYPQPWIYVATG
                     EARDEEMAERIAAHKARRSAGWQTVETPHELAGALRAAPNDAAVLVDCLTLWLSNLLE
                     AEADIEGETARLQDALAERAGPTVLVSNEVGLGIVPDNALARRFRDLQGNLNQRLAAQ
                     ATRVIMMVAGIAVAVKSS"
     gene            1694..2311
                     /gene="cobO"
                     /locus_tag="VIQ50_06855"
     CDS             1694..2311
                     /gene="cobO"
                     /locus_tag="VIQ50_06855"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013531120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HEY9360134.1"
                     /translation="MTKRIDEQEAERHRAKMAKRKAVQDEEVAGKKLEKGLLIVHTGT
                     GKGKSTAAFGLALRMLGRGRRIGVVQFIKGGWHSAERDAFEKFGDQVAWHSMGEGFTW
                     ETQDLARDIEAAERAWAKAQELMADPSFSLVVLDELNIALRYDYLPLDKVVAALKARR
                     PDLHVVVTGRNAKPALIDAADLVTDMMLVKHHFAAGVKAQEGIEF"
     gene            2315..3775
                     /locus_tag="VIQ50_06860"
     CDS             2315..3775
                     /locus_tag="VIQ50_06860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020809838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobyric acid synthase"
                     /protein_id="HEY9360135.1"
                     /translation="MAARVLMFQGTGSDVGKSLIVAGLCRLLYKRGLKVAPFKPQNMS
                     NNAAVTEDGGEIGRAQALQARAAGMPPSVHMNPVLLKPQSEVGAQVVVQGKVYGRATA
                     AEFQKAKPELMPFVLDSFAKLKAEADIVFAEGAGSASEINLRANDIANMGFARAADVP
                     VVLIGDIDRGGVIASLAGTKAVIDAGDAALIKGFLVNKFRGDPELFASGMALIAEATG
                     WEALGLIPFFPDARLLPAEDALALSAERPAKPDARIKIAVPLLPHIANFDDLDPLDAE
                     PAVDLVKVKPGAALPGNANLIILPGSKATIADLAALRDAGFDIDIVAHLRRGGSVLGL
                     CGGYQMLGRTINDPEGIEGAPGSARGLGLLDVETTLSVEKRLEKIEGASFDGAALAGY
                     EMHIGVTEGPDRARPFAKFADGSSEGAMAADGRVFGTYIHGLFADDRQRAAWLARFLA
                     GAPSIAYDTLIDETLDSLAAHLEAHVDVEQLLTLAR"
BASE COUNT          680 a         1191 c         1267 g          673 t
ORIGIN      
        1 agctatagtc gcgggcgtcg tcggttcccg cgtggtgcgg gacgaaaaag ggaacgcggt
       61 gagggtgatc cccaatgccg cggctgcccc cgcaactgta agcggcgagc ttccctccac
      121 ctgccactgg agcttcgctc cgggaaggcc gaggaaaagc caagacccgc gagccacaag
      181 acctgccggc ggcgtcaacg ctagcccgcg ccctcgggtg gagggcgaaa agggggtcac
      241 atgaattctc taccgaccga aactgccggc gccgcgccgc acgctgtcag tgcgctcacc
      301 acctcacgcg ccatttcgat cttcgccgcc gctctgctcg ggatgttcat cgttggcggg
      361 gttggcttct cgcacatcat ggcagtgcat aacgccgcgc atgactatcg ccattccatg
      421 ggcttcccct gccactaggg aggcgcgcca tggactatgt ccgcaacatc gtgctcgttg
      481 ccgcgatcgc cggtgcggtc gccggactag cgatgacggt agcccagcag ctcaccaccg
      541 tcccgctcat cctcaaggcc gaggtctatg aggagcatgg cgctacacct gcggcacaca
      601 atcacggcga tgccgcgcaa gcaccagttc accaacatga tgaggagggc tggtcgccgg
      661 ccaatggctt cgagcgcacg gcgttttctg ctcttgccaa tatcctaacg ggtgtgggct
      721 ttgccctgct acttgtcgcc gcgagcgagc ttgccggcgg catcaggaac tggcgccagg
      781 gcgtgttctg ggggcttgcc ggtttcgctg tgttcacgct cgctccaagt cttgggcttc
      841 cgccagagct cccggccatg cccgcggcag agcttggcgc gcgccaactg tggtgggtcg
      901 cgacggcggc ctctacggcc gttgctctcg gccttctggt ttatggccgc tcgcgatgga
      961 ccgtgctcgc tgcaattgct cttctgatcg cgccgcactt gatcggcgcg ccgcaacccg
     1021 gaagctacga gacgccgatc cccgaaagcc tgcatcacag cttcgtcgtt gccgtggtgc
     1081 taacgacgct gctgttttgg gtactgctcg ggggcctcgc cgggttgttc cgaggccgtt
     1141 tcctcggcgc aagctgagcc atggcagaac ctgatgccgg cgggcgcggg ctcatcacgc
     1201 tcgtgctcgg cggcgcccgg tcaggcaaga gccgctatgc cgagtggctg atcacgacct
     1261 atccgcagcc gtggatctat gtggcgacag gcgaggcgag ggacgaggag atggccgagc
     1321 gaatcgcggc gcataaggca agacgcagtg ccggatggca aaccgtcgaa acgccacacg
     1381 aacttgccgg tgcgcttcgc gcagcaccga acgatgcggc agtcctggtt gactgcctca
     1441 cgctgtggct ctcgaatttg ctggaggctg aggccgacat cgaaggcgag acggcgagac
     1501 ttcaggacgc attggccgaa cgggccgggc ctactgtgct cgtctcgaac gaggttggcc
     1561 tcggcatcgt gcctgacaat gcgctggccc gcaggttccg cgacctacag ggcaatctca
     1621 atcaaaggct ggcggcgcag gcgacacgcg tgatcatgat ggtggcaggt atcgcggtcg
     1681 cggtgaaaag ctcatgacca aacgaatcga cgagcaggag gccgagcgcc atcgcgccaa
     1741 gatggcaaag cgcaaggcag tgcaggacga ggaggtcgcc ggcaagaagc tcgaaaaggg
     1801 cctgctcatc gtccacaccg gcactggcaa gggcaaatcg acggcagcct tcggcttagc
     1861 actccgcatg ctcggacggg gcaggcgcat tggggtggtg cagttcatca aagggggctg
     1921 gcacagcgcc gagcgcgatg cgttcgagaa attcggcgac caggtggcgt ggcattcgat
     1981 gggcgagggc ttcacctggg agacgcagga cctcgcccgc gacatcgaag cagccgagcg
     2041 cgcctgggcc aaggcgcaag agctgatggc tgacccgagc ttttcgctgg tggttctcga
     2101 tgagctcaat atcgcgctcc gctacgacta tcttcctctg gacaaagtgg ttgcagctct
     2161 gaaggcgcgg cggcccgatc tgcatgtcgt ggtcaccggg cgaaatgcca aacctgcgct
     2221 gatcgacgcg gcggatctcg tcaccgacat gatgctagtg aagcatcact tcgctgctgg
     2281 cgtgaaggct caagaaggca tcgagttcta aagcgtggcc gcgcgcgtgc tcatgttcca
     2341 aggcaccggc tcggacgtcg gcaagtcgtt gatcgtcgcc gggctgtgcc gcttgcttta
     2401 caagcgcggg cttaaagtcg cgccgtttaa gccgcagaac atgtcgaaca atgcggcagt
     2461 gacggaggat ggcggcgaga tcggccgcgc gcaggcgcta caggcgcgcg ccgcaggcat
     2521 gccgccctcg gtgcatatga acccggttct gctcaagccg caaagcgaag tcggcgcgca
     2581 agtcgtggta cagggcaagg tctatggccg ggcgaccgcc gccgagttcc agaaggcaaa
     2641 gccagagctg atgccgttcg tgctggacag cttcgcgaag ctgaaggccg aggccgacat
     2701 cgtgtttgcc gagggcgccg gcagcgcgtc ggagatcaac ctccgggcca acgacatcgc
     2761 taatatgggc ttcgcgcggg cggcagatgt gccagtggtg ctgatcggcg acatcgaccg
     2821 cggcggcgtg atcgcttcgc tcgccggcac caaggcagta atcgatgccg gcgacgcggc
     2881 tttgatcaaa ggcttcctcg tcaacaagtt tcgcggagat cctgagctct ttgccagcgg
     2941 catggcgctg atcgccgagg cgaccggctg ggaggcgctc ggcctcattc catttttccc
     3001 cgacgcgcgg ctgttgccgg ccgaagatgc gctcgcgctc tcggccgagc gtccagcgaa
     3061 gccagatgcg cgcatcaaga ttgccgttcc gctgctgccg catatcgcaa atttcgacga
     3121 tctcgacccg ctcgatgcgg agcctgcggt cgatctcgtc aaagtgaagc ctggcgcagc
     3181 gctgccgggc aacgccaacc tcatcatctt gcccggttcg aaggcgacca tcgccgatct
     3241 cgcggcgctg cgtgacgcgg gcttcgacat cgatatcgtt gcccatcttc gccgcggcgg
     3301 cagcgtgctc ggtctgtgcg gcggctatca gatgctcggc cgcactatca acgatccaga
     3361 gggaatcgag ggtgcgccgg ggagtgcccg cgggctcggc ctgctcgacg tggagaccac
     3421 gctctcggtc gagaagcggc tggagaagat cgaaggcgca agcttcgacg gcgccgcact
     3481 cgcaggctac gagatgcata tcggcgtgac cgaagggcct gaccgcgcgc gaccctttgc
     3541 caagtttgcc gacggctcgt ccgaaggcgc gatggcggcc gacggccgcg tgttcggcac
     3601 gtatatccac ggcctttttg ccgacgaccg ccagcgtgcg gcttggcttg cgcgtttctt
     3661 ggctggggcg ccgagcatcg cctacgatac tttgatcgat gaaacgctcg acagcctcgc
     3721 ggctcatctc gaagcgcatg tcgatgtcga gcagctgctc acgctagcgc gatgagggct
     3781 gctacgagag cgacaatcgc gataaggatg g
//
LOCUS       DATCWM010000358         4776 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_116257, whole genome shotgun sequence.
ACCESSION   DATCWM010000358 DATCWM010000000
VERSION     DATCWM010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4776)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4776)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4776
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116257"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..465)
                     /locus_tag="VIQ50_06865"
     CDS             complement(<1..465)
                     /locus_tag="VIQ50_06865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012047103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEY9360136.1"
                     /translation="MSLRIVFMGTPDFAVPTLLEIVGRGHDVVAVYTRAPKPAGRRGL
                     DPTPSPIEKEARRFGLPLLTPATLRTAEAAGAARAHGADVAVVVAYGLILPKAVLEDF
                     PLGAFNLHASLLPRWRGAAPINRAIMAGDSETGVMVMKMEEGLDSGPVAMAER"
     gene            complement(546..1073)
                     /locus_tag="VIQ50_06870"
     CDS             complement(546..1073)
                     /locus_tag="VIQ50_06870"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEY9360137.1"
                     /translation="MALRDILTLPDKRLRQVSDPVKKIDAGVRKLVEDMFETMYDAPG
                     IGLAAIQVGAPKRIITLDLAKKEEPRKPQVFVNPEILWTSEEKATHEEGCLSIPEFYD
                     DVERPAQVKVKYLDLEGKPQEVLANGLLATCLQHEIDHLNGVLFIDHLSRLKRDRVLK
                     KFSKAAKRAAVQIED"
     gene            1222..2352
                     /gene="rmuC"
                     /locus_tag="VIQ50_06875"
     CDS             1222..2352
                     /gene="rmuC"
                     /locus_tag="VIQ50_06875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HEY9360138.1"
                     /translation="MTDHLLPLAGAIAFAGLLAVVAFAAVAVRALRRRDAQTADKQLL
                     ELARLQAETAVRIEAMRDVLAGRQAELHRAVNERLDSVTHHLNQSMTTTSQHTVESLQ
                     KLNERLAVIDNAQRNIADLASQMTSLQSVLANKQQRGAFGQARMELIVQDGLPKGCYE
                     FQFTLSNKCRPDCAVFLPDRRPLAIDAKFPLEAVTALREAKTEDERKQAAARIRQDVT
                     RHVESIAAKYLIAGETHDLALMFVPSESIFAELHDGFDDIVQKAFRAKVVIVSPSLLM
                     LAIQVIQQIQKDARMREAADQIHAEVGHLMDDLKRLHERVLKLQQHFGQANEDVRQIL
                     VSAEKIEKRGTRIREVEFEGDNLGTDAVVIRAPLPRRLQTGG"
     gene            2435..3814
                     /locus_tag="VIQ50_06880"
     CDS             2435..3814
                     /locus_tag="VIQ50_06880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9360139.1"
                     /translation="MTVTPETATARPSFADTLAVYLKPRVLVVLFLGFSAGLPLALSS
                     STLLIWMREAGVDLGVIGLFALVGTPYTIKFLWAPVVDALDVPVLSPLFGRRRGWLLF
                     SQFLLIISIALLAFCDPAVAPWYVVFSAAVFVATASATQDIVIDAFRIESLSESEQAA
                     GMAAYVAAYRLGMLASTAGALFLVSGFESGLGFGKEASWTAGYLVMAALVVIGIATAL
                     IAREPEKSALAAAEHATHARENPLVRVATAAYASFGEFLTRDMAVVILVFVVLYKLCD
                     AFAGAMTAPFVIDLGFSRNDYAAIVKGVGLAATLIGGFAGGAIARVYPLATSLWIGAF
                     LQMASNLIFTWQAFVGVNLWALTLTIIVENFTGAIGTVIFVAYLSALCNNPLHTATQY
                     ALLTALAAVGRTYLSAGAGFIAERAGWPLFFIISALTALPSLVLLVWLQQRGHFAGLV
                     KPTRIVMDD"
     gene            complement(3811..4416)
                     /gene="recR"
                     /locus_tag="VIQ50_06885"
     CDS             complement(3811..4416)
                     /gene="recR"
                     /locus_tag="VIQ50_06885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HEY9360140.1"
                     /translation="MSTAAAGPEIERLISLLARLPGLGPRSARRAALFLIKKREQIMA
                     PLATAIQTALEKIEVCRVCGNIDTQNPCTVCTDTRRDPAIIVVVADVADLWALERARA
                     INARYHVLGGTLSPLDGIGPQDLSIDALVSRAHDPAVTEVILALNATVDGQTTAHYIT
                     DLLHEANVKVTRLAHGVPVGGELDYLDEGTLAAAIRQRTAF"
     gene            complement(4447..4689)
                     /locus_tag="VIQ50_06890"
     CDS             complement(4447..4689)
                     /locus_tag="VIQ50_06890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360141.1"
                     /translation="MEKDIDMQAVSAAIAGFLACHVLTCRFLAQEGVVDRDRFTAYLE
                     TAMAEMAPGIEDQRALFGLRQLIAALRAPLTSPPMQ"
BASE COUNT          819 a         1571 c         1490 g          896 t
ORIGIN      
        1 gcgctccgcc atggcgacgg ggccgctatc taatccttcc tccattttca tcaccatcac
       61 gccggtctcc gaatctcccg ccatgatcgc gcggttgatc ggcgcggcgc cgcgccagcg
      121 gggcaacagc gaggcgtgca ggttgaatgc gcccaaagga aaatcctcga ggaccgcctt
      181 gggcaggatc aaaccatagg cgacgacgac cgccacatcc gcgccgtgcg cgcgcgcggc
      241 gcctgccgcc tccgccgtgc gcaacgtcgc cggcgtgagc aacggcaggc cgaaacggcg
      301 cgcctccttt tcgatcggac tcggcgtggg atcgaggccg cggcgcccgg ccggcttcgg
      361 cgcgcgggta tagaccgcga cgacatcatg gccgcgaccg acaatctcga gcagggtcgg
      421 tacggcaaaa tcgggcgtgc ccatgaacac gatgcgcagc gacatgtcac gtcaccccgg
      481 gcgatctccg tggccgagca acagctgacc gtgtacgaga tttcacgccc gctgcaggaa
      541 gaccgtcagt cctcgatttg aaccgcggcc cgcttcgccg ccttgctgaa ttttttgagc
      601 acgcggtcgc gtttgagcct ggacaaatga tcgatgaaca agacaccgtt caggtgatcg
      661 atttcatgct gcaggcaggt ggccaacagt ccattcgcca gaacctcctg cggctttccc
      721 tcgagatcga gatacttcac cttgacctgc gccggacgtt cgacgtcgtc ataaaattcc
      781 gggatcgaca ggcacccttc ctcgtgggtt gccttttctt ccgaggtcca aaggatttcc
      841 ggattgacga agacctgcgg tttccttggc tcctccttct tggcgagatc cagggtgatg
      901 atccgcttgg gcgcgccgac ctgaatggcg gcgagtccga taccgggcgc gtcgtacatg
      961 gtctcgaaca tgtcctcgac aagcttgcgc accccggcgt cgattttctt caccgggtcg
     1021 gaaacctgcc gtagccgttt gtccggcagg gtgaggatgt cgcggagcgc catgctcgcg
     1081 atgtaagcgg tcgccggaaa tcggtcaatg cgccgcatcc gctgcggtga tcggccgggt
     1141 cggctttggc ggccgcgcca tgggattgct ttgtcgttca tattttgttc tcatgccgcg
     1201 aatcgaggta cagtggcgcc gatgaccgat catctcctcc ctctcgccgg cgcgattgcg
     1261 tttgcggggc tactggccgt tgtcgccttc gccgcagtcg ccgtccgagc gctgcgccgg
     1321 cgcgatgcgc aaaccgccga caagcaactg ctcgaactcg cgcggctgca ggcggagacc
     1381 gcggtgcgca tcgaggcgat gcgcgacgtg ctcgccggcc gccaagcgga gcttcaccgc
     1441 gcggtgaacg agcggctcga ctcggtcacg caccatctca atcagtccat gaccacgacc
     1501 agccagcata cggtcgagag cctgcaaaag ctcaacgagc ggctcgcggt catcgacaac
     1561 gcgcagcgaa acatcgccga tctcgcttcg cagatgacct cgctgcaaag cgtgctcgcc
     1621 aacaaacagc agcgcggcgc gttcgggcaa gcacgcatgg aattgatcgt ccaggacggc
     1681 ctgcccaagg gctgctacga attccagttc acgctatcga acaaatgccg tcccgattgt
     1741 gcggtgttcc ttcccgatcg ccgtccgctg gcgatcgacg ccaagtttcc gctcgaagcc
     1801 gtcaccgccc tgcgcgaagc caagaccgag gacgagcgca agcaagcggc tgcgcgcata
     1861 cggcaggatg ttacaagaca cgtcgagagc atcgccgcca aatatctgat tgcgggcgag
     1921 acccacgact tggcgctgat gttcgtgccc tccgaatcca tcttcgccga attgcatgac
     1981 ggcttcgatg acatcgtgca aaaggcgttc cgcgccaagg tcgtcatcgt ctcgccctcg
     2041 ctgctgatgc tcgccatcca ggtcattcag caaatccaaa aagatgcacg gatgcgcgag
     2101 gccgccgacc agattcacgc ggaggtcggc catctcatgg acgacctcaa acggctgcac
     2161 gagcgggtgc tgaaactgca gcagcatttc gggcaggcca acgaggacgt gcggcaaatc
     2221 ctggtttcgg cggaaaagat cgagaagcgg ggaacccgca tccgcgaggt cgagttcgag
     2281 ggcgacaatc tcggcaccga tgccgtcgtc attcgtgccc cgctgccgcg ccggctgcaa
     2341 accgggggat aatcggcagg cgctttgcca tcacttttgc cgcaatcgca cggcaagcat
     2401 ggtccgcgcc ctaattcaac gatagctgcc gctgatgacc gtcacgcccg aaaccgcgac
     2461 cgcgcgcccg agctttgccg acacgctggc ggtttacctc aagccgcgcg tgttggtcgt
     2521 gctcttcctg ggcttctccg ccggcctgcc gctcgcgctg tcgagctcga cccttctgat
     2581 ctggatgcgg gaagccggcg tcgatctcgg cgtgatcggg ttgttcgcgc tcgtcggcac
     2641 gccctacacc atcaagttcc tgtgggcgcc ggtcgtcgac gcgctcgacg tgccggtgct
     2701 ttcgccgctg ttcgggaggc gacgcggctg gctgttgttc tcgcagtttc tgctgatcat
     2761 ttcgatcgcg ctgctcgcct tctgcgatcc cgcggtggcg ccgtggtacg tcgtgttcag
     2821 cgccgccgtc ttcgtcgcca cggcctccgc cacgcaggac atcgtcatcg acgcattccg
     2881 catcgaaagc ctctcggaaa gcgagcaggc cgcgggcatg gccgcctatg tcgcggctta
     2941 tcggctgggc atgctggcct cgactgccgg cgcgctgttt ctggtgagcg ggtttgaatc
     3001 gggcctcggc ttcggcaagg aggcgtcctg gaccgcaggc tacttggtga tggcggcgct
     3061 ggtcgtgatc ggcatcgcca ccgcgctgat cgctcgcgaa cccgagaaat ccgccctcgc
     3121 cgcggccgag cacgccacgc atgcacggga gaatccgctc gtgcgcgtcg ccaccgcagc
     3181 ctatgccagc tttggcgagt ttctcacgcg cgacatggcc gtcgtcattc tggttttcgt
     3241 cgtgctttac aagctctgcg acgcattcgc cggcgccatg accgcgccat tcgtcatcga
     3301 tctcggattt tcccgcaatg actatgccgc catcgtcaag ggcgtcggtc tggcggcaac
     3361 gttgatcggc gggtttgccg gcggggcgat cgcgcgcgtc tatccgcttg ccacgagcct
     3421 ctggatcggc gcgtttctgc agatggcttc gaacctgatc ttcacctggc aggcatttgt
     3481 cggcgtcaat ctttgggcac tgacgctcac gatcatcgtg gaaaacttca ccggcgccat
     3541 cggcaccgtg atcttcgtcg cttacctctc ggcgctgtgc aacaatccac tgcatacggc
     3601 gacgcagtac gcgctgctca cggcgcttgc cgccgtcggg cgcacctatc tatccgccgg
     3661 ggcgggtttc atcgccgagc gcgcggggtg gccattgttc ttcatcatca gcgcgctcac
     3721 ggcgctgccg agcctggtgc tgctcgtttg gctgcagcaa cgcgggcatt ttgccggcct
     3781 cgtcaagccg acccgcatcg tcatggacga ttaaaacgcg gtgcgctgcc ggattgccgc
     3841 cgcgagcgtg ccctcgtcga gatagtcgag ctcgccgccg accggcacgc cgtgggcaag
     3901 gcgcgttacc ttgacattgg cctcgtgcag gaggtcggtg atgtaatgcg ccgtggtctg
     3961 cccgtcgacc gtggcgttga gcgcgaggat cacctcggtc acagccggat cgtgggcgcg
     4021 cgacaccagc gcgtcaattg aaaggtcttg cggaccgatg ccatcgagcg gcgagagcgt
     4081 gccgcccagc acgtgatacc gggcgttgat cgctcgcgcg cgctcgagcg cccaaaggtc
     4141 ggccacgtcc gcaactacga cgatgatcgc gggatcgcgc cgcgtgtcgg tgcacaccgt
     4201 gcacgggttc tgggtatcga tattgccgca cacgcggcag acttcgattt tttccagcgc
     4261 cgtctgaata gcggtggcga gaggcgccat gatttgttcg cgcttcttga tgagaaagag
     4321 cgccgcgcgg cgtgccgagc gagggccgag gccgggcagg cgcgcgagca gggagatcag
     4381 acgctcgatc tcgggtccag cggcggcggt ggacatcagg agacggacag cgaccggcgc
     4441 gagaagttac tgcatgggcg gcgacgtcag cggcgcgcgc agcgccgcaa tcaattgacg
     4501 caacccgaac aacgcgcgct ggtcctcgat gccgggagcc atctccgcca tcgcggtctc
     4561 gagataagcc gtgaagcggt ctctatcgac cactccctcc tgcgccagga agcgacaggt
     4621 cagcacgtga caggccaaga accccgcgat cgcagccgac acagcctgca tgtcgatatc
     4681 tttttccacg gacaacctcc atccgccgct attccgccga atctgccagc ggtcagacgg
     4741 tgttcaaaac aacttcattc ccggcggcag cggcag
//
LOCUS       DATCWM010000359         4883 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_488580, whole genome shotgun sequence.
ACCESSION   DATCWM010000359 DATCWM010000000
VERSION     DATCWM010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4883)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4883)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4883
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_488580"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1264)
                     /locus_tag="VIQ50_06895"
     CDS             complement(<1..1264)
                     /locus_tag="VIQ50_06895"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HEY9360142.1"
                     /translation="MSWPILSVTTFLPLVGALFIMLMHSDGEAEKRNARWIALWTTLI
                     TFAISLILLYRFDPASPEFQFVEKRPWLAGAITYHMGVDGISLPFLILTTALMPVCII
                     ASWLPIQHRVKEYMVAFLVLETLMVGTFAALDLVLFYLFFEGGLIPMFLIIGVWGGPR
                     RVYASFKFFLYTFLGSVLMLLAIMAMYWEAGTTEIPALLQHGFPRGLQTWAWLAFLAS
                     FAVKLPMWPLHTWLPDAHVEAPTAGSVILAAILLKMGGYGFLRFSLPMFPAASHDLAP
                     LVFALSVVAVIYTSLVALAQEDMKKLIAYSSVAHMGFVTMGIFAATAQGVAGGIFQMI
                     SHGIVSAALFLCVGVVYDRMHTREIAAYGGLVNRMPLYAAAFMVFTLANLGLPGTTGF
                     IGEFLTLIGTFRINTWVATLVTTGTILSA"
     gene            complement(1267..3366)
                     /gene="nuoL"
                     /locus_tag="VIQ50_06900"
     CDS             complement(1267..3366)
                     /gene="nuoL"
                     /locus_tag="VIQ50_06900"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007610977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HEY9360143.1"
                     /translation="MYYAIVFLPLLGAVIAALIALAGARARHPGGPPDVGVETHAHGP
                     VDESRPRGAPDPQEAHAVLDASHTEPQPAEPPAAGSRSAEAVTTVFLFAAMLLSWLAF
                     VDVGFGHHDARVTLFPWIVVGDLKVDWALRVDTLTAVMLVVVTTISAFVHLYSIGYME
                     DDPYRPRFFSYLSLFTFAMLMLVTADNLVQLFFGWEGVGLMSYLLIGFWYYKPEANAA
                     AIKAFIVNRVGDFGFSLGIFATFMMTGAIDLDTVFAQAPALTGKTIHFLSWNVDALTL
                     ICLLLFMGAMGKSAQFLLHTWLPDAMEGPTPVSALIHAATMVTAGVFMVARLSPLFDL
                     APSAQAFVTFIGGTTAFFAATIALVQNDIKRIVAYSTCSQLGYMFVAMGTGAYSVGMF
                     HLFTHAFFKALLFLGCGSVIIAMHHEQDIRNMGGLKNKLPLTYWTMVIGTLALTGFPL
                     TAGYFSKDAIIEAAYVSGNPMALYAFGTTALAAALTAFYSWRLIFLTFHGAPHDQHHY
                     DAARESPLVMVLPLVFLATGAIFAGYPFRELFVGHDVTEFFGDSLKFASGAHVFEAMH
                     AIPQLIAMTPTLMMAIGFAIAWEFYIRRPELPVELARQQEPLYKFLLNKWYFDEIYDF
                     LIVRPTLWLARVLWKYGDGWTIDGLGPDGVSARVLDVTRGVMRLQTGYLYHYAFAMLI
                     GVAALITWFMFGGARVG"
     gene            complement(3374..3682)
                     /gene="nuoK"
                     /locus_tag="VIQ50_06905"
     CDS             complement(3374..3682)
                     /gene="nuoK"
                     /locus_tag="VIQ50_06905"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HEY9360144.1"
                     /translation="MTIGLGHYLTVAAILFTIGIFGIFLNRKNVIIILMSIELILLAV
                     NINLVAFSAFLGDLVGQVYALLVLTVAAAEAAIGLAILVAYYRNRGSIAVEDINLMKG
                     "
     gene            complement(3703..4317)
                     /locus_tag="VIQ50_06910"
     CDS             complement(3703..4317)
                     /locus_tag="VIQ50_06910"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013652821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HEY9360145.1"
                     /translation="MIFPALFFYLFSGVCIAAAVMVVASRNPVHSVLFLILAFVNAAA
                     LFILLGAEFLAMILIIVYVGAVLVLFLFVVMMLDVDFAELRQGFLQYLPIGALLGGIL
                     LIELVLVLVGWTIAPGARQTIAAPIPPPASMLNAEALGHVLYTRYVYFFQAAGVVLLV
                     AMIGAIVLTLRHKPYVKRQSIAEQIARTKASAIEIVKVRPGQGL"
     gene            complement(4327..4815)
                     /gene="nuoI"
                     /locus_tag="VIQ50_06915"
     CDS             complement(4327..4815)
                     /gene="nuoI"
                     /locus_tag="VIQ50_06915"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HEY9360146.1"
                     /translation="MKLDQAARALFLREFASAFVLAMRYFFKPKPTLNYPFEKGQLSP
                     RFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAGPRRNDGTRRTTRYDIDMVKC
                     IYCGLCQEACPVDAIVEGPNFEFATETREELYFDKERLLANGDRWEREIAQNIALDAP
                     YR"
BASE COUNT         1094 a         1444 c         1597 g          748 t
ORIGIN      
        1 ccgccgagag gatggttccg gtggtcacca gcgtcgccac ccaggtattg atgcggaacg
       61 tgccgatgag ggtgaggaat tccccgatga aaccggtggt gccgggcagc cccaagttgg
      121 caagcgtgaa caccatgaag gcggcggcgt agagcggcat gcggttgacg aggccgccgt
      181 aggcagcgat ttcgcgggta tgcatgcgat cgtagacgac ccccacgcac aggaacaaag
      241 ccgcggacac aatcccgtgg gaaatcatct ggaagatgcc gcccgccacg ccctgcgcgg
      301 tcgcggcaaa aatgcccata gtcacgaagc ccatgtgggc gaccgaggaa taggcgatga
      361 gcttcttcat gtcctcctgc gccagcgcga ccagcgaggt gtaaatcacc gccaccaccg
      421 atagcgcgaa gacgagcggg gcgagatcgt gcgaggcggc cgggaacatc ggcagcgaga
      481 accgcaagaa gccgtagccg cccatcttca acagaatggc ggcaaggatg accgagcccg
      541 cggtcggcgc ctcgacgtgc gcgtctggca accaggtgtg cagcggccac atcggcagtt
      601 tcaccgcgaa agaggcgaga aacgcgagcc atgcccaggt ctgcaggccg cgcgggaaac
      661 cgtgttgcag gagcgcgggg atctcggtcg tccccgcctc ccagtacatc gccatgatgg
      721 cgagcagcat cagcacggac ccgaggaagg tatagagaaa gaacttgaag ctggcgtaga
      781 cgcggcgggg gccgccccat acgccgatga tcaggaacat cgggatgagg ccgccctcga
      841 agaacaggta gaacaggaca aggtcgagcg cagcgaatgt accgaccatc agcgtctcga
      901 gcaccaagaa cgcgaccatg tattccttga cgcggtgctg gatcggcagc cagctggcga
      961 tgatgcacac cggcatcagt gcggtggtga ggatgaggaa cggcagcgag atgccgtcga
     1021 cgcccatgtg ataggtgata gcgcccgcga gccaagggcg cttctcgacg aactggaact
     1081 cgggcgacgc aggatcgaag cggtagagca ggatcagcga gatcgcaaac gtgatcaggg
     1141 tggtccacaa cgcgatccag cgcgcgttgc gtttctccgc ctcgccgtcg ctgtgcatca
     1201 gcatgatgaa cagcgcaccg accagcggca ggaaagtcgt gacggagagg atcggccagc
     1261 tcatcgtcac cccacccgcg cgccgccgaa catgaaccag gtgatcagcg cagcgacgcc
     1321 gatcaacatg gcgaaggcat agtgatagag atatcccgtc tgcagccgca tgacgccgcg
     1381 ggtcacgtcg agcacgcgcg ccgacacgcc gtcgggcccc agaccgtcga tggtccagcc
     1441 gtcgccgtac ttccacagca cgcgagccag ccacaaagtc gggcgaacga tgaggaaatc
     1501 gtagatctcg tcgaaatacc acttgttgag taggaacttg tacagcggct cctgctgtcg
     1561 ggcgagctcg accggcagct ccggcctgcg aatgtagaac tcccaggcga tagcgaagcc
     1621 gatcgccatc atcagcgtcg gagtcatcgc gatgagctga ggtatggcgt gcattgcctc
     1681 gaagacatgg gcacccgaag cgaatttgag cgagtcgccg aagaactccg tgacgtcgtg
     1741 acccacgaac aattcgcgga acggatagcc ggcgaagatc gcgccggtgg cgagaaagac
     1801 gagcggaagc accatcacca gcgggctctc gcgcgccgcg tcatagtgat gctggtcgtg
     1861 cggagcgcca tggaaggtca ggaagatcag gcgccaggag tagaatgcgg tcagcgccgc
     1921 cgcgagggcg gtcgtgccga aggcgtagag tgccatcgga ttgccactca cgtaagcggc
     1981 ctcgatgatc gcgtccttgg aaaaatatcc ggcagtgagg ggaaagccgg tcaatgccag
     2041 cgtgccgatc accatcgtcc agtaggtgag cgggagcttg tttttgaggc cgcccatgtt
     2101 gcggatgtcc tgctcgtgat gcatggcaat gatcaccgag ccgcaaccga ggaacagcag
     2161 cgccttgaag aaggcatgcg tgaataagtg gaacatgccg accgagtagg cgcccgtgcc
     2221 catggcgacg aacatgtagc cgagctgcga gcaggtcgag taggcgacga tgcgtttgat
     2281 gtcgttctgc accagcgcga tggtggcggc gaagaacgcg gtggtcccgc cgatgaaggt
     2341 gacgaaggct tgcgcgctcg gcgccagatc gaacagcggc gaaagcctcg ccaccatgaa
     2401 cacgccagcc gtcaccatcg tggcggcatg aatgagcgcc gataccgggg ttggtccctc
     2461 catcgcgtcc ggtaaccacg tatgcagcag gaactgcgcc gatttgccca tggcccccat
     2521 gaacagcagc aggcagatca gcgtcagcgc gtccacgttc caggacagga aatgaatggt
     2581 cttgccggtg agtgcgggcg cctgcgcgaa gacggtatcc agatcgatcg cgccggtcat
     2641 catgaacgtc gcgaaaattc caagcgagaa gccgaaatca cccacgcgat tgacgatgaa
     2701 ggctttgatc gcggcggcat tcgcttccgg cttgtaatac cagaagccaa tgagcaggta
     2761 gctcatcaag ccgacccctt cccagccgaa aaacagttgc acgaggttgt cggcagtcac
     2821 cagcatcagc atggcgaagg tgaacaacga cagataggag aagaagcgcg gccggtatgg
     2881 gtcgtcctcc atgtaaccga tggaatagag gtggacgaac gcggagatgg tggtcacgac
     2941 gacgagcatg accgccgtga gcgtgtcgac gcgcagcgcc cagtcgactt tgaggtcgcc
     3001 cacgacgatc cagggaaaga gcgtcacccg ggcgtcgtga tggccaaacc cgacgtcgac
     3061 aaaggccaac cacgacagca gcatggcggc gaacaggaat acggtggtga cggcttcggc
     3121 ggaacgcgat cccgcggccg gtggctcggc cggttgtggc tccgtgtggg aggcatcgag
     3181 aacggcatgc gcctcctgcg ggtccggcgc gccgcgcgga cggctctcgt cgactgggcc
     3241 gtgcgcatga gtctcgacgc cgacatccgg cggtccaccg ggatgacggg cgcgcgcacc
     3301 ggcaagcgca atgagggcgg cgatgacagc gccgaggaga ggcagaaaga cgatcgcgta
     3361 atacattccg ccctcagccc ttcatcagat tgatgtcctc gaccgcgatc gagccgcgat
     3421 tgcggtagta ggcgaccaga atggcaagcc cgatcgctgc ctccgccgcc gcaacggtga
     3481 ggaccagcaa cgcgtagacc tggccgacga gatcaccgag gaaggcggaa aaagccacga
     3541 gattgatgtt gacagcgagc aggatcaatt cgatcgacat caggatgata atcacgttct
     3601 tgcggttgag gaaaatgccg aagatgccga tcgtgaacag gatcgcggcg accgtgagat
     3661 agtgaccgag gccgatggtc atttcatttc ctacgggttt ctctagaggc cctggcccgg
     3721 ccggactttg acgatctcga tggcgctcgc cttggtgcgt gcgatctgct cggcgatgct
     3781 ctgccgtttg acgtaaggct tgtgccgcag cgtcaacacg atcgctccga tcatggcgac
     3841 caacagcacc acgcccgctg cctggaagaa atagacgtag cgcgtgtaga gcacgtgacc
     3901 gagcgcttca gcgttgagca tgcttgcggg gggcggaatt ggcgccgcga tggtctgacg
     3961 cgcgccggga gcgatggtcc agccgaccag gaccaacacg agctcgatca acagaatgcc
     4021 gccgagcaag gcgccgatcg gcaaatactg gagaaaacct tgccgcagct cggcaaaatc
     4081 gacgtccagc atcatcacca cgaacaggaa caacaccagg accgcgccga catagacaat
     4141 gatgaggatc atcgccaaga attctgcgcc cagcaggatg aacagcgcgg cggcgtttac
     4201 gaaggcgaga atgagaaaca gcaccgaatg tacgggattc ctcgatgcaa ccaccatgac
     4261 cgcggcggcg atgcacacgc cggagaacaa atagaagaaa agcgcgggga agatcattcc
     4321 gcggcctcac cgatacggcg catccagcgc gatgttctgc gcgatctcgc gctcccaacg
     4381 gtcgccgttg gcaagcagcc gctccttatc gaagtagagt tcctcccgcg tctcggtcgc
     4441 gaactcgaag ttcggcccct cgacgatggc atcgaccggg caggcctcct ggcaaagccc
     4501 gcaatagatg catttgacca tgtcgatgtc gtagcgggtg gtgcggcggg tgccgtcgtt
     4561 gcgccgcggc cccgcctcga tggtgatggc ttgcgccgga cagatcgcct cgcacagctt
     4621 gcaggcgatg cagcgctcct cgccgttggg atagcggcgc aacgcgtgct cgccgcgaaa
     4681 gcgcggcgag agctgtccct tctcgaatgg atagttgagc gtgggcttgg gtttgaagaa
     4741 gtaacgcatg gcgagcacga acgccgaggc gaactccctg aggaacagcg cgcgagcggc
     4801 ctggtccaat ttcatgggtt gatcctttcc ggcattgggt tccaccgcgg gatgccgctc
     4861 agtcccccac catcccgcga gcc
//
LOCUS       DATCWM010000360         4189 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_110685, whole genome shotgun sequence.
ACCESSION   DATCWM010000360 DATCWM010000000
VERSION     DATCWM010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4189
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_110685"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..1382)
                     /gene="gltA"
                     /locus_tag="VIQ50_06920"
     CDS             complement(72..1382)
                     /gene="gltA"
                     /locus_tag="VIQ50_06920"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009364374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004108 - citrate (Si)-synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HEY9360147.1"
                     /translation="MDAKTGANIKSGKFVVGDKETTFPMYDGTIGPAVIDIGKFYAET
                     GMFTYDPGYTSTGSCESKITYIDGDEGILLYRGYPIEQLAEHGDFLETCYLLLYGELP
                     TAAQKADFDNRVTHHTMVHEQMSRFYQGFRRDAHPMAVMTGCVGALSAFYHDSTDISD
                     PTQRMIASIRMIAKMPTIAAMAYKYSIGQPFIYPKNDLDYATNFLRMCFAVPCEEYKP
                     NAVLARAMDRIFILHADHEQNASTSTVRLAGSSGANPFACIAAGCACLWGPAHGGANE
                     AALNMLREIAKPERIPEYIRRAKDKNDSFRLMGFGHRVYKHYDPRAKIMQKTCHEVLS
                     EIGIKDDPLLDVALELERIALHDDYFIEKKLYPNIDFYSGITLKAMGFPTTMFTVLFA
                     VARTVGWISQWKEMIEDPQQKIGRPRQLYTGATHRDYVPISRRK"
     gene            complement(1617..3056)
                     /gene="gltX"
                     /locus_tag="VIQ50_06925"
     CDS             complement(1617..3056)
                     /gene="gltX"
                     /locus_tag="VIQ50_06925"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009332 - glutamate-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEY9360148.1"
                     /translation="MSETIVTRFAPSPTGFLHIGGARTALFNWLYARGRGGKMLLRIE
                     DTDRERSTQAAIDAILDGLNSLGLDWDGETVYQFSRSERHREVVRALLETGGAYRCYA
                     SAEELAQMREKARSEGRAKLYDGRWRDRDPAEAPPGVEPVIRLKAPLTGETVIEDQVQ
                     GRVVWQNENLDDLVLLRSDGTPTYMLAVVVDDHDMGVTHVIRGDDHLTNAARQTQIYN
                     ALGWQAPLMAHIPLIHGPDGSKLSKRHGALGVDAYRAMGYLPAALRNYLVRLGWSHGD
                     QEIFTTKEMLAAFDLPQIGRSPARFDFAKLESLNGYYLRHTDDAELLAELDRVLPHIA
                     GGPELAAKLTADTREKLLAAMGGLKERAKTLVELADGARFIVAERPLALDDNAVGLLT
                     ADARALLDDLSKDLKTVEPWNAEATEHTVRAFAERKGVKLGSVAQPLRAALTGRTTSP
                     PIFDVLAVLGKSESLARLQDQAVPTTASS"
     gene            3267..>4189
                     /gene="glnS"
                     /locus_tag="VIQ50_06930"
     CDS             3267..>4189
                     /gene="glnS"
                     /locus_tag="VIQ50_06930"
                     /EC_number="6.1.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004819 - glutamine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006425 - glutaminyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase"
                     /protein_id="HEY9360149.1"
                     /translation="MTEARAAVMEAGRDFIRDIIADDLAAKRHTSVVTRFPPEPNGYL
                     HIGHAKAICLNFGVAQEFGGRCHLRFDDTNPTKEEQEFIDAIEQDVRWLGFDWGPHLY
                     HASDYFEQLYAWAEHLIRSGNAYVDDQSQEEMRASRGTLTEPGRNSPWRERSIEENLD
                     LFRRMRAGEFPNGARVLRAKIDMASGNINLRDPVLYRILHASHPRTGTAWSIYPSYDF
                     AHGQSDAIEHITHSLCTLEFEDHRPLYDWLIEHLPVPSRPRQYEFARLNLTHTVLSKR
                     VLTELVRGGHVTGWDDPRMPTLAGLRRRGVPP"
BASE COUNT          751 a         1286 c         1355 g          797 t
ORIGIN      
        1 attccgctga cgctcatccg ggctgcgggc ttgcttgtgg aaggggccgg cgcgacgccg
       61 acgggcgctg attacttccg gcgcgagatc ggcacgtaat cgcggtgggt ggcgcccgta
      121 taaagctgtc gcgggcggcc gatcttctgc tgcggatcct cgatcatttc cttccactgg
      181 gaaatccagc cgacggtgcg ggcgaccgcg aacagaacgg tgaacatcgt ggtgggaaag
      241 cccatcgcct tgagggtgat gcccgaatag aaatcgatgt tcggatagag tttcttctcg
      301 atgaagtagt cgtcgtgtag tgcgatccgc tcgagctcga gcgccacgtc gagcagcgga
      361 tcgtccttga tgccgatctc gctcagtact tcatggcagg tcttctgcat gatcttcgcg
      421 cggggatcat agtgcttgta gacccggtgg ccgaagccca tgaggcggaa actgtcgttc
      481 ttgtccttgg cgcggcgaat gtattccggg atgcgctccg gtttggcgat ctcccgcagc
      541 atgttcagtg cggcctcgtt ggcgccgcca tgcgcaggac cccacaggca tgcacagccg
      601 gccgcgatgc aggcgaaggg attggcgccg gaggagccgg cgagcctgac ggtggaggtc
      661 gaggcattct gctcgtggtc ggcatgcaaa atgaagatgc ggtccatcgc gcgggcgagg
      721 acggcgttgg gcttgtactc ctcgcaaggc accgcgaagc acatgcgcag gaaattcgtc
      781 gcgtaatcga ggtcgttctt cggatagatg aagggctgac cgatcgaata tttgtaggcc
      841 atggccgcga tcgtcggcat cttcgcgatc atgcggatcg aggcgatcat ccgctgggtc
      901 ggatccgaga tgtcggtaga gtcgtgatag aacgccgaaa gcgcgccgac acagcccgtc
      961 atcactgcca tcgggtgcgc gtcacgccga aaaccttgat aaaaccgact catctgctcg
     1021 tgcaccatgg tgtggtgcgt gacgcggttg tcgaagtcgg ctttctgcgc ggcggtggga
     1081 agctcgccgt agagcaaaag atagcaggtc tcgagaaaat cgccgtgctc ggcgagctgc
     1141 tcgatcggat atccgcgata gagcaggata ccttcgtcgc cgtcgatata ggtgattttc
     1201 gactcgcagc tgccggtcga ggtatagccg ggatcgtagg tgaacatccc ggtctcggcg
     1261 tagaatttgc cgatatcgat taccgcggga ccgatagttc catcgtacat cgggaacgtg
     1321 gtctctttgt cgccgacgac gaatttgcca gattttatgt tggcgccggt cttcgcatcc
     1381 atgatcgagc cctcggttgt gtcgcccggc ggaccggcac tccctgcggc agcgggatgg
     1441 cttgcgccag tgctcttaag gaacgcccgc cgggaggccg ctgtttgcgt agcccatccc
     1501 actgtgcacc gcaagacggc ggcgccgacg cagcgccaat gccgatcaga cagcgattat
     1561 gtggaggcta attagccgtt tgaccagagc gttcttcgtt gccgcgacgg ccgaacttag
     1621 ctgctggcgg tcgtcgggac ggcttggtcc tgcaggcgag cgaggctctc gctcttcccc
     1681 agcactgcga gtacatcgaa gatcggaggc gaggtcgtgc ggccggtgag cgccgcgcgc
     1741 agcggctgcg cgacgctacc gagcttcaca cccttgcgct cggcaaaggc gcgcacggtg
     1801 tgctcggtcg cctcggcgtt ccagggctcg accgtcttga ggtccttcga aaggtcgtcg
     1861 aggagagcgc gcgcatccgc ggtcagcagg cccaccgcat tgtcgtcgag cgccagcggg
     1921 cgctcggcca cgatgaagcg tgcaccatcc gccagctcga ccaaggtctt ggcccgctcc
     1981 ttcaagccgc ccatggccgc gagcagcttc tcgcgcgtgt ccgccgtcaa tttggccgca
     2041 agctcgggcc cgccagcaat gtggggcagc acgcgatcga gctcggcgag gagctcggca
     2101 tcgtcggtgt ggcgcagata atagccgttg aggctctcga gcttggcaaa gtcgaaccgc
     2161 gccggcgagc ggccgatttg cggcagatcg aaggcggcaa gcatctcctt ggtggtaaaa
     2221 atttcctggt cgccgtggct ccagcccaac cgcacgagat agttccgcag cgctgccggc
     2281 agatatccca tcgcccgata ggcatcgacg ccgagcgcgc cgtggcgctt ggacaatttc
     2341 gagccgtccg gcccatgaat gagcgggatg tgcgccatca gcggggcctg ccagccgagc
     2401 gcgttataga tctgggtctg gcgcgcggca ttggtgaggt gatcgtcgcc acggatcaca
     2461 tgggtcaccc ccatgtcgtg gtcgtccacc acgacggcga gcatataggt cggcgtgccg
     2521 tccgaacgca gcagcacgag gtcatcgaga ttctcgttct gccataccac gcgcccctgt
     2581 acctgatcct cgatcaccgt ctcgccagta agcggcgcct tgagccggat caccggctca
     2641 accccgggcg gagcttccgc gggatcgcga tcgcgccagc ggccgtcata gagcttggca
     2701 cgtccttcgc tgcgcgcctt ttcgcgcatc tgtgcgagct cttcggccga ggcatagcaa
     2761 cgataggcac ctcctgtttc caacagcgcg cgaacgacct cacggtggcg ttccgagcgt
     2821 gagaattgat agacggtctc gccgtcccaa tcgaggccaa gcgagttgag gccatcgagg
     2881 atcgcatcga ttgccgcctg cgtggagcgc tcccggtcgg tatcctcgat ccgcagcaac
     2941 attttgccgc cgcgcccgcg ggcatacagc caattgaaca gcgcagtgcg cgcgcccccg
     3001 atgtgcagga agcccgtggg tgagggagca aagcgggtga cgatggtttc gctcatatcg
     3061 atggatgaca cgctcgcgca gcttcagcgg gcctaccgag cggcctgcga agtgctcgcg
     3121 gcgcgcgacg cgcccctggg ccgtcagccg gatccgtgta gcatagaaat ggcacaggtc
     3181 attaagggtt ttgcgggtcg atggtcttgg cgcgtgcgcg cggatttggc acataggcgc
     3241 tgtttcgaca acaggatcga tgcagcatga cggaagccag agccgcggtg atggaggcag
     3301 ggcgcgattt catccgcgac atcattgccg acgatctcgc cgcgaaacgc cacaccagcg
     3361 tggtgacccg gtttccgccg gagccgaacg ggtatctgca catcggtcac gccaaggcga
     3421 tttgcctcaa tttcggcgtc gcgcaggaat tcggcggccg ctgtcatctg cgcttcgatg
     3481 acaccaatcc caccaaagag gagcaggaat ttatcgatgc catcgagcag gatgtgcgtt
     3541 ggctgggctt cgactgggga cctcacctct accacgcatc ggactatttc gagcagctct
     3601 acgcgtgggc cgagcacctg atccgtagcg gtaacgccta tgtcgatgat cagtcgcagg
     3661 aggagatgcg ggcgagtcgc ggcacgctga ccgagcccgg gcgcaatagt ccatggcgcg
     3721 agcgaagcat cgaggaaaac ctcgaccttt tccgccgcat gcgagcgggc gaattcccca
     3781 acggggcgcg ggtgctgcgg gcgaagatcg acatggcctc aggtaacatc aatctgcgcg
     3841 atccggtgct ctatcgcatt ttgcacgcga gccatcctcg caccggcacg gcgtggagca
     3901 tttatccaag ctatgacttc gcccatggcc agtccgatgc gatcgagcac atcacccact
     3961 ccctctgcac gcttgaattc gaggatcatc ggcccttgta cgactggctc atcgagcatc
     4021 tcccggttcc ttcccggccg cggcaatacg aatttgcccg cctcaatctc acccataccg
     4081 tgctgtccaa gcgcgtgctc accgaactgg tgcgcggcgg ccacgtcacg gggtgggacg
     4141 atccgcgcat gccgacgctg gcggggctgc gtcgccgcgg cgtcccgcc
//
LOCUS       DATCWM010000361         3427 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_299576, whole genome shotgun sequence.
ACCESSION   DATCWM010000361 DATCWM010000000
VERSION     DATCWM010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3427)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3427)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3427
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_299576"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(276..1097)
                     /locus_tag="VIQ50_06935"
     CDS             complement(276..1097)
                     /locus_tag="VIQ50_06935"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014290259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEY9360150.1"
                     /translation="MCVPGCQEAVWDAVSRRRFFKGALAASVAATAAAPQIADGAPAR
                     SFTSAVDLTHTMSAEFPTFFGVPGIEMEKKFDLKKDGFNLYWWRLIEHAGTHLDAPIH
                     FSESGATVEKIAADTLVAPLAVIDVAAKAAQNPDYLLSREDLANWERKYRRLPDNCCV
                     AMQSGWAQHVGNAAKFTGKDPSGVFHFPGVSPEAAEWLMKERKVVGLAVDTLSLDHGP
                     SKDFKVHRAWLPSGRWGLENVANLDKVPASGATLVVGLAKVKDATGAPARLIALT"
     gene            complement(1259..1783)
                     /locus_tag="VIQ50_06940"
     CDS             complement(1259..1783)
                     /locus_tag="VIQ50_06940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360151.1"
                     /translation="MQRLNQIGLRMIAAAAFCCALAACSSDLGLNNLTLVPKPETLLR
                     KPDWATFSGGKDGFTLRPVTAADLVNAAGQCAEGEQAGSDSTTTGALVAGGIALQMTE
                     CDVVRRAGAVDKIDFGSDDRGERLVTLTYLRGPLPGIYRFSGGRLVAIERAPAPPPAP
                     AKSQKAPAKKPAGT"
     gene            complement(1959..2150)
                     /locus_tag="VIQ50_06945"
     CDS             complement(1959..2150)
                     /locus_tag="VIQ50_06945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360152.1"
                     /translation="MSLLIVYVALVIMGNLIAYFVGLVIERTVPTASLPAFLAMYFAF
                     LWVSWVIAVRITQPRVRPQ"
     gene            complement(2294..2746)
                     /locus_tag="VIQ50_06950"
     CDS             complement(2294..2746)
                     /locus_tag="VIQ50_06950"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HEY9360153.1"
                     /translation="MTEILIYQLQRQPLERVLPTLIEKSVERGWRVIVQAASEERVEA
                     LDAHLWTFRDDSFLPHGTWREAEASEQPILLTLGGDNPNGAAVRFLVDGAPMPADAES
                     YQRIVLLVDGDDAEAVAAARAHWSEGKAKGLDVTYWRPDEEGRWQRLP"
     gene            complement(2805..>3427)
                     /locus_tag="VIQ50_06955"
     CDS             complement(2805..>3427)
                     /locus_tag="VIQ50_06955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007591964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HEY9360154.1"
                     /translation="CVVGLMHALAGRKAKVNAVGAIGLVENMPDGKAQRPGDIVTTMS
                     GQTIEIINTDAEGRLVLSDLLHYVNKRFKPKFMIDLATLTGAIIVALGQEYAGLFAND
                     EKLAERLLEVGNEIGERVWRMPLGPEYDKMIDSKFADMKNTGGRYGGAITAAQLLQRF
                     VDKTPWAHLDIAGTAMGSPQTDINRSWGSGFGVRLLDRLVAEYYEK"
BASE COUNT          616 a         1124 c         1067 g          620 t
ORIGIN      
        1 ccgccggcgg aggtggcaaa ggtggtgggg gaatgggcgg cggccatcac ggccacggcg
       61 gccatggtta ttggggcggc gggttcggcg gcgttgtgct gatcggaccg agctgctggc
      121 ggtggatccc gggtgtcggc agggtgtacg tctgctactg atcttcgctg acgactcgaa
      181 ctcggtacag agccccggtc tcgcctcgcg aagccggggc agttcgatgc gcagagcaat
      241 cggaaacagt tttttctttt agcagtcagc ccttctcatg tgagggcgat gaggcgcgcg
      301 ggagcgccgg ttgcgtcctt gaccttcgcc agacccacga ccagcgtggc gcccgacgcc
      361 ggcaccttgt caagattggc gacattttcc aggccccagc ggcccgacgg caaccaagcg
      421 cgatgaactt tgaaatcttt cgaaggacca tggtcgagcg acagcgtgtc gaccgccaag
      481 cccaccacct tgcgctcctt catcagccac tcggccgcct ccggactgac cccgggaaag
      541 tggaacacgc ccgagggatc cttgccggtg aatttggccg cgttgccgac gtgctgcgcc
      601 cagccggact gcatcgctac gcagcaattg tcggggagcc ggcggtactt tcgttcccag
      661 ttggcgagat cctcgcggct gagcaagtaa tcgggattct gcgccgcttt ggccgctaca
      721 tcgatgaccg cgagcggggc gacgagcgtg tctgccgcaa ttttttcgac ggtggcaccg
      781 gattccgaga aatggatcgg cgcgtccaag tgcgtgccgg cgtgttcgat gagccgccac
      841 caataaagat tgaacccatc cttcttgagg tcaaatttct tctccatctc aattccgggc
      901 acgccgaaaa aggtgggaaa ttcggccgac atggtatgcg tgaggtcgac cgccgaggtg
      961 aagctgcggg ccggcgcccc gtcggcgatc tgcggcgctg ccgccgtggc ggcgacggac
     1021 gcggcgagcg cccccttgaa gaagcgccgc cgcgaaaccg catcccacac cgcttcctga
     1081 catccgggaa cacacatgct cagcctccat tttatcaacc gcggtcacgc gagcggatgc
     1141 aacattggcg ctcgcggcgt ggatgcgcaa tgcggcattg ccctgtcgtg atggcggatt
     1201 agcaatctgg aaacgaccac gacccaccgc agctgggcct gacccttgcg gggccggatc
     1261 acgtgccggc tggtttcttt gccggcgcct tctgcgattt tgccggcgcg ggcggcggcg
     1321 ccggggcgcg ctcgatcgct accaagcgcc cgccggaaaa acggtagatg cccggcaaag
     1381 gtccacgcag gtaagtgagc gtgacgagac gctcgccgcg gtcatcagaa ccgaaatcga
     1441 tcttgtcgac cgcgcctgcg cgccgcacaa cgtcacactc cgtcatctgc aacgcgatgc
     1501 cgccggcaac gagcgccccc gttgtcgtcg agtcgctccc ggcttgctca ccttcggcgc
     1561 actggccggc agcgttgacg agatccgccg cagtcaccgg gcgcaacgta aacccgtcct
     1621 tgccgcccga gaacgtcgcc caatcgggct tgcgcagcaa agtttcgggc ttgggaacga
     1681 gcgtgagatt gttgaggccg agatcggacg agcacgcggc cagggcgcaa cagaacgccg
     1741 ccgcggcaat catgcgcaac ccgatttggt tcagtctttg catcgcaacg gccccggccc
     1801 cggttaccgg tctcgaccga cgcgcccagc ggcggagatt ttgcgtcagc atgatcagtt
     1861 tgatcaatgg ctgttttcgc ttccggacgc gagaagttgg ggcaagcctg tcctccttat
     1921 agagcgaggg cgcgcagggc ggcaacgccg cgcaatagct attgcggccg tacccgcggc
     1981 tgcgtgatgc ggaccgcgat cacccaggaa acccagagga atgcaaaata catcgccaga
     2041 aacgccggca gactcgctgt cggcacggtc cgttcaatca cgagcccgac gaaataggca
     2101 atgaggttgc ccatgatcac cagcgcgaca tagacgatca gcagggacat ggctcacttc
     2161 ctctaccgcc tcgcggccgc gatattccaa cacgtttgcg caaaggccac aatagcggcc
     2221 tccgcccggc cgatgcggcg gcgtgttttc gagcgaccat ccatagcgtc aggtagcggc
     2281 gccttcgacg aactcacggc aagcgctgcc accgcccctc ctcgtccggc cgccaatacg
     2341 taacgtccaa gcccttcgcc ttgccttcgc tccagtgtgc gcgcgcggcg gcgaccgctt
     2401 cggcatcatc tccgtccacg agcagcacga tgcgttgata gctctcggcg tctgccggca
     2461 tcggtgcccc atcgacgaga aagcgcacgg ccgcgccgtt ggggttatcg ccgccgagcg
     2521 tgagcaggat gggttgctcg ctcgcctcag cctcccgcca ggtgccgtgc gggagaaagc
     2581 tgtcgtcgcg aaaggtccac aggtgcgcat cgagcgcttc gactcgctcc tcggaggctg
     2641 cttgcacgat cacgcgccag ccgcgctcga ccgatttttc gatcagcgtg ggaagcacgc
     2701 gctcgagcgg ctgacgttgc agctgataaa tcaggatttc cgtcatgatg agcgcgccac
     2761 catcacgcgt tacccgcaac gttgccggcg accggggtca gccgctactt ctcgtaatat
     2821 tcggcaacga gtcgatccaa cagccgcacg ccgaagcctg agccccagct ccggttgatg
     2881 tcggtttgcg gcgagcccat ggccgtgcct gcgatgtcga gatgcgccca cggcgtcttg
     2941 tcgacgaacc gctgcagcag ttgcgcggcc gtgatggcgc cgccgtaccg gccgccggta
     3001 ttcttcatgt cggcgaattt cgaatcgatc atcttgtcgt attccggtcc gagcggcata
     3061 cgccagaccc gctcgccgat ctcgttgccg acctcaagga gccgctcggc gagcttttcg
     3121 tcattggcga acaaaccggc gtattcctgc ccgagcgcga cgatgatcgc accggtcaaa
     3181 gtcgcaagat cgatcatgaa cttcggtttg aaacgcttgt tcacatagtg caacaggtcg
     3241 gacagcacca gccggccctc ggcatcggtg ttgatgatct cgatcgtctg ccccgacatg
     3301 gtggtgacga tatcccccgg gcgctgcgcc ttgccgtcgg gcatgttctc cacgaggccg
     3361 atcgcgccga ccgcattgac tttcgccttg cgccccgcca acgcatgcat caagccgacg
     3421 acgcagg
//
LOCUS       DATCWM010000362         2041 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_342923, whole genome shotgun sequence.
ACCESSION   DATCWM010000362 DATCWM010000000
VERSION     DATCWM010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2041
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_342923"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1729)
                     /locus_tag="VIQ50_06960"
     CDS             complement(<1..1729)
                     /locus_tag="VIQ50_06960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEY9360155.1"
                     /translation="MTTRTSLYLGVAAIAVAAALEGSAIELAAQQPRAVAIDEDDIGG
                     VVTGANGPEAGVWVIAETTDLPTRYAKMVVTDDQGRYVVPDLPKAKYKVWVRGYGLVD
                     SPKVDGQPGQQLELRAVPAPNEAVAAQYYPAIYWYAMLKIPDADEFGKKDGEIPDKIK
                     QTDWLNLMKNNGCVGCHQLGQLSTRTLPPGLGEFSNHAEAWMRRIQAGQSGALMVNIA
                     AGQLAGAPIKYFADWTQRIANGELPKHKPTRPQGLERNVVVTTWDWGDPKKYLHDLIA
                     SDRRYPTVNAYGPVFGSPEYSTDVIPILDPKTHTVTNFKAPVRDADTPEGLGQGHAAM
                     DKPLGPSPYWGEEKLYDTKVNNHNSMFDRQGRVWMAAAVRGPKNPDFCKKGSEHPSAK
                     LFPLDQTHRAVSILDPKTMKYTFVDTCFQTHHLQFGHDANETLWTSSGGGGGVVGWVN
                     TKLFEETGDAAKSQGWTALILDTNGNGKRDDYVEPNQPVDPTKDKRIAQVFYAVMPSP
                     VDGSVWGTLRANPGSIVRLDPGSNPPETALAEIYNVPLPGFGPRGGDIDSQGVVWVSL
                     ASGHIGSFDR"
     gene            complement(1895..>2041)
                     /locus_tag="VIQ50_06965"
     CDS             complement(1895..>2041)
                     /locus_tag="VIQ50_06965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020187052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase"
                     /protein_id="HEY9360156.1"
                     /translation="PLVARIVAGWPQRIEARRARELGFKAESSFDEIVRIHIEEDRGG
                     SFVN"
BASE COUNT          309 a          669 c          653 g          410 t
ORIGIN      
        1 ggcggtcgaa gctgccgata tgaccgctcg cgagcgacac ccacaccacg ccctggctgt
       61 cgatgtcgcc gccgcgcgga ccaaatccgg gcaacggcac attgtagatt tccgcgagcg
      121 ccgtctccgg cgggttggag cccggatcga gccgtacgat cgagccggga ttcgctcgca
      181 gcgtgcccca gaccgagcca tcgaccgggc tcggcattac cgcgtagaac acttgggcga
      241 tgcgcttgtc cttggttgga tcgaccggct ggttgggctc cacatagtca tcccgcttgc
      301 cgttgccgtt ggtgtcgagg atgagcgcgg tccagccttg cgatttcgcc gcgtcgccgg
      361 tctcctcgaa cagtttggtg ttgacccagc ccacgacacc gccgccgcca ccgctcgacg
      421 tccatagcgt ctcgttggcg tcgtggccga attgcaggtg atgcgtttgg aagcaggtgt
      481 cgacgaaggt gtacttcatc gtcttggggt cgagaatgga gaccgcgcgg tgcgtctggt
      541 cgagcgggaa cagcttggcc gagggatgct cggagccttt tttgcagaag tccgggttct
      601 tggggccgcg caccgccgct gccatccaaa cccggccctg cctgtcgaac atggaattgt
      661 gattgttgac cttggtgtcg tagagcttct cctcgcccca atacggcgaa ggcccgagcg
      721 gcttgtccat ggccgcgtgt ccctgtccga gcccttccgg ggtgtccgcg tcgcgcaccg
      781 gagccttgaa gttggtgacg gtgtgggtct tcggatccaa gatcgggatg acgtcggtcg
      841 aatattcggg cgagccgaac accggaccat aggcattgac ggtcggataa cggcggtccg
      901 aggcgatcag atcgtgcaaa tacttcttcg ggtcgcccca atcccacgtg gtgaccacga
      961 cgttgcgctc gagcccttgc ggccgcgtcg gcttgtgctt gggtaactcg ccgttggcga
     1021 tccgttgggt ccagtccgcg aagtacttga tcggcgcgcc ggctagctgg cccgccgcga
     1081 tgttgaccat cagcgccccg gactgcccgg cctggatgcg gcgcatccac gcctccgcgt
     1141 ggttcgagaa ttcccccagc cccggcggca gcgtccgggt cgacaattgg cccagctgat
     1201 ggcagccgac gcagccgtta ttcttcatca ggttgagcca gtcggtctgc ttgatcttgt
     1261 cgggaatctc gccgtccttc ttgccgaact cgtccgcgtc cgggatcttg agcatcgcgt
     1321 accagtagat cgccgggtag tactgcgccg ccaccgcttc gttcggcgcc ggcaccgcgc
     1381 gcagctcgag ctgttgaccc ggctggccgt cgaccttagg ggaatcgacg agaccgtagc
     1441 cgcgcaccca caccttgtat ttggctttgg ggagatcagg cacgacgtac cggccctggt
     1501 cgtcagtcac gaccatcttc gcgtagcggg tgggaagatc ggtggtttcc gcgattaccc
     1561 agacgccggc ctccgggccg ttcgcgccgg tcacgacgcc accgatatcg tcctcgtcga
     1621 tggccaccgc tcgcggttgc tgcgcggcaa gttcgatcgc cgagccctcc aacgccgccg
     1681 cgacagcgat cgctgccacg ccgagataga ggctggttct ggttgtcatg gttactccct
     1741 ccttggcttc cccgcttcca ggcccgctat gcatcaggct cgatggcgga atatctcatc
     1801 ggattgtcgg ccgaaatggc gaggctgtcc atcacctccg ccgcaaatcg cgcatgcctt
     1861 gcgggggcgc tgcgtgcgtg cgtttggcgc cgcctcagtt cacgaacgag ccgccgcggt
     1921 cttcctcgat atggatgcgc acgatttcgt cgaacgaact ctcggctttg aagccgagct
     1981 cgcgcgcgcg gcgcgcctca atgcgctgcg gccaacccgc gacgatgcgc gcgaccaacg
     2041 g
//
LOCUS       DATCWM010000363         5272 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_402242, whole genome shotgun sequence.
ACCESSION   DATCWM010000363 DATCWM010000000
VERSION     DATCWM010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5272)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5272)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5272
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_402242"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..693
                     /locus_tag="VIQ50_06970"
     CDS             <1..693
                     /locus_tag="VIQ50_06970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012760697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ring-opening amidohydrolase"
                     /protein_id="HEY9360157.1"
                     /translation="RAAMAAASIEKMSDVHFVQIKCPLLTAQRIAEADNRGARVATRD
                     TLKSMGLSRAASALGIAVALGEVQRANLSDDAIGADFEMWSGRASCSAGIELRNHEIV
                     VLGMSRSWSGSLAIGHAVMADAIDTEPVRAVLQGLGIAANGQLSASERNRVVAVLAKA
                     EASHDGLLRGHRHTMLDDSDISPTRHARAFVCGALAGVFGHAEIYVSGGAEHQGPDGG
                     GPVALIVDRHRL"
     gene            968..1777
                     /locus_tag="VIQ50_06975"
     CDS             968..1777
                     /locus_tag="VIQ50_06975"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018900981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9360158.1"
                     /translation="MIEFESVTLAYGRGESAVRALDKTSIKIGEGDFVALVGPSGCGK
                     STILKLVGRLISATTGYVFVAGREVGAQDVRIGMAFQNPTLLPWLTVRQNVMLPLKIV
                     QPFRSGWGSKRKTEYRDRAEALLAQVGLSGFGDKHPWQLSGGMQQRASLCRALIHDPT
                     LLLLDEPFGALDQFTREELWAVLQELWLTRKPTVILVTHDLRESAFLANRIVVMSARP
                     GRVLEDETVPFERPRNIAMTYDAAFVALNQRLRSLIVEVRAGSEVSLGAAA"
     gene            1774..2547
                     /locus_tag="VIQ50_06980"
     CDS             1774..2547
                     /locus_tag="VIQ50_06980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006725474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9360159.1"
                     /translation="MMAKLRQKAASIALILGFFVFWELACLALGVSDIILPRPSQVFY
                     TLFSRWPAIMPHAAQTLYTTLVGFAIGVAIGVCLGALIGSSKIAYDTAYPLLVGFSST
                     PKIAVVPIFVLWFGAGTVPAILTSIAISIFPVVVNVSTGLATTEPELEDVLRTLKARK
                     LDILWNVGLPRAMPYFFASLKVAVTLAFVGTVLAETVASNRGIGNMMMIASSTFNVPL
                     VFAGLFVLATLGICLYVGFSLTEKHFTGWANRKSEIVTV"
     gene            2605..3648
                     /locus_tag="VIQ50_06985"
     CDS             2605..3648
                     /locus_tag="VIQ50_06985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9360160.1"
                     /translation="MHIARRAAPLGAALGLLALFAFPAASQSLTPIRFTLDFKFQGIH
                     AWYYVARDKGYFKAEGLDVTIDQGEGSAATITRIMSGAYDAGFGDINAIIQQAAQKPG
                     EQPVMVYQIYSRPPFVLVTKADGPIKTVKDVEGQTLGGPPGSATLRLFPSFAKINGID
                     ASKVQMLNMAPNLQEQMLIQGQVAGSLVFNVTSYINLLQQRQDPDKDFRWFNFGDYGL
                     DLYSNGLMVSQKLLKENPKAVAGLVKASNRALKEVLANPDEGIATLLKVEPLLNGNIE
                     KQRIAYALKNLMTSPENAEIGFGDLKDDRLARSVGVIVEAYELPRKPAVGEIFNRSFL
                     PPKSERQIEAKVN"
     gene            3654..5210
                     /locus_tag="VIQ50_06990"
     CDS             3654..5210
                     /locus_tag="VIQ50_06990"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9360161.1"
                     /translation="MDATAQTLIDGARVYDRAFDIHKPPVRDVIVKGDRIVSVSSSDE
                     LAEEKRAIREAAAQGRSGARVVDGRGMLLIPGLVNAHYHSYDVLSKGRFEDMPFDVWM
                     LHAQPAYWGKRSRAELRARTLVGAMECLRHGITTLQDMNSLVPQDEETLDIILSAYAE
                     VGIRVVFSITVRDVGALDLEPFLPADIPGEAAAIIAGKPGDAQADIAFVAAQIKRLDP
                     LPPRFHWALSPSGPQRCSQALLEGIAELSERHQLPVTTHVYETRAQLAKARAVYPQHQ
                     GSLVNYMAAVGLLTPRTTIAHSVYITPGEVEQLSRAGAGVVHNPLSNLKLKNGVAPLL
                     DLKRAGVNLALGCDNCSCSDCQNLFQAMKMFTLLGAGMDGAPSGIGASDAIAAATLGG
                     AHALGLGGEIGEVRPGMKADLVLIDLADFAYLPFNSAARQLVYCETGRAVHTVLVDGK
                     VVLAKGQLTTVNEADFHAEVADVMRTVDRDYAALVERQAPAVPYLLEGNKALQAAPLG
                     VHRLIGEFGH"
BASE COUNT          940 a         1644 c         1706 g          982 t
ORIGIN      
        1 cgcgctgcca tggcggcggc aagcatcgag aaaatgtcgg acgttcattt cgttcagatc
       61 aaatgtccat tgctgaccgc gcagcggatc gcggaggctg acaaccgcgg cgcacgggtc
      121 gcaacgcgcg atacgctcaa atcgatgggc ctgtcgcggg cagcgagtgc gctcggcatc
      181 gcggtcgcac tcggtgaagt ccagcgggcg aatttgagcg atgacgcgat tggtgcagat
      241 ttcgaaatgt ggtcgggccg cgccagctgt tcggcgggca tcgagctgag gaatcacgag
      301 atcgtcgtgc tcgggatgtc gcgatcctgg tcggggtcgc tcgccatcgg ccatgccgtc
      361 atggcggatg cgatcgacac cgaaccggtc cgcgcggtgt tgcagggcct cggcattgcg
      421 gcgaacggtc aactgtcggc aagcgagaga aatcgcgtgg tcgccgtgct cgccaaagcc
      481 gaggcgagtc acgacgggct gctgcgcggg catcgccata cgatgctcga tgactccgac
      541 atttcgccga cccgccatgc ccgtgctttc gtgtgcggag cgctcgccgg cgtcttcggt
      601 cacgcggaga tttacgtctc gggcggtgcg gagcatcagg gcccggatgg cggtggtccg
      661 gtcgcgttaa tcgtggatcg ccaccgccta taaatcgtgc atgcatcgcc gcgagcacac
      721 gttgcgaggt gtcatcgttc catgcgctgc aatgaccgca tgccattgac gtcaccggca
      781 aaaatgcacg tcgggggtaa gcaaggccgc taaggcggca tggcatagcg cttgcttctt
      841 aagtgggcag gaagaaatcg ggtgcctggt aatgctgcgg aaatgggcag tgcgccacga
      901 gcgggaacag gcgacttccg tcggagcgct cgcgacaact cgctccgatc gcggcaccag
      961 ggatcccctg atcgaattcg aatcggtgac gctcgcctat gggcgcggcg aaagtgccgt
     1021 ccgggcgctg gacaagacct cgatcaagat cggcgaaggc gatttcgtcg ccctggtcgg
     1081 cccttcgggc tgcggcaagt cgacgatcct caagctcgtc ggcaggctta tttcggcgac
     1141 caccgggtac gtgttcgtcg ctggtcgcga ggtcggcgcg caagacgtgc gtatcggcat
     1201 ggcgtttcag aacccgacgc tgctgccgtg gctcacggtc cgccagaatg tcatgctgcc
     1261 gctgaagatc gtgcagccat ttcgttccgg ctggggcagt aaacgaaaga ccgaataccg
     1321 cgaccgcgcg gaggctttgc tggcccaagt cgggctgtcc ggatttggcg acaagcatcc
     1381 atggcagctt tcagggggca tgcaacagcg ggcgtcgctg tgccgcgccc tgatccatga
     1441 tccgacatta ctcctgctcg acgagccgtt cggcgcgctt gatcagttca ctcgcgaaga
     1501 gctgtgggcg gtgctgcagg agttgtggct cacgcgcaag ccgaccgtca tccttgtgac
     1561 ccacgacttg cgcgaaagtg cgttcctggc caaccggatc gtcgtgatga gcgcccggcc
     1621 cggccgcgtc ctcgaggatg aaaccgtgcc gtttgaacgc ccgcgcaata ttgcgatgac
     1681 ctatgacgcg gcgttcgtgg ccttgaacca gcggctccgc agtttgatcg tggaagtccg
     1741 cgccggcagc gaagtcagcc tgggagccgc ggcatgatgg caaagctgcg ccagaaggcg
     1801 gcctccatcg cgcttatcct cgggttcttc gtattttggg agctcgcgtg cctcgcgttg
     1861 ggcgtgagcg acatcatcct gccgcggccg agccaggtgt tttacacgct gttctcgcgc
     1921 tggcccgcga tcatgccgca cgccgcgcag acgctctaca ccacgctcgt tggtttcgcc
     1981 atcggcgttg cgatcggagt ttgcctgggc gctttgatag gctcgtcgaa gatcgcatat
     2041 gacacggcct atccgctgct ggtcggtttc tcgtcgacgc cgaaaatcgc cgtcgttccc
     2101 atcttcgtgc tctggttcgg cgccggcacg gtgccggcga ttctcacctc gatcgcaatt
     2161 tcgattttcc cggtcgtggt gaacgtgtcg accggactgg ccacgaccga gccggagctc
     2221 gaggacgtcc tgaggacctt gaaagcgaga aagctcgaca tcctgtggaa cgtcgggctg
     2281 ccgcgcgcca tgccgtattt ctttgcatcg ctgaaggtgg cggtcacgct cgccttcgtc
     2341 ggcacggtgt tggcggaaac cgtcgcgtcg aatcgcggta tcggcaacat gatgatgatc
     2401 gcgtcttcga cgttcaatgt gccgctcgtg ttcgcaggat tgttcgtcct cgcgaccctc
     2461 ggcatctgtc tctatgtggg gttctcgctc accgagaagc atttcaccgg gtgggcgaac
     2521 cgcaagagcg agatcgtcac tgtctaacca aggcccaagt cgccggccgt ccgatcactg
     2581 cagccgaacc tggaggttat catcatgcat attgcccgac gggccgcgcc ccttggtgcg
     2641 gcacttggcc tgctcgccct gtttgcgttt ccggccgcga gccagtcgct cacgccgatc
     2701 cgtttcaccc tcgacttcaa gttccagggc atccacgcct ggtactacgt cgcgcgcgac
     2761 aagggttatt tcaaagccga gggactcgac gtcacgatcg accaagggga gggctcggcc
     2821 gccaccatca cccgcatcat gagcggcgcg tacgatgccg gcttcggcga tatcaatgcc
     2881 atcatccagc aggccgcgca gaagccgggc gagcagccgg tgatggtcta tcagatctac
     2941 agccggccgc cgttcgtcct cgtcaccaag gcggacgggc cgatcaagac cgtaaaagat
     3001 gtcgaaggcc agaccctcgg cgggccgccc ggcagcgcca cgctgcggct gtttccgagt
     3061 ttcgccaaga tcaacggcat cgacgccagc aaggtgcaga tgctgaacat ggctcccaac
     3121 ctgcaggagc aaatgctcat ccagggacag gtcgcgggca gcctcgtgtt caatgtcaca
     3181 agctacataa atttgttgca gcagcggcag gatcccgaca aggatttccg ctggttcaac
     3241 tttggcgact acgggcttga tctctactcc aatggcctca tggtgtcgca gaagctcctg
     3301 aaagaaaatc cgaaggccgt tgcgggattg gtgaaggcaa gcaaccgcgc actcaaggag
     3361 gtgcttgcca atcccgacga ggggatagcg acgctgctca aggtcgagcc gctgctcaac
     3421 ggcaatatcg agaagcagcg catcgcctac gcgctcaaga acctgatgac ctcgcccgag
     3481 aacgcggaga ttgggtttgg cgacctcaag gacgatcgcc tggcgcgctc cgtcggcgtg
     3541 attgtcgagg cctacgagtt gccgcggaag cccgcggttg gcgagatctt caaccgttcg
     3601 ttcctgccgc ccaaatccga gcggcagatc gaagcgaaag tgaactaggt gcaatggacg
     3661 cgacggcgca gaccctgatc gacggtgcgc gggtctacga ccgcgcgttc gatatccaca
     3721 aaccgcccgt gcgcgatgtg atcgtcaagg gcgatcgcat cgtgtcggtc agttcctccg
     3781 acgaattggc ggaagagaag cgggcaatca gggaggcggc ggcgcagggc cggtccggtg
     3841 cccgcgtcgt cgacggccgc gggatgctgc tgattcccgg cctcgtcaac gcgcactacc
     3901 attcatatga cgtgctttcc aagggccgct tcgaagacat gcccttcgat gtctggatgc
     3961 tgcacgcgca gccggcctac tggggcaagc gcagccgcgc cgagctgcgt gcgcgtacgc
     4021 tggtcggcgc catggaatgc ctgcggcacg ggatcaccac cctgcaggac atgaactcgc
     4081 tggtgccgca ggacgaagaa acgctcgaca tcattctgtc cgcctatgcc gaagtcggga
     4141 ttcgcgtcgt gttctcgatt acggtgcgcg atgtcggcgc gctcgacctc gagccgttcc
     4201 tgcctgccga catcccgggc gaagccgccg ccattatcgc gggaaagccg ggcgacgcgc
     4261 aggcggacat cgcattcgtc gcggcgcaga tcaagcggct cgatccgctg ccgccgcgat
     4321 ttcattgggc gctcagcccc tccggaccgc agcgctgctc gcaagccctg cttgaaggca
     4381 tcgccgagct ctccgaacgc caccagctgc cggtgacgac ccacgtctac gagacgcggg
     4441 cgcagctcgc caaggcgcga gccgtctatc cgcagcatca gggatcgctt gtgaactaca
     4501 tggccgcggt cggtttgctg actccgcgca ccaccattgc gcacagcgtg tacatcacgc
     4561 cgggcgaagt tgaacagctc tctcgcgccg gcgccggcgt cgtgcacaac ccgctgtcga
     4621 atctcaagct caagaacggc gtggcgccgc tgctcgatct caagcgggca ggggtcaacc
     4681 tcgcgctggg ttgtgacaat tgcagctgca gcgactgcca gaacttgttc caggccatga
     4741 aaatgttcac cctgctgggc gccggaatgg atggtgcgcc gagcggcatc ggggcctcgg
     4801 acgcgatcgc tgctgccacg ctcggcggcg cgcatgcgct cgggctcggt ggggagatcg
     4861 gagaagtgag gcctggaatg aaggccgacc tcgtgctgat cgacctcgcc gattttgctt
     4921 atctgccgtt caacagtgcc gcgcggcaac tggtctattg cgagaccggg cgcgccgttc
     4981 acaccgtgct ggtggacggc aaagtcgtgc tggcgaaggg acaactgacc accgtcaacg
     5041 aggcggattt ccacgcggag gtcgccgacg tcatgcgcac cgtcgaccgc gattatgcgg
     5101 cgctggtgga gcgccaggcg ccggcggttc cttatctgct cgagggcaat aaggcgctcc
     5161 aggccgcgcc gctcggggtt caccgcttga ttggcgagtt cggccactga gcggttgctg
     5221 ccgcgtccac ggcatcgagt cgaacgtcac ccgcgggcag aagcgcgtcg aa
//
LOCUS       DATCWM010000364         2611 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_240238, whole genome shotgun sequence.
ACCESSION   DATCWM010000364 DATCWM010000000
VERSION     DATCWM010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2611
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_240238"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            21..713
                     /locus_tag="VIQ50_06995"
     CDS             21..713
                     /locus_tag="VIQ50_06995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003608706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HEY9360162.1"
                     /translation="MSATDTPFERAGEPYRVGRDREWASAGAGRGYVYATGHGEGGPA
                     SKRVIVGYGFWIFLLSDIVMFSAFFAAHAVLQTATAGGPSGRELFNLWSIVAQTAFLL
                     ISSFTCGLSAVATEARNQLWTQVALLVTGLFGLAFLVLEGRDFASMVMQGAGPDRSAF
                     LSSLFAVVGLHGLHVSAGLLWLGTMMAQVFVKGFRPDILRRLVCFNLFWHALDIIWVA
                     LFTVVYLIGLGR"
     gene            710..1105
                     /gene="cyoD"
                     /locus_tag="VIQ50_07000"
     CDS             710..1105
                     /gene="cyoD"
                     /locus_tag="VIQ50_07000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009486 - cytochrome bo3 ubiquinol oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0015990 - electron transport coupled proton
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit IV"
                     /protein_id="HEY9360163.1"
                     /translation="MSHETDTRDPGDVGPGFMDAGEVTVREGIARYVIGFVLASLLTA
                     ASFYVLSTSLIWGPGIPVALVVLAIAQMGVHLVFFLHITTAPDNTNNVLALAFGVLIV
                     ALVIAGSLWIMDNLNENMMPMHQMMQMQR"
     gene            1295..2035
                     /gene="maeA"
                     /locus_tag="VIQ50_07005"
                     /pseudo
     CDS             1295..2035
                     /gene="maeA"
                     /locus_tag="VIQ50_07005"
                     /inference="COORDINATES: protein motif:HMM:NF010052.0"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="oxaloacetate-decarboxylating malate
                     dehydrogenase"
     gene            2097..>2611
                     /locus_tag="VIQ50_07010"
     CDS             2097..>2611
                     /locus_tag="VIQ50_07010"
                     /inference="COORDINATES: protein motif:HMM:NF015882.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malic enzyme-like NAD(P)-binding protein"
                     /protein_id="HEY9360164.1"
                     /translation="MALAGIYGALRITGQKLSEQRFLFLGAGSAATGIAELISLAMAQ
                     EGMDLAAARRRNALFDINGLLVTSRTDLAGFQKPFAQEAAPVPTFVAAVEALKPTGII
                     GVSTVPKLFNHDVIGAMARINQRPIIFPYSNPTSRSECSAEEAYRWSDGRAVFASGSP
                     FPPVEIAGRHFV"
BASE COUNT          448 a          832 c          807 g          524 t
ORIGIN      
        1 caacacgctg gtcagccgac atgagcgcga ccgatacccc gttcgagcgc gccggcgagc
       61 cgtaccgggt cgggcgcgac cgtgagtggg ccagcgccgg cgccggccga ggatacgtgt
      121 atgcaacggg gcacggcgaa ggcggtccag cctccaagcg cgtgatcgtc ggctacggtt
      181 tctggatctt tctgctcagc gacatcgtga tgttctcggc cttcttcgcc gcgcacgcgg
      241 tgctgcagac ggccacggcg ggcgggcctt ccggacgcga gctgttcaac ttgtggagca
      301 tcgtcgcgca gacggcattt ttgctcatct cgagcttcac ctgcgggcta tcggccgtag
      361 cgaccgaggc acgaaatcag ctgtggacac aggtcgcgct gttggtgacg ggattattcg
      421 ggctggcgtt cctggtgctc gaggggcggg attttgccag catggtgatg caaggcgccg
      481 gccccgaccg cagcgctttc ctttcatcct tgttcgccgt tgtcggcttg cacggactac
      541 acgtcagcgc ggggctgttg tggctgggca cgatgatggc gcaagtcttc gtcaagggct
      601 tccgcccgga tattctgcgc cgcctggtgt gcttcaatct gttctggcac gcgctcgaca
      661 ttatctgggt cgctttgttc acggtcgtct acctgattgg attagggcga tgagtcacga
      721 aaccgacacg agagacccgg gcgacgtggg gcccggtttc atggatgcgg gggaagttac
      781 ggttcgcgag ggcattgcgc gctatgtcat cggatttgtg ctcgcgtcct tgctgaccgc
      841 agcgtcgttc tatgtcctca gtacctcact gatctggggg cccggaatcc cggtggcgct
      901 cgtggtcctc gccatcgcgc aaatgggcgt gcatctggtc ttctttctgc acatcacgac
      961 ggctccggat aacaccaata acgtgctcgc gctggcgttc ggtgtcttga tcgtcgcgtt
     1021 ggtaatcgcc ggatcgctgt ggattatgga taacctcaac gaaaacatga tgccgatgca
     1081 tcagatgatg cagatgcaac gatgatggtt cagcgaccgg ccccggtatg ctcatggacc
     1141 ataacgttgc ggcgaacagc ggccccctcc gccaggcgac gtaaagcctg agttcgttgc
     1201 tggcaggtaa gcctcagggc tcagagcggc cacaccggtc gaatcggcaa taacgaatcg
     1261 ggcaagtcag gccgcggcgc acggagtaat taagatgtcc ggatcgacgc atcctaccgg
     1321 ttacgatttg cttcgtaatc cgcgcctcaa caaaggaacg gcgttcaccg aggcgcagcg
     1381 ccgcgcgtgg gggctcgaag gcttgctgcc gccggccgtg accacgctgg cattacaggt
     1441 ggcgcgccgg cacgccgaga ttgccgccct tcaggacgat ctgcagaaat acctcgtgtt
     1501 gtcggatctg cagacgcgga acgagacgct ctactacgcg gtcctgatgt ccgacccggc
     1561 gacttacatg ccaatcgtct atactccgac ggtcggcgag gcatgccaaa aattcggtca
     1621 tatcttccgc gcgccgcgcg gcatgtatct gccggtcagc tcgcgcggcc gcttgaagca
     1681 gctgctctcc aattggccgg aacgcgacgt gcgcttcatc gtcgtcacag atggtgagcg
     1741 catcctcggt ctcggcgatc tcggagccgg cggcatgggc atcccaatcg gcaagctctc
     1801 gctctacacc gcctgcgccg gcgtgccgcc gcaatactgt ctgcccatcg tcctcgacgt
     1861 tggcaccagc aaccaggtcc tgctcgatga tccgctttac cagggcctgc gccagcaccg
     1921 cgtgcgcggc gaagagtatc tcgccttcat cgacgaattc gtagcggcgg tcgagcagct
     1981 ctacccgaaa tgctgcatcc agtgggagga tttcgccaat ttcaacgcgg tccccgtcct
     2041 cgcgcgatat cgcgacaaga tctgcacctt caacgacgac atccagggca ccgcccgtgg
     2101 cactcgccgg catctacggc gccttgcgca taaccgggca gaagctttcc gagcagcgtt
     2161 tcctgttcct cggcgctggc tcggccgcga ccgggatcgc cgagctgatc agcctggcga
     2221 tggcgcagga gggaatggac ctcgccgctg ctcggcgccg caatgcccta ttcgacatca
     2281 acggcctgct cgtgacctcg cgcaccgatc ttgccggctt tcagaagcct ttcgcgcagg
     2341 aagctgcgcc agtgcccaca tttgtcgcgg cggtcgaggc gctcaagcca accggcatca
     2401 tcggcgtgag cactgtaccg aaactgttca accacgacgt gatcggggcg atggcgcgga
     2461 tcaaccagcg cccgatcatc ttcccctatt cgaaccccac ctcgcgttcc gaatgcagcg
     2521 ccgaagaggc ctatcgctgg tccgatggcc gcgccgtttt tgccagcggc agtcccttcc
     2581 caccggtcga gatcgccggc cggcatttcg t
//
LOCUS       DATCWM010000365         2311 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_213240, whole genome shotgun sequence.
ACCESSION   DATCWM010000365 DATCWM010000000
VERSION     DATCWM010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2311
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_213240"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            203..739
                     /locus_tag="VIQ50_07015"
     CDS             203..739
                     /locus_tag="VIQ50_07015"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY9360165.1"
                     /translation="MALSADVRRVVTTIDSNDKAVVLFDGATPHKKVRPQTQTVSRLL
                     WVTDQTPADLSGSADRAAIEIGIMPPRGGTVFRIVEFPPETAEARRLDSDAMHSSLGD
                     GAPKRGLPPRHPAMHRTRTVDYAVVMTGEIDMLLDDSEIHLKAGDVLVQQGTNHAWVN
                     RGPEPCRIAFVLVDAKEP"
     gene            813..1676
                     /locus_tag="VIQ50_07020"
     CDS             813..1676
                     /locus_tag="VIQ50_07020"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEY9360166.1"
                     /translation="METARSEIKFPLPALGVRPLSPALGAEILGIDLRDDIDAQVFAQ
                     IRNAWHQNLVIVLRGQNMSEEDQVRFAEKFGPPAVIHTKQFVRNHPAVMLISNIREDG
                     KPIGALPDGEMHFHTDQCHQERPAMASMLYALEVPRAGGNTLFANGYTAYETLPPEIK
                     RRIDGRKALNAYDYETAATKRGTRLTQSVPSYAHPVVRTHPATGRKALYVNRLMTVRI
                     EGLPAQESDNLLAMLFDHQERREFIYEHVWRVGDLVIWDNRCTLHARTDFSPDERRLM
                     RRVTILGEKPL"
     gene            1747..>2311
                     /locus_tag="VIQ50_07025"
     CDS             1747..>2311
                     /locus_tag="VIQ50_07025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360167.1"
                     /translation="MIGREEDPAFLYFPANYRWSMGLLICLGAAPWTGIEIDEVHRVG
                     RALEDHVGDDRVWFEEWTGMGDKIAARGRDAQAKGHGLTAASCFMRATRYYQTGERFI
                     HPRSERSMAIYAASVELFKAAAAIIRHPRIEPVEVPYDGTSLPALLVHPDPEAAGSRP
                     APCMVFFDGFDVTKELQYGYGIPDLAAR"
BASE COUNT          435 a          775 c          719 g          382 t
ORIGIN      
        1 ccggctcccg ctgtcgcgcg cggtctggcg cagcccgcat ctcatgggtt gaactgcccc
       61 gcctcgttct gcaaacgatc cagaagccag gcatcgccgg caaagccgat gcgcgacggc
      121 cccccggctt gcacagccaa gcccgacggt gacagattta tctccttggc tatttcgcag
      181 agcgccggga ggaaacgaga tcatggcttt gagcgcagac gttcgccgtg tggtcaccac
      241 gatcgacagc aacgacaagg ccgtggtgct cttcgacggc gccacgccgc acaagaaggt
      301 gcggccgcag acgcagaccg tctcgcgcct gttgtgggtg acggatcaga cgccggccga
      361 tctttccggt agcgccgacc gcgccgcaat cgagatcggc atcatgccgc cgcgcggcgg
      421 taccgtgttt cgtatcgtcg aattcccgcc ggaaacggcg gaggcaaggc gcctcgactc
      481 cgacgccatg catagcagcc tcggtgatgg cgcgcccaag cgcggattgc cgccacggca
      541 tccggccatg catcgcacgc gcacggtcga ctacgccgtc gtgatgacag gcgagatcga
      601 catgctgctc gacgactcgg aaattcacct caaggccggt gacgtgttag tgcagcaggg
      661 caccaatcac gcctgggtca atcgcggccc cgaaccctgc cgcatcgctt tcgtcctcgt
      721 cgacgcgaag gagccttgag catcgacgct cccgcggatc ataatcgtac caagccaatc
      781 acggcgcaga ccgcgcgcga tggagcacaa ggatggaaac tgctcgcagc gagatcaagt
      841 ttcctctgcc cgcgcttggc gtgcggccgc tgtcgccggc actgggcgcg gagattctgg
      901 gtatcgacct gcgcgatgac atcgatgcgc aggtcttcgc gcaaattcgc aacgcctggc
      961 accaaaacct cgtcattgtg ctgcgcggtc agaacatgag cgaggaggac caggttcgct
     1021 tcgcggaaaa attcgggccg ccggcggtga tccataccaa gcaattcgtg cgcaaccatc
     1081 ccgcggtgat gctgatctcc aacatccgcg aggacggcaa gccgatcggt gccctgcctg
     1141 acggcgagat gcattttcat accgatcagt gccaccagga acggccggcg atggcctcga
     1201 tgctctatgc gctcgaggtg ccccgtgcgg gcggtaacac attgttcgcc aacggctaca
     1261 cggcctatga aaccttgccg cctgagatca agcggcgcat cgacggccgc aaggcgctca
     1321 atgcgtacga ctatgaaacg gcggcaacga agcgcggcac gcggctgacg cagagcgtcc
     1381 cctcctacgc gcacccggta gtgcgcaccc atcccgcgac cggacgcaaa gcgctttacg
     1441 tcaatcggtt gatgacggtg cggatcgaag gcctgcccgc ccaggagagc gacaacctgc
     1501 ttgccatgtt gttcgaccac caggagcgcc gcgaattcat ttacgagcac gtctggcgtg
     1561 tcggcgatct cgtgatctgg gacaatcgct gcacgctgca tgcacgcacc gacttcagcc
     1621 ccgatgagcg gcggctgatg cggcgggtga ccatcctcgg cgaaaagccg ttgtgaccag
     1681 ttcgtgccgc gcatgcgacg cagacatgag cgccgcagct cgcttgcctt gaagtaggag
     1741 caacaggtga ttggccgcga agaagacccc gcgttccttt attttcccgc caactaccgc
     1801 tggtccatgg gcctgctcat ttgcctcggc gccgcgccat ggaccggtat cgagatcgac
     1861 gaggtgcatc gcgtcgggcg cgcgctcgag gaccacgtcg gcgacgaccg cgtctggttc
     1921 gaagaatgga ccggcatggg ggacaagatc gctgcacgcg gccgcgacgc gcaggcgaaa
     1981 ggacacgggc tcaccgcggc gtcgtgcttc atgcgcgcga cccgatatta ccagaccggc
     2041 gagcgtttca tccacccgcg ctccgagcgc agcatggcca tctacgccgc gtcggtggaa
     2101 ctgttcaagg ccgccgccgc catcatccgc catccccgca tcgaaccggt agaggtccct
     2161 tacgacggca cgagcctgcc ggcgctgctc gtgcatccgg atcccgaggc ggccggatcg
     2221 cgaccggcgc cgtgcatggt gttcttcgac ggcttcgacg tcaccaagga gctgcaatac
     2281 ggctacggca ttcccgacct cgccgcgcgc g
//
LOCUS       DATCWM010000366         5176 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_154008, whole genome shotgun sequence.
ACCESSION   DATCWM010000366 DATCWM010000000
VERSION     DATCWM010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5176)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5176)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5176
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154008"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..298)
                     /locus_tag="VIQ50_07030"
     CDS             complement(<1..298)
                     /locus_tag="VIQ50_07030"
                     /inference="COORDINATES: protein motif:HMM:NF013508.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360168.1"
                     /translation="MPTADLSVAMDDGKTTVVPGTTDTYTITVTNNGPDTLSSLILSD
                     AIPPALANGLVVFTPSVGTYDVVTHTWSGLSLASGQRVSFTVSGTIDPTATGSLI"
     gene            549..1724
                     /locus_tag="VIQ50_07035"
     CDS             549..1724
                     /locus_tag="VIQ50_07035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY9360169.1"
                     /translation="MFVAFFHELKTAGVPVTLREYLTLMEAMEKDLAGRRVEDFYYLA
                     RTALVKDERNLDKFDRVFGHVFKGLELMSEALSAEIPAEWLKKLAEKYLTEEEKKQIE
                     AIGGLDKLLELLRQRMREQKGRHQGGKKWIGTAGTSPFGAYGYNPEGVRIGQDEDRNF
                     RAVKVWDRRDFKDLDDQVELGTRNIKIALRRLRRFARTGAPEELDLDGTIKGSAHKGY
                     LDILMRPERHNAVKVLLFFDVGGSMDWHIKATEELFSAARSEFKHMEHFYFHNCLYER
                     VWKENRRRFEDTTPTWDVLHTYPHDYKVIIVGDASMSPYEIVAPGGSVEHFNEETGAI
                     WMERVARTYPACVWLNPVAERDWDYTQSIRIMRQLMGGRMYPLTLDGLDKAMRELVR"
     gene            complement(1861..2673)
                     /gene="lepB"
                     /locus_tag="VIQ50_07040"
     CDS             complement(1861..2673)
                     /gene="lepB"
                     /locus_tag="VIQ50_07040"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: protein motif:HMM:TIGR02227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEY9360170.1"
                     /translation="MLTLLTPGLGHLYLGQARRGVTLFILVIIADTLLMFAMMGVLAR
                     FWMFAVSGGLLVGLWLYIMVDAISRAYRMRDVPHQRYKRWTTYAGAFALACLIFAGPC
                     IYAVHAKSSGRLLWLNAASPSMEPTLRMGEYFLADATYYRGRHPSRGEVAVYVHPKQE
                     QVHYIKRIVAIEGDRIAIKGGRAIVNGMTVEEPYVDAGDPQARFANEAEIRVPLGYVY
                     MLGDNRDNSVDSRDRIAHGPVPIGNLIGRVTDIAISRHLARMGRWIGTPSNY"
     gene            complement(2948..3355)
                     /locus_tag="VIQ50_07045"
     CDS             complement(2948..3355)
                     /locus_tag="VIQ50_07045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360171.1"
                     /translation="MIYATALTCGVLAALAVEIYLAGAGFDLASMWREGTFGGARELR
                     TTGPWWAVAGIAFAASWVTAAALSRFPPPWRRLRPLRWVAGAALVLLLAQVGHPSAAP
                     EGVGPGVHLAANLAALVIAAGMGLLGAYVAVRR"
     gene            complement(3488..3874)
                     /locus_tag="VIQ50_07050"
     CDS             complement(3488..3874)
                     /locus_tag="VIQ50_07050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360172.1"
                     /translation="MSYSRIGHRAKGLLVVAALAGAAAFPALSGAEAGPGYDGLWSVV
                     IVTKSGQCDAAYRYPVRITNGSLGNAGTTPINISGKVGKNGAVVVNVSAGDKSAVGKG
                     HLAGASGAGSWSGGSCSGIWEAERRG"
     gene            4096..4494
                     /locus_tag="VIQ50_07055"
     CDS             4096..4494
                     /locus_tag="VIQ50_07055"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEY9360173.1"
                     /translation="MNLLENINSRPLPLAQLMGITFTHAEPDKVIARMVVRPDLCTLG
                     HTIHGGSAMAFADTTGGAATLINLPADAKGTTAIESKTNFVGAAKEGSTVIATAVPLH
                     RGRRTQVWQTRLETEEGRLVALVTQTQLIL"
     gene            complement(4495..>5176)
                     /locus_tag="VIQ50_07060"
     CDS             complement(4495..>5176)
                     /locus_tag="VIQ50_07060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360174.1"
                     /translation="VNCKPAAQESPAGTLRQLAALISQSPRVATPRGEIRSLKTRRLE
                     KAWCVHERLRLGRKRQMTCTSDTSDAGLWHALNRLETDYWWDVDLNGGRHAHEFYLPD
                     GLYVVGHNRFAGHEQIRTFYAWRARRGPMTSRHLINNLKVSATDTDHAGFLAALSLFR
                     ANGPAPVQRTPSPCLIADVIGECVRAEDGTWRFRSQVLRPVFVGSDRPLALSIDAQFL
                     SRQCERTA"
BASE COUNT          974 a         1635 c         1670 g          897 t
ORIGIN      
        1 tgatgagcga gccggtcgcg gtcggatcga tcgtgccgct gaccgtgaag ctcacgcgct
       61 ggccgctcgc cagactcagc ccgctccacg tgtgggtgac cacgtcgtat gtcccgactg
      121 agggagtgaa gacgacgagc ccattcgcca gggcgggggg gatcgcgtcg ctcaggatga
      181 ggctgctgag cgtatccggc ccgttgttgg tgacggtgat cgtgtaggtg tcggtggtgc
      241 ccggcacgac ggtggtcttg ccgtcgtcca tggcgaccga caggtcggcc gtcggcatgg
      301 tatagcctcc cgctcgccga agacgtcaaa cgtccggcgc gtccagtctc tgtcagccaa
      361 attggtgctg gtgtcagggg cgtggcgccc gacagtgccc accagcttcg tgcagcgtat
      421 cagctttcga agatcctcga aagccacttt aatgtgacgg tcgtatatcc atctggcagg
      481 cgttgcatga ccgaagctac atcggttgaa tctcaagaag ttggtgaacc cttaagatcg
      541 ctaacaccat gttcgtcgcc ttcttccacg agctgaaaac cgccggcgtg ccggtgacct
      601 tgcgcgaata cctcaccttg atggaggcga tggagaagga tctcgccggc cgccgggtcg
      661 aggacttcta ctatcttgcg cgcacggcgc tggtgaagga cgagcgcaac ctcgacaagt
      721 tcgaccgcgt gttcggccac gtgttcaagg ggctcgagtt gatgagcgag gcactcagcg
      781 ccgagattcc tgcggaatgg ctcaagaagc tcgcggagaa atatctaacc gaagaagaaa
      841 agaaacagat cgaggcgatc ggcgggctcg acaagctgct cgagcttttg cgccagcgca
      901 tgcgcgagca aaaagggcgc catcagggcg gcaagaaatg gatcggcacc gccggcacct
      961 cgccgttcgg cgcctacggc tacaatcccg aaggcgtgcg catcggccag gacgaagacc
     1021 gcaacttccg cgcggtgaag gtctgggacc ggcgcgactt caaggacctc gacgaccagg
     1081 tcgagctcgg cacccgcaac atcaagattg cgctgcgccg cttgcgcagg ttcgcgcgca
     1141 ccggcgcgcc cgaggagctc gatctcgacg gcacgatcaa gggcagcgcc cacaagggct
     1201 atctcgacat cctgatgcgg ccggagcggc acaacgcggt gaaggtcctc ttgttcttcg
     1261 acgtcggcgg atcgatggat tggcacatca aggccaccga ggagctgttc tcggccgcgc
     1321 gcagcgagtt caagcacatg gagcatttct acttccacaa ttgcctctac gagcgggtgt
     1381 ggaaggagaa ccgccgccgc ttcgaggaca cgacgccgac ctgggacgtg ctgcacacct
     1441 atccgcacga ttacaaggtg atcatcgtcg gcgacgcctc gatgtcgccc tacgagatcg
     1501 tggcccccgg cggctcggtg gagcatttca acgaggagac cggcgcgatc tggatggagc
     1561 gcgtggcgcg aacctatccg gcgtgcgtgt ggctcaatcc ggtggcggag agagactggg
     1621 actacacgca atcgatccgc atcatgcgcc agctgatggg cgggcggatg tatccgctga
     1681 cgctcgacgg cctcgacaag gcgatgcggg aattggtgcg gtagacgtcg cttccgtcat
     1741 tgccgggctt gacccggcaa tccatcttct ttgcgaaact ctttttgcga agaagatgga
     1801 cccgcgggtc aagcccgcgg gtgacctgtc ggcgttcaat caatgcgccg gaaaaatgcg
     1861 ctaatagttg ctcggcgttc cgatccagcg gcccatgcgg gccaagtgcc gcgagatggc
     1921 gatatcggtg acgcgcccga tcaggttgcc gatcggcacc gggccgtggg caatccggtc
     1981 gcggctgtcg acgctgttgt cgcgattgtc gcccagcatg tacacatatc cgagcggcac
     2041 ccggatctcc gcttcgttgg caaagcgcgc ctgcggatcg ccggcgtcga cgtagggttc
     2101 ctcgaccgtc atgccgttga cgatggcgcg gccgcccttg atggcgatgc ggtcgccctc
     2161 gatcgcgacg atgcgcttga tgtagtgcac ctgctcctgt ttggggtgca cgtagaccgc
     2221 gacctcgccg cggctcggat ggcggccgcg gtaataggtg gcgtcggcga gaaaatattc
     2281 gcccattcgc agcgtcggct ccatgctcgg actggcggcg ttcaaccaaa ggagccggcc
     2341 ggacgacttg gcatgcacgg cataaatgca gggaccggcg aagatcaggc aggcgagcgc
     2401 aaacgcgccg gcataggtcg tccatcgctt gtagcgctgg tgggggacgt cgcgcatgcg
     2461 ataggcgcgc gagatcgcgt cgaccatgat gtagagccac agcccgacga gcagcccgcc
     2521 gctcaccgcg aacatccaga accgcgccag cacgcccatc atggcgaaca tgagcaaggt
     2581 gtcggcgatg atcaccagaa taaagagtgt cacgccgcgg cgggcctgcc cgagataaag
     2641 gtggccgagc ccgggcgtta gcagggtcag caaggccgtc acccacggcg aggggccgcg
     2701 tctttctttt gctgggttgt ttgcgtgggc cggcgcgtag tcggcaaaag ccatccactt
     2761 ctccgaattc gcccccgcgc gacccgaccg tgccgagggc gcacccctgt gtgactgtta
     2821 gtctcatcag caacggttaa ggttcgagcc ggcgtgccga ttctttgagc gcgctacaac
     2881 tgcaagagtg gcgcctggac ggcggctcga tctctggttg tagtgcctgg cccgggaatt
     2941 cgcccgttca gcgccttacg gcgacatagg ctcccagcaa gcccatccca gcggcgatga
     3001 caagggcggc caagttcgcc gccagatgca cgcctgggcc tacgccctcc ggcgcggcgc
     3061 tgggatgacc gacttgcgcc aaaagcagca cgagggcggc gccggcgacc catcgcagcg
     3121 ggcgcaaccg gcgccagggt gggggaaagc ggctcagcgc cgccgcggtt acccagctcg
     3181 ccgcaaaggc gatgccggcg accgcccacc aggggcccgt cgtgcgcagc tcccgcgcgc
     3241 cgccgaatgt accttcccgc cacatgcttg cgaggtcgaa gccggcgccg gccaagtaga
     3301 tctccactgc aagcgcggcc agcactccac aggtcagcgc ggtcgcgtag atcaaggccg
     3361 gcggtagcgc gatagaggaa aggtctcgcc tgggcgattg catgcggacc gtgccggaat
     3421 gatggaagcg acggatgccc gggcgggccc gggcatcact tggcgctagc gcagaaagct
     3481 taggggatca accgcggcgc tcggcttccc aaattcccga gcaggagccg ccgctccagg
     3541 agcctgcgcc gcttgcgccg gcgagatgac ctttgccgac cgcgctcttg tcgccggcgc
     3601 tgacgttgac gaccacggcg ccgttcttgc ccaccttgcc cgagatgttg atgggcgtgg
     3661 tgccggcatt gccgagactg ccgttggtga tgcgcaccgg ataacgatag gcagcgtcgc
     3721 actggccgct cttggtcacg atcacgacgc tccagagtcc gtcgtagccc gggccagcct
     3781 cggccccgga aagcgcggga aacgcggctg cgccggcaag cgccgccacc accaataggc
     3841 ccttggcccg gtggcctatt cgcgaataac tcatggtagc cccctcttgc ttccgtgccg
     3901 ggcgctgccc cctcaatccc gggcgaaacg gcaccgaatc cagcgatcca gaatgcgcca
     3961 ccccgttagt cgcagccacc gcgcggttgg ttcaaaccga acctcatcgc aagcgacaag
     4021 cgcgctcttt accctccccc gtgtgcggag ggcatgggcc gccttcggcc gcctttttag
     4081 cgcaaaggaa aatccatgaa cctgctcgaa aacatcaact cgcgcccgct tccgttggcc
     4141 cagttgatgg gaattacgtt cacgcacgcc gagcccgaca aggtcattgc cagaatggtc
     4201 gtgcgtcctg atctttgtac tctaggccat acaattcatg gcggcagtgc catggcgttc
     4261 gctgacacga cgggcggtgc agcgacgctc ataaatcttc ctgcagatgc caagggcacg
     4321 accgctatcg aaagcaaaac gaacttcgtg ggggccgcca aagagggctc gaccgtgata
     4381 gccacggctg tgcctcttca tcgcggacgc cgaacacagg tctggcaaac gcgattggaa
     4441 accgaagagg gaagactcgt ggcgttggtc acccagacac aactgattct ttgattaggc
     4501 ggtacgctcg cactgcctag acagaaactg tgcgtcgatc gagagcgcga gcggacggtc
     4561 gctgccgacg aacacaggcc gcagtacttg ggaccggaag cgccaagtcc cgtcctcagc
     4621 acgcacgcac tcgccgatca cgtcggcgat caggcacggc gagggtgtgc gctgcaccgg
     4681 cgcagggccg ttcgcccgaa acaggctgag tgccgccaaa aaacctgcgt ggtcggtgtc
     4741 cgtcgctgag accttcaggt tgttaatcag gtgccgggag gtcatcggcc cgcgccgagc
     4801 gcgccatgca tagaacgtgc ggatctgctc gtgtccggcg aacctgttgt ggccgaccac
     4861 atacaaccca tccgggagat aaaactcgtg ggcatggcgc ccgccgttga gatcgacatc
     4921 ccaccagtag tcggtttcga gccggttgag ggcgtgccac aaccctgcat cggaggtgtc
     4981 actcgtgcat gtcatttgcc gcttccttcc caggcgcagc cgttcgtgca cgcaccacgc
     5041 cttttccaga cgtcttgttt tcaaggatct aatctcgccg cgcggtgtgg ccactcgcgg
     5101 cgattgggat atcaacgcgg ccaattggcg cagagttccg gcaggcgact cctgcgctgc
     5161 gggcttgcaa ttcacg
//
LOCUS       DATCWM010000367         2144 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_13426, whole genome shotgun sequence.
ACCESSION   DATCWM010000367 DATCWM010000000
VERSION     DATCWM010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2144
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13426"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1302
                     /locus_tag="VIQ50_07065"
     CDS             <1..1302
                     /locus_tag="VIQ50_07065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     ATP-binding protein/permease"
                     /protein_id="HEY9360175.1"
                     /translation="IGRPALFQSAQSYLAFCVAMLALVGYVVWHLSDTRLGRAMRAVR
                     DNELAAGVVGIDVFRTKVSAFALSAVLGGLAGGLFAGGFAYVSPDQFSFAESVVFLTM
                     SLLGGVASPIGSAIGTGLLILIPEWLRFLKSVPGLYLAIYGLSVILIIRYMPDGIWGF
                     VNIATERWRAKAKVRATGPALQLAPATVGGAMVLEVKGLAKYFGGLKAVDDVDIEVRR
                     GGVHALIGPNGSGKTTTLNVLSGLYKATAGRVILDGTDVTDMPPHQRATAGLGRTFQN
                     IRLFRSMTALENVVIGAERPGNTLIGGGREDALNERAMSALTFVGLGSRANELISSFS
                     YGHQRLIEIARALAANPTLLLLDEPAAGLNSSEKLELHELLKRIAAQGLTILIIDHDM
                     TLVSEAAQHITVLNFGRRIADGESMGVLRHPDVVSAYLGTE"
     gene            1302..2030
                     /locus_tag="VIQ50_07070"
     CDS             1302..2030
                     /locus_tag="VIQ50_07070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015687506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9360176.1"
                     /translation="MPLLEINDLIVLYGEIEALRGVSISVDEGRVVTLLGANGAGKST
                     TLRAISGLAKPAAGEIVFDGKSIAGLGPEAIVRLGISHVPEGRRIFPGLSVKENIMLG
                     ASNRRIAKSALSREADAMFDLFPDIRSFSNALGWTLSGGQLQMVAVARGLMAKPRLLL
                     LDEPSLGLAPVIVQAVFRIISEIRRNSTVLLVEQNARMGLSVADHGYVLETGRIVLGG
                     KPDELWGNEAIRAAYLGGHARASA"
BASE COUNT          362 a          644 c          682 g          456 t
ORIGIN      
        1 atcggccggc cggctctgtt tcaatcggcc caatcgtatc tggctttctg cgtcgccatg
       61 ctggcgctgg ttggctatgt cgtctggcat ttatcggata cgcggcttgg gcgcgccatg
      121 cgcgcagtgc gcgataacga acttgcagcc ggcgttgtcg gcatcgatgt cttccgcacc
      181 aaggtttccg cctttgcgct cagcgcggtg ctgggcgggt tggccggcgg ccttttcgcg
      241 ggcggtttcg cttacgtcag cccggatcaa ttttcgtttg ccgagtcggt cgtgttcctc
      301 acgatgtcct tgctcggcgg cgtcgcctcg ccgatcgggt cggccatcgg caccggtttg
      361 ctgatcctga ttccggaatg gctgcggttt ctgaaaagcg ttcccgggct ttatctcgcg
      421 atctacggtt tgtccgtcat ccttatcatc cgctatatgc ccgacggcat ctggggattc
      481 gtcaacatcg caaccgagcg ctggcgcgcc aaggcaaagg tgcgtgccac gggtccggcg
      541 ctgcaattgg ctccggcgac cgttggtggc gccatggttc tggaggtcaa aggtctcgcc
      601 aaatatttcg gcggcctgaa ggctgtcgat gatgtcgata tcgaggttag gcgcggcggc
      661 gtccacgcgc tgatcgggcc aaacggctcc ggcaagacca cgacgctgaa tgtgctttcc
      721 ggcctctaca aggccacggc gggcagggtg atcctcgacg gcaccgacgt gaccgacatg
      781 ccgccgcatc agcgtgcgac cgccgggctg ggacgtacgt ttcagaacat ccggctgttc
      841 cgctcgatga ccgcgctgga gaatgtcgtg atcggcgccg agcggccggg taatacgctg
      901 atcggcggag gtagagaaga cgcgcttaac gagcgagcga tgtcggcgct gacctttgtg
      961 ggcttaggca gccgcgccaa cgaattgatc tctagttttt cctatgggca tcagcgattg
     1021 attgagatcg cgcgcgcact cgccgccaat ccgaccttgc ttttgcttga cgaaccagcg
     1081 gccggcttga actcgagcga gaagctcgaa ctccacgagt tgctcaagcg catcgccgcc
     1141 cagggcctga ccatcctgat catcgatcat gacatgacgc tggtctccga ggcggcccag
     1201 cacatcaccg tgctcaattt cgggcgccgc atcgcggacg gcgaatccat gggggtgctg
     1261 cgccaccccg acgtcgtctc cgcatatctc gggaccgaat aatgccgttg ctcgaaatca
     1321 acgacctgat tgtgctctat ggcgagatcg aagctttgcg cggggtctcg atcagcgtcg
     1381 atgagggacg ggtggtcacg ctgctcggcg ccaacggtgc cggcaaatcg acgacgctgc
     1441 gggcgatatc gggactggca aagccggcgg caggcgaaat tgtcttcgac ggcaagtcga
     1501 tcgctggcct tgggccggag gccatagtgc gtctcggcat ctctcacgtt cccgaaggcc
     1561 ggcggatttt tccaggtctg tccgtgaagg aaaacatcat gctcggcgcg tcgaaccggc
     1621 gcatcgcgaa atccgccctg tcgcgcgaag ccgacgccat gttcgacctg tttccggaca
     1681 tcaggtcgtt ttccaatgcg ctcggctgga ccttgtcggg cgggcaattg cagatggtcg
     1741 cagtcgcgcg cggcctgatg gcgaagccgc ggctgctgct gctggatgag ccttcgctcg
     1801 gactcgcgcc tgtcatcgtg caggcggtat tccggatcat ttcggaaatc cggcgcaaca
     1861 gcacggtctt gctggtcgag caaaacgccc gcatgggact ttcggtcgcc gatcatggtt
     1921 acgttctgga aaccggccgc atcgtgctgg gcggcaaacc cgacgagttg tggggcaacg
     1981 aagccattcg cgccgcttat ctcggcggtc acgctagagc aagcgcttga ggtagcgact
     2041 gatcatggtc actgtgcagg ttcaaaatct gatcgacttc gttgcggaag ttttcgccca
     2101 tgcggactcc tcgcctgaag aagccaggcg cattgcgacg tacc
//
LOCUS       DATCWM010000368         4064 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_234786, whole genome shotgun sequence.
ACCESSION   DATCWM010000368 DATCWM010000000
VERSION     DATCWM010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4064
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234786"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            259..576
                     /locus_tag="VIQ50_07075"
     CDS             259..576
                     /locus_tag="VIQ50_07075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360177.1"
                     /translation="MFPSAVLFAFGGTLLVADAVPTLDVEAGCRAAAKMGSSLSLDES
                     LRQCLSDEKSARGELERQWSEFPPALRQRCVGTTETGGDPSYVEVLVCLQMGRDAAQM
                     EKR"
     gene            713..1990
                     /locus_tag="VIQ50_07080"
     CDS             713..1990
                     /locus_tag="VIQ50_07080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012589673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEY9360178.1"
                     /translation="MTSTNASARVAPLTGKHESPPGGKPAPARSPKAIRRQFVSPLLK
                     SHRELQRPPFDCIALVLQGGGALGAFQAGVYQALAEANLKPDWIAGISIGAINAALIA
                     GNAPEVRLEKLRAFWEQVTTQLLFDPFGIGHYWLRGDLGHVFLNGLRAGATILEGAPG
                     FFKPRLVPPYLSPPGTIEATSWYDTAPLRSTLERLVDFDRINSGEMRFSVGAVNIRTG
                     NFVYFDSTTHTIRPEHVMASGALPPGCPAVEVDGELYWDGGLVSNTPLQWVVAGDTRQ
                     DTLAFQVDLWSARGDLPSDLNDVTSRQKEIQYSSRTRANTDQFEEIQCVRKALANVLE
                     NVPSEILDSEDGKLLQSVADRNVYQIVHLIYRSKNYEVQSKDYEVSRNSMIDHWNAGY
                     SDATRTLRHPEALQRPVNGPGVATFDVAVDGRE"
     gene            2036..2812
                     /locus_tag="VIQ50_07085"
     CDS             2036..2812
                     /locus_tag="VIQ50_07085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetate decarboxylase"
                     /protein_id="HEY9360179.1"
                     /translation="MKEAEVKARAFAMPLTSPAYPPGPYRFVDREFMIITYRTDPDKL
                     RAVVPEPLEVDEPLVKYEFIRMPDSTGFGDYTETGQVIPVRFRGRKGGYSHCMFLNDE
                     PPIAGGRELWGFPKKLANPTLHVEIDQVVGTLDYGPVRVVTATMGYKHKVADAASLAA
                     PNFLLKIIPHVDGSARICELVEYYLEDVTLKGAWTGPGAISLTPHALAPVAELPVLEV
                     VSAVHLVCDLTLGLGKVAHDYLASPAKRESAPKPATAGVA"
     gene            2814..3593
                     /locus_tag="VIQ50_07090"
     CDS             2814..3593
                     /locus_tag="VIQ50_07090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012760101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyrate dehydrogenase"
                     /protein_id="HEY9360180.1"
                     /translation="MRLKDKVAIVTGAASGIGKEIAKSFAREGARVVIADLNQKAADA
                     AAAELGDARKALGVVMDVTNEEQVEAGVARTVEQFGKIDVLVSNAGIQIVAPLDQFKF
                     ADWKKLLSIHLDGAFLTTRAVLQRMYKQGSGGSIIYMGSVHSKEASVLKAPYVTAKHG
                     LIGLAKVVAKEGAKHGVRANVICPGFVRTPLVDKQIPEQAKELGISEAEVIKNVMLKD
                     TVDGEFTTVADVAETAVFFAGFESNALTGQSLVVTHGWFMQ"
BASE COUNT          781 a         1301 c         1291 g          691 t
ORIGIN      
        1 ctttcacggc cacgaccgca aggcgcgacg gtgcgctcac tctatcgtga aaccgttgac
       61 cgccatgggg gctcgggtta tgccgaggct cgaggggtaa gcgaggcaat tctcgagttg
      121 ccgacgatca ctgcggcagg attatgcagg ccgctgcgat cgatcgccga caagcgccgg
      181 gtggggcgga catggatgcc ggcgtcgcgc tggcacacga ttgatcgcca ttcgagcgcg
      241 cgcggcggga gagcccagat gtttccatcg gcggtgcttt tcgcgttcgg cggcacgctc
      301 ctggtcgccg acgccgttcc cactctcgac gtcgaagccg gctgccgcgc cgcagcgaag
      361 atgggcagca gcttgagctt ggacgagagc ctgcggcagt gtctttccga cgagaaaagc
      421 gcgcgcggtg aactggaacg gcagtggtcg gaattcccgc ccgcccttcg ccagcgctgt
      481 gtcggcacca ccgaaaccgg cggcgacccc agctacgtcg aagttctcgt ctgcctgcag
      541 atggggcggg acgcggcgca gatggaaaag cgttagaaca ctgtcattga aattcagcaa
      601 catcaggcaa acgctcattc ccgaagggaa taatcaataa tccggcacga gcggtgctcc
      661 gtcggggcca gcagttttag agcagcgtac acatacaggg atcatcgttg gcatgacctc
      721 cacgaacgct tcggctcgcg tggcgccgct gacggggaaa cacgagagcc cgcccggggg
      781 caaacccgcc cccgcgcggt cgcccaaagc catcaggcgg caattcgtca gcccgctgct
      841 caaaagtcac cgggaattgc aacggccgcc cttcgattgc atcgccttgg tcctgcaagg
      901 gggcggcgcg ctcggcgcct ttcaggccgg cgtgtaccag gccctcgcgg aagcgaacct
      961 gaagcccgac tggattgccg gaatttcgat cggcgccatc aacgccgcgc tgatcgccgg
     1021 caacgcgccc gaagtgcggc tcgaaaagct gcgcgccttt tgggagcaag tcaccacgca
     1081 gctgctgttc gaccccttcg gcatcgggca ctactggctg cgcggcgatc tcggccacgt
     1141 tttcctcaat ggattgcgcg ccggagcaac catcctcgaa ggcgctcccg gctttttcaa
     1201 gccgcgcctc gtgccgccct atctctcgcc gccgggcacg atcgaggcga ccagctggta
     1261 tgacacggcg ccgttgcgca gcacgctcga gcggctcgtc gatttcgacc gcatcaattc
     1321 cggcgagatg cgcttcagcg tcggcgccgt caacatccgc accggcaact tcgtctattt
     1381 cgattcgacc actcacacca ttcggcccga gcacgtcatg gcgagcggcg cgctgccgcc
     1441 cggctgtccc gccgtcgagg tggacggcga gctctattgg gacggcggtc tcgtgtcgaa
     1501 cacgccgctg caatgggtgg tcgcgggcga cacgcgccag gacacgctcg cgttccaagt
     1561 cgacctgtgg agcgcgcgcg gcgacttgcc gagcgatctc aacgacgtga cgtcgcgaca
     1621 aaaggaaatc cagtattcga gccggacgcg ggccaacacc gatcagttcg aagagattca
     1681 atgcgtccga aaggcgctgg cgaacgtttt ggaaaacgtc ccgagcgaaa tcctcgattc
     1741 cgaggacggg aaactgctgc aaagcgtcgc cgaccgcaac gtctatcaga tcgtgcacct
     1801 gatctatcgg tcgaagaact atgaggtcca atccaaggac tacgaggttt cccgcaacag
     1861 catgatcgac cactggaacg ccggatatag cgatgcaacg cgcaccttgc ggcatccgga
     1921 agcgctgcag cggccggtga atggtcccgg ggtcgccacg ttcgacgtcg ccgttgacgg
     1981 ccgcgaatga agacgacatc gctcgatatc gactgaattc acaaaggagc acgacatgaa
     2041 ggaagcagag gtcaaggcgc gcgccttcgc catgccgttg acaagcccgg cctatccgcc
     2101 cggcccttac cgtttcgtcg accgcgaatt catgatcatc acctatcgaa cggacccgga
     2161 caaattgcgc gcggtcgtcc cggagcccct cgaagtggac gagcccctcg tcaagtacga
     2221 attcatccgc atgccggact ccaccgggtt cggcgactac accgaaaccg gacaggtcat
     2281 tccggtgcgc tttcgcggcc gcaagggcgg ctacagccat tgcatgttcc tcaacgacga
     2341 gccgccgatc gcaggcgggc gtgagctttg gggctttccg aaaaaattgg ccaacccgac
     2401 gctgcatgtc gagatcgacc aagtggtcgg aacgctggac tatggaccgg tacgcgtcgt
     2461 cacggcgacc atgggttaca agcacaaggt ggccgacgcc gcctcgctcg cggcgccgaa
     2521 ttttctgctc aagatcattc cgcacgtcga cggcagcgcg cgcatctgcg agctcgtcga
     2581 atattacctc gaggacgtga cgctcaaggg ggcgtggacc ggcccgggcg cgatctcgct
     2641 cacgccccat gcgcttgctc cggtcgcgga gctgccggtg ctcgaagtcg tctccgcggt
     2701 tcacctcgtt tgcgatctca cactcggcct cggcaaggtc gcccacgact acctcgcctc
     2761 gcccgcaaag cgggaatcgg cgcccaagcc ggccaccgcg ggagtagcgt gacatgcgcc
     2821 tcaaggacaa agttgccatc gtaaccggcg ccgccagcgg catcggcaag gagatcgcca
     2881 aatccttcgc gcgcgagggg gcgcgcgtcg tgatcgccga tctcaatcaa aaagccgcgg
     2941 acgccgccgc ggccgagcta ggcgatgccc gcaaggcgct gggcgtggtc atggatgtca
     3001 ccaacgaaga gcaggtggag gccggggtcg cgcgcacggt ggagcagttc gggaagatcg
     3061 acgtgctcgt gagcaatgcc ggcatccaga ttgtcgcacc gctcgatcaa ttcaagttcg
     3121 cggactggaa gaagctcttg agcatccatc tcgacggcgc gtttctcacc acccgcgccg
     3181 tcctgcagcg gatgtacaag cagggttcgg gcggaagcat catctacatg ggatcggtgc
     3241 actcgaaaga ggcctcggta ttgaaggcgc cttacgtgac cgccaagcac ggattgatcg
     3301 ggctcgccaa ggtggtcgcg aaggaaggcg ccaagcacgg cgtgcgcgcc aacgtcattt
     3361 gcccgggctt cgtgcgcacg ccgctggtcg acaagcagat ccccgagcag gccaaggagc
     3421 tcggcatttc ggaggccgag gtcatcaaga acgtgatgct caaggacacc gtggacggcg
     3481 aattcaccac ggtcgcggat gtagcggaga cggcggtatt ttttgccggc ttcgaaagca
     3541 acgccctgac cgggcagtcg ctggtcgtga cccacggctg gttcatgcag tgagcgctcg
     3601 cccgcaaacc tgctgacccg ttgcgcgccc gaacgggtta cagcccgtag ggtgcgcacc
     3661 cggcgcccgc cgacgtcaca atcctgccac gttgcggcgg cccaggcgcg cctgcccgcg
     3721 attcgtgcgg ataaatatgg cgagcagtgc cagatggtta gtctccgcac cgctggccgc
     3781 gagattgcgg cgcgctggtg gcacggaatt tgtttgccgc agcccccagg tttttgaacc
     3841 tttggccctc agccgcgact aatagacacg caagccatca gccgcccgcg tcagggagtg
     3901 gacaagagtg gatgcgactt tcagggcgag gtgcgtcatg aatgtacaaa gcagacattg
     3961 gctcgattac gaccccgtgg ccctggtgat cctggtcgtg ggtatcggcg cggtggcatt
     4021 gctcgcgctg agcatctaat ccgctcgctg tggctgggcc ggtg
//
LOCUS       DATCWM010000369         2637 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_207895, whole genome shotgun sequence.
ACCESSION   DATCWM010000369 DATCWM010000000
VERSION     DATCWM010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2637
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_207895"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..859)
                     /gene="gpmI"
                     /locus_tag="VIQ50_07095"
     CDS             complement(<1..859)
                     /gene="gpmI"
                     /locus_tag="VIQ50_07095"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046537 -
                     2,3-bisphosphoglycerate-independent phosphoglycerate
                     mutase activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HEY9360181.1"
                     /translation="MQKRRPVMLVVLDGWGWREEAADNAIRQARTPSFDRLWASCPHA
                     FLRTSGKDVGLPEGQMGNSEVGHLNIGAGRLVVQDLPRIDAAIASGDIDRAPALNELI
                     EAMRRSGGACHLIGLVSPGGVHSHQDHAAALANILVQASVPAVLHAFTDGRDTPPRSA
                     GEDIARLISALPRSVPVVTVSGRYYAMDRDKRWERVAKAYHAVADAEGPRFASAPAVI
                     ADAYAHETSDEFIVPAVVGDYRGMRDGDGVLCFNFRADRVREILSALLDPNFSGFPRR
                     RSIGVAGAAG"
     gene            complement(988..1869)
                     /locus_tag="VIQ50_07100"
     CDS             complement(988..1869)
                     /locus_tag="VIQ50_07100"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016841513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEY9360182.1"
                     /translation="MLSPDPICDREPLIGAAADYAVVRRAIAFVCERWRAQPEIDAIA
                     AAAGVSASELHHLFRRWAAITPKAFLQALTLEHARRLLRDSASVLDVSFEVGLSGPGR
                     LHDLFVTHEAMSPGEWKSGGDGLTMSYGFHPSPFGTALVMTTQRGLAGLAFADPGEEQ
                     VALADMKGRWPKANIVEDRAHTEPLARRIFDTGLWRADRPLRVVLIGTDFEVRVWETL
                     LKIPMGRAMTYSDIATKIGATRAARAVGAAVGKNPLSFVVPCHRVLGKDGALTGYHWG
                     LTRKRAMLGWESGRTAS"
     gene            complement(1950..2459)
                     /locus_tag="VIQ50_07105"
     CDS             complement(1950..2459)
                     /locus_tag="VIQ50_07105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014438788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2244 domain-containing protein"
                     /protein_id="HEY9360183.1"
                     /translation="MPPDNDLAREPTIFSAVLTPHRSLSRNGFLALMLVAGGVSLVTG
                     TTFLVVGAWPVFGFCGLDVLLLYWALKVSYRRATAYEQVTVTPSELTVRQVTHRGRIS
                     EWTLNPLWVRLDRVVHAEFGIERLFLVSRGQRLAIAGFLGPQEKESFALALSAALGEA
                     KRGPTRTVF"
BASE COUNT          484 a          863 c          867 g          423 t
ORIGIN      
        1 taccggcggc gccggcgacg ccgatgctgc gtcggcgagg aaagccgctg aagttcgggt
       61 cgagcaaggc cgacaggatc tcgcgcacac ggtcggcgcg gaaattgaag cacagcacgc
      121 cgtcgccgtc ccgcatcccg cgataatcgc cgaccaccgc cggaacgata aattcgtcgc
      181 tggtctcgtg cgcataagca tccgcgatga ccgcgggagc gcttgcaaat cgcggcccct
      241 cggcgtccgc gaccgcgtga taggccttgg ccacgcgctc ccagcgtttg tcgcgatcca
      301 tcgcgtagta tcgaccgctg accgtgacaa ccgggacgga tcgcggcagc gccgagatga
      361 ggcgcgcaat gtcctcccct gccgagcgtg gcggcgtatc ccggccgtcg gtaaaggcat
      421 gcaagactgc cggcactgag gcttggacga gaatgttggc gagcgcagcc gcgtggtcct
      481 gatgcgaatg caccccaccc ggcgacacca atccgatgag gtgacacgcg cccccactcc
      541 gtcgcatcgc ctcgatcagt tcgttgagtg caggcgcgcg gtcgatatcg ccactagcga
      601 tggccgcgtc gatgcggggc aagtcttgca ccacgagacg gccggcgcca atgttgagat
      661 gtccgacctc ggaattgccc atctgcccct ccggcaggcc gacatcctta cctgaggtgc
      721 gcaagaacgc gtgcggacag ctcgcccaga gacgatcaaa actcggagtc cgcgcttgcc
      781 ggatcgcatt gtcggcggct tcctcgcgcc agccccagcc gtcaaggaca accaacatga
      841 ccggacggcg cttttgcatc tgtccaagtc ctctgcgcct cgccggtgtt ggcgaagcgt
      901 gccaaccggc attcattgga tctttgtgtg ggattgcggt gccatcgtca accagcggct
      961 cgtttgcggg cgatcgcgac cgtgctttca gctagcggtt cggcccgact cccagcccag
     1021 catcgcgcgc ttgcgggtga gtccccagtg gtagccggtg agcgcgccat cttttccaag
     1081 cacacgatgg cacggcacca cgaacgagag tggattcttg ccgacagcgg cgccgacggc
     1141 gcgtgcggct ctggttgcgc caatcttcgt ggcgatgtct gagtaggtca tcgctcggcc
     1201 catgggaatt ttgagcagtg tttcccagac gcgcacctcg aaatcggtgc cgatgaggac
     1261 cacgcgcagc ggccgatcgg ctcgccacag gccggtatcg aagatgcgcc gcgccagtgg
     1321 ctcggtgtgc gcgcgatctt cgacgatgtt ggccttgggc cagcggccct tcatgtcggc
     1381 gagcgcgacc tgttcctcgc cgggatcggc gaatgctagg ccggcaagcc cgcgttgggt
     1441 cgtcatcacc agcgcggtgc cgaacggaga cggatgaaag ccgtaggaca tcgtgagccc
     1501 gtcgccaccc gatttccatt cgccgggcga catggcttcg tgagtgacga agagatcgtg
     1561 caaacggccc ggcccggaca ggccgacctc gaatgagacg tcgagcacgc tcgccgaatc
     1621 tcgcaacagg cggcgcgcgt gctcaagtgt gagcgcctga aggaaggcct tgggcgtgat
     1681 tgcggcccag cggcgaaaca gatggtgcag ctcgctggcg ctcactcccg ccgctgccgc
     1741 aatggcgtcg atctcgggtt gggcgcgcca gcgctcgcag acaaaagcga tggcgcggcg
     1801 cacgacggca tagtcggcgg cggcgccgat aagcggctcg cgatcgcaaa tcgggtcggg
     1861 ggagagcatg ttgggccctg gctcgatcgt gcgccccttc tacgctgggg cggaggttgc
     1921 gcccacccgc tttctgcgtg caatgctggt cagaataccg ttcgagttgg ccctcgcttc
     1981 gcctcgccaa gcgctgcaga caacgcaagc gcgaagcttt ccttttcctg cggccccagg
     2041 aaccccgcga tcgcaagccg ttggccgcgc gagacgagaa acagccgttc gatgccaaac
     2101 tccgcgtgga ccacgcgatc gagccggacc cagagcggat tgagcgtcca ttcgctgatg
     2161 cggccgcggt gagtcacctg acgcacggtc agttcggagg gggtaacggt gacctgttcg
     2221 taagccgtgg cgcgacggta gctgaccttg agcgcccagt agagcagcag aacgtcaagc
     2281 ccgcagaaac caaacactgg ccaagcgcca acgacgagga atgtcgtccc ggtgaccagg
     2341 ctgaccccgc cggccaccag catcaacgcc aagaaaccat tgcggctcag tgagcgatgc
     2401 ggcgtgagca ctgccgaaaa gatcgtgggt tctcgggcga ggtcgttgtc gggtggcatg
     2461 gagctcacta taccggaact atgccgcgca aaacacctcg caaggcagtc cgcagagtcc
     2521 ctcgcaaggc gaggcgaaga acggcacaga gcctgcgtca agcccgcgcg cacacggcgg
     2581 ccaagctcaa gagcccggcc acgcgttcgg cggccgacca cgcggccgct gccgggg
//
LOCUS       DATCWM010000370         3024 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_467059, whole genome shotgun sequence.
ACCESSION   DATCWM010000370 DATCWM010000000
VERSION     DATCWM010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3024
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_467059"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..712)
                     /locus_tag="VIQ50_07110"
     CDS             complement(<1..712)
                     /locus_tag="VIQ50_07110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9360184.1"
                     /translation="MSSAAQSASPVASRERAEGGAITTDIPARLDRLPWSRFHLLVVV
                     ALGVTWILDGLEVTIVGAIAPVLQNGQTLGLSAGDIGAAGSAYLIGAVVGALLFGWLT
                     DRFGRRLVFYVTLIVYLLGVLLTATSWSFWSFALFRAITGFGIGGEYAAINSAIDELI
                     PARYRGRVDLIVNGSFWLGAAAGAGASLLFLDPNLVAPNLGWRLGFAVGGILGLGILL
                     LRHYVPESPRWLVTHGWTR"
     gene            895..2256
                     /gene="hmgA"
                     /locus_tag="VIQ50_07115"
     CDS             895..2256
                     /gene="hmgA"
                     /locus_tag="VIQ50_07115"
                     /EC_number="1.13.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004411 - homogentisate 1,2-dioxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homogentisate 1,2-dioxygenase"
                     /protein_id="HEY9360185.1"
                     /translation="MNIQDQSRFDSRAGAPGLVPGYMSGFGNSFETEALAGALPIGRN
                     SPQQVKFGLYAEQLSGSAFTAPQEANQRSWLYRIRPTVKHSARYRKIDTGLIRTAPAA
                     REESDLPIGQVRWGPIPIPGEKLTFVEGLRTMTTAGDAETRAGMAAHVLLVTASMGNE
                     YFFDADGELLVVAQQNKLRFRTEFGVIEIEPGEICVIQRGMIFRVELVNGPARAYVCE
                     NYGGAFTLPYRGPIGANCLANPRDFLTPVAAYEDKEEASTLLVKWGGELYATEIGQSP
                     LDVVAWHGNYAPYKYDLRRFSPVGALLFDHPDPSIFTVMTAPSETPGTANVDFVIFPE
                     RWQVAENTFRPPWYHRNLMSEFMGLIYGVYDAKPQGFVPGGISLHNCMLPHGPDADAF
                     EHASNSELKPVKLADTMAFMFETRFPQRLTKYAAGLKERQDDYVDCWKGLRKHFDPKR
                     QRP"
     gene            2327..>3024
                     /locus_tag="VIQ50_07120"
     CDS             2327..>3024
                     /locus_tag="VIQ50_07120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9360186.1"
                     /translation="MSSRTALLTAILALSAVIVVENASAQNYPARPIHLIVPYPAGGG
                     TDFFARLVGQKMSELVGQPIVVENKPGAATNLGADFVAKAPPDGYTVLLGDVATYAAN
                     PSLYKKLPFDPAKDFAPVTLTARFLTVLVTNPAKLKANSVAELIEQAKSQPGKIDIAH
                     AGVGNPFHLAAVLFQQAAGIKLNEVPYRGAGPAVQGLLGGDVHMMFVDYATARSHIAA
                     GSLKALGVAALTPRP"
BASE COUNT          589 a          999 c          939 g          497 t
ORIGIN      
        1 ggcgggtcca gccgtgggtg acgagccagc gcgggctttc cggtacgtaa tggcgcagca
       61 gcaggatgcc gagcccgagg attccgccga cggcgaagcc gagccgccag ccgaggttgg
      121 gtgcgaccaa attcgggtcg agaaacagca gcgaagctcc ggctccagcc gccgcaccca
      181 gccagaagct gccgttgacg atgagatcga cgcgcccgcg atatcgcgcc ggaatgagct
      241 cgtcgatcgc cgagttgata gccgcgtatt cgccaccgat accgaacccg gtgatcgcgc
      301 ggaacaatgc gaagctccag aagctccagg aggtcgcggt caacaggacg ccgaggagat
      361 agacgatcaa cgtgacgtag aaaacgagcc gccggccgaa acgatcggtg agccagccga
      421 acagcagcgc gccgacaacc gcgccgatca aataggcgga gccggccgca ccgatatccc
      481 cggcagagag ccccagcgtt tgcccgttct gaagcaccgg ggcgattgcc ccgacgatgg
      541 tgacttcaag gccatcgaga atccaggtta ccccgagcgc caccaccacc agcaggtgga
      601 aacgactcca aggaagccga tcgagacgcg cgggaatatc ggtcgtaatg gcgccgccct
      661 ctgccctctc gcgagaagcc acgggcgaag cggactgagc ggcagaggac ataagataga
      721 ttctcgtcgc gggtacggtc ctgcaacttg gagcagctag cacgagttcc ccgagattgg
      781 aaatttgctg cgaatggccg gcatggagcg aagcgacgtc ggggattttc ccgcatttcg
      841 cgccacattg aattcgcgct acaaatgcgg cgtcccggcg agggaggatt ggccatgaac
      901 attcaggatc agtcgcggtt tgactcgagg gcaggcgctc ctggtctcgt ccccggctac
      961 atgtccggct tcggcaactc cttcgaaacc gaggcgcttg ccggcgcgtt gccgatcggg
     1021 cgaaattccc cgcaacaggt caaattcggc ctctatgccg agcaattgtc cggctcggcg
     1081 ttcaccgcgc cgcaggaggc gaaccagcgt tcctggcttt accgcatccg tcccacggtg
     1141 aaacattcgg cgcgttaccg gaaaatcgac acagggctca tccgcactgc gccggcggcg
     1201 cgcgaggaaa gcgatctgcc gatcggtcaa gtgcgttggg gaccgatccc gattcccggc
     1261 gagaagctca ctttcgtcga ggggcttcgc accatgacga cggcgggcga tgccgagacg
     1321 cgcgccggca tggcggcgca tgtgctgctc gtgaccgcat ccatgggcaa cgagtatttc
     1381 ttcgacgccg acggcgagct cctcgtggtc gcgcagcaga acaagcttcg cttccgcacc
     1441 gagttcggcg tgatcgagat cgagcccggc gagatctgcg tgattcagcg cggcatgatc
     1501 ttcagggtcg agctcgtcaa cgggccggcg cgcgcctatg tctgcgaaaa ctacggcggc
     1561 gcgttcacgc tgccttatcg cgggccgatc ggcgcaaatt gtctcgccaa tccgcgcgat
     1621 tttctcaccc cggtcgcggc ctacgaggac aaggaggaag cctcgacgct gctggtcaaa
     1681 tggggcggcg agctctacgc gaccgagatc ggccagtcgc cgctcgacgt ggtcgcgtgg
     1741 cacggcaatt acgcgccgta caaatatgat ctgcggcgct tctccccggt tggcgcgttg
     1801 ctgttcgatc accccgatcc gtcgatcttc accgtcatga ccgcgccgtc ggaaactccc
     1861 ggcaccgcca atgtcgactt cgtcatcttc ccggagcgct ggcaagtggc cgagaatacg
     1921 ttccggccgc catggtatca ccgcaacctg atgtcggaat tcatgggcct gatctacggg
     1981 gtctacgacg ccaagccgca gggcttcgtg cccggcggca tctcactgca caattgcatg
     2041 ctgccgcacg gaccggatgc agacgctttc gaacacgcga gcaacagcga gctcaagccg
     2101 gtgaagctcg ccgataccat ggccttcatg ttcgagaccc gcttcccgca gcgcctgacg
     2161 aaatacgccg ctggcctcaa ggagaggcaa gatgactacg tcgactgctg gaagggcctg
     2221 cgcaagcact tcgacccgaa acgccagcgg ccgtgagccg cgcgccgcca cccctagtca
     2281 cccgcgaatg ctgctcgcag cctccctgca acaaggagcg cgtcagatgt catctcgaac
     2341 ggcgctactg accgcgatcc tcgcgctcag cgcggtgatc gtggtcgaaa acgcctccgc
     2401 acagaactat ccagcccgac cgatccattt aatcgtccca tatcccgcgg gcggcgggac
     2461 tgatttcttc gcgcggctcg tcggacagaa gatgtccgaa ctcgtcggcc agccgatcgt
     2521 ggtcgagaac aagccgggcg cggcgaccaa tctcggcgcc gatttcgtcg ccaaggcgcc
     2581 gcccgacggc tataccgtgc tgctcggcga tgtcgcgacg tatgcggcca atcccagcct
     2641 ctacaagaag cttcctttcg acccggccaa ggattttgcg ccggtgacgc tcaccgcccg
     2701 cttcctgacc gtgctggtca ccaatccggc aaagctcaaa gcgaactccg tggccgagct
     2761 gatcgagcag gccaagagcc aacccgggaa aatcgacatc gcccacgccg gcgtgggtaa
     2821 tccgtttcat ctcgctgccg tgctgttcca gcaggcggcc ggcatcaagc tcaacgaggt
     2881 gccataccgc ggcgcgggcc ctgcggttca gggcctgctc ggcggcgacg tgcacatgat
     2941 gttcgtcgac tacgcgaccg cgcgctcgca tatcgcggcc ggcagcctga aagcgcttgg
     3001 ggttgccgcg ctcaccccgc ggcc
//
LOCUS       DATCWM010000371         2024 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_364468, whole genome shotgun sequence.
ACCESSION   DATCWM010000371 DATCWM010000000
VERSION     DATCWM010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2024
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_364468"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(48..1943)
                     /locus_tag="VIQ50_07125"
     CDS             complement(48..1943)
                     /locus_tag="VIQ50_07125"
                     /inference="COORDINATES: protein motif:HMM:NF017081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MASE1 domain-containing protein"
                     /protein_id="HEY9360187.1"
                     /translation="MSSLWLAVVVGCVYALSAKMSLALLTPEGVAEFWPAAGVAAGTL
                     IALGPNARWGVTAGTMVATIVANLMGDRNLLSSVVFAVCNAGEALLAAGLIERYFGRP
                     FSLDRLRHVLALLGAAIVATAVSGIGGTLGFILFHDSAAPFLVTWQNWFASDALGIVT
                     VAPLVIGLTSVAREPPARGETIEGFLGLALLIVMSIIVIKLPQQPWTTIVPIALLFPI
                     LLWIAARCQPVFAAAAAFIVTLAIVIATTIGIGHFGDPGLPVAERVLAARAGILAVAL
                     CAYVLAALFAERRQHEAALADSDARVQEALTAGAITTFAWDVLTGSSQRSANAAQILG
                     FDPVETFSAHNFLSRVHPEDRERFKASVRSVKPEHPAYTVTFRFKHPDGRELWLEETA
                     KGELDSAGRLVRVKGFTLDVTARKQSEDQQSVQNLLARVTVVAKDMCRGNGLPDADIQ
                     ALDGRIQSMADAYTLIGRSRWKGVDLAELVRRQLAPSASDVNATIWGPAVTLTAPATQ
                     ALAMVLHELVTNAAKYGALSTAHGRVEVNWHRGPHNDAANLSIAWREIGGPTVAASPD
                     CRYGVGIIRELIPHEFGGSVDLAFASDGVCCKIDIPIESIPSQAVSRPDGEIATMLLA
                     RADEVIE"
BASE COUNT          397 a          637 c          632 g          358 t
ORIGIN      
        1 ccacgccgcc gccgccccgc cgaggagcgt gatgaactcg cggcgtttca ctcgatcacc
       61 tcatcggcgc gcgcgagcag cattgtggcg atttctccgt caggccgcga gaccgcctgg
      121 ctcgggatgc tttcgattgg aatgtcaatt ttgcagcaaa ctccgtcgga tgcgaatgcg
      181 agatccaccg aaccaccaaa ctcgtgcggg atgagttcgc gaatgatgcc aacgccgtac
      241 ctgcagtcgg gtgaagccgc cacggtgggg ccaccgattt cccgccatgc gatcgacagg
      301 ttcgccgcat cattgtgagg tccgcggtgc cagttcacct ccactcgacc gtgcgcggtc
      361 gagagcgcgc cgtattttgc agcgttcgtc actaactcgt gcagcaccat tgccagcgcc
      421 tgggtcgccg gggccgtgag ggtgacggcc gggccccaaa ttgtcgcatt tacgtctgat
      481 gcgctgggcg cgagctgacg gcggacgagt tcggctaggt cgacgccctt ccaacggctc
      541 cggccgatta gagtgtaggc gtcggccata gattggatgc gcccatcgag tgcttgaatg
      601 tctgcgtcgg gcaaaccgtt ccctcggcac atatccttgg cgacaacggt cacgcgcgcc
      661 agcagattct ggacactctg ctgatcctcg gactgcttgc gcgcggtgac gtcaagagtg
      721 aagcctttga cgcgtactag gcgccccgcg gaatcaagtt cgccctttgc cgtttcctcg
      781 agccagagtt cccggccgtc ggggtgcttg aagcggaagg tgacggtata tgcagggtgt
      841 tcgggcttga cgctgcgcac ggaggccttg aaccgctctc gatcctcagg atgcactcgc
      901 gagagaaagt tgtgcgcgct aaaggtttcg accgggtcga aacccaaaat ctgcgccgcg
      961 ttggcgctgc gctgcgacga acccgtgagg acgtcccatg cgaacgttgt gatcgctccc
     1021 gccgtgagcg cctcctgcac tcgggcgtcg ctgtccgcaa gcgcggcttc gtgttgccgc
     1081 ctctccgcga aaagtgctgc gagaacatat gcgcagagcg caacagctag gatgccggcg
     1141 cgagcggcaa gcacgcgctc agccactgga agaccgggat cgccaaagtg gccgattcca
     1201 atcgttgttg cgatgacgat tgcgagcgtt acgatgaagg ccgcggccgc agcgaaaacg
     1261 ggctggcagc gtgccgcaat ccataacagg atcggaaaca gcagagcgat cggcacgatc
     1321 gtcgtccaag gctgctgtgg cagtttaatg acgatgatgc tcatgacgat gagcaatgcc
     1381 aacccgagaa aaccttcgat ggtttcgccg cgcgctggcg gctcgcgtgc gaccgaagtg
     1441 agcccgatga ctagcggcgc gaccgttacg atgcccagcg cgtcggatgc gaaccagttc
     1501 tgccaggtga cgagaaacgg tgccgccgaa tcgtggaata ggataaatcc aagggtaccg
     1561 ccgatcccgg agacggcagt tgcgacgatc gctgccccta gcaaggcgag cacgtggcgc
     1621 agccgatcga gactgaaggg ccgaccgaaa tagcgctcga tcaggccggc cgccagcagg
     1681 gcttctccgg cattgcagac cgcgaaaacc acagagctca aaaggtttcg atcgcccatc
     1741 agattggcca cgatggtcgc gaccatagtc ccagccgtca ccccccaacg tgcattcggt
     1801 cctagagcga tcaacgtgcc cgccgcaacc cccgcggccg gccagaactc cgccacgccc
     1861 tcgggagtga gcagggccag gctcatcttt gccgacaggg catagacgca cccgaccaca
     1921 acggcgagcc agagcgagct catccaacgc ggcgccggct gagcgtcagc ttgcagattc
     1981 tgcagcagtc tcgtacgcat ttctcgtact agctcacggc ttgt
//
LOCUS       DATCWM010000372         2730 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_521123, whole genome shotgun sequence.
ACCESSION   DATCWM010000372 DATCWM010000000
VERSION     DATCWM010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2730
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_521123"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..359)
                     /locus_tag="VIQ50_07130"
     CDS             complement(<1..359)
                     /locus_tag="VIQ50_07130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEY9360188.1"
                     /translation="MATASHEETSIDDAPVLTERRAGYRVITLNRPRYLNAFNEAMHQ
                     ALRRALAEAEEDSDCRALLLTGAGAAFCAGQDLRERVTADGKTAVLGNALETYYNPLV
                     RKLRALPIPVVAAVNGVA"
     gene            547..1794
                     /locus_tag="VIQ50_07135"
     CDS             547..1794
                     /locus_tag="VIQ50_07135"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9360189.1"
                     /translation="MIPITTNSAGLTRRGFAAGAGAAGLLAVTGTPFNSVRAQGGPLK
                     VGVLLPRSGAQAGIGQDCQRGVELAPAILRELSLPELAIMNADTETNVEVARARAEKL
                     INEGAQLLVGAFDSGQSTAIAQVAEQKGIPFVINIAAAPQITEQGYKFVFRNFPTAGM
                     ILSDAFANQKELFEATGVAPKSVVFMHVNDTFGTSMQQGINAVMPRFNMPYQIVEQIA
                     YDPTARDLSVEVAKAKATGAQALLMVSRLNDAILITRELVKQRWSPMAVLSMGPGWYE
                     DQYLKTLGKLSDGPISFVPWYDPHKRLSKQLDAALAKAYPGINMNTNHVFTFEALLVA
                     ADAYNRARSADPKALADAIRTTNITDNVSIGPGIQFNDKGQNDKLKNAAIQNRGGKLL
                     TIAPKEASNAKPELPMAAYDRRG"
     gene            1880..>2730
                     /locus_tag="VIQ50_07140"
     CDS             1880..>2730
                     /locus_tag="VIQ50_07140"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9360190.1"
                     /translation="MAAEIYLNVAVSGVLTGLVYGLMAVGLSVIFGVVRVVNFAHGEM
                     MTIAMYLAIVLFNGFGLDPLAMVVPLAAVLFALGYAMQAGIINPFITRPEHSQFILLV
                     AIALVIVNVLLIVFGPDAHNVQTAYSFDSFLVGPLIIDATKAYVGAATVAITAALFGF
                     FRLAPLGKAIRACADNYTGALVVGLNVKRLYALTFGLGAACVGAAGSMLVLLVDVTPA
                     LGPALTLLAFIIVITGGLGSMPGAVLGGVLIGVTEAMAGLFFTPSAKSMFSFALLVLV
                     LLFRPQG"
BASE COUNT          485 a          882 c          858 g          505 t
ORIGIN      
        1 gcgacaccgt tgaccgcggc aacgaccgga atcggcaacg cgcgcaactt gcgcaccagc
       61 ggattgtaat aggtctcgag cgcgttgccc agcacggccg tcttgccgtc agcggtgaca
      121 cgctcccgca agtcctgccc cgcgcagaag gcagcgccgg cgcccgtgag caacagcgca
      181 cggcagtcgc tatcctcctc ggcctcggcc agcgcgcgcc tgagcgcttg atgcatcgcc
      241 tcgttgaacg cgttcaggta ccgcggccgg ttgagcgtaa tgacacgata gccggcccgc
      301 cgctcggtga ggacaggtgc gtcgtctatg gaagtctcct cgtgcgatgc ggtggccatg
      361 ctagcgcgcc tcgatgggca aatcgcgccc ggccgacgca actcctgcca actcgcacgc
      421 accgaatgcg caactgcgtt cgccgctgcg cactccccga gcgcgctgtc atggcccatt
      481 gcgtccggaa gggaactata agagaaaacc gggcacgcca gcgttgagcc gccttgggag
      541 gagagaatga tccctataac aacgaattct gccggcctca cccgccgcgg gtttgccgca
      601 ggcgccgggg ctgccgggtt gctcgccgtt actggcacgc cgtttaactc tgtgcgtgca
      661 cagggtgggc cgctcaaggt cggcgttctg ctgccgcgct cgggggccca ggcggggatc
      721 gggcaggatt gtcagcgcgg ggtcgagttg gccccggcga tcctcaggga gctcagcctt
      781 cccgagctcg cgatcatgaa cgccgacacc gaaaccaacg tggaggtggc gcgggcgcga
      841 gccgaaaaac tgatcaacga gggtgcgcag cttttggtcg gcgctttcga ctcgggccag
      901 agcaccgcga tcgcgcaggt cgccgagcag aagggcattc ctttcgtcat caatatcgca
      961 gcggcgccgc agatcaccga gcaaggctac aagttcgttt tccgaaattt cccgaccgcg
     1021 gggatgatct tgagcgacgc cttcgccaat cagaaggagc tcttcgaggc gacgggcgtg
     1081 gcgccgaaat cggtcgtgtt catgcacgtg aacgacacct tcggtacctc gatgcagcag
     1141 gggatcaacg ccgtgatgcc ccgcttcaac atgccctacc agatcgtcga gcagatcgcc
     1201 tacgatccga cggcgcgcga tctctccgtc gaagtagcca aggcgaaagc aacgggggcg
     1261 caagcactgc tcatggtcag ccgcctcaat gacgcgatcc tgatcacgcg cgaactagtg
     1321 aagcagcgct ggtcgccgat ggccgtgctg agcatgggac cgggctggta cgaggaccag
     1381 tacctcaaga ccttgggcaa gctgtcggac ggcccgataa gcttcgtgcc ctggtacgac
     1441 ccgcacaagc gattgagcaa gcagctcgac gccgctctcg ccaaggccta tccgggcatc
     1501 aatatgaaca ccaaccatgt cttcacgttc gaggcgctgc tggttgctgc cgacgcctac
     1561 aaccgggcgc gctcggccga cccgaaggcg ctcgccgatg ccatccgcac gaccaatatc
     1621 accgataacg tcagcatcgg gcccggcatc cagttcaacg acaagggcca gaacgacaag
     1681 ctcaagaacg ccgcgatcca gaatcgcggg ggcaaacttc tcacgatcgc gccgaaagag
     1741 gcgtcgaacg ccaagcccga attaccgatg gccgcctatg accggcgcgg ctgagatggg
     1801 cacggcctga tctcgttcgg accggctgat ggcacaacca catggacggg catagaagcc
     1861 cttggggcag gaccgatcgg tggccgcaga gatctatttg aacgtcgcgg tcagcggtgt
     1921 tttgaccggc cttgtctacg gactgatggc ggtcgggctc tcggtcatct tcggagtcgt
     1981 gcgcgtcgtc aatttcgcgc atggcgagat gatgaccata gccatgtacc tcgccattgt
     2041 gctgttcaat ggcttcggcc tcgacccttt ggcgatggtg gtgccgctgg cggccgtgct
     2101 gtttgcgctc ggctatgcga tgcaggccgg catcatcaac ccgttcatca cccggcccga
     2161 gcacagccag tttatcttgc tggtggcgat tgcgctcgtc atcgtcaatg tgctgctgat
     2221 cgtcttcggt cccgatgcgc acaacgtgca gacggcgtac tccttcgaca gcttcctcgt
     2281 tgggccgctt atcatcgacg ccaccaaggc ctatgtcggc gcggcaaccg tcgcgatcac
     2341 cgcggcactg ttcggcttct ttcgcttggc tccattgggc aaggcgatcc gtgcttgcgc
     2401 tgacaactat accggcgcgc tggtggtagg gctcaacgtc aagcgcctct acgcactcac
     2461 gttcggcctc ggcgccgcct gcgtgggagc ggccggttcc atgctcgtgc tgctggtcga
     2521 cgtgacgccg gcgctgggac ctgccttgac gctactcgcc ttcattatcg tcatcaccgg
     2581 cggcctcggc tccatgcccg gtgcagtgct cggcggggtt ttgatcgggg tcaccgaggc
     2641 aatggccggc ctgttcttca caccgtcggc caagagtatg ttctcgtttg cgctgctggt
     2701 gctggtgctg ctgttccggc cgcagggcat
//
LOCUS       DATCWM010000373         3233 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_56696, whole genome shotgun sequence.
ACCESSION   DATCWM010000373 DATCWM010000000
VERSION     DATCWM010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3233
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56696"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..258)
                     /locus_tag="VIQ50_07145"
     CDS             complement(<1..258)
                     /locus_tag="VIQ50_07145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018459813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HEY9360191.1"
                     /translation="MTAEEIVARLVYRDGLMLVIDKPAGLAVHKGPKGGESLEDYFDA
                     LRFGLPRPPALAHRLDRDTSGCLVLGRHRKALAALGRLFKSG"
     gene            323..1258
                     /gene="ftsY"
                     /locus_tag="VIQ50_07150"
     CDS             323..1258
                     /gene="ftsY"
                     /locus_tag="VIQ50_07150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HEY9360192.1"
                     /translation="MNDQPAEKQSWWQRLSGGLKRTSASIGGAVSDLVVKRKLDQAML
                     DDIEEVLIRADLGVDSAARIAAAVGEGRYDKSITVDEVKAVVAAEVEKVLAPVAKPLA
                     IREAKPFVALVVGVNGSGKTTTIGKLAAKLRAEGRSVMLAAGDTFRAAAIDQLNIWGG
                     RSGASVIARAPGADAAGVAFDALTEARGEEIEVLLVDTAGRLQNKAVLMDELQKIVRV
                     MKKIDPMAPHAVLLVLDATVGQNALSQVEVFRDIAGVSGLVMTKLDGTARGGILVAIA
                     AKFGLPVHFVGVGEGIDDLAPFSARDFARAIAGIE"
     gene            1326..1964
                     /locus_tag="VIQ50_07155"
     CDS             1326..1964
                     /locus_tag="VIQ50_07155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007872257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HEY9360193.1"
                     /translation="MKAKKPQLNPVLKLVLDLGPLLLFFLANSRPALFLPLVSPILPA
                     DIAPDERVGIFVATAVFMVSVVLALAVSYALTRHLPAMPLITAIIVLVFGSLTLLLHD
                     EHFIKLKPTIIYVLFGAVLLSGLALGKPLLGMVFDSVFQLTEEGWRKLTLRWALFFFA
                     LAVLNEIVWRSQSTDVWVSFKVFGVVPLTFVFAALQYPLLTKYAVPEKTEER"
     gene            complement(1965..2513)
                     /locus_tag="VIQ50_07160"
     CDS             complement(1965..2513)
                     /locus_tag="VIQ50_07160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009031947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbE family thiol:disulfide interchange protein"
                     /protein_id="HEY9360194.1"
                     /translation="MLVLIPLLAFLGLAALFVLRLGAGDPSRIPSALIGHPAPRTELP
                     PLPGLERDGKAVPGLDSGDFRGQVTVLNVWASWCVPCREEAALLITLATDSRLRVVGM
                     NYKDQPDNARRFLGRFGNPFAANGVDGNGRAAIEWGVYGVPETFVIDRDGRITYKLIG
                     PLTPDNLEAAVRPAIEKALASQ"
     gene            complement(2566..2745)
                     /gene="ccmD"
                     /locus_tag="VIQ50_07165"
     CDS             complement(2566..2745)
                     /gene="ccmD"
                     /locus_tag="VIQ50_07165"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmD"
                     /protein_id="HEY9360195.1"
                     /translation="MNFGPHAAFIITAYVAAIAVVAGLIAWIVFDRRQLSRILDDFEA
                     QGISRRSTRTDGDKW"
     gene            complement(2748..>3233)
                     /gene="ccmC"
                     /locus_tag="VIQ50_07170"
     CDS             complement(2748..>3233)
                     /gene="ccmC"
                     /locus_tag="VIQ50_07170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015232 - heme transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease CcmC"
                     /protein_id="HEY9360196.1"
                     /translation="PLADVAAKAAAPIGAAFTLMCLVTGSLWGRPMWGTYWVWDARLT
                     SVLVLFLMYLGVIALWRTIDDPAQAARTAAILTLVGAINIPIIKFSVDWWNTLHQPAS
                     VFRLGGSTIHPAILVPLIVMAVAFTLLFLTLHLAAMRNEIMRRRVRTLMMLQAGARMG
                     P"
BASE COUNT          594 a         1028 c         1035 g          576 t
ORIGIN      
        1 cccgctcttg aacaggcgac cgagcgccgc cagcgccttg cgatggcggc cgagcaccag
       61 gcagccggag gtatcgcggt cgaggcgatg ggcgagcgcg ggcgggcgcg gcagcccaaa
      121 gcgcagcgcg tcgaaataat cttcgagact ttcgccgccc ttgggcccct tgtggaccgc
      181 caatcccgcg ggcttgtcga tcaccagcat caggccgtcg cgatagacga gccgagccac
      241 tatctcttca gcggtcatgg tcacttacca agtttggatc aaaccgctat cacgatcgtg
      301 atctcgaacg aaccggaacg acatgaacga ccagccggca gaaaagcaaa gctggtggca
      361 gcggcttagc ggcggcctca agcgtacgtc ggcgtcgatc ggcggggccg tctccgatct
      421 cgtcgtcaag cgcaagctcg atcaggcgat gctcgacgac atcgaggagg tgctgattcg
      481 ggccgatctc ggcgttgata gcgcggcgag gatcgccgcc gcagtgggtg aaggacgcta
      541 cgacaagtcg atcaccgtcg atgaggtcaa agcggtggtc gccgccgagg tcgaaaaggt
      601 ccttgcgccg gtagccaagc cgcttgcgat ccgcgaagcg aagccgttcg tcgcgcttgt
      661 cgtgggcgtg aacggttcgg gcaagaccac aaccatcggt aagcttgctg ccaagctccg
      721 cgcggaaggt cgttcggtga tgctcgccgc cggcgacacg ttccgcgcag ccgccatcga
      781 ccagctcaac atttggggcg ggcgcagcgg cgcttcggtc atcgcgcggg caccaggcgc
      841 cgacgccgca ggggtcgctt tcgatgcgct caccgaggcg cgcggcgagg agatcgaggt
      901 gctgctcgtc gataccgccg ggcgcctgca gaacaaggcg gtgctaatgg acgagctgca
      961 gaagatcgtg cgcgtgatga agaagatcga cccgatggcc ccgcatgccg ttttgttggt
     1021 gctcgatgcg acagtcgggc agaacgcact ctctcaggtc gaggtttttc gcgacattgc
     1081 cggcgttagc ggacttgtca tgaccaagct cgacggcacg gcgcgcggcg gcatcttggt
     1141 cgccatcgcc gcgaaattcg gcctgccggt tcacttcgtc ggcgtcgggg agggtatcga
     1201 cgatctcgcg ccattctcgg cccgggactt cgcccgggcg atcgccggaa tcgaatgaaa
     1261 acatctctcc cgccagacgc gaagcccgat ggcaattgcg ccgcggccgc gctagatgag
     1321 cggcgatgaa agcaaagaag ccgcagctca atcctgtgct caagctggtg ctcgatctcg
     1381 ggccgttgct gctgttcttt ctcgccaact cgcggccggc gctgttcctg ccgctggtct
     1441 cgccgatcct gcctgcggac atcgcgcccg acgagcgcgt cggcatcttc gtcgccaccg
     1501 ccgtgttcat ggtttccgtg gtgctcgcgc tcgccgtgtc gtacgcgctg acgcggcact
     1561 tgcccgcgat gccgctcatc actgcgatca tcgtgttggt gttcggctcg ctgacgctcc
     1621 tcctgcacga cgagcacttc atcaaactca agcccaccat catctatgtg ttgttcggcg
     1681 cagtgctgct cagcgggctc gctctcggca agccgctact cggcatggtg ttcgattccg
     1741 tgttccagct caccgaagag ggatggcgca agctgaccct gcgctgggcg ctgttcttct
     1801 tcgcgctcgc ggttctcaac gaaatcgtct ggcgctcgca atcgaccgat gtgtgggtga
     1861 gcttcaaagt gttcggcgta gttccgctca cgttcgtatt cgccgccttg caatatccgc
     1921 tgttgacgaa atacgcggtg ccggaaaaga cggaggagcg ataatcactg actggcaagc
     1981 gccttctcga tcgcaggcct taccgccgct tcgagattgt caggcgtgag cggcccgatc
     2041 agtttgtagg tgatgcggcc gtcgcgatcg atgacgaagg tctcgggcac cccatatact
     2101 ccccattcga ttgccgcgcg gccgttgccg tcgacgccgt tggccgcaaa tggatttcca
     2161 aagcggccga ggaaccgccg cgcgttatcg ggctggtcct tgtagttcat tccaacgacg
     2221 cgcaggcgag agtccgtcgc gagcgtgatg agcaacgccg cttcctcgcg acagggcacg
     2281 caccatgacg cccacacatt gagcaccgtc acttggcccc ggaaatcccc gctgtcgagg
     2341 ccgggcaccg ccttgccgtc gcgctccagg ccggggagcg gtggcagctc ggtccgcggg
     2401 gcaggatgtc cgatcaaggc cgatgggatg cgggaaggat cacccgcacc gagtcgcagc
     2461 acgaacagcg cggcgagccc aaggaaggcg aggagcggga tgagcaccag catccggcct
     2521 tgccacccgc gcgcattcgc gacggccacg cttttgtcca tcaaatcacc acttgtcccc
     2581 gtcggtgcgt gtggagcgtc ggctgattcc ctgcgcttcg aagtcgtcga ggatgcggct
     2641 caactgccgg cgatcgaaca cgatccatgc gatcaatcca gccacgaccg cgatcgcggc
     2701 gacataggca gtgataatga acgcagcatg cggaccgaag ttcattatca cggtcccatc
     2761 cgggcgcccg cctgcagcat catcagggta cgcacgcgcc gccgcatgat ctcattgcgc
     2821 atcgcggcca gatgcagcgt caggaacaac agcgtgaatg caacggccat gacgatgagt
     2881 ggcacgagaa tcgcgggatg aatcgtcgat ccgccgaggc ggaacacgga cgccggctgg
     2941 tgcagcgtgt tccaccaatc caccgagaat ttgatgatcg ggatatttat ggcgccgaca
     3001 agcgtcagga tcgcggccgt tcgtgccgcc tgtgccgggt catcgatggt gcgccacaac
     3061 gcgatcacgc cgaggtacat caggaatagc accagcacgg aggtcaaacg ggcatcccag
     3121 acccagtagg ttccccacat tggtcggccc cacagcgagc cagtgacgag acacatcagc
     3181 gtgaaggctg ctccgatcgg cgctgcggcc ttggcagcga catcggcgag cgg
//
LOCUS       DATCWM010000374         2663 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_207984, whole genome shotgun sequence.
ACCESSION   DATCWM010000374 DATCWM010000000
VERSION     DATCWM010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2663
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_207984"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(176..1081)
                     /locus_tag="VIQ50_07175"
     CDS             complement(176..1081)
                     /locus_tag="VIQ50_07175"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9360197.1"
                     /translation="MRRIGVLMNLASDDAEGQARLAAFHQGLQQLGWTVGRNVQIDYR
                     WGAGDAERYRKFAAELVALAPDVILAIGAITVGPLQQASRSVPIVFTDVTDPIGAGFV
                     ASMARPGGNATGFILFEYGISGKWLELLKQIDPGIKRAAILRDPTLIASTSQFAAIQS
                     IAPSLGVELSPIGTRNADDIEEEVTQFARGSNGGMIVVTGTSAIMHRKLIISLAARHR
                     LPAVYPFRYYVADGGLISYGPDNIVSYRRAAGYVDRILKGEKPSDLPVQAPTKYELVI
                     NLKTAKALGLEMPATVLARADEVIE"
     gene            complement(1214..>2663)
                     /locus_tag="VIQ50_07180"
     CDS             complement(1214..>2663)
                     /locus_tag="VIQ50_07180"
                     /EC_number="1.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
                     /protein_id="HEY9360198.1"
                     /translation="VNNGVMFVATPGNQMLAIEAKTGNILWRYKRTLPEDVVHLHPTN
                     RGVALYGDKVYFASADCVLIALDVKTGKEVWTAKVDDYKKAYYMSLAPLVVDGKVILG
                     ASGGELGVRGFVAAMDAETGKELWKTYTVPAPGEPGSETWPAGGDHYKRGGGAIWMTG
                     TYDPETNLTFWGTGNAAPWFGDQRPGDNLYTSSVVALDVNSGQIKGHFQYHPNDSWDW
                     DEVSPPIVVDYQRDSRPVKGLINVSRSGYIWHLERTAGKINFVTGQPYVRQNVFKSLD
                     PNTGRPDIDETRKPGTGKTADFCPSLWGGKDWPPVAFSPQTRLLYIPANENLCHELTG
                     EVPKYVVGERYMGVAKNVMKMVAGADHIGELQAWNVDTGKKVWTTNLPSFNWGPVLAT
                     GGDVLFAGGTNDRMFRAFDAKTGKILWEFPTISGVAAVPVSFQVEGKQYIAVQSGWGV
                     DPAKMQARMNLLFPGKYPEVPQGGAVYVFAVK"
BASE COUNT          488 a          835 c          807 g          533 t
ORIGIN      
        1 gtgagcgtca ggtcacctga agtcgcgttg acggtcgtca gcgtagtcct ctcaaagcca
       61 ccgctctaac agagtgagtg gcagtcggcg ctaaggcgca acgagctctc tcttcgccga
      121 cttctgcaac aaaatctgcc aggaagcgac atatgcactg cagcaaagtc tatgtttact
      181 cgatcacctc gtcggcgcgg gcgagcacgg tagctggcat ttcgaggccg agcgccttag
      241 cggtctttag gttgatcacc agctcgtact tggtcggcgc ctgcaccggt aggtccgatg
      301 gtttttcgcc cttgaggatg cggtcgacat agcccgccgc gcgacgatag gagacaatgt
      361 tatcagggcc gtaagagatc aggccgccgt cggcgacata gtagcggaat gggtagaccg
      421 cgggcagtcg atgcctcgcc gccagtgaaa tgattagctt ccgatgcatg atcgccgatg
      481 tgcccgtcac tacgatcatg ccgccattcg atccgcgcgc gaattgtgtc acttcttctt
      541 cgatgtcgtc ggcgttgcgg gtgccgatcg ggctcagctc aacaccgagc gacggcgcga
      601 tggactgaat ggccgcgaac tggctcgtcg aggcgatcag tgtggggtcc cgcaggattg
      661 ctgctcgctt gatgcccgga tcaatctgct tgagtaactc cagccatttc ccgcttattc
      721 cgtattcgaa caagataaag ccggtggcgt taccgcccgg ccgtgccata ctcgccacga
      781 acccggcgcc gatcggatca gtgacatcag tgaacacgat tggcacggag cggcttgcct
      841 gttgcaacgg tccaacggtg attgcgccaa tcgccaggat gacatcgggc gccagcgcca
      901 ccaattccgc ggcaaatttg cgatagcgct cggcatcacc cgcgccccac cgatagtcga
      961 tctgcacatt cctgccgacg gtccagccca attgctgcag cccctgatgg aaagccgcga
     1021 ggcgcgcctg tccttccgca tcatcggacg ccagattcat gagcacgccg atgcgccgca
     1081 tgcgattgtc ctgcgcccag gtcgcgagcg gccacgccgc cgccggagcg ctgccaagca
     1141 gagtgatgaa atcgcgccgt ttcattgacg ggaacgctct gcaacggcct ccgcgatcaa
     1201 cgcaactgcg ccgtcacttc accgcaaaga catagaccgc gccgccctgc ggcacctcgg
     1261 gatatttgcc ggggaacagc aaattcatgc gcgcctgcat cttggccggg tcgacgcccc
     1321 aaccggattg caccgcgatg tactgcttgc cctctacctg gaacgacacc ggcaccgccg
     1381 cgacccccga gatggtcggg aactcccaga ggatttttcc agtcttagca tcgaaggcgc
     1441 ggaacatgcg atcgttggtt ccgccagcga acagcacgtc gccgccggtg gccagcaccg
     1501 gcccccagtt gaacgacggc aggttagtgg tccacacctt cttgccggtg tcgacgttcc
     1561 aggcctgcag ctcgccgatg tgatcggcgc cggcaaccat cttcatcacg tttttcgcca
     1621 cacccatgta gcgttcgccc acgacatatt tgggaacctc tccggtgagc tcgtggcaca
     1681 ggttttcatt ggcggggatg tacaagagcc gcgtctgcgg actaaaggca accggcggcc
     1741 agtccttccc gccccatagg ctcggacaga aatcggcggt cttgccagtg ccgggcttgc
     1801 gcgtctcgtc gatgtcgggc cggccagtgt tggggtcgag gctcttgaac acgttctggc
     1861 gcacataggg ctggccggtg acgaagttga tctttccggc ggtacgctca aggtgccaga
     1921 tgtagccgct gcgcgagacg ttgatgagac ctttcacggg tctgctgtcg cgttgataat
     1981 cgacgacgat tggcggcgat acttcgtccc agtcccacga gtcgttgggg tgatattgga
     2041 agtggccctt tatctggccg ctgttgacat cgagtgcgac gaccgagctc gtgtagagat
     2101 tgtcgcccgg ccgctgatcg ccgaaccacg gggcggcgtt gccggtgccc cagaaagtga
     2161 gattggtctc cgggtcatag gttccggtca tccagatcgc gccgccgccg cgcttgtagt
     2221 gatcgccgcc tgccggccag gtctcgctgc cgggctcgcc cggcgccggc accgtgtagg
     2281 tcttccatag ctccttgccg gtctcggcat ccatcgcggc gacaaagccg cgcacgccca
     2341 attcaccgcc agacgccccg aggatcacct tgccgtcgac gacgagcggc gcgagcgaca
     2401 tgtagtaggc tttcttgtag tcatcgacct tggcggtcca gacttccttg ccggtcttga
     2461 cgtcgagcgc gatcaacacg caatcggcgg acgcaaagta gaccttgtcg ccatagagcg
     2521 cgacgccgcg gttggtcgga tgcagatgga ctacatcttc ggggagtgtg cgcttataac
     2581 gccaaaggat attgcccgtt ttggcctcaa tggcgagcat ctggttgccg ggggtggcga
     2641 cgaacatcac gccgttgttc acg
//
LOCUS       DATCWM010000375         4588 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_521134, whole genome shotgun sequence.
ACCESSION   DATCWM010000375 DATCWM010000000
VERSION     DATCWM010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4588
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_521134"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1193
                     /locus_tag="VIQ50_07185"
     CDS             <1..1193
                     /locus_tag="VIQ50_07185"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HEY9360199.1"
                     /translation="GAGAVDAFAGEGFMPGTKLPDPLMWAPMRADELIKSPKEAINVF
                     DFEPVCRQNVPPAHFGYMASGIDDEVTLRANREGFLKFQLRPRRLVDVSKVDMSTDIL
                     GVKYASPIVLAPIGGQRSFHDEGEVASARAAKAGDHLQILSTATSLGVEDVTGARGQP
                     IWYQLYATNKWEVAEAMVKRAEKAGCLAVAVTVDRSGGRNQETLFRLRPTDTRDCNAC
                     HDRSSLQASMRTRAMYQGLDLSGLTNTQSSAMTWDFLKRLRDTTKMKIVIKGILAWED
                     AVIAADNGIDAIIVSNHGARSEDSGRSTIDALPEIVEAVHGRIPIVVDSGFRRGSDIV
                     KALCIGANAVCIGRPCIWGLGAFGQSGVERVLELLRAETYAMMQQVGAPSIKDLVPAM
                     VRRA"
     gene            1285..2466
                     /locus_tag="VIQ50_07190"
     CDS             1285..2466
                     /locus_tag="VIQ50_07190"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEY9360200.1"
                     /translation="MLKTIAAFDRIGEENAFAVLARANALAAQGRDIINLGIGQPDFR
                     TPDFIVEAAIKALRDGHHGYTPAVGIPPLRKAVAADLEQRFKVSVSPDEVMILPGGKP
                     TMFMSILMFGEAGADILYPDPGFPIYRSMIEYTGARPIPVPIREENNFAFSAEETLKL
                     ITPQTRLLILNSPANPTGGVTGKREVDKLVAGLERFPDVAVMSDEIYDHMVYDGETHV
                     CLLSYPSIRDRLILLNGWSKTYAMTGWRMGYAIWPGKLYDYARKLAVNLHSCVNAATQ
                     YAGLAALKGPQDDVAKMVAEFDRRRKVVVEGLNRLPGVSCATPKGAFYAFPNIKHTGW
                     KAKALATALLEDAGVAIIGGPDFGVLGEGYVRLSYANSTENILRALGRMGEFLTSRKA
                     A"
     gene            2488..3732
                     /locus_tag="VIQ50_07195"
     CDS             2488..3732
                     /locus_tag="VIQ50_07195"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY9360201.1"
                     /translation="MLDITPSRGLSEEQRLMRQSCRDFVDEVITPFIRSNWQREWDMN
                     PQTRLPPEILERAEEIGIRTLGVPEEFGGIELDPKSEVRTFALISEEIARGDSGLADK
                     LVQNWKVSVLLRNLAPRHLQEKWFARLVGEPQFLLAHCLTEPRGASDRWLPYNVPEAA
                     MQTRAVKKNGEWVINGRKQFISNGYDASLYVVYANTNPKVGMLQGTSSFLVPRDTPGL
                     TVARCNETMGCRFMNNGELVFEDMRVPEDHLLTENDALGKAGVYFRPGKIIQAAKNLG
                     VGVHAFEAAAEYVQNYVQGGRTLIKHQAVALRLAEMATRIEAVRALLERAAQAVDDNA
                     PDAETLCNMVKLFASEEILKVAQHCLELHGGNGVMLDFGVEKIFRDAAIFLHMDATVD
                     ISKLKIVKSMFPATAGTYAGPE"
     gene            complement(3806..4369)
                     /locus_tag="VIQ50_07200"
     CDS             complement(3806..4369)
                     /locus_tag="VIQ50_07200"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006725 - cellular aromatic compound
                     metabolic process [Evidence IEA];
                     GO_process: GO:0019439 - aromatic compound catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic-ring-hydroxylating dioxygenase subunit
                     beta"
                     /protein_id="HEY9360202.1"
                     /translation="MAKRRRPKPKPPPSRRPVLVARHRAALRASETLDLNRCERFLQH
                     EARLLDEGKFDDWLALFTPDGCYWVPSEPDQENPHDVVSLIYDDRRLLETRVRRLASP
                     RIYSQEPRSRTSRIVSNVSIEDGDNNACTVRSKLLMVEYRRGAQRLFAGTAFHRLVQA
                     DGLILIASKRVDLLNCDAPLDGIVVPF"
     gene            complement(4385..>4588)
                     /locus_tag="VIQ50_07205"
     CDS             complement(4385..>4588)
                     /locus_tag="VIQ50_07205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360203.1"
                     /translation="YNRLEMGMSSEGAEWLQIGRGYQSDVPDTHGGRRGKNSTSEVYI
                     RNMLDAWLGLMTKGHAAPARAAS"
BASE COUNT          841 a         1476 c         1481 g          790 t
ORIGIN      
        1 ggggcgcggg cgcagtggat gcttttgccg gcgaaggatt catgcccggc accaagcttc
       61 ccgatccgct gatgtgggcg cccatgcgcg cggacgagct catcaagtcg cccaaggagg
      121 cgatcaacgt cttcgacttc gagccggtgt gccggcagaa cgttccgccc gcgcatttcg
      181 gctacatggc ctccggcatc gacgacgagg tcacgctgcg cgccaatcgc gagggcttcc
      241 tgaaattcca gctccgtcca cgccggctgg tcgacgtcag caaggtcgac atgtcgaccg
      301 acatcctcgg cgtgaaatat gcgagcccga tcgtgctcgc gccgatcggc ggccaaagat
      361 cctttcacga cgaaggcgag gtcgcttccg cgcgtgccgc caaggccggc gaccatctgc
      421 aaattttgtc gaccgccacc agcctcgggg tcgaggacgt gaccggcgcg cgcggccaac
      481 cgatctggta ccagctttac gccaccaaca aatgggaggt ggcggaggcc atggtgaagc
      541 gtgcggagaa ggcgggctgc cttgcggtgg cggtcacggt cgaccgctcc ggcggccgca
      601 accaggagac tctgttccgc ctgcgcccca ccgacacgcg cgactgcaac gcctgccacg
      661 atcgctccag tctccaggcg agcatgcgaa cccgcgcgat gtatcaagga ctcgatcttt
      721 ccgggctcac caatacgcaa tcatccgcga tgacctggga tttcctcaag cggctgcgcg
      781 ataccaccaa gatgaagatc gtgatcaagg gcattctcgc ctgggaggac gcggtgatcg
      841 ccgccgacaa cggcatcgat gccatcatcg tgtccaatca cggcgcccgc agcgaggatt
      901 ccggccgctc gaccatcgat gcgctgccgg aaatcgtcga ggcggtgcac ggccgcatcc
      961 caatcgtcgt cgacagcggc ttccgccgcg gctccgatat cgtcaaggcg ctgtgcatcg
     1021 gcgccaatgc ggtgtgcatc ggccggcctt gcatctgggg cctgggcgcc ttcggccaaa
     1081 gcggtgtcga gcgcgtactc gagcttttac gcgcggaaac ctacgccatg atgcagcagg
     1141 tcggcgcgcc atcgatcaag gacctagtgc cggcaatggt gcgccgcgcg tgatgagacg
     1201 aattgtgcgt agcgcgcgga tcaagcagaa actcaaaatg gcctagcgcc attctcacgc
     1261 cattcgcctc gggaacgtca tgccatgttg aaaaccattg ctgccttcga ccgcatcggg
     1321 gaggagaatg cgtttgcggt gctggcgcgc gccaatgcgc ttgccgcgca gggtcgcgac
     1381 atcatcaatc tcggcatcgg ccagcccgat ttccgcaccc cggatttcat cgtcgaggct
     1441 gcgatcaagg cgctgcgtga cggccaccat ggctatacgc cggcggtcgg catcccgccc
     1501 ctgcgcaagg cggtggcggc ggacctcgag cagcgcttca aggtgagcgt atcacccgac
     1561 gaggtgatga tcctgccggg cggcaagccg accatgttca tgtcgatcct gatgttcggc
     1621 gaagcaggcg ccgacatcct ctatcccgat cccggttttc cgatctaccg ctccatgatc
     1681 gaatataccg gcgcgcggcc catcccggtg ccgatccgcg aagagaataa cttcgccttc
     1741 tctgccgagg agacgctcaa gctgatcacg ccgcaaacgc ggctcttgat cctgaactcg
     1801 ccggccaacc cgaccggcgg cgtgacggga aagcgcgagg tcgacaagct ggtcgcgggc
     1861 ctcgagagat ttcccgacgt cgccgtcatg tcggacgaga tctacgacca catggtctac
     1921 gacggcgaga cgcacgtatg cctgctctcc tatccgtcga ttcgcgaccg gctgatccta
     1981 ctcaacggct ggtcgaagac ctacgccatg accggttggc ggatgggcta cgcgatctgg
     2041 ccaggcaagc tctacgatta tgcgcgcaaa ctcgcggtga acctgcactc ctgcgtgaac
     2101 gcggcgacgc aatacgcggg actggcggcg ctcaaagggc cgcaggacga cgtagcgaag
     2161 atggtggcgg agttcgaccg gcggcggaag gtcgtggtcg aaggattgaa ccgcctgccg
     2221 ggcgtctcct gcgccacgcc caagggcgcg ttctacgcct ttccaaatat caagcatacg
     2281 ggttggaagg cgaaagcgct cgccaccgcg ctgttggaag acgccggcgt cgccatcatc
     2341 ggcggccccg atttcggggt tctgggcgag ggctacgtgc ggctctccta cgccaactcg
     2401 acggagaaca tcctgcgcgc gctcgggcgc atgggtgaat tcttgaccag ccgcaaggcg
     2461 gcctaatcca cgatcggatc catcatcatg ctcgacatta ccccaagccg cggcctctcc
     2521 gaggaacagc gcctgatgcg gcagagctgc cgcgatttcg tcgatgaagt catcacgccc
     2581 ttcattcgct ccaactggca gcgggaatgg gacatgaatc cgcagacgcg cctgccgccg
     2641 gagatcctgg agcgcgccga ggagatcggc atccgcacgc tcggcgtgcc ggaggagttc
     2701 ggcggcattg agctcgaccc caaaagcgag gtgcgcacct tcgcgctgat ctccgaggag
     2761 atcgcacgcg gagactcggg acttgccgac aagctggtgc agaactggaa ggtctcggtg
     2821 ctgttgcgca acctcgcgcc gcgccacctg caggagaaat ggttcgcccg gctggtcggg
     2881 gagccccagt tcctgctggc gcattgcctg accgagccgc gcggcgcctc cgaccgctgg
     2941 ctgccttaca acgtgccgga ggcggcgatg cagacgcggg cggtgaagaa aaacggcgaa
     3001 tgggtcatta acggccgcaa gcagttcatc tccaacggct acgacgccag cctctacgtc
     3061 gtctacgcca ataccaatcc gaaggtcggc atgctgcagg gcacgtcctc gttcctggtg
     3121 ccgcgggaca caccgggcct cacggtggcg cgctgcaacg agaccatggg atgccggttc
     3181 atgaacaacg gcgaactggt gttcgaggac atgcgcgtgc cggaagatca tctgctgacc
     3241 gagaacgatg ccctgggcaa ggccggcgtc tatttccgtc cgggcaagat cattcaggcg
     3301 gcgaagaatc tcggcgtcgg cgtgcatgcc ttcgaggctg ccgccgaata cgtgcagaat
     3361 tacgtgcagg gcggacgcac tctcattaaa catcaggcgg tggcgctgcg ccttgccgag
     3421 atggcgacgc ggatcgaggc ggtgcgcgcg ctgctcgagc gcgctgcgca ggcggtcgac
     3481 gacaatgccc ccgacgcgga gacgctgtgc aacatggtca agttgttcgc ttccgaggag
     3541 atcttgaagg tcgcccagca ttgcctcgag ctgcacggcg gcaacggggt gatgctcgac
     3601 ttcggcgtgg agaagatctt ccgcgacgcc gccatcttcc tgcatatgga cgcgacggtc
     3661 gacatctcga agctcaagat cgtcaagtcg atgttcccgg cgacggcggg gacctacgcc
     3721 ggaccggagt gattctgttg gctcttgagc tattgacgac gtcgcgacaa acgtttctcg
     3781 acgcccagtc aatcagccgg acctatcaaa acggcacgac gatcccgtcg agcggcgcgt
     3841 cgcaattgag gaggtccacg cgcttggaag cgatcaggat aagcccatcg gcctgcacca
     3901 ggcgatggaa agcggtgccg gcgaacagcc gttgcgcgcc gcggcggtac tcgaccataa
     3961 gcagcttcga gcgcaccgtg caggcgttgt tgtcgccatc ctcgatcgac acgttgctga
     4021 cgatgcggct ggtgcgcgaa cgcggttcct gcgaatagat cctcgggctc gccaggcgcc
     4081 gcacgcgggt ctcgagcagc cgacggtcgt cgtagatcag cgagaccaca tcgtgcgggt
     4141 tctcctgatc cggctcgctc ggcacccagt agcagccgtc gggcgtgaac agcgccagcc
     4201 aatcgtcgaa cttgccctcg tcgagcagcc gcgcctcgtg ttgcaggaag cgctcgcagc
     4261 gattgaggtc gagtgtctcg ctggcgcgaa gggcggcgcg gtgacgcgcc accagcaccg
     4321 ggcgtcggct gggcggaggc ttgggcttcg gcctgcgtcg tttcgccatg ggtcggcttg
     4381 cgcgtcagga ggcggcgcgc gccggcgccg catggccttt ggtcatgagg ccgagccaag
     4441 catccagcat gttgcggata tagacctcgc tggtcgagtt cttgccgcgc cggccgccat
     4501 gcgtatcggg aacgtcgctc tgatagccgc ggccgatctg cagccattcg gcgccttcgc
     4561 tcgacattcc catctcgaga cgattgta
//
LOCUS       DATCWM010000376         2348 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_234893, whole genome shotgun sequence.
ACCESSION   DATCWM010000376 DATCWM010000000
VERSION     DATCWM010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2348)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2348)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2348
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234893"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1566
                     /locus_tag="VIQ50_07210"
     CDS             <1..1566
                     /locus_tag="VIQ50_07210"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEY9360204.1"
                     /translation="DALADPARRERTVVAVLLGYVALWTLYGAIAKASQDIHADMSEQ
                     FALGRELALGYPKHPPLAMLVVRAWFSVFPTADWAYYLLAMVNVALALWIAWRVSARF
                     LDGEKRAVGLALLTLVPFFNFHGLKFNVNTILLPLWAATTLWFLRSFETRRPFDAALA
                     GLFAAAAMYGKYWSIFLVLGLGVAALSDPRRAAYFRSSAPWVTIAVGALALAPHVAWL
                     IANDFAPFSYAMVLHGAGSLASTLGDSLGYLAGSAAYVAVPVLIVFATARPRRAAVKD
                     MAWPFSPPRRLAAAAFWAVLLAPALIAPLAGLRLVSLWSMSAFTLLPVMLLSSPRVAL
                     TRRDAAGVLTLALAFPLIMVAVAPAIALLIHRAGPEPASAHASVLAEPIERLWRETTD
                     RPLRIFSGFDAMTDGVTFYMRSHPLAVHVLDGIASPAMDERIDRDGIALLCPLPASSA
                     PGPDWCAKVALARARCSPPGKQMEIEVSRRYLGMDGEAARYLVIAIPPRGASAPPAEP
                     ATDCRARHLQAGG"
     gene            complement(1478..2275)
                     /locus_tag="VIQ50_07215"
     CDS             complement(1478..2275)
                     /locus_tag="VIQ50_07215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360205.1"
                     /translation="MRRRVVLAVVFLAAFILLFRLILLAGEFDTVITAARFAAARDDH
                     TTLRAFLYRMPKGGDLHTHLAGAVYAERFLAWAAQEDLCVDLQSVVLGKTQCERTGTL
                     PVADAMRDQKLYDRLVNALSMHDFLPSSAVPSGHDEFFATFDRFGAVSGSHLIDMTVD
                     QIKHYEAENVQYVEFMISAWCPGERARFAQAISEATEDAAKLAALQASGLADCVTTKR
                     NDLATAIGKNAVALIKAALTLPPGDDAPGNRLQVPPAARSHPAAGWQ"
BASE COUNT          315 a          797 c          788 g          448 t
ORIGIN      
        1 gatgcgctcg ccgaccccgc ccggcgcgag cgcaccgtgg tcgcggtcct cctcggttat
       61 gtggcgctct ggacgcttta cggcgccatc gccaaagcca gccaggatat ccacgccgat
      121 atgtccgagc agttcgcgct cgggcgggag ctcgcgctcg gctatcccaa gcatccgccg
      181 ctggcgatgc tcgtggtgcg cgcctggttc agcgtgttcc ccaccgccga ttgggcctac
      241 tacctgctgg ctatggttaa cgtcgccctt gcgctgtgga tcgcctggcg cgtgtcggcg
      301 cggtttctcg acggcgaaaa gcgcgccgtg gggctcgcgt tgctcacgct ggtgccgttc
      361 ttcaatttcc acggtctcaa gttcaacgtg aacacgatcc tgctgccgct gtgggcggcg
      421 accacgctgt ggtttctgcg ctcgttcgag acgcggcggc cgttcgacgc ggcgctcgcc
      481 gggcttttcg cggcggcggc gatgtacggc aagtactggt cgatctttct ggtgctcggg
      541 ctcggcgttg ccgcgctcag cgatcctcgc cgcgcggcgt atttccgctc gtcggcgccg
      601 tgggtgacca tcgcggtggg ggcgctcgcg ctcgcgccgc atgtcgcgtg gctgatcgcg
      661 aacgactttg cgcccttctc ctatgcgatg gttctgcacg gggctggttc gctcgcgtcc
      721 acgctcggcg attccctcgg ctatctggcg ggcagcgccg cctacgtcgc ggtgccagtg
      781 ttaatcgtat tcgccaccgc gcggccgcgc cgcgccgcgg tcaaagatat ggcgtggccg
      841 ttctcgccgc cgcgccgcct ggccgcggcc gcgttctggg cggtgctgct ggcgccggcc
      901 ttgatcgccc cactggccgg cctgcggctg gtgtcgctct ggtccatgtc ggctttcacg
      961 ctgttgcccg tcatgctgct gtcctcgccg cgcgttgcgc tcacgcgccg cgacgccgct
     1021 ggcgtgctca cgctcgcgct cgcctttccc ttgatcatgg tggcggtcgc gccggcaatc
     1081 gcgcttctga tccaccgcgc cggtccggag cccgcgtccg cccatgcctc ggtgttggca
     1141 gagccgatcg aacggctctg gcgcgagacc accgatcggc cgctgcgcat tttcagcggc
     1201 tttgacgcaa tgaccgacgg ggtcaccttc tacatgcgaa gtcatccgtt ggccgtgcac
     1261 gtgctcgacg gcatcgcctc gccggcaatg gatgagcgca tagaccgcga cggcatcgca
     1321 ttgctctgtc ccctcccggc gtcgtccgcg cccggcccgg attggtgcgc caaagttgcg
     1381 ctcgcgcggg cgcgatgttc gccgcccggc aagcagatgg agatcgaggt ctcgcgccgt
     1441 taccttggga tggacgggga agcagcgcgc tatctcgtca ttgccatccc gccgcggggt
     1501 gcgagcgcgc cgccggcgga acctgcaacc gattgccggg cgcgtcatct ccaggcggga
     1561 gggtgagcgc ggctttgatc agcgcgacgg cgttcttgcc gatcgcggtt gccaaatcgt
     1621 tgcgtttcgt cgtgacgcaa tcggcgagcc cgctcgcttg cagcgccgcg agcttggcgg
     1681 catcctccgt cgcttcgctg atcgcctgcg cgaacctcgc acgctcgcca gggcaccatg
     1741 cggagatcat gaactcgacg tattgcacgt tctcggcctc gtagtgcttg atctggtcga
     1801 cggtcatatc gatcaaatgc gagccggaca ccgcgccgaa tcgatcgaag gtggcgaaga
     1861 attcgtcatg tccgctcggc acggccgagc tgggcaggaa gtcgtgcatc gagagcgcat
     1921 tgacgagtcg gtcgtaaagc ttctgatcgc gcatggcgtc ggcgaccggc aacgttcccg
     1981 tgcgctcgca ctgcgtcttg cctagcacga cgctctgcag gtcgacgcaa aggtcctcct
     2041 gcgccgccca agcgaggaag cgctccgcgt aaaccgcgcc ggcgaggtgg gtgtggaggt
     2101 cgccaccctt cggcatgcga tagagaaacg cgcgcagcgt ggtgtgatca tcgcgcgccg
     2161 ccgcgaagcg ggccgcggtg atgaccgtgt cgaattcgcc ggcgagcagg atgaggcgga
     2221 acaagagaat gaaggccgcc aggaagacaa cggctaggac gacccggcgc cgcaaggctt
     2281 tgccccccgc tctcctcttt gccgcgccaa gctagcggtc gagcgtgccg aactcaatcg
     2341 caaggaag
//
LOCUS       DATCWM010000377         2806 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_445577, whole genome shotgun sequence.
ACCESSION   DATCWM010000377 DATCWM010000000
VERSION     DATCWM010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2806
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_445577"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..957
                     /locus_tag="VIQ50_07220"
     CDS             <1..957
                     /locus_tag="VIQ50_07220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY9360206.1"
                     /translation="AAERTRIAALLRTIAAEIPVLLVEHDIDRVFQIADHVTVMNEGK
                     VLVDGTVEDARSDAKVREVYIGSGVAVLAAKPRVSAAGTTPLLVVDKIDTFYGKSHIL
                     NAVSLDVREHEILALLGRNGAGKSTLLKTVIGIAPPAAGVIRLAGENTAGFASAEIAR
                     RGIGYVPQGRGLFAGMTVADNLTLGRLKRMTGSGIHWDDERIASYFPRLTDRWHSPAD
                     YLSGGEQQMLAVARALAGDVRVLLLDEPFEGLSPAVTEELFEAFDRLRYDVAIVIVDH
                     HLDLALALSDRTVVLERGAVTWTGPSHALRDDLALRRKMLWM"
     gene            948..1883
                     /locus_tag="VIQ50_07225"
     CDS             948..1883
                     /locus_tag="VIQ50_07225"
                     /EC_number="1.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase"
                     /protein_id="HEY9360207.1"
                     /translation="MDVNNRVAVVGAGLIGRSWAIVFAAGGFEVALHDISRDVVDAAR
                     VLIGQGLHDLAEHGLLDDPQAAAARVRAAADLADALAGAALVQENLPERVESKRAIFS
                     ELDRLAAPETILASSTSMIVASLFTENLKGRHRCLVAHPVNPPHLVPLVELVGAPWTA
                     PAIIDKAKAIYAAVGQAPIIVKREIEGFILNRLQAVLLSEAFRLVGDGYVTPQDLDKT
                     LKNGLGLRWSFMGPFETIELNAPAGIADYCGRYGASLSALSTADPAIYEGDNLARILS
                     QWEEALAADQVVARMRWRDRRLAALRAHQGSQPAD"
     gene            complement(1923..>2806)
                     /locus_tag="VIQ50_07230"
     CDS             complement(1923..>2806)
                     /locus_tag="VIQ50_07230"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9360208.1"
                     /translation="DLLRLSAAQRGAWDSAAPELGKSAGIFDKHEITLDLLYTRDGEV
                     ESSVASGNSDVGVGVSTIGVLRAYAKGAPLRVIGANTTGTANYWYVQATSVIKAIKDI
                     NGKTIAYWTSNAASRYDVFDLIKQYRLKARPIAIGGPTATFNQVMSGHVDVGWAEAPF
                     GVDAIEQGKIRVVARATDVSAIRRDTVRVLITNADALQKRKDVLARFMQAYRETIDWM
                     YSDPAALKRYAEFAGVSEGIAKRLRDEFYTKDMLAPDKVVGLDAIMKEAITSRYILTP
                     LSKAQIAELIQIPTPVR"
BASE COUNT          475 a          915 c          882 g          534 t
ORIGIN      
        1 gccgccgagc gcacgcgcat cgccgcgctg ctgaggacca tcgcggcgga gattcccgtg
       61 ctgctggtcg aacacgacat cgatcgcgtc ttccagatcg ccgaccatgt caccgtcatg
      121 aacgagggca aggtcttggt cgacggcacg gtcgaggacg cgcgcagcga cgccaaggtg
      181 cgcgaagtct atatcggctc cggcgtcgca gtgctcgccg ccaagccgcg ggtctcagcg
      241 gccggcacga cgccgctact cgtcgtcgac aagatcgaca ccttctacgg caagagccat
      301 atcctcaacg ccgtctcgct cgatgtgcgc gagcatgaaa tcctggcatt gctcggtcgc
      361 aacggcgccg gcaaatcgac actgttgaag acggtgatcg ggatcgcccc gcccgccgcc
      421 ggcgtcattc gcttggccgg cgagaatacg gcggggtttg cctcggccga gatcgcccgg
      481 cgcggcatcg ggtacgtccc ccagggtaga ggccttttcg ccggcatgac ggtggccgac
      541 aatctcacgc tcggccgcct caagcgcatg accggcagcg gcatccattg ggacgacgag
      601 cgcatcgcct cgtatttccc gcgcctgacc gatcgctggc attcgccggc ggactatctt
      661 tcgggcggag aacaacagat gttggcggtc gcgcgcgcgc ttgccggcga cgtgcgcgtg
      721 ctgctgctcg atgagccgtt cgaggggctc tctccggccg ttaccgagga actgttcgag
      781 gcgttcgacc ggctacgcta tgatgtcgca atcgtcatcg tcgaccatca tctcgatctc
      841 gcgctcgcgc tctcggaccg cacggtggtg ttggagcgcg gcgccgtcac ctggaccggt
      901 ccttcgcatg ccctgcgaga cgatctcgcg ctgaggagaa agatgctgtg gatgtgaaca
      961 atcgcgtcgc cgtggtcgga gccggtttga tcggtcgctc ttgggcgatc gtgtttgcgg
     1021 ccggcggctt cgaggtcgcg ctccacgata tcagccgcga tgtcgtcgat gccgcgcgcg
     1081 tgctcattgg gcaggggctg cacgatcttg ccgagcacgg cctcctcgac gatccgcaag
     1141 ccgcggccgc gcgcgtgcgc gccgccgccg acctcgccga tgctctcgct ggcgccgccc
     1201 tcgtccagga gaatctccca gagcgcgtcg agagcaagcg cgcgatcttt tccgagctcg
     1261 accgactcgc cgcacccgaa acgattctcg cctcgtccac ctcgatgatc gtggcgagcc
     1321 tgtttacgga aaatctgaaa ggacggcatc gctgcctcgt cgctcatccc gtcaacccgc
     1381 cgcatctcgt cccgctggtg gagctcgtgg gcgcaccctg gacggcgcct gcgatcatcg
     1441 acaaagccaa ggcaatctat gcggccgtcg gccaggcgcc gatcatcgtc aagcgcgaaa
     1501 tcgagggctt tatcctcaat cgtctacagg cggtgctcct gtcggaggcg ttccgcctgg
     1561 tcggcgacgg ctacgtcacg ccgcaggatt tggacaagac gctgaaaaac ggattgggct
     1621 tgcgatggtc gttcatgggc ccgttcgaga cgattgagct caatgctccg gcagggattg
     1681 cggactactg cgggcgctac ggtgcgagct tgagcgcgtt gagcacggca gaccccgcga
     1741 tctacgaagg cgacaacctc gcgcgtattc tctcgcaatg ggaagaagcc ttggcagccg
     1801 atcaagtcgt cgcacgcatg cgctggcgcg atcgccgcct tgcggcgctt cgggcgcatc
     1861 agggttcgca accggctgac tgatggctgg gcttctgcac gcgcccgaga ataccgggag
     1921 gactaccgca ccggcgtcgg aatttgaatc aattcggcga tctgcgcttt cgacagcggg
     1981 gttaggatgt accgcgacgt tatcgcttct ttcatgatgg cgtcgagacc gacgaccttg
     2041 tccggcgcca gcatatcttt cgtgtagaac tcatcacgca aacgcttggc aataccttcc
     2101 gatacgccgg cgaactcggc gtaacgcttg agcgcggcag gatcggaata catccaatcg
     2161 atggtctcgc ggtaggcctg catgaagcgg gcaaggacat ccttgcgctt ctgcaacgca
     2221 tccgcattgg tgatgagcac gcggaccgta tcgcgacgga tggcggaaac gtccgttgct
     2281 cgcgccacga cccggatctt gccctgctcg atggcatcga cgccgaatgg cgcctccgcc
     2341 cacccgacgt ccacgtgacc cgacatgacc tgattgaagg tggcggtcgg tccccctatc
     2401 gcaatcggcc ttgccttgag acggtattgc ttgatgagat cgaacacgtc gtatctgctg
     2461 gccgcattgc tcgtccaata agcgatggtt ttgccgttga tgtctttgat cgccttgatc
     2521 accgaggtgg cctgaacata ccagtagttg gcggtgccgg tcgtgttcgc tccgatcaca
     2581 cgtagcgggg cgcccttggc gtaggcgcgc agcacaccga tcgtgctgac gcccactccc
     2641 acgtcgctgt ttccggatgc caccgacgat tcgacctcgc cgtcccgcgt gtagagcaaa
     2701 tcgagcgtaa tctcgtgctt atcgaagatg ccggcggact tcccgagctc tggcgccgcc
     2761 gagtcccagg ccccccgctg cgcggcggag agcctcagca agtccg
//
LOCUS       DATCWM010000378         3878 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_143360, whole genome shotgun sequence.
ACCESSION   DATCWM010000378 DATCWM010000000
VERSION     DATCWM010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3878)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3878)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3878
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143360"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            58..743
                     /gene="purN"
                     /locus_tag="VIQ50_07235"
                     /pseudo
     CDS             58..743
                     /gene="purN"
                     /locus_tag="VIQ50_07235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018408680.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
     gene            complement(869..1072)
                     /locus_tag="VIQ50_07240"
     CDS             complement(869..1072)
                     /locus_tag="VIQ50_07240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEY9360209.1"
                     /translation="MQKGTVKWFNPTKGYGFIRPSSGDKDVFVHISAVERAGLSTLNE
                     GQTVEYELVTNRGKTSAENLKVS"
     gene            1492..1998
                     /locus_tag="VIQ50_07245"
     CDS             1492..1998
                     /locus_tag="VIQ50_07245"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEY9360210.1"
                     /translation="MSTLTSDPRALPAGEPRPVISPLASFYWHARDLGWLVVRLTAGG
                     MLLAHGIMKMMPMAERGFAATIEAFATGSMARRGIEPAIVAAYVVFFIETIGAVLIIL
                     GLFTRFIAAAAAIEFAVITFVAHWPQGFAWSRGGWEYPLFWGLILFAIALRGGGPYSL
                     DRKLGWEL"
     gene            complement(2049..2978)
                     /locus_tag="VIQ50_07250"
     CDS             complement(2049..2978)
                     /locus_tag="VIQ50_07250"
                     /inference="COORDINATES: protein motif:HMM:TIGR03717.1"
                     /note="Members of this highly hydrophobic protein
                     family,regularly are found preceded by the yybP-ykoY
                     manganese riboswitch (see RF00080). A metal cation
                     transport function is proposed; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YjbE family putative metal transport protein"
                     /protein_id="HEY9360211.1"
                     /translation="MDVVLQHMTHGPFWTGVLQIILLNIILSGDNAVVIAMACLTLPP
                     KQRVWGMILGSGVAVLLRIILTFVISEAMEFSYVTLVGGALLFYVATKLVTEDADSDD
                     DGVERAQTLWRAMIIVAIADIVMSLDNVLAIAGSAKNAAAQVDLAHATAIKSTLILFG
                     LATSIPLIIAGSGILMLLLERYRVLIWGGGALLGWVAGELMASDSAMAEWFSEPVQHQ
                     LHIWSGPVGGILVIVMGYILVSRHRRLILDEILAGVALLIWIFVDRVNDTMFGGAHPD
                     LVRIWTIRGAAFALMIVGYAVARRQWHIEHKEV"
     gene            complement(3121..3543)
                     /gene="ndk"
                     /locus_tag="VIQ50_07255"
     CDS             complement(3121..3543)
                     /gene="ndk"
                     /locus_tag="VIQ50_07255"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HEY9360212.1"
                     /translation="MPIERTFSIIKPDATARNLTGAINDLIERTGLRIVAQKRTRISR
                     EQAEKFYAVHRERPFFRELVDFMISGPVVVQVLEGENAIVRYREVMGATDPAKAAPGT
                     IRKVHAKSISENSVHGSDAPDTAQQEIAQFFSGNEIVG"
BASE COUNT          758 a         1206 c         1191 g          723 t
ORIGIN      
        1 tggtccggcg atggcgagcc tcgagcgcgg aaggcctcgg tctttactgg tgagcgcatg
       61 gccaagaagc gcgtcgctgt gttgatctcc ggccgcggct ccaacatggc ctcgctgatc
      121 gaggcggcga aggagccttc ctatcccgcc gagatcgcgg tcgtggtctc aaacctgccg
      181 gacgcgtcgg ggctggcgcg cgcacaggcg gattcaattc ccacggcggt gtcgaccatc
      241 gcccgcacgg caaagatcgt gccggcttcg agcgcgcgct ccaggcggtg ctcgatgcgc
      301 atggcgtgga gatcgtttgt ctcggcggtt tcatgcggct gttgacgcca aagttcgtgc
      361 tgcattggca aggccgcatg ctcaacatcc acccaaccct cttgccttcg tttccaggtc
      421 tcgatccgca cgggcaagcg ctcaaggccg gggtgaagat atcgggcgcc accgttcatt
      481 tcgtcgtgcc cgagacggat gccggtccca tcattgcgca agcggcggtg ccggtgcgcg
      541 acgacgaccg cgccgaaacg ctcgctgccc gcgtcctgga ggtcgagcat cgactctatc
      601 cgctggcgct caggctcgtg gcggaagggc gcgtcaagat cttggccggc cgctgcctga
      661 tcgagggagc acatccgggg aaaggcgctt tgatggttcc ggagacggag cagcgccaag
      721 ctgggaagag tggaagagaa tagggcctgc gttttaccgg gtgtcccgcg tcgccgccga
      781 gcttccatgg cgccaaaaca aacccccggc gcaaggccgg gggctacggg tagttcgcac
      841 ggaccaaccg gcccgctcgc tgatcgcatc atgaaacctt cagattctcc gctgaggtct
      901 tgccgcgatt ggtcacgagc tcgtattcga cagtctgacc ctcgttgagc gtgctcagac
      961 cggcacgctc gaccgccgag atatggacga acacgtcctt gtctccgctt gaaggacgaa
     1021 tgaacccgta gcctttagtt ggattgaacc atttgacggt gcccttttgc atcgtctgtc
     1081 tcctagtcag tgaagtctcc agtgagcgaa gcacgaccgc atcgctgcgc accgcgccac
     1141 aacccgggtt ttgggaagat ccgaaacgaa tgcggccgaa cggcacgcag cggccggagc
     1201 ggccaaaatc cgaattgcgc gcaagaaaaa tgaaaaatgc ggccttagca aggcttccgg
     1261 ggcgcattca cgctgcggga cggcctcgcc tgcctgcgga aattgcgagc gccaaaatgg
     1321 ctccatcgcg gcgaggagcc gccggcctcg tcttgattcg cggcgacttg catgaacact
     1381 catgacgcag agcattcagg cgctattatc gcgagcttgg gcggaaattt cgccgcccgg
     1441 tcgtgtgtta tgatccatag cgaacttgaa tgccaaatta gggggaaacg catgagcaca
     1501 ctcacgtccg acccacgcgc ccttccggca ggcgaaccga ggccggtcat ctcgcctcta
     1561 gcctcgtttt attggcatgc ccgagacctc ggctggctgg tcgtacgcct cacggcgggc
     1621 ggaatgctgc tggcccacgg catcatgaag atgatgccca tggcggagcg gggctttgcc
     1681 gcgaccatcg aggcctttgc cacaggcagc atggcgcgcc gcggaatcga gcccgcgatc
     1741 gtcgccgcct atgtggtgtt cttcatcgag acgatcggcg cggtgctgat catcctcggg
     1801 ctattcaccc gcttcatcgc cgccgccgcg gcgatcgagt tcgccgtcat cacgttcgtg
     1861 gcgcactggc cgcagggctt cgcgtggtcg aggggtggat gggaataccc gctgttctgg
     1921 gggctgatcc tcttcgccat cgctctgcgc ggcggcggcc cctattcact cgaccgcaag
     1981 ctcggttggg agctctaacc ggtcgcgaga gcagcagcac gccggcgcaa ctggcccgta
     2041 ggggcggatc agacttcttt gtgctcgatg tgccactgcc ttcgagcaac ggcatagccg
     2101 acgatcatca gcgcgaaggc ggcgccgcga atagtccata tccttacgag atcagggtgg
     2161 gcgccgccga acatcgtgtc gttcaccctg tcgacgaaaa tccagatcag tagcgcgacg
     2221 ccggcgagaa tttcgtcgag tatcaaccgg cgatgcctgc tgactaggat gtaacccatg
     2281 acgatcacga gaattccgcc gaccggacca ctccaaatat gcagttggtg ctgcacaggc
     2341 tcactgaacc actcagccat tgccgaatca gacgccataa gctcgcccgc aacccacccg
     2401 agaagcgcgc cgccgcccca gatcaggact ctgtaacgct ccaaaagcag cataaggatc
     2461 ccgctgccgg cgatgattaa tggaatgctg gtggccaagc caaagaggat cagcgtcgac
     2521 ttaatcgccg tggcatgcgc gagatccacc tgggctgcgg cattcttggc cgatccggca
     2581 atcgcgagca cattatccag actcatgacg atgtcagcga tggcgacgat aatcattgca
     2641 cgccacaggg tttgtgcgcg ctcgacgcca tcgtcgtcgc tgtctgcgtc ctcggtaacg
     2701 agcttagtcg caacgtaaaa gaggagcgcg ccgccgacga gcgtaacgta cgaaaattcc
     2761 attgcctcgg agattacgaa cgtcaaaatg atacgcagga gcactgccac accggaaccg
     2821 aggatcatgc cccagacccg ttgcttcgga ggcagagtca gacaagccat cgcaatgaca
     2881 acggcgttgt caccggagag gataatattg agaaggatga tctgaagcac accggtccag
     2941 aacgggccat gcgtcatatg ttgtagtaca acgtccaccg gcgtcccctg tgtgtaccta
     3001 ttcgttcgat ctgtttgggg cgttcctcgc ccagccgcaa taaccgcgta acctagcggt
     3061 gtttcccgcg ccttgaccag cacctaaggg cggcgaaagg tcacgccgga cggaacgcct
     3121 tcacccgacg atttcgttcc cggaaaagaa ttgcgcgatt tcctgctgcg ccgtgtcggg
     3181 cgcgtccgac ccgtgcaccg aattctcgct gatcgatttc gcgtggacct tacggatcgt
     3241 gccgggagcc gccttggcgg gatcggtcgc gcccatgact tcgcgatacc tcacaatggc
     3301 attttcacct tcgagcactt gcacgaccac cggcccggag atcatgaaat cgacgagttc
     3361 gcggaaaaac ggccgttcgc gatgcactgc atagaatttt tccgcctgct cccggctgat
     3421 gcgggtgcgc ttctgcgcca cgatgcgcaa accggtgcgc tcaatcaaat cgttgatcgc
     3481 tccggtcaga ttgcgggcgg tggcatcggg cttgatgatc gaaaaggtgc gctcgatcgg
     3541 cattgcgttt gttcttcagg gaaagaggcg gggcagctgc gactgcggcg gcttatagcg
     3601 agcgtaccgt agcgcggcaa ggcgccgctt cagtaacgcg gcaacggcgc gcaccgggcg
     3661 cgccggtagc gcgaaggtcg gatggcgctt tcatcgctgc gccgttgaac ccggaggatc
     3721 gttcgcccga cagactggca ggatgtgcga gcacatcccc ataaaaccag gagaaaaccc
     3781 atgatccgca agacgattct cgctgcggcc actttcgccg ccatcggcgc cgccgcgctc
     3841 atgccgaccc aagcctccgc cggcggaggt ggcaaagg
//
LOCUS       DATCWM010000379         2742 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_418667, whole genome shotgun sequence.
ACCESSION   DATCWM010000379 DATCWM010000000
VERSION     DATCWM010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2742)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2742)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2742
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_418667"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1145)
                     /gene="tig"
                     /locus_tag="VIQ50_07260"
     CDS             complement(<1..1145)
                     /gene="tig"
                     /locus_tag="VIQ50_07260"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005854 - nascent polypeptide-associated
                     complex [Evidence IEA];
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0051083 - 'de novo' cotranslational protein
                     folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HEY9360213.1"
                     /translation="MEVTETLSDGLKREFQVQVPAADLAARVTERLGELKDRVQLRGF
                     RPGKVPVNHLRKLYGKAVMAETIEAVIRELNAKIVSERGLKLAMEPKVTIPNEATAVE
                     NVFGGQSDLAYTLALEILPKIELADFQGTKLERQVAEVTDAQINEALDKIAEQNRPFA
                     AKAEGAKAEKGDRVVIDFAGRIDGAPFEGGTGGDVGVNIGAGTFIPGFEDQLVGMAAG
                     ATGVVKVTFPENYVNSQLAGKDVEFDVTVKSLEAPGKVTLDDSFAKSLGLESLDKLKE
                     AVKARLQQEHAALSRQKLKRDLLDKLDEMHKFALPPTLAEDEFRNVWTAVEGDLKAQG
                     RTFADEGTTEEKAREEYRGIAERRVRLGLVLAEIGEKNKITVTEGEIT"
     gene            complement(1216..1300)
                     /locus_tag="VIQ50_07265"
     tRNA            complement(1216..1300)
                     /locus_tag="VIQ50_07265"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1264..1266),aa:Leu,seq:tag)
     gene            1529..2512
                     /locus_tag="VIQ50_07270"
     CDS             1529..2512
                     /locus_tag="VIQ50_07270"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9360214.1"
                     /translation="MSRVTSRRRLLAAAIALTAFTAAGTEGRAQVWPAKPIRVIVPLT
                     AGSATDVMARLVMDQVSARLGQPIIVENRPGAGNTIGMSAVAKAEPDGHTVLANSSTH
                     TVTPATRSNLGFEMTDLAAIVPLGNMPVVMVVNPAKGYKTLTDFVVAARAKPGMVNYA
                     SAGAGNSSHLNGERFRLAAGFEAVHLPFKGAPEALTEVVAGRADFYFAPLINALPLLK
                     DGQLQALAVSGTARASALPDVPTTVEAGYPNSEYNFWAGVFAPAKTPADIRRRLYAEI
                     ATALQHPAIRQKLTDLGADPMPLTSEQFEALVRREIETNTQLAKAAGIKVN"
     gene            complement(2529..>2742)
                     /locus_tag="VIQ50_07275"
     CDS             complement(2529..>2742)
                     /locus_tag="VIQ50_07275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013895676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0052855 - ADP-dependent NAD(P)H-hydrate
                     dehydratase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HEY9360215.1"
                     /translation="LATAGSGDVLAGITAGCLAQGMPAFEAASAAVWLHGEAGNAAGP
                     GLIAEDLPEAMPAIFRQLVAQLASRR"
BASE COUNT          463 a          917 c          845 g          517 t
ORIGIN      
        1 gtgatctccc cctcggtcac cgtgatcttg ttcttctccc cgatttccgc gagcacaagg
       61 ccaagccgca cccgccgctc ggcgatgccg cggtactcct cgcgcgcctt ctcctcggtc
      121 gtaccctcgt cggcaaaggt gcgtccctgc gccttgaggt cgccctcgac cgcagtccag
      181 acgttgcgaa actcgtcctc ggccagcgtc ggaggcagcg cgaacttgtg catctcgtcg
      241 agcttgtcga gaaggtcgcg tttgagcttc tgccggctga gcgccgcgtg ctcttgctgg
      301 aggcgcgctt tgaccgcctc cttgagttta tcgagcgatt ccaagcccag cgatttggca
      361 aacgaatcgt cgagagtgac cttgcccggc gcttcgagcg atttcaccgt tacgtcaaat
      421 tcgacgtctt ttcccgcaag ttgcgagttc acgtaatttt cgggaaaggt gaccttcacc
      481 acgccggttg ccccggcagc catgccgacg agttggtcct cgaatccggg aatgaaagtc
      541 ccggctccga tgttgacgcc tacgtcgcct ccagtgccgc cttcgaacgg tgcaccgtcg
      601 atcctgccgg cgaaatcgat gacgacgcgg tcgccttttt ccgccttcgc cccctcggct
      661 ttggcggcga acggccggtt ctgttcggcg atcttgtcca gggcttcatt gatttgcgcg
      721 tccgtgacct ccgcgacctg ccgctcgagc ttggtgcctt ggaaatccgc cagctcgatc
      781 ttgggcaata tctccagcgc gagggtgtaa gcgaggtcgg attgtcctcc gaacacgttc
      841 tcgaccgcgg tggcttcgtt cggaatcgtg accttgggct ccatggcgag cttgaggccg
      901 cgctcgctga cgatcttggc gttaagctcg cggatgaccg cctcgatggt ttcggccatc
      961 accgccttgc cgtaaagctt cctcaggtgg ttgaccggga ccttgcccgg acggaagccg
     1021 cgcagctgga cgcggtcctt gagctcgcca agccgctcgg tgacccgcgc cgcgagatcg
     1081 gctgccggca cctggacctg aaattcgcgc ttgaggccgt cggaaagagt ctcggtgact
     1141 tccatgttgg caaatctact attggacgat cggtgtagtc ccctccacca gggccgaagc
     1201 gcctgtatag cggcgtggtg cgggcggagg gatttgaacc cccacgactt tcgtcacggg
     1261 aacctaaatc ccgcgcgtct accagttccg ccacgcccgc gtcggcgacg ccggcttgcg
     1321 ctgcggccgg gcggcgcggc ttatatcacg gcaaaactcc gcggcgcacg acaaaaatag
     1381 gcgcgtgtcc gggccttctc aaccgccgat tttgctcgcc ctgctcggcc gcagcgatgc
     1441 ggaccgcgcg ccgacatggt atgccggcat cgtatattgc gggctgatca gcgatccaac
     1501 cagcaaaacc aaaccgcaag gagcacaggt gtcgagggtc acgtcacgtc ggcggttgct
     1561 tgccgcggca attgcactga ccgcattcac cgccgccggg acggaagggc gggcgcaagt
     1621 ctggccggca aagccgatcc gcgtgatcgt gcctttgacc gccggcagcg ccaccgatgt
     1681 catggcgcgc ctcgtcatgg atcaggtatc ggcgcggctc ggtcagccga tcatcgtgga
     1741 aaaccgtccc ggcgccggaa acacgatcgg catgagcgca gtcgcaaaag ccgagcccga
     1801 cggccacacc gtcctcgcca attcctcgac ccacaccgtc acgccggcga cccgctcgaa
     1861 tttgggcttc gaaatgaccg atctcgcggc catcgttccg ctcggcaaca tgcctgtggt
     1921 gatggtggtc aaccccgcca aaggctacaa gacgctcacc gatttcgtcg tcgcggcaag
     1981 ggccaagccc ggcatggtca actacgcctc ggccggcgcg ggaaattcct cccacctcaa
     2041 cggcgagcgg tttcgattgg cggctggctt cgaggcggtg catctgccgt tcaagggcgc
     2101 gccggaagcg ctgaccgagg tcgtcgccgg gcgcgcggat ttctactttg cgccgttgat
     2161 caacgcattg cccttgctga aggacggcca gctgcaggcc ctcgcggtga gtggaacggc
     2221 gcgcgcgtcg gctttgccgg acgtgccgac gactgttgaa gctggatatc ccaactcgga
     2281 atataatttc tgggccggag tcttcgctcc ggcaaaaact ccggccgaca tccgcaggcg
     2341 cctctatgcg gaaatcgcga ccgcgctcca gcacccggcg atccgccaga aactcacgga
     2401 cctcggagcc gatccgatgc ctttgacttc ggagcaattc gaagcgctgg tgcgtcgcga
     2461 gatcgagacc aacacgcagc tcgcgaaggc cgcgggcatc aaggtgaact gatggcaagc
     2521 ctcgaggctc atcgccggga agcgagctga gcgacgagtt ggcgaaaaat cgcgggcatc
     2581 gcctcaggta gatcctcggc gatcagcccc gggccggccg cattccccgc ttctccgtgc
     2641 agccagaccg ccgccgaggc ggcttcgaat gccggcatgc cctgggcgag gcacccggcc
     2701 gtgatgcccg ccagcacgtc gcccgatcct gcggtggcga gc
//
LOCUS       DATCWM010000380         2088 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_73268, whole genome shotgun sequence.
ACCESSION   DATCWM010000380 DATCWM010000000
VERSION     DATCWM010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2088
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73268"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(14..811)
                     /locus_tag="VIQ50_07280"
     CDS             complement(14..811)
                     /locus_tag="VIQ50_07280"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018262818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9360216.1"
                     /translation="MRSPERPHVVIRGVTKRFQVGDGAVEALGRIDVTIATGAFVCLI
                     GASGCGKSTLLRIVAGFEEPTSGEVLVDAKPVTAPGSDRGMVFQDYALFPWMTVRQNI
                     GFGPRQRQLPRKEVDDIADEFVRLVGLESAANRYPSQLSGGMKQRVAIARVLANNANI
                     LLMDEPFGALDALTREQLQRELLQIWSRTRVTVVFVTHSVEEAALLADRVLVMSAGPG
                     RIESDINVDLPRPREVSSPEFNAVRRELARRLTSHMASARARVDELT"
     gene            complement(804..1673)
                     /locus_tag="VIQ50_07285"
     CDS             complement(804..1673)
                     /locus_tag="VIQ50_07285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003601441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9360217.1"
                     /translation="MSEQVTALPDATSHSIPQAPSPVRRRSRLAEKARAIALGAGFPL
                     VLILLWDRAVALTGTRLVPSPRQVAVMMYDFSFGGVYDDAFSATILTHIWKSMTRVYG
                     GFFLAALIGIPLGLMIGRIHVLRQLLDPTINLLRPIPVTAWLPLSMIFFGLGPNAAIF
                     LVFLGAFYPILLNTMFGVRSVDVRLFEAAAMLGCSGPAMFRQIVFPASLPAIFNGLRI
                     AHGFAWILIVVGEMTGVPTGLGSVIMDGRTLSRTDLVVTGMIVIGVCGFVTDRIIVVI
                     SNRVLQWSPQHHA"
     gene            complement(1689..>2088)
                     /locus_tag="VIQ50_07290"
     CDS             complement(1689..>2088)
                     /locus_tag="VIQ50_07290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9360218.1"
                     /translation="GAEPAAGISLANGTGRLVEYPYSTPIGPLNMILSASETVVKENP
                     ARIKLIVDMHRQAVDYAMANPAQIVEMAMQKLGQQKKSVELAVPNVELAWKLDDVFME
                     RANAYTRLMFENKQIRQVPDLNRHITKQFM"
BASE COUNT          389 a          658 c          693 g          348 t
ORIGIN      
        1 gcggatgttt cagtcatgtc agctcatcca ctcgagcgcg cgcggacgcc atgtggctcg
       61 tcagccgccg cgccagctcg cggcgcaccg cgttgaactc gggcgaagac acctcgcgcg
      121 gtcgcggtag atcgacgttg atgtcgcttt cgatccgtcc cggtccggcg ctcatgacaa
      181 ggacgcggtc ggcgagcagc gccgcctcct caaccgagtg ggtgacgaag acgacggtca
      241 cgcgggtgcg cgaccagatc tgcaacagct cgcgctgcag ctgctcgcgg gtgagcgcgt
      301 cgagcgcacc aaacggctcg tccatcagca ggatgttggc gttgttggcg agcacccggg
      361 cgatcgccac gcgctgcttc atgccgcccg agagctgact cggatagcgg ttggcggcgc
      421 tctcgaggcc gacgagcctg acgaactcgt cggcgatgtc gtcgacctcc ttgcgcggca
      481 actggcgctg gcgcggcccg aagccgatgt tctgccgaac cgtcatccag gggaacagcg
      541 catagtcctg aaataccatg ccgcggtcgc tgccgggcgc ggtgaccggt ttggcgtcca
      601 ccaagacctc gccggatgtg ggttcttcga aacccgctac gatgcgcaac aatgtcgact
      661 tgccgcagcc cgacgcgccg atcaggcaga cgaacgcccc agttgcgatt gtcacgtcga
      721 tccgaccaag tgcctccacc gcgccgtcgc cgacttggaa tcgcttggtg acgccgcgga
      781 tgacgacgtg cggccgctcg gggctacgca tggtgttgcg gactccactg cagcacgcgg
      841 ttgctgatga cgacgatgat gcggtcggtc acgaagccgc acacgccgat gacgatcatc
      901 cccgttacca ccaggtcggt gcgtgagagc gtgcgcccat ccatgatcac cgacccgagt
      961 ccggtgggca cgccggtcat ctcaccgacg acgatcagga tccaggcaaa gccatgggcg
     1021 atgcgaaggc cgttgaagat cgcaggcagc gaggccggaa acacgatctg gcggaacatc
     1081 gcggggcccg agcagcccag catggcggcg gcctcgaaca gccgcacatc gaccgagcgc
     1141 acaccgaaca tggtgttgag caggatcgga tagaacgcgc cgaggaacac cagaaagatt
     1201 gccgcgttgg gacctagccc gaagaagatc atcgacagcg gcagccacgc tgtgaccggt
     1261 atcggccgca acaggttgat ggtggggtcg agcagttgcc gcagaacgtg gatgcgcccg
     1321 atcatcaagc caagcgggat gccgatgagc gcggccagga agaagccgcc atagacccgc
     1381 gtcatcgact tccagatgtg ggtcaaaatg gtcgcgctga aagcgtcgtc atagacgccg
     1441 ccgaacgaga aatcgtacat catcaccgcg acttgccgcg ggctcggaac gagccgcgtg
     1501 ccggtgaggg cgacggcacg gtcccacagg aggatcagca cgagcgggaa gccggcgccc
     1561 agcgcaatgg cgcgcgcctt ctccgcgaga cggctgcgcc ggcgaacagg cgacggtgct
     1621 tgcggtatgg agtgcgatgt agcgtccgga agcgccgtga cctgctcgct caagacgccc
     1681 tcgtttgcct acatgaactg tttggtgatg tggcgattca ggtcgggcac ttgacggatc
     1741 tgcttgttct cgaacatcag ccgcgtatag gcgttggcgc gctccataaa cacgtcgtca
     1801 agtttccagg cgagctccac gttcggcacg gcgagctcga ccgatttctt ttgctggccg
     1861 agcttctgca tcgccatctc gacgatctgc gcgggattgg ccatggcgta gtcgactgcc
     1921 tgccggtgca tgtcgacaat gagcttgatg cgtgcaggat tctctttgac caccgtctcg
     1981 cttgccgaca ggatcatgtt gagggggcca atcggcgtgg agtagggata ctcgaccagc
     2041 cggccggtgc cgttggcgag gctgatgccc gccgccggct cggcgccg
//
LOCUS       DATCWM010000381         3396 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_208012, whole genome shotgun sequence.
ACCESSION   DATCWM010000381 DATCWM010000000
VERSION     DATCWM010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3396)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3396)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3396
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_208012"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..491)
                     /locus_tag="VIQ50_07295"
     CDS             complement(<1..491)
                     /locus_tag="VIQ50_07295"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY9360219.1"
                     /translation="MNDINRRRNLGFFFDQSVARAPDKVAIIDLFGGKERRATYRQLD
                     ERMNSVASMLARLGVTPGERVAMLIGNRTEFIEFFFGAMRAGAIPLPLNTRAAAATLE
                     HIIAEAGCALAVVDPSSHREALAIARNPALRQRLSLGQRAEGFLSFEEEMAKPAAPVD
                     PPV"
     gene            624..1604
                     /locus_tag="VIQ50_07300"
     CDS             624..1604
                     /locus_tag="VIQ50_07300"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9360220.1"
                     /translation="MTIFFRRGLATLAAACLLALLGTSPSPAQQRPKITVSSLTLPVF
                     NPLVWNIMKARGLDAKHGFELDIRPYPSISAFYAAFSTGETEAVIGGPTILQKLYQEG
                     VPLRIFGTGFTLADLVVFAKDPNIKSLADLKGKQLAADMGGSQFQVIKIYTNARGIEL
                     GKDITVVNANFAVARAQLEADRVDAALVIEPLASITLRQNPGWNIIFNGAQGWKEITG
                     QDGWEIVPALRAEAIARVPQAPKMLLAALQDVANVLHKETDAADKIAVDTTKLPPGIL
                     KAAVDSGRLHMIVQPAWEGAVRQSITDMMQRAVKAGFYQNMPDDKIIYAP"
     gene            1594..2367
                     /locus_tag="VIQ50_07305"
     CDS             1594..2367
                     /locus_tag="VIQ50_07305"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY9360221.1"
                     /translation="MHPEEYREAGLDGRFSRQAVLSVLIFAALWEGLSYLAPALGIPA
                     FAIPSFARIGKSLLTITPIDVLVTLARVIGALIASFVLGVALAILMYQSQRLENYLRP
                     MIRLFMAVPVVSWILFAVLWFRGVEFRIAFVLIAVCGPVFLIDAFDAMRNVPRELRRM
                     VRSFRPTALQYFAKLMFPAIVPNLITSWKINLSLAIRVVTIAELVGAVTGVGHQLAVA
                     QELFSVADVFAWTLVLVALLFLLEAVVARVERRVLRWRA"
     gene            2364..3146
                     /locus_tag="VIQ50_07310"
     CDS             2364..3146
                     /locus_tag="VIQ50_07310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009398888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY9360222.1"
                     /translation="MIAPPPIEVRQLRKVFRQTASGEPVVAIDRLDLDIAPREVVAIV
                     GQTGCGKSTLFDLMIGLERPTAGSIFIGGKTPYGDFDHFRGQIATVFQQDRLLPWRSA
                     LDNVKLPLELIRLSDDEQHKRSLFWLERLGLANFARAYPHELSGGMRQRVAIARAFVV
                     QPNILLADEAFGHLDEVTAAELRETFLSLARECGSTAILITHQLEEAIGVGDRIIVLG
                     RAARLFADIDVARWEKREFAILREAIQATLQNNAQDLRLMRA"
BASE COUNT          585 a         1089 c         1073 g          649 t
ORIGIN      
        1 atcacgggcg gatcgacggg cgcggctggc ttggccatct cctcctcgaa ggatagaaac
       61 ccctccgcgc gctgaccgag gctgagccgt tgacgcagcg ccggattgcg cgcgatcgcc
      121 agcgcctcgc gatggctcga cgggtccacc accgcgagcg cgcagccggc ctcggcgatg
      181 atgtgctcga gggtcgccgc tgcagcgcgg gtattgagcg gcagcgggat cgcaccggcg
      241 cgcatcgcgc cgaagaagaa ttcgatgaat tccgtgcggt ttccgatcag catggcgacg
      301 cgctcgccgg gcgtcacgcc aagccgagcc aacatgctgg cgacgctgtt catccgctcg
      361 tcgagctgcc gataggtcgc gcgccgctcc ttgccgccga acagatcgat gatcgccacc
      421 ttgtccgggg cgcgcgcgac ggattggtcg aagaaaaacc cgagattgcg cctacgattg
      481 atgtcgttca tggggatcag gccagcctag cggccgttat gcccgctgac tgatccgcgt
      541 caattcgata tcttgccaag accttttcgc ctcgtgacga ttggagactg cgaggacccc
      601 ctgaaacgca ggaaggaaac tccatgacga tatttttccg tcgcggtctt gcaaccctgg
      661 cggccgcttg cctccttgcg ctgctcggaa cgagcccttc gcctgcgcag caacgaccga
      721 agatcaccgt ttcgagcctg acgctgccgg tattcaaccc gctcgtgtgg aacatcatga
      781 aggcgcgcgg cctcgacgcc aagcacggct tcgagctcga catcaggccc tatccctcga
      841 tctccgcctt ctacgcggcc ttctccaccg gcgagaccga ggccgtgatc ggcggcccga
      901 cgatcttgca gaagctttac caggaaggcg ttccgttacg gattttcggc accgggttca
      961 ccctcgccga tctcgtggtt ttcgccaagg accccaacat caaatcgctc gccgacctca
     1021 agggcaagca gcttgccgcc gatatgggcg ggtcgcaatt ccaggtgatc aagatttaca
     1081 ccaatgccag gggcatcgag ctcggcaagg acatcaccgt ggtcaacgcc aacttcgccg
     1141 ttgcgcgcgc gcagctcgag gccgaccgcg tcgatgcggc gctggtgatc gaaccgctgg
     1201 ccagcattac gctgcggcag aacccggggt ggaacatcat cttcaacggc gcgcaagggt
     1261 ggaaggagat caccgggcag gacggctggg agatcgtgcc cgcgctgcgc gcggaggcga
     1321 tcgcgcgcgt accgcaagct cccaagatgc tgctcgccgc gctgcaggat gtggccaacg
     1381 ttctgcacaa ggaaaccgac gcggccgaca agatcgccgt tgataccacc aagctccccc
     1441 cgggcattct caaggccgcg gtcgacagcg gccgcctgca catgatcgtg cagccggcgt
     1501 gggagggcgc ggtgcgccaa tccatcaccg acatgatgca gcgcgcggtc aaggccggct
     1561 tctaccagaa catgccggac gacaagatca tctatgcacc ctgaggaata tcgagaggct
     1621 ggcctcgacg gaaggttctc gcgccaggcc gtcctctcgg ttctgatctt tgcggcgttg
     1681 tgggaagggc tgtcgtatct tgcgccggcg ctgggaattc ccgctttcgc catccccagt
     1741 tttgcgcgta tcgggaaaag cctgctgacg atcacgccga tcgacgtcct cgtcacgctt
     1801 gcgcgggtca tcggcgcgct gattgcctcg ttcgtgctcg gcgtcgctct cgccatattg
     1861 atgtatcagt cgcaacgcct ggaaaactac ctgcgcccga tgatccgcct gttcatggcg
     1921 gtgccggtgg tgtcctggat cctgttcgcg gtgctgtggt ttcgcggcgt ggaattccga
     1981 attgccttcg tgctgatcgc cgtctgcggg ccggttttcc tgatcgacgc attcgatgcc
     2041 atgcgcaacg tgccgcgtga attgcgtcgc atggtgcgct cgtttcggcc aaccgcgctg
     2101 caatacttcg ccaagctgat gtttcccgcc atcgtgccga acctgatcac cagctggaag
     2161 ataaacttga gcttggcgat ccgcgtcgtc acgattgcgg aactcgtcgg cgccgtcacc
     2221 ggcgtcggcc atcagttggc cgtggcccag gaattgttct cggtggccga tgtgttcgca
     2281 tggacgctgg tgctggtggc gctgctcttc ctgctggaag cggtggtcgc gcgggtggag
     2341 cgacgcgtgt tgcgatggcg ggcatgatcg caccgccgcc gatcgaggtg cggcaactgc
     2401 gcaaggtgtt ccggcaaacc gcctccgggg agccggtggt cgccatcgac cggctcgatc
     2461 tcgatattgc gccgcgcgaa gtggtggcga tcgtcggcca gaccggatgc ggaaaatcca
     2521 ccttattcga cctgatgatc gggctcgagc gccccactgc cggctcgatc ttcatcggcg
     2581 ggaagacgcc ttacggcgac ttcgatcatt tccgtggcca gatcgcgacc gtgttccagc
     2641 aggatcgact gctgccgtgg cgttccgcgc tcgataacgt gaagctgccg ctcgagctga
     2701 tccggctgag cgatgacgag cagcacaagc gctcgctgtt ctggctcgag cggctcgggc
     2761 tcgcaaactt cgcgcgcgca tacccgcatg aactgtcggg cggcatgcgc cagcgcgtcg
     2821 ccatcgcgcg ggctttcgtg gtgcagccca acatcctgct cgccgacgag gcgttcggcc
     2881 atctcgacga ggtcacggca gccgaattgc gggagacgtt tctcagcctt gcccgcgaat
     2941 gcggcagcac cgccatcctc atcacgcatc agctcgagga ggcgatcggc gtcggcgatc
     3001 ggatcatcgt cctcggcagg gcggcacgac tgttcgctga catcgatgtc gcgcgctggg
     3061 agaagcgcga atttgcgatc ctgcgcgagg cgattcaggc gacgttgcag aacaacgcgc
     3121 aggacctgcg gctgatgcgc gcctgaacgg aggccgcatt gtggctttgc acgtcgcgct
     3181 gtgacgaaaa ggtcacacgc gttgcaaatg cagcgtcgcg accgaattct cccattggca
     3241 acgcgcgcaa atcaggtaac gttggtctcg cctaatcatg ggcgtttcct ccttcacttg
     3301 agccccgctt gtcggggctt ttttcttggc tcgagaagca ccgcgcgcgc gtgcgaaccg
     3361 gtccgtcgtg cgcgaacgca atcaaagaat cagcgc
//
LOCUS       DATCWM010000382         3058 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_213391, whole genome shotgun sequence.
ACCESSION   DATCWM010000382 DATCWM010000000
VERSION     DATCWM010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3058
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_213391"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..402
                     /locus_tag="VIQ50_07315"
     CDS             <1..402
                     /locus_tag="VIQ50_07315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010968562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEY9360223.1"
                     /translation="DLMLRALGALERGSLTLTPQAHAGITYANKIAKEETRIVWARPW
                     REVHNHIRGLSPAPGAWFEIGGEDTRVKVLRTSKAEGEGLPGTVLDDNLTVACGEGAL
                     RILELQRAGRQAMKAHEFLRGMSVAAGTRFA"
     gene            411..1151
                     /gene="truA"
                     /locus_tag="VIQ50_07320"
     CDS             411..1151
                     /gene="truA"
                     /locus_tag="VIQ50_07320"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011512060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HEY9360224.1"
                     /translation="MPRYKLTIEYDGRPFVGWQIQDNGASVQGALAAALEAFCGQKLS
                     VHGAGRTDAGVHALGQVGHVDLAKEWDQDTVRDALNAHLRPHPVAILNAQRVDASFDA
                     RFSAIRRHYLYRIVNRRADLTLDRGRAWRISQPLDVPAMQEAARRLVGRHDFTTFRNV
                     ECQAKSPVKTLDQLDVHRAADEIRVVTSARSFLHSQVRSMVGALALVGEGKWTADDVS
                     AALARRDRAACAPVAPPDGLYLARVDYA"
     gene            complement(1175..2341)
                     /gene="dapE"
                     /locus_tag="VIQ50_07325"
     CDS             complement(1175..2341)
                     /gene="dapE"
                     /locus_tag="VIQ50_07325"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009014 - succinyl-diaminopimelate
                     desuccinylase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HEY9360225.1"
                     /translation="MNPPRTDPTALARDLLRCPSVTPAEAGALGLIEGVLKAAGFTVH
                     RITFADPGTAPVENLYARIGTASPHFAFAGHVDVVPPGEQAKWTHPPFAGDIADGTLY
                     GRGAVDMKGGIASALAATLDYLAAHGGRPKGSISFLITGDEEGIAVNGTVKLVQWAAE
                     RGETFDHCILGEPSNAETIGDTIKVGRRGSLNGTLVVTGKQGHVAYPERAENPVRGLI
                     ALMGALMASPLDHGSAQFDASNLEFTSIDIGNPVVNLIPGEARARFNIRFNDRHNQTS
                     LKALIEKRAADAAAGRIRWHIEWEPSNADSFVIKPGPFLDLVCAAIRDVTGKQPKLST
                     SGGTSDARFIKNYCSVLEFGLVGQSMHQVDERTTVADLATLTAVYRRVLERYFG"
     gene            complement(2359..2679)
                     /locus_tag="VIQ50_07330"
     CDS             complement(2359..2679)
                     /locus_tag="VIQ50_07330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013216943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TM2 domain-containing protein"
                     /protein_id="HEY9360226.1"
                     /translation="MQAELPQGTRQTIQQQGGLSSDTRALMLFEANKKTALVAYILWF
                     FLGLFGGHNFYLKRTGVAVAQLILTLTVVGSLITIVWVLIDAFLIPGWVRNQNNLLAA
                     QLGA"
     gene            complement(2732..>3058)
                     /locus_tag="VIQ50_07335"
     CDS             complement(2732..>3058)
                     /locus_tag="VIQ50_07335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005768109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DapH/DapD/GlmU-related protein"
                     /protein_id="HEY9360227.1"
                     /translation="PLQAGPVILEDNCFVGARSEVAEGVIVREGSVLSMGVFIGASTR
                     IVDRDSGEIFRGEVPAFSVVVPGSLPGKPSKKGESGPNLYCAVIVKRVDETTRAKTSI
                     NELLRD"
BASE COUNT          515 a          958 c         1010 g          575 t
ORIGIN      
        1 gacctcatgc tgcgcgcgct cggcgcgctc gagcgcggct ctctcacgct cacaccgcag
       61 gcgcacgcgg gcattaccta tgcgaacaag atcgccaagg aggagactcg aatcgtctgg
      121 gcgcggccct ggcgcgaggt gcacaaccac atccgcggcc tgtcgcctgc tccgggcgcc
      181 tggttcgaga tcggcggcga ggatacgcgc gtgaaggtgc tacgcacgag caaggcagag
      241 ggtgaaggct tacccggcac cgtgctcgac gacaatctca ccgtcgcttg cggggagggg
      301 gcgctgcgca tcctggaatt gcagcgcgcc ggccgccagg caatgaaggc gcacgagttc
      361 ttgcgcggca tgagcgttgc tgccggcacg cggttcgcgt aggccgcgcc atgcctcgct
      421 acaagctcac catcgaatac gacggccggc cgttcgttgg ctggcagatc caagataatg
      481 gtgcttcggt gcaaggcgcg ctggccgccg cgctcgaggc tttttgcggg cagaagctga
      541 gcgtgcacgg ggcggggcgc accgacgccg gggtgcatgc cctcgggcag gtcggacatg
      601 tcgatctcgc caaagagtgg gatcaagaca ccgtgcgtga tgcattgaac gcgcatctgc
      661 gcccgcatcc ggttgccatc ctcaatgcgc agcgggttga cgcctcgttc gatgcgcgct
      721 tttcagcaat ccgtcgccat tatctctatc gcatcgtcaa ccgccgggcc gatctgacgc
      781 tggatcgcgg ccgtgcctgg cgcatttccc agccgctcga tgtcccggca atgcaggagg
      841 cggcgcggcg cctcgtcggc cggcacgatt tcaccacctt ccgcaacgtc gaatgccagg
      901 cgaaatcacc ggtaaagacg ctcgaccaac tcgacgtgca tcgcgccgcc gacgagatcc
      961 gagtcgtaac ttcggcgcgc tcgttcttgc attcccaggt tcgctcgatg gtcggagcgc
     1021 tcgcgctcgt cggcgagggc aagtggacgg cggacgatgt ctccgccgct ctcgccaggc
     1081 gcgatcgcgc tgcctgcgcc cctgtcgcgc cgcccgatgg gctttatctg gcgagggtcg
     1141 attacgcgtg acgggctggc gctcgtacgc gcactcagcc gaaataccgt tcgagcactc
     1201 tgcggtatac cgcggtcaat gttgcgaggt cggcgacggt ggtccgctcg tcgacctgat
     1261 gcatgctttg ccccaccagg ccgaattcga gtaccgaaca gtaattcttg atgaagcgcg
     1321 cgtccgaggt gccgccgctg gtggagagct tgggttgctt tccggtcacg tccctgatgg
     1381 ccgcgcagac gagatcgaga aacgggccag gtttgatgac gaaggaatcg gcgttcgacg
     1441 gctcccattc gatgtgccag cggatgcgtc cggcggctgc gtcggcggcg cgcttttcaa
     1501 tcagcgcctt gagggaggtc tggttgtgac gatcattgaa gcggatgttg aatcgcgcac
     1561 gcgcctcgcc ggggatgaga ttgacgaccg ggttgccgat gtcgatcgag gtgaattcca
     1621 ggtttgaggc gtcgaattgc gcgctgccgt ggtcgagcgg gctcgccatc agcgcgccca
     1681 tcaacgcgat caagccgcgc acgggatttt cggcgcgttc gggatacgcg acgtggccct
     1741 gcttgccggt gacgacgagc gtgccgttga gcgagccgcg ccggcccact ttgatggtgt
     1801 cgccgatcgt ctccgcgttg cttggttcgc cgaggatgca atggtcgaag gtttcgcccc
     1861 gctcggccgc ccattggacg agcttgacgg ttccgttcac ggcgatgcct tcctcgtctc
     1921 ccgtgatcag gaacgagatc gatcccttcg gccggccgcc gtgtgcggcg agataatcga
     1981 gcgtggcggc cagcgcgctg gcgatccccc ctttcatgtc caccgcgccg cgtccgtaga
     2041 gcgtgccgtc ggcgatgtcg ccggcgaacg gcggatgcgt ccatttcgcc tgctcgcctg
     2101 gcggcaccac gtcgacgtgg cctgcgaacg cgaagtgtgg gctcgcggtg ccgatgcggg
     2161 cgtagaggtt ttccaccggt gcggtcccag ggtcggcgaa ggtgatgcga tgcaccgtaa
     2221 aacctgccgc tttcagcacg ccttcgatca ggccgagcgc accggcttcc gccggcgtca
     2281 ctgagggaca gcgcaggaga tcgcgggcga gcgcggtggg atcggtgcgc ggcggattca
     2341 tcgggccggc ttttgcacct acgcgccgag ctgtgcagcg aggaggttgt tctgatttct
     2401 cacccacccg gggatcagga atgcatcgat gaggacccaa acgattgtga tcaacgaccc
     2461 tacgacagtg agtgtcagga tcagttgggc aaccgcgacg ccggtgcgtt tgagatagaa
     2521 attatggcct ccgaacagcc ccaagaaaaa ccacagtatg taggcgacca gcgcggtctt
     2581 tttgttcgcc tcgaacagca tcaaggcgcg cgtgtcgctc gacaggccgc cctgctgttg
     2641 aattgtctgc ctcgtgcctt gggggagctc ggcttgcatg accttctcct gatgcgaaag
     2701 gtcgtgatta tgtgatgagg tgccgctcgg ctcaatcccg cagcaattca ttgatcgaag
     2761 tctttgcgcg ggtcgtctcg tcgacgcgct taacgatcac ggcgcaatag aggttcgggc
     2821 ccgattcacc tttcttgctc ggcttgcccg gcaacgagcc gggaacgacg accgaaaagg
     2881 cgggcacctc accccgaaat atctcgccgc tgtcgcgatc gacaatccgc gtggaggcgc
     2941 caatgaagac gcccatggaa agaaccgagc cctcgcgtac gatcacgcct tcggcaacct
     3001 ctgagcgtgc gccgacgaag cagttatcct ccaggataac tgggcccgcc tgtagcgg
//
LOCUS       DATCWM010000383         3548 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_434855, whole genome shotgun sequence.
ACCESSION   DATCWM010000383 DATCWM010000000
VERSION     DATCWM010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3548
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_434855"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1511
                     /locus_tag="VIQ50_07340"
     CDS             <1..1511
                     /locus_tag="VIQ50_07340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360228.1"
                     /translation="ADHLARPFIAWPVREGTLDLGTRAALQIAQRVHDTLPSRVVASP
                     GRAEALTPLLVGLGNTSVPQVAARSKATTNRIGRSLPFSPIPSRVGFPLGLGLPQPAR
                     AFSAAASTTTATARLASRLRFETEVSRTVTAAVTTSHALENRAVAMAVSQVVTGIGVA
                     GLTTTPDRPQLDFTRAQLLTTVAPARTVTAYAYARLRNPPSWLAPDWFKDGRITPIMA
                     APRFDRAMFAALHDYDRDWLIPGMDKIELTDFVTTLETNPEFTETFLIGLSDEMGREL
                     LWRGYPTDQRGTYFYRFWNEDRDELAKPIHRFDPTPLQTHLIGSGGTRVVLVARGEVI
                     RRYPDLLFHALRTSHTGKGGEPVFADPKSDPASVAPILFHHHLAPDILLVGFDLSPDE
                     IRRTTPYRWWFVLAQNPSAPAFGLDLTTEGNPAATDGVKRNDLDWNDLGALTDGRFLS
                     ASARTLSIKDDQSTPQLTTWPGNAAIVARTLLQNPARAAFDAPKLIAPALPT"
     gene            1514..>3548
                     /locus_tag="VIQ50_07345"
     CDS             1514..>3548
                     /locus_tag="VIQ50_07345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360229.1"
                     /translation="MPASRLTQLRSLQRDLSHRAAERATLIRRIAAHNAELQAAKEEI
                     ARQVSLGDTARAEELRAEQERIAAARRQRVAQLAQLDDEVRDALGRGIFRLDSGDADP
                     AVPLLLLPVRLETRFSDDGTALRVRIYPDDVHIDALDRGLTEDERAAGKAYWTAVWRA
                     TEEEAGTAWRTLVTAAGKLRAQWVALALRPTNLERRMTEPAPEFSEISPRNRHAAVAR
                     LLPDAFTAVVVQGDERRTQTGHAILPQVTVGIFSNDGTELSEVQGIKVVKGAEWLVDY
                     EEAVRVGMAVTVPLARPNEKVDRLLVYGIRHSLNPTSAPAELASLFEAHRCTDGLAFV
                     PQGTPTNNTESDRAGWQRRTDPRPPPRDPGVAPNEHANSAVLAAALGLDAQALADLDY
                     SDAPEQARATAMNISLWNPSWGGFLDKVNRVTKEGATLSDSAREETRIFHRDFVRGRG
                     PLPALRIGSQPYGILPVSSVERRWKTERGDSFEAALLLILERLRRRWRQCLEKVPRIG
                     SGPIDDALKELLASSPVSFALRVRSVISSGFAQIAPEITDVDPDDLAVERLINELVFE
                     EISNASLEYPTGSLGESRPLALPLVDESDPAVIDAILNGQSPGAKSVLQALLELALNR
                     AQKEVESNGAAGRIAEIVSHASTLSAADREQTLAVASRAETAAPSILFAEAKRV"
BASE COUNT          609 a         1202 c         1091 g          646 t
ORIGIN      
        1 tggctgatca tctcgcgcgt cctttcattg cctggcctgt gcgcgagggc acgctcgatc
       61 tcggcacacg cgccgcgctg cagatcgccc agcgcgtcca cgacacgttg ccgagtcggg
      121 tcgtcgcaag ccccgggcgc gccgaagcgc tcacgccgct gctcgtcggc ctcggcaata
      181 cgagcgtgcc ccaagtcgcg gcgcgctcaa aagcgaccac caaccgcatc ggccggagtc
      241 ttcctttttc gcccatccct tcccgcgtcg gttttccttt ggggctcggc cttccgcagc
      301 ccgcgcgcgc cttcagtgcc gccgccagca cgacgaccgc gactgcgcga ttagcgtcgc
      361 gtttgcgttt tgaaaccgaa gtctcacgca ccgttacggc ggcggtgaca acgtcccacg
      421 cgctcgagaa tcgcgccgtg gcgatggcgg tttcgcaggt tgtcaccggc ataggcgtcg
      481 ctggcctaac gacaactccg gatcgcccgc agctcgattt cacgcgcgcg cagctcctca
      541 ccaccgtcgc gcccgcccgc accgtcaccg cctacgccta cgcgcgcttg cgcaatccgc
      601 cttcgtggct cgccccggac tggttcaaag atggccgcat cactccgatc atggccgctc
      661 cgcgtttcga tcgcgccatg ttcgcggccc tccacgacta cgatcgcgac tggcttatcc
      721 cggggatgga caagatcgag ctgacagatt ttgtcaccac cctcgagact aatccggaat
      781 tcaccgagac gttcctcatc ggcctttccg atgaaatggg gcgcgagttg ttatggcgcg
      841 gttacccgac cgatcagcgt ggcacttatt tctaccgctt ctggaatgag gaccgcgacg
      901 agctggcgaa accgatccat cgattcgacc cgacgccgtt gcagacgcat ctcatcggct
      961 ctggcggcac gcgcgttgtc ctggtggcgc ggggagaagt gattcgccgt tatcccgatc
     1021 tgctgttcca cgctttgcgc acctcgcaca ccggcaaggg cggcgagccg gttttcgccg
     1081 atccgaaaag tgatcccgcc tcggtcgcgc cgattctgtt tcatcatcat ctcgcgcccg
     1141 atatcctgct cgtcggcttc gatctttcgc ccgatgaaat ccgccggacc acgccgtatc
     1201 gctggtggtt tgtcctcgcg cagaatccga gcgcgcccgc ttttgggctc gacctaacga
     1261 ctgaaggaaa cccggccgcg actgacgggg tgaagcgaaa cgatctggat tggaatgatc
     1321 tcggcgcgtt gaccgacggg cggtttcttt ccgcctcggc gcgcacgctt tcgatcaagg
     1381 acgatcaaag cacgccgcag ctcacgacct ggccgggcaa cgccgcgatc gtcgcgcgca
     1441 ctcttttgca aaatcctgcc cgcgccgcct tcgacgcgcc caagctcatc gctcccgcac
     1501 ttcctaccta acgatgcctg cttcacgcct cactcaattg cgcagcttgc aacgcgatct
     1561 cagccatcgc gccgcggagc gcgcgacgct catccgacga atcgccgcgc acaatgcgga
     1621 gctgcaggcc gccaaagagg agatcgcgcg ccaggtctcg ttaggcgata cggcccgcgc
     1681 ggaagagctg cgggccgaac aggaacgaat cgcggcggcg cggcgtcaac gagtcgcgca
     1741 actcgcgcag ctcgatgacg aggtgcgcga cgcgctcggc cgcggcattt ttcggctcga
     1801 ttccggcgac gccgatccgg cggtgccgct gcttcttttg ccggtccggc tggaaacgcg
     1861 atttagcgat gatggcactg cgctccgggt gcggatttat cccgacgatg tccatatcga
     1921 cgccctcgat cgcggcctca cggaagacga gcgcgccgcg ggtaaagctt attggactgc
     1981 ggtctggcga gcgaccgaag aagaggcggg aacggcctgg cgcacgctcg tgaccgcggc
     2041 gggcaagctg cgcgcgcaat gggtcgcgct cgctttgcgc ccaaccaatc tcgagcgtcg
     2101 catgaccgag cccgcgccgg aatttagcga aatctctccg cgcaaccggc acgccgcggt
     2161 cgcgcggctc ctcccggatg cattcaccgc ggtcgtcgtg cagggcgacg aacgccgtac
     2221 ccaaaccggc cacgcgattc tgccgcaggt caccgttggc atattcagca acgacggaac
     2281 ggagctgagt gaggtgcagg gaataaaagt tgtgaagggt gcggagtggc tggttgatta
     2341 cgaggaagcg gtccgcgtcg gcatggcggt gacggtgccg ctggcgcggc ctaacgagaa
     2401 ggtggatcgc cttttggttt acgggattcg ccacagcctc aatccaacga gcgcgccggc
     2461 tgagctggcc tcgcttttcg aggcgcatcg ctgcaccgat ggtctcgcct ttgttccgca
     2521 aggaacgccg accaacaaca ccgagagcga tcgcgccggc tggcaacgcc gcactgatcc
     2581 gcgtccgccg ccgcgcgatc ccggcgtcgc gcctaacgaa cacgccaaca gcgcagttct
     2641 cgccgccgcc ctcgggctcg acgcgcaggc gctggccgat ctcgattatt ccgacgcgcc
     2701 ggaacaagcg cgcgcgaccg cgatgaacat ttctctctgg aatccctcct ggggcggttt
     2761 tctcgacaaa gtgaatcgag tgacgaagga aggcgcgacg ctctcggatt ccgcgcgcga
     2821 agaaacgcga atctttcatc gcgattttgt ccggggtcgc ggtccgttgc cggccttgcg
     2881 catcgggagc cagccgtatg gaatcctgcc cgtctcgagc gtggagcgcc gctggaaaac
     2941 cgagcgcggc gattcgtttg aagccgcctt gctcctgatc ctcgagcggt tgcgcaggcg
     3001 ctggcggcaa tgcctcgaga aagtgccgcg catcggctcc ggaccgatcg acgacgccct
     3061 caaagagttg ctcgcttcca gtccggtctc attcgcgctc cgggtgcgtt cggttatttc
     3121 cagcgggttc gcgcagattg cgcctgagat caccgacgtc gatcccgacg atctcgcggt
     3181 tgagcggctg atcaacgaat tggttttcga ggaaatctct aacgctagcc tggagtatcc
     3241 gacgggttcg ttaggcgaga gccggccgct cgcgctcccg ctcgtggacg agagcgatcc
     3301 ggcagtgatc gacgcgatcc tcaacggcca atcgccggga gcgaaaagtg ttttgcaggc
     3361 gctgctcgag ctcgctctca atcgtgctca aaaggaagtc gagagcaacg gcgcggccgg
     3421 gcgaatcgcc gagatcgtga gccacgccag cactctcagc gccgccgatc gcgaacagac
     3481 tctcgcggtc gccagtcgcg ccgaaacggc cgcgccctcg atccttttcg ccgaagcaaa
     3541 acgggtcg
//
LOCUS       DATCWM010000384         2937 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_397011, whole genome shotgun sequence.
ACCESSION   DATCWM010000384 DATCWM010000000
VERSION     DATCWM010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2937)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2937)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2937
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_397011"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(238..1419)
                     /locus_tag="VIQ50_07350"
     CDS             complement(238..1419)
                     /locus_tag="VIQ50_07350"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HEY9360230.1"
                     /translation="MYKASAGVTLPTSIIGSLPRPAWYTAVLGRKSFLEAMANSRYRE
                     QYEDAVSCFLRAQEIAGLDILTDGDAHYDEEVGGLSWQSYPLTHMDGFAEVAQPMAYK
                     VGATAYPRGHILHDFLEARIFPRIVGPVGRGRLQYTAMWKTAQRMSKKPIKFGTILPE
                     LIAVSVEDDHYKDPVERTWAISNALNEELNELADAGCPVVQLEEPQIHMVPARGKTFG
                     KLDTADLVKIFNNTVKGLRGKTEVWCHTCWGNPSQQRIFAEVQSYQPTLEALNQVEAD
                     ALTFETRSSGTGDLKAIGEVIKDKKVVIGVIDHHTLQVERPDQVAALIREALKHIPPE
                     RLIISSDCGMGREGMGRRHAGYKMVSMVLGTNIVRKELGLPQAECLAADQRYTLTAAK
                     A"
     gene            complement(1435..>2937)
                     /locus_tag="VIQ50_07355"
     CDS             complement(1435..>2937)
                     /locus_tag="VIQ50_07355"
                     /EC_number="6.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003952 - NAD+ synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HEY9360231.1"
                     /translation="PALLIGTPWLEDGKLYNACCLLDRGAIAAVRMKVNLPNYGVFDE
                     RRLFAPGPPPGPVNFRGVRIGVPICEDIWTEWGDYEDVVECLTETGAELMIVPNGSPY
                     SRDKDELRLNIAVARVTESGVPLIYVNQIGGQDELVFDGASFALHADRTLAFQLPAFR
                     EIVKTVQWERAGNSWRCVDGPVVANEQGDKADYLACMLGLRDYVNKVGCKGVVLGLSG
                     GIDSSLVATLAVDALGPDRVYCVMLPYRYTSQQSLDDAAQVANALGVRYDVVPIESAV
                     VGLETALAPIFAGKPRDVTEENLQSRTRGTILMAISNKLGLIVVTTGNKSEMSVGYAT
                     LYGDMNGGFNPIKDLYKTEVYRLARLRNGWKPDGALGPDGPVISDSVLTRAPSAELRE
                     NQTDQDTLPPYDVLDQILARLVEHEEPIVKIAAEGFDRETVMKVERMLHLAEYKRRQA
                     APGVKVTLKNFGRDRRYPIVNRFRDSGAPLPKPDRALAKNTAAKSEAFDF"
BASE COUNT          491 a          965 c          922 g          559 t
ORIGIN      
        1 ggtcgccgcg acgaagcggc gccgcgtcat cgcttgccaa tgcgcgatcc gtgtcattcg
       61 atcctcattg cttcgcaaag cgaacgccgg tgaagactag catgcccctc gtgctcaggt
      121 cattccggtg cgacaaagcg cgtgtgggac tctgtcgcgg cgccgacgct cggcgagaca
      181 atgctcgcga cgctccgacg tcctctcgtg gccgaatcgt tcgcgcccca acgtggatta
      241 cgccttggct gcagtgagcg tgtagcgctg atccgcggcc aggcattccg cttgcggcag
      301 gcccagctcc ttgcgcacga tattggtgcc gagcaccatc gacaccatct tgtagccggc
      361 gtggcggcgg cccatgccct cgcgtcccat gccgcagtcc gatgaaatga tcagccgctc
      421 cggcggaata tgcttgagcg cctcgcggat gagcgcggcg acctggtccg gccgctcgac
      481 ctgcagcgtg tggtgatcga tgacaccgat caccaccttc ttgtccttga tcacctcgcc
      541 gatcgccttg agatcgccgg tgcctgagga acgcgtctcg aaagtcaacg cgtcggcctc
      601 cacctggttg agcgcctcga gcgtcggttg gtagctctgc acctcggcga agatccgctg
      661 ctgcgagggg ttgccccagc aggtatggca ccacacctcg gtcttgccgc gcagtccctt
      721 tacggtgttg ttgaagatct tcaccaggtc ggcggtgtcg agcttgccga atgtcttgcc
      781 gcgcgctggc accatgtgga tctgcggctc ctccagctgg acgacgggac agcccgcatc
      841 tgccaactcg ttgagctcct cgttgagcgc gttgctgatc gcccaggtgc gctcgacagg
      901 atccttgtag tggtcgtcct cgactgaaac agcgatcaat tcgggcagga tggtgccgaa
      961 cttgatcggc tttttgctca tccgctgcgc ggtcttccac atcgccgtgt actgcagccg
     1021 gccgcgcccc accggcccca cgatcctggg aaaaatgcgc gcctcgagga agtcgtgcag
     1081 gatatggccg cgcggataag cggtggcgcc gaccttgtac gccatcggtt gggccacctc
     1141 ggcaaaaccg tccatgtggg tgagcggata gctctgccaa ctcaggccgc cgacctcctc
     1201 gtcgtagtgc gcatcgccgt cggtgaggat atcgaggccg gcgatttctt gcgcccgcag
     1261 aaagcaggag accgcatcct cgtactgctc gcggtagcgc gaattggcca tcgcttcgag
     1321 gaagctcttg cgtcccagca ccgcggtata ccaagccggc cgcggcagcg agccgatgat
     1381 cgaggttggc agcgtgacac ccgctgaggc tttgtacatg gcgtgctctt ctcttcagaa
     1441 atcgaacgct tcgctcttcg ccgccgtatt cttcgccagc gcgcggtcgg gcttgggcag
     1501 cggcgcgccg gaatcgcgga agcggttgac gatgggatag cggcggtcgc gtccgaaatt
     1561 cttcagcgtc accttgaccc caggagctgc ttgccggcgc ttgtactcgg caagatgcag
     1621 catgcgctcg accttcatca ccgtctcccg atcgaagcct tccgccgcga tcttgacgat
     1681 gggctcctcg tgctcgacca gacgcgcgag gatttggtcg agcacgtcgt agggcggcag
     1741 tgtgtcctgg tcggtctggt tctcgcgcag ctcggcgctg ggcgcgcggg taagaacgct
     1801 gtcggaaatg accggaccgt ccggacccag cgcgccgtcg ggcttccagc cattgcgcag
     1861 ccgggccagc cgataaacct cggtcttgta aagatccttg atcggattga agcccccgtt
     1921 catgtcgccg tagagcgtgg cgtagccgac cgacatttcc gatttgttgc cggtggttac
     1981 cacgatgagc ccgagcttgt tggatatggc catcagaatg gtgccgcgcg tgcgcgattg
     2041 cagattctcc tcggtgacgt cgcgcggctt gccggcaaag atcggcgcga gcgctgtctc
     2101 caatcccacc accgcgcttt cgatcggcac cacgtcgtag cgaacgccaa gcgcgttcgc
     2161 gacctgcgcc gcatcgtcga gcgattgctg cgaggtgtag cgataaggca gcatcacgca
     2221 atacacccgg tccggcccga gcgcgtcgac cgccaacgtc gccaccaggg acgaatcgat
     2281 gccgcccgag agcccgagca ccacgccctt gcagccgacc ttgttgacgt aatcgcgcag
     2341 cccgagcatg caggcgagat agtccgcctt gtcgccctgt tcgttcgcaa ccacgggtcc
     2401 atcgacgcaa cgccagctat tgccggcccg ctcccattgc accgtcttga cgatttcgcg
     2461 aaacgccggg agctgaaagg cgagcgtgcg atccgcgtgc agggcaaacg aggcgccgtc
     2521 gaacacgagc tcgtcctgcc cgccgatctg gttgacatag atcagcggca cgccgctctc
     2581 cgtcacccgg gccaccgcga tgttgaggcg aagctcgtcc ttgtcacgcg aataagggga
     2641 accgttgggc acgatcatta gctcggcgcc ggtctcggtg aggcattcga ccacgtcttc
     2701 gtagtcgccc cattcggtcc agatgtcttc gcagatgggg acgccgatgc gcacgccgcg
     2761 gaagttgacg ggaccgggcg gcggaccggg cgcaaacaag cgtcgctcgt cgaacacgcc
     2821 gtagttgggc aggttcacct tcatgcgcac ggccgcgatg gcgccgcggt ccagcaggca
     2881 acaggcgttg tagagcttcc catcctccag ccagggcgtg ccgatcagca gcgccgg
//
LOCUS       DATCWM010000385         8261 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_24577, whole genome shotgun sequence.
ACCESSION   DATCWM010000385 DATCWM010000000
VERSION     DATCWM010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8261
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24577"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..234)
                     /locus_tag="VIQ50_07360"
     CDS             complement(<1..234)
                     /locus_tag="VIQ50_07360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360232.1"
                     /translation="MALTFAVLLPFDVAAASCRGYQHAVRAAIKKQVRVLRALEHEAT
                     DRLKGLDTRPFDYLLGQARAAAGVIGDKDALAAE"
     gene            complement(338..1357)
                     /gene="glpX"
                     /locus_tag="VIQ50_07365"
     CDS             complement(338..1357)
                     /gene="glpX"
                     /locus_tag="VIQ50_07365"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HEY9360233.1"
                     /translation="MKKEGPGVVPSITIQPDLALERVLTLEIVRVTERAAVAAARWTG
                     RGNEKGADQAAVDAMRRELNKLPINGTIVIGEGERDEAPMLFIGETVGNKRGPEVDIA
                     VDPLEGTTLCAKNMPGAIATMAMAEAGTLLNAPDVYMEKIAVGPGYPVGVVDLDAPAE
                     DNIRALAKAKGVEPAEITALILDRPRHADLIAGVRKAGAAVRLITDGDVAGVIHTADA
                     ANTGVDIYIGIGGAPEGVLAAAALRCIGGQMQCRLVLDTEEKRERAAKMGIRDPRKKY
                     GISDLVKGDCLFAATGVTNGALLEGVRVRKDVIETETVVMRSVTGTVRWISAEHRQLE
                     KFHLD"
     gene            complement(1426..2751)
                     /locus_tag="VIQ50_07370"
     CDS             complement(1426..2751)
                     /locus_tag="VIQ50_07370"
                     /EC_number="1.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004412 - homoserine dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HEY9360234.1"
                     /translation="MSAPLKLGIAGLGTVGSCVARLIERERDALAARCGRAIEVVAVS
                     ARSRSKKRDIGRRKLRWVADPVTLATDSEIDVFVELMGGEGDPARAAISAALAAKKSV
                     VTANKALLARHGVTLATIAEKNRVALNFEAAVGGAIPIVKTLREGLAGNSLARIYGIL
                     NGTCNYILTRMEEEKLAFAACLKEAQRLGYAEADPTFDIEGHDTAQKLAILASLAFGT
                     KVDQSAVYVEGISSITPEDLEWADELGYRVKLLGVAVKTEKGIEQRVHPTMVPKETPI
                     AQVMGVTNAVTVDVDAIAPITLVGPGAGGLATASAVVSDIGDIARGVRTAPFGRPSAR
                     LATSKKAPMQRHEGGYYIRLLAVDKPGTAAAIARRLAQQNISLESIVQRRRGEPPHGG
                     EIAGSSGAPVPVILITYATTEDAVRRALAAVGRDKVILGKPQVIRIEKN"
     gene            complement(2779..3996)
                     /locus_tag="VIQ50_07375"
     CDS             complement(2779..3996)
                     /locus_tag="VIQ50_07375"
                     /EC_number="2.6.1.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016842955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LL-diaminopimelate aminotransferase"
                     /protein_id="HEY9360235.1"
                     /translation="MEEFYRVRRLPPYVFEQVNRAKAAARNAGADIIDLGMGNPDLPT
                     PAHVIDKLKETIGKPRTDRYSSSRGIPGLRRAQAAYYARRFGVKLNPETEIVTTLGSK
                     EGFANVAQAITAPGDVVVVPNPSYPIHAFGFLMAGGAIRAVPSEPTPSFFEALERAII
                     RSIPKPIAVVVCYPSNPTAAVADLDFYKDLVLFARKHGIFVLSDLAYAEVYFDNHPPP
                     SVLQVPGAIEVAVEFTSMSKTFSMPGWRIGFAVGNERIIAALARVKSYLDYGAFTPVQ
                     VAATAALNGPEHCIREMRETYKRRRDVLVESFARAGWEIPPPRASMFAWAPIPEPFQT
                     LGSVEFSTLLVEKAEVAVSPGSGFGEYGEGYVRIALVENEQRIRQAARNIRRFLETGP
                     KKLHNVVPLAQRR"
     gene            complement(4058..4354)
                     /locus_tag="VIQ50_07380"
     CDS             complement(4058..4354)
                     /locus_tag="VIQ50_07380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360236.1"
                     /translation="MSRRALAAALIAGGGLLGGCSGGSTIADHLPTALGGLPDATPQR
                     PTTASAYPAVHDMPPQRPTTVLSDAEQTKLENDLAAARTRATEAAKAAAAADKP"
     gene            4728..6455
                     /gene="phaC"
                     /locus_tag="VIQ50_07385"
     CDS             4728..6455
                     /gene="phaC"
                     /locus_tag="VIQ50_07385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0042619 - poly-hydroxybutyrate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I poly(R)-hydroxyalkanoic acid synthase"
                     /protein_id="HEY9360237.1"
                     /translation="MMEEGGKALAAYLKPREEGRRDDQYAEITDVVKTIGQVADYWLR
                     DPQRALELQSSLGKAYLDLWANAVKRMAGEQVQPVAAPDPKDKRFADPEWSSNQFFDF
                     LKQAYLLTVQWANRLVRDAEALDPHTRQKAEFYIRQIANAIAPSNFVLTNPELLRETV
                     ASKAGNLVRGMHMLAEDIAAGRGDLKIRQSRSEMFEVGRNLALTPGKVIFENELMQLI
                     QYTPSTPTVLKRPLLIVPPWINKFYILDLTPEKSLIKWCVDQGLTVFVISWVNPDAKL
                     AEKSFEDYMRGGPLAALDVIEKATGERQVNAAGYCVGGTLLAVTLAYMASKRDERIAS
                     ATLFAAQVDFTHAGDLKVFVDEEQIAAREREMSERGYLEGRKMATAFNLLRSNDLIWP
                     YVINNYLKGKEPAPFDLLYWNSDATRMPAANHSFYLRNCYLENRLSKDEMVIGGNKLK
                     LKSVTVPIYNLATREDHIAPARSVLLGTKSFGGPVRFVLAGSGHIAGVVNPPDKMKYQ
                     YWTGPKSTSANLDKWLAKAKEHAGSWWPHWLDWIREQDSTEVAAREPGGGKLAPLEDA
                     PGSYVKVRD"
     gene            6529..7422
                     /locus_tag="VIQ50_07390"
     CDS             6529..7422
                     /locus_tag="VIQ50_07390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEY9360238.1"
                     /translation="MLLSVVVVAAFTAGPALAQELTGTLKKIKDTGAITLGHRDSSVP
                     FSYYDDKQQVVGYAMDLCARIVEGVKNELKLAKLETKLNPVTSATRIPLMANGTVDLE
                     CGSTTNNLERQKQVSFTITHFVTANRFVSKKSANLKTVDDLKGKTIASTSGTTNIKQI
                     TEIGAQKGLNLNILAAKDHAEAFLMVETGRAAAFVMDDILLYSLVAGSKSPQDYVISA
                     DALSVEPYGIMLRREDAPFKKVVDETMIATYRGGAINAIYDKWFLKPIPPRGINLNVP
                     MSDAFKKVIASPTDSGDPAVY"
     gene            7510..8259
                     /locus_tag="VIQ50_07395"
     CDS             7510..8259
                     /locus_tag="VIQ50_07395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEY9360239.1"
                     /translation="MNYNWNWGIFFQTSPDGVHTYLETLLLGTGWTLATALSAWCLAL
                     AMGSLVGVIRTTPKPWLVRLGNAYVELFRNIPLLVQMFLWYFVLPEVLPTRMGDWLKQ
                     LPDASFYTAVVALGFYTSARVAEQVRAGILSLARGQGWAALALGLTPTQAYLYVLLPM
                     AYRIILPPLTSEFLNIIKNSAVALTIGLMELTARARAMQEFSFQVFEAFTAATVIYIV
                     INMMVTFGMRWIERRASVPGFIGAAPAASMH"
BASE COUNT         1505 a         2675 c         2595 g         1486 t
ORIGIN      
        1 ttcggccgcc agtgcatctt tgtcgccgat cactccggct gcggcgcgcg cctgaccgag
       61 gagatagtcg aacggccgag tgtcgagccc cttcaggcga tccgtcgcct catgctcgag
      121 cgcccgcagc acccggacct gtttcttaat cgcggcgcga acggcgtgct ggtagccccg
      181 gcacgatgcc gcggcaacgt cgaatggcag cagaaccgca aatgtcagcg ccacgccggc
      241 gaatgctggg gcgattctgc gccgtggccg atcagtcgaa cgagcactcc ggacggcaat
      301 catgacgcta ggagccaagg ccgcctgatg cgttgcctca atccaagtga aatttctcga
      361 gttggcgatg ctcggcgctg atccagcgaa ccgtgccggt gaccgagcgc atcactacag
      421 tttctgtttc gatgacgtcc ttgcggacgc gcacaccctc gagcagcgcc ccgttggtaa
      481 ctccggtggc ggcgaacagg caatcgccct tcaccaggtc gctgatcccg tacttcttgc
      541 gcggatccct gatgcccatc ttcgcggcgc gctcgcgctt ttcctcggtg tcgagcacga
      601 gccggcactg catttgtccg ccgatacaac gcagcgccgc cgccgccaat acgccttcgg
      661 gcgccccgcc gataccaata tagatgtcga cgccagtgtt ggcagcatcg gcggtatgga
      721 tcacgccggc aacgtcgccg tcggtgatga gccggaccgc ggcgcccgcc ttacgaacgc
      781 cggcgatgag atcggcatgg cgcgggcggt cgaggatgag cgcagtgatc tcggccggct
      841 caacgccctt ggctttggcc agggcgcgga tgttgtcctc ggccggcgca tcgagatcga
      901 cgacgcccac tggatacccg gggccgacgg cgatcttctc catgtagacg tcgggcgcat
      961 tgagcagcgt gcccgcttcc gccatggcca tggtggcgat cgcgcccggc atgttcttgg
     1021 cacatagcgt ggtgccctcg agcggatcga ccgcgatgtc gacctcgggc ccgcgcttgt
     1081 tgccgacggt ctcgccaatg aacagcatcg gcgcctcgtc gcgctcgccc tctccgatca
     1141 cgatggtgcc gttgatggga agcttgttga gctcgcggcg catggcgtcg accgccgcct
     1201 gatcggcgcc cttctcgttg ccgcgaccgg tccagcgcgc cgccgccacc gccgcgcgtt
     1261 cggtcacccg gacgatctcc agcgtgagaa cgcgttccaa tgccaggtca ggctggatag
     1321 tgatcgacgg cacgactccg ggtccctctt tcttcatgcc ttcccctcgc gcctgtcttg
     1381 ccgttgtcat gtcacgcctt ttccaaccga gtacgaccca tcctatcagt ttttctcgat
     1441 ccggatgacc tgtggtttac ccaagatcac cttatcgcgc ccgactgccg cgagcgccct
     1501 gcgcacggcg tcctcggtgg tcgcgtaggt gatcagaatc accggcactg gcgctcccga
     1561 gctgccggcg atctcaccgc cgtgcggcgg ctcgccgcgg cggcgctgca cgatcgattc
     1621 gagcgagatg ttctgctgcg ccagccgcct ggcaatcgcc gcggcggtgc ccggcttgtc
     1681 cacggcgaga agccggatgt agtagccgcc ttcgtggcgc tgcatcggcg cctttttgct
     1741 cgtggccagc cgcgctgaag gccgcccgaa tggcgccgtg cgcaccccgc gggcgatgtc
     1801 gccgatgtcc gacaccaccg ccgaggccgt cgccagcccg ccggcgccgg ggccgaccag
     1861 cgtaatcggc gcgatggcgt cgacatcgac ggtgaccgca ttggtcacgc ccatcacctg
     1921 cgcgatcggg gtttccttcg gcaccatggt cggatgaacg cgctgctcga tgcccttttc
     1981 agtcttcacc gcgacgccga ggagcttcac gcgatagcca agctcgtcgg cccactcaag
     2041 gtcttcgggc gtgatggagg aaatgccttc gacgtagacc gcactttgat cgaccttggt
     2101 cccgaaggcg aggctcgcca ggatcgcgag cttctgcgcc gtgtcgtggc cctcgatgtc
     2161 gaaggtggga tcggcctcgg cgtaacccag ccgctgtgcc tccttcaggc aggcggcgaa
     2221 ggcgagcttc tcctcttcca tgcgcgtcaa gatgtagttg caagtaccgt tgagaattcc
     2281 ataaatgcgc gcgagcgaat tgccggccaa tccctcgcgc agcgtcttga cgatcgggat
     2341 ggcgccgccg accgcagcct cgaagttgag cgccacgcgg ttcttctcgg caatggtcgc
     2401 cagcgtgacg ccgtgcctgg cgagcagcgc tttattggca gtgacgacgg attttttggc
     2461 tgcgagcgcc gccgagatcg ccgctctcgc aggatcgccc tctccgccca tcaattccac
     2521 gaacacgtcg atctcgctat cggtcgcgag cgtcacggga tcggcgaccc agcgcagctt
     2581 cctgcgcccg atatcgcgct tcttgctgcg cgagcgcgcg ctgaccgcca cgacttcgat
     2641 cgcgcggccg caacgcgccg cgagcgcatc gcgctcgcgc tcgatcagtc gggcgacgca
     2701 cgacccgacc gtgcccaaac cggcaatgcc aagtttcaat ggggcggaca tcgtcggcct
     2761 gtgtggaagc ggagcctgct agcgccgctg ggccaggggg acgacgttgt gcaacttttt
     2821 gggaccggtt tcaagaaagc ggcggatgtt gcgcgcggcc tggcggatgc gctgctcgtt
     2881 ctcgaccagt gcgatccgca cgtatccctc gccatattcg ccgaacccgc tgcctggcga
     2941 gaccgcgacc tcggcctttt cgaccaggag cgtggagaac tcgacgctgc cgagggtctg
     3001 gaacggctcg ggtatcggcg cccaagcgaa catggaggcg cgcggaggag gaatctccca
     3061 gcccgcgcga gcgaacgatt ccaccagcac gtcgcgccgg cgtttgtagg tctcgcgcat
     3121 ctcgcggatg cagtgctcgg ggccgttgag cgcggcggtt gctgccactt ggaccggggt
     3181 aaaggcgcca taatcgagat aggacttcac ccgcgccagc gccgcgatga tccgctcatt
     3241 ccccaccgcg aagccgatgc gccagcccgg catcgaaaag gtcttcgaca tcgacgtgaa
     3301 ttcgaccgca acttcgatcg cgcccggcac ctgcagcacc gagggcggcg gatgattgtc
     3361 gaaatagact tccgcgtagg caaggtccga gagcacgaag atgccgtgct tcctcgcgaa
     3421 taggaccaga tccttgtaga agtcgagatc ggcgacggcg gcggtgggat tggagggata
     3481 gcagaccacg accgcaatgg gtttgggaat ggagcggatg atcgcgcgct cgagcgcctc
     3541 gaagaaagaa ggcgtcggct cggacggcac ggcgcgaatg gcgccgccag ccatgagaaa
     3601 accgaaagca tgaatcggat agctgggatt gggcacgacg acgacatcgc ccggcgcggt
     3661 aatcgcctgc gccacgttgg cgaagccttc cttcgacccc agcgtggtga cgatctccgt
     3721 ctcgggattg agttttacgc cgaagcggcg cgcgtaatag gccgcctgcg cgcggcgcag
     3781 tcccgggatg ccgcgcgagg aagaataccg gtcggtgcgc ggcttgccga tcgtttcctt
     3841 gagcttgtcg atgacgtgcg cgggcgtcgg caggtcggga ttgcccatgc cgagatcgat
     3901 gatatcggcg ccggcattgc gcgccgccgc tttggcgcgg ttgacctgct caaagacata
     3961 gggcggtagg cgccgaacgc ggtaaaattc ttccatggcc ccggctcctt cggcctgcgc
     4021 ggtcatgctg tgcgagcagg caggcgcgag ccttctatca cggcttgtcg gcggcggcag
     4081 cggccttggc ggcttccgtg gcacgggtgc gggccgcggc caaatcgttt tcgagctttg
     4141 tctgctccgc gtcgctgagc accgtcgtcg gacgctgcgg cggcatgtcg tgaaccgcag
     4201 gataggccga ggccgtcgtc gggcgttgcg gcgtggcgtc gggcaggccg ccgagcgcgg
     4261 tcggcagatg atcggcaatc gtgctgccgc ccgagcagcc acccagaagc ccgccgccgg
     4321 caatgagcgc cgcagcgagg gcgcgcctcg acaagggcca ttgtaagcgc acgagggaca
     4381 tcatgccgtt cattgcggcc ggattacagc gccccacacc gaccggcctc cccctcccaa
     4441 gcgaaattgc tgccaattca aagaattgcg cggaagctct agcctcgcaa tatgaccaaa
     4501 gcaaggttac ggcatgcggc ctcgcgcgtg cggcgcttgc gcgcaagcgg cgctgcgaag
     4561 ccggctgcgc cttgcggcgg ttatggggta aactccatct gagccccgga aaggcgccat
     4621 tcggccggcg ccgaaccgtg aattgaggcg ataccgtgag agccccatcc gaaccgatca
     4681 aaagcggctc cgccgacgtg gaggagttcg cccacaacat cgcccgcatg atggaggagg
     4741 gcggcaaggc gttggccgcc tatctcaagc cgcgcgaaga aggccgccgc gacgatcaat
     4801 acgccgagat caccgacgtg gtgaaaacca tcggccaagt cgcggattac tggcttcgcg
     4861 atccgcagcg cgcgctcgaa ttgcaatcga gcctgggcaa agcctatctc gacctgtggg
     4921 ccaatgcggt caagcgcatg gctggcgagc aagtgcaacc ggtcgccgcg cccgatccga
     4981 aagacaagcg cttcgccgat cccgagtggt cgagcaacca gttcttcgat ttcctcaagc
     5041 aagcctatct gctgaccgtg caatgggcga accggttggt gcgcgacgcc gaagcgcttg
     5101 atccgcatac ccgacagaag gcggagttct acatacgcca gatcgccaat gcgatcgcgc
     5161 cgtccaattt cgtgctcacc aacccggagc tcttgcgcga gacggtcgcc tccaaagcgg
     5221 gcaatctcgt gcgtggcatg cacatgctgg ccgaggacat cgccgccgga cggggcgacc
     5281 tgaaaattcg gcaatccagg tcggaaatgt tcgaggtcgg ccgcaacctg gcgctcacgc
     5341 ccggcaaggt catcttcgaa aacgagctga tgcagctcat ccagtacacg ccgtcgacgc
     5401 caaccgtgct caagcgaccg ctgctgatcg tgccgccctg gatcaacaag ttctacatcc
     5461 tcgatctgac gccggaaaaa tccctcatca aatggtgcgt ggatcagggc ctcacggtat
     5521 tcgtcatttc ctgggtgaac cccgacgcga aactcgcgga gaaaagcttc gaagattaca
     5581 tgcgcggggg cccgcttgcc gcgctcgacg tcatcgagaa agccactggc gagcgccagg
     5641 tcaacgcggc cggttattgc gtcggcggga cgcttttggc tgtgacgctg gcctatatgg
     5701 caagcaagcg cgacgagcgc attgcctcgg ccacgctttt cgccgcgcaa gtcgatttca
     5761 cccacgccgg cgatctcaag gtgttcgtcg acgaggagca gatcgcggca cgcgagcggg
     5821 agatgagcga gcgcggctat ctcgaaggca ggaaaatggc gacggccttc aacctgttgc
     5881 gctcgaacga tctgatctgg ccgtacgtca tcaacaacta cctcaaaggc aaggagccgg
     5941 cgccattcga tctcttgtac tggaactccg atgcgacgcg aatgccagcg gcgaaccact
     6001 cgttttatct gcgcaattgc tacctggaga accggctgag caaggacgag atggtcattg
     6061 gcggcaacaa gcttaagctc aaaagcgtga ccgtcccaat ctacaatctg gccacgcgcg
     6121 aggatcacat cgcgcccgcg cggtcggtgt tgcttggcac gaaatccttc ggcggaccgg
     6181 tgcgtttcgt gctcgccggc tcgggacaca tcgccggcgt tgtcaatccc cccgacaaga
     6241 tgaagtatca gtattggacc ggacccaaat cgaccagcgc caacctcgac aaatggctgg
     6301 caaaggccaa ggagcacgcg ggatcctggt ggccgcattg gctcgattgg atcagggagc
     6361 aggattcgac cgaggtggcg gcccgcgagc ccggcggcgg aaagcttgcg ccgctggagg
     6421 acgcacccgg aagctatgtt aaagtcaggg attgacggct ggacgcctgc gtgcggacgg
     6481 acggacgggt aagccagttc agaggagaga acttcaatgc gtctgaaaat gctgctttcg
     6541 gtggttgtcg tcgcggcttt caccgccggc ccggcgctcg cacaggagct caccggcacg
     6601 ctcaagaaga tcaaggacac cggggccatc acgctaggtc accgcgactc ctcggtgccg
     6661 ttttcctatt acgacgacaa gcagcaggtc gtgggctacg ccatggacct ctgcgcccgc
     6721 atcgtcgaag gggtgaagaa cgagctcaag ctcgccaagc tcgaaaccaa actcaacccg
     6781 gtcacctcgg ccacgcgtat cccactgatg gccaacggta ccgtcgacct cgaatgcggc
     6841 tcgaccacca acaatctgga gcggcagaag caggtttcat tcaccatcac ccatttcgtc
     6901 accgcgaacc gcttcgtttc taagaagtcg gcgaacctga aaacggtcga cgacctcaag
     6961 ggcaagacca tcgcatcgac ctcgggcacg accaatatca agcaaatcac cgagattggc
     7021 gcgcagaagg gcctgaacct taacatcctc gccgccaagg atcatgccga ggcgttcctg
     7081 atggtcgaga ccggccgcgc cgccgctttc gtcatggacg atattctgct ctacagcctg
     7141 gtcgccggat cgaagtcgcc acaggactat gtgatctccg ccgacgcact gtcggtcgaa
     7201 ccttatggca tcatgctccg gcgcgaggat gccccgttca agaaggtcgt ggatgagacc
     7261 atgatcgcca cctatcgcgg cggtgcaatc aacgcgatct acgacaagtg gttcctaaag
     7321 ccgatcccgc caaggggaat caatctcaat gtgccgatga gcgatgcctt caagaaggtg
     7381 atcgccagcc cgaccgacag cggcgatccg gccgtgtatt gatccgctaa ccggatacca
     7441 gagctcagcg atcaggacca cgcgttcctg atcgctgcta tctgatggtt atgggagtaa
     7501 gggggccgcg tgaactacaa ctggaactgg ggcatctttt tccagacgtc gcccgacggc
     7561 gttcatactt atctcgagac gctcctcctc ggcaccggct ggacgctcgc gaccgcgctc
     7621 agcgcgtggt gcctggcgct cgccatggga tcgctcgtcg gcgtcattcg caccaccccg
     7681 aagccctggc tggtcagact cggcaacgct tatgtggaat tgttccgcaa catcccgctg
     7741 ctggtgcaga tgtttctttg gtacttcgtg ttgcccgagg ttctgccgac gcgcatgggt
     7801 gattggctca agcagcttcc cgacgcctcg ttctacactg ccgtggtcgc actcggcttc
     7861 tacacgtcgg cgcgggttgc cgaacaggtg cgggcgggca tcttgagtct cgctcgcggc
     7921 cagggctggg ccgcgctcgc gctgggcttg accccgacgc aggcctacct ctacgtgctg
     7981 ctgccgatgg cgtatcggat catcctgccg ccgctgacgt ccgaatttct caacatcatc
     8041 aagaacagcg ccgtcgcgct cacaataggg ttgatggagc tcacggcgcg cgcgcgtgcc
     8101 atgcaggagt tctcgttcca agtgttcgag gcatttaccg ccgcgaccgt catctacatc
     8161 gtgatcaaca tgatggtgac gttcggcatg cgctggatcg agcgccgggc gtcggtgccc
     8221 ggtttcatcg gcgcggcgcc tgcggcctcg atgcactgag c
//
LOCUS       DATCWM010000386         8869 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_186542, whole genome shotgun sequence.
ACCESSION   DATCWM010000386 DATCWM010000000
VERSION     DATCWM010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8869
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186542"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..219
                     /locus_tag="VIQ50_07400"
     CDS             <1..219
                     /locus_tag="VIQ50_07400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360240.1"
                     /translation="AVATAAPVDAQTLEGRAAALQKQHGFRFPLPDMLRRRMDKPQSQ
                     AAGGNVITDDFAPADAYDVMGRDLRRKK"
     gene            complement(244..1092)
                     /locus_tag="VIQ50_07405"
     CDS             complement(244..1092)
                     /locus_tag="VIQ50_07405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008136313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEY9360241.1"
                     /translation="MNRGVVFGCLAVLASATAATAQTSLERGRYLVDTVMTCQNCHTP
                     KGPNGPQFDKALSGGLRFDEPAFDVTASNITPDRDTGIGSWSDPEIRVALQEGTRPAG
                     HHLAPIMPSGFYKILIPGDLDGIVAYLRSVPPVENKVPGPVYKLAVSQQVFPGAEKPM
                     SASDLGDKSKRGFYLATIAHCMECHTPFAPSGAGVDFQNSLGKGGREFPGPWGVSTAR
                     NITSSKSAGIGDWSDAEIKRAITQGVRKDGSRLKPPMGYPFYAKMTDGDLDAIVAYVR
                     TVPAKE"
     gene            complement(1181..1615)
                     /gene="rplQ"
                     /locus_tag="VIQ50_07410"
     CDS             complement(1181..1615)
                     /gene="rplQ"
                     /locus_tag="VIQ50_07410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005762 - mitochondrial large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEY9360242.1"
                     /translation="MRHGIAHRKLNRTHEHRRAMFANMAAALIKHEQIVTTLPKAKDL
                     RPIVEKLVTLAKRGDLYARRQAIAQMRDIGMVKKLFEVLGPRYKDRDGGYTRVLKAGF
                     RYGDSAPVAVIEFVDRDVEAKGQDSGPVQEKAEPEAEAPAPA"
     gene            complement(1697..2728)
                     /locus_tag="VIQ50_07415"
     CDS             complement(1697..2728)
                     /locus_tag="VIQ50_07415"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HEY9360243.1"
                     /translation="MGANVTIQKNWQELIRPNKLQVTPGGDPKREAIVIAEPLERGFG
                     VTLGNALRRILLSSLQGAAVQSVHIDGVLHEFSSIPGVREDVTDIVLNIKDIAIKMQG
                     DGPKRMVVKKQGPGAVTAGDIQTVGDTVVLNPDLVLCTLDEGAEIRMEFTVNTGKGYV
                     PTERNRPEDAPIGLIPVDSLYSPVRKVSYKVENTREGQILDYDKLTMQIETNGAVTPD
                     DAVAYAARILQDQLNVFVNFEEPRKEVIAEAIPDLAFNPAFLKKVDELELSVRSANCL
                     KNDNIVYIGDLVQKTEAEMLRTPNFGRKSLNEIKEVLAQMGLHLGMEVPGWPPDNIDE
                     LAKRFEDHY"
     gene            complement(2833..3222)
                     /gene="rpsK"
                     /locus_tag="VIQ50_07420"
     CDS             complement(2833..3222)
                     /gene="rpsK"
                     /locus_tag="VIQ50_07420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007603045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HEY9360244.1"
                     /translation="MGKEATRVRRRERKNIASGVAHVNATFNNTMITITDAQGNTIAW
                     SSSGTMGFKGSRKSTPYAAQVAAEDAAKKAQEHGMRTLEVEVAGPGSGRESALRSLQS
                     AGFTITSIRDVTPIPHNGCRPRKRRRV"
     gene            complement(3333..3701)
                     /gene="rpsM"
                     /locus_tag="VIQ50_07425"
     CDS             complement(3333..3701)
                     /gene="rpsM"
                     /locus_tag="VIQ50_07425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008963796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HEY9360245.1"
                     /translation="MARIAGVNIPTNKRVIIALQYIHGIGQKKANEIMEKVGIPDARR
                     VSQLTDQEVLQIREVIDRDYMVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQR
                     THTNARTRKGPAKPIAGKKK"
     gene            complement(3849..4619)
                     /locus_tag="VIQ50_07430"
     CDS             complement(3849..4619)
                     /locus_tag="VIQ50_07430"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018647257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0019205 - nucleobase-containing compound
                     kinase activity [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HEY9360246.1"
                     /translation="MRLVLLGPPGAGKGTQAQRLVAKHGLVQLSTGEMLRAAVEAGTA
                     IGLHAKELMARGELVPDDVVVAIVSERIDQPDARNGFILDGFPRTVPQAHALDRILKE
                     KGLTLDAVIELKVDEGVLLKRIKKRIAEMKARREALREDDDPEVLRRRLLAYRDQTAP
                     LAAYYQLQSVLRSVDGMAAISEVSSAIDRALRQAANNKPRAKASLVADQKSKVPAAKL
                     AKSMKGKAKTAKESRSARAPRKSARRKSNPGRRLTKRR"
     gene            complement(4616..5947)
                     /gene="secY"
                     /locus_tag="VIQ50_07435"
     CDS             complement(4616..5947)
                     /gene="secY"
                     /locus_tag="VIQ50_07435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HEY9360247.1"
                     /translation="MVSAAEQLAANLNFSALAKAEELKKRIWFTLGALLVYRFGTYIP
                     LPGIDPSAWDQIFRSQAGGILGMFNMFSGGGIHRMAIFALNIMPYISASIIIQLMTTV
                     SPTLEQLKKEGEQGRKVMNQYTRYLTVLLAAFQSYGIAVGLEGAGNVVTDPGWFFRIG
                     TVITLTGGTMFLMWLGEQITSRGIGNGISLIILSGIVAELPSAIAGTLELGRQGALST
                     GLILVVLVMVVAVIAFIVFMERAQRRLLIQYPKRQVGNRMFEGQSSHLPLKLNTSGVI
                     PPIFASSLLLLPTTVANFNAGQGPDWFVAITTQLGHGRPLFLVLYIALIVFFAFFYTA
                     IVFNPTETAENLKKHGGFIPGIRPGERTAEYIDYVLSRITVIGAGYLALVCLLPEILI
                     SYAAVPFYFGGTSLLIVVSVTMDTVAQIQGYLLAHQYEGLIKRSKLRGRRR"
     gene            complement(6017..6508)
                     /gene="rplO"
                     /locus_tag="VIQ50_07440"
     CDS             complement(6017..6508)
                     /gene="rplO"
                     /locus_tag="VIQ50_07440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HEY9360248.1"
                     /translation="MKLHQLADRPGARKKRLRIGRGIGSGMGKTGGRGGKGQAARSGV
                     RIKGFEGGQMPLHRRLPKRGFRNTSFARRLNEVNLGKIQAAIDAGKLDAGATVDAAAL
                     VKAGVLRRAKDGVRLLGSGEIKTSVAFSVWGASKSATQAVEKAGGSVTLLAPSRETGE
                     QTA"
     gene            complement(6505..6711)
                     /gene="rpmD"
                     /locus_tag="VIQ50_07445"
     CDS             complement(6505..6711)
                     /gene="rpmD"
                     /locus_tag="VIQ50_07445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HEY9360249.1"
                     /translation="MNTTAKVLKIEQIGSAIRRHHTQRETLIGLGLNRIGRVVELPDT
                     PQTRGMIAKVRHLIRVVEAEGEQR"
     gene            complement(6737..7300)
                     /gene="rpsE"
                     /locus_tag="VIQ50_07450"
     CDS             complement(6737..7300)
                     /gene="rpsE"
                     /locus_tag="VIQ50_07450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013420570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HEY9360250.1"
                     /translation="MAREPRDRRDREERESEFTDKLVHINRVAKVVKGGRRFGFAALV
                     VVGDEKGRVGFGHGKAREVPEAIRKATDAAKRGLIRVPLREGRTLHHDVAGRHGAGRV
                     FLRAAPPGTGIIAGGPMRAVFETLGMQDVVAKSLGSSNPYNMVRATFDALKRQDSPRS
                     VAARRNIKVSTLQARRRDLGEGEQAAD"
     gene            complement(7396..7758)
                     /gene="rplR"
                     /locus_tag="VIQ50_07455"
     CDS             complement(7396..7758)
                     /gene="rplR"
                     /locus_tag="VIQ50_07455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009469219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HEY9360251.1"
                     /translation="MASVTDRTLRRTAKVRRNVRRAGGRRARLSVFRSSKHIYAQVID
                     DADGQTVVSASSLEKDMRGNLKTGANIEAAKAVGKRLAERAAAKGIKEVVFDRGGYLY
                     HGRVKALADAAREGGLDF"
     gene            complement(7771..8304)
                     /gene="rplF"
                     /locus_tag="VIQ50_07460"
     CDS             complement(7771..8304)
                     /gene="rplF"
                     /locus_tag="VIQ50_07460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004685699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HEY9360252.1"
                     /translation="MSRVGKKPVAIPSGVTASVEGQVVKVKGPKGALAVALHGDVAAK
                     VEGSEVKIDPRADTKRARAMWGTYRSLLANAMTGVTKGFERRLEITGVGYRAAVQGKN
                     LQVQLGYSHDIVYPIPEGITIAVPKATEVVVTGIDQQKVGHVAAEIRAFRKPEPYKGK
                     GVKYAGEYIFRKEGKKK"
     gene            complement(8398..8796)
                     /gene="rpsH"
                     /locus_tag="VIQ50_07465"
     CDS             complement(8398..8796)
                     /gene="rpsH"
                     /locus_tag="VIQ50_07465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HEY9360253.1"
                     /translation="MGMNDPLGDMIARIYNAQMRNKSKVSTPASRLRVSVLDVLKTEG
                     FIRGYAAVEHSNGRKELEIELKYSDGEPVIREISRVSKPGRRVYASVKALPRVNNGLG
                     VAILSTPKGVMADHDARDNNVGGEILCTVF"
BASE COUNT         1445 a         2878 c         2793 g         1753 t
ORIGIN      
        1 gccgtcgcca cggctgcgcc ggtcgatgcg caaactttgg aaggcagggc ggcggcgctg
       61 cagaagcagc acggcttccg ttttcctttg ccggatatgt tgcggcggcg gatggacaag
      121 ccgcagtcgc aagccgcggg cggcaatgtc atcaccgacg atttcgcgcc cgccgacgcc
      181 tacgacgtga tgggcaggga tctgcgccga aagaagtagc gcatcaatcg gcggatcggc
      241 cggtcactcc ttcgccggca cggtgcgtac ataggcgacg atggcatcga gatcgccgtc
      301 ggtcatcttg gcgtaaaagg ggtaacccat cggcggcttg agcctgctgc cgtccttgcg
      361 cacgccttgc gtgatggcgc gcttgatctc ggcgtcgctc caatcgccga tgcccgcgct
      421 cttgctcgag gtgatgttgc gcgcggtcga aacgccccac ggtccgggga actcgcggcc
      481 gcctttgccc agcgagtttt gaaaatcgac gcccgctccg gagggcgcga acggcgtgtg
      541 gcactccatg caatgggcga tggtggcgag gtagaagccg cgtttgctct tgtcgccgag
      601 gtcggaggcg gacatcggct tctcggcgcc cgggaacacc tgctgagaaa ccgcaagctt
      661 ataaaccggg ccaggcacct tgttctcaac tggcggcacc gagcgcaggt aagcgacgat
      721 gccgtcgagg tcgccgggga tgaggatttt gtagaagccg ctcggcatga tcggggcaag
      781 gtggtgaccc gcgggacgtg tgccctcctg caacgcaacc ctgatctcgg ggtcgctcca
      841 actgccgatg ccggtgtcgc gatcgggcgt gatgttggat gcggtgacgt cgaaagcagg
      901 ctcgtcgaaa cgcagtccgc cggacagagc cttgtcgaac tgcggaccgt tcggtccctt
      961 cggggtatgg cagttttggc aggtcatgac ggtgtccacg agatagcgcc cgcgctcgag
     1021 cgatgtctgc gccgttgccg ccgtcgccga cgcaagcacc gcgaggcacc cgaaaaccac
     1081 gccacgattc atgcgtatcc cctgccccat tcacggtttc tcgcagcaaa aaagggcagc
     1141 gctcaggcgc tgccctcatg atgcttggcc ttttctccga tcaggccggc gccggcgctt
     1201 cggcctccgg ctccgccttc tcttgcaccg gcccggagtc ctgccccttc gcctcgacgt
     1261 cgcgatcgac aaactcgatc accgcgacgg gcgcggaatc gccgtagcgg aaacccgcct
     1321 tgagcactcg ggtatagccg ccgtcgcgat ccttgtagcg cggacccagc acctcgaaca
     1381 gcttcttgac catgccgatg tcgcgcatct gcgcaatggc ttggcggcgc gcatacagat
     1441 caccgcgctt ggcaagcgtc accagcttct cgacgatcgg ccgcaaatcc ttcgccttcg
     1501 gcaacgtcgt cacgatctgc tcgtgcttga tcagagccgc cgccatgttg gcgaacatgg
     1561 cgcggcgatg ctcgtgggtg cgattgagct tgcgatgggc gatcccgtga cgcatgcgtg
     1621 tgctccgcac tcggcacagt caccagtgtc agcgatcaga tgaggttccg atcaccgatc
     1681 tgaccactga tgcctgtcaa taatgatcct cgaagcgctt ggccaactcg tcgatattgt
     1741 ccggaggcca gcccggcact tccatgccga gatgaagacc catctgggcc agcacctcct
     1801 tgatctcgtt gagcgacttg cgtccgaagt tgggcgtgcg cagcatctcg gcctcggtct
     1861 tctgaacgag atcgccgata tagacgatgt tgtcgttctt gagacagttg gccgagcgca
     1921 ccgaaagctc gagctcgtcc accttcttga ggaaggccgg attgaaggcg aggtcgggaa
     1981 ttgcctcggc gataacctcc ttgcgcggct cctcgaagtt gacgaatacg ttgagctggt
     2041 cctgcaggat gcgcgcggcg taagcgaccg cgtcgtcggg ggtcaccgca ccgttggtct
     2101 cgatctgcat cgtcagcttg tcgtaatcga ggatctgccc ttcgcgggta ttctcgacct
     2161 tgtaagagac cttacggacc ggcgaataga ggctgtccac cgggatgagg ccgatcggcg
     2221 cgtcctccgg ccgattgcgc tcggtgggga cgtaaccctt gccggtattg accgtgaact
     2281 ccatgcggat ctcggcgccc tcgtcgagcg tgcacagaac gaggtcgggg ttgagcacga
     2341 cggtatcgcc aacggtctgg atatcgccgg cggtgaccgc gcccggaccc tgctttttga
     2401 ccaccatgcg cttgggaccg tcgccctgca tcttgatggc gatgtccttg atgttgagca
     2461 cgatatcggt cacgtcctcg cgcacgcccg ggatcgacga gaactcgtgc agcacgccat
     2521 cgatgtggac cgactgcacg gcggcgccct gcagcgagga gagcagtatg cgccgcagcg
     2581 cattgcccag cgtcacgccg aagccgcgct cgagcggctc ggcgatgacg atggcctcgc
     2641 gcttgggatc gccgcctggc gttacctgca gcttgttcgg tcggatcagt tcctgccagt
     2701 tcttctggat cgtcacgttc gcacccatgc ctttgagcgc cgcggcggcg ggccgcgcac
     2761 cccactccgc cgcgggagaa ttttctgcgg tggcggtctc ctcgggagac cgccggatca
     2821 gcacatcgtc ggtcatactc ggcgcctctt gcgtggacgg cagccgttgt gtgggatcgg
     2881 cgtcacgtcg cgaattgagg tgatggtgaa cccggccgac tgcagcgacc gcaacgccga
     2941 ttcgcggccg gagcccggac ccgcgacctc gacttcgagg gtgcgcatgc cgtgctcctg
     3001 ggccttcttg gcggcgtcct cggccgccac ctgcgcggcg tagggcgtcg attttctcga
     3061 acctttgaag cccatggtgc cactggacga ccaggcgatg gtgtttcctt gcgcgtcggt
     3121 aatggtgatc atggtgttat tgaacgtcgc gttcacatgc gcgactccgg aagcgatgtt
     3181 cttgcgttcg cgtcgtcgga cgcgggtggc ttctttgccc attctcgatc ctctcgcagc
     3241 tcggcgctgc gatcgccggg ccgactgctg gtgctgtgcg cgcgcagcct cagttgcaca
     3301 ggctgcgtga attcaagtgc cactccaggg ctttacttct ttttgccggc aatcggcttg
     3361 gccggtccct tgcgggtgcg ggcattggta tgggtgcgct ggccacggac gggtagtccg
     3421 cgacgatgtc gcaacccgcg gtagcagccg aggtccatca gccgcttgat gttcatggcg
     3481 acttcgcgtc gcaggtcacc ctcaaccata tagtcgcggt cgatgacctc gcggatctgc
     3541 agcacttcct gatcggtcag ctgcgatacc cggcgggcgt ccgggattcc gactttctcc
     3601 atgatttcat tggccttttt ctgcccgatg ccatggatat attgcaatgc aataatgacc
     3661 cgtttgttgg tcgggatgtt gacaccggcg atgcgggcca cagtcaatca ctccttctgc
     3721 cgccggctca aagcggccag cgatcgtgct cgcgagggcg gttcgcaaac gataacgcga
     3781 caccctcccc gtcccgcagg gcccggtatc gttcgacctc tcgccttgga tggcggttat
     3841 taatggattc aacgtcgttt cgtcaacctc cgcccgggat tgcttttgcg ccgggcggac
     3901 tttcggggag cccgtgcgct gcggctctcc ttggccgttt tcgctttacc tttcatggac
     3961 ttggcgagtt tggcggctgg tactttcgac ttctggtcgg ctaccagcga cgccttcgct
     4021 cgcggtttgt tgttcgctgc ctgccgtagc gcccgatcaa tcgcgcttga cacctcggaa
     4081 atcgcggcca tgccatccac cgagcgcagc acgctctgca gttggtaata ggccgcgagc
     4141 ggcgccgttt ggtcgcggta ggccaggagc cgacgccgca acacctccgg atcgtcgtct
     4201 tcgcgcaacg cctcgcgccg cgccttcatc tcggcgatcc gcttcttgat gcgcttgagc
     4261 aggacgcctt cgtccacctt gagctcgatt actgcgtcga gcgtgaggcc cttctccttg
     4321 aggatgcgat cgagcgcgtg cgcctgcggc acggtccgcg gaaagccgtc gaggatgaag
     4381 ccattgcgcg catcgggctg gtcgatgcgc tcggagacga tcgccacaac gacgtcgtcc
     4441 ggcacgagct cgccgcgcgc catcaactcc ttggcgtgga gcccgatggc cgtgcccgcc
     4501 tcgaccgccg cgcgcagcat ctcgccggtc gagagctgca ccaggccatg cttggccacg
     4561 agtcgttgcg cctgcgtgcc tttgccggcc cccggcgggc cgagcaatac caacctcatc
     4621 tacgccgccc ccgcagcttc gaccgtttga tgagaccttc gtattggtgc gccaacaagt
     4681 atccttgaat ttgcgcaacc gtgtccatag tgacgctgac gacgatcaac agcgatgtgc
     4741 cgccgaaata aaacggcacc gcggcgtacg agatcaggat ctccggcaaa aggcagacaa
     4801 gcgccagata acccgcaccg atgaccgtga tgcgcgagag cacatagtcg atgtattccg
     4861 ccgtgcgctc gcccggccgg atgccgggaa tgaagccgcc atgctttttc aaattttccg
     4921 cggtttccgt cggattgaag acgatcgccg tatagaagaa cgcgaagaag acgatgaggg
     4981 cgatgtagag gaccaggaac agcggccgcc cgtgaccgag ctgggtggta atggcgacga
     5041 accaatccgg tccctgaccg gcgttgaagt tggcgacggt ggtcggcaac agcaggagcg
     5101 aggaggcgaa gatcggggga atgacgcccg acgtgttgag cttgagcggc agatgcgacg
     5161 actggccctc gaacatgcga ttgccgacct gacgtttggg atattggatc agcagccggc
     5221 gctgcgcgcg ctccatgaac acgatgaaag cgatcaccgc gaccaccatc accagcacca
     5281 ctaggatcag gccggtcgat agggcgcctt ggcggccgag ctcgagcgtt cccgcaatcg
     5341 ctgagggcag ttccgcgacg atgcccgaaa ggatgatcag cgagatgccg ttgccgatgc
     5401 cgcgcgaggt gatctgctcg ccaagccaca tcaggaacat ggtcccgccg gtgagcgtga
     5461 tgacggtgcc gatgcggaag aaccatccgg ggtcggtcac cacgttgccc gcgccttcga
     5521 ggccgacggc aatgccatag gactggaacg ccgccagcag caccgtcagg tagcgcgtgt
     5581 actggttcat caccttgcgc ccctgctcgc cctccttctt gagctgctcg agcgttggcg
     5641 acaccgtggt catcaactga atgatgatcg aggcagagat gtacggcatg atgttgagcg
     5701 caaagatcgc catccggtgg atgccgccgc cggaaaacat gttgaacatg cccagaatgc
     5761 cgcccgcctg ggaacggaag atctggtccc aggccgaagg gtcgataccg ggcagcggta
     5821 tgtaggtgcc gaaccgatag accagaagcg cgccgagcgt gaaccagatg cgcttcttga
     5881 gttcctccgc cttggcgagt gccgagaaat tgagattggc ggcgagttgt tcggctgcag
     5941 agaccatggg ctttcccgtt gcgcccccca aaagatcggc tgcgctctag agcgcgcgcc
     6001 gcgtcctata taagcatcag gcggtctgtt cgcctgtctc ccgcgacggc gccaagaggg
     6061 tgaccgaacc gcccgccttc tccactgcct gcgtcgccga cttggaggcg ccccagaccg
     6121 agaaggcgac gctcgtcttg atctcgccgg agccgagcaa ccgaacgccg tctttggccc
     6181 gtctgagcac gcccgctttc accaaggccg ccgcgtcgac tgttgcaccg gcatcgagct
     6241 tgccggcgtc gatcgccgcc tgaattttcc cgagattgac ctcgttgagc ctgcgcgcga
     6301 aagaggtgtt gcggaatccg cgcttcggca gccgacgatg gagcggcatc tgcccgccct
     6361 cgaagccctt gatgcgcacg ccggagcgcg cggcctggcc tttgccgccg cggccgcccg
     6421 tctttcccat gcccgagccg atgccgcggc cgatgcgcag gcgcttcttg cgcgccccgg
     6481 gacggtcggc gagttggtga agcttcatcg ctgctctccc tcggcctcca ccacgcggat
     6541 caggtgccta actttggcga tcatgccgcg agtttgcggg gtgtccggca actcgaccac
     6601 gcgtccgatc cgattgagac cgagcccgat caaggtctcg cgttgggtgt gatgacggcg
     6661 gatcgcgctg ccgatctgct cgatcttgag aaccttcgcg gtcgtgttca tatcggcctc
     6721 ccggcgcgtc cgaccttcag tcggcggcct gctcaccctc tccgagatcg cgtcgccgcg
     6781 cctgcagggt cgatactttg atattgcgcc gcgcggcgac cgagcgcggg gagtcttggc
     6841 gcttgagcgc gtcgaaggtt gcccgcacca tgttgtacgg gttcgacgag ccgagcgatt
     6901 tcgccacgac gtcctgcatg cccagcgttt cgaacacggc gcgcatcggc ccaccggcga
     6961 tgatgccggt cccggggggt gccgcccgca ggaatacgcg tccagcccca tggcggccgg
     7021 ctacgtcgtg gtgcagcgtg cggccttcgc gcagcgggac gcggatgaga ccgcgtttgg
     7081 cggcgtcggt tgccttgcga atcgcctccg gcacttcgcg cgccttgccg tggccgaagc
     7141 cgacccgtcc cttttcgtcg ccgaccacca cgagcgcggc aaagccgaag cggcgcccgc
     7201 ccttgaccac cttggcgacg cggttgatgt ggacgagctt atcggtgaat tcgctttcgc
     7261 gctcttcccg gtcgcggcga tcgcgtggtt cacgtgccat gattttgtcc caacttgctg
     7321 ttccctgcgg ccggcgccgg agagccaacc tttctgttca accctgacat ttccgctccg
     7381 tccgtctctc cgcgttcaga aatccagccc gccttcgcgc gcggcgtcgg cgagcgcctt
     7441 gacgcggccg tgataaaggt atccgccgcg atcgaacacg acctctttga tgcctttcgc
     7501 ggcggcgcgt tcggcgaggc gtttgccgac cgctttcgcc gcctcgatat tggcgccggt
     7561 cttgaggttg ccgcgcatgt ccttctccag cgaggaagcg gacacgacgg tttggccatc
     7621 ggcatcgtcg atcacctgcg cgtagatgtg tttcgacgag cggaagaccg aaagccgcgc
     7681 gcgacggccg ccggcgcggc ggacgtttcg ccgcactttc gccgtccgcc gcaaggtccg
     7741 atcagtgacg ctcgccatcg tgcgctccca tcatttcttc ttgccttcct tgcggaagat
     7801 gtattcgccc gcgtacttga cgcccttgcc cttgtagggt tcgggctttc ggaaagcgcg
     7861 gatttcggcg gcgacgtggc cgaccttctg ctggtcgatg ccggtgacga cgacctcggt
     7921 cgccttgggc accgcgatgg tgatgccctc cgggatcggg taaacgatat cgtggctgta
     7981 gccgagctgg acctgaaggt tcttgccctg cacggcggcg cgatagccga cgccggtgat
     8041 ctcgagccgg cgctcgaagc ccttggtaac gcccgtcatc gcattggcga gcagcgaccg
     8101 gtaggtcccc cacatggccc gcgcgcgctt ggtgtcggcg cgcggatcga tcttgacctc
     8161 gctgccttcg accttggccg ccacatcgcc gtgcagcgcg accgcaagcg cgcccttggg
     8221 gcccttcacc ttgacgacct gaccttccac gctggcggtg acgccggagg gaatcgcaac
     8281 aggttttttt ccgacacgag acatggctgc tggtccgttg gggtgctgtt agaacgatcg
     8341 ctcggcggtc atgcacggcc gcggattgca ccgcgactcg ggctccttcg tttcatgtca
     8401 aaagacggtg cagagaattt ctccgcccac attgttgtcg cgcgcgtcgt gatcggccat
     8461 cacacccttg ggtgtcgaca ggatcgcaac ccccaatccg ttgttcacac gcggaagcgc
     8521 cttgaccgag gcatagaccc gccgccccgg cttcgatacc cgcgaaatct cgcggatcac
     8581 cggctcgccg tccgagtatt tcagctcgat ctcgagttct ttgcgcccgt tcgagtgctc
     8641 gaccgccgcg tagccgcgga tgaagccttc ggtcttgagc acatccagca cgctgacgcg
     8701 caacctggat gccggcgtcg acaccttcga cttgttgcgc atttgtgcat tgtaaatgcg
     8761 cgcgatcata tcgccgagcg gatcgttcat acccatcgcc ccgccctcct taccagctcg
     8821 acttgaccaa gcccgggatc agccccttgg agccgagatc ccgaagcgc
//
LOCUS       DATCWM010000387         2146 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_456324, whole genome shotgun sequence.
ACCESSION   DATCWM010000387 DATCWM010000000
VERSION     DATCWM010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2146
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_456324"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..769
                     /locus_tag="VIQ50_07470"
     CDS             <1..769
                     /locus_tag="VIQ50_07470"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY9360254.1"
                     /translation="SVAAAAGADGELVLADGRTLKADLIVGADGSNSAVREAVGLLWK
                     RKFLVDGATRLLIAKTEQERLAADAGTTVEYWSGTRRVLYTPCSENDVYIALTMLDRD
                     ETAKATPVRKDAWKRWFPHLEPLIERFGEQGRYDRFDLIKLRRWSAGRVALVGDAAHA
                     QPPNIGQGGGCAMMNALSLAVHLERHADVSAALAAWEKNERPITEHAQRISYLLGLPT
                     TWPPLLRAIALGWAGRSKWLVRQRTKAALHRPTGTTP"
     gene            868..>2146
                     /locus_tag="VIQ50_07475"
     CDS             868..>2146
                     /locus_tag="VIQ50_07475"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEY9360255.1"
                     /translation="MSNVDAELDRLIAPGRVHRRIYSDPAIFELEMDRIFGAAWIYVG
                     HESQIKNPGDYFATRMGRKPVVLVRDEQGAVRVIHNQCAHRGALVVATDQGKAAEFIC
                     CYHGWTYHLDGRIKAVPLNHGYPQGFDPKNPKMAMLPLPRVKSYRGFVFASEASDGPS
                     LEEWLGHMTTSLDDMIDRAPDGEIEVAGGMFKHAYDGNWKVYFENLCDAAHPLFTHRS
                     SIDAALQQSDDVHSDGAGEIAIRQMRQNGAPYSFWESQVGIWTYPNGHSYLGDYHDDA
                     KLVAALKDPVFREYIAALERKKGNAEVKRILEVRRWNSNIYPNVSLMSQFQQLRVVHP
                     IAVNRTVVHAYSFRLKGAPDQMFRNTISFANIVNGTGSLVLTDDLEIYNRLDLGMSSE
                     GCEWLQVGRGYQSDLPDPHGGRKGINSTSEVYIR"
BASE COUNT          411 a          698 c          695 g          342 t
ORIGIN      
        1 ctcggttgcg gccgctgccg gtgccgacgg cgagctcgtg ctcgcggacg ggcgcacgct
       61 caaggccgac ttgatcgtcg gcgccgacgg cagcaactcg gccgtgcgcg aggcggtcgg
      121 gctgctgtgg aaacgcaagt ttctggtcga tggcgcgacg cggctgctga tcgcgaagac
      181 cgagcaggag cgtctggcgg cggacgccgg caccaccgtc gaatactggt cgggcacgcg
      241 gcgcgtgctc tacacgccgt gcagcgagaa cgatgtctac atcgcgctca cgatgctcga
      301 tcgcgacgag actgccaagg caacgccagt gcgaaaggat gcgtggaaac gctggtttcc
      361 ccatctcgag ccgctgatag agcgcttcgg cgagcaaggc cgctacgatc gcttcgacct
      421 gatcaaactg cgccgctggt cggcggggcg cgtggcgctc gtcggcgatg ccgcgcacgc
      481 gcagccgccg aatatcggac agggcggcgg atgcgccatg atgaacgcac tgtcgcttgc
      541 ggtacatctc gaacgccatg ccgacgtttc cgccgcgctc gctgcgtggg aaaagaacga
      601 gcggccgatc accgaacacg cgcaacggat ttcctacctg ctcggtctgc cgaccacttg
      661 gccgccgctg ctgcgggcaa tcgcgctcgg ctgggcgggg cgttcgaaat ggctcgtccg
      721 ccagcgcacg aaggcggcat tgcaccggcc gacggggacg acgccatagc gacacacctc
      781 gcccacatac gccttgcggg tagcgtcgcg gccggcggcg cgatgcgcta tcatcggcaa
      841 ccgcgtcagg acgatggtaa ggagacaatg agcaacgtcg atgccgagct tgatcggttg
      901 atcgcgcccg gacgcgtgca ccgccgcatc tacagcgatc ccgccatctt cgagctggag
      961 atggaccgta tcttcggcgc cgcgtggatt tatgtcggcc acgagagtca gatcaagaac
     1021 ccgggggatt atttcgccac gcgcatgggg cgcaagccgg tcgttctggt gcgcgacgag
     1081 cagggcgcgg tgcgtgtgat ccacaaccag tgcgcccacc gcggggcgtt ggtggtggcg
     1141 accgaccaag gcaaggcggc agaattcatc tgctgctacc acggctggac gtatcatctc
     1201 gacggccgca tcaaggcggt gccgcttaac catggatatc cgcagggctt cgacccgaag
     1261 aatccgaaaa tggccatgct gccgctgccg cgggtgaaga gctatcgcgg cttcgtcttc
     1321 gcgagcgagg cgagcgacgg acccagtctc gaggaatggc tcggccacat gacgacgtcg
     1381 ctcgacgaca tgatcgatcg cgcgccggac ggagagatcg aggtcgccgg cggcatgttc
     1441 aagcacgcct atgacggcaa ctggaaggtc tatttcgaaa acctgtgcga tgcggcgcat
     1501 ccgctgttca cccaccgctc ctcgatcgac gccgcgctgc agcagtccga cgacgtgcat
     1561 agcgacggcg ccggcgagat cgccattcgc cagatgcgcc agaacggcgc accctacagc
     1621 ttctgggaat cgcaagtcgg gatctggacc tatccgaacg gccacagcta tctcggcgac
     1681 taccacgacg acgccaagct cgttgccgcc ctcaaggatc ccgtcttccg cgagtacatc
     1741 gccgcgttgg aacgcaagaa aggcaacgcc gaggtgaaac gcatactcga ggtgcgccgc
     1801 tggaactcca acatctaccc gaacgtctcg ctgatgagtc aattccagca actgcgcgtg
     1861 gtgcacccga tcgcggtgaa ccgcacggtc gtgcacgcct acagcttccg gctcaagggc
     1921 gcgcccgatc agatgtttcg caacaccatc agcttcgcca acatcgtcaa cggcacgggc
     1981 tcgctggtcc tcaccgatga cctcgaaatc tacaatcgtc tcgacctggg aatgtcgagc
     2041 gaaggctgcg agtggctgca ggtcggtcgc ggctaccaga gcgacctgcc cgacccgcac
     2101 ggcggccgca agggcatcaa ctcgacgagc gaggtctata tccgca
//
LOCUS       DATCWM010000388         5600 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_359268, whole genome shotgun sequence.
ACCESSION   DATCWM010000388 DATCWM010000000
VERSION     DATCWM010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5600
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_359268"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1705)
                     /locus_tag="VIQ50_07480"
     CDS             complement(<1..1705)
                     /locus_tag="VIQ50_07480"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit B"
                     /protein_id="HEY9360256.1"
                     /translation="MAEPARQTPPLASEYDSDSIKVLKGLDAVRKRPGMYIGDTDDGS
                     GLHHMVYEVVDNAIDEALAGFAKEVLVTLNPDGSCTVRDDGRGIPTDIHKGEGVSAAE
                     VIMTQLHAGGKFDQNAYKVSGGLHGVGVSVVNALSSWLKLTIWRDGHEHFMEFRDGEA
                     VTPLSVGGPAPDKRGTEVTFLPSPQTFTMTEFDFATLEHRLRELAFLNSGVLIVLSDM
                     RHPVEKREEMRYEGGVEAFVKYIDRNKTPLVPAPIMIKGEREGIAVECALWWNDGYHE
                     AVLCFTNTIAQRDGGTHLAGFRGALTRQVTGYAEKSGVMQKERVALTGDDCREGLTAV
                     LSCKVPDPKFSSQTKDKLVSSEVRPVVENIINEALQYWLEEHPAEARVIVGKVVEAAA
                     AREAARKARELTRKKGALDVSSLPGKLADCQERDPARSELFIVEGDSAGGSAKQGRNR
                     AFQAVLPLRGKILNVERARMDKMLSSQEIGTLITALGTGISEEFNPDKLRYHKIIIMT
                     DADVDGSHIRTLLLTFFYRQMRDLIDRGYIYIAQAPLYKVSRGKSEQYLKDERALEDY
                     LI"
     gene            complement(1950..2930)
                     /locus_tag="VIQ50_07485"
     CDS             complement(1950..2930)
                     /locus_tag="VIQ50_07485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007009001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH:quinone reductase"
                     /protein_id="HEY9360257.1"
                     /translation="MRAAYYETNGAAREVLRVAEVETPEPGPGEVRVRLAASGVNPSD
                     VKSRAGLTRKIAFPRVIPHSDGAGEIDRVGEGVSPSRVGERVWVWNGQWRRPFGTAGQ
                     SIVLPSEQAVPLPANISMEAGACLGIPAYTAYQAVELAGCGDGSSVLVAGGAGAVGHY
                     AIQFAKKRKATVITTVSSPSKGEIARRAGADHVIDYRREDVGERVMAITAKRGVNAVI
                     ELDLGANAQLLPAVLASNGVVAIYGSGSPEVSIPFQFLLQNSIALKFFLVYLMPPQLR
                     ARATADITRMLERGELIHNVAQTFGLGEIVAAHEAVESGKAMGNIVVSTA"
     gene            complement(2996..4138)
                     /gene="recF"
                     /locus_tag="VIQ50_07490"
     CDS             complement(2996..4138)
                     /gene="recF"
                     /locus_tag="VIQ50_07490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HEY9360258.1"
                     /translation="MSAARIRRLTVTNFRSYRAAQLEPGAGAVVLVGANGSGKTNLIE
                     AISFLTPGRGLRRATLEDIAFSEGDGSWAVSAEVEGALGLATLGTGIEPPANEDAVVT
                     RKCRIDREPVASAAAFADHLRVVWLVPAMDGLFNGPASERRRFLDRFALALDAEHMTR
                     VNALERALRSRNRLLEDIRPDPHWLDAIEHETAELAVAVTALRVETVDRLQAILLARA
                     HPAAAFPAAGIALDGWMERLVPLEPAVAVEDRYRALLRDNRGRDAAAGRTLEGPHLTD
                     LAVTYADKQIAAKEASTGEQKALLIGLVLTHAGLLAEMSGYAPVLLLDEVVAHLDPAR
                     RAALYAELDQLGAQAWMTGADAAAFAEIEANADMFEIVPGEVKRRA"
     gene            complement(4243..5361)
                     /gene="dnaN"
                     /locus_tag="VIQ50_07495"
     CDS             complement(4243..5361)
                     /gene="dnaN"
                     /locus_tag="VIQ50_07495"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEY9360259.1"
                     /translation="MKVTVERAALLRSLGHVHRVVERRNTIPILANVLIKAEKSKLSF
                     KATDLDVEVTETIAAEVGPGGATTVPAHMFYEIVRKLPEGAQIVLEASGDRAVLTIRA
                     GRSRFTLQTLPESDFPDLAAGEMTHTFKVTAADLKRLIDKTQFAISTEETRYYLNGIY
                     LHTAGTAKESTLRGVATDGHRLAQFELPLPSGASGMPGIIVPRKTVAEVQRLIEDNEA
                     EITIEMSQGKIRFRLGDTVLTSKLIDGTFPDYVRVIPLGNDKELTVDKKEFEQAVDRV
                     STVSSERGRAVKLSLTNGKLMLSVTNPDSGSATEEIEVEYGADPLDIGFNSRYLLDIA
                     AQLEGEAAVLKLADPGSPTLIQDRDTKGALYVLMPMRV"
BASE COUNT          930 a         1804 c         1850 g         1016 t
ORIGIN      
        1 cgatcaggta atcttcgagc gcgcgctcgt ccttcagata ctgctcggat ttgccgcgcg
       61 agactttgta gagcggcgcc tgcgcgatgt agatgtagcc gcggtcgatg aggtcgcgca
      121 tctgacggta gaagaacgtg agcagcagcg ttcgaatgtg cgaaccgtcg acgtcggcat
      181 ccgtcatgat gatgatcttg tggtagcgca gcttgtccgg attgaactcc tcgctgatgc
      241 cggtcccgag cgcggtgatg agcgtgccga tttcctggct cgagagcatc ttgtccatgc
      301 gcgcgcgctc gacattgagg attttcccgc gcagcggcag caccgcttgg aatgcgcggt
      361 tgcggccctg cttggcggag ccgcccgcgc tgtcgccttc gacgatgaac aattcggatc
      421 gcgccggatc gcgctcctgg cagtcggcca gcttgccggg aagggaggac acgtcgagcg
      481 cgcccttctt gcgcgtgagt tcgcgcgcct tgcgcgcggc ctcgcgcgca gccgccgcct
      541 cgacgacctt gccgacgatg accctcgcct ccgccggatg ctcctccagc cagtattgca
      601 gcgcctcgtt gatgatgttc tcgaccacag gacgcacctc ggaggagacg agcttgtcct
      661 tggtctgcga ggagaatttc ggatccggca ccttgcagga gaggacggcg gtgaggcctt
      721 cgcggcaatc atcgccggtc agcgcgaccc tctccttctg catcacaccg ctcttctccg
      781 catagccggt gacttgccgg gtaagcgcgc cgcggaagcc ggcgagatgg gtgccgccat
      841 cgcgttgcgc gatggtattg gtgaagcaga gtacggcctc gtggtagccg tcgttccacc
      901 acagcgcaca ttccaccgcg atgccctcgc gttcgccctt gatcatgatc ggcgcgggaa
      961 cgagcggcgt cttgttgcgg tcgatatatt tgacgaatgc ctcgacgccg ccctcgtagc
     1021 gcatctcctc gcgcttctcg acgggatggc gcatatcgga gaggacgatc agaaccccgg
     1081 agttgaggaa tgcgagctcg cgcagccggt gctccagcgt cgcgaaatcg aattcggtca
     1141 tggtgaaggt ctgcgggctg ggcagaaacg tcacctcggt gccgcgcttg tcgggggccg
     1201 ggccgccgac cgacaagggg gtgaccgcct cgccgtcgcg gaactccatg aaatgttcgt
     1261 ggccgtcgcg ccagatggtg agcttgagcc agctcgacag cgcgttcacc accgacacgc
     1321 cgacgccatg cagcccgccc gaaactttgt aggcgttctg atcgaatttc ccgccggcat
     1381 ggagctgggt catgatgacc tcggccgccg agaccccttc gcccttgtga atgtcggtcg
     1441 ggatgccgcg gccatcgtcg cgcacggtgc aggagccgtc cggattgagc gtgacgagca
     1501 cctccttggc gaaaccggcg agcgcttcgt cgatggcgtt gtcgacgacc tcgtagacca
     1561 tgtggtgcag gcccgagccg tcgtcggtgt caccgatata catgcccggc cgcttgcgca
     1621 cggcgtcgag gcccttgagg accttgatcg aatccgaatc gtattcggag gcaaggggcg
     1681 gagtctgacg ggcaggttcg gccatggacg atgtcgaatc agtttcgcaa gtgaggggca
     1741 aaatcggggt ttggtttggc acgaaaaagc ggtgccgtac agcccaaagt gataacctgt
     1801 aagtggctgt tttttttgaa atttcaaggc ctgtcgcggc ccaaaaaaag ccccggaaat
     1861 ggctcctttg cggctctccc cggcgccgca ttttgcgcct ccggccccac tgtttcgagt
     1921 gccctctccg gggccaaacg cgcgcagcgc taagcggtgc tcacgacgat attgcccatc
     1981 gccttgccgg actcgacggc ttcatgcgcg gcgacgatct cgccgagacc gaaggtctgc
     2041 gccacgttgt ggatgagttc cccgcgctcg agcatgcgcg tgatgtcggc ggttgcgcgt
     2101 gcgcgtagct gcggcggcat caggtaaacc aggaaaaatt tcagcgcgat actgttctgg
     2161 agcaggaatt ggaacggaat cgacacctcg ggggagccgc tcccgtagat cgccaccacg
     2221 ccgttcgagg cgagcacggc gggcaagagc tgcgcattgg cgccgagatc gagttcgatc
     2281 accgcgttca cgccgcgttt tgcggtgatg gccatcacgc gctcgccgac gtcctcgcgc
     2341 cggtaatcga tcacatgatc ggcgccggcg cgccgggcga tctcgccctt gctcggcgag
     2401 ctgacggtgg tgatgacggt ggccttgcgt ttcttcgcga actggatggc gtaatggccc
     2461 accgccccgg cgccgccggc gacgaggacg ctcgagccgt ctccgcaccc ggcgagttcc
     2521 accgcctgat aggcggtgta ggccggaatg ccgaggcatg ctccggcctc catgctgata
     2581 ttggcgggca aaggcacggc ctgctccgag ggcagcacga tcgattggcc ggcggtaccg
     2641 aacggacgac gccactggcc gttccaaacc cacacccgct cgcccacgcg cgagggggaa
     2701 acgccttcgc ctacgcgatc gatctcgccc gcgccgtcac tgtgcggaat gacccgtgga
     2761 aaggcgatct tgcgcgtcaa gccggcgcgg ctcttgacgt cggaaggatt gacgccggag
     2821 gcggcaagcc gcacccgaac ctcgccgggt cccggctctg gcgtctccac ctcggcgact
     2881 cgcagtacct cgcgggccgc gccgttcgtc tcgtaatagg cagcgcgcat gcatgctcct
     2941 tcggccgctg gatcgtccgc tccgtgcgga tgatgccaca gaaccggcgc gacaatcacg
     3001 cccgccgctt cacctctccc ggtacgatct cgaacatgtc cgcgttggct tcgatctcag
     3061 cgaaggcggc ggcgtcggcg ccggtcatcc aggcttgcgc gccaagctgg tccagctcgg
     3121 cgtagagcgc ggcccgccgg gcggggtcga gatgggcgac aacctcatcc agcagcagca
     3181 ccggcgcgta tcccgacatc tcggcaagca gaccggcatg agtcaggacg aggccgatga
     3241 gcagcgcctt ctgttcaccg gtcgaagcct ccttcgcggc gatctgcttg tccgcgtagg
     3301 taacggcgag gtcagtgagg tgcggcccct cgagcgtgcg tcccgcagcg gcatcgcggc
     3361 cgcgattgtc cctgagcagt gcgcgatagc gatcctccac cgcaacggcc ggctcgagcg
     3421 ggacgagtcg ttccatccag ccatcaagcg cgatgccggc cgcgggaaat gccgcggcag
     3481 gatgcgcgcg cgcgaggagg atagcttgca gccggtcgac ggtttccacc cgcaatgccg
     3541 tcaccgcaac cgcaagctcg gcggtttcgt gctcaatggc atcgagccag tgcggatccg
     3601 gacggatatc ctcgagcagc cggttgcgcg agcgcaacgc gcgttcgagc gcgttgaccc
     3661 gcgtcatatg ctcggcatcg agcgccagcg cgaaccggtc gagaaatcga cggcgctcgg
     3721 acgccggccc gttgaacaag ccgtccatgg ccggcaccag ccaaacgacg cgcaaatgat
     3781 cggcgaacgc cgctgccgat gcgaccggct cgcgatcgat gcggcatttg cgggtgacga
     3841 ccgcgtcctc gttcgcgggc ggctcgatgc cggtgcccaa cgtcgccagt cccagcgcac
     3901 cttctacctc cgccgatact gcccacgaac cgtcgccttc ggaaaaagcg atgtcttcga
     3961 gggttgctcg ccgcagaccg cgtcccggcg tcagaaacga aatcgcctcg atcaggttcg
     4021 tcttgccgga gccgttggcg ccgaccagca ctaccgctcc cgcgcccggc tcgagctggg
     4081 cggcgcggta gctgcggaaa ttcgtgacgg tgaggcggcg gatgcgggca gcggacatac
     4141 cggtaatcag taatgactga tcggaaaaca gcaatcaggc gccgcgtccg cgacgctgcc
     4201 atccgctgcc ggctcttgac gactggccgc gccgatcccc cgctacaccc gcatcggcat
     4261 gagcacgtag agcgcgcctt tggtgtcgcg gtcctgaatg agcgtgggcg atcccggatc
     4321 ggcgagcttt agcaccgcgg cctccccttc aagctgcgcc gcgatatcga gcagatagcg
     4381 ggaattgaag ccgatatcca acgggtcggc gccgtattcg acttcgatct cttcggtcgc
     4441 gctgccggaa tccgggttgg tgacggacag catcagcttg ccgttggtca gcgacagctt
     4501 gaccgcgcgg ccgcgctcgc tcgacaccgt ggagacacga tcgacggcct gctcgaactc
     4561 tttcttgtcg acggtgagct ccttgtcatt gccgagggga atgacgcgca cgtagtcagg
     4621 aaaggtgccg tcgatgagct tggacgtgag caccgtatcg ccgagccgga agcggatctt
     4681 gccctgcgac atctcgatgg tgatttccgc ctcgttgtcc tcgatcagcc gctgcacctc
     4741 ggcgacggtc ttgcgcggaa caatgatgcc gggcattccg ctcgcgccag aaggcagcgg
     4801 cagttcgaat tgcgcaaggc gatgcccgtc ggtggcgacc ccgcgcagcg tagactcctt
     4861 ggcggtgccg gcggtgtgca gatagatgcc gttgagatag taacgcgtct cctcggtcga
     4921 gatggcaaac tgggtcttgt cgatgagccg tttgagatcc gcggccgtga ctttaaacgt
     4981 gtgcgtcatc tcgcccgccg ccagatcggg aaaatcgctc tccggcagcg tctgcaaggt
     5041 gaagcgggaa cggcccgcgc gaatcgtcag caccgcgcgg tcgccggacg cttcgaggac
     5101 gatctgcgcg ccttccggaa gcttgcgcac gatctcgtag aacatgtgcg cgggcaccgt
     5161 ggtggcgccg cccgggccta cctcggcggc gatcgtctca gtcacctcga catcgaggtc
     5221 ggtcgccttg aagctgagct tcgatttctc cgccttgatc aagacgttgg cgagaatggg
     5281 aatggtgttg cgccgctcga ccacgcgatg gacatggcct agcgacctca acagtgctgc
     5341 gcgttcgacg gtgactttca ttgttccatc cgcccactcg cgtggaagtc tcgaagggct
     5401 gacgaaggtg gcgcggacgg gggtttttcg caagggcgcg ggcaccggcg gcgccactta
     5461 cccaacggat ttggccgcag ctagggggcg gacgggcggg tggcgcccgg agcgggggcg
     5521 gggggtgctt ggcctgcggc cggctttttg tcccttcgct cggcagcgcg gtctcgccgg
     5581 cggcacctac tcctgcagtt
//
LOCUS       DATCWM010000389         6092 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_526721, whole genome shotgun sequence.
ACCESSION   DATCWM010000389 DATCWM010000000
VERSION     DATCWM010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6092
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_526721"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..194)
                     /locus_tag="VIQ50_07500"
     CDS             complement(<1..194)
                     /locus_tag="VIQ50_07500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360260.1"
                     /translation="MAHVEALQTLPPQAAATAALVQFVGDVRHADLPDEVRHYARRHV
                     LDTVGVMIAGATGEVARRAEA"
     gene            complement(393..875)
                     /locus_tag="VIQ50_07505"
     CDS             complement(393..875)
                     /locus_tag="VIQ50_07505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008133918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360261.1"
                     /translation="MKKLIMSALTLAVLQNSASAAPGSATGPTALALAAVIAQHSPAV
                     RAFDKRVIARLFRGNTRFGFAPNTKISVDADSVVCRVSNVDITSRSCELTFGSRKRTL
                     TGREANEVGATAAAAGVPSEGAAGSSIESISKLRCTIDPNEIMQKAGGGANCTFETGQ
                     "
     gene            1122..2867
                     /locus_tag="VIQ50_07510"
     CDS             1122..2867
                     /locus_tag="VIQ50_07510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020085400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEY9360262.1"
                     /translation="MRPAIDPRRGDIEDDASSSKRRSLLSLAGSLLAEISLPKLVVAF
                     TLLVIVPGLALGIAPIAAAIWFGKLSSKLASALAGVWPALLLVIVVAVGWFGGRQLLR
                     LAENSFWSLNSLIVQPAYTVCREGLRQFAERLLPAQASKTQRSRLRAAAALVSGAMIC
                     GVALLVLIQVLPHADLLRGAAGVGSLKHLAAVALANTMVLVAGYLAVAALVWGIADAT
                     MAQPCDLEQFDQPRDDVRTWRIAHLSDVHVVGERYGFRLESGRLGPRGNERLARLLAQ
                     LDLVHASDPLDAIVVSGDMTDAGRSSEWAEFLGAVLRHPRLIERMLIIPGNHDLNIVD
                     RANPARLDLPTSPNKRLRKLRVLSAMGIVQGERVRIVDRATGHLGATLASALEPHLKQ
                     IARFADVGRPWLSRRLSQLWTDAFPMVLPPDADDGLGIILLDSNADTHFSFTNALGMI
                     PVDQARGLEIACAQYPYACWIVVLHHHVVEYPRPARALSERVGTALINGNWFVRRLKP
                     LAGRVVLMHGHRHIDWIGECGGMSILSAPSPVMEATDDVPTYFYIHTLAIGDDRRLKL
                     LRPQRITIEGEPSIP"
     gene            complement(2864..3862)
                     /locus_tag="VIQ50_07515"
     CDS             complement(2864..3862)
                     /locus_tag="VIQ50_07515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007801501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEY9360263.1"
                     /translation="MLGLSTAVLLFAGLYFARSILAPVAFSLFVIAIVWPLQRTLETR
                     VPRLLALVATLVVTLLVIAVLGYLIVWSFGTVGRWVIDNALRFQALYLQWTDWLEEHG
                     ILVTSFLVENFNAGWLIRAVQEIGGRLQGLVTFVVITFVFTALGLLEVDIARKNIETL
                     SNKEAAQTILQASTLIADKFQRYMLVRSAMSVLTGLVVWAFALLAGLELATAWGLIAF
                     VLNYIPFIGPLVATVFPTIFALVQFGSWQLAAIVFLVLNLIQFLIGSYLEPRIAGAAL
                     SLSPFVVLFAVFFWAFLWGVPGAFIGVPIVIAALTLCEQRESTRWIAALLSGRERR"
     gene            complement(3919..4956)
                     /locus_tag="VIQ50_07520"
     CDS             complement(3919..4956)
                     /locus_tag="VIQ50_07520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013164992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEY9360264.1"
                     /translation="MTTDIVETTRAPILVDFALQGGGAHGAFTWGVLDRLLEEPWLRI
                     DGISGTSAGAMNAAVLVDGYADKGADGARAALENFWRRVSRAALLSPLRRTPLDVLLG
                     RWTLDHSPAFVAMDLMARLFSPYDMGPRANPLRDILTEIVDFDRLMRATIKLFVTATN
                     VRTGRGRVFRNSEITPDVLLASACLPTMFQAIEIEGESYWDGGYSGNPTITPLVRECT
                     SKDTILVQINPVERPALPRSARDILNRLNEVSFNAVLLKELRMIALLCHVTQPENCES
                     ARWADMRIHRITSEMMVELGYSSKLNAEWEFLCMLRDEGRRAGATFLSAHGDDLGRRS
                     TFNLDELLEGV"
     gene            5174..6061
                     /locus_tag="VIQ50_07525"
     CDS             5174..6061
                     /locus_tag="VIQ50_07525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360265.1"
                     /translation="MANSLRPVTVAPKGMGLYDFVAHQEGFFAAEGLDVEFDWKTFRG
                     TQSSWKGLDYFQRPQDQPYTQDKREVIQGACVWGTICNASAGMGKMVPDAYGVSPWAI
                     FVRPNSPIRRPEDLKDVPVSVGMRAGSHFNVPYRLEKYLPLENIKVVNTGGFGARLKA
                     LLDGEVEAASLLPPQIAMAEQLGLRQIIADTFKTLWWVPDNFEPDAVRSYLRALDGAE
                     KAMDDGMGKYLPLWKLAVPAEFENFHPWDYSKFGRGERFYYRTLPREEFDDTLAQVKR
                     WGLDQYLKDRSYETLSYSR"
BASE COUNT         1136 a         1909 c         1937 g         1110 t
ORIGIN      
        1 gcttcggcac ggcgcgccac ctcgccggtc gcgcccgcga tcatgacgcc gacggtgtcg
       61 aggacatggc ggcgcgcata atggcgcacc tcatcgggga ggtccgcatg gcgcacgtca
      121 ccgacgaatt ggacgagcgc cgcggtcgcg gcggcctgtg gaggaagcgt ctgcagcgct
      181 tcgacgtgag ccaaggatat cctcccgagg tcgcgacgcg cggccaaatt taaagcctat
      241 gcggttgccg caggctgcac cagagaaagc ctgcgacggc tcagaccgtg cgcgatccgc
      301 cgctcatccg caatcgcttc atgcgcgggc tcggcacctc ccgcgcgagc gcgctcgacg
      361 ggtaacgctc gcccggcaat gcgcgaagac ctctactgcc ccgtctcgaa agtgcaattc
      421 gcgcccccgc ccgccttctg catgatctcg ttcggatcga tcgtgcaacg caatttcgag
      481 atgctttcga tgctcgagcc tgcggcaccc tcggagggca cgccggcagc cgccgccgtt
      541 gcgccgactt cattggcctc gcgcccggtc agcgtgcgtt tgcgcgaccc gaaagtgagc
      601 tcgcagctgc gcgaggtgat gtcgacattg cttacgcggc agaccacgga gtccgcatcg
      661 acggaaatct tcgtgttcgg ggcaaagccg aatcgagtgt tgccgcggaa aaggcgcgcg
      721 atgacgcgct tatcgaacgc gcgcaccgcc ggcgaatgtt gcgcgatcac cgcggctaag
      781 gccaaggcgg tcggcccggt tgcgcttccc ggcgcagcgg acgcagagtt ttgcaaaacc
      841 gcgagcgtca atgccgacat aatcagcttc ttcatctctg cggcctcctt cggtctctct
      901 gcgtcggcaa tccgcgcgtg cggtgtgccc gcgatggctt gaccagcgaa aacggaaacg
      961 cccggcggga cgttcaacct cgattgggtg ccggagtgtg gctcagcgcg acgcaaatgt
     1021 cgaacccagc gcaaacccga aacgcattga cgcagcctcc tagcaaggtc aggcttgtcc
     1081 tgcgcgcgat actggtgatt gcacgtcttc ggaggtgctg cttgaggccg gctatcgatc
     1141 ctcgccgtgg cgacatcgag gatgacgcgt cgagctccaa gcgccgctcg ctcttatcgc
     1201 ttgccggcag tctgctcgcg gagatcagtt tgccgaagct ggtcgtcgcc ttcactctcc
     1261 tcgtcatcgt gccgggtttg gcgctaggga tcgcgccgat cgccgccgcg atctggttcg
     1321 gtaaactttc gagcaagctt gcttccgcgc ttgctggcgt ttggcctgcc ctcctgcttg
     1381 tgattgtcgt cgctgtcggc tggtttggcg gccggcaatt gctgcgcttg gcggagaaca
     1441 gcttctggtc gctcaactcg ctcatcgtgc agccggctta tacggtttgc cgcgaggggc
     1501 ttcgccaatt cgccgagcgg ttgctgcccg cgcaggcaag caaaacgcag cgctcgcggc
     1561 tgcgtgccgc cgcggccttg gtctccggtg caatgatctg cggcgttgcg ctgctggtgc
     1621 tgatccaggt cttgccgcat gcggatttgt tgcggggcgc tgcgggcgtg ggatcgctca
     1681 agcatcttgc ggcagtggcc ttggccaaca caatggtgtt ggttgccggc tatctcgcgg
     1741 tggctgcgct ggtctgggga atcgctgatg cgacgatggc gcagccctgc gatctcgagc
     1801 aattcgatca gcctcgcgac gacgtgcgca cctggcgcat cgcgcatttg tccgacgtgc
     1861 acgtcgtcgg cgaacgctac ggctttcgtc tcgaaagcgg caggttgggg cctcgcggca
     1921 acgagcgtct ggcgcggctg ctcgcacagt tagaccttgt gcatgcgagc gatccgctcg
     1981 acgccatcgt ggtgagcggg gacatgacag acgccggtcg ctccagcgag tgggccgaat
     2041 tcctgggcgc agtcttgcgt catccccgtc tcatcgaacg aatgctgatc attcccggca
     2101 accacgacct gaacatcgtc gatcgcgcca atccggcgcg cctcgatctt ccgaccagcc
     2161 cgaacaagcg gctgcggaag ctgcgggtcc tgtcggcaat gggaatcgtt cagggcgagc
     2221 gcgtgcggat agtggatcgt gcgacggggc atctgggcgc aacgctcgcc tccgctttgg
     2281 agccgcatct caagcagatc gcgagattcg ccgacgtcgg cagaccctgg ctgtcgagac
     2341 gacttagcca attgtggacc gacgcttttc cgatggtgct gccgccagat gcggacgatg
     2401 gcctgggaat catcctgctc gactcgaatg ccgatacgca tttctcgttc accaatgcgc
     2461 tcggcatgat tccggtcgat caagcccgtg gcctggagat cgcgtgcgcg cagtacccgt
     2521 atgcctgctg gatcgtcgtt ctccatcatc acgtcgtcga gtatccgcgc ccggcacggg
     2581 cgctgtcgga gcgcgtcggc acggccctga tcaacggcaa ttggttcgtc cggcggctca
     2641 agccgcttgc cggccgcgtg gtactcatgc acggtcaccg gcatatcgat tggatcgggg
     2701 aatgcggcgg aatgtctatt ctctcggcgc cctcgccggt catggaagca accgacgacg
     2761 tgcccacgta cttctatatc cacacgctcg cgataggaga cgaccggcga ctgaaattac
     2821 tgcggccgca gcgcatcacc atagaaggtg aaccgagcat cccctagcga cgctcgcgtc
     2881 ccgacagaag cgccgcgatc catcgcgtgg actcccgttg ttcgcacagc gtaagtgctg
     2941 cgatcacgat cggcacgccg ataaacgcgc ccggcacgcc ccagagaaag gcccagaaga
     3001 ataccgcgaa caggaccaca aacggtgaca atgagagggc cgctcctgcg atgcgcggtt
     3061 ccaggtagct cccgatcagg aactggatga gattgagcac caggaagacg atggcggcca
     3121 attgccatga gccgaactgc acgagcgcga aaatggttgg aaagacggtc gccaccagcg
     3181 gcccgataaa tgggatgtag ttcagcacga aggcgatcag gccccacgcc gtcgccaatt
     3241 caaggccggc gagcagcgca aaagcccaga ccaccaggcc cgtcagcacg ctcattgcac
     3301 tgcgaaccag catgtatctc tgaaacttat ctgcgattag ggtgcttgct tgcaggatgg
     3361 tctgcgcggc ctccttgttg ctgagggttt cgatgttttt ccttgcgata tcgacctcca
     3421 gcagaccgag agcggtgaac acgaacgtga tcaccacgaa tgtcacgagg ccctgcagtc
     3481 gcccgccgat ctcttggact gcgcgaatca gccatcctgc gttgaaattc tcgactagga
     3541 agctcgtgac caggatgcca tgctcttcga gccagtcggt ccattgcagg tacagtgctt
     3601 gaaatcgcag cgcattgtcg atcacccagc gcccgaccgt gccgaacgac cacacgatga
     3661 ggtagccgag cacggctatg acgagaaggg tcaccaccaa ggtggcaaca agcgcaagca
     3721 gccgcgggac cctggtctcc agcgtacgtt gcagcggcca gacaatcgca atgacgaaga
     3781 gcgagaacgc gaccggcgca agaatcgagc gggcgaaata aagaccggca aagagcagca
     3841 ccgcggtgct gaggcctaac atggtcagcg cgcctcggtt gctcatgcag atcttaccct
     3901 attcgatcgt actccggctc acacgccttc gagcaactcg tccaggttga aggtggagcg
     3961 tcggccgaga tcgtcgccgt gagcactcag gaatgttgca ccagcgcgac ggccctcgtc
     4021 gcgcagcatg cacaggaatt cccactcggc gttgagtttg gaagagtagc cgagctcgac
     4081 catcatctcg ctcgtgatgc gatggatgcg catatccgcc cacctggcgc tctcgcagtt
     4141 ctccggctgg gtgacgtggc acagcagcgc gatcatgcgc agctctttca gcagcacggc
     4201 attgaacgag acctcgttga gccgattgag aatgtcgcgg gcggagcgcg gcaatgccgg
     4261 ccgctcgacc ggattgatct gaacaagaat cgtatccttc gaggtacatt cccgcaccag
     4321 cggcgtgatg gtcgggttgc cggaatagcc gccgtcccaa tagctttctc cctcgatctc
     4381 gatcgcttgg aacatggtgg ggaggcacgc cgacgcgagc agcacgtccg gcgtgatctc
     4441 gctgtttcgg aacacccgcc cgcgccccgt gcgcacgttc gtcgcggtga cgaagagctt
     4501 gatcgttgct cgcatcagcc gatcgaaatc gacgatttcg gtaaggatat cgcgcagcgg
     4561 atttgcgcgc gggcccatat cgtaaggaga gaacaagcgc gccatcaggt ccatggcgac
     4621 gaaggccggc gaatggtcga gcgtccagcg gcccagcaag acgtcgagcg gcgtgcgccg
     4681 cagcgggctg agcaacgccg cgcgcgatac gcgccgccaa aaattctcca gcgcggcgcg
     4741 ggcgccgtcg gcgcccttgt cggcatagcc gtcgaccagc accgcggcat tcatcgctcc
     4801 cgctgacgtg cccgaaatcc cgtcgatccg cagccacggc tcctcgagca ggcggtcgag
     4861 caccccccaa gtgaacgcgc cgtgggcgcc gccgccttgc agcgcgaagt ccaccagaat
     4921 gggggcgcgg gtcgtttcca cgatatccgt cgtcaccgta attgatcgtc aaggatggtc
     4981 ttcttacgtg acacggagat caagatagct cggcggaatt gctggtcgag gcatggcgag
     5041 cggacaattc ggctcggcaa gaaacgcaat acgggtgcgt gctgcggccg gtgaccgacc
     5101 cgcccgaatg ggctagaaga ggcacagccg cgatcgacaa cgctcgatct agaaactcta
     5161 ggaggagggc gccatggcca atagcttgcg accggtgacc gtcgccccca aagggatggg
     5221 actttacgat ttcgtcgccc atcaggaggg cttcttcgcc gccgaggggc tcgacgttga
     5281 attcgattgg aagaccttcc gcggcacgca gtcgagctgg aaggggctcg actatttcca
     5341 acgtccacag gaccagccct atacgcagga caagcgcgag gtgatccaag gcgcgtgcgt
     5401 ctggggcacg atctgcaatg ccagcgccgg catgggcaag atggtgcccg acgcctacgg
     5461 cgtttctccg tgggcgatct tcgtgcggcc gaactcgccc attcgccggc cggaggacct
     5521 caaggacgtg ccggtctcgg tcggcatgcg cgcgggaagc cacttcaacg tgccgtatcg
     5581 gctggagaaa tatcttccgc tcgaaaacat caaggtggtg aacacgggcg gtttcggcgc
     5641 gcggctcaag gcgctgctcg acggcgaggt tgaagcggcg agcctgctgc cgccgcagat
     5701 cgcgatggcc gagcagctcg gattgcgcca aatcatcgcc gataccttca agacgctttg
     5761 gtgggttccg gacaatttcg agccggacgc ggtgcgcagc tatctgcgcg cgctcgatgg
     5821 cgccgagaag gccatggacg acggtatggg aaaatatcta ccgctgtgga agctcgcggt
     5881 gccggccgaa ttcgagaact tccatccgtg ggactattcg aagttcggcc gtggcgagcg
     5941 gttctattac cggacgctgc cccgggagga attcgacgac actctggcgc aggtcaagcg
     6001 ctgggggctc gatcagtatc tcaaggatcg cagctacgag acgctgagct attcgcgctg
     6061 agttcgcgct ggttgcgctc tcgccgcggc gc
//
LOCUS       DATCWM010000390         2061 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_488828, whole genome shotgun sequence.
ACCESSION   DATCWM010000390 DATCWM010000000
VERSION     DATCWM010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2061
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_488828"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..427
                     /locus_tag="VIQ50_07530"
     CDS             <1..427
                     /locus_tag="VIQ50_07530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360266.1"
                     /translation="RKLAILLGGTTNLSLLPRPSRLEDLFLMRITKLSDLSVLGDLPC
                     LKTLRLDWMRNVTSLPNLAGLARLDYVTLDTMKGLADLSPLAAAPALRRLAIASMPQL
                     TVENFRCFIGHPRLEELWAYTGKSTVNEQVKRMFPLIAR"
     gene            554..1678
                     /locus_tag="VIQ50_07535"
     CDS             554..1678
                     /locus_tag="VIQ50_07535"
                     /inference="COORDINATES: protein motif:HMM:NF012471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M14-type cytosolic carboxypeptidase"
                     /protein_id="HEY9360267.1"
                     /translation="MRISSNFDSGNIECLDCSNPTDIRLAINKDRNADFYQWFHFRLV
                     GARGQDCALRIMNAGSAAYPKGWENYRACASYDRRDWFRVATAYDGTVLTINHRPEHD
                     SVYYAYFAPYSMERHARLVARTLVKPGVRLEVPGATLDGQDMDLLHVGEAGRGKPHCW
                     IIARQHPGETMAEWWMEGFIDRLLDPADTVAQELRERAVFHIVPNMNPDGSRRGHLRT
                     NAAGANLNREWAEPSMERSPEVFVIRKAMAETGVDFCLDVHGDETVPYNFLVKTVGIP
                     SLTPKQTALQRTYAEQLSRASADFQTEHGYPDNAPGKANLTMCGNYVAETFGCLSMTL
                     EMPFKDNDAAPDARAGWSPSRCRKFGMAGLDALRGVLGDL"
     gene            complement(1881..>2061)
                     /locus_tag="VIQ50_07540"
     CDS             complement(1881..>2061)
                     /locus_tag="VIQ50_07540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360268.1"
                     /translation="RGETGRSGQCKGKRAHRGQHDLSAMHLDHLYLPVRVVFEGLSSA
                     PGGAAYPLFFVVLCA"
BASE COUNT          392 a          676 c          640 g          353 t
ORIGIN      
        1 gcgcaagctc gctatcctgc ttggcggcac cacgaacctt tcgctgctcc cgcggccttc
       61 ccggttggaa gacctcttcc tcatgcggat caccaagctc tccgacctca gcgtgctcgg
      121 cgacctgccg tgcttgaaga cgctgcgcct ggactggatg cgcaacgtga cgtcgctccc
      181 gaatctcgcc ggtctggcgc ggcttgacta tgtcacgctc gacacgatga agggcctggc
      241 tgatctgtcg ccgctcgccg ccgccccggc actgcgccgc cttgccatcg ccagcatgcc
      301 gcagctcacg gtcgaaaact tccgctgctt catcggccat ccccggctcg aggagctctg
      361 ggcctacacc ggcaagagca ccgtgaacga gcaggtcaag cgtatgttcc cgctcatcgc
      421 gcggtagaaa actggcggca tagcattcag gcacggctcg ccaagcagcg cgtgacgcac
      481 gggcctagcg cggtgtaact ctaagcgggt cgcggggcgc gccccgagca aaacgccttc
      541 ggagtccccc tcaatgcgaa tcagcagcaa tttcgattcc gggaatatcg agtgtctcga
      601 ttgttcgaac ccaacggaca tccggctcgc tatcaacaag gaccgcaatg ccgacttcta
      661 tcagtggttt cacttccgcc tcgtcggggc gcgcggtcaa gattgcgcgc ttcggatcat
      721 gaatgccggg agcgccgcat atccgaaggg ctgggagaac tatcgcgcct gcgcttccta
      781 cgatcgccgg gactggttcc gcgtcgcgac cgcgtacgac gggacggtcc tgacgatcaa
      841 ccatcggccc gagcacgatt ccgtctacta cgcctatttt gcgccctact cgatggaacg
      901 acacgcgcgg ctcgtcgcga ggacgctcgt caagccgggc gtgcgactcg aagtcccggg
      961 cgccaccctc gacggacagg acatggacct cctgcatgtg ggcgaggccg gccgcggcaa
     1021 accgcactgc tggatcatcg cccgtcagca tcccggggag accatggcgg aatggtggat
     1081 ggaaggattc atcgaccggc tcctggaccc ggccgacacg gtggcgcagg aactgcggga
     1141 gcgggccgtc ttccacatcg tccccaacat gaatccggac ggcagccggc gcggccatct
     1201 gcgcaccaat gccgccggcg ccaacctcaa tcgcgaatgg gcagagccga gcatggagcg
     1261 cagcccggag gtcttcgtca ttcgcaaggc gatggctgag accggggtcg atttctgcct
     1321 cgacgtgcat ggcgacgaga cggtccccta caacttcctc gtcaagacgg tgggaattcc
     1381 ttcactcacg cccaagcaga cggcgctgca gcggacctat gcggagcagc tgtcgcgcgc
     1441 cagcgcggac ttccagaccg agcatggcta tcccgacaac gcgcccggca aggcgaacct
     1501 cacgatgtgc ggcaactacg tcgccgagac cttcggctgt ctctcgatga cgctggagat
     1561 gccgttcaag gacaacgacg ccgcaccgga cgcgcgggcc ggctggtccc cgtcgcgctg
     1621 ccggaaattc ggcatggccg gactcgacgc gctgcggggc gtgctgggcg atttataggg
     1681 attttcggtc ggcgggactg ctcgccgagg ctctccaaat aaaacgtgtt gcggacgcag
     1741 cagtaccggc actagatttg cctacttgtg gagtgcagcg aatcgtctaa agccgtcgct
     1801 gaggcgtaga agactgaact tcagatacgg atgatctggc atgcctgccg gcatgggagc
     1861 gtaactgcgg cggcgggcga tcacgcgcat aggaccacaa agaagagggg atacgcggcg
     1921 ccgccaggtg ccgaagataa cccttcgaac acaacgcgaa cagggagata cagatgatca
     1981 agatgcatcg ccgacaaatc atgctgtcca cggtgggcgc gtttgccctt gcactgtccg
     2041 cttcggccgg tttcaccccg g
//
LOCUS       DATCWM010000391         3471 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_408010, whole genome shotgun sequence.
ACCESSION   DATCWM010000391 DATCWM010000000
VERSION     DATCWM010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3471)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3471)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3471
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_408010"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..466
                     /gene="phnH"
                     /locus_tag="VIQ50_07545"
     CDS             <1..466
                     /gene="phnH"
                     /locus_tag="VIQ50_07545"
                     /inference="COORDINATES: protein motif:HMM:NF017645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0019634 - organic phosphonate metabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnH"
                     /protein_id="HEY9360269.1"
                     /translation="PMSAGAAAVALAMLDYETPVWLDAALAQDTQVADWIRLQTGARV
                     TTEPAEAAFAFFAEPEHARAFDAFAQGTPEYPDRSATLVLQVEDFGSGDGLVLSGPGV
                     ADARNFSARPLPSDFQARIAANRALFPRGVDVVLVSPAAVAALPRSVAAQRG"
     gene            469..1572
                     /locus_tag="VIQ50_07550"
     CDS             469..1572
                     /locus_tag="VIQ50_07550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-phosphorus lyase complex subunit PhnI"
                     /protein_id="HEY9360270.1"
                     /translation="MYVAVKGGERAIENAHALLADARRGDRSIAEISLDQISQQLALA
                     VDRVMAEGSLYDRELAALAIKQARGDLIEAIFLLRAFRTTCPRFGASVPFDTAGMDVR
                     RRVSAIFKDLPGGQVLGPTFDYTHRLLDQMLAGTTDVAEPASAVCDGAPMQPVTDLLA
                     RDGLIEGCAAGAPDAAVGDLTREPLSFPAQRDVRLQNLARGDEGFLLALGYSTQRGFG
                     RTHPFAGEIRCGEVEVEFFAEEVGFAVPLGSIALTECQMVNQFKGSASEAPRFTRGYG
                     LAFGQSERKAMSMALVDRALRARELGEEVGAPAQDEEFVLSHSDNVQATGFVEHLKLP
                     HYVDFQSELGLVRRMREEFALRDGAGALKDAAE"
     gene            1569..2462
                     /locus_tag="VIQ50_07555"
     CDS             1569..2462
                     /locus_tag="VIQ50_07555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009032229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate 5-phosphate
                     C-P-lyase PhnJ"
                     /protein_id="HEY9360271.1"
                     /translation="MNAPVYNFAYLDEQTKRMIRRAILKAIAIPGYQVPFASREMPMP
                     YGWGTGGVQVTAAILGPDDVLKVIDQGSDDTTNAVSIRKFFAKTAGVRTTTRTAEATV
                     IQTRHRIPETPLGEHQVLVYQVPIPEPLRFLEPRETETRQMHALADYGVMHVKLYEDI
                     ARHGHIATTYAYPVKVNARYVSDPSPTPKFDNPKMNNSPALQLFGAGREKRIYAIPPY
                     TAVVSLDFEDHPFERYRHDGSCALCASTESFLDEVVIDDAGGRMFVCSDTDYCEARRA
                     AAKAGGQSSPAGPASMGPPHA"
     gene            2455..2925
                     /locus_tag="VIQ50_07560"
     CDS             2455..2925
                     /locus_tag="VIQ50_07560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020093760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY9360272.1"
                     /translation="MLEPAKLRVRPATESDLEKILDLYAQTEFDAGDVLPLAAAKHVF
                     ERFADYPDYTLYVAEHGGEIVGTFALLVMHNLGHLGAPSAIVEDVAVAPTLQRHGIGK
                     AMMQFALGLCRDKGCYKLMLSSNAKRERAHAFYESLGFERHGFSFRLDFVRGAA"
     gene            2922..>3471
                     /locus_tag="VIQ50_07565"
     CDS             2922..>3471
                     /locus_tag="VIQ50_07565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY9360273.1"
                     /translation="MMEREEDQPLLRAEGLSKWYSNQLGCRDVSFAVHPGEVMAVVGE
                     SGSGKTTLLRLLSTQLAPSAGRVFYRMRDGTTRDLVSLGEAERRFLFRTDWGYVHQDP
                     AMGLRMTVSAGANVGERLMAIGWRHYGGIRRAAGDWLSRVEIDAGRIDEAPDTYSGGM
                     RQRLQIARNLVTRPRLVFMDEPT"
BASE COUNT          565 a         1160 c         1158 g          588 t
ORIGIN      
        1 gcccatgagc gccggcgccg ctgccgtggc gctggcgatg ctcgattatg aaacgccggt
       61 gtggctcgac gctgcgctcg cacaagacac acaggtcgcc gattggatcc ggctgcagac
      121 cggcgcacgg gtaaccaccg agcccgcaga ggcggcgttc gccttcttcg ccgaacccga
      181 acatgcgcgg gccttcgatg cgttcgcgca gggaacaccc gaataccccg atcgctcggc
      241 gacgctcgtg ctgcaggtcg aggatttcgg cagcggggac ggcctggtgc tctcgggccc
      301 cggcgtcgcc gatgcgcgca acttttcggc gcggccgttg ccgagcgatt tccaagcgcg
      361 catcgccgcc aaccgcgcgc tgttcccgcg cggcgtcgat gtggtccttg tttcccccgc
      421 ggccgtcgcg gcgttgccgc gctcggtcgc agcgcagcgg ggctgacgat gtacgttgcg
      481 gtcaaaggcg gcgagcgcgc aatcgagaac gcccacgcgc tgctcgccga cgcgagacgg
      541 ggcgatcgct cgatcgcaga gatttcgctc gaccagatat cgcagcagct tgcgctggcc
      601 gtcgaccgcg tgatggccga gggatcgctt tacgaccgcg agctggcggc gctcgccatc
      661 aagcaggcgc gcggagacct gatcgaagcg atctttctcc tgcgcgcctt tcgcacgaca
      721 tgtccgcgct tcggcgcgtc cgtcccgttc gatactgccg gcatggacgt tcgccgccgc
      781 gtctccgcca ttttcaagga tctgcccggc gggcaggtgc tcgggcccac cttcgactat
      841 acgcaccggc tgctcgatca gatgcttgcc ggcacgacgg acgtcgccga accggcgagc
      901 gcggtctgcg atggggctcc gatgcaaccg gtaaccgatc tgctcgcgcg cgacgggctc
      961 atcgaaggct gcgcggcggg cgcacccgac gcggcagtgg gcgatttgac gcgcgagccg
     1021 ctctcgtttc ccgcgcagcg agacgtgcgg ctgcagaatc ttgcgcgcgg cgacgaaggt
     1081 ttcttgcttg cgctgggcta ctcgacgcag cgcggtttcg gccgcacgca tccgttcgcc
     1141 ggcgagatcc gctgcggcga ggtggaggtc gagttcttcg cggaggaggt cggcttcgca
     1201 gtcccgctgg gcagcatcgc gttgaccgaa tgtcagatgg tcaaccagtt caaaggctcg
     1261 gccagcgagg cgccgcgctt cacccgcggt tacggtctcg ctttcgggca gagcgagcgc
     1321 aaagcgatgt ccatggcgct ggtcgaccgc gccttgcgcg cgcgcgagct cggggaagag
     1381 gtcggcgcgc cggcgcaaga cgaggaattc gtcctctcgc attcggacaa cgtacaggcc
     1441 accggattcg tcgagcactt gaagctgccg cattacgtgg atttccagtc cgagctcgga
     1501 ttggtgcggc ggatgcgcga ggagtttgcg ctgcgggacg gcgccggcgc gctgaaggat
     1561 gcggctgaat gaacgcaccg gtctacaact tcgcctacct cgacgagcag accaagcgga
     1621 tgatccgccg cgccattctc aaggcgatcg cgatccccgg ctaccaggtc ccctttgcca
     1681 gccgcgagat gccgatgccg tacggctggg gcaccggcgg ggttcaggtc accgcggcga
     1741 tcctcggccc cgacgacgtg ttgaaggtga tcgaccaagg ctccgacgac accaccaacg
     1801 cggtgtcgat ccgcaagttt tttgctaaga ccgcgggcgt tcgcaccacc acgcgcaccg
     1861 ccgaggcgac ggtgatccag acgcggcacc ggattcccga aacgccgctc ggcgagcatc
     1921 aagtcctggt ctaccaggtt cccattccgg agccgctgcg ctttctcgag ccgcgcgaga
     1981 cggaaacccg gcaaatgcac gcactggccg attacggcgt gatgcatgtc aaactgtatg
     2041 aagacatcgc ccgccacggc cacatcgcca ccacctacgc ctatccggtg aaggtgaacg
     2101 ccagatacgt gagcgaccct tcgccgacgc cgaaattcga caatccgaaa atgaacaact
     2161 cgccggcgct gcagctgttc ggcgccggcc gcgagaagcg catttatgcc atcccgccct
     2221 acacggcggt cgtctcgctc gatttcgaag atcatccgtt cgagcggtat cgccacgacg
     2281 gcagctgcgc gctgtgcgcg tccacggaaa gcttcctcga tgaggtggtg atcgacgatg
     2341 cgggcgggcg gatgttcgtc tgctcggaca ccgattattg cgaagctcgc cgcgccgcgg
     2401 cgaaggcggg cgggcaatcc tcgcctgccg ggcccgcgag catggggccg ccgcatgctt
     2461 gagccggcaa aactgcgggt gcggccggca acggagtcgg acctggagaa aatcctcgat
     2521 ctctacgcgc aaaccgaatt cgacgcgggc gatgtgcttc cgctcgccgc cgccaagcat
     2581 gtattcgagc gcttcgccga ttatcccgac tacaccctct acgtcgccga gcatggcggc
     2641 gagatcgtgg gcacctttgc cctgctggtg atgcacaacc tcggccacct cggtgcgccg
     2701 tcggccatcg tcgaggatgt cgccgtggcg ccgacgctgc agcgccacgg catcggcaaa
     2761 gcgatgatgc agttcgcgct cgggctttgt cgcgacaagg gctgctacaa actgatgctg
     2821 tcctcgaacg ccaagcgcga acgcgcacac gcgttctacg aatcgctcgg attcgagcgc
     2881 cacggcttca gctttcgtct cgatttcgtg cgaggcgcgg catgatggag cgcgaggaag
     2941 atcaaccgct actgcgcgcc gaaggcctga gcaaatggta cagcaaccag ctcggctgcc
     3001 gcgacgtgtc gtttgccgtt catcccggcg aggtgatggc agtggtgggg gaatccgggt
     3061 ccggcaagac cacgctgttg cggcttctct cgacccagct cgcgccgtcg gccggccggg
     3121 tgttctaccg catgcgcgac gggacgacgc gcgatcttgt ctcgctcggc gaggcggagc
     3181 ggcgcttcct gtttcgcacc gactggggct acgtgcatca agatccagct atgggcctgc
     3241 gcatgacggt gtccgcgggc gccaatgtcg gcgagcggct gatggcgatc ggctggcgcc
     3301 actacggcgg catccgccgc gccgcgggcg attggctctc ccgcgtcgag atcgacgccg
     3361 ggcggatcga cgaggcgccg gacacttatt ccggcggcat gcgtcagcgg ttgcagatcg
     3421 cgcgcaacct cgtcacccgg ccgcgcctgg tgttcatgga cgagccgacc g
//
LOCUS       DATCWM010000392         2097 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_283692, whole genome shotgun sequence.
ACCESSION   DATCWM010000392 DATCWM010000000
VERSION     DATCWM010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2097
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_283692"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..848)
                     /locus_tag="VIQ50_07570"
     CDS             complement(<1..848)
                     /locus_tag="VIQ50_07570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015597859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEY9360274.1"
                     /translation="MSRPTIGIALGGGAARGWAHIGVLKTLVAAGLEPDIVAGTSIGA
                     VAGACYVTDRLTALEDFACTLTRRRIFGFLDINFAGSGLITGQRLNARLEQHLREFTI
                     EQLERKFIAVATELGTGHEVWLNKGSLVNALQASFALPGIFRPVQINGRWLIDGALVN
                     PIPVSVCRAHGARIVIAVNLSNDIFSKGAVIHDQGAFGDPLALAESVEGTELVGTNGR
                     AAVHLLHRQIFGRSNGAPGMSAVMMDAINITQDRIARSRLAGDPPDITIGPKLGDIGL
                     FDFHRA"
     gene            complement(961..1458)
                     /gene="hisI"
                     /locus_tag="VIQ50_07575"
     CDS             complement(961..1458)
                     /gene="hisI"
                     /locus_tag="VIQ50_07575"
                     /EC_number="3.5.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004635 - phosphoribosyl-AMP
                     cyclohydrolase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HEY9360275.1"
                     /translation="MSKAGITPPSKSQADIEEGTVFAPKFAADGLIPVVVTSAETGEV
                     LMFAYMNEEALVRTIETGEAHYWSRSRGGLWRKGKVSGNTQRVVEMRTDCDQDAIWLK
                     VEMTGAEASCHTGRRTCFYRAVPVGSAPGAGLALRFVETERRFDPDEVYGHAGAAKGT
                     LKSSE"
     gene            complement(1488..2069)
                     /gene="folE"
                     /locus_tag="VIQ50_07580"
     CDS             complement(1488..2069)
                     /gene="folE"
                     /locus_tag="VIQ50_07580"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006936574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_process: GO:0042559 - pteridine-containing compound
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HEY9360276.1"
                     /translation="MVRPSREEAEEAVRTLIAYAGDDPDREGLRETPRRVTSAYDEFF
                     AGYREEPLEVLSRTFDEVAGYDDIVMLRDIELHSHCEHHMIPFIGKAHVAYFPTDRVV
                     GISKLARVVEVFARRLQTQETMTAQIAETIDKALKPKGVGVMIEAVHQCMSIRGVKKP
                     DVATITTQFTGIFKDDPAQQARFMMLATERGRG"
BASE COUNT          383 a          657 c          662 g          395 t
ORIGIN      
        1 caagcgcggt gaaaatcgaa gagcccgatg tcgccgagtt ttggcccgat ggtgatatcg
       61 ggcgggtcgc cggcaagccg cgagcgtgcg atgcggtcct gagtgatgtt gattgcatcc
      121 atcatcaccg ccgacatgcc aggcgcgcca ttgctcctgc cgaaaatctg ccggtgcagc
      181 aggtgaaccg cggcgcgtcc gttggtgccg acgagctcgg tgccctcgac gctctcggcc
      241 aaggcgaggg gatcgccgaa agctccttgg tcatgaatga ctgcgccttt gctgaagatg
      301 tcgttgctga ggttgacggc gataacgata cgggcgccat gcgcgcggca caccgagacc
      361 gggatcgggt tgaccagggc cccgtcgatc agccagcgtc cgtttatctg cacggggcgg
      421 aagatgcctg gcagagcgaa cgatgcttgc agggcattca cgaggctgcc cttgttgagc
      481 cacacctcat ggccggtgcc gagttcggtg gcgacggcaa tgaatttccg ttctagctgc
      541 tcgatcgtga actcacgcag atgttgctcg agccgcgcgt tcaagcgctg accggtaatg
      601 aggcctgagc cggcgaaatt aatatccagg aaaccaaaaa tgcgcctgcg ggtgagggta
      661 caggcgaaat cttcgagcgc agtcagcctg tcggtgacgt agcaggcgcc ggcaaccgcg
      721 ccgattgacg ttcccgccac aatgtcaggt tcgagacctg cggcgaccag ggtcttcagt
      781 acgccgatat gagcccagcc gcgtgccgcg ccgccgccaa gtgcgatgcc gatcgtcggt
      841 ctactcatgc tgcaacgcgg gaaagctcat gccggaaagg tctgcgggct gacggccgca
      901 aacggccaca cttggctttc accggcttgg ccgaatgtga cgatctagcc gcggtcaata
      961 ctattccgaa ctctttaagg ttccctttgc ggcaccagca tgaccataga cctcatccgg
     1021 gtcgaatcgc cgctcagtct cgacaaagcg tagtgccaga ccggcacccg gtgcactgcc
     1081 cacgggaacc gcccgataga agcaggttct gcggccggtg tgacaactgg cctcggcgcc
     1141 ggtcatctcg actttcagcc agatcgcgtc ctggtcgcaa tccgtgcgca tctcgaccac
     1201 gcgctgggtg ttgccgctga ccttgccctt ccgccacaag ccgccgcgcg agcgggacca
     1261 gtaatgcgct tcgcccgtct cgatcgtacg gacgagggcc tcttcgttca tgtaagcaaa
     1321 catcagcacc tcgccggttt cggcggaggt aacgaccaca ggaatgagac cgtcagcggc
     1381 gaatttcggc gcgaagacgg tgccttcctc gatatcggcc tggctcttgg agggaggggt
     1441 gatgccagct ttgctcaccg cgatctacgt ccttcgcggc gcttcgctca gccgcgtcca
     1501 cgctcggtcg caagcatcat gaagcgcgct tgctgcgccg gatcgtcttt gaagatgccg
     1561 gtgaactgcg tggtgatggt tgcgacatcg ggtttcttca cgccgcggat cgacatgcac
     1621 tgatgcaccg cctcgatcat cacccccacg cctttcggct tgagcgcctt gtcgatggtc
     1681 tcggcgatct gggcagtcat ggtctcttgc gtctgaagcc gccgagcgaa cacctcgacc
     1741 acacgggcga gcttggagat gcccactacg cggtcggtcg ggaaataggc gacatgcgcc
     1801 ttgccgatga acgggatcat gtggtgctcg caatgcgagt ggagctcgat atcgcggagc
     1861 atcacaatgt cgtcataacc cgccacctcg tcgaaagtgc gtgatagcac ttcgagcggc
     1921 tcctcgcggt agcccgcgaa aaactcgtca taggcggagg tgacgcggcg gggcgtctcg
     1981 cgcagcccct cgcggtcggg atcgtcgccc gcataggcga tcaaggtgcg gacggcctcc
     2041 tcggcctcct cacgagaggg ccgcacgata ccggccccgc ggccggcctc ggcttgc
//
LOCUS       DATCWM010000393         4570 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_494328, whole genome shotgun sequence.
ACCESSION   DATCWM010000393 DATCWM010000000
VERSION     DATCWM010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4570
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_494328"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..913
                     /locus_tag="VIQ50_07585"
     CDS             <1..913
                     /locus_tag="VIQ50_07585"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY9360277.1"
                     /translation="LVYAFLPTQTTLATLLLPPRLKSKLVFGLRAGGVQLDQYDALNA
                     LTYRAEAWLSRRADLAIANARAVRADAIRRGFAADRIAIIMNGIDIDAMRMDAGAGRT
                     MRQAWGLSPDHFVIGCAARLDPMKDHANLLQAAASFARENSDARFVCVGDGPAGYRLR
                     LTSFADSLGLADRVLWVGRIDDMKAAYNAFDIATLSSAFGEGFPNTVGEAMACGVPVA
                     ATDIGDVRAIIGDLGEVVVPKNPELLCAAWRRLRQRLVREPGLRKEGREGIVANYGLD
                     TMVRRTEDILSQLTAGRRTQDIAREFA"
     gene            complement(930..1703)
                     /locus_tag="VIQ50_07590"
     CDS             complement(930..1703)
                     /locus_tag="VIQ50_07590"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY9360278.1"
                     /translation="MSLDHLDAIRAAELEKIASLFPAGARVLEIGAGTGKQALELQRR
                     GFEVSAIELADSNYAAHRVFPIKDYDGRSIPLPDASVDVVFSSNVLEHVPDLSRMHAE
                     IHRVLAPEGHCIHVVPTHTWRFWTTLTSYLEAISFFASSAPQLVPRAAPRAMEARRLR
                     DAWYRTARHTVGLCLPRRHGARGNVISELWLFHPRWWRRNFADNGFAVVAEGPVGLFY
                     TGEVLLGLRLGLAKRKRLARVLGSSCHYFKLESVLQAAA"
     gene            complement(1832..2653)
                     /locus_tag="VIQ50_07595"
     CDS             complement(1832..2653)
                     /locus_tag="VIQ50_07595"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY9360279.1"
                     /translation="MSSTQVQDRRFRFGDNWLDFARNLDAHQLTEAELSLRRLLQRDS
                     LAGLSFLDIGSGSGLFSLAARKLGARVHSFDFDQNSVLCTTRLRERYFGGDNEWTIEQ
                     GSVLDDEYVRGLGTFDVVYAWGVLHHTGAMHDALRAAARMVKPGGLLAFALYHRTMMC
                     GFWRWEKRWYSGASLEAQRRTRAVYVALLRAAFFVTRRDFQSHVANYHSVRGMDFVHD
                     VHDWMGGYPYESILEPEVDALMRPLGFARIYATGTPLTTGIFGSGCDEYLYRRLG"
     gene            2801..3838
                     /locus_tag="VIQ50_07600"
     CDS             2801..3838
                     /locus_tag="VIQ50_07600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase"
                     /protein_id="HEY9360280.1"
                     /translation="MTGQVTERLWVLGSIALIALILSLGLMVLLRPWLARYAMVQPNA
                     RSSHLRPTPQGGGIAVVVATLLVAAGAILVSPALLKTQGGQFLALTAATALLGLVGAM
                     DDMRSLPAAARLAMQCIAVGVVIAALPAELRAIPQLPWSIERAGLFLAGVWFVNLVNF
                     MDGIDWMTVAEVVPVTGAILALGLVGTVGALPAVVAAALLGAIAGFAPFNRPVAQVFL
                     GDVGSLPIGLLLGWLLLQLAATDHLAAALILPLYYLADATITLGRRLVRGEAVWLAHR
                     THFYQRATDHAFTVPQIVGRVFVVNLLLAGLALIAVAAHNVAMSLAMLGAGAAIILWL
                     LARFATGKPRS"
     gene            complement(3873..>4570)
                     /locus_tag="VIQ50_07605"
     CDS             complement(3873..>4570)
                     /locus_tag="VIQ50_07605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HEY9360281.1"
                     /translation="AAAGAAAMVMISTDKAIEPVSVLGASKRFAEMYCQALDNEFARR
                     SAGHERPMRLIAVRFGNVLASNGSVVPKFKAQIEAGGPLTVTHPEMVRYFMTIREACD
                     LVVTAASHALEQTQTDVAVYVLNMGQPVKIVDLAERLIRLSGLEPGRDIDITFTGIRP
                     GERLQEILFAREEPTAPIGIEGIVAAKPVSPSLDAMRGWLAALEQGLAREDRSVIFGV
                     LHDAVPDFSGEAA"
BASE COUNT          825 a         1468 c         1445 g          832 t
ORIGIN      
        1 tctggtctac gcctttctcc caacccagac cacgctcgcg acgctgctgc tgccgccgcg
       61 gctcaagagc aagctcgtgt tcgggctgcg tgcgggcggc gtgcaactcg atcaatatga
      121 cgcgctaaac gccctcacct accgtgctga agcctggctt tcccggcgcg ccgatctcgc
      181 gatcgccaac gcgcgtgcgg tgcgcgccga cgcgatccga cgtggatttg cggccgatcg
      241 tatcgccatc atcatgaatg gcatcgacat cgatgcgatg cggatggatg cgggtgcggg
      301 ccgcacgatg cgtcaagcat ggggcctctc ccccgatcat ttcgtcatcg gctgtgcggc
      361 ccggctcgat ccgatgaagg accatgcaaa cttgctccag gctgccgcga gctttgcgcg
      421 cgaaaattca gatgcgcgct tcgtatgtgt cggcgacggg ccggccggct atcggctgcg
      481 gctcacgtct ttcgccgatt cgctggggct tgcggaccga gtgctatggg tcggcaggat
      541 cgacgacatg aaagcggctt acaacgcctt cgacatcgcc accttgtcat cggctttcgg
      601 cgaaggcttc ccgaacacgg ttggcgaggc gatggcgtgc ggtgttcccg tcgccgccac
      661 ggatatcggc gacgtgcgcg cgatcatcgg cgacctcggc gaagtggtcg tgccgaaaaa
      721 tcccgagctg ctttgcgccg cgtggcggcg cctgcgccag cgcctcgtgc gagagccagg
      781 cctgcgcaag gaggggcgcg aaggaatcgt cgcaaattac ggtctcgata caatggtgcg
      841 caggaccgag gacattctca gtcagctcac ggccgggcgg cggacgcaag acatcgcccg
      901 cgagtttgcg tgagcggatt aatcgacctt cacgcggcgg cttgcaacac cgattcaagc
      961 ttgaagtagt ggcaggagct gccgagcacg cgcgccaagc gcttacgctt ggcgagcccc
     1021 aggcgcagcc ccaacaggac ctcgccggtg tagaacaggc caacaggtcc ttcggcgacg
     1081 acggcaaagc cgttgtccgc gaaattccgc cgccaccagc gggggtggaa caaccacaac
     1141 tcggagatga cgtttccgcg tgccccgtgc cgtcgcggaa ggcagagccc gactgtgtgc
     1201 cgcgcggtgc ggtaccacgc atcgcgcaat cgccgcgcct ccatcgcccg tggcgccgcg
     1261 cgcggcacga gttgcggcgc cgacgacgca aagaacgaga tcgcctcgag ataggatgtc
     1321 agcgtggtcc aaaaccgcca cgtgtgcgtc ggcacgacgt gaatgcaatg gccctctggc
     1381 gcaagcacgc gatggatttc ggcgtgcatg cgcgaaagat ccggtacgtg ctcgaggacg
     1441 ttcgacgaga atacgacgtc aacgctggca tcgggcaaag ggatcgaccg gccgtcgtaa
     1501 tccttgatcg gaaaaacccg atgcgcggca tagttcgaat ccgcgagctc gatcgcgctg
     1561 acctcgaacc cgcgtcgttg cagttccagc gcttgcttac cggtaccggc cccgatctcg
     1621 agaacacgcg cgccagctgg aaacaacgac gcgatcttct ccaattccgc cgctctaatc
     1681 gcgtcgaggt gatcaaggga caacacagcg atacaaacga cctgattggc ggcgcatggg
     1741 ggtggcactg tagccgagca ccccgggcac ggccaagcac gcacgcggat ccccgatcga
     1801 ccgcaaccga cattcatcgg gtctgctgct ttcagccgag tcgacgatac aggtactcat
     1861 cgcaaccgga tccgaagatg cccgtcgtca aaggggtgcc ggtggcatag atgcgtgcaa
     1921 atccgagcgg tcgcatcaat gcgtccactt ccggctcgag aatcgactcg taaggatagc
     1981 cgcccatcca gtcgtgcacg tcatgcacga agtccattcc tcgaacgctg tgatagttgg
     2041 cgacatgcga ctgaaagtcg cgacgggtta caaaaaaggc tgcccgcaaa agtgcgacat
     2101 agacggcacg cgtgcgccgc tgcgcttcca acgaggcgcc gctgtaccag cgtttttccc
     2161 atcgccagaa cccgcacatc atggtgcgat ggtagagtgc gaaggctaac aggccgcccg
     2221 gtttcaccat acgagcggcg gcgcgcaatg catcgtgcat ggctccggtg tgatgcagca
     2281 ctccccaagc gtaaaccacg tcgaatgtgc cgagaccgcg cacatattcg tcgtccagaa
     2341 ccgatccttg ctcgatcgtc cattcattgt cgccgccgaa gtagcgctcg cgcaatcgcg
     2401 tagtgcacag tacggaattc tgatcgaaat cgaacgaatg cacgcgcgcg ccgagcttgc
     2461 gagctgcgag cgaaaacagc ccgctccccg aaccaatgtc gagaaagctc agtccggcaa
     2521 ggctatcgcg ttgcagcagc cgtcgaaggg aaagttccgc ttcggtaagc tgatgcgcgt
     2581 cgagattgcg agcaaagtcg agccagttgt cgccaaaccg gaagcggcga tcctgaacct
     2641 gggtactgga catgctgacc gctcccgcgc ctgcgcgaga agatagcggg tcaggccacg
     2701 cgctggcaaa tgcaacggcc ggaactcgcg tagccttgac gtgcgctctt gaccggaatg
     2761 ctatcgtgtc cttcgtcgga tcgggccgaa cagccaaaca atgaccggac aagtcactga
     2821 gcgtctgtgg gtcctcggat cgatcgcgct tatcgcgctg atcttgagtc tcgggctgat
     2881 ggtgctgctg cggccttggc tggcgcgcta tgcgatggtg cagccaaacg cccgttcctc
     2941 gcatctgcgc ccaacgccgc aagggggcgg catcgcggtg gtggtcgcga cactgctggt
     3001 cgctgcgggc gccatcttgg tgtcgcccgc actcctgaag acccaaggcg gccaattcct
     3061 ggcgctgacc gcggcaaccg cgctgcttgg attggtcggc gccatggacg acatgcgctc
     3121 cttgccggct gcggcgcggc tcgccatgca atgcatcgcc gtcggcgtcg tgatcgccgc
     3181 gctaccggct gagttgcgag ccatcccgca actgccctgg tcgatcgaac gcgccggcct
     3241 ttttctcgcc ggcgtatggt tcgtcaacct cgtcaatttc atggacggga tcgactggat
     3301 gaccgtcgcg gaagtcgtgc cggtgaccgg cgcgatcctg gcgcttggcc ttgtcggtac
     3361 ggtcggagca ttgcccgctg tcgtggcggc cgccttgctt ggcgcgatcg ccggtttcgc
     3421 gccgttcaac cggccggtgg cacaggtctt tctcggcgac gtgggcagct taccgatcgg
     3481 gcttctgctc ggctggctct tgctgcagct tgccgcaacg gatcatctcg cggcggcact
     3541 catcttgccg ctctattatc tcgccgacgc caccatcacg cttggccggc gcctcgtccg
     3601 gggcgaagca gtatggctgg cccatcgcac gcatttctac cagcgcgcca cagaccacgc
     3661 gtttaccgtg ccgcagatcg tcggccgtgt gttcgtggtc aatctgctgc tcgccggcct
     3721 cgcgttgatc gccgtcgcgg cgcataacgt cgccatgtcg ttggcgatgc tgggcgcggg
     3781 tgccgcaatc atcttatggc tgctggccag gtttgcgacg ggcaagcccc gcagctaaca
     3841 gaagtttggc gttgccaacc ggttgtggcg gatcacgccg cttcgccgct gaaatccggt
     3901 accgcgtcat gcagcacgcc gaagatcacc gagcgatctt cgcgcgcgag accttgctcg
     3961 agtgccgcca accagccccg cattgcgtca agcgagggac tgactggctt ggcggcgacg
     4021 atgccctcga tgccgattgg cgcggtcggc tcctcgcgcg cgaacaggat ttcctgcagg
     4081 cgctcgcccg gtctgatgcc ggtgaatgtg atgtcgatgt cgcggccggg ttcgagcccg
     4141 gagagccgga tcaaccgctc ggcgagatca acgatcttca ccggttggcc catattgaga
     4201 acgtagaccg ccacgtcagt ctgcgtctgt tcgagggcgt gacttgccgc cgtgaccacg
     4261 agatcgcacg cttcgcggat ggtcatgaag taccggacca tctccggatg cgtcaccgta
     4321 agcgggccgc ccgcttcgat ctgtgccttg aatttcggga cgacggaccc attcgacgcg
     4381 agcacattgc caaagcgtac ggcgatcagt cgcatggggc gctcgtgtcc ggcactgcgg
     4441 cgcgcgaact cattgtcgag cgcctggcaa tacatttcgg caaagcgctt cgaggcgccg
     4501 agaacggaca cgggctcgat cgccttgtcg gtcgagatca tcaccatggc ggcggcgccc
     4561 gccgcggcgg
//
LOCUS       DATCWM010000394         2356 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_477950, whole genome shotgun sequence.
ACCESSION   DATCWM010000394 DATCWM010000000
VERSION     DATCWM010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2356
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_477950"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..296
                     /locus_tag="VIQ50_07610"
     CDS             <1..296
                     /locus_tag="VIQ50_07610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008143833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DHHA1 domain-containing protein"
                     /protein_id="HEY9360282.1"
                     /translation="GIDLKDLRSLADEGKKRLGSGVVAIVGVTEEGKAGVVVGVTPDL
                     TGRFSAIDLARKGAEALGGKGGGGRADMAQAGGPDGSKAEAALKAIEGALAGS"
     gene            complement(406..900)
                     /locus_tag="VIQ50_07615"
     CDS             complement(406..900)
                     /locus_tag="VIQ50_07615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008143840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3455 domain-containing protein"
                     /protein_id="HEY9360283.1"
                     /translation="MRISIFLLAIIFAAAHPNAALAQVPPALAAPGESAVVTLHAEGA
                     QVYECKPGNDGKLAWAFREPIATLLLDGKTVGRHYAGPNWEHVDGSAVTAKAVANAPG
                     QSAGDIPWLKLEVTGHRGSFAGITTVQRINTQGGVHAGACDQAGALYSAPYAADYVFL
                     RKGS"
     gene            complement(930..2141)
                     /locus_tag="VIQ50_07620"
     CDS             complement(930..2141)
                     /locus_tag="VIQ50_07620"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006102 - isocitrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HEY9360284.1"
                     /translation="MAKIAVKNPVVEMDGDEMTRIIWHLIKEKLIHPYLDVELLYYDL
                     GMQKRDETRDRITVEAAEAVKKIGVGVKCATITPDEARVKEFGLKEMYRSPNGTIRNI
                     LGGVIFREPILCKNVPRLVPGWTKPIIIGRHAYGDQYRATDFRVPGKGKLSLSFVGDD
                     GTKIEREVFRFPGSGVTMAMYNLDDSIRDFARASFNYGLNRNYPVYLSTKNTIVKVYD
                     GRFKDIFQEIYDAEFKAEFEKKGIFYEHRLIDDMVAAALKWSGGYVWACKNYDGDVQS
                     DTVAQGYGSLGLMTSVLMTPDGKVVEAEAAHGTVTRHYRQHQKGEQTSTNSVASIFAW
                     TRGLAHRAKLDQDAKLAKFAATLEQVTVATVESGFMTKDLALLVGADQKWLSTTGFLD
                     KVDENLKRAMA"
BASE COUNT          371 a          749 c          789 g          447 t
ORIGIN      
        1 agggcatcga tctcaaggac ctgcgcagcc tcgccgacga aggcaagaag cggctcggct
       61 cgggcgtcgt cgccatcgtc ggcgtcaccg aggagggcaa ggccggcgtc gtggtcggcg
      121 tcacacccga cttgaccggc cgcttctctg ccatcgacct ggcgcgcaaa ggggccgaag
      181 cgctcggcgg caaaggcggc ggggggcggg cggacatggc gcaggccggc gggcccgacg
      241 gctccaaagc ggaggcggcg ctcaaagcga tcgaaggcgc gctcgccggt tcgtagccgc
      301 gccgccgcgc gtcacgattc tttattcaga gtgtagggtg ggcaaaatcg cgcacgcgcc
      361 gtgcccacct cacaatgttc gcagacgatt ttgcccaccc aactctcacg atcccttgcg
      421 caggaacacg tagtccgccg cgtagggcgc gctgtagagc gcgccggctt ggtcgcaggc
      481 gccggcgtgg acgccgccct gggtgttgat gcgctgcacc gtcgtgatgc ctgcgaagct
      541 gccgcgatgc cccgtcacct cgagcttgag ccagggaatg tcgccggcgc tctggcccgg
      601 tgcattcgca accgcctttg ccgtcaccgc gctgccgtcg acgtgctccc agttgggccc
      661 ggcatagtgg cgtccgacgg ttttgccgtc gagcagcaag gttgcgatcg gttcgcggaa
      721 cgcccacgcg agcttgccgt catttccggg cttgcactcg tagacctgcg cgccctcggc
      781 gtgaagcgta acgaccgcgc tctcgccggg cgccgcaagc gccggcggga cctgcgccaa
      841 tgcggcgttc gggtgtgccg cggcgaaaat gatggcgagg agaaatatcg atatgcgcat
      901 ggatgtgctc ctccttcgcg gcggcgcgat tacgccatcg cccgcttgag gttctcgtcg
      961 accttgtcga ggaagccggt ggtggagagc catttctgat cggcgcccac cagcagcgcg
     1021 aggtccttgg tcatgaaacc cgactcgacc gtcgctacgg tcacctgctc caaggtggcg
     1081 gcgaacttcg cgagcttggc gtcctggtcg agcttggcgc gatgggcgag cccgcgcgtc
     1141 caggcgaaga tcgaggcgac ggaattggtg gaggtctgct cgcctttctg gtgctggcgg
     1201 tagtgtcgcg tcaccgtgcc gtgcgccgcc tccgcttcga ccaccttgcc gtccggcgtc
     1261 atcagcaccg atgtcatcag cccgagcgag ccgtagccct gcgccacggt gtcggattgc
     1321 acgtcgccgt cgtaattctt gcaggcccag acgtagccgc ccgaccattt cagcgccgcc
     1381 gccaccatgt cgtcgatcag tcggtgctcg tagaaaatgc ccttcttctc gaactcggcc
     1441 ttgaactcgg cgtcgtagat ctcctggaag atgtccttga agcgcccgtc gtagactttg
     1501 acgatggtgt tcttggtcga gagatagacc gggtagttgc ggttgaggcc gtagttgaac
     1561 gaggcgcggg caaagtcgcg gatcgagtcg tcgagattgt acatcgccat ggtgaccccg
     1621 ctgccgggga agcggaacac ctcgcgctcg atcttggtgc cgtcatcgcc cacgaacgag
     1681 agcgacagct tgcccttgcc gggcacgcgg aaatcggtgg cgcgatactg gtcgccgtag
     1741 gcgtggcggc cgatgatgat cggcttggtc cagcctggca ccagccgcgg cacattcttg
     1801 cagaggatgg gctcgcggaa gatgacgccg ccgagaatgt tgcggatcgt gccgttgggc
     1861 gagcggtaca tctccttgag gccgaattcc ttcacccgcg cctcgtcggg ggtgatggtg
     1921 gcgcatttga cgccgacgcc gattttcttc accgcctccg ccgcctcgac ggtgatgcgg
     1981 tcgcgcgtct cgtcgcgctt ctgcatgccg aggtcgtaat agaggagctc aacgtcgagg
     2041 tagggatgga tcagcttctc cttgatgaga tgccagatga tgcgggtcat ctcgtcgccg
     2101 tccatctcga cgaccggatt cttcactgcg atcttcgcca tggcaaccgg gcccttgcct
     2161 atatttttgc gcgcgcgggt gtatgcagaa cgagggcgga gtgccctcgg gcaggcgcct
     2221 tatggcgcgc cccgccgcct gctgcaaggc taaaacacga gcggaatttg cgtgcgtgga
     2281 tggatcaatg tttttcgcgc gcacccaacg ccgtcacggc cgggcttgtc accgcaagtc
     2341 gggttcaccc gacttg
//
LOCUS       DATCWM010000395         2999 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_516019, whole genome shotgun sequence.
ACCESSION   DATCWM010000395 DATCWM010000000
VERSION     DATCWM010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2999)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2999)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2999
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_516019"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1632
                     /locus_tag="VIQ50_07625"
     CDS             <1..1632
                     /locus_tag="VIQ50_07625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY9360285.1"
                     /translation="FGYKGILLPEEICLGWLAMQCSHPVRWIEDRREHLIAGANCREH
                     HYRITAYAERDGRLRGIDCEAAVDSGAYSSYPFSACLEAAQVASILPGPYDFPAYRCR
                     TFSIATNKCPILPYRGVARTGVCFALELVLDAVAREAGIEPHEVRRKNLVRPEQMPFN
                     NITNKHFDSGDYPQSLNRAVAAIDVAGVRARQKRAEADRRLVGVGLATYCEQGAHGTS
                     VYYGWGIPMVPGFEQATARLTPDGGLELRVGLHSHGQGLETTLAQVAHEILGIDIGKI
                     KIVLGDTALTPYSTGTWGSRSMVMGGGAVAAASREIAKRAARIGARLLQSDPAQVSVR
                     DGQAVGPGGAISLREIARAWYLRPQDLPDDVDPGGLETTTGYKPARDTGTFSYATHAA
                     MVAVDPETGDVEILRYVIVEDGGKLVNPMIVDGQIYGGFAQGVGTALYEEMPFDRSGQ
                     PLASTLADYLLPSAIEVPAPVLVHMETPAPYTEFGVKGIGEGGAIAPPAAITNAINDA
                     LRPLGVELLVSPITPQRIIKAIAEQARSQSMARID"
     gene            1686..2960
                     /locus_tag="VIQ50_07630"
     CDS             1686..2960
                     /locus_tag="VIQ50_07630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ArgE/DapE family deacylase"
                     /protein_id="HEY9360286.1"
                     /translation="MSTSVAQTLLQKIDGSRDKAISFLRQMIAIPSVTGDEAKIQKFL
                     ADYMGKIGLDVDMWETDWEALKKHPGYRPVERGYEGRPNIVATLKGTGGGRSLLLNGH
                     TDVIPVGGGEGWSDDPWSATIKNGRIYGRGSADMKSGVASHIMAVESLLAAGLKTKGD
                     VYINVVIDEEVSGHGTLDTVIRGYKADAGISGETSDLAVQPACIGRIWFEIEIHGKPA
                     GIQKRYEGISGIDLGNKIVKAVADLEAKRVATVTHPLYPNALDTLPCIIGSFSAGNYP
                     SAFPVNCLLKGSIGTVPGEDHEGVKRSLVEQVARAAAEDPWMKHNPPKVRFVGYDAEA
                     SEIPRRHPIVETVSRNYKAVAGRDPEISGRQGAADTRFLNRYADTPTVIFGPGSTAVM
                     HANDEYVSIDDYMTAIKVVALSICDWCGVDGR"
BASE COUNT          562 a          974 c          983 g          480 t
ORIGIN      
        1 ttcggctaca aaggcatcct attgccggag gagatctgtc tcggctggct cgccatgcag
       61 tgctcccacc cggtgcgctg gatcgaggac cggcgcgaac atctcattgc cggcgccaat
      121 tgccgcgagc accattaccg catcaccgct tacgccgagc gcgacggccg cctgcgcggc
      181 atcgactgcg aagcagcggt cgattccggc gcctattcgt cctacccgtt ctcggcctgt
      241 ctggaggccg cgcaagtggc gagcatcctc ccggggccct acgattttcc cgcctaccgc
      301 tgccgcacct tctcgatcgc caccaacaaa tgcccaatcc tgccgtatcg cggcgtcgcc
      361 cgcaccgggg tgtgcttcgc gctcgagctc gtgctcgacg cggtggcgcg cgaagccggc
      421 atcgagccgc acgaggtgcg aaggaaaaat ctcgtgcgcc ccgagcagat gccgttcaac
      481 aacatcacca acaagcattt cgacagcggc gattatccgc agtcgctcaa ccgcgcggtg
      541 gcggcgatcg acgtcgcggg cgtgcgagcg cggcagaaac gcgccgaggc ggaccgccgc
      601 ttggtcggcg tcggccttgc gacctattgc gagcagggcg cgcacggcac ctcggtttac
      661 tacggctggg gcatcccgat ggtgccgggc tttgagcaag cgaccgcgcg gctgacgccc
      721 gacggcggcc tcgaactgcg cgtcgggctg cactctcatg gacagggcct cgaaaccacc
      781 ctggcgcagg tcgcccatga gatccttggt atcgacatcg gcaagatcaa aatcgtgctc
      841 ggcgacaccg cgctgacgcc gtattcgacc ggcacctggg gctcgcgctc gatggtgatg
      901 ggcggcggcg ccgtggcggc cgcatcccga gaaatcgcca aacgtgcggc gaggatcggc
      961 gcgcggctcc tgcagagcga tcccgcgcaa gtctcggtgc gcgacggcca ggcggtcggg
     1021 ccgggcggcg cgatcagctt gagggagatc gcgcgcgcct ggtacctacg gccgcaagac
     1081 ctgcccgacg atgttgatcc cggcggtctg gagaccacga ccggctacaa gccggcgcgg
     1141 gacaccggca ccttcagcta tgccacgcac gccgccatgg tggccgtcga cccggaaacg
     1201 ggagacgtgg aaatcctccg ctatgtcatc gtcgaggacg gcggcaagct ggtgaatccg
     1261 atgatcgtcg acggacaaat ctacggcggg ttcgcgcaag gggtgggcac cgcgctttac
     1321 gaggagatgc cgttcgatcg ctcgggacag ccgctcgcct cgaccttggc ggactatctt
     1381 ctccccagcg cgatcgaggt ccccgcgccg gtgcttgtgc atatggagac gccggcgccg
     1441 tacacggagt tcggcgtcaa agggatcggc gaaggtggcg cgatcgcgcc gcccgcggcg
     1501 atcaccaacg cgatcaacga cgcgttgcgg ccgctcggcg tcgaattgct ggtgtcgccg
     1561 atcacgccgc agcgcatcat caaagccatc gcggagcagg cccgctcgca aagcatggcg
     1621 cggattgact gaggccgaaa tcgccgctta atgagcctgc gcggccggat tttcggggat
     1681 cgcccatgag cacgagtgtc gcccagacgc ttctacaaaa aatcgacggc agccgcgaca
     1741 aagcaatctc gtttctgcgg cagatgatcg ctatccccag cgtcactggg gacgaggcga
     1801 agatccagaa gttcctcgcg gactacatgg gcaagatcgg cctcgacgtc gatatgtggg
     1861 aaacggattg ggaagcgctg aagaagcatc ctggctaccg gccggtcgag cgcggctacg
     1921 aaggacgacc taacatcgtc gccaccttga agggcaccgg cggcggacgc tcgttgctgc
     1981 tgaatgggca taccgatgtc atcccggtcg gcggcggcga gggatggagc gacgatccat
     2041 ggtctgccac catcaagaac ggccgcatct atgggcgagg ctccgccgac atgaaaagcg
     2101 gcgtcgccag ccacatcatg gcggtggaat ccttgctcgc cgccggtctc aaaaccaaag
     2161 gcgacgttta catcaatgtc gtgatcgacg aggaggtcag cggccacggc acgctggata
     2221 cggtgatccg cggctacaag gccgacgccg gcatttccgg cgagaccagc gatctcgcgg
     2281 tccagccggc ctgcatcggc cgcatctggt tcgagatcga gattcacggc aagcctgccg
     2341 ggattcaaaa gcgctacgag ggcatcagcg gaatcgacct cggcaacaag atcgtcaagg
     2401 cggtcgccga ccttgaggcc aagcgcgtcg cgaccgtgac ccacccgctc tacccgaacg
     2461 cgcttgatac gcttccctgc atcatcggca gcttctcggc cggcaactat ccgagcgcgt
     2521 ttccggtcaa ttgcctgctc aagggcagca tcggcacggt gcccggcgag gaccacgagg
     2581 gcgtcaagcg cagcctcgtc gagcaagtgg cgcgggcggc ggccgaggat ccttggatga
     2641 agcacaaccc gcccaaggtg cggttcgtag gctatgacgc cgaggcctcg gagattccga
     2701 ggcgtcaccc catcgtggaa acggtcagcc gaaactacaa agcggtggcc ggccgcgatc
     2761 ccgagatcag cggccgccag ggggcggcgg atacgcgctt cctcaatcgt tacgccgata
     2821 ctccgaccgt tatcttcgga ccgggctcga ccgcggtgat gcatgccaac gacgagtacg
     2881 tgtcgatcga cgattatatg accgcgatca aggtcgtggc attgagcatc tgcgactggt
     2941 gcggcgtcga tggtcgatag ggcatgatcg tgcggatgga atccgtgcgc ggcgaactc
//
LOCUS       DATCWM010000396         2169 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_321458, whole genome shotgun sequence.
ACCESSION   DATCWM010000396 DATCWM010000000
VERSION     DATCWM010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2169
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_321458"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..330)
                     /locus_tag="VIQ50_07635"
     CDS             complement(<1..330)
                     /locus_tag="VIQ50_07635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360287.1"
                     /translation="MFGSLARLVLVIASFVLVVPITSAHDSWISRGGHRNAAGEWCCG
                     TGDCFVVPKERVIMTGEGYVIIQGPLAGMGPVQHEAIPFSEAQPSPDGEFWRCRRPDG
                     SRRCFFAP"
     gene            655..1422
                     /gene="modA"
                     /locus_tag="VIQ50_07640"
     CDS             655..1422
                     /gene="modA"
                     /locus_tag="VIQ50_07640"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_function: GO:0030973 - molybdate ion binding [Evidence
                     IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEY9360288.1"
                     /translation="MRTMLVGIAMVLIGAGAARPAAAAEIKVLTAGAFKQVLLALVPD
                     FERTSGNKVIVDNDTVGALTKRIEGGETFDLAVLTPAAVDALASKGKLVAGSRANLAR
                     VGVGVVVKEGAAKPDIGSVDAFKRALLAAKSVAHIDPAAGGSSGIYVAGLLDKLGIAA
                     EIKPKAKLIPGGAVAEHVARGEAELGIHQISEILPVKGVTLVGPLPAEIQNDTVYAAG
                     LGAQAKESDAAKALIKALTGPAAAEVLKSKGMEPAGS"
     gene            1520..>2169
                     /locus_tag="VIQ50_07645"
     CDS             1520..>2169
                     /locus_tag="VIQ50_07645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012384307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018784 - (S)-2-haloacid dehalogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006805 - xenobiotic metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="haloacid dehalogenase type II"
                     /protein_id="HEY9360289.1"
                     /translation="MSVKALFFDVFGTLVDFRTGVAREAESILGPTGPKLDWGAFADA
                     WRKEYQPALEEVRAGRMAFRKLDLLHRENLDRILPRFGISGLAEGSARNLNLAWHRLP
                     AWPDVPGGLARLKRHFLLAPLSNGNISLMVDLARRNNFPWDAILGAETAGDYKPKPRV
                     YLAACEAFDLPPAECMMVAAHTNDLLAAAKCGLRTAHIARPGEHGPGTGETAPKAPV"
BASE COUNT          399 a          688 c          733 g          349 t
ORIGIN      
        1 cggcgcgaag aagcagcggc gtgagccgtc cgggcgcctg cagcgccaga actcgccgtc
       61 gggggaaggt tgcgcttcgg agaacgggat cgcttcgtgc tgcacgggac ccatgccggc
      121 gagcgggccc tgaataatga catagccttc gccggtcatg atgacgcgct ctttcggcac
      181 gacgaagcag tcgcccgtgc cacaacacca ttcgccggcg gcgttgcggt ggccgccgcg
      241 ggaaatccag ctgtcatggg ccgaggtaat gggaacgaca agaacgaagc tagcaatcac
      301 aagcacgagc cgtgcaaggc ttccgaacat gagtccgtcc ctttcgttat tccggcccgg
      361 ccactcttca aatgacgcgc actctccttg gttcccggat ggcgccggtt gcagacgcga
      421 actgcgcacg cggcattgtg gataactgcg cctcaaagtc gggtctgcga ctctggaggc
      481 gaatcaaccc tttgatttag aagtataaac acaaaacggt cgtaaaagcg atctcgcgat
      541 attgcattgc accattgcgc ccggaaatgg ccgcggccgc ggctggcgcg ggagcgagaa
      601 ttcgttatcg gtacgtcact taagataagc tattgcaagc gaatggagga ggcgatgcga
      661 acaatgttgg tggggattgc catggtgctc attggtgccg gggcggcgcg gccggccgcg
      721 gcggcggaga tcaaggtcct cacggccggc gccttcaagc aggtgctgct ggcgctcgta
      781 cccgacttcg agcgcacgag cggtaataag gtcatcgtcg acaacgacac cgtcggcgcg
      841 ctgaccaagc ggatcgaggg cggagaaacg ttcgacctcg cggtgctgac gcccgcggcg
      901 gtcgacgctc tcgcgagcaa aggcaagctc gttgccggca gccgcgccaa ccttgcgcgc
      961 gtcggcgtcg gcgtcgtggt caaggagggc gcagcgaagc ccgacatcgg ctcggtggat
     1021 gcattcaagc gtgcgctgct tgccgcgaag tccgtcgccc atatcgatcc cgccgccggc
     1081 ggctcgagcg gcatctacgt cgcgggcttg ctcgacaagc tcggcatcgc cgctgagatc
     1141 aagcccaagg caaaactcat tcccggcggc gcggtggcgg agcatgtggc gcgcggcgag
     1201 gccgagctcg gcattcacca gatcagcgaa atcctgccgg tgaaaggcgt cacgctggtc
     1261 gggccgctgc cggcggaaat ccagaacgac acggtctacg cggctggact gggcgcgcag
     1321 gcgaaggaga gcgacgccgc gaaagccttg atcaaagcgc tcaccggccc ggccgccgcc
     1381 gaggtgctca agtcgaaggg catggagccg gcgggatcgt gaacgcgagc gacacgctcg
     1441 cgcgatgtga tgccgagcat cgagatcgga cgagcgatgc gtttgcgccg gcggaaaccg
     1501 tgatagcggc ggggacccga tgagcgtcaa ggcgctgttc ttcgacgtgt tcggcacgtt
     1561 ggtcgacttt cgcaccggcg tcgcgcgcga ggccgagagc attcttgggc ccaccggacc
     1621 caagctcgac tggggcgcct tcgccgatgc ctggcgcaag gagtatcagc cggccttgga
     1681 agaggtgcgt gccggccgca tggcatttcg caagctcgac ctgctgcacc gggaaaatct
     1741 cgatcgcatt ctgccgcggt tcggaatctc cgggcttgca gagggctcgg cgcgcaatct
     1801 caatctcgcc tggcatcgcc ttccggcttg gcccgacgtg ccgggagggc ttgcccggct
     1861 caagcgccat tttctgctgg cgccgctctc gaacggcaac atctcgctga tggtcgatct
     1921 cgcccgccgc aacaattttc cttgggatgc gatcctgggc gcggaaaccg ccggcgacta
     1981 caagcccaag ccgcgcgtct acctcgccgc ctgcgaggcc ttcgacctgc cgccagccga
     2041 gtgcatgatg gtcgccgcgc acaccaacga tcttctggcg gcggcgaaat gcgggctgcg
     2101 cacggcgcac atcgcgcggc ccggcgagca cggaccgggc accggagaaa ccgcccccaa
     2161 ggcgccggt
//
LOCUS       DATCWM010000397        11391 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_110968, whole genome shotgun sequence.
ACCESSION   DATCWM010000397 DATCWM010000000
VERSION     DATCWM010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 11391)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11391)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11391
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_110968"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(12..629)
                     /locus_tag="VIQ50_07650"
     CDS             complement(12..629)
                     /locus_tag="VIQ50_07650"
                     /inference="COORDINATES: protein motif:HMM:NF013933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HEY9360290.1"
                     /translation="MNWDLFVAFLLITAVLVITPGPIVTLVIATGAREGTRAALITVV
                     GTTLGNAVLLAAIAFGLSWVVRNAVMLFEVLRWIGAAYLIWLGIQAWRHAGETGAAAP
                     PPRGHLHVWRGFAVALSNPKSIAFFTAFLPQFVDPALPVEPQLALMCAVSVVLAAFTD
                     TAWAAAAGLGRAWFMHSWRAKLLGRLSGAALIGGGVWLSLARRPA"
     gene            complement(742..3492)
                     /gene="gyrA"
                     /locus_tag="VIQ50_07655"
     CDS             complement(742..3492)
                     /gene="gyrA"
                     /locus_tag="VIQ50_07655"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006259 - DNA metabolic process [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HEY9360291.1"
                     /translation="MADDNDQPPETPGPSGIRPVSITEEMKRSYLDYAMSVIVARALP
                     DARDGLKPVHRRILYSMHENGHTPDKKYVKAARVVGDVMGKYHPHGDQAIYDALVRMA
                     QDFSMRLPLIDGQGNFGSIDGDPPAAMRYTECRLARPAMELLDDIDKETVDFQPNYDG
                     TEKEPMVLPARFPNLLVNGAGGIAVGMATNIPPHNLGEVIDGCIALIENPDLGIEELI
                     GIIPGPDFPTGGIILGRLGIRAAYMQGRGSIVMRGKVEIETLRGDREAIIVSEVPYQV
                     NKAAMVERIGELWRDKKIDGIAALRDESDRDGYRVVIELKRDAMADVVLNQLYRYTPL
                     QSTFGANVVALEGGRPQVMTLKDLLTSFIAFREEVISRRTKYLLGKARDRAHVLVGLA
                     IAVSNIDEVIQLIRSSSDANAARDALMARDWPARDVEAMITLIDDPRHKVSTAGTYKL
                     SAEQAKAILDLRLQRLTALGRDEIKAELDKLAEEIADYLDILRSRARIQSIVKDELRA
                     VREKFATPRRTVIIEQEGEVEEEDLIHREDMVVTVSHLGYVKRVPLSTYRAQRRGGKG
                     RAGMQTREEDFVSRLFVASTHTPVLFFSSHGRVYKEKVWRLPQAAPQARGKALINILP
                     LEPGELVTTVMPLPEDETSWSELDVMFATTRGTVRRNKLSDFADVRRSGIIAMKLDEG
                     EGIVDVQICTEREDVLLTSAGGQCIRFSVTDVRVFQGRTSMGVRGIALAEGDKVISLS
                     ILRHVDASAEERVAYLRRASAVRRGLNGAEAEEPALDAEEAQDSADTIELGEQRYVEM
                     SAAEQFVLTISERGYGKRSSSYEYRVTGRGGKGIVAMDVRERDGSMRKKTGKLIASFP
                     VEDEDQLMLVTDGGQLIRTRVEGIRIAGRSTQGVIVFDTAEGERVVSVERISEDGEQN
                     GG"
     gene            complement(3671..4068)
                     /locus_tag="VIQ50_07660"
                     /pseudo
     CDS             complement(3671..4068)
                     /locus_tag="VIQ50_07660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667116.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2306 domain-containing protein"
     gene            complement(4156..4641)
                     /locus_tag="VIQ50_07665"
     CDS             complement(4156..4641)
                     /locus_tag="VIQ50_07665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEY9360292.1"
                     /translation="MAGSVNKVILVGNLGKDPEIRRTQDGRPIANLSVATSETWRDKA
                     TGERRERTEWHRVVIFNEGLCRIAEQYLKKGSKVYLEGQLQTRKWQDQSGQDKYTTEV
                     VLQNFNSQLTMLDRAGDRAGGEFGAEEDDFGSSGPSAREKKPALAGAGKRGDMDDEIP
                     F"
     gene            complement(4834..5352)
                     /locus_tag="VIQ50_07670"
     CDS             complement(4834..5352)
                     /locus_tag="VIQ50_07670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013215523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6790 family protein"
                     /protein_id="HEY9360293.1"
                     /translation="MRDAIAFALGNFTLTFFVLGLLGSAIALWRTRQPRTSAVVLEAL
                     FSYFLLFSIAFANLYNFVLHVFFGKVAAAFIGWEDSPFQLEVGFASLGFAALGLLAFK
                     GSLDLRLAAIVGPACFLWGAAGGHVFQMMTAHNFAPGNAGVIFYSDVLVPILGFIFLW
                     LQSSAARTYRPR"
     gene            5594..8578
                     /gene="uvrA"
                     /locus_tag="VIQ50_07675"
     CDS             5594..8578
                     /gene="uvrA"
                     /locus_tag="VIQ50_07675"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEY9360294.1"
                     /translation="MTDLFEKNRPHRPAPLDGARVIAIRGAREHNLKNVDLEIPRDRL
                     VVFTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAIS
                     IEQKTTSRNPRSTVGTVTEIYDYMRLLWARVGVPYSPATGLPIESQTVSQMVDRVMAL
                     PEGTRLYLLAPVVRGRKGEYRKELADYMKRGFQRVKIDGKFYEIVDAPALDKKFKHDI
                     DVVVDRVVVRSDIATRLADSLETALKLADGLAVVEYADAPTASASEDQGGAKKTAKIH
                     DHSGPQRLVFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPACGGLGVEQHIDPDLVI
                     PDRDRTLRGGAIAPWAKSSSPYYMQTLLALGKHYKFTVDTKWKDLPKKTQDAILYGSG
                     EDAIRFAYDDGLRSYETRKPFEGVVTNLERRWRESESDWAREEMAKYFTDIPCAACNG
                     YRLKPEALCVRVGGLHIGEVAEMSVKRAGEWFTQLPQALSAKQNEIAVRVLKEIRERL
                     KFLVDVGLEYLTLARASGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNA
                     RLLETLKRLRDLGNTVIVVEHDEDAIRTADHVLDIGPGAGIHGGRVVAQGAVDDLIAA
                     PSSLTGKYLSGEMAVAIPERRPKNARRMLTLVNARGNNLKNVNAEIPLGLFTCVTGVS
                     GGGKSTLLIDTLYKAMARKLNGASEAPAPHDRLEGLEHLDKVIDIDQSPIGRTPRSNP
                     ATYTGAFTPIREWFAGLPEAKARGYEPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDV
                     YVTCDVCKGKRYNRETLEVLFKGKSIADVLDMTVEEALEFFKAVPRVRNVLELLHRVG
                     LDYIHVGQQATTLSGGEAQRVKLAKELSKRATGRTLYILDEPTTGLHFHDVKKLLDVL
                     HELVEQGNTVVVIEHNLEVIKTADWIIDLGPEGGDGGGEIVAAGTPEDIVKVKRSYTG
                     QFLAPVLSRRDAKRKPRTEAAE"
     gene            8672..8950
                     /locus_tag="VIQ50_07680"
     CDS             8672..8950
                     /locus_tag="VIQ50_07680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360295.1"
                     /translation="MGRTLLQTLKIICYVALGALLAGFAVLAFLGALDICPRLDEGGI
                     SCVSPAFEVIASIAMAIVLLSVFMGLPALLALGGLIFLAFDLLHLWRK"
     gene            complement(8981..9439)
                     /locus_tag="VIQ50_07685"
     CDS             complement(8981..9439)
                     /locus_tag="VIQ50_07685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020090850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEY9360296.1"
                     /translation="MILALRILYFEDLSVGMTETLSKTIASSDVVGFAQLTGDRNPIH
                     LSEHFAAKTQFGKRIAHGLYTAGLISAVLGTRLPGPGAVYISQTLNFRAPVKIGDRVD
                     VTVTVAELIPERQRARLACSCKVGEEIVLDGEAWVKVPSAAKSKRPLPRL"
     gene            complement(9650..10267)
                     /locus_tag="VIQ50_07690"
     CDS             complement(9650..10267)
                     /locus_tag="VIQ50_07690"
                     /inference="COORDINATES: protein motif:HMM:NF024809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEY9360297.1"
                     /translation="MAKLTLYHAAPSRSSITRWMLEEIGEPYDIHLLSLSKGDNRASE
                     YLAVNPMGKVPALKHGDTVITEGAAICAYLADEFPRAKLNVPIGTPRRGVYLKWLFFG
                     PNCIEAAMIDRASPRKEEARRAMLGYGDFDTVMDVTAKAVAKGPFLMGEQFTAADVIV
                     GSTLRWGMMFKLLPERPEFIAYTNRLAARPALQRAEAQDKELAAA"
     gene            10567..10944
                     /locus_tag="VIQ50_07695"
     CDS             10567..10944
                     /locus_tag="VIQ50_07695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360298.1"
                     /translation="MTRARSRIGFACSVQDGRDFTGRLVLDLVDWVRREEGRPIAYSL
                     FGHSAGGQFLDRLAAFVPTEARRIVVANAGSYVFPSLEIDAPFGLGKVYSGTQGEAAL
                     RRYLEQPLTIYLGQGDIYAKFFL"
BASE COUNT         2095 a         3708 c         3575 g         2013 t
ORIGIN      
        1 ttccggctcg gctacgccgg ccgccgtgcc aaggagagcc acactccgcc gccgatcaac
       61 gccgcgccgg acagccgacc caataatttc gctcgccaag agtgcatgaa ccatgcccgc
      121 ccgagcccgg ccgcggcggc ccaggcggta tcggtgaacg cggcgagtac gaccgagacg
      181 gcgcacatca gcgcgagctg cggttcgacc ggaagggcgg gatcgacgaa ctgcggcaag
      241 aaagccgtga aaaacgcgat gctttttggg ttggatagcg cgaccgcaaa accgcgccag
      301 acatgcaggt gcccgcgcgg cggcggcgcg gccgcgcccg tctcgccggc atggcgccac
      361 gcttggatgc cgagccagat cagataggcc gcgccgatcc agcgcaaaac ttcgaacagc
      421 atgacggcat tcctgaccac ccagctcaag ccgaaggcaa tggcggcgag caagaccgca
      481 ttgccgaggg tggtgccgac gacggtgatg agcgcggcgc gcgtgccctc ccgcgcgccg
      541 gtcgcgatga cgagcgtcac gatcggtcct ggcgtgatga ccaggacggc ggtgatcagg
      601 aggaaagcga caaacaggtc ccagttcatc ttgcctccag gctgcgcgcg tggtcggtgc
      661 aatccacgct gcttatggga gtagcaacct cgcgatcaag tctgccgccg gcgcccgccg
      721 tgccacaagc atgcggcgca actagccgcc gttctgctcg ccgtcctcgc tgatgcgctc
      781 aaccgagacc acgcgctcgc cttccgcggt atcaaaaacg atcacccctt gggttgagcg
      841 tccggcaatg cggattccct cgacgcgcgt gcgaatgagc tgccccccgt cggtcaccag
      901 catgagttga tcttcgtctt ccaccgggaa cgaggcgatc agcttgccgg ttttcttcct
      961 catgctgccg tcgcgttcgc gcacatccat ggccacgata ccttttccgc cgcggccggt
     1021 gacgcggtat tcgtaggacg aggagcgctt gccataaccg cgctcggaaa tcgtgagcac
     1081 gaactgctcc gccgcagaca tttccacgta gcgctgctcg ccgagctcga tcgtatcggc
     1141 ggaatcctgc gcctcttccg cgtcgagcgc cggttcttcg gcctcggcgc cgttgagccc
     1201 gcgccgcacc gcgctggcgc gccgcaaata ggcgacgcgc tcctcggcgc tcgcgtccac
     1261 gtgccgcaga atcgacagcg agatcacctt gtcgccttcg gcgagcgcaa tgccgcgcac
     1321 acccatcgag gtgcggccct gaaatacgcg tacgtccgtg accgagaagc gaatgcactg
     1381 gccgccggcc gaggtgagca gcacgtcctc gcgctcggta caaatctgca cgtcgacgat
     1441 gccttccccc tcgtcgagct tcatggcgat gatgccggaa cggcgtacat cggcgaaatc
     1501 ggaaagcttg ttgcggcgca cggtgccgcg cgtggtggcg aacatcacgt cgagctcgct
     1561 ccagctcgtc tcgtcttccg gcagcggcat gacggtggtg accagttcgc cgggctcgag
     1621 cggcaggatg ttgatcagcg ccttgccgcg cgcctgcggc gccgcctgcg gcagccgcca
     1681 caccttctcc ttgtagaccc ggccgtgcga cgagaagaac agcaccggcg tgtgagttga
     1741 ggccacgaac agccgcgaga cgaagtcctc ctcgcgcgtc tgcatgccgg cgcgaccctt
     1801 gccgccgcgg cgctgcgcgc gataggtcga gagcggcacc cgcttgacgt agccaaggtg
     1861 cgaaaccgtg accaccatgt cctcgcggtg gatgaggtct tcctcctcca cctcgccttc
     1921 ctgctcgatg atgacggtgc ggcgcggcgt ggcgaacttc tcgcgcacgg ctctgagctc
     1981 gtccttcacg atgctctgaa tgcgagcacg cgagcgcagg atatcgagat aatcggcgat
     2041 ctcctcggcg agcttgtcca gctcggcctt gatctcgtcg cggccgagcg cagtcaagcg
     2101 ctgcagacgt agatcgagaa tggctttggc ttgttcggcc gagagcttgt aggtgccggc
     2161 ggtcgagacc ttgtggcgag gatcgtcgat cagtgtgatc atcgcctcga cgtcgcgcgc
     2221 cggccaatcg cgcgccatca aggcgtcgcg cgcggcgttg gcgtcggagg aggagcggat
     2281 cagctgaatc acttcgtcga tattgctgac cgcaattgca agcccgacca gcacgtgggc
     2341 gcgatcacgc gccttgccaa gcagatactt ggtgcgtcgg gagatcacct cctcgcggaa
     2401 ggcgatgaag gaggtgagca ggtccttgag agtcatcacc tgcgggcggc cgccctcgag
     2461 cgcgaccacg ttggcgccga aggtggattg cagcggggta tagcggtaga gctgattgag
     2521 aacgacgtcg gccatggcgt cgcgcttgag ctcgatgacg acgcgatagc catcgcggtc
     2581 ggactcgtcg cgcagcgcgg cgatgccgtc gattttcttg tcgcgccaca gttcgccaat
     2641 tcgctcgacc atcgccgcct tgttcacctg gtagggaacc tcgctgacga tgatagcctc
     2701 gcggtcgccg cgtagcgttt cgatctccac cttgccgcgc atcacgattg agccgcggcc
     2761 ttgcatatag gcggcgcgaa tgcccaagcg cccgagaatg atgccgccgg tcggaaagtc
     2821 ggggccggga atgatgccga tcaattcctc gatgccgaga tcgggatttt cgatcagcgc
     2881 aatacagcca tcgatcacct cgccgagatt gtgcggcggg atgttggtcg ccatgccgac
     2941 cgcgatgccg cctgcgccgt tcaccagaag gttggggaag cgcgccggca gaaccatcgg
     3001 ctccttctcg gtgccgtcgt agttcggctg gaagtcgacg gtctccttgt cgatgtcgtc
     3061 gagcagctcc atggccggcc tggccagccg gcattcggtg taacgcatcg ccgcgggcgg
     3121 atcgccgtcg atcgagccga agttcccctg cccgtcgatg agcggcaggc gcatggagaa
     3181 atcctgcgcc atgcgcacca gcgcgtcgta gatcgcctgg tcgccgtgcg ggtggtattt
     3241 gcccatcacg tcgccgacca cacgcgccgc cttcacatat ttcttgtcgg gcgtgtgtcc
     3301 gttctcgtgc atcgaataga ggatgcgccg atgcaccggc ttgaggccgt cgcgggcgtc
     3361 cggcagcgcg cgcgccacga tcacgctcat ggcgtaatcg agatagctgc gcttcatctc
     3421 ctcggtgatg gagacggggc gaataccgga cgggccgggg gtttccggcg gctggtcgtt
     3481 gtcgtcggcc aagagaaaat cccgtggggc gaggttggcg aggtcttagc tgattcagcc
     3541 ggcaggcgcc acccaaaaac gccttgggtt cgagctattt tcatatggga attcagaggc
     3601 ttatcgtcaa gctcgcccgg gctcagaaaa cgctgcgccg gcgctcggat tgggccgatt
     3661 taggccgcgc tcaattgccg aacaccaccg cgtgcatgat gcggccgggc agcagcgtga
     3721 acaggcccgc gacgacgagc gcaccggtaa aaatagcgat catggcgttg cggtgccgct
     3781 cgacgcggtg gcgccgcgcg tgcacgaccg caagcggcag cgttgcaagc gtaaagatcg
     3841 agagcagatg gatcgggctc caccgacccc agacgcgcag gtcatggatc cagaacgagc
     3901 tcgccgccac agtgaccatg agcgcaaccc agagccaacc gatggtgcga tgaggcagcg
     3961 tccctttggg cgcggcaagc tgtaccgcgc cgagcccgaa ggcggccaac gccgcaaagc
     4021 atgcaactgg gtggcggggg cggcgttcaa cagcggcgcg agcgacacgg cctctcttcg
     4081 cctcacctca cgccgcgctt gcgcgattgt ctgaattgga cggcaagagc ggcagcggaa
     4141 tccgcgggcg tcccgtcaaa agggaatctc gtcgtccatg tcgccgcgtt tgccggcgcc
     4201 ggcgagagcc ggcttcttct cgcgcgctga tggccccgaa gaaccgaaat catcttcctc
     4261 cgcgccgaac tcgccgccgg cgcgatcacc cgcgcggtcg agcatggtga gctgagaatt
     4321 gaagttctgc agcacgacct cggtggtgta cttgtcctgg cccgattggt cctgccattt
     4381 gcgcgtctgc aattggccct caagatagac cttcgaaccc ttcttcaaat attgctcggc
     4441 aatccggcac agcccctcgt tgaagataac gacgcggtgc cattcggtgc gctcgcggcg
     4501 ctcgccggtg gccttgtcgc gccaggtttc cgaggtcgcc acgctcaaat tggcaattgg
     4561 gcggccgtct tgcgtgcgcc ggatctcggg atccttccca agattgccga ccaggatcac
     4621 cttgttgacg ctaccggcca tgacgctctc ctgctcgttg cctgcatcct cggcacccta
     4681 atcccaagct ccggccacgt cgccgctttc gccttgcgcc atcatgcttt tccacagcag
     4741 acggcgcgag tgtgggcctg gggctatgtt ctctatttgt tctaccatca aacgcctgcc
     4801 gatgcaaccg ttctcgcatg gatctttttg ccctcatcgc ggccgatatg tccgggcggc
     4861 actgctttgt agccagagaa atatgaagcc caagatcgga accaagacat cgctgtaaaa
     4921 aatgacgcca gcattgccgg gagcgaaatt gtgcgcggtc atcatctgaa aaacgtgacc
     4981 gccggccgcg ccccatagaa agcaggccgg cccgacgatg gccgccagtc gcaaatcgag
     5041 gcttcccttg aaggccagca atcccagcgc tgcaaagccg aggctcgcaa agccgacctc
     5101 taactggaag gggctgtcct cccatccgat gaaggctgcc gccaccttcc caaagaagac
     5161 gtgcaagacg aaattgtaga ggttggcaaa ggcgatcgag aacaggagga aataggagaa
     5221 cagcgcttcc aggacgaccg cagacgtacg cggttgacgc gtgcgccaga gagcgatggc
     5281 ggagcccagc aagcccagaa cgaagaacgt gagcgtgaaa ttgccgagtg caaacgcgat
     5341 cgcgtctctc attgcaatgt tccgcgggcc aagcggcagc cgtcgatgcg ggctttctcc
     5401 aaattactgc cccatgccat gggcacagtg acgcctgcat cgccgcgttg tccacagccg
     5461 tgcggtggcc gaatggcggg cttttccctc gccgggctgg cgaaagtccg ccgttcttac
     5521 tacgttccat gaagtccgcg cagccgcgtg gggcttcctc gatctcgctg atctgatcgc
     5581 gccgacggac ccgatgaccg acttgttcga aaagaaccgc cctcaccgcc cggcgccctt
     5641 ggacggggcg cgcgtcatcg cgatccgcgg cgcgcgcgag cacaatctca agaacgtcga
     5701 cctcgaaatc ccgcgcgacc ggctcgtggt gttcaccggg ctgtcgggct cgggcaaatc
     5761 ctcgctcgcc ttcgatacca tctacgccga gggacagcgc cgctacgtgg aatcgctttc
     5821 cgcctatgcg cggcagttcc tcgagatgat gcagaaaccg gacgtcgacc agatcgacgg
     5881 cctctcgccc gccatctcga tcgaacagaa gaccacctcg cgcaatccgc gctccacggt
     5941 cggcacagtc accgagattt acgactacat gcggctgctc tgggcgcgcg tgggcgtgcc
     6001 ctactcgccc gccaccggct tgccgatcga aagccagacg gtgtcgcaaa tggtcgaccg
     6061 ggtaatggcg ctgccggagg gcacgcggct ctatctgctc gcgccggtgg tgcgcgggcg
     6121 caagggcgag taccgcaagg aactcgccga ctacatgaag cgcggcttcc agcgggtgaa
     6181 gatcgacggc aaattctacg agatcgtcga cgcgccggcg ctcgacaaga aattcaagca
     6241 tgacatcgac gtggtcgtcg accgcgtggt ggtgcgtagc gacatcgcca cgcggctcgc
     6301 ggattcgctg gagaccgcgc tcaagctcgc cgacggattg gcggtggtcg agtacgcgga
     6361 cgctcccaca gcctcagcat ctgaggatca gggcggcgca aagaagacgg cgaaaattca
     6421 cgatcacagc ggcccgcagc gcctcgtctt ctcggagaaa ttcgcttgcc cggtatccgg
     6481 cttcaccatt ccggaaatcg aaccgcggct gttctcattc aacaatccgt tcggcgcctg
     6541 tcccgcctgc ggcgggcttg gcgtcgagca gcacatcgat cccgacctcg tcattcccga
     6601 ccgcgacagg accttgcgcg gcggcgcgat cgcgccatgg gcgaagtcga gctcgcccta
     6661 ctacatgcag acgctgctcg cgctcggcaa gcattacaag ttcaccgtcg acacgaagtg
     6721 gaaggacctg ccgaaaaaga cgcaggacgc gatcctttac ggctccggcg aggatgcgat
     6781 ccgcttcgcc tatgacgacg ggctgcgttc ctacgagacc cgaaagccgt tcgagggcgt
     6841 ggtcaccaat ctcgagcggc gctggcgcga gagcgagagc gattgggcgc gcgaggagat
     6901 ggccaaatat ttcaccgaca tcccctgcgc cgcctgcaac ggctatcggc tcaagcccga
     6961 ggcgttgtgc gtgcgcgtcg gcggtctgca catcggcgag gtcgccgaga tgtcggtcaa
     7021 gcgcgcgggc gaatggttca cgcagttgcc gcaggcgctc agcgccaagc agaacgaaat
     7081 cgcggtgcgg gtgctcaagg agatccgcga gcggctcaag ttcctggtgg acgtcgggct
     7141 cgaatatctc acgctggcgc gcgcttcggg cacgctgtcg ggcggcgaga gccagcgcat
     7201 ccggctcgcc tcgcagatcg gctccggact caccggcgtg ctctacgtgc tcgacgagcc
     7261 ctcgatcggg ctgcaccagc gcgacaacgc gcggctgctc gagacgctca aacgcctgcg
     7321 cgatctcggc aataccgtga tcgtcgtcga gcacgacgag gacgccatcc gcaccgccga
     7381 ccacgtgctc gacatcggac ccggcgccgg catccacggc ggacgcgtcg tggcgcaggg
     7441 cgcggtcgac gatctgatcg cggcgccctc ctcgctcacc ggcaaatatc tctccggcga
     7501 gatggcggtg gcaattcccg agcgccggcc gaaaaacgcg cggcgcatgc tgaccctggt
     7561 caatgcgcgc ggcaacaatc tcaagaacgt caacgccgaa atcccgctcg gcctgttcac
     7621 ttgcgtcacc ggcgtatccg gcggcggcaa atcgacgttg ctgatcgaca cgctctacaa
     7681 ggcgatggcg cgcaagctca acggcgcttc cgaggccccc gccccgcacg accgcctcga
     7741 gggcctcgag cacctcgaca aggtgatcga catcgatcag tcgccgatcg gccgcacccc
     7801 gcgcagcaat ccggcgacct ataccggcgc attcaccccg atccgcgagt ggttcgccgg
     7861 cctgccggag gcgaaggcac gcggctacga gcccggccgc ttctccttca acgtcaaggg
     7921 cgggcgctgc gaggcctgcc agggcgacgg cgtgatcaag atcgagatgc acttcctgcc
     7981 cgacgtctac gtcacttgcg acgtctgcaa gggcaagcgc tacaaccgcg agacgctcga
     8041 ggtcctgttc aagggcaaat cgatcgccga cgtgctcgac atgacggtcg aggaggcgct
     8101 ggaattcttc aaggccgtgc cgcgggtgcg caatgtgcta gaactgctgc atcgtgtcgg
     8161 cctcgactac atccacgtcg gccagcaagc caccacgctc tccggcggcg aggcgcagcg
     8221 cgtgaagctc gccaaggaat tgtccaagcg cgccaccggc cgcacgctct acatcctgga
     8281 cgagccgacc acggggctgc acttccacga tgtgaagaag ctgctcgacg tgctgcacga
     8341 gctggtcgag cagggcaaca cggtggttgt gatcgagcac aatctggaag tgatcaagac
     8401 cgccgactgg atcatcgacc tcggcccaga agggggcgac ggcggaggcg agatcgtggc
     8461 cgccggcacg ccggaggaca tcgtcaaggt caagcgcagc tacaccggac aattcctggc
     8521 gccggtgctc tcccggcgcg acgccaagcg caagccgcgc accgaggcgg cggagtaacc
     8581 ttctctcgga tttaatgtgc ctccgccgac gctgcggccg ctgatcgacc ggcggcgacc
     8641 tctcgcgact agcgcaaaag gaattccggc cgtgggccga actttgctcc agacactgaa
     8701 gattatttgc tacgtcgcct tgggcgctct gctcgccggc ttcgccgtcc tcgccttcct
     8761 cggcgcgctc gatatctgcc cgcggctcga cgaaggcggg atttcctgcg tgtcgcccgc
     8821 gttcgaagtc atcgcgagca ttgccatggc aatcgtcctg ctgagcgtct tcatgggcct
     8881 gccggctctg ctcgcgctcg gcgggctcat ctttctggca ttcgatctcc tgcatctatg
     8941 gcgcaagtga cgatggaagt tgcccgtccg accctgccac tcacagccgc ggcagcgggc
     9001 gcttggattt ggcggcagag ggcaccttca cccacgcctc gccgtcgagc acgatttcct
     9061 cgcccacctt gcagctgcag gcaagccgag cgcgctggcg ctccgggatc aactccgcca
     9121 ccgtcacggt cacgtcgacc cggtcaccga tcttgaccgg ggcgcggaaa ttgagcgtct
     9181 gcgaaatata gactgcgccg gggccgggaa ggcgcgtgcc caacaccgcc gagatgagac
     9241 ccgccgtgta gaggccatgc gcgatgcgtt tgccgaactg cgtcttggcg gcgaagtgct
     9301 ccgagagatg gataggatta cgatcgccgg tgagctgcgc gaagccaacg acatcggatg
     9361 aagcaatggt cttcgacaac gtctcggtca taccgaccga gagatcctcg aaatagagaa
     9421 tgcgcagcgc cagaatcatc gtctggcaac gtacctccaa ttctgcgcat gctccacacg
     9481 gcgacggata tccactttgt catggccgga cttgtcccga ccatccacgc cgttgcggct
     9541 gcaaaacact aagacgtgga tgcccggcag cgcagacaag tttacgcagt ctgcgcaagt
     9601 ttgactgcgt gcccggcatg acgcattcat aatcggccgt tctttcagct cacgccgcgg
     9661 ctagctcctt gtcctgtgct tccgcacgct gcagcgccgg acgcgcggca agccgattgg
     9721 tgtaagcaat gaattcgggg cgctcgggca ggagcttgaa catcatgccc cagcgcaaag
     9781 tcgatccgac gatcacgtcg gcggcggtga actgctcgcc catgagaaac gggcccttcg
     9841 cgaccgcctt cgccgtcaca tccatcacgg tatcgaaatc gccatagccc agcatcgcac
     9901 gccgcgcctc ttccttgcgc gggctggcgc gatcgatcat cgccgcttcg atgcagttcg
     9961 ggccgaagaa cagccacttg agatagacgc cgcggcgtgg tgtaccgatc ggcacattga
    10021 gcttggcgcg gggaaattcg tcggcgagat aggcgcagat cgccgccccc tcggtgatga
    10081 cggtgtcgcc gtgcttgagc gccggcacct tgcccatggg gttcaccgcg agatattcgg
    10141 aggcgcggtt gtcacccttg ctcaagctca agaggtggat gtcatacggt tcgccgatct
    10201 cctcaagcat ccatcgcgtg atcgacgacc gcgacggggc ggcgtgataa agcgtgagct
    10261 ttgccatgcg gtactccatt atcggatgag tgatgcttta atccgcaatc gtgtcggttc
    10321 tgcgaataac gcccgcgcga gaacatgaga tgaatgggat aacacgcgtt gcgactgcgg
    10381 ctacgatgct gggcacgctg ctcggtgcca tgccgctcgg ggctgccccg atcgaaaccg
    10441 gccgacagat cgccgatgtg aacggcgcgc ccatggtggt cttcacctac cgcccggtgg
    10501 gatgttccga tccgtcgctg ctcatggtct ttcacggcat cgcccgcaac gcccgcacct
    10561 accgcgatga cgcgcgcgcg ctcgcggatc ggctttgcct gctctgtgca ggacgggcgc
    10621 gacttcaccg gcaggctcgt gctcgatctc gtcgactggg tgcgccggga ggaagggcgc
    10681 ccgatcgcct attccctgtt cggccactcg gccggaggcc aatttctcga ccgtctcgcc
    10741 gccttcgtgc cgaccgaggc gcggcgcatc gtagtggcaa atgcgggaag ctacgtgttt
    10801 ccgagcctcg agatcgatgc gcccttcgga ctgggaaagg tctattcggg cacgcagggc
    10861 gaggcggcgc tacggcgata tctggagcag ccgctgacca tctatctcgg ccaaggcgat
    10921 atttacgcaa aattcttctt ataaatcaag aggcttaggt tctgtgtcca ataaacggcc
    10981 aatatagtcg cgctgcctcg gatctcgccc tcaataatcg caccagcggc ctcaccacag
    11041 gctgtggcgg ccccttctag cgggcatggt ggtgtgagct tcagtcgcgc cgatatccag
    11101 cgataggcgc acgcgttccg aaacaagtgc tcggcaatgt gagggtaaat cctgcccgtt
    11161 gcatcgcgac gcagaactgc gcgtccattt gttggtgctc gaggactgac cagtagccga
    11221 cgcgccgatc aagggcgtcg cagagggcgt cggtactggg gccggttgga ttctttcgcg
    11281 gcatgaatcc ctattagcac agcgctgctg cgcgcctctt tgagaattat caaattgtcg
    11341 attatcacga aaacgaacag aatttccgta tgaacttgat tcgcatcacg g
//
LOCUS       DATCWM010000398         2730 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_8345, whole genome shotgun sequence.
ACCESSION   DATCWM010000398 DATCWM010000000
VERSION     DATCWM010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2730
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8345"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(185..1165)
                     /locus_tag="VIQ50_07700"
     CDS             complement(185..1165)
                     /locus_tag="VIQ50_07700"
                     /EC_number="1.2.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HEY9360299.1"
                     /translation="MAELTYRDAVARGIAQEMARDPDVIFFGEDVAKAGGVFKTTVGL
                     YEQFGPKRVRDCPISEQAILGAAMGAAMTGLKPIAEIMFSDFFAVCFDYIANEFSKSR
                     YMSNGQLKCPLVVRTANGAGSRFGAQHSQSVENWAMMIPGLKVVAPSSPRDVIGLLAA
                     AVRDPDPVIFFEHKSLYPTKGEVPEGEIVDRLGSASIVRPGKDATILALALMVPRALE
                     AAERLKSEHGIDCEVVDVRSLVPLDTQTMLGSVGRTHRLFTVEENPRLCGWGAEIVSI
                     VADEAFYDLDGPPVRITTPHIPLPAADILEDIALPTVDRIVDRVRRSMQA"
     gene            complement(1153..2187)
                     /locus_tag="VIQ50_07705"
     CDS             complement(1153..2187)
                     /locus_tag="VIQ50_07705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008873014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HEY9360300.1"
                     /translation="MLKNPAHASDPSRAGINDDIGEKTRLTLYRMQVEIRESEQRAFD
                     LFLQNLVKGTSHLSLGQEAVAAGFAAAMKQGDLSFCTYRGHAHTLARGVPIEKVLGEL
                     MQRDNGLMRGKGGSMHLTSAEHGVLGSYAIIGAHLPIACGAALRAQYKGDGDVTVCFF
                     GDGTTNIGAFHEALNFAAVWKLPVIFVCENNLYMEYTPIGEVTAVEHPAADRAAAYGL
                     ERIVLDGNDADVVYRAAVAAYAKARAGGGPSLIECITYRHSGHSRADPAKYRPEGELE
                     KWKERDPIKIYRERLKQFGIGEEAIAAIEADVRRRVDEATEKCKAAPPPSLDLLTADV
                     YADGGFAWRN"
     gene            complement(2320..>2730)
                     /locus_tag="VIQ50_07710"
     CDS             complement(2320..>2730)
                     /locus_tag="VIQ50_07710"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY9360301.1"
                     /translation="LSAALCYALYSIATRILARTDSNETTLFYSNVVGALALLPVVPL
                     VWTTPSDPLVIALMVVTGVIGSFGHYLLIAAHRLAPAAVLSPFIYSEIVLVTALGFLV
                     FGDVPNRFTLTGAAIVVASGLYLLHRERKVRSKA"
BASE COUNT          484 a          877 c          903 g          466 t
ORIGIN      
        1 atcttggcct cggtcgcggg atcgaggaca tcgaaccggc ccccatcgga ggatttgcgc
       61 catttgccgc cgatccacag atcggtcgga acattggcga ggaggttgtc gtatctggaa
      121 ctcatgggtg cagcctcatg actggtaatt ccggatccga tgggcgcttg cgcacgatgc
      181 cacctcacgc ttgcatcgac cggcgcacgc ggtcgacgat gcgatcgacc gtgggcagcg
      241 cgatgtcttc caagatgtcg gccgccggaa gcgggatgtg cggcgtcgtg atccgcaccg
      301 gcggcccgtc gagatcgtag aacgcctcat cggctacgat cgagacgatt tcggcgcccc
      361 acccacacag ccgcggattc tcctcaaccg tgaacaggcg gtgcgtgcgg ccgaccgagc
      421 cgagcatggt ctgcgtatcg agcggcacca gcgatcttac gtccacaact tcgcagtcga
      481 tcccgtgttc cgacttgagc ctctcggccg cctcgagcgc ccgcggcacc atcagcgcca
      541 gcgccaggat ggtggcgtcc ttgccgggcc gcacgatgct ggcgctgccc agccgatcga
      601 cgatctctcc ctcgggaact tcgcccttcg tcggatagag cgatttgtgc tcgaagaaga
      661 tgacaggatc gggatcgcgc accgcggcgg cgagcagccc gatgacgtcg cgcgggctcg
      721 aaggcgccac caccttgagc ccgggaatca tcatcgccca gttctcgacg ctttggctgt
      781 gctgggctcc gaagcgggag cccgcgccgt tggcggtgcg caccaccagc gggcatttga
      841 gctggccgtt ggacatgtag cggctcttgg agaactcgtt ggcgatgtaa tcgaagcaca
      901 ccgcgaagaa atccgagaac atgatctcgg cgatcggctt caagccggtc attgccgcgc
      961 ccatggcggc gcccaagatc gcctgctcgg agatcggaca gtcgcgcacg cgcttgggcc
     1021 cgaattgctc gtagagtccc accgtggtct tgaacacgcc gccggccttg gccacgtcct
     1081 cgccgaagaa gatgacatcc ggatcgcgcg ccatctcctg ggcgatgccg cgggcgaccg
     1141 cgtcgcgata ggtcaattcc gccatgcgaa ccctccgtcg gcatagacgt cggcggtgag
     1201 gagatcgagc gacggcgggg gcgccgcctt gcacttctcg gtcgcctcgt cgacgcgccg
     1261 ccgcacgtcg gcctcgatcg ccgcgatcgc ctcctcgccg atgccgaact gctttagccg
     1321 ctcgcgatag atcttgatcg gatcgcgctc cttccatttt tcgagctcgc cctcggggcg
     1381 gtatttcgcc gggtcggcgc gcgaatggcc gctgtgccgg taggtgatgc actcgatcag
     1441 cgaggggccg ccgcccgcgc gcgccttggc ataggccgcg acggcggcgc ggtagacgac
     1501 gtcggcgtcg ttgccgtcca ggacgatgcg ctcaagcccg taagccgcgg cgcgatcggc
     1561 ggcgggatgc tcgaccgccg tcacctcgcc gatcggcgta tattccatat agagattgtt
     1621 ctcgcagacg aagatcaccg gcagcttcca caccgcggcg aaattcagcg cctcgtggaa
     1681 ggcgccgata ttggtcgtgc cgtcgccgaa gaagcacacc gtcacgtcgc cgtcgccctt
     1741 gtattgcgcg cgcaaagccg cgccgcaggc aatcggcaga tgcgcgccga tgatggcgta
     1801 ggaaccgagc acgccatgct cggcggaggt gagatgcatg gagccgccct tgccgcgcat
     1861 gaggccgttg tcgcgctgca tcagctcgcc caggaccttc tcgatcggca ccccgcgcgc
     1921 gagcgtatgc gcgtgtccgc gataggtgca gaacgagagg tccccctgct tcattgccgc
     1981 ggcaaagccc gctgccactg cctcctggcc gagcgagagg tggctcgtgc ccttgaccag
     2041 gttctgcagg aagagatcga atgcacgctg ctcgctttcg cgaatctcga cctgcatgcg
     2101 gtacagcgtg agccgcgtct tctcgccgat gtcgtcgttg atgccggcgc gagaggggtc
     2161 ggacgcatgg gccgggtttt tcagcatgaa cgccacctcg ataacagccg gcgaatgggg
     2221 aagccggcaa cggaaattag ccttagtcct gaaggtgagg caacggcgcc cagtcatggc
     2281 cgggcttgcg cgggaacgac cttcgggaga cttggccgat caggcctttg atcttacttt
     2341 gcgctcccga tgcagaaggt aaaggccgga ggcgaccacg atcgccgcac cagtgagcgt
     2401 aaagcggttc ggcacgtcgc cgaatacgag aaagcccaac gcggtcacca ggacgatttc
     2461 actatagatg aacggcgaca gcacggcagc cggggccaag cggtgggcgg cgatcaggag
     2521 atagtgtccg aagctgccga tcacccctgt caccaccatg agagcgatca cgaggggatc
     2581 gctcggcgtg gtccatacca gcggcaccac cggcagcagg gccagcgcgc ctacgacatt
     2641 ggagtagaac agcgtggtct cgttggaatc ggtgcgcgcg aggatgcggg tggcgatgga
     2701 atagagcgcg tagcagagcg cggcggagag
//
LOCUS       DATCWM010000399         8511 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_143476, whole genome shotgun sequence.
ACCESSION   DATCWM010000399 DATCWM010000000
VERSION     DATCWM010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8511
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143476"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..198
                     /locus_tag="VIQ50_07715"
     CDS             <1..198
                     /locus_tag="VIQ50_07715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010686870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360302.1"
                     /translation="DWTERRYHLAGHVGACLLRLCVNRSWITRHRDSRAVTITPAGEV
                     QMRTIFGLALAEAENTAVPSH"
     gene            complement(334..771)
                     /locus_tag="VIQ50_07720"
     CDS             complement(334..771)
                     /locus_tag="VIQ50_07720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360303.1"
                     /translation="MAKVLTHPRCINCHPATNRLTQGNDEHPHQPLATRETPCVTCHT
                     DQNFTLHERVSYQSIPGHPRWMAAPIEMAWEGKSVGEICRQIKDPDRNGGRNLSLLHE
                     HLAHDDLVAWGWQPGAGRDPAPGSQALLGELVQAWIDTGALCP"
     gene            764..1027
                     /locus_tag="VIQ50_07725"
     CDS             764..1027
                     /locus_tag="VIQ50_07725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360304.1"
                     /translation="MATSAKKARERWAGSEIPANAAGGCNVLAGWAEPETDAATIMQH
                     SKAMVDPGRMSLMPPTEDNFSRLQKFISLRQYSKKLHPHADRC"
     gene            1039..1509
                     /locus_tag="VIQ50_07730"
     CDS             1039..1509
                     /locus_tag="VIQ50_07730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY9360305.1"
                     /translation="MTDPYRPKGLSSAVCYQDAKAAFRWLEAAFGFEPLFVILGPDGS
                     LAHSEMTFGNSVVMVGNEWSADHKSPKSIGGENTQTVHVQLAQGEDIDAHCERARKAG
                     AGILQEPQTQFYGDRTYRARDPEGHIWTFGVTEKRMTPEEWDKASGLTTKKRLD"
     gene            1663..2763
                     /locus_tag="VIQ50_07735"
     CDS             1663..2763
                     /locus_tag="VIQ50_07735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9360306.1"
                     /translation="MAELQYNRRAFTAGMASLLCPVSLDLARAQQLERSSLKLGVANK
                     AHLYYLPVTIADRRGHFRDYGLTVTMTDFEGGGQAFDALLAGAVDVAAGAYEHTLRAQ
                     AMGQDVRAVIELGRFPGVVLAVGKDRPFKSISDLKGLNIGVTAPSSSSHFFVLYLMAK
                     AGLAPDDVSFVGVGGGERAVEAMKTGEIDAISNLDPVITRLQQDGTIRIIVDSRLPRT
                     NYDIFGGTNPAAVLYGREEFIVANRATMQALVNAFYKTLRWIATATTDEIVDTVPAEY
                     FLGDRAVYVKALRANLLVYSRTGIITRQGMNSALKMMATFDPDLKDRKIDLQRTFDDR
                     FITRAAVLFDDPTNSDLATDERRPEIDPTFRD"
     gene            2815..4170
                     /locus_tag="VIQ50_07740"
     CDS             2815..4170
                     /locus_tag="VIQ50_07740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018044030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxycarboxylate transporter family protein"
                     /protein_id="HEY9360307.1"
                     /translation="MQQSVSISASPELLHARWWPQGWWRIVDMRIGIIPIPIYVILVA
                     LLAGFTYTGDIKGEISIMIAILVIGGFTCAEIGKRTPVLRNIGAAAIFATFVPSALAY
                     YKLLPPQLEKSVVEFTKYTNFLYLFIACIIVGSILGMDRKVLVQGFLKIFVPLVVGSI
                     TAAIVGTLVGTLLGLGAFNTFFFVVIPIMAGGIGEGAIPLSVGYAEILGQPHGDMFAL
                     VLPPVMLGSLTAILLAGTLNFVGKRYPALTGEGRLQPGEHDEMDTAKQDAEDEAGAPI
                     DVSTVAAAGLTAITLYLLGIMCHRLFGLPAPVAMLFLAVLAKLTHAVSPHLQQGGFVV
                     YKFFSTAVTYPLLFAIGVSMTPWDKLMAAFNLPNLITIVSTVVTLMATGALVGRWLNM
                     YPIEAAIINACHSGQGGTGDVAILTAANRMQLMPFAQIATRIGGAITVTLVLILLSRL
                     V"
     gene            4183..5463
                     /locus_tag="VIQ50_07745"
     CDS             4183..5463
                     /locus_tag="VIQ50_07745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014332712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP citrate lyase citrate-binding
                     domain-containing protein"
                     /protein_id="HEY9360308.1"
                     /translation="MNITGMLYGAPLLAHVEFPTSEVLGPGATEDEIQGLIDRHKLVF
                     IKPLFKGGVGKKGKSGLIGKASDLKTALAEKERLYFAEHRHGNVVAKANGVTFESGIP
                     AQHEVYFAISDSTEFRAPTMTLTHMGGVDIEELDKRQVAQVPFEALTGLKAFVVANAL
                     TDIGAPKEIISPLVQHLPKLWELVHHYGMTTLELNPIRMWPGREGRLTPVACDFKCGF
                     DRDDPRWQRLDLPDHLFTADASDFEHEVNQLRTHQGQSDVFVINPEGTILAPTFGGGA
                     NSLVTQVLGDDAIISSDFGGNPPYEKMKEVARICYKHWLKQANVLFIIGGKSNNTDIY
                     ETFRAMGDALREHFSSHGPTPLYVVVGRGGPNLVRGMGALAETCDSLNLPYRFFGFDS
                     AISEVVNYAKGVNEWMKAGGRAEIAAHLGLKPRN"
     gene            5506..8220
                     /locus_tag="VIQ50_07750"
     CDS             5506..8220
                     /locus_tag="VIQ50_07750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014332711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HEY9360309.1"
                     /translation="MFKRGIEGFPYYLGIGALERIATREDRVCVLNILGGESRQVTPV
                     SHAFSGGNVVFGTSPGRHGQVLPTPAGAIPVYNNVREGLDDGHAFNTGVVYLPPSGVR
                     DGVAELVRINPQLEKIVMITEKISVHDAREIRALGQANGVDIFGANCLGVADSWNRVR
                     IGGALGGDNPQEVLLKGSVAIFSNSGGFTTTIAQYLGTEGWGTTTLISSGKDVYIHYA
                     ARDFTHAFNHDIRSKAAVLYAEPGGYYEHGVEFSKPVVACIVGRWKSKLTRAVGHAGA
                     MAGSGDRAEDKERWFMESFGVDQIFTPENPVASAKGAVVVNIAHIPLALTAVMKLNNV
                     RSDFAPRGSLSLKPWVANDQGIKLPAHLALPTVEAVLPYNEQIKTLARQVGAVIARQN
                     MKDKSGASVMDPKTQVTSVHGHSVLDLAVLPLEANFALPLVHEIASANDRVMLDIAVA
                     AETNLVGDPALMAAEAAREAGNSPNTIIAAAAAIIGPKRVQRSLASAARLIDLFAHSG
                     LLDARDEAFDCSGITVDESTRALFSAAAAEADDPRPEAMLKAVRDRGGKSLFLRFVES
                     LGARPSRDAILAAVSTTIAWGPLMRKRISRLTAETLPWYLRLYGVMIGASIPARHHQH
                     GSLCGISREERFSRWGMADVLFLALTGKKPTQAEARPLQILIGLLISNGPGSISAQGA
                     KGAVAADGPQTPSRVQINKAMVGFLTHSGYSHGGNGFEGMAFLLEQFKDAGLKDPTDR
                     NHGLDLKSMATRFAEVYKEEKSQSKESGLEGPRALPGVHHPIFKGKPVNYDPRERFIA
                     EFMAERGDYNAFHAFYRELVQALYDTGATRYVFCVNVDAVIAALLLAVLWKDYRSGVL
                     SEKDLETAAFNVFLYGRMIGAAAEIDDHLNRGRNMDTRTPQEQCAFVV"
BASE COUNT         1613 a         2671 c         2632 g         1595 t
ORIGIN      
        1 gactggacag aacggcgcta ccatctcgcg ggccatgtgg gcgcctgcct gctgcgcctt
       61 tgcgtcaacc ggagctggat cacgcgccac cgcgacagcc gcgcggtaac gatcacgccg
      121 gcaggcgagg tgcagatgcg tacgattttt ggactggctt tagctgaagc ggaaaacact
      181 gcggtcccca gtcactaaac gcgcaggctc caagctcgcg gttatcgctc gtgctcaacg
      241 gcatccaggg gatgcaagac acggtgctga tcgtggcatc gaagcgagcc gaggatcggt
      301 tgccgattta cacgacgccg tcgccggccc cacctacggg cacagcgctc ctgtgtcgat
      361 ccacgcctgg accaattctc cgagcagcgc ctgcgagcca ggggctgggt cgcgtccggc
      421 gcccggctgc caaccccatg caaccagatc gtcgtgcgcc aggtgctcgt gcaacagcga
      481 aaggttgcga ccgccattgc ggtcgggatc cttgatctgg cgacaaatct cgcccaccga
      541 cttgccctcc catgccatct cgattggcgc ggccatccaa cgcgggtggc ccggaatgct
      601 ttgataggat acccgctcgt gcagcgtgaa gttctggtcg gtgtgacagg tgacgcaggg
      661 ggtttctcgc gtcgccagcg gctgatgcgg atgctcgtcg ttgccctgcg ttagacgatt
      721 cgtcgcggga tggcagttta tgcagcgcgg atgcgtcagc accttggcca cctcggcgaa
      781 aaaggcacgg gagcgctggg caggatcgga gatccccgcg aatgcggccg gcggctgcaa
      841 tgtgttggca ggttgggcgg agccagagac cgacgcggct accatcatgc agcacagcaa
      901 agcaatggtg gatcccggtc gcatgagcct gatgcctccg accgaagata acttttcgag
      961 gctgcaaaag ttcatttcgc tgaggcaata ttcgaagaaa ctgcatccac atgccgaccg
     1021 ctgctaaagg acccgacaat gactgacccc taccggccca aagggctttc aagcgccgtg
     1081 tgctatcaag atgcgaaggc cgcctttcgc tggctcgaag cggcgttcgg gttcgagccg
     1141 ctcttcgtca tactcggccc cgacggcagt ctcgctcatt cggagatgac cttcgggaat
     1201 tccgtcgtca tggtcggcaa cgagtggagc gccgatcata agagtccgaa atccatcggc
     1261 ggcgagaaca cgcagaccgt ccacgtccag ctcgcgcaag gcgaggatat cgacgcccat
     1321 tgcgagcgcg cgcgcaaagc gggcgcgggg attctgcagg agccccagac tcagttctac
     1381 ggcgaccgaa cctatcgcgc ccgcgacccg gaaggccata tctggacctt cggcgtcacc
     1441 gagaaaagaa tgacgccgga agagtgggac aaggcgagcg gcctcaccac gaagaaacgg
     1501 cttgattgaa cgcccgcatc gacaagacct tcgcggcgct cgccgaccgc atcgccgcta
     1561 cgcggtcgaa ctgcactcct ttggcattgc aggttttgcg attgccaaga acggcagaat
     1621 ggtgcgatgc tcgcgaggga gtgcagttct tcggtagtgt ccatggcgga actgcaatac
     1681 aaccgtcggg ctttcaccgc ggggatggca agcctgctct gcccggtctc tctcgattta
     1741 gcccgtgctc aacagcttga acgctcctcg ctcaagcttg gcgtcgccaa caaggcgcat
     1801 ctctattact tgccggtgac gatagccgac aggcgaggtc acttccgcga ctacggtctc
     1861 accgtcacca tgaccgactt cgaaggtggc gggcaggcgt tcgatgccct gctcgccggc
     1921 gccgtcgacg tcgcggcagg cgcgtacgaa catacattgc gcgcacaggc catgggacag
     1981 gatgtccgcg ccgtcatcga gctcggtcgg tttcccggcg tggtgcttgc tgtgggcaag
     2041 gaccggccct tcaagtcgat ttccgacctc aaaggcctca acatcggcgt gaccgccccg
     2101 agctcttcca gccacttctt tgtgctctat ctgatggcca aggccgggct tgcgccggat
     2161 gacgtctcgt tcgtcggcgt gggaggtggc gaacgggccg tcgaagcgat gaagacgggc
     2221 gagatcgatg cgatctccaa cctcgatccg gtgatcaccc gtctgcagca ggacgggacg
     2281 atacggatca tcgtcgacag ccgcttgccg cggacaaatt acgacatctt cgggggcacc
     2341 aatccggcag cggtactcta tggccgggag gaattcatcg tcgccaatcg agccacgatg
     2401 caggcgctgg tcaacgcgtt ctacaagacg ctgcgatgga tcgcgaccgc caccacggac
     2461 gagatcgtgg ataccgtgcc ggccgaatat tttctcggcg accgagcagt ctacgtcaaa
     2521 gcgctgcggg caaacctgct tgtctattca agaaccggga tcatcacccg ccagggaatg
     2581 aacagcgcgc tcaagatgat ggccacattc gatcccgacc tgaaggacag gaagatcgat
     2641 ctgcaacgga ccttcgacga ccgcttcatc acgcgcgcgg cggtcctttt cgacgatccg
     2701 acgaacagcg acctggcgac ggacgagcgt cgccccgaga tcgacccgac gtttcgcgac
     2761 tgatgacaag ccgataacaa ggcgtcgcgt tgaaaagcag acctggagcg gaccatgcag
     2821 cagagcgtct ccatctcggc atcgccggaa ttgttgcacg cacgatggtg gccgcaaggg
     2881 tggtggcgaa tcgtcgacat gcggatcggg atcattccga tcccgatcta cgtgatactc
     2941 gtcgcgcttc tggcgggctt cacttacacc ggcgacatca agggcgagat ctccatcatg
     3001 atcgccatcc tggtgatcgg cggcttcacc tgcgcggaga tcggcaaacg cacgcccgtg
     3061 ctgcgcaaca tcggggcggc cgcaatcttt gcgactttcg tcccctcggc gctcgcgtat
     3121 tacaagctgc tgccgccgca gctcgagaaa tccgtcgttg aatttaccaa gtataccaac
     3181 ttcctctatc tgttcatcgc ctgcatcatc gtcggcagca tcctgggcat ggaccgcaag
     3241 gttctggtgc aaggatttct gaagatattc gtgccgctgg tggttggctc gatcaccgcc
     3301 gctatcgtcg gcacgctggt cggtacgctg cttgggctgg gcgccttcaa cacgttcttc
     3361 ttcgtggtga ttccgatcat ggccgggggt atcggcgagg gcgcgattcc gctctccgtc
     3421 ggctatgcgg aaattctcgg ccagccccac ggtgacatgt tcgccctggt cctgccgccg
     3481 gtgatgctcg gcagcctcac cgcgatcctc cttgcaggta cgctcaactt cgtcggcaag
     3541 cgttacccgg cgctgaccgg cgaaggtcga ctgcagcccg gcgagcacga cgaaatggat
     3601 accgccaagc aggatgccga ggacgaggcg ggtgcgccga tcgatgtcag caccgtcgca
     3661 gccgcgggcc tcacggcgat cacgctatat ctgctcggta tcatgtgcca ccgactgttc
     3721 ggattgccgg cgccggtggc catgctgttc ctcgccgtgc tcgccaagct cacgcacgcg
     3781 gtgtcaccgc acctgcaaca gggcggtttc gtcgtctaca agttcttctc caccgcggtc
     3841 acgtatccgc tgttgttcgc cataggcgtg tcgatgacgc cttgggacaa gctgatggcc
     3901 gcgttcaatt tgccgaacct catcaccatc gtcagcacgg tggtgacgct gatggccacg
     3961 ggagcgctag tcgggcgctg gctcaacatg tatccgatag aggccgccat tattaacgcc
     4021 tgtcacagcg gccagggcgg cacgggcgat gttgcaattc tcacggcggc gaaccggatg
     4081 caactcatgc cgttcgcgca gatcgcaact cgcatcggcg gcgcaatcac cgtcaccctt
     4141 gtgctgatcc tgttatcgcg gctggtctag gcggacccga ccatgaacat caccggcatg
     4201 ctttatggtg cgccactgtt ggcgcacgtc gagtttccca catccgaagt gctcgggccc
     4261 ggtgcgaccg aggacgagat ccagggcctg atcgatcgcc acaagctggt gttcatcaag
     4321 ccactgttca aaggcggcgt tggcaagaag ggcaagtcag gcttgatcgg caaggcgagc
     4381 gatctcaaga cggcgctcgc cgagaaggag cgcctctact tcgccgagca ccgccatgga
     4441 aacgtcgtcg ccaaggcgaa tggggtgacc tttgaaagcg gcatccctgc ccagcacgag
     4501 gtctattttg caatctcgga ttccaccgag tttcgcgctc ccaccatgac gctcactcat
     4561 atgggcggcg tggacatcga ggagctcgac aagcggcaag tcgcgcaggt gccatttgag
     4621 gcgctgaccg ggctcaaggc cttcgtcgtc gccaatgcgc tgaccgatat cggcgcgccc
     4681 aaggagatca tctctccttt ggtccagcat ctgccaaagc tttgggagct ggtgcaccac
     4741 tacggtatga cgacactgga gctcaacccg atccgcatgt ggcccggccg cgaagggcgt
     4801 ctcacgccgg tcgcctgcga cttcaagtgc ggcttcgatc gcgacgatcc gcgctggcag
     4861 cgcctcgatc tgccggatca tctgttcacc gccgatgctt ccgacttcga gcatgaggtc
     4921 aatcagctgc gcacccatca gggtcagtcc gacgtgttcg tcatcaatcc cgaggggacc
     4981 atcctggcgc ccactttcgg cggcggcgcc aactcgctgg tgacacaggt cttgggcgac
     5041 gacgcgatca tctcgtccga tttcggcggc aatcctccct acgagaagat gaaggaggtc
     5101 gcccgcatct gctacaagca ctggctcaag caggccaatg tgctgttcat catcggcggg
     5161 aagtcgaaca acaccgacat ctacgagacg ttccgggcga tgggtgatgc gctgcgcgag
     5221 cacttcagca gccacggtcc cacgccgctc tatgtggtgg tgggacgcgg cggccccaat
     5281 ctcgttcgcg gcatgggggc gctggccgag acctgcgact cgctcaatct cccctaccgc
     5341 ttcttcggtt tcgacagcgc catctcggaa gtcgtcaact acgccaaggg cgtcaatgaa
     5401 tggatgaagg ccggcggtcg tgccgagatc gcggcgcatc ttggattgaa gccgcgcaac
     5461 taaattaaat agcaacgctg cgggccggca ggagggcggg cgggcatgtt caagcgaggc
     5521 atcgagggtt tcccctacta tctcgggatc ggcgcgctcg agcggatcgc cacgcgcgag
     5581 gatcgggttt gcgtcctcaa cattctgggc ggcgaatcgc ggcaggtgac gccggtgagc
     5641 catgcctttt ccggcggcaa cgtcgttttc gggacgtcgc cgggccgcca cggccaggtt
     5701 ctgccgacgc cggccggcgc gattcccgtc tacaacaatg tccgcgaagg gctcgatgat
     5761 gggcacgcgt tcaacaccgg cgtggtctat ctgcctccat ccggcgttcg cgacggcgtc
     5821 gccgagctag tccgcatcaa cccgcagctc gagaagatcg tgatgatcac cgagaagatc
     5881 tcggtgcatg acgcgcgcga gatccgcgcg ctcggccagg ccaacggcgt cgacatattc
     5941 ggcgccaact gcctgggcgt ggccgattcc tggaatcggg tccgcatcgg cggcgcgctc
     6001 ggcggggaca atccccagga agttctgctc aaggggtcgg ttgcgatttt ctcgaactcc
     6061 ggcggcttca ccaccaccat cgcgcaatat ctcggtaccg aaggctgggg gacgaccacg
     6121 ctcatctcct ccggcaagga cgtctatatc cattacgcag cacgcgactt cacgcacgcc
     6181 ttcaaccacg acattcgcag caaggcggcg gtgctttatg ccgagcccgg cggctattac
     6241 gagcatggag tcgaattcag caagccggtc gttgcctgca tcgtcggccg ttggaagtcg
     6301 aagctgacgc gagcggtggg acatgccggc gccatggccg gctcaggcga cagggccgag
     6361 gacaaggaac gctggttcat ggagagcttt ggcgtcgatc aaatcttcac gcccgagaac
     6421 ccagtggcgt cggcaaaggg cgccgtcgtg gtcaacatcg cccacattcc cctggcgcta
     6481 acggcggtga tgaagctcaa caatgtgcgg tcggatttcg cgccgcgcgg cagcctttcg
     6541 ctcaagccct gggttgcgaa cgaccagggg atcaagctgc ccgcgcacct cgccttgccg
     6601 acggtggaag cagtcctgcc ctacaacgag cagatcaaga ccctcgcccg ccaggttggc
     6661 gcggtcattg cgcgccagaa catgaaggac aagtcgggcg cgtcggtcat ggaccccaag
     6721 acgcaggtga cgagcgtgca tggtcactcc gtcctcgatc tcgcggtcct gccgctggaa
     6781 gccaatttcg cgctgccgct ggtgcatgag atcgcgagtg cgaatgaccg cgtgatgctc
     6841 gacatcgcgg ttgccgcgga aaccaatctt gtcggcgatc ccgcgctgat ggcggccgag
     6901 gccgcgcgcg aagccgggaa ttcgccaaac accatcattg ccgccgccgc ggcgatcatc
     6961 ggtccaaagc gggtgcagcg ctcgctcgcc tccgcggctc ggctcatcga tctgtttgcc
     7021 cactccggct tgctggatgc ccgcgatgag gccttcgatt gtagcgggat cacggtcgat
     7081 gaaagcacgc gcgcgctttt ctccgctgcc gccgccgagg ccgacgaccc ccgtcccgag
     7141 gccatgctca aagcggtgcg cgatcgcggc ggcaagtcgc tgttcttgag attcgtggaa
     7201 tcgcttggcg cgcggccgtc gcgcgacgcc atcctggcgg cggtctcgac gaccatcgcc
     7261 tggggcccat tgatgcgcaa acgcatctcg cgactgaccg ccgagacgct gccctggtac
     7321 ctgcgtctgt acggcgtcat gatcggcgcc tcgattcccg ccaggcacca ccagcatggc
     7381 agcctgtgtg gcatttctcg cgaggaacga ttcagccgct ggggcatggc ggatgtgctc
     7441 ttcttggctt tgaccggcaa gaaaccaacg caggccgagg caagaccgct gcagattctt
     7501 attggccttc tgatctcaaa cggcccgggt tcgatatcgg cgcagggcgc aaaaggtgcg
     7561 gttgccgccg acgggccgca gacgccgagc cgcgttcaga tcaacaaggc catggtcggc
     7621 tttctcaccc acagcggcta cagccacggc ggcaacggct tcgaggggat ggcgttcctg
     7681 ctggagcagt tcaaggacgc cgggctgaag gatccgaccg accgcaatca cggcctcgac
     7741 ctcaagtcaa tggcaacgcg ctttgccgaa gtctacaagg aggagaagtc gcaatcgaag
     7801 gagtctgggc tcgaaggtcc gcgcgccctc cccggggttc accacccgat cttcaagggc
     7861 aagcccgtca attacgatcc gcgcgagcgc ttcatcgccg agttcatggc ggagcgcggc
     7921 gactacaacg cctttcacgc tttctaccgc gagcttgttc aggcgctgta cgacaccggt
     7981 gcgacgcgct acgtgttctg cgtcaacgtc gatgcggtga tcgcagcgct cctgctcgct
     8041 gttctttgga aggactatcg ctcgggcgtt ctgagcgaaa aagacttgga gaccgcggcg
     8101 ttcaatgtgt tcctctatgg ccggatgatc ggcgcggcgg cggaaatcga cgaccacctc
     8161 aatcgcggcc gcaacatgga tacgcgcacg ccgcaggagc agtgcgcatt cgtggtttag
     8221 agttgaatta tagatgtttc ggtcggatgg gcgtctcggg atcacactat aggagatcca
     8281 gagcgcttgg taccaccggg ccatagttca gcgcgtagta tttcgcaaaa gttatcggtc
     8341 ggccgaatcg gcggagatgt acgagcctcg acgatcagga gcgccgatca agcggattat
     8401 gctctatcca ggagaccgct tgttcaacga gagcaaaata gtcgtcaagc agtttctcag
     8461 ctcgcgcacg agtaggcttt gaaaccttca ttgctgcagt ggtcgactgg a
//
LOCUS       DATCWM010000400         8891 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_62342, whole genome shotgun sequence.
ACCESSION   DATCWM010000400 DATCWM010000000
VERSION     DATCWM010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8891)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8891)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8891
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62342"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..700)
                     /locus_tag="VIQ50_07755"
     CDS             complement(<1..700)
                     /locus_tag="VIQ50_07755"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEY9360310.1"
                     /translation="MSQSAQVVAGHYGRRALGDVILRALKESGKDVEHLTPDDLAPVD
                     EFHSGGRNATARLAQLAQIDASQRVLDVGCGIGGPSRYLASKFGCQVTGLDLTPEFVA
                     LAGMLAQRTRLADKVTYRQGNALDLPFPDANFDVVWSQNAAMNIADRDRLYGEMHRML
                     RPGGRLALQDVAAGPGGEPYYPTPWASDKSISFLFAPQSTRAALERVGFRVVAWQDTT
                     QEALEQQTARAKALD"
     gene            complement(775..1551)
                     /locus_tag="VIQ50_07760"
     CDS             complement(775..1551)
                     /locus_tag="VIQ50_07760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012706255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HEY9360311.1"
                     /translation="MSEPIWNKFLTERDKAVFATSGYGARGGFGKRPALLIIDVNYAF
                     CDERPTPILESIKRWRNSCGEDAWVAMPYLKALIDKARAKGIPVIYTTGVRREDNWDS
                     GSWIWKNDRSDEDRSSRPATNVDGNDIVAEIAPAPQDIVVLKQKPSGFFGTNMASYLT
                     LLGCDSVIVTGTTTSGCVRATVLDAFSLNYRIALAEEGCFDRSQASHAINLCDMNAKY
                     ADVVKTSEVLAFFDSLPNGMFDLPKGTAALAPKPRLAANM"
     gene            complement(1599..2609)
                     /locus_tag="VIQ50_07765"
     CDS             complement(1599..2609)
                     /locus_tag="VIQ50_07765"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9360312.1"
                     /translation="MNRRKFLQSTAKLGTGLGLAVAAPPFVARAASKELLVAEPVHST
                     GYLPMYIAMANGYFAESDIVVKIVTIETGGGHTNAVLSGQAFAFIGGPEHNAFAKAKG
                     AELRAVVHCVDRGNVYLCAAKGHDPKDRDWPNYFKGKSIAVGAYGGTPNSIMRYLLAK
                     WKLDAKRDVTLIEVANSAVPAAVRAGQAVVGNTTEPMVTQGIRQNLWGEPFFNVPKEL
                     GPYAYSTINVRLDSIQKEPEVVRGFVRGMVKGLKFLYANPSEAAEIAKKQFPTMALDD
                     LKATLDRSFSDQMWSKDGMISKEAWATGSAVVREAGILKTDVKYEEIIDMSFVESVRA
                     SL"
     gene            complement(2642..3409)
                     /locus_tag="VIQ50_07770"
     CDS             complement(2642..3409)
                     /locus_tag="VIQ50_07770"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9360313.1"
                     /translation="MQRDWPTWALVAAQIGILVGALSLWEIGARTGWIDAFFWSQPSA
                     IAETMTVFFTTGDAWTDISFTFRSTIIGFLIGTAAGSLLGLSFWWSRNYAAVVQPYVI
                     CLESIPKLALAPLIILVFGIGLVSKVAVATALTLVVSTLTAYAGVKALDPDGEKLFYS
                     LGASRLQVFRKLVIPFCLPWIISVLRVNIGLALTGAIVGEFIASQHGLGRAILYAGQT
                     YDIALVWVAVLVLSTLAIVMYAAVSWVESLLRKGVRQ"
     gene            complement(3540..4340)
                     /locus_tag="VIQ50_07775"
     CDS             complement(3540..4340)
                     /locus_tag="VIQ50_07775"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9360314.1"
                     /translation="MSPSAPKLCVADVSMTFKTPAGAFHALAPVTLSIPQGRFVSLIG
                     PSGCGKSTIFNIIAGLLEPTGGRVLIDGIDATGTIGRVGYMLQKDLLLPWRTVLDNVI
                     LGMEIQHVPLRAARERALPLLHRYGLAGFEYLYPSALSGGMRQRAALLRTLLFDTDLI
                     LLDEPFGALDAQTKLKMQEWLMQLWSDFGKTVLFVTHDVEEAIYLSDEVHVMGTRPGR
                     IIATIPVPLARPRVRGSVLSGEFLAIKERCLELLHLDPTASDAVNEAA"
     gene            complement(4447..5613)
                     /locus_tag="VIQ50_07780"
     CDS             complement(4447..5613)
                     /locus_tag="VIQ50_07780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEY9360315.1"
                     /translation="MYAPAGVKTSTDYPIPDAMKAWVLGDPGQLSLREKPVPVPKKAE
                     VLVRIDAVAICATDLEIIYHGPPALIRGGLPHNKNFTPGHEYMGTVVALGPGVDEYRI
                     GQRVTVEIHAGCGQCKRCREGMYTACHNYGLNYGEVDKGHRANGFTTDGGFCEYQVNN
                     INTLVAIPDTMSDEEATLVVTAGTAMYGLTELGGLVAGESVVVTGPGPIGLLGVAVAK
                     ALGAQPVILTGTRDNRLAIGRELGADHVVNVRSEDAVAAVRRLNRGKGVDYVLECSGA
                     PNAVNEAVRMVNRGGKICLAAFPHQETPVDIAEIVRNNIYVYGIRGEGKSATHRAEAF
                     MSQGRFEATKIHTHTFPLEDLPTAIRYAKDRIEDAIKVVVKARGVSAVHKVAAE"
     gene            complement(5766..6734)
                     /locus_tag="VIQ50_07785"
     CDS             complement(5766..6734)
                     /locus_tag="VIQ50_07785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9360316.1"
                     /translation="MRRMFAPALAAALVFAAAAAHAQEPWPQRPVTIIVPFAAGGSAD
                     LLARILQQHLQAKFGVPFVVENKSGAGGSIGTGFVAKAPADGYTLLVGTVSSIAINAF
                     LYTKLNFDVARDLQPVSLLVRFPNLLFVNTKTPVRSVPELIGYLEANNGKTNYGSSGI
                     GTSSHLSSVMFELAINTKMTHVPFRSTAEVVNSMLGGNIDLAIDSMTTVWPFAAAGNV
                     RALAVTTPERSTAAPDLPTIGETLKGYEATAWQGLFAPAGTPRPILDKIAAEVRGVWA
                     LPEVVTALKNVGAEPAASSPDEFTAYTAAERVRWGEVVKASGVKID"
     gene            complement(6773..7303)
                     /locus_tag="VIQ50_07790"
     CDS             complement(6773..7303)
                     /locus_tag="VIQ50_07790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY9360317.1"
                     /translation="MSVARHPRPPELVDVPVEDIMQKYVGRFREKKPDWAAFEDAKVE
                     GYKRAQHRFIGAGGSGKHGDPTVIPAKNFTLSVMYVEPGQGNAAHTHEVEECFFVLKG
                     HLDVFVEDEGGKRLTTRLGPWECISCPAGVIHGYQNDSLEPVYFQVMLGRAKPETMGY
                     ADEDLYKRRDAHLKAV"
     gene            complement(7394..>8891)
                     /locus_tag="VIQ50_07795"
     CDS             complement(7394..>8891)
                     /locus_tag="VIQ50_07795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY9360318.1"
                     /translation="PFAARLTGRPVKWTEDRRENLMCINHAREAECEVEIACTREGTI
                     LGLRGHAYVDVGAYMRTNGAVGARNVAQFMSGPYRIPNIDIDVALQLTNKTPVGTYRG
                     PGRFETDFFRERLFDMVAQDLGLDRVAFRRRNLVSKQEMPYQIATITPFESKDEFDSG
                     DYQATLDRCLDEVNWPEKSKLAGKLIDGRYHGLAVGCFIEGGAAGPKESARIVLERDG
                     LYSVYVGSSAIGQGLETVFAQIAADALEVTIERIRGVFHGSTSYVNDGYGAYHSRSVV
                     MGGSAILDAAAKLRDAIRTWAAQRLNCQASAIEIVEGVKAVGPGGNSIALNELSGESI
                     SAEGAFLNKKHTYTYGAHAAHVAVDPKLGHVDLLDYVVVADCGRIINPLTVHGQTVGS
                     VVQGLGGAMMEHLVYDQDAQLLTGSLADYLIPTASDFPNIRAVMLEQHPSPINPLGAK
                     GAGEGGIIAAGGIMANAVANALSALHVQPRELPLTPTRIWELVQAAPR"
BASE COUNT         1544 a         2786 c         2909 g         1652 t
ORIGIN      
        1 tgtcgagggc tttggcgcgc gccgtctgtt gttccagtgc ctcctgcgtc gtgtcctgcc
       61 aagcgacgac ccggaaaccg acacgctcga gcgcggcccg cgtcgactgc ggcgcaaaca
      121 gaaagctgat gctcttgtcg ctcgcccacg gcgtcgggta gtacggctcg cctccgggac
      181 cggcggcgac gtcctgcagc gcgaggcgtc caccgggcct cagcatgcga tgcatctcgc
      241 catagaggcg atcgcgatcg gcaatgttca tcgccgcgtt ctgcgaccac acgacgtcga
      301 agttcgcgtc gggaaacggc aagtcgagag cgtttccctg tcggtaggtg accttgtcgg
      361 cgagccgggt gcgttgcgcg agcattccgg caagcgcgac gaattccgga gtcagatcga
      421 ggccggtgac ttggcagccg aacttgctgg cgagatagcg cgagggcccg ccaataccgc
      481 agccgacgtc gagcacgcgc tgggaggcgt cgatctgggc aagctgcgcc agccgcgcgg
      541 tcgcattgcg gccgcccgaa tggaactcat cgaccggcgc gaggtcgtcc ggcgtaaggt
      601 gctcgacatc ctttcccgat tccttcagcg ccctcaggat gacgtcgccg agggcgcgtc
      661 gcccgtagtg gccggcgacg acctgtgctg actgtgacat gccgagcctt accgccgttc
      721 aacccggttc gaggttagag cgctccccgc cgcacctggt gccgctgcgc atggttacat
      781 gttcgcggcg agccgcggct tcggtgccag cgcagccgtt cccttcggca gatcgaacat
      841 gccgttggga agactgtcga agaaggcgag cacctcggac gtcttcacca cgtcggcgta
      901 tttggcgttc atgtcgcata ggttgatggc gtggcttgcc tgggaacggt cgaagcaccc
      961 ctcttcggcg agcgcaatgc gataattgag actgaacgca tcgagcaccg tggcgcgcac
     1021 gcagcccgac gtggtcgtgc ccgtgacgat cacgctatcg cagcctagca gcgtgagata
     1081 gctcgccatg ttggtgccga agaagccgga cggcttctgc ttcaatacca caatgtcctg
     1141 cggcgccggc gcgatctcgg cgacgatgtc gttgccgtcg acgttggtcg cgggcctgct
     1201 ggagcggtcc tcgtcggagc ggtcattctt ccagatccag cttccgctat cccaattgtc
     1261 ctcgcgccgc accccggtgg tgtaaatgac cgggatgccc ttggcacgcg ccttgtcgat
     1321 cagcgccttg agataaggca tggcgaccca ggcgtcctcg ccgcaggaat tgcgccaacg
     1381 cttgatcgat tcgaggatcg gggtggggcg ctcgtcacag aacgcgtagt tcacgtcgat
     1441 gatcaagagc gcggggcgct tgccgaatcc gccgcgtgcg ccatagccgg acgtcgcgaa
     1501 taccgctttg tcgcgctcgg tgaggaactt gttccaaatg ggctctgaca tggtcgtggt
     1561 tcccggttgt cgtttggttc agttgctcga ttgatcgttc acaggctcgc gcgcacgctt
     1621 tcgacgaagc tcatgtcgat gatctcctcg tatttcacgt cagtcttgag aatcccggct
     1681 tcgcgcacga ccgcgctgcc ggtagcccac gcttccttgc tgatcatgcc gtccttgctc
     1741 cacatctgat cgctgaacga gcggtcaagc gtcgctttga ggtcatcgag cgccatggtg
     1801 ggaaattgtt tcttggcgat ctccgcagct tcagagggat tggcgtaaag gaatttgagc
     1861 cccttgacca tgcctctgac gaacccgcga accacctcgg gctccttctg gatcgaatcc
     1921 agacgcacgt taatggtgga ataggcgtaa gggccgagtt ccttgggcac gttgaagaac
     1981 ggttcgcccc agaggttctg gcggattccc tgcgtgacca tgggctcggt ggtgttgccg
     2041 acgacggctt ggccggcccg caccgcggct ggcaccgccg agtttgccac ctcgatcagc
     2101 gtgacatcgc gtttggcgtc gagtttccac ttggccagca gatagcgcat gatcgagttc
     2161 ggcgtgccgc cataggcgcc caccgcaatc gacttgcctt tgaaataatt cggccaatcc
     2221 ctgtctttgg ggtcgtggcc cttggcggcg cagagataga cattgccgcg gtcgacgcag
     2281 tgcacgactg cgcgcaactc cgcgcccttg gctttggcaa aggcattgtg ctcggggccg
     2341 ccgatgaagg cgaaggcctg gcctgaaagc acggcgttgg tgtgaccgcc gccggtctcg
     2401 atggtcacga tcttcaccac gatgtcggat tcggcgaagt agccattcgc catcgcgatg
     2461 tacatgggca aatagccggt cgagtgcacc ggttcggcga ccagcagctc cttgctggcg
     2521 gcgcgtgcga cgaagggtgg ggccgcaacg gccaggccga ggccggtgcc gagctttgcg
     2581 gtcgactgca ggaattttcg cctgttcatg acgtcctcgc cgttggagtg ttgcattcgg
     2641 gttattgccg cacgcccttg cgcagcaagc tttcgaccca ggacaccgcg gcgtacatga
     2701 cgatcgccaa ggtggagagc accagcaccg ccacccagac cagcgcgatg tcataggtct
     2761 gaccggcata gaggatcgcc cggccgaggc catgctggga ggcaatgaac tcgccgacga
     2821 tggcgccggt caaggccagg ccgatattca cccgcagcac cgagatgatc cagggcaggc
     2881 agaacgggat gacgagcttg cggaacacct gcaggcgcga ggcgccaagc gaatagaaca
     2941 gcttctctcc gtcgggatcg agcgccttca cgccggcata ggcggtcaac gtcgagacca
     3001 ccagcgtcag cgcggtcgcg acggcgacct tggagacgag accgatgccg aacaccagga
     3061 tgatgagtgg cgccagcgcc agtttcggaa tggactccag gcagatcacg tacggctgga
     3121 caaccgctgc gtagttgcgc gaccaccaga acgagagccc gagcagcgag cctgccgcag
     3181 tgccgatgag aaagccgatg atggtcgagc ggaaagtgaa gctgatgtca gtccaggcgt
     3241 cgccggtggt gaaaaacact gtcatggtct cggcgatggc gctcggctgc gaccagaaga
     3301 aggcgtcgat ccagccggtg cgggcgccga tttcccacag cgaaagcgcg ccgaccagaa
     3361 tcccgatctg cgcggcgacg agcgcccagg tcggccaatc cctctgcacg ggcaggcgcc
     3421 gcaccggctt gcctgctggg gtgtcggttt gatgtcgtgc ctgcgcccga tggaggctcg
     3481 ccatggcgcg ggcgcggagc gcgggagtgg tgtcctgagc cgtcatcgcc tgccgctgtc
     3541 taggctgctt cgttgacggc atcggatgcc gtcgggtcga ggtggagcaa ttcgaggcag
     3601 cgttccttga tggcgaggaa ttcgccgctg agcacgcttc cccgaacgcg cggacgagca
     3661 agagggaccg ggatcgtcgc gatgatgcgg cccggccgcg tgcccatcac gtggacctcg
     3721 tcggagagat agatcgcctc ctcgacgtca tgggtgacga acagcacggt cttgccgaag
     3781 tcgctccaca gttgcatcag ccattcctgc atcttgagct tggtttgggc gtcgagcgcg
     3841 ccgaacggct cgtccagtag aatgagatcg gtgtcgaaca atagcgttcg caacagcgcc
     3901 gcgcgctggc gcatgccgcc ggagagcgcg ctcgggtaga gatattcgaa accggccagg
     3961 ccatagcgat gaagcagcgg cagcgctcgc tcacgcgccg cccgcaacgg cacgtgttga
     4021 atctccatgc cgaggatgac gttgtccagc accgtgcgcc aaggcagcag taggtccttc
     4081 tgcagcatgt agccgacacg gccaatcgtg cccgtggcgt cgatgccgtc gatgagaact
     4141 cggccgccgg tcggctccag caatcctgcg atgatattga atatggtgct tttgccgcag
     4201 cccgaggggc cgatcagact gacaaaccgg ccttgcggaa tcgaaagcgt caccggcgcg
     4261 agcgcgtgga acgcgccggc cggcgtcttg aacgtcatgc tgacgtcggc aacgcaaagc
     4321 ttcggggccg agggcgacat gcgtactccg cgcgacggtg tcgcggatcc cttcagcgac
     4381 tatatcgcaa aaaccgtgcc agccgccatg gccttcacct cagggagact cttcgcgagc
     4441 ggaacttcac tctgccgcta ccttgtgcac ggcggatacg ccgcgcgcct tcaccacgac
     4501 cttgatggcg tcctcgatgc ggtccttggc atagcggatc gcggtcggca ggtcctccag
     4561 ggggaaggtg tgcgtgtgga tcttcgtggc ttcgaaccgc ccctgactca tgaatgcttc
     4621 ggcgcggtgg gtggcgcttt tgccttcgcc gcggatgccg tagacgtaga tattgttgcg
     4681 cacgatctca gcgatatcga ccggcgtctc ttggtgcggg aaggcggcga ggcaaatctt
     4741 gccgccgcgg ttgaccatac ggaccgcctc gttcacggca ttgggcgcgc ccgagcactc
     4801 gagcacgtag tcgacgccct tgccgcggtt gagccggcgc accgcggcga ccgcgtcctc
     4861 gcttcgcacg ttgaccacgt ggtcggcgcc aagctcgcgg ccgatggcga gccggttgtc
     4921 gcgggtgccg gtgagaatga cgggctgcgc gccgagcgcc ttggcgacgg cgacgccgag
     4981 aagcccgatc ggaccgggcc cggtcaccac cacgctctcg cccgcaacga gtccgcccag
     5041 ttcggtgagc ccatacatgg ctgtgccggc ggtgacaacc agcgtcgcct cctcgtccga
     5101 catcgtatcg ggaatcgcaa cgagcgtgtt gatgttgttg acctgatatt cgcagaagcc
     5161 gccgtcggtg gtgaagccat tggcacggtg gcctttatcc acttcgccgt aattgagccc
     5221 gtagttgtgg caggcggtgt acatgccctc gcggcagcgc ttgcattggc cgcagccggc
     5281 atggatttcg acggtgacgc gctggccgat ccggtattcg tcgacgcccg gcccgagcgc
     5341 gaccacggta cccatatatt cgtgcccggg ggtgaagttc ttgttgtgcg gcaggccacc
     5401 gcgaattaac gccggcgggc catggtagat gatctcgaga tcggtcgcgc agatggcgac
     5461 ggcgtcgatg cgcaccagga cttccgcctt tttcggcact gggacgggct tctcgcgcaa
     5521 cgaaagctgc ccgggatcgc cgagcaccca cgccttcatg gcgtccggga tcgggtaatc
     5581 cgtgctcgtc ttgactccgg ctggtgcgta catttcgagt tctcccgggc cgtgccgtat
     5641 cccgctgcta gcggacgcag atgcaaccga tccggccgca gattagtgca tatgttctcg
     5701 atattcgagg ggtgcaatga ccgcatccac cggcgcagat ccgcacgagg tcaagagcag
     5761 atcgatcagt cgatcttcac gcctgaggcc ttgacgacct ccccccaccg cacgcgctcg
     5821 gccgccgtgt aggcggtgaa ttcatcgggg gaggacgccg cgggctcggc accgacgttt
     5881 ttcagcgccg tgacgacctc gggcagcgcc cagacgcctc tcacctccgc ggcgatcttg
     5941 tcgagaatcg gtcgcggtgt gccggcgggc gcaaacagcc cttgccacgc ggttgcctcg
     6001 tagcccttca gcgtttcgcc gatcgtcggc aaatccgggg ccgcggtgct gcgctccggg
     6061 gtggtgacgg cgagcgcgcg cacgtttccg gccgccgcaa acggccagac cgtggtcatg
     6121 ctgtcgatgg caagatcgat gttgccgccg agcatgctgt tgacgacctc agccgtgctg
     6181 cggaagggaa cgtgggtcat tttggtattg atcgcaagct cgaacattac cgaagagagg
     6241 tgggaggagg tgccgatgcc cgacgagccg taattggtct ttccattatt ggcctcgaga
     6301 taaccgatca gctccggcac cgacctcacc ggcgtcttcg tattgacgaa cagaagattt
     6361 ggaaacctca ccaggagcga gaccggctgc aggtcacggg cgacgtcgaa attgagtttc
     6421 gtgtagagga aagcattgat ggctatcgag ctcaccgtgc ccacgagcaa cgtgtatccg
     6481 tcggcgggcg ctttcgccac aaacccggtg ccgatgctgc cgccggcgcc cgacttgttc
     6541 tccaccacga acggcacgcc gaatttcgcc tgcaggtgct gctgcaggat gcgggcgagc
     6601 aagtccgccg agccgcctgc cgcgaacggc acgatgatgg tgactggccg ctgcggccac
     6661 ggctcctgcg cgtgcgccgc cgcggcggcg aagacgagag cggcggcgag agcgggtgcg
     6721 aacattcggc gcatgccgat ccttcaggag tgaggtccag atcaaccgga ctttacaccg
     6781 ccttcagatg cgcatcgcgc cgcttataaa ggtcctcgtc ggcatagccc atggtctctg
     6841 gcttggcccg cccgagcatg acctggaaat agaccggctc gaggctgtcg ttctggtagc
     6901 cgtggatgac gccggcgggg catgagatgc attcccaggg gcccaggcgg gtggtgaggc
     6961 gcttgccgcc ctcgtcttcg acaaacacgt cgagatggcc cttgagcacg aagaagcatt
     7021 cctcgacctc gtgggtatgc gcggcattgc cctgtccggg ctccacatac atgaccgaca
     7081 acgtgaagtt cttcgccggg atgacggtcg gatcgccatg cttgccggag ccgccggcgc
     7141 cgatgaagcg gtgctgcgcc cgcttgtagc cttcgacctt ggcgtcctcg aatgctgccc
     7201 aatccggctt cttttcgcgg aagcgtccga catatttctg catgatgtct tcgacgggaa
     7261 catcgaccag ttccggcggg cgtggatgcc gtgcaacgct catgggaggc tcctgttcaa
     7321 acagtgcaag cgctggccga atctatgctt ccaccgcaca acgcgtcaat gaagcggcca
     7381 accaccgcaa cactcaccta ggcgctgcct gcacaagctc ccagatgcgg gtcggtgtga
     7441 gcgggagctc gcgcggttgc acgtgaagtg cgctcagcgc attcgcgacc gcgttggcca
     7501 ttatcccgcc ggcggcgatg atgccgcctt cgccggcgcc cttcgccccc agcggattga
     7561 tcggggaggg gtgttgttcc agcatgaccg cgcggatgtt agggaagtcg ctggccgtgg
     7621 ggatgagata atcggcgagc gacccggtca agagctgggc gtcctgatca tagacgagat
     7681 gttccatcat ggcaccgccg aggccttgca ccaccgagcc aacggtctgc ccgtgcacgg
     7741 tcagcgggtt gatgatgcgg ccgcaatccg cgaccaccac gtagtcgaga aggtcgacgt
     7801 ggccgagctt gggatcgacc gccacgtgcg cggcgtgggc gccataagtg taggtatgct
     7861 tcttgttgag aaaagcaccc tcggcggaaa tgctctcgcc ggaaagttcg ttcaaggcga
     7921 tggagttgcc gccgggcccc accgccttca ccccttcgac gatttcgatg gccgaggctt
     7981 ggcagttgag ccgttgcgcc gcccaggtgc ggatcgcgtc gcgcagcttg gccgcggcat
     8041 cgagtatcgc cgagccgccc atcacgaccg agcgcgaatg ataggcgccg tagccgtcgt
     8101 tcacatacga ggtgctgccg tggaagacgc cgcggatgcg ctcgatcgtg acttcgagag
     8161 catcggcggc gatctgcgcg aaaacggtct ccagtccctg gccgatggcg gatgacccca
     8221 cgtagacgga atagagcccg tctcgctcga gcacgatgcg ggcgctctcc ttcggtccgg
     8281 cggccccgcc ctcgatgaag cagccgacgg cgagaccatg atagcgcccg tcgatcagct
     8341 tgcccgcgag cttcgacttt tccggccagt tgacctcgtc gaggcagcga tcgagggtcg
     8401 cttggtaatc gccgctatcg aactcgtcct tgctctcgaa aggcgtgatg gtggcgatct
     8461 ggtacggcat ctcctgtttg gatacgagat tgcgtcggcg gaacgccacg cgatcgaggc
     8521 cgaggtcctg cgccaccatg tcgaataagc gctcgcgaaa aaaatcggtc tcgaaccggc
     8581 caggcccgcg atacgtgccg accggcgtct tgttggtcag ctgcagcgca acgtcgatgt
     8641 cgatattggg gatgcgatag ggtcccgaca tgaattgcgc gacattgcgg gcgccgaccg
     8701 cgccgttggt tcgcatgtag gcgccgacgt cgacataggc atgcccgcgc agcccgagga
     8761 tcgtgccctc gcgcgtgcag gcgatctcca cctcgcattc cgcctcgcgc gcgtgattga
     8821 tgcacatgag gttctcgcgc cggtcctccg tccatttcac cggccggccg gtgaggcggg
     8881 ccgcgaacgg a
//
LOCUS       DATCWM010000401         2601 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_478007, whole genome shotgun sequence.
ACCESSION   DATCWM010000401 DATCWM010000000
VERSION     DATCWM010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2601
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_478007"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(337..1590)
                     /gene="ispG"
                     /locus_tag="VIQ50_07800"
                     /gene_synonym="gcpE"
     CDS             complement(337..1590)
                     /gene="ispG"
                     /locus_tag="VIQ50_07800"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011582649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HEY9360319.1"
                     /translation="MTEIGPQQRRRSVAVDVGGVIVGGDAPIVVQSMTNTDTADVEQT
                     ARQVAALARAGSEIVRITVDRDEAAAAVPRIKERLDKMGVGVPIVGDFHYIGHKLLAD
                     HPACAEALDKYRINPGNVGFKDKKDRQFGAIVETAIRYGKPVRIGANWGSLDQELLTR
                     LMDENARSPTPRDARDVTREAMVQSALLSAARAEEIGLSRDRIILSAKVSAVQDLIAV
                     YADLARRSDYALHLGLTEAGMGSKGIVASAAALSILLQQGVGDTIRISLTPEPGGDRT
                     LEVKVAQELLQTMGFRVFVPLVAACPGCGRTTSTTFQELARDIQGFIHTSMPEWKRRY
                     PGVESLNVAVMGCIVNGPGESKHADIGISLPGTGEQPAAPVFVDGKKVATLRGATVAA
                     DFKQMVIDYIERRFGEHGAGRTAAE"
     gene            complement(1664..2182)
                     /locus_tag="VIQ50_07805"
     CDS             complement(1664..2182)
                     /locus_tag="VIQ50_07805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HEY9360320.1"
                     /translation="MPKAKPSREQVTRRRAVFPRPGHDHDRCSTDAMAVAEALCAQRG
                     QRLTPIRRKVLAALLGTHKPLGAYEIIERLALTGPRLAPITTYRALEFLRENGLVHRI
                     ESRNAFVACVHNHAASALVVFLICERCGAVGEASSEQVSATLMSAARAAGFTPKSPLI
                     ELTGVCTHCRGA"
     gene            2311..>2601
                     /locus_tag="VIQ50_07810"
     CDS             2311..>2601
                     /locus_tag="VIQ50_07810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019965365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEY9360321.1"
                     /translation="MLPILLANVVANALKPRTPRRRPLAPGQGRRGSGKPINLALQGG
                     GADGAFTWGVLDQLLEDGRIDIEGMSGASAGAVNAVMLADGLTRGGPEEARQR"
BASE COUNT          414 a          861 c          882 g          444 t
ORIGIN      
        1 gagcgcttcg cgcgccgcta gcatgccggc tgccgcgacg cagcccagcg caccggccgg
       61 tcgtaaatcg gctcggagcc ttaatgccga agtaagcttt ctgccatgac tttgccacgc
      121 ggcggaactc gtgccgccgc gatcgagttc taacgtcgag gctcccaggg gtgggatcgt
      181 ggagggcgtg cgtggaaaag gttgtgctcc tttgcctttt gatcgcggtc attgggctgc
      241 tcgccgagct gtcgcgcgcg ccgcgagcgc cgcagtagcg cgcggcgcgt catccattca
      301 aagctgtcgt tgaggcgcgg cgcgccgtgc gcgcgcctat tccgccgcgg tgcgtccggc
      361 gccgtgctcg ccgaagcggc gctcgatata gtcgatcacc atttgcttga agtcggcggc
      421 aaccgttgcg ccgcgcagcg tcgccacctt cttgccgtcg acgaagacag gcgcggccgg
      481 ttgctcgccg gtaccgggaa gcgaaatgcc gatgtcggcg tgcttgcttt cccccggtcc
      541 gttgacgatg cagcccatga cggccacgtt gagcgactcc acgccgggat agcgtcgctt
      601 ccactcgggc atcgaggtgt gaatgaaccc ttggatgtcg cgggcgagct cctggaaggt
      661 cgtcgaggtc gtgcgcccgc agcccgggca ggcggccacg agcggcacga aaacgcgaaa
      721 gcccatggtt tgcagcagct cctgcgctac cttgacctcg agcgtgcggt cgccgccggg
      781 ctcgggcgtg agtgaaatgc ggatggtatc gccgacgccc tgctgcaaga gaatgctcag
      841 cgccgcggcc gaggccacga ttcccttgga gcccatgccg gcctcggtca acccgagatg
      901 cagggcgtaa tccgagcgcc gtgcgaggtc ggcatagacc gcgatcagat cctgcacggc
      961 ggacaccttc gccgacaata tgatgcggtc gcgggaaagc ccgatctcct cggcgcgcgc
     1021 ggccgaaagc agcgccgatt gcaccatcgc ctcgcgcgtc acgtcgcgcg cgtcgcgcgg
     1081 agtgggcgag cgcgcgttct cgtccatcaa tcgggtcaga agctcctgat cgagcgagcc
     1141 ccaattggcg ccgatgcgca ccggcttgcc atacctgatt gcggtctcga cgatggcgcc
     1201 gaactggcgg tccttcttgt ccttgaagcc gacattgccg ggattgatgc gatacttgtc
     1261 gagcgcctcc gcgcaggcgg gatggtcggc cagcagcttg tggccgatat aatggaagtc
     1321 gccgacgatc ggcacgccga cgcccatctt gtcgaggcgc tccttgatgc ggggaaccgc
     1381 ggctgccgcc tcgtcgcggt cgaccgtgat gcgcacgatc tcggaacccg cgcgcgccag
     1441 cgccgcgacc tgccgcgcag tctgctcgac gtcggcggta tcggtgttgg tcatggactg
     1501 cacgacgata ggcgcgtcgc cgccgacgat gacgccgccg acatcgacgg ccaccgaccg
     1561 gcgtcgttgc tggggtccga tttcggtcat gtggcctcct ttgccccagg caactgccag
     1621 acggcgccgg ccgcgtcaac gcgcgcgggt ttcgtcctgc gcatcacgcc ccgcggcagt
     1681 gggtgcagac gccggtgagc tcgatcagcg gcgatttcgg cgtaaagcca gcggcgcggg
     1741 ccgccgacat cagcgtcgcg ctgacctgct ccgaggaggc ctcgccgacg gcgccgcagc
     1801 gctcgcaaat caggaacacc acgagcgcgc tggcggcgtg gttatgcacg caagcgacga
     1861 aagcattgcg gctctcgatg cggtgcacga ggccgttctc gcgcaggaac tcgagcgcgc
     1921 ggtaggtggt aatcggcgcc agccgcggcc ccgtgagcgc gagtcgctcg ataatctcgt
     1981 aggcgccgag cggcttgtgc gtgcccaaga gcgccgccag caccttgcgg cggatcggcg
     2041 tcaggcgttg gccgcgctga gcgcatagcg cctcggcgac ggccatagca tcggtcgagc
     2101 aacggtcgtg gtcatgaccg ggtcggggaa agacggcccg ccgccgcgta acttgctcgc
     2161 gcgagggttt ggctttcggc atgcacgtat cttaatcgct ttgacggtat ttcgctcttg
     2221 ctgcaatgcc ataatatata ttgcaatgca gcaatcccgc caccatatca cacgttcctc
     2281 cgaattcatt cccacaacgc cgcgccgaga atgcttccta ttctgctcgc aaatgtcgtt
     2341 gccaatgcgc tcaagccgcg aactccgcgg cggcggccgc tcgcacccgg gcaaggcaga
     2401 cgcggctcgg gcaagccgat caatctcgcc ctacaaggag gcggcgccga tggcgctttc
     2461 acctgggggg tgctcgacca gctgctcgag gacggccgca tcgatatcga aggcatgtcc
     2521 ggcgcgtcgg cgggagcggt gaatgcggtc atgctcgccg atgggctcac ccgcggcggg
     2581 ccggaagagg cgcgccagcg g
//
LOCUS       DATCWM010000402         2589 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_229875, whole genome shotgun sequence.
ACCESSION   DATCWM010000402 DATCWM010000000
VERSION     DATCWM010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2589
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_229875"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..914)
                     /locus_tag="VIQ50_07815"
     CDS             complement(<1..914)
                     /locus_tag="VIQ50_07815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360322.1"
                     /translation="MLLHRRLTCASALRKASLGLLLGLASIWLAGLAVAGSASAANRE
                     HAGKAGEVDTEHMFGFTEGSDIGEAGEKELETDSTGRFGKFDGSYNKVATALEAKYSF
                     SDRFRVSAVATVAYYDIAGVSAFDDRRQAALQSISFDARFRLFDREHAPVGLTLSVEP
                     RRGFTDDMSGEGADQYGAEIRLLADRELIPGHLFAALNVSYEPEQARLRTSGEILRES
                     LLGIGGALAMQVMPNVFIGAEARSLRQYDGLGLNSFAGQALYIGPTLYATFGQGYFLS
                     AAWNVQVWGAVAGTSGALDLVNFERHQA"
     gene            917..1111
                     /locus_tag="VIQ50_07820"
     CDS             917..1111
                     /locus_tag="VIQ50_07820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360323.1"
                     /translation="MRNPIAIQRMPTAVAMGVTVSDQISDEDFGGRSSRMGSALASVR
                     NGGASNGMATRENAAVGIET"
     gene            1108..1305
                     /locus_tag="VIQ50_07825"
     CDS             1108..1305
                     /locus_tag="VIQ50_07825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360324.1"
                     /translation="MSDPYEMVMQRAAFVLHVACAVAMIAMAAGRAMIVGVGKGGLTF
                     KHVDGVVKHHGHDAGKLGDQK"
     gene            1548..2516
                     /locus_tag="VIQ50_07830"
     CDS             1548..2516
                     /locus_tag="VIQ50_07830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015930180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HEY9360325.1"
                     /translation="MFPMRPHQSVDRDHVHDHPDHDHLGRAHVHAPASFGMAFAVGIG
                     LNLTFVVVEFTYGVLANSVALIADAGHNLSDVLGLVIAWIASVLTRRAPSSRYTYGLG
                     GSSILAALFNAVLLLVAVGAIAWEAVLRLFHPEPVASGIVMIVAAVGIIVNGVTAALF
                     ASGRKGDLNIRGAFLHMVADAAVSAGVVVAGLVILYTGWLWLDPLTSLVIVGVIVWGT
                     WSLLRDSLAMSVDAVPASIDPQAVRSYLASCAGVAAVHDLHIWPLSTAENALTAHLVF
                     PTGHPGDEFLLTAATELRQRFGIGHTTLQIEISEQTTCHLAPDHVV"
BASE COUNT          452 a          852 c          809 g          476 t
ORIGIN      
        1 ttcgcttgat gccgctcgaa attgacaagg tcgagcgcgc ccgaggttcc cgccaccgcg
       61 ccccagacct gcacgttcca tgccgccgag aggaaatatc cttggccgaa ggtcgcgtac
      121 aaggtcgggc cgatgtaaag cgcctgcccg gcgaaactgt tgaggccgag cccatcgtac
      181 tgccgcaggc tgcgagcttc cgcgccgatg aacacgttcg gcatcacctg cattgcgagc
      241 gcccccccaa tcccgagcag cgattcgcgc aagatctctc cggacgttcg cagccgcgcc
      301 tgttccggct cgtagctcac atttagcgcc gcgaatagat ggccgggtat caattcacga
      361 tccgcaagca ggcgaatttc ggcgccgtac tggtcggcac cctccccgct catgtcatcc
      421 gtgaaacccc gacggggctc gacgctgagc gtcagcccga ccggcgcgtg ctcgcgatcg
      481 aacagacgga atctcgcgtc gaacgaaatc gactgcagcg ccgcttggcg gcgatcatca
      541 aacgcgctca cgcccgcgat atcgtaatag gcgaccgtcg ccacggcgga gacacggaac
      601 ctgtccgaaa aactgtattt ggcctcgagc gccgtcgcga ccttattgta ggagccgtcg
      661 aacttgccga aacggccggt cgaatcggtc tcgagttcct tttctcccgc ttccccgata
      721 tcgctgcctt cggtgaaacc gaacatgtgt tcggtgtcga cttcgcccgc cttgcccgcg
      781 tgctcacggt tcgcggccga agccgagccg gccaccgcga ggcccgccaa ccatatggat
      841 gccagcccta gaaggagccc gagcgacgcc ttgcgaagcg ccgaggcgca ggtcagccgc
      901 cggtgtagca acattgttgc gcaatcccat cgcgatccag cgcatgccca cggccgtggc
      961 catgggcgtg acggtctcag atcagatcag cgatgaggat ttcggcggcc gctcaagcag
     1021 gatgggatcg gcgcttgcga gcgtgcgcaa cggcggcgcg agcaacggca tggctacaag
     1081 agagaacgcg gctgtcggga tcgagacatg agcgatccct acgagatggt gatgcagcga
     1141 gcagcattcg tccttcacgt cgcctgcgcc gtggcgatga tcgccatggc ggccgggcgc
     1201 gctatgatcg tgggcgtcgg caaaggcggg ctgactttca aacacgtgga cggcgtggtc
     1261 aaacatcacg ggcatgacgc cggcaagctg ggcgatcaaa aatagcccaa gcagccacgg
     1321 gccgaagcgc cgcatcctta aggaagccaa gccgtgcccc ttgacctgga gtaccgtcca
     1381 actttgccag cttatccccc gcggagaaac cgggtcggcg cgttctcttc gaacatgttg
     1441 ccgccaagcc acagacgcgt gcggcggggc ggaactgctg tgtgaccgcg aggcggatgc
     1501 atatatgcgg cggatgcata tatcatgacg cgtcgcatcg acgtttcatg ttccccatgc
     1561 gcccacatca gtctgttgat cgcgatcacg tgcatgacca ccctgatcat gaccatctcg
     1621 ggcgcgccca tgtccacgct cccgcaagct tcggtatggc gttcgccgtc ggtatcggcc
     1681 tcaatctgac gttcgtcgtg gtggagttca cctacggcgt gctcgccaat tccgtggcgc
     1741 tgatcgccga cgccgggcac aacctctccg acgttctcgg gctggtcatt gcctggattg
     1801 caagcgtcct gaccaggcgt gctccttcgt cgcgctacac ttatggcctc ggcggctctt
     1861 cgattctcgc ggcgctgttc aacgccgtgc tgctgctcgt cgcggtcggc gccatcgcct
     1921 gggaggcggt gctgcgactg tttcaccccg aaccggtggc gagcggcatc gtcatgatcg
     1981 tggccgctgt cggcatcatc gtgaacggcg tgaccgccgc cctgttcgcg tccggccgca
     2041 aaggcgacct caacatccgc ggggcgttcc tgcacatggt cgcggacgcc gcggtctcgg
     2101 cgggtgtcgt cgtggcaggc ctggtcatac tctacaccgg ctggctctgg ctcgatccgc
     2161 tgaccagcct ggtgatcgtc ggtgtgatcg tatggggcac ctggagcttg ttgcgtgact
     2221 cgcttgccat gtcggtcgac gcggtgccgg catcgatcga tccgcaagca gtgcggagct
     2281 accttgcatc ctgcgccggc gttgccgccg tgcacgatct gcatatctgg ccgttgagca
     2341 cggcggaaaa cgccctgacc gcgcacctcg tcttccccac tggccatccc ggagacgaat
     2401 tcctgctgac cgcggcgacc gagctgaggc agcgcttcgg catcgggcat acgacgttgc
     2461 agatcgaaat cagcgagcaa accacctgcc acctcgcgcc cgatcacgtc gtgtgaggcg
     2521 cgatggatcg attggggtgc ggcggctagg cggcggagcc ctcggcaagg aacggctcga
     2581 tggcgctga
//
LOCUS       DATCWM010000403         6799 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_467310, whole genome shotgun sequence.
ACCESSION   DATCWM010000403 DATCWM010000000
VERSION     DATCWM010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6799)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6799)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6799
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_467310"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..221
                     /locus_tag="VIQ50_07835"
     CDS             <1..221
                     /locus_tag="VIQ50_07835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008130071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1849 family protein"
                     /protein_id="HEY9360326.1"
                     /translation="AAGKEALASLKRWPVTVSYFDKTARDDQAPVYSIRFEVYENGVS
                     RALMLDYNDFAISGELTSLELRNSAPCR"
     gene            complement(282..1007)
                     /locus_tag="VIQ50_07840"
     CDS             complement(282..1007)
                     /locus_tag="VIQ50_07840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360327.1"
                     /translation="MAMVELAKADVAIVTGGDNGFNHIFVQPEINAYADLRGKTVVVD
                     APNTAYALLLYKALKDAGLNKGDYAIKPVGGTTARLEAMTKDKGNAAAAVLNPPFSFR
                     AGEAGLKDMGTATKAVGAYQSDGAFVMRDWAKANSDALVRYISAYVEGRRWALDPANK
                     AEAIALLSERLKLTPQGAALSYAAATDPAEGMAKDAKFDMAGFANVLKLRAEIEGQWG
                     GKPPAPEKYVDLSYYDRALSGLR"
     gene            complement(965..1270)
                     /locus_tag="VIQ50_07845"
     CDS             complement(965..1270)
                     /locus_tag="VIQ50_07845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360328.1"
                     /translation="MQTRRNLMLGALACAAMFGTTSSAPAQTHLKIMVFPGLSNFSIF
                     AAQHKNLFAKHGLAVEVLNTPNSDVLRNGPKATIRSRTRQSTTPWRWSNSPRPTSPS"
     gene            complement(1446..1760)
                     /locus_tag="VIQ50_07850"
     CDS             complement(1446..1760)
                     /locus_tag="VIQ50_07850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3572 domain-containing protein"
                     /protein_id="HEY9360329.1"
                     /translation="MTKRGGRANRPEERVAAEALAVAALAFIAAEPERLGRFLAMSGI
                     GPDSIRAAAREPQFLLGVLDHLAADEPLLIAFAAENAIPPSAVMEARDTIAERRWERE
                     TP"
     gene            1918..2355
                     /locus_tag="VIQ50_07855"
     CDS             1918..2355
                     /locus_tag="VIQ50_07855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360330.1"
                     /translation="MRQGRFSIAGVSVLFAVGLALWEVYFFWFAGLFPWLEAGLTPER
                     LGFNMAWLAAIYLTFQLISIPFALPSPSGRFIGVVDGMASLLPLAVVLVAVFGKPYLI
                     GSGARWEAAFLLIFITLVDLFGGYTFNIALSRRTMDVAPAAPT"
     gene            2570..2941
                     /locus_tag="VIQ50_07860"
     CDS             2570..2941
                     /locus_tag="VIQ50_07860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY9360331.1"
                     /translation="MSKTVMIVEDNELNMKLFHDLLEAHGYDTVATRNGIEALDLARK
                     HRPDLILMDIQLPEVSGLEVTKWLKEDPELKAIPVVAVTAFAMKGDEERIREGGCEAY
                     LSKPISVAKFIETIRRFLGSA"
     gene            complement(3379..3546)
                     /gene="rpmG"
                     /locus_tag="VIQ50_07865"
     CDS             complement(3379..3546)
                     /gene="rpmG"
                     /locus_tag="VIQ50_07865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEY9360332.1"
                     /translation="MAKATTIKVKLVSSADTGFYYVTRKNSRTMTEKLVKKKYDPVAK
                     KHVEFRESKIK"
     gene            3773..4468
                     /locus_tag="VIQ50_07870"
     CDS             3773..4468
                     /locus_tag="VIQ50_07870"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004061 - arylformamidase activity
                     [Evidence IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEY9360333.1"
                     /translation="MSIAFRKIVDISLELDPKNFAMRTPAGFKKDMQFEMEVIKEHDA
                     PGGAGQIVRGVHMRLHAGSHVDAPEHNVRGGTQIHQLPLDLFIGDAVLADLRDKLPGR
                     AITAKDLEQRLDNRIRKGDRLLLRTDHNNAYDGGSEKWMKESPYLTIGATMWCIEKGV
                     VIVGYDFYHGNDEPGAPRVFHNSRTLSERGVITMPYLKNLDQIDKDRFTLVAFPLKLI
                     GAEASPIRAVALL"
     gene            4501..5445
                     /locus_tag="VIQ50_07875"
     CDS             4501..5445
                     /locus_tag="VIQ50_07875"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9360334.1"
                     /translation="MTVAIVGICLAAPARGEEPYPSRLITIVAPITGGTAIDILARLY
                     ADKLAKRFGQQVVVANRAGAGGLIGAQAVASSAPDGYTLLFANSGHAILGTLNKNLPF
                     DPVADFAGVSLVGEAPAVVVVPPSLGVSSLREFVALATSKPGEINYGSAGIGTSTHLA
                     GAYFALKAGIDLVHVPYTVSATIIADLLGGRIQAAFVPMAFVLPLLQDGRLTAVAMGA
                     KDPINGPIAIATALSQGIDYEYATWYGVLAPGKMAKEVLKTLSQAIAEASKDPELQAK
                     LRVQGIEPRDIRVEAFDAHIRNDMARIAPLLKSIAENR"
     gene            5613..6239
                     /locus_tag="VIQ50_07880"
     CDS             5613..6239
                     /locus_tag="VIQ50_07880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007614757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360335.1"
                     /translation="MDQMTWRAFAGAGFALLLAASASFAQQQASTVRVRGTIEAVDGP
                     MLTVKSRDGQTTYHVKLADNVSIRGIVKASLADIKQNSFIGVTGMPQADGSQKAVEIH
                     IFPEALRGTGEGHRPWDLTPNSTMTNATVAQMVKGVEADEITLKYKEGEKKIVVVPST
                     AIVTYLPGDKSELKPGAKVFISAANKKEDGTLETAAISVGRDGITPPM"
     gene            complement(6280..>6799)
                     /locus_tag="VIQ50_07885"
     CDS             complement(6280..>6799)
                     /locus_tag="VIQ50_07885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEY9360336.1"
                     /translation="PAARELDPHVEAHLMKRVKRPSAAKARAFALAAIRETFEETGLL
                     LGVCGEATKAPRGPWTEFAAANILPDLGALHFIGRAITPPGRPRRFDARFFTMDAGAI
                     AHRIEGVTGPDAELVELVWMPLGEAKELDMPAVTGVMLEELDARIADGFAPELPVPFY
                     SMPRGSFRRDML"
BASE COUNT         1171 a         2159 c         2219 g         1250 t
ORIGIN      
        1 ccgcggccgg caaggaggcg ctcgcctcgc tcaagcgctg gccggtgacc gtgagctatt
       61 tcgacaagac ggcgagggac gaccaggcgc cggtctattc gatcaggttc gaggtctacg
      121 agaacggcgt ctcgcgggcg ctgatgctcg attacaacga cttcgccatc agcggcgaac
      181 tcacctcgct cgaactgcgc aacagcgccc cgtgccggtg attgccgcac gcgagtgacg
      241 gcgcatgcgg catgcccgcc ctcgaatgta aacgcccttg cttaccgcag gcccgaaagc
      301 gcccggtcgt aataggagag gtcgacgtat ttctccggcg cgggcggctt gccgccccac
      361 tgtccttcga tctcggcgcg cagcttgagc acgttcgcaa agcccgccat gtcgaacttc
      421 gcatccttcg ccataccttc ggcggggtcg gtcgccgccg cgtaggagag cgccgcgccc
      481 tgtggcgtga gcttgagacg ctccgagagc agcgcaatcg cctccgcctt gttggcggga
      541 tcgagcgccc atcggcggcc ttccacatag gcgctgatat agcgcacgag cgcgtcgcta
      601 ttggctttgg cccagtcgcg catgacgaag gcgccgtccg attgataggc gccgaccgct
      661 tttgtcgccg tgcccatgtc cttcaatcca gcctcgccgg cgcggaagct aaagggcgga
      721 ttgagcacgg ctgctgctgc gttgcccttg tccttggtca tggcctcgag gcgcgcggtg
      781 gtgcccccga ccggcttgat cgcgtagtcg cccttgttga ggccggcgtc cttgagcgcc
      841 ttgtagagga gcagcgcata cgccgtgttc ggagcatcca ccacgactgt tttgccgcgc
      901 agatcggcgt aggcattgat ctccggctgg acgaagatgt ggttgaagcc gttgtcgccg
      961 ccggtcacga tggcgacgtc ggccttggcg agttcgacca tcgccacggc gttgtcgact
     1021 gccgcgtgcg cgatctgatg gtcgcctttg gaccgttgcg cagcacgtcg gagttcggcg
     1081 tgttcaggac ctcgaccgcc agaccatgct tggcgaacag gttcttgtgc tgggcggcga
     1141 agatcgagaa gttggacagg ccggggaaga ccatgatctt caaatgggtc tgggccggcg
     1201 ccgaactcgt cgtgccaaac atcgcggcac aggccagcgc gccgagcatg aggttgcgcc
     1261 ttgtttgcat ggtcgatcct tctaggattg tcgttggttg ccgcgaagtc taacaccggc
     1321 cgcgccgagt tcgtccagcc gccacctcat tcgtcctcgt cgctctcgag cgcaaggcct
     1381 ttgaccacgg gaagccgggc atggtcctcc cgcctgttgc gtcctcgctc ggcgccatcg
     1441 tcgagtcacg gcgtctcgcg ctcccaacgg cgctcggcga tcgtatcacg cgcctccatc
     1501 accgcgctgg ggggaatcgc gttttccgcc gcaaacgcaa tcagtagcgg ctcgtcggcg
     1561 gcaagatgat cgagcacgcc gagaagaaat tgcggctcgc gggcggcggc gcggatggaa
     1621 tcggggccta ttccgctcat cgcgaggaag cgccccagcc gctcgggctc ggccgcgatg
     1681 aaggcgagcg cggcgacggc gagcgcttcg gccgcaacgc gttcctccgg acgattcgcc
     1741 cgtccgcctc gcttcgtcat agcaatctcc gcagatggac gcgggtgtcg aggaaagctc
     1801 gcccgcaggc cgcgaatcaa gccggctggg ccgctggccg aggcgaaatc aagtccctcg
     1861 acgcatgggc ggcatctcgg ctaggggagg ggcgtctttt tgtgcaagga ggcgactatg
     1921 cgccagggcc gtttctccat tgccggggtg agcgttctct tcgccgtggg cctggcgctg
     1981 tgggaggtgt atttcttttg gtttgcagga ttgttcccgt ggctggaggc cggcctcacg
     2041 ccggaacggc tcggcttcaa catggcgtgg ctcgccgcga tctatctgac gtttcagctc
     2101 atctccattc ccttcgcctt gccctcgccg agcgggcgct ttatcggcgt cgtcgacggc
     2161 atggcctcgc tgttgccgct cgccgtcgtg ttggttgccg ttttcggcaa gccgtacttg
     2221 atcggcagcg gggcccgctg ggaggcggcc ttcctgctga tcttcattac cttggtggac
     2281 ctgttcggcg gatacacatt caatatcgcg ctcagccgtc gcaccatgga cgtcgcgccg
     2341 gctgcgccca cgtaaaatgc gcttggcggc aacgtttgcg tttccgtaac gtctcggcac
     2401 tagtaggcac tattgctgag gtgagtcgct gttctcggac gcaaatgtgg tagcgcactc
     2461 cgataccctc tcgcgcaaag gggggagggt gaggaagcgt gtcgccgagg tttaagtccg
     2521 gcggtggcgg cgcagctgcc ggcaaacgtt ccatctcgga agctcggcaa tgtcgaagac
     2581 cgtgatgatc gtggaggaca acgagctcaa catgaagctc ttccacgatc tgttggaagc
     2641 gcacggctac gacacggtgg cgacgcgcaa cggcatcgag gcgctcgatc ttgcccgcaa
     2701 gcaccgtccc gatttgattc tgatggacat tcagctgccg gaggtctcgg ggctggaagt
     2761 gaccaaatgg cttaaggagg atcccgagct caaagccatt ccggtggtcg cagtgacggc
     2821 gttcgcgatg aagggggacg aagagcgcat ccgcgagggc ggttgcgagg cctatctgtc
     2881 gaagccgatc tcggtcgcca agttcatcga aaccatacgc cgcttcctcg gctcggcgtg
     2941 aagctcgtca tgggggcccc ggcctcgggt cactcgagat ggctgggcga ggggatgact
     3001 ggcctagcgg cctaccccgg tcgtccgttt agcttgacca aattctctgc cttatccaca
     3061 acctaatttg ttgatttccg aggtggttgc gttaccgtgc accatacgat gagaggatgc
     3121 tcctggctcg gcgagaaccc gggctgcggg gctatccggc atcgcctatc gcattgataa
     3181 ccctgcggaa tgctcaggtc cgccgcatct cctgggtccg tggggttcgg ccggttcggg
     3241 ggcggtaaga gtggcctcct catgacgccg ctcccgaccg gccacctttg ttttcgggtg
     3301 ggcgcttaaa tcacagccga agttgagcaa aatacgcgcg ggcggtcgct gcgcgcccct
     3361 gcgaacgccc gcgaccggtc acttgatctt ggattcgcgg aactcgacgt gcttcttcgc
     3421 gacggggtcg tatttcttct tcaccagctt ctcggtcatg gtgcgcgaat tctttcgcgt
     3481 gacgtaatag aagccggtgt cggcgctgga gaccaacttg actttgatgg tggtggcttt
     3541 cgccatggca agcctcgatc acgttgcgtt acgcgcacgt atatagggat tcccacgcaa
     3601 gcgaaagcct tctcggcgcg ccgcccgcgg gcgcacgaca gcaatttcgc ttggaatgag
     3661 gtggtcagcg tcgctgtagc ctatgccgag gaggcggtca tgcggacgat cactgcggtc
     3721 gtgctggcga atgtgacaag atcaaatcac gtgcgattgg aggagccgcg acatgtccat
     3781 tgcgtttcgc aagatcgtcg atatcagcct cgagctcgat ccgaagaact tcgccatgcg
     3841 cacccccgcg ggattcaaaa aggacatgca gttcgagatg gaggtgatca aggagcacga
     3901 cgcgccgggc ggcgccggcc agatcgtgcg cggcgtgcac atgcgcctgc atgccggcag
     3961 ccacgtggac gcgcccgagc acaacgtgcg cggcggcacg cagatccatc agctgccgct
     4021 cgacctcttc atcggcgatg ccgtcctcgc cgacctgcgc gacaagctgc cgggcagggc
     4081 gatcaccgcg aaggacttgg agcaacgcct cgacaaccgc atcaggaaag gcgaccgcct
     4141 gctgctgcgt accgaccaca acaacgccta cgacggcggc tccgaaaaat ggatgaagga
     4201 gtcaccctat ctcaccatcg gcgccaccat gtggtgcatc gaaaagggcg tggtgatcgt
     4261 cggctatgat ttctatcacg gcaacgacga gcccggcgcg cctcgcgttt tccacaattc
     4321 gcgcacgctg agcgagcgcg gtgtgatcac catgccgtat ctgaagaacc tcgatcagat
     4381 cgacaaggac cgcttcacgc tggttgcctt tccgctcaag ctgatcggcg ccgaggcctc
     4441 gccgatccgt gcggtggcgc tgctgtgagc gcgcgttgcg ctaggggctt cgcgcgggtt
     4501 gtgaccgtcg cgatcgttgg gatctgtctc gccgcgccgg cgcgcggcga ggagccatat
     4561 ccctcgcggc tgatcaccat cgtggcgccg atcaccgggg gcacggcgat cgacattctg
     4621 gcgcggctct acgccgacaa gctcgccaag cgttttggcc agcaagtggt ggtcgccaac
     4681 cgggccggcg ccggcggact gatcggcgcc caggcggtcg cgagttccgc ccccgacggc
     4741 tacacgctac tgttcgccaa ttccggccac gccattctcg gcacgctgaa caagaacttg
     4801 ccgttcgatc cggtggccga tttcgccggc gtgtcgctcg tcggcgaagc gccggccgtc
     4861 gtggtcgtgc cgccgtcgct cggagtgtcg agcctgcggg aattcgtggc gctggcgaca
     4921 tcaaagccgg gcgagatcaa ctacggctcg gccggcatcg gtacctcgac ccatctcgcc
     4981 ggcgcctatt tcgcgctgaa ggcgggcatc gacctcgtgc acgtgccgta tacggtgagc
     5041 gcgaccatca tcgccgacct cttgggcggc cgcattcagg ccgcgttcgt gcccatggcg
     5101 ttcgtgctgc cgctcctgca ggacggccgg ctgacggcgg tggcgatggg ggcgaaggac
     5161 ccgatcaacg ggccgatcgc aatcgccact gcgctgtcgc aaggcatcga ttacgaatac
     5221 gccacctggt acggcgtgct ggcgccgggc aagatggcga aggaggtgct caaaacgctc
     5281 agccaagcca tcgcggaggc cagcaaagat ccggaactgc aagcgaaact ccgcgtccaa
     5341 gggatcgaac cgcgcgacat ccgcgtcgag gcgttcgacg cccatatccg caacgacatg
     5401 gcgcgcatcg cgcccctgct aaaatccatc gcggagaacc gctgacggcg caagccggcc
     5461 tacggtttgc ggcactagat attcgccgca cagtgccaca gcgattatgt cattgctgct
     5521 atgtcattag ctgccgctgg aacaaacatg acatgcgcta aggttttatt tggcgggcgg
     5581 cgttcatcaa tcggccactc gggaggatcg caatggacca gatgacgtgg cgcgctttcg
     5641 ccggagcggg attcgcgctg ctgcttgccg catccgcaag ctttgcccag caacaggcct
     5701 ccactgtgcg ggtgcgcggc accatcgaag cggtggatgg cccgatgctg acggtcaagt
     5761 cgcgggacgg ccaaacgacc taccacgtga agctcgcgga caacgtctcg atccgcggca
     5821 tcgtcaaagc ctcgctcgcg gatatcaagc agaactcgtt catcggagtc accggcatgc
     5881 cacaggccga cggcagccag aaggcggtgg aaatccacat tttccccgaa gcgttgcgag
     5941 gcaccggcga ggggcatcgt ccgtgggacc tgacgccgaa cagcactatg accaatgcca
     6001 cggtcgcgca gatggtcaaa ggcgtggagg ccgacgagat cacgctgaaa tacaaggagg
     6061 gagagaagaa gatcgtggtc gtgccgagca cggcgatcgt gacctatctc cccggcgata
     6121 agagcgagct caagcccggc gccaaagtct tcatctccgc cgccaacaag aaggaagatg
     6181 gcacgctcga aacggccgcc atctcggtcg gccgcgacgg gatcacgccc ccgatgtgag
     6241 ccgcgtgtga aggcgcgcgt tgcgagcgag gggttcgcat cacagcatgt cgcgccggaa
     6301 gctgccgcgc ggcatgctgt agaaggggac cggcagttcg ggtgcaaacc cgtcggcgat
     6361 gcgcgcgtcg agctcctcca gcatcacgcc ggtcaccgcc ggcatgtcga gctccttggc
     6421 ctcgccgagc ggcatccaca cgagctccac cagctcggca tcggggccgg tgacgccctc
     6481 gatgcgatgc gcgatcgcgc ccgcatccat agtgaagaag cgcgcgtcga accggcgcgg
     6541 acgtcccggc ggggtgatgg cgcggccgat gaagtgcaac gcgccgagat cgggcaggat
     6601 gtttgcggca gcaaactccg tccacggccc gcgcggtgcc ttcgtcgctt ccccgcacac
     6661 gccgagcagg aggccggttt cctcgaacgt ctcgcggatg gcggcgagcg cgaacgcgcg
     6721 cgccttggcc gcgctcggcc gcttgacccg cttcatcagg tgcgcttcga cgtggggatc
     6781 gagctcgcgc gccgccggc
//
LOCUS       DATCWM010000404         2203 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_451227, whole genome shotgun sequence.
ACCESSION   DATCWM010000404 DATCWM010000000
VERSION     DATCWM010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2203
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_451227"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            547..1683
                     /locus_tag="VIQ50_07890"
     CDS             547..1683
                     /locus_tag="VIQ50_07890"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HEY9360337.1"
                     /translation="MRPLEGVFVLDFSTLLPGPLATLLLAEAGAEVVKVEPPGRGEEM
                     RGHAPRWGRDSASFALLNRGKRSIALDLKDAAERGRLAPLLQRADVIVEQFRPGVMER
                     LGLDYASVAKLNPMVVYCSISGYGQTSGKRNVAAHDLNYIGDAGLLALSMGDLSQPVL
                     PPALMADIAGGAYPAALNILLALEERRRTGRGRHLDVAMADNLFPLMFWAIGCGLVAG
                     AWPESGKGYLTGGSPRYALYPTKDGRMLAAAPLEQKFWETFCELIGLESELRDDGKDS
                     AATKARVAAIIANETAETWRSRFAGKDCCCSIVASLGDAFSDPHYAARGVFDYALANS
                     EGAIMPALPLPLDGAFRASPATAIASPSLGADNEGYLRAAHNPT"
     gene            1826..>2203
                     /locus_tag="VIQ50_07895"
     CDS             1826..>2203
                     /locus_tag="VIQ50_07895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360338.1"
                     /translation="MTTTFAPAALDATGSSGESDPISVDARAASPGASGSGATFAREF
                     SPYIDMAMPTDADLSAIAAASGIHNFTLAFVLSSGSGIGWQGVGTISDDTLANGTTIL
                     SQVQAIQAAGGHITISFGGAAGQE"
BASE COUNT          362 a          727 c          730 g          384 t
ORIGIN      
        1 gctcggatag gtgtcggcgt gggcggcaac gctgagccag atcgcgccgg cgacgaggat
       61 gttgagcaag gtcttcatcc ggcatccctc cctgtatctt ggcaccgtgc tgagcgcgcc
      121 gcggacttga tgccgcgcac ggcctttcgc ctccctcgca aggagactag cgcatttgcg
      181 ccacgccggc gcggctctcg atggtcttag gcgagtagcc cgagcgcgcg ttgaccgcca
      241 cggtcgcgcg tgtctggagc ccggagatcg cttgctccat ccgggctgcg tcgatgtcgg
      301 atcggaagga atgagtccgg cctttggcta tcccgctaag gaccacgcgt gggcgtggcg
      361 gccggaaatg cgcatctgga cggcatggta attcgcgctg gcttaatcgg gaatgaacgc
      421 ctcgcgctgc gccgcacaaa gcgcacccaa ctccgtcctc gaaccggatg tcgcttcgct
      481 ccatccgggc gacaggctat tgaggacggt agagatctgc cgactcctcc aaacgggaaa
      541 agcgcaatgc ggccgctcga aggtgtattc gttcttgatt tctcgacctt gctccccgga
      601 ccattggcga cgctgctgct ggcggaagcg ggtgcggagg tggtgaaggt cgagccgccg
      661 ggacgcggcg aggagatgcg cggccatgcg cccagatggg ggcgcgacag cgcgagcttc
      721 gcgcttctca atcgcggcaa gcgcagcatc gctctcgacc tgaaagacgc cgccgaacgc
      781 ggccggctcg ctcctttgct gcaacgcgcc gacgtcatcg tcgagcaatt ccggccgggg
      841 gtgatggagc ggctcggcct cgactacgcc tcggtggcca aactcaatcc catggtcgtc
      901 tactgctcga tctcgggata cgggcaaaca agcggcaagc gcaacgttgc cgcgcatgac
      961 ctcaactata tcggcgatgc cggtctgctg gcgctgtcga tgggcgatct ctcgcagccg
     1021 gtgttgccgc cggcgctgat ggcggacatc gcgggcggcg catatccggc ggcgctgaac
     1081 attctcttgg cgctcgagga gcgtcggcgg acggggcgcg ggcgccacct cgacgtggcg
     1141 atggccgaca atctgttccc gctcatgttc tgggcgatcg gctgcggcct cgttgccggc
     1201 gcttggccgg aaagcggcaa gggttacctg accggcggat cgccgcgtta tgcgctctat
     1261 cctaccaagg acggcaggat gctggcggcc gcgccgctcg aacagaaatt ctgggagacg
     1321 ttctgcgagc tcatcggcct tgaaagcgag cttcgcgacg atgggaaaga ctccgccgcg
     1381 acgaaagcgc gcgtcgccgc catcattgcc aacgagacgg ccgagacttg gcgttcgcgt
     1441 ttcgccggca aggattgttg ctgctcgatc gtcgcgagcc tcggcgatgc attcagcgat
     1501 ccgcactacg ccgcgcgcgg ggtattcgac tacgcgctcg ccaattccga gggtgccatc
     1561 atgccggcgc tgccgctacc gctcgatggc gcctttcgcg caagccctgc gacagcaatc
     1621 gcttcgcctt cgctcggcgc ggataacgag gggtacttgc gggccgcaca caatccgacg
     1681 tgaccgccgc aaattgcgag gcaggttcgc atcgtcagga agccctgctc tcgccgcttt
     1741 catcgcccat tgaccgcagg ggatagatca atcaacctct ccgagacttc agcggggcgg
     1801 ctcaagtcaa gcacggaggc gtcccgtgac gacgacgttc gcgcccgcag ccctcgacgc
     1861 gacgggctct tccggcgaat ccgacccgat ctcggtagat gcgcgcgccg cctcgcccgg
     1921 cgcatccggc agcggcgcga ccttcgcgcg cgagttcagt ccctatatcg acatggcgat
     1981 gccgacggat gcggatctct ccgcgatcgc cgctgcctcc ggcatccaca atttcaccct
     2041 cgcgttcgtg ctgagctccg gcagcggcat cggctggcaa ggcgtgggca cgatcagcga
     2101 cgacacgctc gccaacggca cgacgatcct gtcgcaggtg caggcgatcc aggcggcggg
     2161 cggccacatc acgatctcgt tcggcggcgc tgccgggcag gag
//
LOCUS       DATCWM010000405         2981 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_8390, whole genome shotgun sequence.
ACCESSION   DATCWM010000405 DATCWM010000000
VERSION     DATCWM010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2981)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2981)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2981
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8390"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..188)
                     /locus_tag="VIQ50_07900"
     CDS             complement(<1..188)
                     /locus_tag="VIQ50_07900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360339.1"
                     /translation="MFSQQLRNHRGRGLVKRTASRNAQHGRISPPLRPKRLTLDDSES
                     RDSFVHGFHRGGGLGVVRG"
     gene            complement(618..1910)
                     /gene="hmgA"
                     /locus_tag="VIQ50_07905"
     CDS             complement(618..1910)
                     /gene="hmgA"
                     /locus_tag="VIQ50_07905"
                     /EC_number="1.13.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004411 - homogentisate 1,2-dioxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homogentisate 1,2-dioxygenase"
                     /protein_id="HEY9360340.1"
                     /translation="MSGFGNSFETEALPSALPVGRNSPQKVAYGLYAEQLSGSPFTAP
                     QATNQRSWLYRIRPTVRHIGRLARIDRGNIRTAPEREDGSQMLIQRRWGPVPIPSDQR
                     TFVTGLSTVTTAGDAEAMTGMAAHLLFVTQSMTREHFFDADGELLVVAQHGGLRFRTE
                     FGVIEITPGEICIIPRGIIFRVELIEGPARAYVCENYGNPFSLPYRGPIGANCLANPR
                     DFLAPVADYEDREGPHTLVVKWGGELYRAEVGHSPLDVVAWHGNYVPYKYDLRRFSPV
                     GAVLFDHPDPSIFTVLTAPSETPGTANVDFVIFPERWSVAENTFRPPWYHRNIMSEFM
                     GLIYGVYDAKPEGFVPGSMSLHNTMLPHGPDSDAFTHASEAALAPTKLTTTLAFMFET
                     RFRQRVTRYAAELPERDEDYPDCWNGLRKHFDPMTLRA"
     gene            complement(1942..2910)
                     /locus_tag="VIQ50_07910"
     CDS             complement(1942..2910)
                     /locus_tag="VIQ50_07910"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9360341.1"
                     /translation="MAASKRKSALLWISALLLLMAGAASAAADDYPSRPIKIVVPFAA
                     GGGNDLLARLIGQELSANLRQPVIIENRPGAGTQIGAEAVAHAAPDGYTLLSTSLTTY
                     ALNPNLYKKLPYDPARDFAPVALTGRFELLLVANPSFPAASLADLLALARAKPNAISF
                     ASSGPASPHQMAMELLLHRAGVEMVHIAYKGAAPAVQDVIAGHVPIMMLDVATGREPI
                     KSGLLKALASASPARFPDFPELPFPGYEASAWQGIVAPAKTPAAIIDKLNAQIGAALA
                     KPAMQQKLRTAGIEPLTSSPASFAEYMRSETAKWREVIQSAKISLD"
BASE COUNT          520 a          942 c          986 g          533 t
ORIGIN      
        1 ccacgcacga ccccgaggcc gccgccgcgg tggaagccgt ggacaaagct gtcccggctc
       61 tcgctgtcgt caagcgtgag gcgcttgggc ctgagtggcg gactgatgcg cccgtgctgt
      121 gcgttgcggg acgcagtgcg cttgaccagg ccgcggccgc gatggttgcg cagctgctgg
      181 gaaaacaagg cctaggcgcg cgggtcgagg gcgcggacgc cgtagcgacc atgaatattc
      241 tgcgtttgga gacctcgggc gtggcgttgg tctgtctgtc ttatctcgac gccagtagtc
      301 tcgcccatat gcgctacact attcgtcgcc tgcgccgaat actaccggcg gcgcaagtct
      361 tgcttgcttg ctggaaagcg gatgtggacc cagcgacatt acgggactcg acgacagcag
      421 atgcggtcgc cacgactctg cctgaggcgg cgaggttctg cctggaggcg gcacgcaatt
      481 cctcgtttcg cgcagatgcg caagaatcca gcgaggcgag cgcaactgcg gcatgagtcg
      541 gtggttatca tgacgcccgc gcaggctttt taagcgcggc gttgggaggc attttcgctc
      601 cttagcttag agcccgttca agcgcgcaat gtcatcggat cgaaatgctt gcgcaatccg
      661 ttccagcaat cggggtagtc ttcgtcgcgc tccggaagct cggcggcata gcgcgtcacc
      721 cgctggcgga agcgcgtctc gaacatgaag gcgagagtgg tagtgagctt ggtcggcgcg
      781 agcgccgcct cgctggcatg cgtaaacgcg tcggaatccg gcccatgcgg aagcatcgtg
      841 ttgtgcaggc tcatgctccc gggaacgaat ccctccggct tggcgtcgta cacgccgtag
      901 atcagaccca tgaactccga catgatgttg cggtgatacc agggcgggcg aaacgtgttc
      961 tcggcgaccg accagcgctc cggaaagatc acgaagtcga cgttcgccgt tcccggcgtc
     1021 tccgacggcg cggtcagcac cgtgaagatc gacggatccg ggtgatcgaa cagcacagcg
     1081 ccgaccggag agaaccgacg caaatcgtat ttgtaaggga cgtaattgcc gtgccaggcc
     1141 accacgtcga gcggcgaatg cccgacctcg gcccggtaga gctcaccgcc ccacttcacg
     1201 actaatgtgt gcggcccctc gcgatcctcg taatcagcga ccggcgccag gaaatcgcga
     1261 ggattggcca ggcagttggc cccgatcggc ccgcggtatg gcaacgagaa cggattgccg
     1321 taattctcgc agacgtaggc ccgcgcgggg ccctcgatca gctcgacgcg aaaaatgatg
     1381 ccgcgcggaa tgatgcagat ctcgcccggc gtgatctcaa tgacaccgaa ctcggttcgg
     1441 aaacgcaggc cgccgtgctg tgccaccacc aacagctcgc cgtcggcatc gaagaagtgt
     1501 tcgcgcgtca tcgattgggt gacgaataga agatgtgccg ccatgcccgt catcgcctcg
     1561 gcatcccccg cggtcgtcac cgtgctcaaa ccggtgacga aggtccgttg gtcactcggg
     1621 atcggcaccg gtccccagcg gcgttgaatg agcatctgcg agccgtcctc gcgctcggga
     1681 gcggtgcgaa tattcccgcg gtcgatcctc gcgagtcggc cgatgtggcg cacggtcggg
     1741 cggatgcggt agagccacga gcgctggttg gtcgcttgtg gcgcagtgaa aggcgagccg
     1801 gagagctgct cggcataaag tccgtaggcg accttctgcg gcgagttgcg gccgaccggt
     1861 aacgcactcg gcagcgcctc ggtctcgaag ctgttgccga acccggacat gatccgcggg
     1921 tcgtcactct gcggtccctc gtcaatccag cgagatcttc gcggactgga tcacttcgcg
     1981 ccattttgcc gtttcgctac gcatatattc ggcaaagctc gccggtgagc tcgtgagcgg
     2041 ctcgatgccc gccgtgcgca atttctgttg catggcgggc tttgccagcg ccgcgccgat
     2101 ctgcgcgttg agcttgtcga tgattgctgc aggtgtcttg gccggcgcga caatgccctg
     2161 ccaggcagac gcctcgtaac ctggaaacgg cagctcggga aagtcgggaa agcgggccgg
     2221 cgacgcgctc gcgagcgctt tcagcagacc ggatttgatc ggctcgcgcc cggtcgcgac
     2281 atcgagcatc atgatcggca cgtggccggc gatgacgtcc tgcaccgccg gagctgcgcc
     2341 tttataggcg atgtgcacca tctcgacgcc ggcccggtgc agcagcagct ccatcgccat
     2401 ctggtgcggg ctcgccggcc ccgaggatgc aaaggagatg gcgttcggct tcgccctggc
     2461 gagcgccagc aagtccgcga gcgaagcggc cgggaacgat ggatttgcaa ccagcagcag
     2521 ctcgaaacgc ccggtgagcg cgaccggcgc gaagtcgcgt gccgggtcat aggggagctt
     2581 cttgtagagg ttggggttga gcgcgtaggt cgtgagcgac gtcgacagca gcgtgtagcc
     2641 gtccggcgcc gcatgcgcca ctgcctcggc accgatctgc gtccccgcgc ctgggcggtt
     2701 ctcgatgatg accggctgac gcaggttcgc cgagagttcc tgcccgatca accgagccag
     2761 caggtcattg ccaccgccgg cggcgaacgg caccacgatc ttgataggcc gagagggata
     2821 gtcgtctgcg gccgcgctcg ccgcgccggc catcagcaac agcaatgcgc tgatccataa
     2881 cagcgcgctc ttgcgcttac tggcggccat cgcgccctcc cagctcaact ccgatctcgc
     2941 tccggcgggt cttgcgtgtc acttcagcgc gtccacgccc g
//
LOCUS       DATCWM010000406         3428 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_364721, whole genome shotgun sequence.
ACCESSION   DATCWM010000406 DATCWM010000000
VERSION     DATCWM010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3428)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3428)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3428
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_364721"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..672
                     /locus_tag="VIQ50_07915"
     CDS             <1..672
                     /locus_tag="VIQ50_07915"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9360342.1"
                     /translation="AGFAHLAMQDAAAAADELERCMRELKFCGAMINGHTNGKYLDDR
                     AFDPFWERAQALDALIYLHPTDPVTPAPVLEGHTGLRRATWEWTFETGSHALRIVFGG
                     VFDRFPRARLALGHLGETIPFLLWRFDSRSGPDFYAVKLAKRPSQYVKENVLVATSGM
                     CSAEPLNCTINALGYDRVMFAADYPFESVEEAGHFIDNVPLEEGVRNAICSDTAARLL
                     KLPRG"
     gene            831..1838
                     /locus_tag="VIQ50_07920"
     CDS             831..1838
                     /locus_tag="VIQ50_07920"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9360343.1"
                     /translation="MRLSRLILASVAAAALFGAGAAQADDPVKIRLSWVAPVTNWASI
                     LLEKKDLARHLGKSYTLEPVRFAGTPPMVTALANGELEVANLAYSTLAIAIQNAGMDD
                     LRIIADEFRDGVQGYYSQEYMVLADGPIKKVDDLKGKVVMTNAAGSAVDVAMRAMLRK
                     FGLEDKRDYTMVEAAFPTMRAMLSEKKVDMIPAVVPFSYDPELRKLSRTLFIQRDAIG
                     VTDMIVWTARKPFLDKNRAAMVDFMEDTLRITRWFLDPKNHKEAMEIAGRVTKQPPER
                     FDWLFTARDAYHDPNMQPDLAALQRNVDMTHDLGFVKTAPDVKKHADLSIVEEAAKRL
                     Q"
     gene            2553..2828
                     /locus_tag="VIQ50_07925"
     CDS             2553..2828
                     /locus_tag="VIQ50_07925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360344.1"
                     /translation="MTDYWVSKLFFDLQQDAKLAAEYRADMPGVLARYDIKPDIRKAL
                     LEDDVGEIAPLVNAYLLRFYFQIRGMPQDEFIARLHALKARKGKADG"
     gene            2821..>3428
                     /locus_tag="VIQ50_07930"
     CDS             2821..>3428
                     /locus_tag="VIQ50_07930"
                     /inference="COORDINATES: protein motif:HMM:NF014899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-dihydroxyphenylpropionate 1,2-dioxygenase"
                     /protein_id="HEY9360345.1"
                     /translation="MADLVGAFAASHGPIIARDWETMAADHRDRLAAGFDELGRRLKA
                     CRPDVLVVISPDHWVNFFISNLPAVCIGIGEEHDGPPEPFMRKVFPRERLKGHAAFGR
                     HLLQTALDGDFEPALSHRLKLDHGTCIPLWRIDVDPTMPIVPLIINDLEEPMPSIRRC
                     LAWGRLLRQAIESYPEPLRIAVLGTGGLSHSIGEPTMGWIDE"
BASE COUNT          653 a         1117 c         1067 g          591 t
ORIGIN      
        1 gccggcttcg cgcatcttgc catgcaggac gccgccgccg ccgcggacga gctcgaacgc
       61 tgcatgcgcg aactcaaatt ctgcggcgcc atgatcaacg ggcataccaa cggaaagtac
      121 cttgacgatc gcgccttcga cccgttctgg gaacgcgcgc aggcgctgga tgcgctgatc
      181 tatttgcacc cgacggaccc cgtcacgccc gcgcccgtct tggaaggaca caccgggctg
      241 cggcgcgcca cctgggaatg gactttcgag accggctcgc acgctttgcg catcgtgttc
      301 gggggcgtgt tcgatcgctt tccgcgcgcg cgcctcgcgc tcggacattt gggcgaaacc
      361 atccccttcc tgctctggcg cttcgacagc cgcagcggac cagacttcta tgcggtcaag
      421 ctcgcgaaac ggccgtcgca atacgtgaag gagaacgtcc tcgtggcgac atcgggtatg
      481 tgctccgccg agccgctgaa ctgcacgatc aatgcgctcg gctacgaccg cgtgatgttc
      541 gccgccgact atccgttcga atcggtcgag gaagcgggac atttcatcga caacgtgccg
      601 ctcgaggaag gggtgcgaaa cgccatatgc tccgacaccg cggcaaggct tctgaaattg
      661 ccgcgcgggt aacgcctgta ggctctccgc agccgaaacc cgcggcgtat cgcaggagcc
      721 atctcggcag gaaggtgcgc caattcggcg cttgccaaga ctgctgccgc tctgcaacgt
      781 ggcatcaaca tcggctcaag gccggaaaaa tccgcagcag gaggaagccc atgcgtttat
      841 cgcgattgat actggcgagc gttgctgccg ccgcgctttt cggcgcgggc gcggcgcaag
      901 ccgacgatcc cgtaaaaatc cgcctgtcct gggtcgcccc ggttaccaac tgggcctcga
      961 tcctgctgga gaagaaggac ctcgcgcgcc atctcggcaa gtcctacacg ctcgaaccgg
     1021 tgcgcttcgc cggcaccccg cccatggtga ctgcgctcgc caacggcgag ctcgaggtcg
     1081 ccaatctcgc ctattccacg ctcgcgatcg caatccagaa tgccgggatg gatgacctgc
     1141 gcatcatcgc cgacgagttc cgcgacggcg tccaaggcta ttactcgcag gaatacatgg
     1201 tcctcgccga cggaccgatc aaaaaggtcg acgatctcaa gggcaaagtg gtgatgacca
     1261 acgcggccgg cagcgcggtt gacgtcgcca tgcgcgcgat gctgcgcaag ttcggcctgg
     1321 aggacaaacg cgattatacg atggtcgaag cagcctttcc gaccatgcgc gctatgttgt
     1381 cggaaaaaaa ggtggacatg attccggcgg tcgttccctt ctcctacgat cccgagctgc
     1441 gcaagctcag ccgcacgctg ttcatccagc gcgatgccat cggcgtgacc gacatgatcg
     1501 tgtggaccgc gcgcaaaccg ttcctcgaca aaaatcgggc cgccatggtc gacttcatgg
     1561 aggacacgct gcgcatcacg cgctggttcc tcgatcccaa gaaccacaag gaggcgatgg
     1621 agatcgcagg ccgcgtcacc aagcaaccac ccgaacgctt cgattggctc ttcaccgcgc
     1681 gcgatgccta tcacgacccc aacatgcagc ccgatcttgc ggcgctgcag aggaacgtcg
     1741 acatgacgca cgatctcggc ttcgtaaaaa ccgcgcccga cgtcaagaag cacgccgacc
     1801 tgagcatcgt ggaagaggcc gcgaagcgct tgcaataggc gcgaacgaca gatcgacaaa
     1861 gccgcatggc tccatccgct cgcacaaaca ttgcgtaaaa aaggcgggcc ccgtggaccc
     1921 gccttgcaac aggcgatggt gacggttctc gttatttgac cgggcgcgac cgctgatcgg
     1981 aacacgcgcc ccagtagccg acgccgaaat cgtcattggt ggggatccag cacgaaccgc
     2041 gctgttgagc gttcgccgcg ggcggagatg cgggtgcaga cccctgctct tgcgcctgcg
     2101 ggcgctgccg ttgcgtttgc gcgaccgacg gcatcgccgt gctcaatgcg agaaccgata
     2161 agacgccgag gaccaatgcc ggttccaact ttctaatagc catcttgtag ctccgtgtgt
     2221 gctcgtcgcc cgccgcaaat gaacgggcct gccgcgggca cgttccgcaa tccgccgttt
     2281 tggaggagag ctctgcagta tcggaatgga gattcgcagc gctggagtgt gcggcacggc
     2341 gattgcttca tagtcggcgc gccaatcgtt catgcggatt ttacacggga cgcccaccgg
     2401 cgaccaaagc tctcgcgctc tctagtcagt cctcgtgaga gggccgttcg ggcgcaaggt
     2461 ggacgcggcc gccgccattc gccatgggcg gcagtgcagg ctaatatcgc tcgcgccgtc
     2521 gggtggaaat cgcagacggc gtcggagcgg caatgaccga ttactgggtg agtaagctct
     2581 tcttcgatct gcagcaggat gcgaagctcg ccgcggaata tcgcgccgac atgcctggcg
     2641 tgctcgcgcg ctacgacatc aaaccggaca tccgcaaggc gttgctcgaa gacgacgtgg
     2701 gcgagatcgc gccgctggtc aacgcctatc tgctgcgctt ctatttccag atccgcggca
     2761 tgccgcaaga cgagttcatc gcgcggctgc acgcgctcaa ggcaaggaaa ggaaaggcgg
     2821 atggctgatc tcgtgggcgc attcgcggcc agtcacgggc cgatcatcgc gcgggattgg
     2881 gaaacgatgg cggcggacca ccgcgaccgg ctggccgcgg gctttgacga gctcgggcgg
     2941 cgcctcaagg cctgccggcc ggacgtgctc gtagtcatct cgcccgatca ctgggtcaac
     3001 tttttcatca gcaacctccc cgcggtctgt atcggtatcg gcgaggagca cgacggcccg
     3061 ccggaaccgt tcatgcggaa ggtgtttccg cgcgagcggc tcaaagggca cgccgcgttc
     3121 ggccgccacc tgctgcagac cgcgctcgat ggcgatttcg aacccgcgct gtcgcatcgc
     3181 ctcaagctcg accacggcac ctgcatcccg ctctggcgca tcgacgtcga tcccacgatg
     3241 ccgatcgtgc cgctgatcat caatgacctg gaggagccga tgccgagcat ccggcgctgc
     3301 ctcgcctggg gccggctgct gcggcaagcg atcgagagct accccgagcc attgcggatc
     3361 gcggtgctcg gcaccggcgg cttgagccac tcgatcggcg agccgaccat gggctggatc
     3421 gacgagga
//
LOCUS       DATCWM010000407         2631 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_100274, whole genome shotgun sequence.
ACCESSION   DATCWM010000407 DATCWM010000000
VERSION     DATCWM010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2631)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2631)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2631
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100274"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..464
                     /locus_tag="VIQ50_07935"
     CDS             <1..464
                     /locus_tag="VIQ50_07935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016841110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9360346.1"
                     /translation="RERIPLYTAFIIDALSLPRLGESALGIPGAQHWVIDLPNEANKK
                     FVIDFKKKYGRNPSFYAAQAYDAAMLINSGVGAVAGDLTNKDGIRDALRKANYQSVRG
                     PYKYGNNHFPIQNFYLQEAVKDEGGSYSLKTIALALKDHQDRYHDKCGMTW"
     gene            593..2473
                     /locus_tag="VIQ50_07940"
     CDS             593..2473
                     /locus_tag="VIQ50_07940"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY9360347.1"
                     /translation="MVATQLLDREALRRKSAPLLLCERTHTAPEAIAFRSKHLGLYRE
                     RTWRDYAGLVARAARAFSALGLRRGDRVAIMGDACEEWVISDLAAQALGAIVYGIYPT
                     ASASELEYQMRDGGAALFIAENQEYLDKLLPFADRLPALSWIVVIDDTAMFGYQHPKL
                     RGYRALLEAAGEPDLAWLEQQAARLDADAPAFIVYTSGTTGAPKGALVSHGKHLAAAA
                     NIVDHYPTLAQKEHRTVGYLPLCHVLGRDVAVTLPLISRLVPHFGEHPEDLPTTLFET
                     APTILFTVPRYLQRFAAQVLLGIRNSGGVKRASAEIAMHIARAHTRRRWNSAASLAER
                     ALYRACRAGVFVPILNKLGFGQLGLVVCAGAPLPPQTMALWQMLGINVVEMYGQTETA
                     GGIICGQRGPFPRPGDVGTVPAGWQVKLASDGEVLVKSPDLFDSYWNNPDATRAVKGE
                     DGWLRTGDIGEWNAGALRLLDRARDFIVTSGGKTISPSFVENILRASPYIAEAIVFGH
                     GRKYLAALIEIEADTVADWARNHDVPYAGFTSLASNAEVARLIGIEVERANGELSRPE
                     QIKAFRILPKALDPEEEGEPITPTRKVKRHLMYERFKGLVEEMYDDREQRLIAAGAVE
                     VA"
BASE COUNT          502 a          865 c          817 g          447 t
ORIGIN      
        1 tgcgggagcg gatcccgctc tacaccgcct tcatcatcga tgcgctgtcg ttgccgcggc
       61 tcggcgaatc ggcgctcggc ataccgggag cgcagcattg ggtgatcgac ctgccgaacg
      121 aggccaacaa aaaattcgtc atcgatttca agaaaaaata cggacgtaat ccgtccttct
      181 atgcagccca ggcctatgat gcggccatgc tcatcaacag cggcgtcggc gcagtcgcgg
      241 gagatctcac caacaaggat ggcattcgag acgcgctacg caaagccaac tatcaatccg
      301 tgcgcggccc gtacaaatac ggcaacaacc acttcccaat ccagaacttc tatctgcagg
      361 aagccgtgaa agacgagggt ggctcgtata gtctcaagac gatcgccctt gcgctgaagg
      421 accatcaaga tcgctatcat gacaagtgtg gaatgacctg gtgacttcca cctgggcgcc
      481 gatctcgcaa ttaaccagct ttggcgctga gcccatccgt ctatcaggct atagaattcg
      541 cctcccgcct gggttatagc agttcgattg gaagccggtt cgcggacgcc gcatggtcgc
      601 aacgcaattg ctcgatcgcg aagcgctgcg tcgcaaatcc gcaccgctgt tgctgtgcga
      661 gcgaacgcac acggcaccgg aagcgattgc cttccggtcc aagcacctgg gcctctaccg
      721 cgaacgaacc tggcgcgatt atgcagggct agtcgcgcgc gcggcacgcg ccttttccgc
      781 gctcggactt cgccgcggcg accgggtggc gatcatgggc gacgcctgcg aggaatgggt
      841 gatcagcgac cttgcggcgc aagcgctcgg cgccatcgtc tacggcatct acccgaccgc
      901 gtcggcatct gaactcgagt accagatgcg cgacggcggc gccgcgctgt tcatcgcgga
      961 aaatcaggaa tacctcgata agctcctgcc gttcgccgat cgactcccgg cattgagctg
     1021 gatcgtggtg atcgacgaca ccgcgatgtt cggctaccag caccccaagc tccgcggcta
     1081 tcgtgccctg ctcgaggcgg ccggagagcc ggatcttgca tggctcgagc agcaagccgc
     1141 gcgactcgat gcggacgcac ccgccttcat cgtctacacc tcgggcacga ccggcgcgcc
     1201 caaaggagcg ttggtgagcc atggcaagca tctcgcggct gccgccaaca tcgtcgatca
     1261 ctaccccacc ctcgcgcaaa aagagcaccg cacggtcggc tatttgccgt tgtgccacgt
     1321 gctcggccgt gacgtcgccg tcacgctgcc gctgatctcg cgcctggtgc cgcatttcgg
     1381 cgagcacccg gaggatctgc cgaccaccct gttcgagact gcgccgacaa tcctattcac
     1441 cgtcccgcgc tacctgcagc ggttcgccgc acaggtgctg ctcggaatcc gcaactccgg
     1501 cggcgtcaag cgcgcaagcg cggagattgc catgcacatc gcgcgcgcac acacgcggag
     1561 gcgctggaat agcgcggcga gcttggctga acgcgcgctc tatcgcgcct gccgtgctgg
     1621 cgtcttcgtg ccgatcctca acaagctggg gtttggccag ctcgggctcg tagtctgcgc
     1681 cggcgcgccg ctgccgccgc aaacaatggc gctctggcag atgctcggca tcaatgttgt
     1741 cgaaatgtac gggcaaaccg agaccgccgg cggcatcatc tgcggccagc gtgggccgtt
     1801 tccgcgcccg ggcgacgtcg ggaccgtacc ggcgggttgg caggtcaagc tcgcaagcga
     1861 cggcgaagtg ctggtgaaga gccccgatct cttcgactcc tattggaaca atccggacgc
     1921 aacccgcgcg gtcaagggcg aggacggctg gctgcgcacc ggcgacatcg gggagtggaa
     1981 cgccggcgcc ttgcgtctcc tcgaccgcgc gcgcgatttc atcgtcacct ccggcggcaa
     2041 gaccatctct ccgtccttcg tcgaaaacat cctgcgcgcc agtccctata tcgcggaagc
     2101 gatcgtattc ggccacggtc gcaaatatct cgctgcgctc atcgagatcg aggccgatac
     2161 ggtggcggat tgggctcgca accacgatgt gccctacgcg ggcttcacca gtctcgccag
     2221 caatgccgag gtggcgcggc tgatcggcat cgaggttgag agggcgaacg gcgagctgtc
     2281 gcggcccgag caaatcaagg cgtttcgcat tctccccaag gcgctcgacc cggaggagga
     2341 gggcgaaccg atcactccga cccgcaaggt gaagcgccac ctaatgtacg agcgcttcaa
     2401 gggcctcgtc gaagagatgt acgatgaccg cgagcagcgg ctgatcgccg ccggcgcggt
     2461 ggaagtcgca tgaatgcgac cagaccaggg aggaatgcaa tgttggcacg agttctggcg
     2521 gccgcactgg ccgcggcggc gctggtatgt tcggccaatg cacaggacgc ctacgtcatc
     2581 ggcgtcaccg gcgcgctgac ggggccggca gcgggcacca acggaccgcc g
//
LOCUS       DATCWM010000408         2440 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_532282, whole genome shotgun sequence.
ACCESSION   DATCWM010000408 DATCWM010000000
VERSION     DATCWM010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2440)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2440)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2440
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_532282"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..683)
                     /gene="ribD"
                     /locus_tag="VIQ50_07945"
     CDS             complement(<1..683)
                     /gene="ribD"
                     /locus_tag="VIQ50_07945"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008962380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HEY9360348.1"
                     /translation="MSSAEDARFMALALALGRRSLGRAWPNPAVGAVIVKDGVIVGRG
                     WTQPGGRPPAEIEALVRAGAAAEGATLYVTLEPCSHYGKTPPCADAIIKAGIARVVSA
                     LVDPNPEVAGAGHWRLAQAGIVVEVGIGAEEARRAHAGHIRRIEAGRPHVIFKLAVSA
                     DGKVARSDRSPTPITGEAARARVHLMRARSDAVLTGIGTIIADDPLLTCRLPGMSSPV
                     RVVLDGQLRL"
     gene            complement(732..1586)
                     /locus_tag="VIQ50_07950"
     CDS             complement(732..1586)
                     /locus_tag="VIQ50_07950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY9360349.1"
                     /translation="MEIAMSFKTILVPVEQHDLMNSTLSAALLLAQKFDSHIEGFALR
                     VAMPTAFALGDVGPLPIPALEQEIVDNEKRSRSLFESFMQEHGVPLAADSKTPSSGWL
                     ENAPEGDHFVGSNGRVFDIIVLGKPGRDPKGPRMTTLEAGLFDSGRPVLIAPPSPQPQ
                     MGANVLIAWNCSTEQARATAFAMPILKRASRVTVLTVEGGAAVPGPSGQQLCRYLQLN
                     GVSAKPLTVGLDGRLTGEVILAHAKALGCDLLIKGAYTQSRLRQMIFGGTTRHILSNT
                     ELPVLMAH"
     gene            complement(1656..2135)
                     /gene="nrdR"
                     /locus_tag="VIQ50_07955"
     CDS             complement(1656..2135)
                     /gene="nrdR"
                     /locus_tag="VIQ50_07955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011927287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140110 - transcription regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HEY9360350.1"
                     /translation="MRCPNCGSLDTQVKDSRPTEDSSVIRRRRVCLACNFRFTTFERV
                     QLRELVVIKRNGRRVPFDRDKLLRSVQIALRKRPVEPERIDQAVSKIVRELESQGESE
                     VSSEAVGEMVMEALRALDDVAYVRFASVYRNFREAKDFESVLDELSEDGKPGAAVRK"
BASE COUNT          422 a          804 c          771 g          443 t
ORIGIN      
        1 agccgcagct gtccatcgag cacgacacgc accggcgagg acattcccgg cagacggcag
       61 gtcagaagcg ggtcgtcggc gatgatggtg ccgatgccgg tgagcacggc atcgctcctc
      121 gcgcgcatca aatgcacccg cgcgcgcgcc gcctcgccgg tgatcggcgt agggctgcgg
      181 tcggagcggg caactttgcc gtcggcagag acggcgagct taaagatcac gtgcgggcgg
      241 cccgcctcga tgcgccggat gtggccggca tgcgcccgcc gcgcttcctc cgcgccaatg
      301 ccgacctcga cgacgatgcc ggcttgggcc aagcgccaat ggccagcgcc cgcgacttcc
      361 ggattgggat cgaccagcgc cgacaccacg cgtgcgatgc cggctttgat gatggcgtcg
      421 gcgcagggcg gtgtcttgcc gtaatgcgag cacggctcga gcgtgacata gagcgttgcc
      481 ccctctgcgg cggcaccggc gcggacgagc gcttcgattt cggcaggggg tcggccgccg
      541 ggctgcgtcc agccgcgacc gacgatcacg ccgtccttca cgatcaccgc gccgacggcg
      601 ggattgggcc aggcgcgccc caggctgcgt cggccaagcg cgagcgccag cgccatgaag
      661 cgggcatcct ccgcgctact catggtcggc gtcactcaag gcatcgaatt ccaacttcgc
      721 tcgcggggcc ttcagtgtgc catgagtacc ggcagttccg tgttgctcag gatgtggcgg
      781 gtggtaccgc cgaagatcat ctgccgcagt ctactctggg tgtaggcacc cttgatcagg
      841 aggtcgcagc ccaacgcctt ggcgtgcgcc aagatcacct cacccgtgag gcggccatca
      901 aggccgacgg tcaagggctt tgccgatacc ccgttcaatt gcagataacg gcacagttgc
      961 tgcccgctgg gccccggtac cgctgctccg ccctcgaccg tcaacaccgt cacccggctg
     1021 gcgcgcttga ggatgggcat cgcaaacgcc gtggcgcgcg cttgctcggt gctgcaattc
     1081 catgcgatca gaacattcgc gcccatctgc ggctgcggcg atgggggtgc gatcaagaca
     1141 ggccggccgc tatcaaacaa gccagcttca agtgtggtca tccgcgggcc tttcggatcg
     1201 cgaccgggct ttcccaacac aatgatatcg aacactcggc cattgctacc gacaaagtgg
     1261 tcaccctcag gggcgttttc caaccacccg cttgagggag ttttgctgtc ggctgcgagc
     1321 ggcacgccat gctcttgcat gaaactttcg aaaaggcttc ggctccgttt ctcgttgtcc
     1381 acgatctcct gctccaatgc cggtatcggc agaggaccta cgtcgcccag cgcgaaggca
     1441 gtgggcatcg caactcgcaa cgcgaacccc tcgatgtggc tgtcgaattt ttgtgcgagc
     1501 agaagagcgg cgctcaaggt cgagttcatg aggtcatgct gttcgactgg cacaaggatc
     1561 gtcttgaaac tcatggcgat ctccactcgt gtcgcagctc gccccggcgt gcgcgcatcg
     1621 atggggtgaa aggcgccttt tcggcgcctt ttggctcact tcctaaccgc cgcgcccggc
     1681 ttgccgtcct ccgacagctc gtcgagcacg ctttcgaagt ccttggcctc gcggaagttg
     1741 cgatagaccg acgcaaagcg cacgtaagca acgtcgtcga gcgcgcgcag cgcctccatc
     1801 accatttcgc cgaccgcctc ggaagaaacc tcgctctcgc cctggctctc gagttcgcgc
     1861 acgatcttgg agaccgcctg atcgatgcgc tccggctcga cgggacgctt gcgcaatgcg
     1921 atctgcaccg aacgcaggag cttgtcccgg tcgaagggca cgcggcggcc gttgcgcttg
     1981 atcaccacca gctcgcgcaa ttgcacgcgc tcgaaggtgg taaagcgaaa attgcaggcg
     2041 agacacacgc gccggcggcg gatgacggag gaatcctcgg tcggccgcga gtccttgact
     2101 tgcgtatcga ggctgccgca attcggacaa cgcatgggcg gcccctactc tctcgcagtc
     2161 attcctgggc gcggctgaaa gccgcgagcc tcaaatccat caccaccgtt gatgcgtgcg
     2221 acaggcctgt ggctgtggat tgcggttcgc gcgccgatgc gtgcagtccg actgatgaag
     2281 gagcgattgg tcccatggga cctcagcctt gataaatggg aaatcgactg acgagcttcc
     2341 tgaccttctc gcgcactgcg gcttcggtga gcgagtcctc gtcgacgccc ttctgcgaga
     2401 ggacgtcgag cagctcgacg atcagctcgc cgacttcttg
//
LOCUS       DATCWM010000409         2211 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_424079, whole genome shotgun sequence.
ACCESSION   DATCWM010000409 DATCWM010000000
VERSION     DATCWM010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2211
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_424079"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            91..1650
                     /locus_tag="VIQ50_07960"
     CDS             91..1650
                     /locus_tag="VIQ50_07960"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HEY9360351.1"
                     /translation="MLQTRPDAMSVARKPVAFGDLRGWIAALKAQGELAEIDVEVDWN
                     IELGTIMRLAQGPGTGKALIFNNIKDYNTPASRCRRIFGSALNNYRRIAMMLGLPPDS
                     HPRELVKIARTILSGTVAPKIVATGPAKENILTGADIDLYEFPAPHWNRLDGGRYLLT
                     YGGCVTKDPDTGIMNVGIYRGMVAGHDRIPILMWRAQHIGHHVTAWQQGGSAEMPIAV
                     AVGWEPSLGFCAGAPVPKGVCEYDVMGAIRGAPVELVKCETVDLYVPASAEIVIEGFL
                     GLDPATYTMEGPYAEFTGYVAGDRSPKPTIRVTTITHRNDPILRGTIEGSLPGSYSEN
                     AVCSSIMRAATAWNVLDRAGVPGITDVWCPPVQAGINLLIRMKPSYRNQAKQAANAIW
                     GSSAAHVRYKHITVVDDDIDIHDYAAVDWAIAHRVNAGENDVVIMPATFGLGLDPSVR
                     KRDRNPALFGTGKWNRVLIDATMNLDYDPDPDYGGARFPPTVWPDKADVEKAYARWRE
                     LGLGKPKGAGD"
     gene            1714..>2211
                     /locus_tag="VIQ50_07965"
     CDS             1714..>2211
                     /locus_tag="VIQ50_07965"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEY9360352.1"
                     /translation="MTEQPVTFPSAGLKLSGVVHLPRGLRPTERRGAFLVLHGFGSNK
                     TSSNTMQPTKVLSELGYVVLRFDMRGCGESEGEFGRVICLEQVEDTRNALSFLAQHPA
                     VDPARIGVIGSSFGGAVAVYTGGVDARVAAVISNGGWGDGERKFRGQHRSPEAWARFT
                     NMLKEG"
BASE COUNT          379 a          787 c          711 g          334 t
ORIGIN      
        1 cgcgtcttcc gacgcgctat gcccgccaat gacggcgcat aggccaggcc tagcgggcca
       61 atcattgccg cgcgtggtat agagtgtcgc atgctccaga cccgacccga tgccatgtcc
      121 gtcgcgcgca agcccgtcgc cttcggtgat ctgcgcggct ggatcgccgc gctcaaggcg
      181 caaggcgagc tcgccgagat cgacgtcgag gtcgactgga acatcgagct cggcaccatc
      241 atgcgcctgg cgcaaggtcc cggcaccggc aaggcgctca tcttcaacaa catcaaggac
      301 tacaacacgc cggcgagccg ctgccggcgc attttcggct ccgcgctcaa caactatcgc
      361 cgcatcgcca tgatgctggg gctgccgccc gacagccatc cgcgcgagct ggtcaaaatc
      421 gcccgcacca tcttaagcgg caccgtcgcg cccaagatcg tcgccacggg gccggcgaag
      481 gagaacatcc tcaccggcgc cgacatcgat ctctacgagt ttcccgcgcc gcattggaat
      541 cggctcgacg gcggacgcta tctcctcacc tacggcggct gcgtcaccaa ggatcccgat
      601 accggcatca tgaatgtcgg catctatcgc ggcatggtcg ccggccacga tcgcatcccg
      661 atcctgatgt ggcgcgcgca gcacatcggg catcacgtca ccgcctggca gcagggcggc
      721 agcgccgaga tgccgatcgc ggtggcggtc ggctgggagc cctcgctcgg cttctgcgcc
      781 ggcgcgccgg tgccgaaggg cgtgtgcgaa tatgacgtca tgggggcgat ccgcggcgcc
      841 ccggtcgagc tggtcaagtg cgagaccgtc gacctctacg tccccgccag cgccgagatc
      901 gtgatcgaag gctttctcgg gctcgatccc gcgacctata cgatggaagg accctacgcc
      961 gagttcacgg gctacgtcgc cggcgaccgc tcgcccaagc cgacgattcg cgtgaccacc
     1021 atcacccacc gcaacgatcc gatcctgcgc ggcaccatcg agggctcgct ccccggcagc
     1081 tattccgaga acgcggtgtg ctcctcgatc atgcgcgcgg ccaccgcctg gaacgtgctc
     1141 gaccgcgccg gcgtgcccgg catcaccgac gtgtggtgcc cgccggtgca ggccggcatc
     1201 aacctgctca ttcgcatgaa accgagctat cgcaaccagg cgaagcaagc ggcgaacgcg
     1261 atctggggct cctccgcggc gcacgtgcgc tacaagcaca tcaccgtggt cgatgacgac
     1321 atcgacatcc acgattacgc ggcggtggac tgggcgatcg cgcaccgggt gaacgcgggg
     1381 gagaacgacg tcgtcatcat gcccgcgacc ttcggcctcg gcctcgatcc atccgtgcgc
     1441 aagcgcgacc gcaatcccgc gctgttcggc accggcaagt ggaaccgggt gctgatcgac
     1501 gccaccatga acctcgatta cgatcccgac ccggactacg gcggcgcgcg cttcccgccg
     1561 acggtctggc cggacaaggc cgacgtcgag aaggcttatg cccgctggcg cgagctcggc
     1621 ctcggcaagc cgaaaggcgc cggcgattag cccgagtgcg cggcactatt gtgctttaag
     1681 cgaacgagac gcgcataacg gagtcgactg cccatgaccg agcaacccgt cacctttccc
     1741 tccgccgggc tcaagctctc cggcgtggtg cacctgccgc gcgggctgcg cccgaccgag
     1801 cggcgcggcg cgttcctggt gctgcacggc ttcggcagca acaagacctc gtccaacacc
     1861 atgcagccca caaaggtgct cagcgagctc ggctacgtgg tgctgcgctt cgacatgcgc
     1921 ggctgcggcg agagcgaggg cgaattcggc cgcgtgatct gcctcgagca ggtcgaggac
     1981 acgcgcaatg cgctcagctt tctcgcccag catcccgcgg tcgatcccgc gcgcatcggc
     2041 gtgatcggct cgagcttcgg cggcgcggtc gcggtctata ccggcggcgt cgacgcgcgc
     2101 gtggccgcgg tcatctccaa cggcggctgg ggcgacggcg agcgcaagtt ccgcggccag
     2161 caccggagcc cggaggcgtg ggcgcggttc accaatatgc tcaaggaggg c
//
LOCUS       DATCWM010000410         2305 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_224329, whole genome shotgun sequence.
ACCESSION   DATCWM010000410 DATCWM010000000
VERSION     DATCWM010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2305
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_224329"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            171..1277
                     /gene="arsS"
                     /locus_tag="VIQ50_07970"
     CDS             171..1277
                     /gene="arsS"
                     /locus_tag="VIQ50_07970"
                     /inference="COORDINATES: protein motif:HMM:TIGR04167.1"
                     /note="Some members of this family are selenoproteins;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenosugar biosynthesis radical SAM
                     (seleno)protein ArsS"
                     /protein_id="HEY9360353.1"
                     /translation="MHVARGLIRTRFLTRFCPRAAPVNVTRAAGYANLRRQKGLAMHD
                     TWPRLERIAFPSIRRGPLDTLQVNIGYRCNQSCVHCHVNAGPHRKEEMSSEVIDTVLA
                     FLARKRVPALDITGGAPELNPHFRRLVRAARAIGVQVMDRCNLTILEVAGQEDLAHFL
                     ARERVEIVASLPCYLEENVDRQRGKGVFDASIRGLRQLNALGYGRAETGLVVNLVYNP
                     QGSSLPPPQRTLEEDYRRVLGERYGVVFNRLYALANMPIQRFGAILIANGEFERYLDL
                     LRRAHLDANLEHVMCRNLISVDWRGYIYDCDFNQMLDLPLKHDARERVHLSELLDAEI
                     EGQPIRVAGHCYGCTAGQGSSCGGALAQGAERSA"
     gene            1341..2051
                     /locus_tag="VIQ50_07975"
     CDS             1341..2051
                     /locus_tag="VIQ50_07975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007067760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04283 family arsenosugar biosynthesis
                     glycosyltransferase"
                     /protein_id="HEY9360354.1"
                     /translation="MSKLSIIMPVLNEGDGIAAALDALAELRALGTEVIVADGGSRDA
                     TVRQAELRADKVILAPRGRALQMNAGTESASGDVLLFLHADTRLPPEADRVVLSGLDR
                     SRRAWGRFDVKIEGRSPLLPVVARLMGLRSRLTGIATGDQAIFVHREAFQAVGGFPAI
                     ALMEDIALCKRLKRLGRPLCLRACVTTSGRRWEKNGVLSTILLMWRLRLAYFFGADPK
                     DLARQYGYDRNDCHRSAR"
     gene            2017..>2305
                     /locus_tag="VIQ50_07980"
     CDS             2017..>2305
                     /locus_tag="VIQ50_07980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360355.1"
                     /translation="MTETIAIAVLAKAPLPGFAKTRLIPALGTEGAARLQARLVEHAV
                     ATACAARIGPVTLWGAPDESHPLFQAIGARLGVALARQDGGDLGERMLAAVA"
BASE COUNT          386 a          737 c          760 g          422 t
ORIGIN      
        1 ctcgactttc gccaccccgc cgtgaaactc ccgggctttg gccgcatcgg cgtcgctgat
       61 ggaagcgcga ttgcggcccc ggcacgggcg aattgaccgc tctggcgccg ccgggccaat
      121 tagcgcgcag caagatgaga agcgaccgct cgaaagcgag caccgcgccc atgcacgtcg
      181 cgcgagggct gatccgcacg cgattcctca cgcggttttg tccgcgagca gcaccggtca
      241 acgtgacgcg cgcggcgggc tatgcgaacc tgcgtcggca aaaagggtta gcaatgcacg
      301 atacctggcc gcggcttgaa cggattgcct ttccgtcgat tcgacgcggg ccgctggata
      361 cgctgcaagt caacatcggc tatcgctgca accaatcgtg cgtccactgc cacgtgaatg
      421 ccggaccgca ccgtaaagaa gagatgtcga gcgaagtgat cgacacggtc ctggctttcc
      481 tcgcaagaaa gcgcgtgcct gccctcgaca tcacgggcgg cgcgccggaa ctcaacccgc
      541 actttcgcag gctagtacgc gcagcgcggg cgatcggcgt gcaagtcatg gatcgctgca
      601 atctcaccat tcttgaagtc gccgggcagg aagatctcgc gcatttcctt gcacgcgagc
      661 gggtcgagat cgtcgcttcg ctgccctgct atctcgaaga gaatgtcgac cgtcagcgcg
      721 gcaagggcgt cttcgacgca tcgatccgcg gacttagaca gctcaacgcg ctcggctatg
      781 ggcgggccga aaccggactc gtagtcaacc tcgtttataa tcctcaaggc tcctcgctgc
      841 cgccgccgca gcgaacgctg gaggaggatt acaggcgcgt gctgggggag cgctacgggg
      901 ttgttttcaa ccgtctctac gcgcttgcca acatgccgat ccagcgcttc ggcgcaattc
      961 tgatcgcgaa cggggagttt gagcgctacc tcgatctgct gcggcgggcg catctcgatg
     1021 ccaacctcga gcacgtcatg tgccgaaatc tgatttcggt cgattggcgc ggctatatct
     1081 acgactgcga ttttaatcag atgctcgacc tgcccctcaa acatgatgcg cgcgagcgtg
     1141 tacatttgtc ggagctgctt gacgccgaaa tcgagggtca gccgatccgg gttgccgggc
     1201 actgctacgg ctgtactgcc ggacagggtt cgagctgcgg cggcgcgctg gcgcaaggcg
     1261 cggaacgctc cgcttgatcg tttgggcgcc tggcgtgtcg ctgtgagccg gagcgccgtc
     1321 tgccggcgca cgatgcccac atgtcaaagc tctcgatcat catgcccgtg ctgaacgaag
     1381 gcgacggtat cgctgcggcg ctcgatgcgc tcgccgagct gcgagcgctc ggcaccgaag
     1441 taatcgttgc cgacggcggc agtcgtgacg cgaccgtccg gcaagcagaa ttgcgcgccg
     1501 acaaggtcat cctggcgccg cgagggcgcg cgctgcagat gaacgcgggc actgaaagtg
     1561 cgtccggcga cgtcctgctt tttcttcatg ccgatacgcg gcttccgccc gaggccgacc
     1621 gcgttgtact cagcggcctc gaccggtcgc gccgtgcctg gggccgcttc gacgtcaaga
     1681 tcgagggccg ctcgccgctg ttgcccgtcg ttgctcggct gatgggcctg cggtcgcgcc
     1741 tcaccgggat cgcaacgggc gaccaagcga tattcgtgca ccgcgaggcg ttccaggcag
     1801 tgggcggctt tccggcaatt gcgttgatgg aggacattgc gctgtgcaaa cggctcaagc
     1861 gcctgggtag accgctgtgc ctgcgcgctt gcgtgaccac ttccggtcgg cgctgggaga
     1921 agaacggcgt gctcagcaca atcctgctga tgtggcgctt gcgactcgcg tatttcttcg
     1981 gtgccgatcc gaaagacctc gcgcggcaat acggttatga ccgaaacgat tgccatcgca
     2041 gtgctcgcta aggctccgct gccggggttc gccaagacgc ggctcattcc cgcgctgggc
     2101 accgagggcg ccgcgcggtt gcaggcgcgc ttggtggagc acgcggttgc aaccgcatgc
     2161 gccgctcgga ttggcccggt gaccttgtgg ggcgcccctg acgagagcca tccgctgttt
     2221 caggcgatcg gagcacgcct cggcgtcgcg cttgcgcgcc aggacggcgg cgacctcggc
     2281 gagcggatgc tggccgcggt cgcgg
//
LOCUS       DATCWM010000411         2364 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_424085, whole genome shotgun sequence.
ACCESSION   DATCWM010000411 DATCWM010000000
VERSION     DATCWM010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2364)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2364)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2364
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_424085"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..698
                     /locus_tag="VIQ50_07985"
     CDS             <1..698
                     /locus_tag="VIQ50_07985"
                     /inference="COORDINATES: protein motif:HMM:NF023568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY9360356.1"
                     /translation="PPLCGAPEAAEQLAAAVRFILEQQAVPRLSIIAHSWGSIPAARF
                     AGAHPALIDRLVLFGPVARRPPRRYEKPPSAPAWQVVTLGAQWARFTEDVPAQEPPVL
                     SRAHFDAWGERYLDSDPDSRRYDPVGVKIPTGPFNDIIHAWHGELAYDPAFVQAPVAI
                     IRGEWDGVIPDEDARWLFDAFTAAPIKRDIKISRATHLMHLEAMRYALYRESIGFLLG
                     GDRAPMPQGAPPH"
     gene            767..1480
                     /locus_tag="VIQ50_07990"
     CDS             767..1480
                     /locus_tag="VIQ50_07990"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010686871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEY9360357.1"
                     /translation="MFAVIFEVQPKAEKFNDYLDLAKFLKPKLESIEGFIDNERFESK
                     RTKGRVLSLSTWADEKAVIRWRTQGEHHGVQEKGRSEVFEDYHLRVGEITADTGPPKG
                     VAVREQRFDATEIGEAKLVTITELEPREKSTLGAKADQLGAHLGLRAGTDGLIDQEVF
                     ESIYNPGKLLLLAGWRDAEAAKAWTPTKPYAAASLRHRHVRIIRDYGMFDRREAPQFY
                     PDVKRAADAAPQARKRAVG"
     gene            complement(1538..2158)
                     /locus_tag="VIQ50_07995"
     CDS             complement(1538..2158)
                     /locus_tag="VIQ50_07995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEY9360358.1"
                     /translation="MLPDDTRFITDEASLRALHPQPMLRATNKVLQALDKHCRRIISL
                     SPFCVVATQGPNGADVSPRGDPAGFVRVLDDVTLLLPDRVGNNRLDNMTNLLVNPRIG
                     LLFLVPGMNETLRINGTARITDDARLLTPSAVNNRAPKVGIVVTVEEAFLHCAKALVR
                     SALWDGSQRIDRSILPSYAQMLLEQVKGLTHEENERQSRIMAERGP"
BASE COUNT          424 a          760 c          791 g          389 t
ORIGIN      
        1 atccgccgct ctgcggtgcc cccgaggctg cggagcaact cgccgcggcg gtgcgcttca
       61 tcctcgagca gcaggcggtg ccgcggctct cgatcatcgc gcattcgtgg ggcagcattc
      121 ccgccgcgcg ctttgccggc gcgcatccgg cgctcatcga ccgtctcgtg ctgttcggtc
      181 cggtggcgag gcgtccgccg cggcgctacg aaaagccgcc aagcgcgccg gcctggcagg
      241 tcgtgacgct cggggcacaa tgggcgcgct ttacggagga tgtgcctgcg caggagccgc
      301 cggtgctttc gcgcgcgcac ttcgacgctt ggggcgagcg ctacctcgac agcgacccgg
      361 acagccgccg gtacgatccg gtcggcgtga agattccgac cgggccgttt aacgacatca
      421 tccatgcgtg gcacggcgag ctcgcctacg atccggcgtt cgttcaggcg ccggtcgcga
      481 tcattcgcgg cgaatgggac ggcgtgatcc ccgacgagga cgcgcgctgg ctgttcgatg
      541 ccttcacggc ggcgccgatc aagcgcgaca tcaagatcag ccgcgcaacc catctgatgc
      601 atctcgaggc gatgcgctac gcgctctacc gcgagagcat cggcttcctg ctcggcggcg
      661 accgcgcgcc gatgccgcag ggcgcgccgc cgcactgagg gcgccattgc gcggtgcatc
      721 gccggacggc gcatcgggaa ggaacggaac aacaggagag ccagccatgt ttgcggtgat
      781 cttcgaagtg cagccgaagg cggagaagtt caacgactat ctcgacctcg ccaagtttct
      841 aaagcccaag ctcgagtcga tcgagggttt catcgacaac gagcgcttcg agagcaagcg
      901 caccaagggt cgcgtcctgt cgctctcgac ctgggccgac gagaaggcgg tgatccgctg
      961 gcgcacccag ggcgagcatc atggcgtgca ggaaaagggc cgttccgagg tgttcgagga
     1021 ctatcacctg cgggtcggcg agatcacagc cgacaccggg ccgcccaaag gcgtcgccgt
     1081 cagggagcag cgcttcgacg caacggagat cggcgaggcc aagctcgtca ccatcacgga
     1141 gctcgagccg cgggagaaga gcacactcgg cgcaaaggcc gatcagctcg gtgcccatct
     1201 cggcctgcgc gccggcacgg acgggctcat cgatcaagag gtattcgaga gcatctacaa
     1261 tcccggtaag ctgttgctgc tcgccggctg gcgggatgcc gaggctgcca aggcatggac
     1321 gccaacgaaa ccctacgctg ccgcgtcact gcgccaccgc cacgttcgca tcatccgcga
     1381 ctatgggatg ttcgatcgcc gcgaggcgcc gcagttctat cccgacgtga agcgcgctgc
     1441 ggatgcggcg ccacaggcgc gcaagcgcgc cgtcggataa atgctcgcgc tcggccgacg
     1501 agagcgtttc ggaccgaaaa cgcacatcaa atcggattta tggcccacgc tcggccatta
     1561 tccgcgattg tcgttcgttt tcctcgtggg tgaggccctt aacctgctcg agcaacatct
     1621 gggcgtagct gggcaggatg gaccgatcga tacgctggct cccatcccag agcgctgagc
     1681 gcaccaacgc cttagcgcag tgaaggaacg cttcctcgac cgtgacgaca atgccaacct
     1741 tcggcgcgcg attgttgacc gcgctcggtg ttaacagccg cgcatcatcg gtgatgcgag
     1801 cggtgccgtt gatgcgcagc gtctcgttca tgccggggac cagaaacaac aaaccgatcc
     1861 gcgggttgac cagcaggttg gtcatgttgt cgagccggtt gttgcccacc cggtcgggca
     1921 gcagcagcgt gacatcgtca agcacgcgca cgaagccggc gggatcgccg cggggcgaga
     1981 cgtcggcgcc attgggcccc tgagttgcga cgacgcagaa tggcgagagc gagatgatgc
     2041 ggcggcagtg cttgtcgagt gcttgaagta ccttgttggt agctcgaagc atcggctgag
     2101 gatgcagagc ccgaaggctc gcctcatcgg tgatgaagcg cgtatcgtca ggtagcatgc
     2161 gttgcctcgg gacgtttcga tttcccggag accaccatag cgcatcttcc ggaccaagtg
     2221 ggaacgcatc ctcgggtggc cgtcgccgcg cgcggcccaa tgcgcgacgg ctgcaggaac
     2281 cgacgagggc tgcaagaggc gccgcgctcg cgcgtcagcc gagcagcgtt tcgttcttgg
     2341 tttccctcgc acacaaggct gcgg
//
LOCUS       DATCWM010000412         4946 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_451248, whole genome shotgun sequence.
ACCESSION   DATCWM010000412 DATCWM010000000
VERSION     DATCWM010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4946)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4946)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4946
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_451248"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1405)
                     /gene="ftsZ"
                     /locus_tag="VIQ50_08000"
     CDS             complement(<1..1405)
                     /gene="ftsZ"
                     /locus_tag="VIQ50_08000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEY9360359.1"
                     /translation="MSINLKIPDVRELKPRITVFGTGGAGGNAVNNMITSGLQGVDFV
                     VANTDAQALTMSKAERIIQMGVAVTEGLGAGSQPEVGRAAAEEAIDEIRDHLQGAHMV
                     FVTAGMGGGTGTGAAPVVARCAKEAGILTVGVITKPFHFEGIRRMRVAEQGIVELQKV
                     VDTLLIIPNQNLFRVANEKTTFADAFAMADQVLYSGVACITDLMVKEGLINLDFADVR
                     AVMREMGKAMMGTGEASGEKRALSAAEAAISNPLIDDASMKGAKGLLISITGGKDLTL
                     YEVDEAATRIREEVDQDANIIVGATFDESLEGVIRVSVVATGIDHVGLQRSVTEPEVR
                     IAELTQKLRAEELRGDVQRVTTERIETRPLATPSVAAPAMSSAESIEAAAKAAVAAAV
                     LPMIEDVTIRPIPPKPSLFPEQMALPSDPPPAPRAFIPPAPERTVNRPRRMPGIDELP
                     RPAQAELRAKRGEGDVDH"
     gene            complement(1487..2806)
                     /gene="ftsA"
                     /locus_tag="VIQ50_08005"
     CDS             complement(1487..2806)
                     /gene="ftsA"
                     /locus_tag="VIQ50_08005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEY9360360.1"
                     /translation="MSGLHFALTPKMKPLPGNRSVLVAALDIGTSKIACLIGRLRPHP
                     PQDGSPLRSHSVEVVGFGHTLARGMKAGTVIDLAEAEAAVRQCADLAERSARMQLDSV
                     VVSISAGRPASEQISASIEVVGSAIGEGDIARVLAAGSRHSARPGRAVLHSLPIGYVL
                     DQARGVQDPRGMLAREFGIDMHVVTADASAARNLMLAIERSHLAVEAMVTSPYAAGLS
                     ALADDEAELGAALVDMGAGTTTLAVFCGARFVHADGFALGGRHVTMDIARGLNARIAD
                     AERIKTLYGSVLTGGSDERDMIAVPPVDKDEREAPHFVSRASLARIIKPRVEEILEMV
                     RDRLAASPFAAEPRGRVVLTGGASQLTGVADLATQILRRPVRVGRPLDIAGLPEEARG
                     GAFAVATGLLVYPQAAHLEHFEPRRTRQSATGGGYIARVGRWLRESF"
     gene            complement(2803..3645)
                     /locus_tag="VIQ50_08010"
     CDS             complement(2803..3645)
                     /locus_tag="VIQ50_08010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009737201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HEY9360361.1"
                     /translation="MARIMDRWSSLLESKWPRGAGVAASVLVVLASAGYGAVKGDHIP
                     GIMAGLKDARDAVANAAGLRVTSVALAGNHHVSREEVLAAADITGATALVFLDVDEVR
                     QRLKGHPWIADATVLKLYPGELQIGIKEREPFALWQKDGRVSVIAEDGTVLEPYVEPR
                     LVRLPLVVGRGAQTKAKEFLALLDRYPAMRDFVHACVLVGERRWNLRLKNGIDVRLPE
                     SDIAPALERLVALDRAKNLITRDIVAIDLRLADRVTLRLSEAAAQARLEALKDKVKKK
                     GGDA"
     gene            complement(3735..4655)
                     /locus_tag="VIQ50_08015"
     CDS             complement(3735..4655)
                     /locus_tag="VIQ50_08015"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEY9360362.1"
                     /translation="MGKHVAVLMGGWSAEREISLRSGKACAEALARLGHEVTRIDVGR
                     DIATVLTTVKPDLALNMLHGRPGEDGTLQGVLEILAIPYSHSGVMASAVAMQKDLAKA
                     LFRAAEVPVPEGLVASRFEAAKAHLLPRPYVIKPIAEGSSVGVFIVREDHAHPPQELT
                     RDDWHYGERVLVEKYISGKELTCAVMGDAALGVIEIVPMVSFYDYEAKYAPGGSKHLL
                     PAPVSSFVYQQVRRLSLAAHRALGCRGVSRADFRYDDRIAGTGGLVCLEVNTQPGMTE
                     TSLVPELAAHAGITFDELVQWMVEDASLNR"
     gene            complement(4763..>4946)
                     /locus_tag="VIQ50_08020"
     CDS             complement(4763..>4946)
                     /locus_tag="VIQ50_08020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="UDP-N-acetylenolpyruvoylglucosamine reductase"
                     /protein_id="HEY9360363.1"
                     /translation="GCRGLKVGDAQVSQMHCNFLINLGSATAADIETLGETVRRRVKE
                     HAGIDLEWEIKRIGVA"
BASE COUNT          812 a         1696 c         1596 g          842 t
ORIGIN      
        1 gatgatcgac atccccctca ccgcgtttgg cccgcagttc ggcctgcgcc ggacgcggca
       61 actcgtcgat gcccggcatg cggcgcggcc gattgaccgt gcgctccggc gccggcggga
      121 tgaaggcgcg cggggccggc ggcggatccg atggcagcgc catctgttcg gggaacagcg
      181 acggcttggg cgggatcggc cggatggtca cgtcctcgat catcggcagg accgcggctg
      241 caaccgccgc cttggcggct gcttcgatcg attccgccga cgacatcgcc ggcgctgcca
      301 cgctgggcgt tgcgagcggg cgcgtctcga tgcgctcggt cgtcacgcgc tgcacatcgc
      361 cgcgcagctc ttcggcccgc agcttctgcg tgagctcggc aatgcgcact tcgggctcgg
      421 tcacggatcg ctgcaggccg acatgatcga tgccggtggc gacgacagag acgcggatca
      481 ctccctccag actttcgtcg aaggtcgcgc ctacgatgat gttggcgtcc tgatccacct
      541 cttcgcggat gcgggtggcc gcctcgtcga cctcgtagag cgtaaggtcc ttgccgccgg
      601 tgatcgatat gagcaggccc ttggcccctt tcatcgaggc gtcgtcgatc agcggattgg
      661 agattgcagc ctcggcggcc gagagcgcgc gcttctcgcc cgaggcttcc ccggtgccca
      721 tcatggcctt gcccatttca cgcatgaccg cgcggacgtc ggcgaaatcc aggttgatca
      781 agccctcctt caccatcaga tcggtgatgc aggcaacgcc cgaatagagc acctggtcgg
      841 ccatggcgaa ggcgtcggca aaagtcgtct tctcgttcgc cacccggaag aggttttggt
      901 tggggatgat gagcagcgtg tcgacgacct tctgcagctc gacgatgccc tgctcggcca
      961 cgcgcattct gcgtatgccc tcgaagtgga acggcttggt aatgacgccg accgtaagga
     1021 tgccggcctc tttcgcgcag cgtgccacga ccggcgccgc gccggtgccg gtaccaccgc
     1081 ccatacccgc ggtgacgaac accatgtgtg cgccctggag gtggtcgcgg atctcgtcga
     1141 tcgcctcctc cgccgcggcc cggccgactt ccggctgaga gccggcgccg agcccttcag
     1201 taaccgccac ccccatttgg atgatgcgct cggcctttga catcgtgagg gcctgcgcgt
     1261 cggtgttggc gacgacgaag tcgaccccct gcagcccgct cgtgatcatg ttgttgacgg
     1321 cgttgccgcc ggcaccgccg gtcccgaaca cggtgatccg tggcttgagc tcacggacgt
     1381 cgggaatctt cagattgatg ctcatgtttg cctcttggta agcggacgtc tccgccgccg
     1441 ggtcgggccg gtccgccgcc ggccaatggg aaggtggatc gagtcatcag aagctctcgc
     1501 gaagccatcg tccgacccgc gcgatatagc cgcctcctgt cgccgattgc cgcgttcgcc
     1561 gcggttcgaa atgttcaaga tgcgccgcct gcggatacac cagcagtccc gtcgcgacgg
     1621 caaacgcccc tcccctcgcc tcctccggca gtccggcaat gtcgagcggg cgccccactc
     1681 gtaccggacg gcgcaagatt tgcgtggcaa gatcggcaac gccggtgagc tggctcgctc
     1741 cgccggtcag caccacgcgc ccgcgcggct cggccgcgaa cggcgaggcg gccaggcgat
     1801 cgcgcaccat ttccaggatt tcctcgacgc gcggcttgat gatgcgcgcg aggctcgcac
     1861 gcgaaacgaa atgcggcgcc tcacgttcgt ccttgtcgac cggagggacc gcgatcatgt
     1921 cgcgttcgtc cgaaccgccg gtcagcacgc tgccgtacag cgtcttgatg cgctcggcat
     1981 cggcgatgcg agcattgaga ccgcgggcga tatccattgt cacgtgtcgg ccgcccagcg
     2041 cgaacccgtc ggcatgcacg aagcgggcgc cgcaaaagac cgcaagcgtg gtcgtaccgg
     2101 cacccatgtc gaccaaagca gcaccgagtt cggcttcatc gtcggcaaga gcggaaaggc
     2161 cggcggcata tggactggtc accatcgcct cgaccgcaag gtgactgcgc tcgatcgcca
     2221 gcatgagatt gcgcgctgcc gaagcgtccg cggtgaccac gtgcatgtcg atgccgaact
     2281 cgcgcgcaag catcccgcgc gggtcctgca ccccgcgggc ctgatccagc acgtagccga
     2341 tcggcagcga atgcagcacg gcccgcccgg ggcgggcaga gtgccggctc ccggcggcca
     2401 gcacgcgggc aatgtcgccc tcgccgatcg ccgagccgac gacctcgatc gaggccgaga
     2461 tctgttcgct tgcggggcgg ccggcggaaa tcgagacgac gaccgagtcg agctgcattc
     2521 ttgccgagcg ctcggcgaga tcggcgcatt gccgtaccgc cgcttcggct tcggcaagat
     2581 cgattaccgt gcccgccttc atcccgcggg cgagcgtgtg gccgaatccc acgacctcga
     2641 ccgagtggct gcgcagcggc gatccatctt gcggcgggtg cgggcgcagc cgtccgatta
     2701 ggcaggcgat cttgctggtg ccgatgtcga gcgcggcgac cagcaccgag cgattgcccg
     2761 gcagcggctt catcttcgga gtgagggcga agtgaaggcc gctcatgcgt cgccgccctt
     2821 ctttttcacc ttgtctttga gcgcctcgag gcgagcctgc gcggccgctt ccgaaagccg
     2881 caacgtcacg cggtcggcga gcctgagatc gatcgcgacg atgtcccgtg tgatcaggtt
     2941 ctttgcgcgg tcgagcgcga ccaatcgctc cagcgcgggc gcaatgtcgg attccggcag
     3001 ccgcacgtcg atgccgttct tgagacgcag gttccagcgc cgttcgccca ccaacacgca
     3061 cgcgtgcacg aaatcgcgca tcgcaggata ccgatcgagc agagcgagga actccttggc
     3121 cttcgtctgc gcgccacggc cgacgacgag cggaagccgg accaggcgcg gctcaacgta
     3181 gggctcgagc acggtgccgt cctcggcgat gaccgaaacg cgcccgtcct tttgccaaag
     3241 tgcaaacggc tcgcgttcct tgatgccgat ctgcagctcg ccgggataaa gcttgagcac
     3301 cgtggcatcc gcgatccacg gatggccctt gaggcgctgg cgtacctcat cgacgtcaag
     3361 aaatacgagc gcggtggcgc cagtgatgtc cgcggccgcc agcacttcct ctcggctgac
     3421 gtgatgattg ccggcgagcg cgaccgacgt gacccgcaag cccgctgcgt tggcgaccgc
     3481 atcgcgcgcg tccttgaggc cagccatgat gcccgggatg tgatcgcctt tgacggcgcc
     3541 gtagccggcg ctcgcgagaa cgacgagcac gctggcggcg acgcctgcgc cgcgcggcca
     3601 cttgctctcg agcaaggaag accagcggtc catgatgcgg gccacgcgcg atttcggtcg
     3661 cgctgttttc gtgtccgcga cgccgcgcgc agcggcacca gcaggcagcc gcagtcgcaa
     3721 tgtcgcgatc cactttagcg gttgagcgag gcgtcctcga ccatccattg caccagctcg
     3781 tcgaacgtga tgcccgcatg cgcggcgagt tcgggcacga gcgacgtttc ggtcatcccg
     3841 ggctgggtat tgacttcgag acacacaagt ccccccgtcc ccgcgatgcg atcgtcgtag
     3901 cggaaatccg cacggctcac gccccggcag cccagcgcgc gatgcgccgc cagtgatagt
     3961 cttcggactt gttggtaaac aaacgatgaa acaggggcgg gcagcagatg cttggagcct
     4021 ccgggagcgt atttcgcctc gtaatcgtaa aagcttacca tcggcacgat ttcgatgacc
     4081 ccgagcgccg cgtcgcccat gacggcgcag gtcaactcct tgccggaaat atacttttcg
     4141 accagcaccc gctcgccata atgccaatcg tcgcgcgtga gctcctgcgg cggatgcgcg
     4201 tgatcctcgc gtacgatgaa aacgccgacg ctcgagccct cggcaatggg cttgatgacg
     4261 tagggccgcg gcagcaggtg agccttggcc gcctcgaagc gcgatgccac caatccctca
     4321 ggaaccggca cctcggcggc gcggaagagg gccttggcga ggtccttctg catcgccacc
     4381 gccgacgcca tcacgccgga atggctgtag gggatggcga gaatctcgag cacgccttgt
     4441 agggtgccgt cctcgcccgg acgcccgtgc agcatgttga gcgcgaggtc cggcttgacc
     4501 gtggtcagca ccgtggcgat gtcacgaccg acgtcgatac gggtcacttc atgcccgagc
     4561 cgcgccagcg cctccgcgca ggccttgccg gagcgcaagg atatctcgcg ctcggccgac
     4621 cagcctccca tcaaaacagc aacgtgcttg cccatcgttc cccgcccgcg gcgctgattc
     4681 gcttcttcca ctcaaagaac cgaggggctg ggccgggatc acagatcccg ctcgctgccg
     4741 cagccggcgc agcaaaacgc cgctatgcca ctccgatccg cttgatctcc cactcgagat
     4801 cgatgccggc atgctccttg acgcgccggc gcactgtctc gcccagcgtt tcgatatcgg
     4861 cagcggtggc gctgccgaga ttgatgagaa aattgcagtg catctgcgac acctgcgcgt
     4921 cgcccacctt caggccgcgg cagccc
//
LOCUS       DATCWM010000413         4308 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_283826, whole genome shotgun sequence.
ACCESSION   DATCWM010000413 DATCWM010000000
VERSION     DATCWM010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4308
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_283826"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..651)
                     /locus_tag="VIQ50_08025"
     CDS             complement(<1..651)
                     /locus_tag="VIQ50_08025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitase family protein"
                     /protein_id="HEY9360364.1"
                     /translation="MNAPATLFDKLWATHEIARREDGEALLWVDRHYVHEGSFNAFSQ
                     LKARGARVAEPGLTFGVADHYVPTRGSRRHIDNPDIARMVRTLEENTAEHRIALFGLE
                     DPRQGIVHVVGPEQGLTLPGLLIVCGDSHTSTHGALGAYAFGVGASEVAHVLMTQTLW
                     QRKPKRMRITVDGTLASGVAAKDIALAIIARIGADGATGHAIEFAGSAIRALSMEGR"
     gene            754..1992
                     /locus_tag="VIQ50_08030"
     CDS             754..1992
                     /locus_tag="VIQ50_08030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9360365.1"
                     /translation="MSHRSAQLTRRRLLQTTATGAAVAAAGLVDAPALLRAQGAAVKL
                     GVLHPVSGALSYSGQQGRLGATLAIEDVNAAGGIKALGGAKIDAVLGDAQSTPEGGNA
                     EVEKMNSAGVAAIVGGYASSICLTASQTAARYDLPYLVDVGVADNIVTRGLKNTFRFG
                     PGFGVIAKTALDNLVTINEAAGKPAKTVMIVHEDSLFGSGLAKLLNTQLPERGFQVLD
                     TIPHPTPTRDFNNVVLKIKAQNPDLVIPANYYNEYVLLARTMQQQRVRQKGIYSVLGG
                     AASSYKFVKEFPEAAQFIMDCNHWFDPRNPKALALKKTVEEKGQFYTYEVFMNYSCVL
                     LLADALERAASADRAKLTAALESSTFSGHLMPYGPTKFFNGQNQGAAPVNTQVLGNDI
                     QVIFPQTFATAKPVFPMPPA"
     gene            2037..2909
                     /locus_tag="VIQ50_08035"
     CDS             2037..2909
                     /locus_tag="VIQ50_08035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9360366.1"
                     /translation="MLSPIILVPAILNGLLTGAVYGLVALGLTLIYGVLHIINFAHGA
                     LLTAAMFAAFFAHRLLGLDPYLAALGLTPLFFALGYCLQRFVIGPAAHGEDRNILLVT
                     LALAVVIENALLYAFGGDTRTLNLAYAFDVVDIGIAFLALPRVMGFAVVLAVALTLWL
                     ILALTDTGKAIRAVAKEKLGAELSGIDVAHIYAVTFGLGTACLAIAACLLIPTYYVNP
                     HIGNAFVLVAFTIVVLGGMGSVTGALIGGLFVGVVESLCGLYLGESLGQIGIFVMFIL
                     VLLLRPAGLFGERA"
     gene            2906..3895
                     /locus_tag="VIQ50_08040"
     CDS             2906..3895
                     /locus_tag="VIQ50_08040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9360367.1"
                     /translation="MKRASLAHIAVVIAVLATVPLLTASNVVLNFLVVALLIALVGQG
                     WNVLGGYGGQYSFGHAAFFGTGAYVSAILQTRYGVNAWLAFGLGIAGGALIGAAIGAL
                     TFRSGLRGSYFALVTLAFAEVLRILASVAPITGAGVGILITLDLRPQAFQFQSRAPFY
                     WIILALLAASFVIVRLIEQSRFGAWLVAVRENEEAAKAVGVNTQRVKLAAMTISAAIT
                     AAGGAFYAQYFLFIDSGIAYGPWISIEALLAPIVGGIGSAFGPLLGALLVKTLGELTK
                     LVTGDAPGLDLVIYGGVLILIVAFTPQGISGLIADLRLRFARARPRLPERAHG"
     gene            3888..>4308
                     /locus_tag="VIQ50_08045"
     CDS             3888..>4308
                     /locus_tag="VIQ50_08045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008139178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY9360368.1"
                     /translation="MAEPLLRLERVCKRFDGLLAVDNASFAVETGRITALIGPNGAGK
                     TTLFSIISGFLTPSEGRIFHRGAEITGMPAHLLARRGIVRTFQVAQPFAGLTVHENIA
                     IGAHLSRRARADALAAAAEVASAVGLGDLLGRPAASLT"
BASE COUNT          642 a         1484 c         1375 g          807 t
ORIGIN      
        1 ccgtccctcc atggacaggg cgcggatggc ggagccggcg aattcaatgg cgtggcccgt
       61 cgcgccgtcg gcgccgatgc gcgcgatgat ggcaagcgcg atgtccttgg cggcaacgcc
      121 ggaagcgagc gtgccgtcga cggtgatgcg catgcgcttc ggcttacgct gccacagcgt
      181 ctgcgtcatc agcacgtgcg cgacctcgga ggcgccgacg ccaaaggcgt aggcgccgag
      241 cgcgccatgg gtcgaggtgt ggctgtcgcc gcacacgatc agcaagccgg gcagcgtgag
      301 gccttgctcg ggcccgacca cgtgcacgat tccttggcgc gggtcttcga ggccgaacag
      361 cgcgatgcga tgctcggcgg tgttctcctc gagcgtgcgc accatgcgcg cgatgtcggg
      421 attgtcgatg tggcgccgcg agccgcgcgt cggcacgtag tgatcggcga cgccgaaggt
      481 caagcctggc tcggccacgc gcgcgccgcg cgccttgagc tgactgaagg cgttgaacga
      541 tccctcatgc acgtaatggc ggtcgaccca cagcagcgcc tcgccgtcct cgcgccgcgc
      601 gatctcgtgg gtcgcccaca gcttgtcgaa cagggtcgca ggcgcgttca tgcgcatcga
      661 gaggattaaa cgccgcggcg cgcgaaacgc aatatggaag gcccggtcgg tcgatgttag
      721 gctatcgagc ggatctcgga ttggagggtt gcaatgtcgc atcggtcagc acagctcacg
      781 cgccgccgtc tgctgcaaac gacggcgacg ggcgccgcgg ttgcggccgc cggcctggtc
      841 gatgcaccgg cgctccttcg cgcgcagggc gctgcggtca agctcggcgt gctgcatccg
      901 gtctccggcg cgctctccta ttcgggccag cagggccgcc tcggtgcgac gctcgcgatc
      961 gaggacgtga atgcggccgg cggcatcaag gcgctgggcg gcgccaagat cgacgcggtg
     1021 ctcggcgacg cgcagtcgac gccggagggc ggcaatgccg aggtcgagaa gatgaattca
     1081 gcgggagtgg cggcgatcgt cggcggctat gccagctcga tctgcctcac cgccagccag
     1141 accgccgcac gctacgatct gccctatctg gtggacgtcg gcgtcgccga caacatcgtc
     1201 acgcgcggcc tcaagaacac gttccggttc gggcccggct tcggcgtgat cgcgaagacc
     1261 gcgctcgaca acctcgtcac catcaatgag gcggccggca agccggcgaa aaccgtgatg
     1321 atcgtgcacg aggactccct gttcggatcg gggctcgcca agcttctcaa tacgcaactg
     1381 ccggagcgcg gctttcaagt gctcgacacc atcccgcatc ccacgccgac ccgcgatttc
     1441 aacaacgtcg tgctcaagat caaggcgcaa aatccggacc tcgtgatccc ggcaaattat
     1501 tacaatgaat acgtgctgct cgcccgcacc atgcagcaac agcgcgtgcg gcagaaaggc
     1561 atctactcgg tgctcggcgg cgcggcatcc tcttacaagt tcgtcaagga attccccgaa
     1621 gccgcgcaat tcatcatgga ctgcaatcat tggtttgatc cgcgcaatcc caaggcactg
     1681 gcgctgaaga agaccgtcga ggagaagggc cagttctaca cctacgaagt attcatgaac
     1741 tattcctgcg tccttctcct cgccgatgcg ctcgagcgcg ccgcaagcgc ggaccgcgcc
     1801 aagctcaccg cggcattgga aagctcgaca ttttccggcc acctcatgcc ctacgggccg
     1861 accaagttct tcaacgggca aaatcaaggg gccgcaccag tcaacaccca ggtgctcggt
     1921 aacgacatcc aggtgatctt cccgcagacg ttcgccacgg cgaagccggt attccccatg
     1981 ccacccgcct gagcggccac aggagggcgg gcgccgccgt cgcctccgcc tcgccgatgc
     2041 tgtcgccgat cattctcgtt cccgccatcc tcaacgggct tttgaccggc gcggtgtatg
     2101 ggctggtcgc gctcgggttg acgctgatct acggcgtcct gcacatcatc aatttcgcgc
     2161 atggcgcgct gctcaccgcc gccatgttcg cggcgttctt cgcccaccgg ctgctcgggc
     2221 tcgatcccta cctcgcggcg ctcgggctca cgccgctgtt ctttgcgctc ggttattgcc
     2281 tgcagcgctt cgtcatcggc cccgcggctc acggcgagga ccgcaacatt ctgctggtga
     2341 cgctcgcgct cgccgtggtg atcgaaaacg cgctgcttta cgccttcggc ggcgatacgc
     2401 gcacgctcaa cctcgcctac gccttcgacg tcgtcgacat cggcatcgcg ttcctggcgc
     2461 tgccgcgcgt catgggcttc gccgtcgtgc tggcggtggc gctgacgctc tggctcatcc
     2521 tcgctttgac cgacaccggc aaagcgatcc gtgcggtcgc gaaggagaag ctcggcgccg
     2581 agctctctgg catcgacgtc gcccacatct atgccgtcac ctttgggctc ggcaccgcct
     2641 gcctggccat cgccgcctgc ctgctgatcc cgacgtatta cgtcaatccg cacatcggca
     2701 acgccttcgt ccttgtcgcc ttcaccatcg tcgtgctcgg cggcatgggc tcggtgacgg
     2761 gcgcgctcat cggcggcctg ttcgtcggcg tggtggagag tctctgcggg ctttatctcg
     2821 gggagtcgct cgggcagatc ggcattttcg tcatgttcat cctggtgctg ctgttgcgcc
     2881 cggccggcct attcggagag cgggcatgaa gcgggcctct ctcgcgcaca ttgccgtcgt
     2941 catcgccgtg ctcgcgacgg tgccgttgct cacagcttcg aatgtcgtgc tcaattttct
     3001 ggtcgtggcc ttgctgatcg cgctggtagg gcagggctgg aacgtgctcg gcggctacgg
     3061 cgggcagtac tccttcgggc atgcggcctt cttcggcacc ggcgcgtatg tcagcgccat
     3121 cctgcaaacg cgttacggcg tcaatgcttg gctggcattc gggcttggca tcgccggcgg
     3181 cgcactcatc ggcgccgcga tcggcgcgct gaccttccgt tccggattga ggggctcgta
     3241 tttcgccctc gtcactctcg cctttgccga ggtgctgcgc attctcgcca gcgtggcgcc
     3301 catcaccggc gctggcgtcg gtatcctgat cacgctcgac ctgcggccgc aagcgttcca
     3361 attccagagt cgcgcgccgt tctactggat catccttgcg ctgcttgccg cctcgttcgt
     3421 cattgtgcgg ctgatcgagc agagccggtt cggcgcctgg ctcgtcgccg tgcgcgaaaa
     3481 cgaggaggcc gccaaagcgg tcggtgtcaa cacgcagcgg gtcaagctcg cggccatgac
     3541 gatttccgcc gccatcaccg ccgccggcgg agctttctac gcgcagtatt tcctcttcat
     3601 cgattccggg atcgcttatg ggccgtggat ttccatcgag gctctgctcg ctcccatcgt
     3661 cggtgggatc ggctccgcgt tcggcccgct gctcggtgcg ctgctggtca agacgctcgg
     3721 ggaattgacc aagctcgtca ccggcgacgc gcccggcctc gacctcgtca tctacggcgg
     3781 cgtgctgatc ctgatcgtag cgttcacgcc gcaagggatc tcggggctca tcgccgacct
     3841 gcgcctgcgt tttgcgcggg cgcggccgcg cctgccggag cgcgcccatg gctgagccgt
     3901 tgctccgcct cgagcgcgta tgcaaacgct tcgacggtct gctcgccgtg gacaacgctt
     3961 cgttcgccgt cgagaccggc cggatcaccg cgctcatcgg ccccaacggt gccggcaaga
     4021 ccaccttatt ctccatcatc agcggattcc tgacgcccag cgaggggcgt atcttccacc
     4081 gcggcgccga gatcaccggc atgcctgcgc atcttctcgc gcggcgaggc atcgtgcgca
     4141 cgttccaggt cgcgcagccg ttcgccgggc tgaccgtgca cgagaacatc gccatcggtg
     4201 cgcatctgtc gcgccgcgcg cgtgccgacg cgctcgcggc cgccgcggag gttgcaagcg
     4261 cggtcgggct cggcgatctc ctcggccgtc ccgccgcgag cctcaccg
//
LOCUS       DATCWM010000414         2525 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_332419, whole genome shotgun sequence.
ACCESSION   DATCWM010000414 DATCWM010000000
VERSION     DATCWM010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2525
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_332419"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..861)
                     /locus_tag="VIQ50_08050"
     CDS             complement(<1..861)
                     /locus_tag="VIQ50_08050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEY9360369.1"
                     /translation="MADLALKHAISPRSIPDVGAWDRLKVNHNWLALWFMLPAAAFLL
                     LFLAYPLVLGVWLSFTDARIGRGGEFVGLENYEWLWDDSVFWLSVFNTLLYTGVATAF
                     KFAIGLYLALLLNHNMPFKAMIRAVVLIPFIVPTVLSAIAFWWIFDSQFSIVSWSLRK
                     LGLIATNIDFLGDTWNARWSVIFANIWRGVPFVAITLLAGLQTVSPSLYEAATIDGAT
                     PWQRFRYVTYPLLTPIIAVVMTFSVLFTFTDFQLIWVLTRGGPANATHLMATLSYQRA
                     IGGGYLGEGSA"
     gene            complement(1001..2314)
                     /locus_tag="VIQ50_08055"
     CDS             complement(1001..2314)
                     /locus_tag="VIQ50_08055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020091915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEY9360370.1"
                     /translation="MTTLNRRTLVQGALATTGALAGPSLLEWASAWAQTAPWKPEKGA
                     QLALLRWKYFVQSEDDEFVALLDAFTKATGVKVTVTRESFEDIPPKASVAANTNAGPD
                     LFWGLYSLPHLFPQKCVDVTDVADYFGKKYGGWVQSAVTYGKSGNKWIDIPLCFNGNM
                     LNYRVSALKKAGFSKFPATTDEFLEYAKATKRNNTPGGMALGHATGDGNAWVYWCLWA
                     HGGNLVDKNDKVILNSPETVKALEYAKQLYDNMIPGVAAWNDAFNNKAFLAGEISWTN
                     NGISIYAAAKRDPTKKEIAEDMDHAVWPVGPIGRPTEFHVCFPMLAMTYTKYPQACKA
                     LMAYLLEADQYNKWLEASVGYLTHPLNAYDKNPVWTSDPKNTIFGEAAKRTLTAGGLG
                     SVGEKAVAALADFIILDMFANICTGREDAKGAIKIAERQAMRLYR"
     gene            complement(2331..>2525)
                     /locus_tag="VIQ50_08060"
     CDS             complement(2331..>2525)
                     /locus_tag="VIQ50_08060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TOBE domain-containing protein"
                     /protein_id="HEY9360371.1"
                     /translation="TEAEVLVVEPTGSELQIAAKLGGEEIVAVFRERHDFKPGDKIRL
                     SADPRVAHLFDAPSGERLTV"
BASE COUNT          475 a          762 c          795 g          493 t
ORIGIN      
        1 ggcggagcct tctccgaggt agcccccgcc gatggcgcgc tgatagctga gcgtcgccat
       61 cagatgtgtg gcattggccg gcccgccgcg cgtgagaacc cagatgagct ggaaatcggt
      121 gaaggtgaac agcaccgaga acgtcatcac cacggcgatg atgggagtga gcagtggata
      181 agtgacgtag cgaaatctct gccaaggcgt cgctccgtcg atggtggcgg cctcgtagag
      241 cgaaggcgac acggtctgca ggccggccag cagcgtgatc gcgacgaacg gcacgccgcg
      301 ccagatgttg gcgaatatga cggaccagcg cgcgttccag gtgtcgccga gaaaatcgat
      361 attggtcgcg atcagcccga gcttgcgtag cgaccaggac acgatcgaga actgactgtc
      421 gaagatccac cagaacgcga tcgcggaaag caccgtcggc acgatgaacg gaatcagcac
      481 gacagcgcgg atcatcgcct tgaacggcat gttgtggttg agcagcagcg cgagatagag
      541 gccgatcgcg aatttgaacg cggtggcgac cccggtatag aggagcgtat tgaacaccga
      601 gagccagaac accgaatcgt cccacagcca ttcgtagttc tcgaggccga cgaactctcc
      661 gccgcggccg atacgcgcgt cggtgaacga gagccagacg ccgagcacga gggggtaggc
      721 gagaaacagc aacaaaaacg ccgccgctgg cagcatgaac cacagcgcga gccagttgtg
      781 gttcaccttg agccgatccc acgcgccgac gtcgggtatc gaccgcgggg agatcgcgtg
      841 cttgagggca agatcggcca tcaattaccc atcgatggtt tcaatcactg ctgcgtcgtg
      901 cccggcacgc gggcaagctt gcgcaggctg cataccgttg cgcacctgca ttcttaatcg
      961 ccgtttcccg ttctctgatc accactgttc ctgctgcctg tcatcggtac agccgcatcg
     1021 cctggcgctc ggcgatcttg atcgcgccct tggcgtcctc gcgcccggtg cagatgttgg
     1081 cgaacatgtc gaggatgatg aaatcggcaa gcgccgcgac cgccttctcg cccaccgagc
     1141 caagcccgcc cgcggtgagc gtgcgcttgg ccgcctcacc gaagatcgtg ttcttgggat
     1201 cggacgtcca gaccgggttt ttgtcatagg cattgagggg gtgggtcaga tacccgactg
     1261 aggcctccaa ccacttgttg tattgatcag cttccagcag gtaggccatc agcgccttac
     1321 aggcctgtgg atatttcgtg tatgtcatcg ctagcatcgg gaagcagaca tggaactcgg
     1381 tcggcctgcc gatcggcccg accggccaca ccgcgtgatc catgtcctcg gcgatctcct
     1441 tcttggtggg atcgcgcttg gccgcggcgt agatcgagat gccgttattg gtccacgaaa
     1501 tttcgccggc aagaaatgcc ttgttgttga aggcatcgtt ccacgccgcc acgcccggga
     1561 tcatgttgtc gtagagctgc ttggcgtatt cgagcgcttt gacggtttcc ggcgagttga
     1621 ggatcacctt atcgttcttg tcgacgagat tgccgccgtg cgcccacagg caccaataca
     1681 cccaggcatt gccgtcgccg gtggcatggc cgagcgccat gccgcccggc gtgttattgc
     1741 gcttggtcgc cttggcgtat tccaggaact cgtccgtggt cgccggaaat ttcgagaagc
     1801 ccgccttctt caacgccgaa acgcggtaat tcaacatgtt gccgttgaag cagaggggaa
     1861 tgtcgatcca cttgtttccg ctcttgccgt aggtcacggc actctgcacc caaccaccgt
     1921 atttcttgcc gaaatagtcg gcgacgtcgg tcacgtcgac gcatttctgc gggaacagat
     1981 gcggcagcga gtacagaccc cagaacaagt ccggcccggc gttggtattc gctgctaccg
     2041 aggccttggg cgggatgtcc tcgaaggatt cgcgcgtgac ggtgaccttg acgcccgttg
     2101 ctttggtgaa ggcgtcaagc agcgccacga attcatcgtc ctcggattgc acgaagtatt
     2161 tccagcgcag cagcgccagt tgcgcgccct tctcgggttt ccacggggcc gtttgcgccc
     2221 aggcgctcgc ccattcgagc agggacgggc cggcgagggc gccggttgtg gccagggcgc
     2281 cttgcaccag ggttcgccgg ttcaacgttg tcatgatggt tcctccctta tcagacggtg
     2341 agacgttctc cgctcggcgc gtcgaacagg tgcgccacgc gcgggtcggc gctgagccgg
     2401 atcttgtcgc ccggcttgaa atcatggcgt tcgcggaaga cggcgacaat ctcctcgccg
     2461 ccgagcttgg cggcgatctg tagttcggag ccggtcggct cgacgacaag cacctcggct
     2521 tcggt
//
LOCUS       DATCWM010000415         2630 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_375699, whole genome shotgun sequence.
ACCESSION   DATCWM010000415 DATCWM010000000
VERSION     DATCWM010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2630
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_375699"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(147..596)
                     /locus_tag="VIQ50_08065"
     CDS             complement(147..596)
                     /locus_tag="VIQ50_08065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018181412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20 family protein"
                     /protein_id="HEY9360372.1"
                     /translation="MRTFDLAPLYRSTVGFDRLFSMLDGFEAAPGYPPYNIERTGENA
                     YRITVAVAGFGENELSIEAKENTLTIKGEKQTKDEKNGDEVLYQGIAARAFERVFQLA
                     DYVQVKGASLKNGLLHVDLVREIPEAKKPRQIPIGNGQTKVVEAKAA"
     gene            864..1805
                     /locus_tag="VIQ50_08070"
     CDS             864..1805
                     /locus_tag="VIQ50_08070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011090464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY9360373.1"
                     /translation="MTLVSIPANPVPDDVVAGTFKTPDGVSLRFVRWAPPRGRKGTVC
                     LFQGRSEFIEKYFETARDLRARGFAVATFDWRGQGMSERALGNSRKGHVRNFAQYQID
                     LESFINEIVLPDCPPPLFALGQSMGATILLHAAYAGHRWFDRMVLLAPMVALPGRSGG
                     SRILVKAMRAIGLGSLYVPGGSAATIMQRPFKDNLLTSDPVRYARNVAVLEAEPALAV
                     GSPTVSWCDAAFRAMSELSDAAYPGKIRQPILIIAAGMDAIVSTQAIGEFAVRLRAGS
                     HLMVPGARHELLMEQDRFRIQALAAFDAFVPGTPLFK"
     gene            complement(1861..>2630)
                     /gene="hisN"
                     /locus_tag="VIQ50_08075"
     CDS             complement(1861..>2630)
                     /gene="hisN"
                     /locus_tag="VIQ50_08075"
                     /EC_number="3.1.3.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004401 - histidinol-phosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="histidinol-phosphatase"
                     /protein_id="HEY9360374.1"
                     /translation="SAFVDELASVSGETILPFFRTALSIEDKGRAGGFDPVTAADHAA
                     ETAMRSLIRRTFPDHGIIGEEFGKERADAEYVWVLDPIDGTKSFICGMPAWGTLIALL
                     RSGEPVYGLMNQPFTRERFSGDGGGAHYRGPNGKRDLRVRACADLASAVLFTTSPLLM
                     NARDRETFAQVEKAVRLSRYGGDCYAYCMLAAGHVDLVIETELKPYDVLPLVPIIIGA
                     GGIITSWEGGAPHAGGRIIAAGDRRVHAAAVEMLGKQ"
BASE COUNT          422 a          866 c          853 g          489 t
ORIGIN      
        1 agcaaggcgc cgcgcaaacc acaggtacgg tgactgcgcc tgccgatgcg gccgcgcccc
       61 cgcccgccgg cccttacgac tacgaatgac gccataaatg aaagcgcccc ggaaaccggg
      121 gcgctccctt cgatcgaacc gaccgcttac gcagccttgg cttcgaccac cttggtctgg
      181 ccgttgccga tcgggatctg gcgcggcttc ttcgcctcgg gaatctcacg cacgagatcg
      241 acgtgcagga gtccgttctt gaggctcgcg cccttgacct ggacatagtc ggcgagctgg
      301 aagacgcgct cgaacgcgcg cgccgcgatg ccctgataga gcacctcgtc gccgttcttc
      361 tcgtccttgg tctgtttctc gcctttgatc gtcagcgtgt tttccttcgc ttcgatcgag
      421 agttcgttct cgccgaagcc ggccaccgcc accgtgatcc gataggcgtt ctcgccggtc
      481 cgctcgatgt tgtagggcgg atagcccgga gcggcctcga agccgtccag catcgagaaa
      541 agccggtcga aaccgacggt cgaacgatac aggggagcaa gatcgaaagt tcgcatggca
      601 taacctcgtt gttgagcgaa atgcagatgg tccgcccaag tgggccgaac cggtttgctt
      661 ttgcgcagcc cgaagaggcc tgcgcgtact ggatatgggg gcctatcctg cccggcgcaa
      721 gggcgctaac cgtctgggtc catgatggtt ttcctaaaat tcccgcaatc ccggccggtc
      781 gtccgccgcc cccggccccg cgcggattga ggcgaggcgc cgccctgcta taaggcgtgc
      841 gcgcgagcgc cccgcagagg ttcatgaccc tcgtctccat tcccgccaat ccggttcccg
      901 acgacgtcgt cgccggcacc ttcaagacgc ccgatggggt ctcgctgcgc ttcgtgcgct
      961 gggcgccgcc gcgcggccgc aagggcacgg tgtgcctgtt tcaggggcgc tcggaattca
     1021 tcgagaaata cttcgagacc gcgcgcgacc tgcgcgcccg cggcttcgcg gtggccacct
     1081 tcgattggcg cggccaaggc atgtcggagc gggcgctcgg caactcgcgc aagggtcacg
     1141 tgcgcaattt cgcccaatac cagatcgatc tcgagagttt catcaacgag atcgttctcc
     1201 cggactgccc gccgccgttg tttgcgctcg gccagtccat gggcgcaacg attttgctgc
     1261 acgcggctta cgccgggcat cgttggttcg atcgcatggt gctgctggcg ccgatggtcg
     1321 cgctgccggg acgctccggc ggaagccgca tcttggtgaa ggcgatgcgc gcgatcgggc
     1381 tcggctcgct ctacgtgccg ggcgggagcg cggcgacgat catgcagcgt cctttcaagg
     1441 acaacctgct cacgtccgat ccggtgcgct acgcccgtaa tgtcgcggtg ctcgaggcgg
     1501 agccggcgct ggcggtcggt tcgccgacgg tttcctggtg cgacgccgcg tttcgcgcca
     1561 tgtccgagct ctcggatgcc gcttacccgg gaaagatccg ccaaccgatc ctgatcatcg
     1621 ccgcgggcat ggacgcgatc gtatcgactc aagccatcgg cgagttcgcg gtgcggctgc
     1681 gcgcgggctc gcatctcatg gtgccgggtg cgcggcacga gttgctgatg gagcaggatc
     1741 gctttcgcat ccaggcgtta gccgcattcg acgcgttcgt gcctggcacg ccactgttca
     1801 agtgacggca atgcgagcct cttagaacgc gcttaagtcg cggcatggtc cctttgtgga
     1861 ctattgttta ccgagcatct cgaccgccgc ggcgtgcacg cgcctgtcgc ccgccgcgat
     1921 gatgcgtccg cccgcgtgcg gggcgccgcc ttcccagctg gtaatgatgc cgccggcgcc
     1981 gatgatgatc ggcaccagcg ggagcacgtc gtaaggcttg agctccgttt cgatcaccag
     2041 atcgacatgg cccgccgcca gcatgcaata ggcgtagcag tcgccgccgt agcgcgacag
     2101 ccgtacggcc ttttccacct gggcgaaagt ttcgcgatcg cgtgcattca tcagcagcgg
     2161 gctggtcgtg aacaaaaccg cgctggcgag atcggcgcag gcgcgtacgc gcaagtcccg
     2221 cttaccattg ggaccgcggt aatgcgctcc cccgccgtcg ccgctgaagc gctcgcgggt
     2281 gaagggctga ttcatcaagc cgtagaccgg ctcgcccgat cgcagcaagg cgatcagcgt
     2341 tccccaggcg ggcatgccgc agatgaagga tttggtccca tcgatggggt cgaggaccca
     2401 gacgtattcc gcgtcggcgc gttccttgcc gaattcctcg ccgatgatgc cgtggtcggg
     2461 gaaggtacgg cggatgagcg accgcatcgc cgtttcggcc gcgtggtcgg cggcggtgac
     2521 gggatcaaat ccgcccgcgc ggcctttgtc ctcgatgctc agcgccgtgc ggaaaaacgg
     2581 caggattgtc tcgcccgaga ccgaggcaag ctcgtcgacg aaagccgaaa
//
LOCUS       DATCWM010000416         3253 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_251499, whole genome shotgun sequence.
ACCESSION   DATCWM010000416 DATCWM010000000
VERSION     DATCWM010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3253
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_251499"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..349)
                     /locus_tag="VIQ50_08080"
     CDS             complement(<1..349)
                     /locus_tag="VIQ50_08080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011502053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEY9360375.1"
                     /translation="MQPSPERTLPTAADVDAAARRLSGIALHTPLITSPALDVRTGGR
                     VFLKAETLQRTGSFKFRGAYNKLSSIPQAQRASGVVAFSSGNHAQGVAAAAALLGMPA
                     VIVMPADAPRPKRE"
     gene            503..1282
                     /locus_tag="VIQ50_08085"
     CDS             503..1282
                     /locus_tag="VIQ50_08085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY9360376.1"
                     /translation="MDLGISGRKAIVCASSRGLGRACAFALAQAGCDVVVNGRNDKTV
                     AATAEELRLSTGANVTAVVADVATAEGQAALLGACPEPDILVNNNAGPPFRDFRELTR
                     AQMVDGVIANMVVAIELTQKVIDSMCAKNFGRIVNITSGSVKMPLSGLDLSSGARAGL
                     TGFLAGVARSVAASNVTINFLLPGAFDTERLASNMAMTAKKRGVSIEEARKERMAIVP
                     AKRFGTPAEFGDACAFLCSAQAGYITGQSLLIDGGIYPGVL"
     gene            1376..1549
                     /locus_tag="VIQ50_08090"
     CDS             1376..1549
                     /locus_tag="VIQ50_08090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360377.1"
                     /translation="MAYVELAEKCRQLASAVTDPLHKKQLQNMARSWETVAAERAKRL
                     AKSAKSKRARKSK"
     gene            1993..2844
                     /locus_tag="VIQ50_08095"
     CDS             1993..2844
                     /locus_tag="VIQ50_08095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011005377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEY9360378.1"
                     /translation="MKLVRFGPRGREKPGIIDSKGAIRDLSKVVPDIAGEALSPKGLA
                     KIRKAPIDKLPLVRGNPRLGACVGGIGNLIAIGLNYSDHAAETGSPIPKEPIIFNKVT
                     SCISGPNDDTIIPKDSSKLDWEVELAIIIGQRGRYLSKNKALDVVAGYCLANDVSERV
                     FQIERSGQWIKGKSAESFGPLGPWLVTKDEIRDPQRLSMWLDVNGEKRQRGNTSTMIF
                     DCRHLVWCCSQYFVLEPGDVILTGTPPGVGLGMKPEPKFLKAGDVVTLGIDGLGEQRQ
                     KVVKAKA"
BASE COUNT          633 a         1066 c         1017 g          537 t
ORIGIN      
        1 gctcccgctt cgggcgcggc gcatccgccg gcatgacgat gactgccggc atgccgagta
       61 gcgccgccgc cgccgcgacc ccctgcgcgt gattgcccga ggaaaacgcc accacgccgc
      121 tggcgcgttg cgcctgcggg atggacgaga gcttgttgta ggcgccgcgg aacttgaatg
      181 agcccgtgcg ctgcaaggtc tctgccttga gaaacacgcg cccgccggtg cgcacatcga
      241 gcgcgggcga cgtgatgagc ggcgtgtgca aggcaatgcc cgaaagacgc cgcgcggcgg
      301 catcgacatc ggcggcggtc ggcagcgtgc gttcgggcga gggttgcatg gcaagcgacg
      361 gtagcgccgc ccaggcccac ccggcaaggc cggcagtgac ggcagtttgc ggttcgatgc
      421 ggcggtatct atggacatgg cgcgggggcg aaagtgtaca atcgccatcg tcttcttttc
      481 ccaccagcac tcggatcgac ccatggatct cggaatttcc ggccgcaagg ccattgtgtg
      541 tgcctcgagc cgcggtcttg gccgcgcctg cgcctttgcc ctcgcgcagg ccggttgcga
      601 cgtcgtcgtc aacgggcgca acgacaagac ggtcgcggca acagcggagg aactgcggct
      661 ctcgaccggc gccaatgtga cagcggtcgt ggccgatgtg gcgacggcgg aaggacaggc
      721 ggcgctgctc ggtgcctgcc cagagcccga catcctggtg aacaacaacg ccggcccacc
      781 attccgcgac tttcgcgagc tcacgcgcgc gcagatggtc gacggcgtca tcgccaacat
      841 ggtggtcgcg atcgagctca cgcagaaggt catcgattcg atgtgcgcca agaacttcgg
      901 ccgcatcgtc aacatcacgt cggggtcggt gaaaatgccg ctctccgggc tcgatctctc
      961 ctctggcgcg cgcgccggcc tgaccgggtt tctcgccggg gtggcgcgct cggtcgccgc
     1021 ctccaatgtc accatcaatt tcctcctgcc cggcgcgttc gataccgagc ggctggcctc
     1081 gaacatggca atgaccgcca agaagcgggg cgtctcaatc gaagaggcga gaaaggagcg
     1141 catggcgatc gtgccggcca agcgcttcgg cacgccggcc gagttcggcg acgcctgtgc
     1201 ctttttgtgc tcagcgcagg ccggctatat caccggacaa agcctgctca tcgacggcgg
     1261 gatctatccg ggggtgctgt gaggagcacc ctttcagctc gtcattcccg ccgggccgca
     1321 atagcggcga gagccggaat cccaaacgac gggaggtgca acaatgcgca aaggcatggc
     1381 atacgtcgaa cttgcggaga agtgccggca gctggcgagc gccgtgacag acccgttgca
     1441 caagaagcaa ttgcaaaaca tggcgcgatc gtgggagacg gtcgctgcag agcgggcaaa
     1501 acggcttgcc aaatcggcga agtcaaagcg cgcgcgcaag tcgaagtgac gcttcggtca
     1561 gcgaattcca atgtttccgc gaaacatggg ccccaaacgc gaacgaggcc gactcgcgcc
     1621 ggccccgtcg caccccccat ttaattcagt gatccggcaa agccctgagg aggggacttg
     1681 ccatcatcta ggcgcccgaa cccgcgtcgc ttgcagcttg gcgcgcggac caggtgcatg
     1741 gcgatgatcc tgtgcgcggc agggttcgat tgcaactgaa aatgccccgt aaaggcgcca
     1801 gtttgctcac tatctcagcg cctgttgcct gccagcaaca gagattcgag ctgcggccta
     1861 cctttggaca cactttaccc agccggggag ccatcaccac cgcacaaaac cactttcctt
     1921 gcccctcgcg gagggccgac gcatgatcca actctgcggc gtcaacgaat ccctcagccc
     1981 caaggagact ccatgaagct cgtccgcttc ggcccgcgcg gccgcgaaaa gccgggaatc
     2041 atcgattcca aaggcgctat ccgcgacctc tcgaaagtgg tgccggatat cgccggcgag
     2101 gcgctgtcgc ccaaggggct cgccaagatc cgcaaggcac caatcgataa gctaccgctc
     2161 gttcgcggca atcctcgcct cggcgcctgc gtcggcggca tcggcaatct catcgccatc
     2221 ggcctgaact attccgacca cgccgccgag accggctcgc ccattccgaa agagccgatc
     2281 atcttcaaca aggtgacgtc ctgcatcagc gggcccaacg acgacacgat cattcccaag
     2341 gattcgagca agctcgactg ggaggtcgag ctcgccatca tcatcggcca gcgcgggcgt
     2401 tacttatcga agaataaggc actggacgtg gtcgccggtt attgcctcgc caacgacgtt
     2461 tccgagcgcg tgttccagat cgagcgcagc gggcagtgga tcaaaggcaa gagcgccgaa
     2521 agcttcggcc cactcggccc gtggctggtc accaaggacg agatcaggga cccgcagcgg
     2581 ctgagcatgt ggctcgacgt caacggggaa aagcgccagc gcggcaatac cagcaccatg
     2641 atcttcgact gcaggcatct cgtctggtgc tgctcgcagt acttcgtact cgagcccggc
     2701 gacgtcattc tcacgggcac gccgcccggg gtcgggctcg gcatgaagcc cgagccgaaa
     2761 ttcctcaagg ccggcgacgt ggtcacgctc ggcatcgatg gcttgggcga gcagcggcag
     2821 aaggtggtga aggccaaggc gtagaatcac cgcgactttc agcgcgccct caacgcgcta
     2881 cgcctgattt ttccgtccgg cgagattcga gcgtcaggtt ctggccctcg acctagcccg
     2941 actcattgag tcccttcact ctgactcctg ccaccaccgg taaagcctgc cccacgcaga
     3001 gctacaacgc ggcgatatac aggctctcgt ctacgaacga gcgatcctcg gccacctgat
     3061 caagcaatac ggttggcgcg atctgcaggt tctgcctcac acattggcgg tgcacgacta
     3121 tgcgatcgcg ttgcccacgg acagtccgat caaggaaccg atcaaccgcg cgctgctgaa
     3181 gatcatccat cgggccgatt ggaaagacct agtgcagcgc tccgtcggcg ggaccgatca
     3241 ggtcgccgcg acg
//
LOCUS       DATCWM010000417         6493 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_73446, whole genome shotgun sequence.
ACCESSION   DATCWM010000417 DATCWM010000000
VERSION     DATCWM010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6493)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6493)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6493
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73446"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..730)
                     /locus_tag="VIQ50_08100"
     CDS             complement(<1..730)
                     /locus_tag="VIQ50_08100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY9360379.1"
                     /translation="MAENRPVSEPDIVMVGAGIMSATLAVFLKELEPTLTVEMFETLD
                     GAAEESSDAWNNAGTGHAALCELNYTPERSDGSIDISKALEVNVEFDLSRQLWSYLVT
                     KGAIADPRSFIHPCPHMSLVRGAADVAFLKKRHAALTAHHTYQGMEYTEDKRQIAEWI
                     PLVMEGRAPNETVAVTRMITGADVDYGSLTRHLVGYLQRLPGFAVHYSHHVDNVAREG
                     GGRWRLDAKDTRTGDRRSTTAKFVF"
     gene            complement(777..1946)
                     /locus_tag="VIQ50_08105"
     CDS             complement(777..1946)
                     /locus_tag="VIQ50_08105"
                     /inference="COORDINATES: protein motif:HMM:NF021778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-propeller fold lactonase family protein"
                     /protein_id="HEY9360380.1"
                     /translation="MTANTVFYASTGPQLTLFGLDVAKAALEKRNAVVLPANVQYAWP
                     HPSKRYLYVVSSDGGPGAAGTTHRANAFRIDPVSGSLQSHGEPQSLPSRPIHVSVDAS
                     GEYLLTAYNAPSSVCVHRLNADGYIGEAVHQGDKLDVGIYAHQIRTTPDNSAAILVTR
                     GNNAADGKPEDPGALKLFAFKRGALSNLASIAPASGLGFGPRHFDFHSSAPWVYVSVE
                     RQNKLYTYQLQSDGVLGGEPLFVKDTLADPVNVKPGQGAGAIHVHPNGRFVYLTNRNQ
                     DEVDFQGRKVFNDGENNVAVFAIDEKTGEPNLIQTVEGHGIQLRTFGIDPSGRLLLAA
                     SIKPLLVREGNAVKTLSAGITVYRINADGTLAFVRKYDVDTGKGQQFWSGVVALA"
     gene            2075..2875
                     /locus_tag="VIQ50_08110"
     CDS             2075..2875
                     /locus_tag="VIQ50_08110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018067280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9360381.1"
                     /translation="MRLKDKIAIVVGAGQSPGEGMGNGRATVLRFAQEGAKVLAVDNH
                     LGSAEETVAMARQSGGECVAFEADVTKEATLAAMAEAARRRWGRIDVLHYNVGVSIAG
                     GDAPLAEITEAAFDRIMTINLRGAIMACKHVLPIMRAQRSGVIITISSVAAWEQYPNV
                     AYKATKAGMIAFTQQLAIQNAEFGVRANVILPGLMDTPMAVDTRARASGKTRAEVAAS
                     RDARVPLRHKMGTAWDVANAALFLASDEASFITGVALPVDGGALVHIN"
     gene            2979..5129
                     /locus_tag="VIQ50_08115"
     CDS             2979..5129
                     /locus_tag="VIQ50_08115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011930933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HEY9360382.1"
                     /translation="MPGPKSSPPPLAEGAIFTCPMHLQIRQVGPGFCPICGMALEPEL
                     PAAEAPLNPELADMTRRFWVALALALPVVALEMGGHLTNLHVLLGQKSSNWLQFVFAT
                     PVVLWGGWPFFVRGWQSLVTRNLNMFTLIAMGVGVAWLYSVIAILLPGLFPPAFRSPD
                     GAVAVYFEAAAVITVLVLLGQVLELRAREQTSGAIRALLDLAPKTARRLKADESEEEV
                     PLDVIAVGDRLRVRPGEKIPVDGELIEGRSAVDESMVTGESMPVTKEVGAKVIAGTLN
                     ATGGFIMRAEKVGRDTMLSRIVQMVAAAQRSRAPIQRLADQVSGWFVPTVIAVALVAF
                     AAWGIYGPEPRFAFGLVAAVTVLIIACPCALGLATPMSIMVGVGRGAEVGVLIKNAEA
                     LERMEKIDTLVVDKTGTLTEGKPKVVAVVPAKDFEESQVLRLAASLEKASEHPLALAI
                     VAAAHERGLNMSTVTEFNSPTGKGVVGVVDAQRLALGNANFLRELHIQPGELEQDAER
                     FRHDGATAIFLGVDGRLAAVIAIADPVKATTPDALNALAKEGVRVVMLTGDNRITAQA
                     VARRLGIAEVEAEVLPDQKSAVVEKLQREGRSVAMAGDGVNDAPALAAAEVGIAMGTG
                     TDVAIESAGVTLLKGDLIGIVRARRLSQATMRNIRQNLFFAFLYNAAGVPIAAGVLYP
                     MFGILLSPIIAAAAMALSSVSVVGNSLRLRHSRL"
     gene            complement(5528..>6493)
                     /locus_tag="VIQ50_08120"
     CDS             complement(5528..>6493)
                     /locus_tag="VIQ50_08120"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HEY9360383.1"
                     /translation="PWRPSGAALEDAKRDATLLALKLQEDCGIDIVTDGEQSRQHFVH
                     GFLETVDGIDFARKVEIGIRADRYKAMVPTVTSALRLKSRVHAREARLARAHTRSKLK
                     FTLPGPMTIVDTVADAHYGDRVKMAMAFADLLNAEARALEADGVDVIQFDEPAFNVYL
                     REVEAWGIDALHRAIEGLSCATAVHICYGYGIKANIDWKATLGNEWRQYEAIFPALAR
                     SRIGQISVECRNSRVPIGLLKLLHGKDVQVGVIDVASEEVETADEVAAVIGEAMNYLP
                     KEAIIAGTNCGMAPMQWDVAFAKLAALGKGAELARKRLGCGFLER"
BASE COUNT         1155 a         2000 c         2130 g         1208 t
ORIGIN      
        1 gaaagacgaa ttttgcggtg gtcgagcgcc ggtcgccggt cctcgtgtct ttggcgtcca
       61 gccgccagcg cccgccgccc tcgcgagcga cattgtccac gtggtgggag taatggacgg
      121 caaagcccgg gagccgctgg agatagccga cgagatggcg ggtgagggaa ccgtaatcga
      181 cgtcggcgcc ggtgatcatg cgggtcacgg ccacggtctc attgggcgca cggccttcca
      241 tcacgagcgg aatccattcc gcgatttgcc gcttgtcctc cgtgtattcc atcccttggt
      301 aggtgtggtg cgcggtcaac gctgcgtgtc gctttttgag gaaagccacg tctgcggcgc
      361 cgcgaacgag actcatgtgc ggacagggat ggatgaatga gcgcgggtcg gcgatcgcac
      421 ccttggtcac gagataggac cacagctgcc gggagaggtc gaactcgacg ttgacctcga
      481 gcgccttcga aatatcgatg ctgccgtcgc tgcgttccgg cgtgtagttg agctcgcaca
      541 atgccgcatg cccggtgccg gcgttattcc aggcgtcgga actctcctcg gccgcgccgt
      601 ccaacgtctc gaacatctcc acggtgagcg tgggctcgag ttccttgagg aacacggcca
      661 aggtggcgct catgatgccg gcaccgacca tcacgatatc cggttccgat acggggcgat
      721 tttcggccat gcactcctcc gatcaggacg acaagctggg gcttgctgcg cgatggtcac
      781 gcaagcgcga ccacaccgct ccagaattgc tgacccttgc cggtatcgac atcgtacttg
      841 cgcacaaatg ccagcgtgcc gtctgcattg atgcgataga ccgtaatgcc ggcgctcagc
      901 gtcttgaccg cgtttccttc gcgcaccaac aacggcttga tgctcgctgc cagcagcagc
      961 cgcccgctcg gatcgatgcc gaaggtccgc agttgaatgc cgtgaccctc gaccgtctgg
     1021 atcaggttcg gctcgccggt cttctcgtca atggcgaaga ccgcaacgtt attctcgccg
     1081 tcattgaaaa cctttcggcc ttggaagtcc acctcgtcct gattgcggtt ggtgagatag
     1141 acgaagcggc cgttcggatg gacgtggatc gctcccgcgc cttggcccgg tttgacgttg
     1201 acgggatcgg ccaacgtgtc cttcacgaag agcggctcgc cacccagcac gccgtcggat
     1261 tgaagctggt aggtatagag tttgttctgc cgctcgaccg agacatagac ccacggcgcg
     1321 ctcgagtgaa aatcgaaatg ccgcggtccg aagcctaggc cgctcgcggg cgcgatcgaa
     1381 gcgagattcg acagcgcgcc gcgcttgaat gcgaagagct tgagtgcgcc cggatcttcg
     1441 ggctttccat cggcggcgtt gttgccgcgt gtgaccagga tggccgcgct gttgtcgggc
     1501 gtcgtgcgga tctgatgggc gtagatgccg acatcgagct tgtcgccctg gtgcacggcc
     1561 tcgccgatgt agccgtcagc gttgagccgg tgcacgcaaa cgctactcgg agcgttgtag
     1621 gcggtgagca ggtattcgcc tgaggcatcg acgctgacat ggatcggacg cgagggcagc
     1681 gattgcggct caccatggga ttgcaacgac ccagacacgg gatcgatgcg gaaggcgttg
     1741 gcgcggtgcg ttgtgccggc agcgcccggt ccgccgtcgc tggaaacgac gtagaggtat
     1801 cgcttcgagg ggtggggcca agcatattgg acgttggcag gcagaacgac cgcgttgcgc
     1861 ttttcgagcg cagctttggc gacgtcgagg ccgaacaggg tcaactgcgg gccggtgctg
     1921 gcgtagaaaa ccgtgtttgc tgtcacgtgg ccactccagc caaatttgcc gccctccggg
     1981 caatccggcc caacgagctt gatccatggc gcctatgagg ctcgtttccg tcgcagaatt
     2041 tccataagct ggcggccgca tcatcgagga tcacatgcgt ctcaaggaca aaatcgccat
     2101 cgtcgtcggc gcaggccagt ctccgggcga gggcatgggc aacggccgcg ccaccgtgct
     2161 gcgcttcgct caagaagggg ccaaggtgct cgccgtcgac aatcatctcg gctccgccga
     2221 agagacggtg gcaatggcgc ggcagtcggg cggggaatgc gtcgcgttcg aggcggatgt
     2281 taccaaagag gcgacgctcg ccgccatggc cgaggccgcg cggcgacgat ggggccgcat
     2341 cgacgtgctg cactacaacg tcggcgtgag tattgccgga ggcgatgcgc cgctcgccga
     2401 gatcaccgag gcggcattcg accgcattat gacaatcaac ctgcgcggtg cgattatggc
     2461 gtgcaagcat gtcttgccga tcatgcgcgc gcagcgctcg ggcgtcatca tcacgatttc
     2521 gtctgtcgcc gcctgggagc agtatccgaa cgtggcttac aaggcaacca aagccggcat
     2581 gatcgccttc acccagcagc ttgcgattca gaacgcggaa ttcggcgtgc gcgccaacgt
     2641 catcctgccg ggattgatgg acacgccgat ggcggtcgac acgcgcgccc gcgcgagcgg
     2701 gaagacccgc gccgaggtcg ccgcctcgcg cgacgcgcgg gtgccgctgc gccacaaaat
     2761 gggtaccgcg tgggatgtgg cgaacgcagc gctgttcctc gcgtccgacg aggcgagttt
     2821 cattaccggc gtggcgctcc cggtcgatgg cggtgcgctc gtccacatca actaaaactc
     2881 tcgggctgca atccctaagt tacccagtca tggcccacgc cagctccacg gataagcaga
     2941 ccggctgctg ttcggcaggc tccgcacatc atgggcaaat gcctgggccg aagtcgtcgc
     3001 cgccgcccct cgccgagggc gcgatcttta cctgcccgat gcatctgcag atccggcagg
     3061 tcggtcccgg cttctgcccg atctgcggca tggcgctgga gccggaattg cccgccgccg
     3121 aagcgccgct gaaccccgag cttgcggaca tgacgcggcg gttctgggtc gcgctcgcac
     3181 tcgcgcttcc ggtcgttgca ctcgaaatgg gcggccatct caccaatctc cacgtgctgc
     3241 tcggccagaa gtcctcgaac tggctgcaat tcgtcttcgc cacgccggtg gtgctgtggg
     3301 ggggttggcc gttcttcgtg cgcggttggc aatccctcgt cacgcgcaac ctcaacatgt
     3361 tcacgctgat cgccatgggc gtcggcgtgg catggctcta cagcgtgatt gcaatcctgt
     3421 tgccgggctt gtttccgccg gcatttcgca gtcccgacgg cgcggtcgcc gtctatttcg
     3481 aagccgcggc cgtgatcacc gtcctcgtgc tgctcggtca agtgctggag ctgcgggcgc
     3541 gcgaacagac gtcgggagcg atccgggcgt tgctcgatct cgcccccaag acggcacggc
     3601 gcttgaaggc ggacgaaagc gaagaggagg tgccgctcga cgtgatcgcg gtgggtgatc
     3661 ggctgcgggt tcgtcccggc gagaagatcc cggtcgacgg cgaattgatc gaaggacgtt
     3721 cggcggtcga cgagtcgatg gtgacggggg aatccatgcc ggtcaccaag gaggtgggcg
     3781 cgaaggtcat cgccggcacg ctaaacgcca ccggcggctt catcatgcga gccgaaaagg
     3841 tcggccgcga cacgatgctc tcgcgcatcg tgcaaatggt tgccgcggcc cagcgctcgc
     3901 gggcgccgat ccagcggttg gcggaccagg tctcgggctg gttcgtgccg acggtgatcg
     3961 cggtcgctct cgtcgcattc gccgcgtggg gcatctacgg gcccgagccg cgcttcgcgt
     4021 tcggactggt cgccgccgtc acggtcttga tcatcgcctg tccgtgtgcg ctcggtttgg
     4081 cgacaccgat gtcgatcatg gtcggtgtgg gacgcggcgc ggaagtcggc gtattgatca
     4141 agaacgccga agccctggag cggatggaaa agatcgacac gcttgttgtc gacaaaaccg
     4201 gaacgctgac cgaaggaaag ccgaaggtcg tggcggtcgt ccccgcgaag gacttcgagg
     4261 aaagccaagt tttgcgcttg gccgcgagtt tagagaaggc cagtgagcat ccgcttgcgc
     4321 tggcgatcgt cgctgccgcc cacgaacgcg gcttgaacat gtcgaccgtc accgagttca
     4381 attcgcccac cggcaagggc gtcgtgggtg tggtcgatgc gcaacggctc gcgctgggaa
     4441 atgcgaactt cctgcgcgaa cttcacattc agccgggcga attggagcaa gacgccgaac
     4501 ggtttcgcca cgacggcgca acggcgattt ttctgggcgt cgacggcagg cttgcagcag
     4561 tcattgccat cgccgatccg gtgaaagcaa ccacccccga cgcgctcaac gcgctcgcca
     4621 aagaaggcgt gcgggtggtg atgctcacgg gcgataaccg catcacggcg caggccgttg
     4681 cgcggcggct cggaatcgcg gaagtcgaag ccgaggtgct gccggaccag aagagcgccg
     4741 tcgtcgagaa gctgcagcgc gagggtcgtt cggtcgccat ggccggcgat ggggtcaacg
     4801 acgcgccggc gctggcggct gccgaagtag gcatcgccat gggcactggc accgatgtcg
     4861 cgatcgaaag cgcgggcgtc acgctgctca aaggcgattt gatcgggatt gtgcgcgcgc
     4921 gccggctctc gcaggcgacc atgcgaaaca tccggcagaa cctattcttc gcctttctct
     4981 acaacgccgc gggtgtgccg atcgccgccg gggtgctcta tcccatgttc ggcatcctgc
     5041 tctcgccgat catcgccgcg gcggcaatgg cgctgtcgtc ggtgagcgtc gtcggcaatt
     5101 cgttgcggct gcgacatagc aggttgtgag cgtaaaagga catgctctag cgtagtgccc
     5161 tcagtttgaa atttccgggc gtagtcgaat ggactgaggt ggcatagatt cggctggctg
     5221 gaaaaggagc gccctgcccg tggatactgt catattcagg ggtcgcccag acgtccgcaa
     5281 tgagtgtgat caatggacgc tggtccgaga tgcccaggat caagaagatt ttgtaatcca
     5341 agagcatgtc aaacacgatg cgatgttgtc agggaaacca tatgcgcgtc tggtaagacg
     5401 gatgacagtg gcggaattcc taggcacgga tcaaccgcca gcggtaaaaa gtaaattgca
     5461 ggttattcta gagggacgga atgcaccgag gcccccgagc tgagaagcgc cccgccgacg
     5521 tgaggcacta tcgttctagg aagccgcaac ctaacctctt gcgtgcgagc tcagcgccct
     5581 tgccgagcgc cgcgagcttg gcgaacgcga catcccactg catcggcgcc atgccgcaat
     5641 tcgtgccggc gatgatcgct tctttgggca ggtaattcat cgcctcgccg atgactgcgg
     5701 cgacctcgtc cgccgtctcg acctcctcac tcgccacatc gatcacgccg acctgcacgt
     5761 ccttgccatg gagcagcttc aacaatccga tcggaacgcg ggagttgcgg cattcgaccg
     5821 aaatctggcc gatccggctc ctggcgagcg ccgggaaaat cgcctcgtat tgccgccatt
     5881 cattaccgag cgtcgctttc caatcgatat tggccttgat gccatagccg tagcagatgt
     5941 gaacggccgt agcgcagctg agcccctcga tcgcgcggtg cagcgcatcg atgccccacg
     6001 cttcgacctc ccgcaaatag acattgaacg ccggctcgtc gaattgaatg acatccaccc
     6061 cgtcggcctc gagcgcgcgc gcctcggcgt tgagcagatc ggcgaacgcc atcgccatct
     6121 tcacccggtc gccatagtgg gcatcagcga cggtatcgac gatggtcatc ggccccggca
     6181 gcgtgaactt gagtttgctc cgtgtgtgcg cgcgggcaag ccgggcttcg cgcgcatgca
     6241 cgcgcgattt gaggcgcagc gctgacgtca ccgtcggcac catggccttg tagcggtcag
     6301 cccggatccc gatttcgacc ttgcgggcga aatcgatgcc gtcgacggtc tcgagaaagc
     6361 cgtgcacgaa atgctggcgc gactgctcgc cgtcggtgac gatgtcgatg ccgcaatcct
     6421 cttgtagctt gagcgcgagc agcgtcgcgt cgcgcttggc atcctcgagc gcggcgccgg
     6481 aagggcgcca ggg
//
LOCUS       DATCWM010000418         2218 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_332443, whole genome shotgun sequence.
ACCESSION   DATCWM010000418 DATCWM010000000
VERSION     DATCWM010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2218)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2218)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2218
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_332443"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            125..658
                     /locus_tag="VIQ50_08125"
     CDS             125..658
                     /locus_tag="VIQ50_08125"
                     /inference="COORDINATES: protein motif:HMM:TIGR02444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02444 family protein"
                     /protein_id="HEY9360384.1"
                     /translation="MTAPASPSAGSPFWRFSLRFYRRSEVADACITLQEQAGVDVNLL
                     LFLLWHATQKRALSTAEISELEGRIAPWRNMTVVPLRSMRRALKSPPALVGGAAAELF
                     RTKIKAAELEAERLQQEAMHELAVPSLLGNDAVSLEAAARANIAAYAALCGGPFPSSA
                     SETLLAALASLERNPEE"
     gene            660..1040
                     /locus_tag="VIQ50_08130"
     CDS             660..1040
                     /locus_tag="VIQ50_08130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013525193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEY9360385.1"
                     /translation="MDKETYDRGLNMRRKVLGEEYVDRALKSADDFNRDFQRIVTQYC
                     WGEAWGDDTLTPRERSILNLGMIAALGKMEEFQTHIRGALGNGLTVNEIRAVLTQIAV
                     YCGIPVGVDCFRMAKSVLGEAKKT"
     gene            1212..>2218
                     /locus_tag="VIQ50_08135"
     CDS             1212..>2218
                     /locus_tag="VIQ50_08135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007613704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEY9360386.1"
                     /translation="MVFRTAGAIAALLTGLGLSGGSASAQYYPPAQAYPPPQAYPPAQ
                     GYPAYRPLPPVADADDNQIYDLQGRPLPPAAVEPVAPAPRYGHGAPAYPDQATLPPPQ
                     GYREQQAPQGYGAPNPSYASPPAGVQAQPDGARPPLPISPGQIGAGQGDQNATGAMAA
                     FPAEVRPETGPKKQLPPQFRRTLVDYSTKEPAGTIIIDTPNTYLYLVLGQGKALRYGI
                     GVGREGFTWSGAERVTKMAEWPDWTPPEEMIVRQPYLPRFMAGGDTNPLGARALYLGK
                     TIYRIHGTNQPSTIGTFVSSGCIRLTNDDVTDLFTRVKVGTRVVVMPGKPPPTAAASS
                     AP"
BASE COUNT          377 a          741 c          721 g          379 t
ORIGIN      
        1 gcatgggtcg ggcggagcgc cgggccgagc gggagcgcga cggcgtgccg ctcaatgcgg
       61 cggtcctggc gcaggtcgac gagctcgcga agtcgctcgg catcactccg cttggcgcgc
      121 gcacatgacc gcgccggcat cgccatccgc gggatcgccg ttctggcgct tctcgctgcg
      181 cttctaccgc cggagcgagg tggcggacgc ctgcatcacg ctgcaagagc aggcgggggt
      241 cgacgtcaat ctgctgttgt tcctgctctg gcatgcgacc cagaagcggg cgttgtcgac
      301 ggcggaaatc tccgagctcg agggacgcat cgcgccttgg cgcaacatga cggtcgttcc
      361 actgcgcagc atgcggcgcg cgttgaagtc gccgcccgcg ctcgttggcg gcgcggccgc
      421 ggagctcttt cgcaccaaga tcaaggcggc cgagctcgag gccgagcggc tgcagcagga
      481 ggcgatgcac gagcttgccg tcccatcgct gctcggaaac gatgccgtct cgctcgaggc
      541 ggctgcgcgt gccaatatcg cagcctacgc ggcgctgtgc ggtggcccat ttccctcttc
      601 cgcaagcgaa accctgctcg cggcgcttgc cagcctcgag cgcaacccgg aggaatgaca
      661 tggacaaaga gacctatgac cgcggcctta acatgcgccg caaggtgctc ggcgaagagt
      721 atgttgatcg cgcgctcaag agcgccgacg acttcaatcg cgatttccag cgcatcgtca
      781 cccagtattg ctggggagag gcctggggcg acgacacgct gaccccgcgc gagcgctcga
      841 tcctcaatct cggcatgatc gccgcgctcg gcaaaatgga ggaattccag acccacattc
      901 gcggggcgct tggcaacggc cttacggtga acgaaatccg cgccgtactt acgcagatcg
      961 cggtctattg cggtatcccg gtcggggtgg attgcttccg catggcgaag tcagttttgg
     1021 gtgaagcgaa gaagacgtaa aggctcgccc gggccgcctc ggaacggggg ctaagtcctt
     1081 gagctacgtc gggttccatc ggcacggttt tatcaagagg ttggtcatct ttttccccct
     1141 attgtcttga atgtgccttg ttcctggtcg atttcatggg tcgatccggg gttgcgtgag
     1201 ggggaggggg aatggttttc cgcaccgcag gtgccatcgc ggcgttgctg accgggctcg
     1261 gactgtccgg cgggagcgcg tcggcgcagt actatccacc ggcacaagcc tacccgccgc
     1321 ctcaggctta tcctcctgcc cagggctatc ccgcctatcg gccgcttccg ccggtcgccg
     1381 acgccgacga caaccagatc tacgatctgc agggccgtcc gcttccaccg gctgcggtgg
     1441 agcccgtggc gcccgccccg cgttacggac acggagcgcc ggcttatccc gatcaggcga
     1501 cactgccgcc gcctcagggt tatcgcgagc aacaagcgcc ccagggctac ggcgcgccca
     1561 atccgagcta cgcatcgccg ccggccggtg tccaagccca accggacggc gcgaggccgc
     1621 cgctgccgat cagccccggc cagatcggcg ccggacaagg cgatcagaac gcgaccggcg
     1681 ccatggcagc gtttcccgcc gaggtacggc cggaaaccgg cccgaagaaa caattgccgc
     1741 cgcagttccg tcgcacgctg gtcgattact ccacgaagga gccggccggc acgatcatca
     1801 tcgacacgcc gaacacctat ctctatctgg ttctcggcca gggtaaggcg ttgcgctacg
     1861 gcatcggcgt gggccgcgag ggcttcacgt ggtcaggcgc cgaacgggtc acgaagatgg
     1921 cggaatggcc cgactggact ccgcccgaag agatgatcgt gcgtcagcct tatctgccgc
     1981 gcttcatggc tggtggcgac accaatccgc tcggagcgcg cgcgctttat ctcggcaaga
     2041 caatttatcg catccacgga accaaccagc cttcgaccat cgggaccttc gtgtcctccg
     2101 gctgcatccg tctcaccaac gacgacgtga cggatctctt cacacgcgtg aaagtcggca
     2161 cgcgcgtggt ggtgatgccg ggaaaaccac cgccgactgc cgcggcctcg tcggcgcc
//
LOCUS       DATCWM010000419         2909 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_364813, whole genome shotgun sequence.
ACCESSION   DATCWM010000419 DATCWM010000000
VERSION     DATCWM010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2909)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2909)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2909
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_364813"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..490
                     /locus_tag="VIQ50_08140"
     CDS             <1..490
                     /locus_tag="VIQ50_08140"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9360387.1"
                     /translation="FSVPFSSETLHWFVLAVVTASYLILRRITQSPFGMVLQSIRENE
                     PRTRAIGYAVERYKIVAVMLSGLFAGLAGVLYAVQNRFAAPDFVYFLVSGETVIFNVM
                     GGVGTLVGPIVGAGFFLLLRETFSRFFTEYYLIPVGVIFIAMVIFLPQGLLGFMRRWL
                     NQ"
     gene            617..>2909
                     /locus_tag="VIQ50_08145"
     CDS             617..>2909
                     /locus_tag="VIQ50_08145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015342623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEY9360388.1"
                     /translation="MAKFGIGQAVRRVEDGRFLLGQGRYVDDISLPGQCYAVTLLSPH
                     AHARIKRVDVAKAKAAPGVLCVLTGADAAAEKLGSFTAHLMPEDFGAPKGHRTFQPVL
                     IAEKVRFVGDRVAFVVAETLSQARDAAELIEVEYEPLPTVVLLEDAAKDGAPKVWEDC
                     PQGNVGFRLMFGNKEATDAAFAQAKHVVELRIENNRLSPVAMEPRAAIGDYDPAEDSY
                     TLYSTSQNPHGVRMEMSHIFHVPENRIRVISPDVGGGFGLKGNPFPDDALVLWAARRL
                     RRPVKWVASRSESMLTDHCGREMVYYGELALDEHGKILALRARCLFQLGAYFVGAALA
                     AGAFSVRFIPEAYDIQTMHILSQGLFTNTSQSGPYRGAGRPEAAYFMERLIEHAARVI
                     GVDPAEIRRRNLIPPSKLPYATPTLWNYDSGEFQRLMDKCIELSDWNGFAARKKSSQK
                     NGKLRGRAVSYYIEFGGIFNDRMDLRFDPGGTLTILGGTHSHGQGHATVFAQLVHEWL
                     GLPLEDIHYVQGDTAQVPIGRGTYGARSAIVGGNALKAASEAIIEKGKQLSAAIMEAD
                     AVDIEFKDGQYRVVGTDKAITISDVAKAAYAPMGPLTDKFGVGLEASGSYSANPPSHP
                     NGAHVCELEVDPETGAVTIDRYFVVDDLGRVLNPLIVRGQIHGGVVQGLGQALLEHQV
                     YDRQSGQLISGSFMDYGMPRADTMPSVEAELEEVPCKTNPLGVKGIGESGTIGAPPTV
                     INAVIDALTPLGVNDIDMPATPMR"
BASE COUNT          511 a          946 c          932 g          520 t
ORIGIN      
        1 gttctcggtg ccgttctcgt cggagacgct gcactggttc gtgctcgccg tcgtcaccgc
       61 gtcgtacttg atcctgcgac gtattacgca atcgcccttc gggatggtgc tgcagtcgat
      121 ccgcgagaac gagccgcgca cgcgcgcgat cggctatgcg gtcgagcgct acaagatcgt
      181 ggcagtgatg ctctccggcc ttttcgccgg ccttgccggc gtgctctacg cggtgcaaaa
      241 ccgcttcgcc gcgccggatt tcgtctactt cttggtttcc ggcgagaccg tgatcttcaa
      301 cgtcatggga ggcgtcggca cgctggtggg gccgatcgtc ggcgccggtt tcttcctgct
      361 gttgcgcgag acgttctccc gattcttcac cgagtactac ctcattcccg tgggcgtaat
      421 cttcatcgcc atggtgatct tcctcccgca aggcctgctc ggcttcatgc ggcgctggct
      481 caatcaatag ctcaacccac gcgcgacatt ccggattcgt cgatgcacga cgcgcgcggg
      541 agtgctggca tgcgccccgc ctctccagta acatcacccc agaacatcgc ggcatgaaac
      601 agagggcaaa gcgactatgg ccaagttcgg catcggacaa gctgtgcgca gagtggagga
      661 cgggcgcttc ctccttggac aaggacgcta cgtcgatgac atcagcttgc ccgggcaatg
      721 ttacgccgtc acgctgctct cgccccatgc tcatgcccgc atcaagcggg tcgacgtcgc
      781 caaggccaag gccgcgccgg gcgtgctttg cgtgctcacc ggcgccgacg ccgcggcaga
      841 gaagctcggc agcttcaccg cgcatctgat gcccgaagac ttcggcgcgc ccaaggggca
      901 tcgcacgttc cagccggttc tcatcgccga gaaggtgcgc ttcgtcggcg accgcgttgc
      961 tttcgtcgtc gccgagacgt tgagccaggc gcgcgacgcc gccgagctga tcgaggtgga
     1021 gtatgagccg ctgccgacgg tggttcttct cgaagacgcc gccaaggacg gcgctcccaa
     1081 ggtctgggag gattgcccgc agggcaatgt cggcttccgg ctgatgttcg gcaacaagga
     1141 ggcaaccgac gccgccttcg cccaagccaa gcacgtggtc gagctgcgga tcgagaacaa
     1201 ccggctctcg ccggttgcca tggagccgcg cgccgccatt ggcgattacg accccgccga
     1261 ggactcctac acgctctaca gcacctcgca gaatccgcac ggcgtgcgca tggagatgtc
     1321 gcacatcttt cacgtgccgg agaaccgcat ccgcgtgatt tcgcccgatg tcggcggcgg
     1381 tttcggcctc aagggcaatc cctttcccga cgacgcgctg gtgctgtggg cggcgcgtcg
     1441 cctgcgccgt ccggtgaaat gggtggcgag ccgatcggaa agcatgctga ccgatcattg
     1501 cggccgtgag atggtgtatt acggcgagct cgcactcgat gagcacggca agattctcgc
     1561 gctgcgggcg agatgcctgt tccagctggg cgcctatttc gtcggcgcgg cgctcgctgc
     1621 gggcgcgttc tcggtgcgct tcattcccga ggcgtacgac atccagacca tgcatatctt
     1681 atcgcagggt ctgttcacca acacatcgca gtcgggacct tatcgcggcg ccggacggcc
     1741 cgaggccgcc tatttcatgg agcggctcat cgagcacgcc gcgcgggtga tcggtgtgga
     1801 ccccgccgag atcaggcggc gcaacctcat tccgccgagc aagcttccct atgcgacgcc
     1861 cacgctgtgg aattacgaca gcggcgaatt ccagcggctg atggacaaat gcattgagct
     1921 cagtgattgg aatggttttg cggcgagaaa gaagtcctcg cagaagaacg gcaagctgcg
     1981 aggccgcgcg gtgagctatt acatcgagtt cggcggcatc ttcaacgatc gcatggacct
     2041 gcggttcgat cccggcggca cgctcaccat tctcggcggg acgcattcac acggccaggg
     2101 acacgccact gtgttcgcgc agctcgtgca cgaatggctc ggcctcccgc tcgaggacat
     2161 tcactacgtg cagggcgaca ccgcccaggt tccgatcggc cgcggcactt acggcgcgcg
     2221 cagcgcgata gtcggcggca acgcgctcaa ggcggcgagc gaagctatca tcgaaaaggg
     2281 caagcagctc tccgccgcga tcatggaagc ggacgcggtc gatatcgaat tcaaggatgg
     2341 gcaatatcgg gtggtcggca ccgacaaggc gatcaccatt tccgacgtcg ccaaggccgc
     2401 ctatgcgccg atgggaccgc tgaccgacaa gttcggggtc gggctggagg cgagcggcag
     2461 ctacagcgcc aatccgccca gccatcccaa cggcgcgcat gtgtgcgagc tggaggtgga
     2521 tcccgagacc ggggcggtga cgatcgaccg ttatttcgtc gtcgacgacc tcggccgcgt
     2581 gctcaacccg ctcatcgtgc gcgggcaaat tcacggcggc gtggtgcaag gcctggggca
     2641 agcgctgctg gagcaccagg tctacgaccg ccaatccggc cagctgatct ccggcagctt
     2701 catggattac ggcatgccgc gcgccgacac gatgccgagc gtggaggccg agctcgaaga
     2761 ggtgccgtgc aagaccaatc cgctcggggt caagggcatc ggcgagtccg ggaccatcgg
     2821 cgcgccgccg acggtgatca atgcagtcat cgacgcgctc accccgctcg gcgtgaacga
     2881 catcgacatg ccggcaaccc ccatgcgcg
//
LOCUS       DATCWM010000420         2102 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_132554, whole genome shotgun sequence.
ACCESSION   DATCWM010000420 DATCWM010000000
VERSION     DATCWM010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2102
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132554"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..252)
                     /locus_tag="VIQ50_08150"
     CDS             complement(<1..252)
                     /locus_tag="VIQ50_08150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY9360389.1"
                     /translation="MVECISAITLATHDMSRAVRFYRMLGLDIIYGGGDAAFTSFRAG
                     TSYLNLVAQPIERKWSWWGRVIFYHSDVESLHASVLAAGY"
     gene            complement(277..474)
                     /locus_tag="VIQ50_08155"
     CDS             complement(277..474)
                     /locus_tag="VIQ50_08155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360390.1"
                     /translation="MTLEFTVGISTAGKHESVTVAAEDALIAALKVKCERPNALINYV
                     RRRNKRGDLRHPHEAIAGKRE"
     gene            complement(493..1179)
                     /locus_tag="VIQ50_08160"
     CDS             complement(493..1179)
                     /locus_tag="VIQ50_08160"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: protein motif:HMM:NF001453.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HEY9360391.1"
                     /translation="MSAKDFEILRQRMLVEISAGVLHVSDVLGKAALDERVMTAMANV
                     ARHEFVPVELQPYAYANTPLPIGFEKTISQPFIVALMTDLLEISADDVVLEIGTGLGY
                     QAAVLSQLARKVYSMELIEELARQAKQRLRRQGCTNIEIKIGNGYHGWSEHAPFDKVI
                     VTAAPDLIPPPLLHQLKAGGKMIIPAGLPDAQQLVLVEKNGDGKVTTKEILQVRFSQL
                     EETEPGITSN"
     gene            1313..1996
                     /locus_tag="VIQ50_08165"
     CDS             1313..1996
                     /locus_tag="VIQ50_08165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008974378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta family hydrolase"
                     /protein_id="HEY9360392.1"
                     /translation="MNRSDAESLTLRVDDTHIVSGLLLVPPQARACYVLAHGAGAGML
                     HPFMEAVATELAQRAIATLRYQFPYMEQGSKRPDPPKLAHATVRAAVGQAARLMPALP
                     RIAGGKSFGGRMTSQTQAASAMPGVRGLVFLGFPLHPAGRPSEERAVHLFQVEVPMLF
                     LQGTRDRLADLGLLERLMERLGTRASLRLVQDADHSFRVPARADAVVKGEMMDAVAEW
                     IFALISRRR"
BASE COUNT          363 a          661 c          651 g          427 t
ORIGIN      
        1 gtagcccgcc gcgagcacgc tggcatgcag cgattcgacg tcggaatgat agaagatgac
       61 ccgtccccac caggaccact ttcgctcgat cggttgcgcg accagattga gatagctcgt
      121 gcccgcccga aaactggtga aggcggcatc gccaccgccg taaattatgt ccaatcccag
      181 catgcggtag aaacggacgg cgcgcgacat gtcatgagtg gccagcgtga tcgcgctgat
      241 gcattcaacc atcgggtaat ccaatcagcc caacgatcac tcgcgtttgc cggcaatcgc
      301 ctcgtgcgga tgacgcagat cgccgcgctt gttgcgccga cgcacgtagt tgatcagagc
      361 attcggccgc tcacatttga ccttgagcgc agcaatgagg gcgtcttccg ccgccaccgt
      421 cacgctctca tgttttccgg cagtgcttat accgacggtg aattcgagcg tcatggcggc
      481 gttctgtccc ggttagttgg acgtgatgcc cggctcggtc tcttccagct gcgagaaccg
      541 gacctgcagg atctccttcg tcgtgacttt tccgtcgccg ttcttttcca ccaggacgag
      601 ctgttgcgca tcgggcaagc ctgcgggaat gatcatcttc ccgccggctt tgagctgatg
      661 gagcaggggc ggcggaatga ggtcgggagc tgccgtcacg atcaccttgt caaacggagc
      721 gtgctccgac cagccatgat agccattgcc aatcttgatc tcaatgttgg tgcagccctg
      781 ccgtcgcagt cgctgctttg cctgccgggc aagctcttcg atgagttcca tgctgtacac
      841 tttgcgcgcc agctgcgaca ggaccgccgc ctgatagcca agcccggtgc cgatttccag
      901 cacgacatcg tccgcgctga tctccagcag gtcggtcatc aatgcgacaa tgaagggttg
      961 ggagatcgtt ttctcgaaac cgatgggaag cggagtattg gcgtaggcgt agggttgaag
     1021 ctcgaccggc acgaactcat gccgcgccac gttagccatt gcagtcatca cgcgttcgtc
     1081 gagggccgcc ttgccgagaa cgtcgctgac gtgaagtacg ccggcggaaa tttccaccag
     1141 catgcgttga cgaagtatct cgaaatcttt cgcgctcatt gcgccatcct acggctagct
     1201 gggggacagc tcgtcgcgcc accgcgtgat attgcgctgc gcccttgttc gctccaggaa
     1261 atgtaggcga aactcgctcc actttctacc gacgggcaag ccgggccgag cgatgaaccg
     1321 ttcagacgcg gaatctttga ctctgagggt cgatgacaca cacatcgttt ccggcctgct
     1381 gctggtcccg ccgcaggcgc gtgcctgcta cgtcctggcg catggggcgg gagcgggaat
     1441 gctccatcca ttcatggaag ccgttgcaac ggagctcgct cagcgcgcca tcgccacgct
     1501 gcgttatcaa tttccgtata tggagcaggg gagcaaacgg cccgaccctc ccaagcttgc
     1561 gcatgcgacg gttcgagccg cggtggggca agccgcccgg ctcatgcccg cacttccgcg
     1621 catcgccggc ggcaaatcct tcggcggtcg catgacgtca cagacgcagg ctgcctccgc
     1681 gatgcccggc gtccgcggcc ttgtttttct cggctttccg ctccatccgg ccggacggcc
     1741 gtcggaagag cgcgccgtgc atcttttcca ggtcgaggtg cccatgctgt ttctacaggg
     1801 cacgcgcgac aggctcgccg accttggcct gctcgagcgg ttgatggaac ggctggggac
     1861 gcgcgcatcg ttgcggctgg tgcaagatgc cgatcactcc ttccgcgtgc cggcgcgtgc
     1921 cgatgccgtg gtcaaggggg agatgatgga tgccgtggcc gagtggattt tcgcgctgat
     1981 ctcccggcgc cgctagctcc tagcgtgtga acgcattcga taggcgccgt gcggggcacc
     2041 ctcgcaggcg ctgcttcgtc gagctgccgg ctaggcgccg cggtccgcct cggaggagcg
     2101 ga
//
LOCUS       DATCWM010000421         2643 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_13809, whole genome shotgun sequence.
ACCESSION   DATCWM010000421 DATCWM010000000
VERSION     DATCWM010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2643)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2643)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2643
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13809"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..906
                     /locus_tag="VIQ50_08170"
     CDS             <1..906
                     /locus_tag="VIQ50_08170"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF024801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004364 - glutathione transferase activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEY9360393.1"
                     /translation="FRRADSRFRGRITADGSSGFKAEAGRYHLYVAHGCPWAHRTLIY
                     RSIKKLKDAITVAYSIPGLRQQGWTFEDDPAFPDCTPDMVNGFRYLHQAYTATDPRYT
                     GKVTVPTLWDKKTGRIVNNESSEIIRMLNSEFAGVADGGTDFYPQPLRAEIDHLNEAI
                     YANVNNGVYRCGFAKSQAAYEASYDALFATLDQLDARLARRRYLLGATLTEADWRLFP
                     TLVRFDVAYFSLFRCNKQRIADYPNLANYMRELYQMPGVAETVKARYYVINYWSIARI
                     NPSGIIPKGTPVDYAAPHDRARLAG"
     gene            930..1931
                     /locus_tag="VIQ50_08175"
     CDS             930..1931
                     /locus_tag="VIQ50_08175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014890473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4331 family protein"
                     /protein_id="HEY9360394.1"
                     /translation="MSNHFTGLSLGPPLGDQRLDLCDLYAFQSPADKNRTVIILNANP
                     NADALHPDAIYRLNIDSDGDYLTDIAFSYVFSKPQNGGQTVSVFVATGPESRSAEAVG
                     RKIMTDAEVSFGGKPNIIKSGPYTFFAGSRSDAFFFDFDGIKNLFDIRGKRNFTEPHL
                     GGKSPWTGVDSNTKANVFSTVIELPTSELDPKPKIHIWGRCSVRRDGKLLHVDRAGHP
                     SVSSFFNTDDTKEEYNASEPVNDRKRWLDQFVHLMGHTGNYTREEAIAAINKEGTLPD
                     VLTLDPSKPAKYPNGRVFTDDVIDYRIAFLTKNQCPPTGLKPHTDVLKEFPYLGTPH"
     gene            2030..>2643
                     /locus_tag="VIQ50_08180"
     CDS             2030..>2643
                     /locus_tag="VIQ50_08180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HEY9360395.1"
                     /translation="MIPRYTRPEMATIWDPQTRYRIWFEIEAHAADAMAELGIIPKAA
                     AQEIWAKGKDVKFDVARIEEIEREVKHDVIAFLTHLAEIVGPQARFVHQGMTSSDVLD
                     TCLNVQLVRAVDLLIADVDALLAALRRRAFEHKMTPTIGRSHGIHAEPTTFGVKLAYA
                     YAEFFRAKERLICARTEVATSAISGSVGTFAQVDPRVEEHVANA"
BASE COUNT          538 a          893 c          746 g          466 t
ORIGIN      
        1 tttcgccgcg ccgatagccg tttccgcggc cgcatcaccg cggacggctc ctccggcttc
       61 aaggcggagg ccggacgcta ccatctctac gtcgcgcacg gctgcccgtg ggcgcatcgc
      121 acgctgatct atcgttcgat caagaagctc aaagacgcga tcaccgtcgc ctattcgatt
      181 ccgggactgc ggcagcaggg ctggacgttc gaagacgatc cggcgttccc ggactgcacg
      241 cccgatatgg tgaacggctt ccgttatctg caccaggcct ataccgcgac cgatccccgc
      301 tacaccggca aggtcacggt gccgacgctg tgggacaaaa agaccgggcg gatcgtcaac
      361 aacgaatcct cggaaatcat tcgcatgctc aacagcgagt tcgccggcgt cgccgacggc
      421 ggcacggact tttacccgca gccgctgcgc gccgagatcg atcacctcaa tgaggcgatc
      481 tacgccaacg tcaacaacgg cgtctaccgc tgcggcttcg ccaagtcaca ggccgcctac
      541 gaagcctcct acgacgcgct gttcgccacg ctcgaccagc tcgacgcgcg gcttgcgcgc
      601 cggcgctatc tcctcggcgc aacgctcacc gaggccgatt ggcggctctt tcccacgctg
      661 gtgcgtttcg acgtcgccta cttctcgctg tttcgctgca acaagcagcg gatcgccgac
      721 tatcccaatc tcgcaaacta tatgcgcgag ctctatcaga tgccgggcgt cgccgagacg
      781 gtgaaggcgc gctattatgt gatcaattat tggtcgattg cgcggatcaa tccgagcggc
      841 atcattccca agggcacgcc ggtcgattac gcggccccgc acgatcgcgc gcggctcgcg
      901 ggctagaacc ttgttaacag gagaggacaa tgtcaaacca tttcaccgga ctcagtcttg
      961 gcccgccgct cggcgatcaa cggctcgacc tctgcgacct gtacgcattc cagtcgcccg
     1021 ccgacaagaa cagaaccgtg atcatcctca atgcaaatcc caatgcggac gcgcttcatc
     1081 cagacgcaat ctatcgcctc aacatcgata gcgacggcga ttatctgacc gacatcgcct
     1141 tcagctacgt gttctcgaag ccgcagaacg gcggacagac cgtcagcgta ttcgtggcga
     1201 cgggcccgga gtcgcgctcg gccgaagcgg tgggaaggaa gataatgacc gacgccgaag
     1261 tctccttcgg cggcaagccg aatatcatca agtccggccc ctacactttt ttcgccggca
     1321 gccgcagcga cgcgttcttc ttcgacttcg acggaatcaa gaacctgttc gatatcaggg
     1381 gcaaacggaa cttcaccgag cctcatctcg gcggcaagtc gccatggacc ggcgtggatt
     1441 cgaacacgaa agcaaacgtg ttttccacgg taatcgagtt gcccacgagc gagctagatc
     1501 ccaagcccaa gatccacatc tgggggcggt gcagcgtacg acgcgacggc aagttactcc
     1561 acgtcgatcg cgcgggccat ccgagcgtca gtagcttctt caacaccgac gataccaaag
     1621 aggaatacaa cgcgagcgaa cccgtcaacg atcgcaagcg atggctcgac cagttcgtac
     1681 acctgatggg gcataccggc aattacacgc gcgaggaagc gattgccgcg atcaacaagg
     1741 agggcacgct tcccgacgtg ctgactctcg atccgtcgaa gccggcaaag tatcccaacg
     1801 gccgggtctt caccgacgac gtgatcgatt accgcatcgc cttcctgacg aaaaatcagt
     1861 gtccgcccac aggcctcaag ccccacactg acgtcctgaa ggagttcccg tacctgggca
     1921 cgccgcatta ggaaatacgt ggttcagctt ttcgccggaa tcgcgcgtgc gaattgagct
     1981 tgcggcgacg atctgctaca gcgccgttta tgactcgccg gggccgccca tgatcccgcg
     2041 ttacactcgg ccggaaatgg ccacgatctg ggatccgcag acgcgctacc gcatctggtt
     2101 cgagatcgag gcgcacgcgg ccgacgccat ggccgaactt gggatcattc ccaaggccgc
     2161 tgcccaggag atctgggcca aaggcaagga tgtcaagttc gacgtcgcgc gcatcgagga
     2221 gatcgagcgc gaggtcaagc acgacgtcat cgcgttcctc acccatctcg ccgagatcgt
     2281 cggcccgcag gcgcgcttcg tgcaccaggg catgacctcc tccgacgtgc tcgacacctg
     2341 cctcaacgtg cagctcgtgc gcgccgtcga cctcttgatc gccgacgtcg atgcgctgct
     2401 cgcggcgctg cggcggcgcg ccttcgagca caagatgact ccgactattg ggcgctcgca
     2461 cggcatccat gccgaaccca cgaccttcgg cgtcaagctc gcctacgcct acgccgaatt
     2521 ctttcgcgcc aaagagcggc tcatctgcgc gcgcaccgag gtcgcgacct ccgccatctc
     2581 cggctcggtc ggcaccttcg cgcaagtgga tccccgggtc gaggagcacg tcgccaacgc
     2641 cat
//
LOCUS       DATCWM010000422         4246 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_294808, whole genome shotgun sequence.
ACCESSION   DATCWM010000422 DATCWM010000000
VERSION     DATCWM010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4246
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_294808"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1142)
                     /locus_tag="VIQ50_08185"
     CDS             complement(<1..1142)
                     /locus_tag="VIQ50_08185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEY9360396.1"
                     /translation="MNAGLSLSRGRGGTLLPLRFAARELRGGLRGFYVFIACIALGVM
                     AIAGVNSLASGLTDGLAREGRVILGGDLAFTLSLREANADERAFLERQGLVSLATSMR
                     AMARAQDGHTALVEVKGVDAGYPLYGTVALDPQQPLEQALAERDGAFGAAVDRALLVR
                     LGLGPGAQITLGAATIDIRAVLTSEPDRLGGGLGFGPRVLISEQALRASGLLQPGTIV
                     RWHYRLRLPDNDSTDTAMRAVMTAAQAQLPEAGWELRSRVNASPALEQNVERFTQYLT
                     LVGLTALLVGGVGVANAVKGHLDGRREVIATFKALGASGRRVFAIYFTQVLVLAGLGA
                     IPGLLVGAALPFVVAWSLGPRLPLPLAPALHPGDPLLAFLFGLLTAA"
     gene            complement(1216..1944)
                     /locus_tag="VIQ50_08190"
     CDS             complement(1216..1944)
                     /locus_tag="VIQ50_08190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9360397.1"
                     /translation="MQDTSGSGRAEPAVVLSGVNLSLGRDAARVHILKDLDLRIDRGE
                     AIGLLGPSGSGKSTLLMVMAGLERADTGSVVVAGEALDSLSEDSLARFRGRNIGIVFQ
                     SFHLIPTMTALENVAVPLELAGLDEAQERAARELAAVGLSGRRQHYPAELSGGEQQRV
                     ALARALAPDPRILIADEPTGNLDEATGAEIIELLFAGHAQRGTTLVLVTHDPALALRC
                     DRIVRLRSGRIEAVPGGASAGAKL"
     gene            2105..2671
                     /locus_tag="VIQ50_08195"
     CDS             2105..2671
                     /locus_tag="VIQ50_08195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HEY9360398.1"
                     /translation="MRIVALGDSLTAGLGLPVEQTFPAKLERALKAKGIAAEVVNAGV
                     SGDTASGGLARLDWSVPEGTDAVILELGANDMLRGIDPRRTRQALEEIVRRLTERRIP
                     VLLAGMRAAANLGSDYVRDFATIYSDLAVRHDLLFYPFFLDGVAGEAGLNQGDGLHPS
                     AAGVDAIVARILPKVEELVRRARDKRVM"
     gene            2739..3275
                     /gene="thpR"
                     /locus_tag="VIQ50_08200"
     CDS             2739..3275
                     /gene="thpR"
                     /locus_tag="VIQ50_08200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008664 - 2'-5'-RNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HEY9360399.1"
                     /translation="MPRLFTGLEIPSDVGQSLATLRGGLPGARWVDPENYHVTLRFIG
                     DVDDVVAHEIASMLGRVRRQAFELRIEDLKSFGGRKPRQIVATLGPAQALMELQAEHE
                     RLMQRVGLEPEGRKYTPHVSLARLRESSSRQVADYLALRAPFRSPPFKVSRFVLFSSR
                     ASVGGGPYVVEVAYPLAA"
     gene            complement(3299..3874)
                     /locus_tag="VIQ50_08205"
     CDS             complement(3299..3874)
                     /locus_tag="VIQ50_08205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013419891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY9360400.1"
                     /translation="MHDPLPRGGLIRKLWIGEADPYRDHLLRLDPISRRNRFAGAVSD
                     DFVRDYADLAFGIDALIHGFFVDGTLRGAAELRPIGAPMTREAEAAFSIETPWQSHGV
                     GSLLLERTLLAARNRGLKFLHMACLADNKRMQQLARKYEAELNFDFSNVVGEVSAPRP
                     TPLSLMREILADGHGFATAMFDVQSRLLKPV"
BASE COUNT          748 a         1383 c         1380 g          735 t
ORIGIN      
        1 gcggcggtta gaagcccgaa gaggaacgcg agcaaaggat cccccgggtg cagcgccggc
       61 gcgagcggca acggtaggcg aggaccgagg ctccaggcga cgacaaacgg caaggccgcg
      121 ccgaccagga gcccgggtat cgcgccgagg ccggcgagca ccaaaacctg ggtgaaatag
      181 atcgcgaaca cgcgcctacc ggaggcgccc agtgctttga acgtggcaat aacctcgcgc
      241 ctgccgtcga gatgaccctt gaccgcgttg gctacgccga ccccgccgac cagcaacgca
      301 gtgagtccga ccaaagtgag atattgcgtg aaccgttcga cgttttgttc gagcgccggc
      361 gaggcattga cgcgtgagcg caattcccag ccagcctcag gcaattgggc ttgcgccgcg
      421 gtcatcaccg cgcgcatggc cgtatccgtc gagtcattgt cgggaagacg cagccggtag
      481 tgccagcgca cgatagtgcc cggctgcaac aggccgctcg cgcgcagcgc ttgttcgctg
      541 atgagcacgc gcgggccaaa gcccaggccg ccgccaagtc tgtcgggctc cgacgtcagg
      601 acggcgcgaa tgtcgatcgt cgcagcgccg agcgtgattt gggcacccgg cccgaggccg
      661 agccgcacca acagcgcccg atcgacagcg gcgccgaatg ctccgtcgcg ctctgccagc
      721 gcctgttcga gcggctgttg cgggtcgagc gccacggtgc cgtagagcgg atagccggca
      781 tcgacccctt tcacctcgac cagtgccgtg tgcccgtctt gcgcccgcgc catcgcgcgc
      841 atgctcgttg cgagcgagac gaggccctgg cgctcgagaa atgcgcgctc gtcggcgttt
      901 gcttcccgca ggctgagggt gaatgccagg tcgccgccga ggatgacgcg gccctcgcgc
      961 gcgagcccgt cggtgagccc ggaggcgagc gaattcaccc cggcgatcgc cataaccccc
     1021 agcgcgatgc aggcaatgaa cacgtagaat ccgcgcaagc cgccacgcaa ctcgcgcgca
     1081 gcgaagcgca atggcaggag agtgcccccg cggccgcggg aaagcgagag cccggcgttc
     1141 acgcttgcgc ttcctcgccg tcggccgggg ctgctccatc cgcgcaatga acacaaaacc
     1201 cgcgcctcga ttgcttcaca gctttgctcc cgccgacgcg ccgcccggga cagcttcgat
     1261 ccgcccggaa cgcaatcgca caatgcggtc gcaacgcaag gcgagcgccg gatcgtgggt
     1321 gacgaggacc agggtggtgc cgcgttgcgc gtggccggcg aaaagcagct cgatgatttc
     1381 ggcccccgtg gcttcgtcga gattgccggt cggctcgtcg gcgatgagaa tgcgcgggtc
     1441 cggtgccagg gcgcgggcaa gcgcgacgcg ctgctgctcg ccgccggaaa gttcggccgg
     1501 atagtgctgt cgccgcccgc tcaagcccac ggcggcaagc tcgcgcgcgg cgcgctcttg
     1561 ggcctcatcg aggccggcga gttctagcgg cacggcaaca ttttctagcg ccgtcatggt
     1621 gggaatgagg tggaaagact ggaacacaat gccaatattg cgcccacgaa atcgcgccag
     1681 cgaatcttca ctcaatgagt cgagggcctc gcccgcgacc acgacagagc cggtatccgc
     1741 ccgctccaac ccggccatga ccatgagcaa agtcgatttg cccgagcctg atggaccgag
     1801 taagccgatc gcctcgccgc gatcgatgcg cagatcgagg tctttgagga tatgaacccg
     1861 ggccgcgtcc cgcccgagcg acagattgac gccgctgagc acgaccgccg gctctgcgcg
     1921 ccctgacccc gaggtgtcct gcatgttgcg tcgctctttg ctgccttgga ttgcgggctg
     1981 gccggcatcg tccaggtcat atgggagttg cgcggcaccg gtccagacgt ttgcgcgcat
     2041 cgcgattgcg ctggcgctcg cggttgcgct acgtgcgccc gcagccacag cggccgatca
     2101 gccaatgcgc atcgtggcct tgggcgattc gctcactgcc ggacttgggc tgccggtcga
     2161 gcaaaccttc cctgcgaagc ttgaacgggc gctcaaggcc aaaggcatcg cggcggaggt
     2221 cgtcaatgcg ggtgtgtccg gcgacaccgc ctccggcggg ctcgcccgcc tggattggtc
     2281 ggtgccggag ggtacggatg cggtgatcct tgaactcggc gccaacgaca tgctgcgtgg
     2341 gatcgatccg aggcgcacgc gacaagctct cgaggagatc gtgcgccgcc tgacggagcg
     2401 gcgtattcct gtgctgctcg ccgggatgcg ggcggcggct aatctcggca gtgattatgt
     2461 gcgcgatttc gcgacgattt actcggacct cgccgttcgc catgaccttc tgttttatcc
     2521 cttcttcctc gacggcgttg ccggcgaggc cgggctcaat cagggcgacg gacttcatcc
     2581 gagcgccgcc ggcgtcgacg ccatcgtggc gcggatcctg cccaaggtcg aagagcttgt
     2641 ccgccgggcc cgtgacaaac gtgtgatgtg agcgtcatgg ggacgtgcga atctctgcga
     2701 tttgtcctat atgcacatcc aacccgcagt ccttctccat gccccgcctc ttcaccggtc
     2761 tcgaaattcc ctccgatgtc ggtcagtcgc tggccacgtt gcgcggtggc ttgccgggcg
     2821 cacgctgggt cgatcccgaa aactatcacg tgaccttgcg ctttatcggc gatgtcgatg
     2881 atgtcgtcgc gcacgagatc gcatccatgc tgggacgcgt gcgccgccag gcgttcgaat
     2941 tgcgcattga agatctcaaa tccttcggcg gccgcaagcc tcgccagatc gtggcgacgc
     3001 ttggaccggc gcaggccctg atggaacttc aggccgagca cgagcggctg atgcaacggg
     3061 tcgggctcga gccggaaggc cgcaaatata ccccgcatgt ttctctggct cggctacgcg
     3121 aatcatcgag tcggcaggtt gccgactatc tcgcgctgcg tgcccccttc cgctcgccac
     3181 cattcaaggt gtcgcgcttt gtgttgttct cgtcgcgggc gtcggtcggc ggtggcccat
     3241 atgtggttga agtggcctac ccgctggcag cctgatacgg gcgcttccgg cgctgcaatc
     3301 acaccggttt cagcaatctc gactggacgt cgaacatggc agtggcaaag ccgtgaccgt
     3361 cggcaaggat ctcacgcatg agcgagagcg gcgtcggccg cggggccgaa acttcaccca
     3421 cgacgttcga aaaatcgaag ttcaactcgg cctcgtattt gcgggcgagc tgctgcatgc
     3481 gcttgttgtc ggcgagacat gccatgtgta gaaatttgag gccgcgattg cgcgccgcga
     3541 gcagcgtgcg ctcgagcagc agcgagccga cgccgtgact ctgccatggc gtctcgatcg
     3601 agaatgccgc ctcggcctcg cgcgtcatgg gtgctccaat cggccgtagt tccgcggcgc
     3661 cgcgcaacgt gccgtccacg aagaagccgt gaatgagcgc gtcgatgccg aacgcaagat
     3721 cggcgtagtc gcgcacgaag tcgtccgaga ccgcgccggc gaagcgatta cgccggctta
     3781 tgggatcgag ccgcaacaag tggtcgcggt aggggtcggc ctcgccaatc cacaatttcc
     3841 ggatcagccc gccgcggggt agcggatcgt gcatgagcct ctccctcgag atggttacga
     3901 atcgaaccaa ttcatattgc agcgcactaa aggccggaca agggcatccc gctccggagt
     3961 gatcacaatt aagttaatga tttttccaga taaaatagca tggctggcat gcgcgacatt
     4021 tgttcggtcg gacgagaact gcacaatttt tccgcactgc actatgacag cttgatgtca
     4081 cttcctaatt ggcccgcccc aatggccagc gcgcgatcaa gccagctatg cccccgccga
     4141 gaaatcggat gacttggctg cgcgccgcca ggtcgtgcgt tccggtccga gcgagccccc
     4201 acgtccgcaa gcgcttggtc tgctcgaaag cggcttgcgg ccgacg
//
LOCUS       DATCWM010000423         4400 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_305547, whole genome shotgun sequence.
ACCESSION   DATCWM010000423 DATCWM010000000
VERSION     DATCWM010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4400)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4400)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4400
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_305547"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..173
                     /locus_tag="VIQ50_08210"
     CDS             <1..173
                     /locus_tag="VIQ50_08210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007591803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Isoquinoline 1-oxidoreductase subunit"
                     /protein_id="HEY9360401.1"
                     /translation="RNGGRSLEELVHHIGTDALVGWAWAPGFGRKPAPGTQKEAGALV
                     EAWVKTGAVCPH"
     gene            complement(261..1367)
                     /locus_tag="VIQ50_08215"
     CDS             complement(261..1367)
                     /locus_tag="VIQ50_08215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014892650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360402.1"
                     /translation="MLKHSLLKRYACATTALLLLGLGSTATAQNAPSFMGPIEGRTTS
                     SPAETATKNVLALNSMMFELYDDAAKVFQANILKNHPVILGLFTGAGGRFILYRPGMA
                     PLEAPSVPIVYQLLKSVGHSTMALTEIVAPYLDNPDNQSWRSAMSAYRARMKAAVDGL
                     DATPMPADWRDNSRVILENNIAFMDDCLTKGSISSAALQEFAKKQSPLLKRNIAWAAQ
                     TQVGHWMKVIGDWKTMLGSDWDKAYAASNTIYVARQNNILFSVLAQYFGPEAINHRLM
                     LIETISFTSTPDDMLTSLTRIIADRSVGALFFGNYYLMDYELMGGDARAAVIAEDEKR
                     GMKPFLPPAVPFGSKQWPTLITPGPGPTSLADVP"
     gene            complement(1446..2408)
                     /locus_tag="VIQ50_08220"
     CDS             complement(1446..2408)
                     /locus_tag="VIQ50_08220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012631247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9360403.1"
                     /translation="MQRVAKAGRDQALRRHSEAIAFLVMASLLVLAPMFAYPVFLMKA
                     LCFALFACAFNLLIGYVGLLSFGHALFFGWASYISAHAAKVWGLPPELAILSGAATAA
                     GLGAIVGALAIRRQGIYFAMITLALAQMMYFFAVQAPFTHGEDGIQAVPRGKLFGLID
                     LADQTNMYVTVLVIFLGCFLLIYRIINSPFGEVLKAIRENEPRAISLGYRSERYKLVA
                     FVLSATFAGVAGATKALVFQLASLTDVDWPMSGEVILMTLVGGLGTLFGPVAGAFFVV
                     TLENYLTTIGQWVFVVQGVIFVVCVLLFRRGIIGELAQVLRVKL"
     gene            complement(2410..3297)
                     /locus_tag="VIQ50_08225"
     CDS             complement(2410..3297)
                     /locus_tag="VIQ50_08225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9360404.1"
                     /translation="MFELFGISSQALFGQLLIGLINGSFYALLSLGLAVIFGMLNIIN
                     FAHGAQYMLGAFAAYFLLQYAGLGYWWAIVLAPIVVGITGIIIERLFLQWLYKLDHLY
                     GLLLTFGLALIFEGTFRNFFGSSGLPYSVPPALQGGQNLGFMFLPNYRGWVVVFSLAV
                     CLTTWFVIERTKLGSYLRAATENPALVRAFGINVPRMITLTYGFGVALAALAGVMAAP
                     IYNVSPQMGANLIIVVFAVVVIGGMGSIMGAIVTGFGLGLIEGLTKVFFPEASNTVIF
                     IIMAIVLLIRPAGLFGRSA"
     gene            complement(3366..>4400)
                     /locus_tag="VIQ50_08230"
     CDS             complement(3366..>4400)
                     /locus_tag="VIQ50_08230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9360405.1"
                     /translation="GAAAKGMKVEIIFADHQNKADVGSNIARQWYDSDKVDVIADVPT
                     SSVALAVNEIVRDKNKVFLVSGAAASDLTGPKCTPNTIHWTYDTWALANGTGKAIVKT
                     GGDTWFFLTADYAFGHALERDTAAVVEKNGGKVVGRVRHPFPGTDFSSFLLQAQASKA
                     KIIGLANAGSDTINSIKQASEFGITQSGQNLAALLAFITDVHALGLQTAQGLIMTEAW
                     YWDLNDANREFTKKFAPQFKGVHPTMVHAGVYSAVTHYLKAVEALKSDADGKAVVAKM
                     KEMPTDDKLFGKGEVRADGRKIHPMYLFEVKKPAESKAPWDYYKLRATIPADEAFRPL
                     ADGGCPLVKS"
BASE COUNT          878 a         1358 c         1382 g          782 t
ORIGIN      
        1 cgcgcaatgg cggccgctcc ttggaagaac tagtccatca catcggcacc gatgctctgg
       61 ttggttgggc ctgggcgccc ggatttggtc gcaagcctgc tcccggcacg cagaaggaag
      121 cgggagcgct cgtcgaagcg tgggtgaaaa cgggggctgt gtgtccgcac tagatcagtg
      181 ggatagcagc ccgttccccg ttccccgatc cacgggcgct cgccgggcgc cgcgcatacc
      241 gagtcgatcg ttcagacttc tcaaggaaca tcggccaatg aggtggggcc aggtcccggc
      301 gtaatcagcg tcggccattg tttcgagccg aacggcacgg ccggcggaag gaacggcttc
      361 atcccgcgct tctcgtcctc cgcgatgacc gcggcgcgcg cgtcgccacc catcagctcg
      421 tagtccatca ggtaataatt gccgaagaac agcgcaccga ccgagcggtc ggcgatgatg
      481 cgggtgagcg aggtgagcat gtcatccggc gtcgatgtga acgagatcgt ctcgatcagc
      541 atcagcctgt ggttgatggc ctccggcccg aaatattgcg ccagcacgct gaataggatg
      601 ttgttttgcc gcgccacata gatggtgttg ctggcggcgt aggccttgtc ccaatcgctg
      661 cccagcatcg tcttccagtc gccgatcacc ttcatccagt gaccgacttg agtttgcgcc
      721 gcccaggcga tgttgcgctt gagcaggggg ctttgtttct tcgcaaattc ctgcagcgca
      781 gccgacgaga tcgagccttt cgtaaggcag tcgtccatga aagcgatgtt gttctcgagg
      841 atgacgcggc tattgtcccg ccagtccgcc ggcatgggag tggcgtcgag gccgtcgacc
      901 gcggctttca tgcgcgcgcg ataggcggac atcgcgctgc gccaggactg gttgtcggga
      961 ttgtcgagat aaggcgccac gatctcggtc agcgccatcg tgctgtggcc gaccgatttg
     1021 agcagctgat agacgatggg caccgagggc gcctcgagcg gagccatgcc cggccgataa
     1081 aggatgaagc ggcccccggc gcccgtgaac aatcccagga tcaccggatg gttcttgaga
     1141 atattcgcct gaaacacctt cgccgcgtcg tcatagagct cgaacatcat ggaattgagc
     1201 gccagaacgt ttttcgtcgc ggtctcggcg ggactagaag tggtgcggcc ctcgatcggg
     1261 cccataaacg acggcgcgtt ttgcgcggtc gcggtcgagc ccaggcccaa cagcagcagc
     1321 gccgtcgtcg cacaggcgta gcgtttcagc agcgagtgct taagcatgtt ccctctcagc
     1381 aacacgatcg tcgccccctc tacctggaac tgcgccagcg gtccagcata cgcgctcaga
     1441 gggcgtcaaa gcttgacgcg cagaacttga gccagctcac cgatgatgcc gcggcggaac
     1501 agtaggacgc agacgacgaa aatcactcct tgcacgacga atacccattg tccgatcgtg
     1561 gtcaagtagt tctcgagcgt gaccacgaag aaggcccccg cgaccggccc gaacagggtt
     1621 ccgagcccgc ccaccaaggt catgaggatg acttcgcccg acatcggcca gtcgacgtcg
     1681 gtcaacgagg cgagctgaaa caccagcgcc ttggtcgccc ccgccacgcc ggcaaacgtc
     1741 gccgacagca cgaaggccac gagcttgtag cgctcgctcc tgtagccgag cgagatcgcg
     1801 cgcggctcgt tctcgcgtat cgccttgagc acttcgccga acggcgaatt gatgatgcga
     1861 tagatcagca gaaagcagcc gagaaagatc accagcaccg tgacgtacat gttggtttgg
     1921 tcggcgagat cgatgagccc gaacagcttt ccgcgcggga ccgcctggat gccgtcctcg
     1981 ccgtgcgtga acggcgcttg cacggcgaag aagtacatca tctgcgccaa ggcgagcgtg
     2041 atcatggcga aatagatgcc ttgccggcgg atggcgagcg caccgacgat cgcgccgagc
     2101 ccggcggcgg tggcggctcc cgacaggatg gcaagttccg gcgggagccc ccaaactttt
     2161 gccgcgtgtg cgctgatata gctcgcccag ccgaagaaca gcgcatggcc aaacgaaagc
     2221 agcccgacgt atccgatcag caggttgaag gcgcacgcga acagcgcgaa gcacagcgcc
     2281 ttcatcagaa agacgggata ggcgaacatc ggcgcgagaa cgagcagtga ggccatgacc
     2341 aggaaggcaa tcgcctcgct gtgccggcgc agcgcctgat cgcggcccgc cttggcgacg
     2401 cgctgcacgc taagcgctcc ttccgaacag gccggctggc cgtatcaaaa gcacgatcgc
     2461 catgatgatg aatatcaccg tgttggatgc ttccgggaag aacaccttgg tgagcccctc
     2521 gatcaggccc aatccgaacc cagtcacgat cgcgcccatg atcgatccca tgccgccgat
     2581 cactacgacg gcgaacacca cgatgatgag gttcgcgccc atttgcgggc tcacattgta
     2641 gatcggcgcc gccatcacgc ctgcgagcgc ggccagcgcg acgccgaagc cgtaggtcag
     2701 cgtgatcatg cgcggcacgt tgatgccgaa tgcgcgcacg agggccgggt tttcagtcgc
     2761 ggcgcgcaga tacgagccaa gcttcgtgcg ctcgatcacg aaccaggtcg tcaggcatac
     2821 ggcgagcgaa aaaaccacca cccagccgcg gtagttcggc aagaacatga agcccaggtt
     2881 ctgcccgcct tgcagcgccg gcggcaccga atagggcagg cccgaggagc cgaaaaagtt
     2941 gcggaaggtg ccttcgaaga tgagcgcgag cccgaaggta agtaagagcc cgtagagatg
     3001 gtcgagctta tagagccatt gcagaaacag ccgctcgatg atgatcccgg ttatcccgac
     3061 gacgatcggc gcgaggacga tggcccacca gtaacccagt cccgcgtatt gcaggagaaa
     3121 gtacgcggcg aaggcgccca acatatactg ggcgccgtgc gcgaagttga tgatgttgag
     3181 catgccgaaa ataacggcga ggcccaggct gagcagcgca tagaacgagc cgttgataag
     3241 cccgatcagc agctgcccga acagcgcctg cgaactgatg ccgaacagtt cgaacatggc
     3301 ggatcacatc gttgggcagg gaacggaaga attccattcc ctgcctgctc gccgcaatcg
     3361 atcaatcagc tcttcaccaa cgggcagccg ccgtcggcca gcggccggaa cgcttcgtcg
     3421 gccgggatgg tggcgcgcag cttatagtaa tcccaggggg ccttggattc cgccggcttc
     3481 ttcacctcga acagatacat cgggtggatc ttgcggccgt cggcgcgcac ctctcccttg
     3541 ccgaacagtt tgtcgtcggt cggcatctcc ttcatcttgg caacgacggc cttgccgtcg
     3601 gcatcgctct tgagcgcctc gaccgccttg agatagtgcg tgaccgccga atacacgccg
     3661 gcgtgcacca tggtcggatg cacgcccttg aactgcggcg cgaacttctt cgtaaactcg
     3721 cgattcgcgt cgttgaggtc ccaataccac gcttcggtca tgatcaggcc ctgcgccgtc
     3781 tgcaagccca gcgcatgcac gtcggtgata aacgccagca acgctgcgag gttctggccg
     3841 ctttgggtga tgccgaactc ggaggcctgt ttgatcgagt tgatcgtgtc gctgccggca
     3901 ttggcgagcc cgatgatctt cgccttcgag gcttgcgcct gcagcaagaa cgacgagaag
     3961 tccgtgccgg ggaagggatg gcgcactcgg cccacaacct tgccgccgtt cttttcgacg
     4021 acggcggcgg tgtcacgctc gagcgcgtgg ccgaaagcat agtcggcggt gaggaagaac
     4081 caagtatcgc cgccggtctt tacgatcgct tttccggttc cgttggcgag cgcccaggtg
     4141 tcgtaggtcc agtggatcgt gttgggggtg catttcgggc cggtcagatc agaggccgcc
     4201 gcgccggaga cgagaaatac cttgttcttg tcgcgtacga tctcgttcac ggcgagcgca
     4261 accgaggacg tcggcacgtc ggcgatgacg tccaccttgt ccgagtcgta ccactgccgc
     4321 gcgatattcg acccgacgtc ggccttgttc tgatggtcgg cgaagatgat ctcgaccttc
     4381 atgcctttag cggcggcgcc
//
LOCUS       DATCWM010000424         3066 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_380939, whole genome shotgun sequence.
ACCESSION   DATCWM010000424 DATCWM010000000
VERSION     DATCWM010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3066
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_380939"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..331
                     /locus_tag="VIQ50_08235"
     CDS             <1..331
                     /locus_tag="VIQ50_08235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HEY9360406.1"
                     /translation="VTTWKVMGRTQAVAAPSDSSRLAWLALEPVTGRTHQLRVHCAAM
                     GWPIVGDSIYGAAPRMQTPGLQLHAREIVVPLYNNRAPIRVSAPVPPHMQQLLRACGW
                     RGEASAE"
     gene            complement(356..982)
                     /locus_tag="VIQ50_08240"
     CDS             complement(356..982)
                     /locus_tag="VIQ50_08240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008837966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEY9360407.1"
                     /translation="MSEFRDHIVTSVEALGRIYGEPYGPSIAKEADRITTQYQAFIEA
                     APFFALATAGPDGLDCSPRGDAPGFVRVHDEKTLLVPDRRGNNRIDSLRNILHDPRVA
                     LLFLIPGCGETIRVNGRAAISTDPALAQSFLVDGKSPRAVLVVSVERVFYQCAKAIVR
                     SKLWDPSRHIDRKSLPSNGTILAELTEGRLGGEAHDREAPARLKATLY"
     gene            complement(1036..2307)
                     /gene="mtaB"
                     /locus_tag="VIQ50_08245"
     CDS             complement(1036..2307)
                     /gene="mtaB"
                     /locus_tag="VIQ50_08245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase MtaB"
                     /protein_id="HEY9360408.1"
                     /translation="MSVDVVTFGCRLNAYEGEVIRRQAQGAGLADAVIVNTCAVTEEA
                     VRQSRQAIRSLKRQRPGTPIVVTGCAAQVAPESFAQMAEVALVLGNQEKISAEVWRQH
                     GASLARGPFGLTAEEKIAVNDIMTVRQTAVHLIDGLEGRARAFVQVQNGCDHRCTFCI
                     IPYGRGNSRSVPMGEVITQMRSLCARGYREIVLTGVDLTSYGANLPGAPKLGTLVKQI
                     FKHVPEILRLRLSSIDSVEADHELLDAFGGEARLMPHLHLSLQAGDDLILKRMKRRHL
                     RADAIAFCQTVRRLRPDVVFGADVIAGFPTETEEMFARSLDLVDACGLTHLHVFPFSP
                     RSGTPAARMPQTKREVIKERARRLREKGQAALRRHLEAQVGARRQVLVESPEVGRTEH
                     FTRARLAAPMQPGLILDVTVAGHDGRQLLTA"
     gene            complement(2304..>3066)
                     /gene="dapF"
                     /locus_tag="VIQ50_08250"
     CDS             complement(2304..>3066)
                     /gene="dapF"
                     /locus_tag="VIQ50_08250"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HEY9360409.1"
                     /translation="AAPNGVPYDQLMALHAPRTPGTDGYLRIYNNDGSEAGACGNGMR
                     CVAELLFKETEKSALTLETTAGLLSCWKGERPSISTVDMGKPHFAWNEIPLAKKFDDT
                     RAIDLGTRPIDEPTLQAPSALSMGNPHAIFWVDDVGAYDLGKIGPSLETHPIFPQRAN
                     ISLAQVVSRARLIVRTWERGAGLTKACGSAACAAAVAAARLGLVERAVTVSLPGGELR
                     IEWRAQDDHVLMTGPVAYEYEGKFDPALFKVRANR"
BASE COUNT          547 a         1005 c          986 g          528 t
ORIGIN      
        1 ggtaacaacg tggaaggtga tgggacggac gcaggccgtc gccgcgccga gcgattcgtc
       61 tcgccttgcc tggcttgcgc tcgagcccgt caccggccgc acgcatcagc ttcgcgtgca
      121 ttgcgccgcc atgggatggc ccatcgtcgg cgacagcatt tatggagccg ccccgcgaat
      181 gcagacaccc ggcctgcagc tgcacgcgcg cgaaatcgtc gtgccgcttt acaacaatcg
      241 cgcgccgatc cgcgttagcg cgcccgtgcc tccgcacatg cagcagttgc tgcgcgcatg
      301 cggatggcgg ggcgaggcgt cggccgaata actccgcgcg tgacgcggac gccgttcaat
      361 aaagcgtcgc cttcaggcgc gccggcgctt cacgatcgtg tgcctccccg ccgagtcggc
      421 cctcggtcaa ctcggccagg atcgtgccgt tactcggcag gctcttgcgg tcgatgtggc
      481 gcgacggatc ccacagcttg gagcgcacga tcgctttcgc gcactgatag aacacgcgct
      541 cgacggaaac aacgagcacg gcgcgcgggc tcttgccgtc gacgagaaag ctttgcgcca
      601 gcgccggatc ggtcgaaatt gcagcgcggc cgttgacgcg gatggtctcg ccgcaacctg
      661 gaataaggaa caggagcgca acccgcgggt cgtgcaaaat gttgcgcaga ctatcgatgc
      721 ggttgttacc gcgccggtcg ggaaccagca gggtcttctc gtcgtggacc cgcacgaagc
      781 cgggcgcatc gccgcgtggg gagcaatcaa ggccgtcagg gcccgcggtg gcgagggcga
      841 agaacggcgc cgcctcgatg aaggcttggt attgggtggt gatacggtcg gcctccttgg
      901 cgatcgacgg accatagggc tcgccataaa tgcgcccaag cgcctcgacg ctggtgacga
      961 tgtgatcgcg aaattccgac atgccgggct cccgaacgaa ccggcggatc gtatcacgtt
     1021 cctctcgcat ccgtcctacg ccgtcaggag ttgccggccg tcatggccgg cgacggtgac
     1081 gtcgaggatc aacccgggct gcatgggcgc cgcaaggcgt gcccgggtga aatgctcggt
     1141 gcgcccgacc tcgggagatt cgaccaacac ctggcgcctg gcgccaactt gcgcctcgag
     1201 gtgacggcgc agcgctgctt gccctttttc gcgcagccgg cgagcacgct ccttgataac
     1261 ctcgcgcttg gtctgcggca tgcgcgcggc gggcgtgccg gaccggggcg agaacggaaa
     1321 cacgtggaga tgagtgagcc cgcatgcgtc gacgagatca agcgacctgg caaacatctc
     1381 ctcggtctcg gtggggaatc cggcaatgac atcggcgccg aacacgacat cgggccgcag
     1441 tcgccgcacc gtctgacaga aggcgatcgc gtcggcgcgc aaatggcggc gcttcatgcg
     1501 cttgagaata agatcgtccc ccgcctgaag cgagagatgc agatgcggca ttagccgcgc
     1561 ctcgcccccg aatgcatcga ggagttcatg atcggcctcc accgaatcga tcgacgagag
     1621 gcgcagccgc aagatctccg ggacatgttt gaaaatctgc ttcaccaatg tgccgagctt
     1681 gggcgcaccc ggaagattcg cgccatagct agtgagatcg acgccggtga gcacgatttc
     1741 gcgatagccg cgcgcgcaga ggctgcgcat ttgagtgatc acctctccca tcggcaccga
     1801 gcgcgaattg ccgcggccat agggaatgat gcagaaggtg cagcggtgat cgcagccgtt
     1861 ctgcacctgt acgaaggcgc gcgcccggcc ctccaggcca tcgatcagat gcactgccgt
     1921 ttgcctcacg gtcatgatgt cgttgaccgc gattttctcc tcggcagtga gaccgaaggg
     1981 tcctcgcgcc aaactggcgc catgctggcg ccagacctcg gcgctgattt tctcctggtt
     2041 gcccaggacc aacgcgactt ctgccatctg cgcgaagctc tcgggtgcga cttgcgcggc
     2101 gcagccggtc accacgatcg gcgtgccggg acgctgccgc ttgaggctgc ggatggcttg
     2161 gcgcgactgc cgtacggcct cttccgtcac cgcacaggta ttgacaatga cggcatcggc
     2221 cagaccggca ccttgcgcct gacggcggat tacctctccc tcataggcat tgagccggca
     2281 gccgaaggtg acgacatcga cactcatcgg ttcgccctca ccttgaatag ggcgggatcg
     2341 aattttccct cgtattcgta ggcaaccggg ccggtcatca acacgtgatc atcctgcgcc
     2401 cgccactcga tccgcagctc cccgccaggc agtgacaccg tcaccgcgcg ttcgacgaga
     2461 cccagccgcg ctgccgcgac cgccgccgcg caagcagccg acccgcacgc cttggtcagc
     2521 cccgcgccgc gctcccacgt acgcacaatg agccgcgcgc gcgagaccac ttgcgcgagc
     2581 gaaatgttgg ctcgctgggg aaatatcgga tgggtctcca gtgacggccc gatcttgccg
     2641 agatcgtagg cgccgacgtc gtcgacccag aagatagcgt gcggattgcc catgctgagg
     2701 gcggaaggcg cctgcagggt cggctcgtcg atcggccgcg ttcccagatc gatcgcgcgg
     2761 gtatcatcga atttcttggc aagcgggatc tcgttccagg cgaaatgcgg tttgcccata
     2821 tcgacggtcg aaatcgacgg ccgctcgccc ttccagcagc tcagcaatcc ggccgtcgtt
     2881 tccaaggtca aagcgctctt ttcggtttcc ttgaacagca actcggcaac gcagcgcatg
     2941 ccgttgccgc aggcgccagc ctccgagccg tcgttgttgt aaattcgcag atagccatcg
     3001 gtgccggggg tacgcggcgc atgcagcgcc atcaattgat cgtagggcac gccgttgggc
     3061 gcggcg
//
LOCUS       DATCWM010000425         4192 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_8495, whole genome shotgun sequence.
ACCESSION   DATCWM010000425 DATCWM010000000
VERSION     DATCWM010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4192
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8495"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..323
                     /locus_tag="VIQ50_08255"
     CDS             <1..323
                     /locus_tag="VIQ50_08255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphopantetheine adenylyltransferase"
                     /protein_id="HEY9360410.1"
                     /translation="RASGCDFACITFADLVVAAAQREGATLLIRGLRSASDFDYEMEM
                     AGMNAAMAPAVQTVFLPAAPNVRPITATLVRQIASMGGDVSPFVPPPVAARLKAKFAG
                     KSGR"
     gene            338..880
                     /locus_tag="VIQ50_08260"
     CDS             338..880
                     /locus_tag="VIQ50_08260"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEY9360411.1"
                     /translation="MIRLLACFALLIGMAPALAQVQPGADPQNTLLIDTKYGRIVIKL
                     RNDIAPKHVERIKLLAREKYYDNVPFHRVIAGFMAQTGDGARGDGTGGSKYPNLPAEF
                     SNVPFKRGVVGMARASDPNSANSQFFIMYADGAFLNGKYTVVGEVLSGMEVVDKIKKG
                     EPVVDPDRMIRVQVAADAKS"
     gene            890..1462
                     /locus_tag="VIQ50_08265"
     CDS             890..1462
                     /locus_tag="VIQ50_08265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360412.1"
                     /translation="MHTGHALTGLGLLATALVGGVEPAVAFCSAFTTHPCFSAVCSAF
                     ANRYCIPHPDYWIGQDLRLTIESASAGDGPAGGAPAQDSSGEHKLDTLHAIFDALRAC
                     WIPPAKEEARPGMQMSVRFAFKRSGNIIATPRVTYVSHGASPETREVYLHAISAALER
                     CTPLHLSEGLGNAVAGRPIAIRFVDNREQP"
     gene            1462..1872
                     /locus_tag="VIQ50_08270"
     CDS             1462..1872
                     /locus_tag="VIQ50_08270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360413.1"
                     /translation="MGRLRVAGWALAFTALVSGAGAQTKQPPVNTLSDVMAALRACWV
                     PPPLDQSRTGMQITVQMSFRRNGELLGQPRITFESPGASDDERLAYRVAVAKMLKRCA
                     PLPFTDALGNALAGRPFTIRFTDERKFKQAENSP"
     gene            1869..2330
                     /locus_tag="VIQ50_08275"
     CDS             1869..2330
                     /locus_tag="VIQ50_08275"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEY9360414.1"
                     /translation="MTNAENTLTLDTTKGKVVIQMRPDLAPGHVARIKELVREGFYDG
                     IVFHRVIDGFMAQTGCPHGTGTGGSGKKLKAEFNKEPHRRGTVSMARAQSPDSGDSQF
                     FICFADAPFLDGKYTVWGQVTEGMGNVDKIKRGEPVADPDRIISAKMAENA"
     gene            2967..4040
                     /gene="queA"
                     /locus_tag="VIQ50_08280"
     CDS             2967..4040
                     /gene="queA"
                     /locus_tag="VIQ50_08280"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HEY9360415.1"
                     /translation="MRTALFDFELPPDRIALRPVSPRDAARLLVVRPGQVPELEDRGM
                     RDLPDLLRAGDALVVNDTKVIAARLRGRRIGRGVVEPAIEATLHQRLDGSRWRAFVKP
                     AKRLAPGDVVRFGDEGKVCFLGQLDATVEEKAGGGEVTLAFAFHGPVLDQALDERGAM
                     PLPPYIRRDPDERDRTDYQTIFAREEGSVAAPTAGLHFTDALTARLLERGITLHKVTL
                     HVGAGTFLPVKSDDTAAHRMHAEQGGVNAETADALNRVRRAGGRIVAVGSTSLRLLES
                     ASGDDGVIRPFAGETALFITPGYRFRTVDVMLSNFHLPRSTLFMLVAAFCGLEVMRRA
                     YAHAIRASYRFYSYGDACLLFRP"
BASE COUNT          741 a         1313 c         1365 g          773 t
ORIGIN      
        1 cgcgcgcgag tggctgcgat ttcgcttgca tcacgttcgc cgatctcgtc gtcgctgcgg
       61 cacagcgcga gggcgcgaca ctcctgatcc gcgggctgcg cagcgcgagt gatttcgatt
      121 atgagatgga aatggcgggc atgaatgcgg ccatggcgcc cgctgtgcag accgtttttc
      181 tgccggccgc accgaacgtt cgcccgatca ccgccacact ggtacggcag atcgcatcca
      241 tgggcgggga cgtatcgccg ttcgttccgc cgccggtcgc cgcccgcctg aaagcaaagt
      301 tcgccggcaa gtccggccgt tgagcccggg agattccatg atccgtctgc tcgcatgttt
      361 tgccctcctg atcggtatgg cgcccgccct cgcgcaagtg cagcctggcg ccgatccgca
      421 gaacacgctt ctgatcgaca cgaaatacgg ccgcatcgtc atcaagttgc gaaatgacat
      481 cgcccccaag cacgtcgagc gcatcaagct tctcgcgcgc gagaaatatt atgataacgt
      541 gccgtttcac cgtgtgattg ccggcttcat ggcgcagacc ggcgacgggg cgcgcggcga
      601 cggcaccggc ggctcgaaat atcccaacct tccggccgaa ttctccaatg tgccgttcaa
      661 gcgtggcgtg gtcgggatgg cgcgcgccag cgatccgaac tcggccaact cccagttttt
      721 catcatgtat gcggatggcg cgttcctcaa cggcaagtac accgtcgtcg gggaagtgct
      781 ctccggcatg gaagtggtcg acaagatcaa gaagggcgag ccggtggtcg atcccgaccg
      841 catgatccgc gtgcaggtcg cggccgatgc caagtcatga ggagggtcgg tgcacaccgg
      901 ccatgcgttg accggacttg gcctcttggc cacggcgctg gtgggcggcg ttgagccggc
      961 ggttgccttc tgcagcgcct tcacgacgca tccatgcttt tcggccgtgt gcagcgcctt
     1021 tgccaaccgc tactgtatcc ctcaccccga ctattggatc gggcaggatc tccgattgac
     1081 catagagagc gcgtccgcgg gcgatgggcc ggcgggcggc gctcctgccc aggactcgag
     1141 cggcgagcac aagctcgata cgctgcacgc catattcgac gcgctccgcg cttgctggat
     1201 tccgcccgcg aaggaggagg ctcggcccgg catgcagatg tcggtgcggt ttgccttcaa
     1261 gcgcagcggc aacatcatcg ccacgccgcg ggtgacctat gtcagccacg gcgcttcccc
     1321 ggaaacccga gaggtctacc tgcacgcgat ttccgcggcg ctcgaacgct gcacgccact
     1381 gcacttgagc gaaggattgg gcaacgcagt cgcaggtcgg ccgattgcga tccgttttgt
     1441 cgacaatcgg gagcagccgt gatgggacgg ttgcgtgttg ccggctgggc gttggccttc
     1501 accgcactgg tgagcggggc aggcgcgcaa accaaacaac cgccggtcaa cacgctgagc
     1561 gacgtgatgg cggcgctgcg agcgtgttgg gtcccgccgc cccttgatca gtcgcgcacg
     1621 ggcatgcaaa tcacggtgca gatgagcttc cgccgcaacg gcgaacttct cggccagccg
     1681 agaatcacat tcgaatcccc cggcgcctcg gatgatgaac ggcttgccta tcgagttgca
     1741 gtggcgaaga tgctcaagcg ctgcgcgcct ctgccgttca ccgacgcgct cgggaacgca
     1801 ttggccggcc ggccgttcac catcaggttc accgatgagc gcaagttcaa acaagcagag
     1861 aactccccat gaccaacgcc gagaatacgc tgacgctcga caccaccaaa ggaaaggtcg
     1921 tcattcagat gcggccggac cttgcacccg gccatgtcgc ccgcatcaag gagttggtgc
     1981 gcgagggctt ctacgacggc atcgtgtttc atcgcgtcat tgacggcttc atggcgcaga
     2041 ccggctgccc gcacggcacc ggcaccggcg gttccggcaa gaagctcaag gcggagttca
     2101 acaaagagcc gcaccgccgg ggcaccgtct cgatggcgcg ggcgcaatct ccggattccg
     2161 gcgacagtca gttcttcatc tgctttgcgg atgcgccgtt tcttgacggc aagtacacgg
     2221 tctggggcca agtgaccgaa ggcatgggaa acgtggacaa gatcaagcgt ggcgagccgg
     2281 tggcggaccc cgatcgcatc atctcagcca agatggcgga gaacgcgtaa tcgtgtgagg
     2341 tcgggtcgcg acggtgttgt ttcaccacta gaagtaagcc gaagcggcgc ggcgatcgcc
     2401 cgtggccgcc ggcaaaaagc tcaaaggaaa gccttgcgtt gcgggcgcgg ctcggcgtca
     2461 cacacccaag cttccttggc aaaccattca tgctcggtcc gacaaatcgg gcagtggacc
     2521 cgtgcgaaaa agaccggcat ggcctcgaaa ctcttgcgat ccgaggtcaa accggtgggg
     2581 atgtcacgtc cggtctgggg gcatctcacc atgacggctc ccattggcct ctctcctggc
     2641 ttttgtcgtt gcggccactc gatacgctcc gcttgtgaag atcgtttgac gcaaccgcga
     2701 caagagcatg ggaccctcgc aaatcatcga gaggatcttg tgcatgcatg ggtgtcattc
     2761 catcaagaaa atgtgcgcgg gtcgaagggg ccgcatccga gcgagttgac gccgttcggc
     2821 gaaggcgagt cggcacggta tgaccctacg gctccttcgc cgcgttgcag caaaaactcg
     2881 cggcatgcgg aggacctgca cagatgcccg cttgaggttt tggcccgggc gatgacctgc
     2941 ggcgcgtgcg cttgtatgag aaggccatgc gcaccgcctt gttcgacttc gagctgccgc
     3001 ccgatcgcat cgcgttgcgt cccgtttcgc cgcgggatgc ggcgcggctg ctggtcgtgc
     3061 gtcccggaca ggtcccggaa ctggaggatc gcggcatgcg cgatctcccc gacctgcttc
     3121 gcgcgggcga cgcgttggtg gtcaatgaca ctaaggtgat tgcggcccgc ctacgcgggc
     3181 ggcgcatcgg ccgcggcgtc gtggagcccg ccatcgaggc gacgctgcac cagcgcctcg
     3241 acggctcgcg ctggcgcgcg ttcgtgaagc cggccaagcg cctggctcct ggcgacgtgg
     3301 tgcgcttcgg ggacgaaggg aaagtctgct ttctcggcca gctcgatgcc acggtcgagg
     3361 agaaggctgg gggcggggag gtcacgttgg cctttgcctt tcatggccct gtgctcgacc
     3421 aggcgctcga cgaacgcggc gccatgccac tgccgcccta tattcggcgt gatccggatg
     3481 agcgcgatcg aaccgattac cagaccatat tcgcgcgaga ggagggctcg gtcgcagcgc
     3541 cgaccgcggg gctgcacttc accgatgcgc tcacggcacg cctgctggag cgggggatta
     3601 ccttgcacaa ggtcacgctg catgtgggcg cggggacgtt tcttccggtc aagtcggacg
     3661 acaccgctgc gcatcgcatg catgcggagc aaggcggcgt caacgcggag accgcggatg
     3721 cgctcaaccg ggtgcggcgg gcgggggggc gcatcgtcgc ggtcggctcg acttcgctgc
     3781 ggcttcttga aagcgcgagt ggcgacgatg gcgtcatccg cccctttgcg ggcgagactg
     3841 ccctattcat cacgccgggc tatcgtttcc ggacggttga cgtgatgttg agcaatttcc
     3901 acttgccgcg ctccacgctg ttcatgctgg tcgcagcgtt ttgcgggctc gaggtgatga
     3961 ggcgcgccta cgcccacgcg atccgcgcga gctatcgatt ctattcctac ggcgacgcgt
     4021 gcctgctgtt tcggccctga ttagtccgag agggattatt acgccgcccg gcaggcaacg
     4081 gcggacttgt catcgtatga cgcatgattt aatagaggca ctctaaacat cgattctgat
     4141 gtgttagaca tgataactgg cgcacagatg cgggccgcaa gagccctgct gg
//
LOCUS       DATCWM010000426         2094 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_348704, whole genome shotgun sequence.
ACCESSION   DATCWM010000426 DATCWM010000000
VERSION     DATCWM010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2094)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2094)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2094
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_348704"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..427)
                     /locus_tag="VIQ50_08285"
     CDS             complement(<1..427)
                     /locus_tag="VIQ50_08285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016840413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon monoxide dehydrogenase subunit G"
                     /protein_id="HEY9360416.1"
                     /translation="MAMTMNGQVQLPASREVVWAKLNDPEVLKSCIPGSEQLDRIAEN
                     EFQAVATVKVGPVKARWKGKVKLSDLDPPNSYRISGEGEGGVAGFAKGGATVALSAQD
                     GGTLLTYDVEAQIGGKLAQLGQRLINGTAKKLADEFFANF"
     gene            592..1386
                     /gene="pcaD"
                     /locus_tag="VIQ50_08290"
     CDS             592..1386
                     /gene="pcaD"
                     /locus_tag="VIQ50_08290"
                     /EC_number="3.1.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047570 - 3-oxoadipate enol-lactonase
                     activity [Evidence IEA];
                     GO_process: GO:0042952 - beta-ketoadipate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoadipate enol-lactonase"
                     /protein_id="HEY9360417.1"
                     /translation="MPIVSADGCPIHVEVEGPERAPVLMLSNSLGTTLNMWDRQVAPF
                     TQHFRLVRYDRRGHGRSGVPKGPYTMERLGRDVLAVLDALDIRRINWCGLSMGGMVGQ
                     WLGANAPERIERLVLTNTSSHFADKRAWNDRLKLVREKGIAAFAAPNMERWFTKQFRE
                     RAPETVTWLREMFAATPLDGYLACGEAVRDMDHRDLLPKIKAPTLVVAGKYDPATPPE
                     ANEYIKNHIPGARYTVLEAAHISNVEQPDAYTNTVLGFLLDRSKPQ"
     gene            complement(1392..>2094)
                     /locus_tag="VIQ50_08295"
     CDS             complement(1392..>2094)
                     /locus_tag="VIQ50_08295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010914538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEY9360418.1"
                     /translation="AEAARRAAQPAKPTFAMGFLTGQEVDWLPRATSILRDELLNIEI
                     KVSSDHSTMLADDLQRGKLDIAFLRVEQQKPDLAYKLVAKEPIVVILPSDHPLAEHKA
                     IDPHDLAGEKFIGISNVPRVLRSVVGDYLRRSGIEIVPHLEIDNFAMAVSLVASTRGV
                     ALLPVSAENFLKWSVISRPLKGEAPTIDLVAGYHKANTSPILRTFLSRIDDLTGRISS
                     KARRMSGDRPQRRDD"
BASE COUNT          382 a          658 c          645 g          409 t
ORIGIN      
        1 cgaaattcgc aaaaaactcg tcggccagtt tcttggccgt gccgttgatc aggcgctggc
       61 cgagctgggc gagcttgccg ccgatctgcg cctcaacgtc ataggtgagc agcgtgccgc
      121 cgtcctgcgc ggaaagcgcc acggtggcgc ctcccttggc gaacccggca accccgccct
      181 cgccttcgcc ggagatgcgg tagctgttcg gcggatcgag atcggagagc ttgaccttgc
      241 ccttccagcg cgccttgacc ggcccgactt tgacggtggc gacggcttga aactcgttct
      301 cggcaattcg gtcgagctgc tcgctgcccg gaatgcagct cttgagcact tccgggtcgt
      361 tgagcttggc ccataccacc tcgcggctcg cgggcagttg gacttgccca ttcatggtca
      421 tcgccatcgg ccttctccgt cgttcgcggc gatccgctat catcccggta taaagcgtcg
      481 gcgggtcgcg agcaaagtgc tttcgtcatg cgttgcgcgc tgttgcggga ttggcgcgcc
      541 gcttgccggc agctagaaag tgtcgcgcgc aacatcgccg aaggagtcac catgcccatc
      601 gtcagcgccg acggttgtcc gatccacgtc gaagtcgagg gccccgaacg cgcgcccgta
      661 ctcatgctgt cgaattcgct cggcaccacg ctcaacatgt gggatcgcca ggttgcgccg
      721 ttcacgcagc actttcgcct cgtgcgctat gaccgacgcg gccacggccg ctccggcgtg
      781 cccaaaggcc cctacacgat ggagcgcctc ggccgcgacg tgctcgccgt gctcgacgcg
      841 ctcgacatca ggcggatcaa ctggtgcggg ctgtccatgg gcggcatggt cgggcagtgg
      901 ctcggggcga acgctcccga gcgcatcgaa cggctcgtgc tgacaaatac gtctagccat
      961 tttgccgaca agagggcgtg gaacgatcgc ctcaagctcg tgcgcgaaaa agggattgcg
     1021 gcattcgccg caccgaacat ggagcgctgg ttcaccaagc aattccgcga gcgcgcgccg
     1081 gagaccgtca cctggctgcg ggagatgttc gcggcaacgc ctctcgacgg ctatctcgcc
     1141 tgcggcgaag cggtgcgcga catggatcac cgcgacttgt tgccgaagat taaggcgccg
     1201 acgctggtcg ttgccggcaa gtacgacccg gcgacgccgc ccgaggcgaa cgaatacatc
     1261 aagaaccata ttcccggggc ccggtatacg gttctcgagg cggcccatat ctccaatgtc
     1321 gagcagccgg acgcctacac caatacggtg ctgggattct tgctcgacag gtcgaagcct
     1381 cagtagccaa ttcaatcatc gcggcgctgc ggccgatccc cactcatccg gcgagccttg
     1441 ctggatatcc ggccagtcag gtcatcgatt ctggagagga atgtccgcag gatcggggat
     1501 gtgtttgcct tgtgatatcc ggccactaaa tcgatggtcg gcgcctcgcc ttttagcgga
     1561 cggctgatga cagaccactt caagaagttc tctgcggaga ccggcagcag agcgacaccg
     1621 cgcgtcgacg cgaccagaga aacggccatc gcgaaattgt cgatctcaag gtgcggcacg
     1681 atctctattc cagatcgccg cagataatcg ccgacaacgc tacgcagcac gcgagggacg
     1741 tttgatatcc ctataaattt ttcaccggca agatcgtgcg gatcaatggc cttgtgctcg
     1801 gcgagcggat gatcgctcgg caggatcacg acgatcggct cctttgccac caatttgtat
     1861 gcgagatcgg gcttctgctg ttctacgcgg aggaaggcaa tatcaagctt tccgcgctgc
     1921 aggtcgtctg caagcattgt cgaatggtcg ctcgaaacct tgatttcgat attgagcagt
     1981 tcgtcgcgaa ggatgcttgt ggcacgcggc agccaatcga cctcctgccc ggttaggaag
     2041 cccatggcga aagtcggttt ggcaggttgc gcggctcgcc gcgctgcctc tgcg
//
LOCUS       DATCWM010000427         3209 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_413686, whole genome shotgun sequence.
ACCESSION   DATCWM010000427 DATCWM010000000
VERSION     DATCWM010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3209
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_413686"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..696)
                     /locus_tag="VIQ50_08300"
     CDS             complement(<1..696)
                     /locus_tag="VIQ50_08300"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEY9360419.1"
                     /translation="MGVETRTRFHVVPLGKHIGAEIRGLDLREKPDEEIIRAIYTAWL
                     DHLVIVFPDQRLSQEDLIRVTGYFGELGELSRPAKYFPKGYSRLLPGIMLISNIRENG
                     EPIGALPDGEMMFHHDMIHAEVPSKATLLYSVEIPSAGGNTLFASGYAAYDTLDPAIR
                     DRLEGRKAMHHYNYGSTQKCDSRGTVAFAECTHPVFRTHEDTGRKAVYVNRLMTVGIV
                     DMPAQESDPLLNAV"
     gene            complement(739..1032)
                     /locus_tag="VIQ50_08305"
     CDS             complement(739..1032)
                     /locus_tag="VIQ50_08305"
                     /inference="COORDINATES: protein motif:HMM:NF039404.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6295 family protein"
                     /protein_id="HEY9360420.1"
                     /translation="MCSYIVEKAKLLGSAKGPNGWMRIDTANVYYDHPFHAPLDHALG
                     IDFICEADGGRDRVAVELSAASARELVAKILAALSNGEIEHGKAAHHAVQAAE"
     gene            complement(1051..1818)
                     /locus_tag="VIQ50_08310"
     CDS             complement(1051..1818)
                     /locus_tag="VIQ50_08310"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEY9360421.1"
                     /translation="MTYESMLAETIAFRGHRGDLGEAYYARPLGGPWPGVVLIHHMPG
                     WDEWIKEATRKLAHHGFATIAPHLYFREGPGSPDDVGARVRAAGGVADEQVMGDVAGA
                     MEFLRAQPYVNGKVGVIGFCSGGRHTYLAACSLDGIDAAVDCWGGNVIVDDPKQLNAK
                     RPVAPIDLTAKLRCPLLGLFGNDDENPNRDQVNRTEAVLKKLGKSYDFHRYDGAGHAF
                     FNAARPAYRPEQALDGWDKVFAFFHKHLTAVAAARAA"
     gene            complement(1933..2304)
                     /locus_tag="VIQ50_08315"
     CDS             complement(1933..2304)
                     /locus_tag="VIQ50_08315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360422.1"
                     /translation="MMKLAGRVLSIVALAVLASPVQAEDDFPIVGTYTENQVCKPDGT
                     NPSVSRVKITTRDIDSVFGLCTILSRKREGATYVVHVECKSPGGSQMLGDVNFTPRED
                     KAIDFSDQDQTYKAVLYKCPD"
     gene            2472..>3209
                     /locus_tag="VIQ50_08320"
     CDS             2472..>3209
                     /locus_tag="VIQ50_08320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360423.1"
                     /translation="MNKPVCIPIVDVREGGPVRHALDARTRARALRDDCVTWLPRPAR
                     MLLPAMDALTRRWLQRSYSPYIAELEAIAATLRFPGIWFLNGTYQWGCSTVAREEDGV
                     PWLARTLDWPFPGLGRHVEIARMRGAAGEFVNVTWPGYAGTLTACAAGRFAAAINQAP
                     LWRRTRKPWLRPYDLAANALCTWPIRFRPPDHLLREVFETCRDFGKAKHRLETVPVAR
                     PVIFTLIGCERGERCVIERTEEGFASRV"
BASE COUNT          520 a         1021 c         1073 g          595 t
ORIGIN      
        1 cacggcgttg agcagcggat cgctttcctg cgccggcatg tcgacaatgc cgacggtcat
       61 cagccgattg acgtagaccg ccttgcggcc ggtgtcctcg tgggtgcgaa acaccggatg
      121 ggtgcattcg gcgaaggcta cggtgccgcg gctgtcgcac ttttgggtcg atccgtagtt
      181 gtagtggtgc atggccttgc ggccttcgag ccgatcgcgg atcgcgggat cgagcgtgtc
      241 ataggcggca taaccgctgg cgaacagcgt gttgccgccg gcggagggaa tttcgaccga
      301 ataaagcaac gtcgccttgc tcggcacctc ggcgtggatc atgtcgtgat gaaacatcat
      361 ctccccgtcg ggcagggcgc cgatcggctc gccgttctcg cggatgttgg agatcagcat
      421 gatgccgggg aggagacggg aatagccctt gggaaagtat ttcgccggcc gcgacagctc
      481 gccgagttcg ccgaaatagc cggtcacgcg gatcaaatct tcctgcgaga ggcgctggtc
      541 ggggaagacg atgacgaggt gatcgagcca tgccgtgtag atggcgcgga tgatctcctc
      601 gtcgggcttt tcgcgcagat cgaggccgcg gatttctgcc ccgatgtgct tgcccagggg
      661 aacgacgtgg aagcgcgtgc gggtctcgac gcccatggcg cctgctcctg cccgattggc
      721 cgtggcgcgc ccagcttgct attcggccgc ctgcacggcg tggtgcgccg ccttgccgtg
      781 ttcgatttcg ccgttggaca gcgcggcgag gatcttcgcg accagctcgc gcgcggaggc
      841 cgcgctcaat tccaccgcca cgcgatcgcg cccgccatcg gcttcgcaga tgaagtcgat
      901 gccgagcgcg tgatcgagcg gcgcgtggaa gggatgatcg taatagacgt tggcggtgtc
      961 gatacgcatc cagccattcg gccccttggc gctgcccagg agcttggcct tctcgacgat
     1021 gtaagagcac atgcgatcct ccttgcggct tcaggcggcg cgggccgcgg ccaccgcggt
     1081 caaatgcttg tggaagaagg cgaagacctt gtcccaaccg tcgagcgctt gctcggggcg
     1141 gtaggcggga cgcgcggcgt tgaaaaaagc gtggccggcg ccgtcgtaac ggtggaagtc
     1201 gtagctcttg ccgagcttct tgagcaccgc ttcagtacgg ttcacctggt cgcggttggg
     1261 gttttcatcg tcgttgccga acaggccgag cagcggacag cgcagcttgg ccgtgagatc
     1321 gatcggcgcg accggccgct tggcattgag ttgcttgggg tcgtcgacga tgacgttgcc
     1381 gccccagcaa tcgaccgccg cgtcgatgcc gtcgagcgag caggcggcga gatacgtgtg
     1441 ccgcccgccc gagcagaagc cgatcacgcc gaccttgccg ttgacgtacg gctgcgcgcg
     1501 caagaactcc atggcgcccg cgacgtcgcc catcacttgc tcgtcggcga cgccgcccgc
     1561 ggcgcgcacg cgcgcgccga cgtcatcggg gcttccaggc ccttcgcgga aatagagatg
     1621 cggcgcgatg gtcgcaaatc catgatgcgc gagcttgcgg gtagcctcct tgatccattc
     1681 gtcccaaccc ggcatgtgat ggatgagcac cacgccgggc caggggccgc cgagcgggcg
     1741 tgcgtaatag gcttcgccga ggtcgccgcg gtggccgcga aacgcgattg tttccgcgag
     1801 catgctttcg taggtcatgc cgttcctcac cagcttgatg ggcagtgcgc cacgattaca
     1861 cataaccgtg acgcggccta gggcttaagt gcggatcgag ctgttcggaa acgaagccgc
     1921 ctgcgcgggc gctcagtcag ggcatttata gagcactgcc ttgtaggtct gatcctgatc
     1981 ggaaaagtcg atggccttat cctcgcgcgg cgtgaagttg acgtcgccca gcatttggct
     2041 accgcccgga ctcttgcact cgacatgcac gacataggtc gcgccctcgc gcttccggct
     2101 caggatggtg cagaggccaa acacggagtc gatgtcgcgc gtcgtgatct tcacgcgtga
     2161 gacgctgggg ttggtgccgt cgggcttgca gacttgattc tcggtataag tgccgacgat
     2221 cgggaaatcg tcctcggcct gcactggaga cgcgagcaca gccagcgcga cgatgctcaa
     2281 caccctgcct gcaagcttca tcacctgtga cccctccgcc gcgtgatgtc ccgatgctga
     2341 gtgcagtgta aagaatgccc cggcagcggc caatgagcaa ttccgccgct ggcgcggctg
     2401 ggcgtcgcgg gacgccgacc atgcgacgcg ccggatggct ctgtgcgaag aactatcgta
     2461 agcattgccg gatgaacaag ccggtttgca ttcccatcgt cgacgtgcgc gaaggcgggc
     2521 ccgttcgcca tgccctagac gcgcgcaccc gggcacgcgc actgcgggat gattgcgtga
     2581 cctggctgcc gcgcccggcg cgcatgctgc ttcccgcgat ggatgcgttg acgcgccgtt
     2641 ggcttcagcg ctcgtattcg ccctacatcg ccgaactcga agcgatcgcc gccacgctcc
     2701 gctttcccgg catatggttt ctcaacggca cgtatcagtg gggttgcagc acagttgccc
     2761 gcgaagagga cggcgtgccc tggctcgccc gcacgctcga ctggccgttc cctgggctcg
     2821 gccgccatgt cgagatcgcg cgcatgcggg gcgccgccgg cgaattcgta aacgtcacct
     2881 ggcccggcta tgcgggcacg ctgaccgctt gcgcggcagg ccgcttcgcg gccgccatca
     2941 atcaggcacc gctttggcgc cgcacccgta agccgtggct gcggccctac gacctcgccg
     3001 ctaacgcgct gtgcacctgg ccgattcgct tccgcccgcc cgatcatctg ctgcgtgagg
     3061 tattcgagac ctgccgagac ttcggcaagg ctaagcaccg gctcgagacc gtgccggtcg
     3121 cgcgcccggt gatcttcacg ctcatcggct gcgagcgcgg cgagcgctgc gtgatcgaac
     3181 gaacggagga aggttttgcc agccgcgtc
//
LOCUS       DATCWM010000428         3025 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_462003, whole genome shotgun sequence.
ACCESSION   DATCWM010000428 DATCWM010000000
VERSION     DATCWM010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3025
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_462003"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..2123)
                     /locus_tag="VIQ50_08325"
     CDS             complement(72..2123)
                     /locus_tag="VIQ50_08325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter fused permease subunit"
                     /protein_id="HEY9360424.1"
                     /translation="MSESTSGADASAPAVSQERLQKAEAYVEAEEGVVNRLFGWAGRL
                     VTSIAVAMSLFHLYAAIAGAWPFTDFPIITTQPLRYAHVAFVLMLSFLLFPLSERFRN
                     RIRWWDIAAGIIAAAILVYAIEGGEEFTDRATMPTHLDVVLGVVFIVLLLEATRRTTG
                     WIVPFVALVFIAYAMAGPYLPPPWTHRGYDVSQLVGHLFITLEGIFGIPVDVSSSLII
                     LFTIYGAFLQHSGAGKFFIDFSMALMGHKANSAGRTVVLSSFLLGGPSGSGVATTVTI
                     GAVAYPLMQRAGFEKNAAGGLLAAGGLGAIISPPVLGAAAFLIAEFLKISYLDVIWMA
                     VIPTCLYYLSLLFMVELDAKRFGAQVVDFRQELTLAEMTRRYGFHFVSLVSIVIFMLW
                     GYSPTLAVFWSTVLTYGLSFLTRETAITPRKLVRALSDGSTSVLTAATTCATAGIIVG
                     VVTLTGLGLRFSSIVIDYAGGSLLLTAIYTALIVWIVGLAVPVTASYIICAVIAAPAM
                     IKLGVPDYAAHMFIFYYSVLSEVSPPTALSPFAAAAITGGDPYKTTLQAWKYTLPAFL
                     VPFVFVLDPQGIGLLLKVPKDGSWIDIVLITAKAALGLAALAAAAQGWALRKATLTER
                     SLLALAGLFLVFPSLLEALLEAAIGRDISYTATFGLAIAAAVLLRQRMSMARVQASPP
                     H"
     gene            complement(2151..>3025)
                     /locus_tag="VIQ50_08330"
     CDS             complement(2151..>3025)
                     /locus_tag="VIQ50_08330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="putative PEP-binding protein"
                     /protein_id="HEY9360425.1"
                     /translation="ALAKLLPMQRADFVELFEIMRGLPVTIRLLDPPLHEFLPHSEQE
                     IAEVAAAMGTDARKLADRARELHEFNPMLGFRGCRLALVYPEIAEMQARAIFEAADEA
                     AKRTGKPVVPEVMVPLIATKAELDLVKARIDAIAEAVASERGTKVDYQVGTMIELPRA
                     SLRAGEIAQSAEFFSFGTNDLTQTTYGISRDDAASFLGTYVARGVLPSDPFVSIDREG
                     VGELMRIGVERGRKMRPKLKMGICGEHGGDPASVAFCHEIGLDYVSCSPFRVPIARLA
                     AAQAALGKSAAGEA"
BASE COUNT          605 a          953 c         1005 g          462 t
ORIGIN      
        1 ggcaaccgcc gcggcaccca tggcgagcgc gcagatcaca aattctttgc gtttcatgat
       61 ggtggtacct cctagtgcgg ggggctcgct tgtacgcgcg ccatgctcat gcgctgtctt
      121 agcaggactg cggcggcaat cgccaagcca aatgtcgcgg tgtagctgat atcgcggccg
      181 atcgccgcct cgagcagcgc ctcgagcagg ctcggaaata ccagaaagag ccccgccaag
      241 gccaagaggg agcgttcggt caaggtcgcc ttgcgcaggg cccagccttg cgccgccgcg
      301 gccagcgccg ccagcccgag cgccgccttg gcggtgatca ggacaatgtc gatccaagat
      361 ccgtccttgg ggacctttag caacaagccg atgccctgcg gatcgagcac gaagacgaat
      421 gggacgagga aggcgggcag cgtatacttc caggcctgca gcgtggtctt gtagggatcg
      481 ccgccggtga tcgcggccgc tgcgaagggc gacagcgccg tcggcggcga cacctccgac
      541 agcaccgagt agtagaagat gaacatgtgg gcggcgtagt cggggacgcc gagcttgatc
      601 atggcgggcg cggcgatgac cgcgcagata atgtaggagg cggtgaccgg cacggccaaa
      661 ccgacgatcc agacgatcag cgcggtgtag atcgcggtca gcagcaggct tccgccggca
      721 taatcgatca cgatcgagga gaatctcagt cccaggccgg tcaacgtgac gacgccgacg
      781 atgatgccgg cggtcgcgca cgtcgttgcc gcggtcagca cgctggttga tccgtcggag
      841 agcgcgcgca ccagcttcct cggcgtgatc gccgtctcgc gcgtgaggaa gctcaggcca
      901 taggtcagca ccgtcgacca gaacaccgcg agcgtcgggg aataacccca caacatgaag
      961 atgacgatcg aaacgagcga cacgaagtga aagccatagc gccgcgtcat ctccgcgagc
     1021 gtcagttctt gccggaaatc cacgacttgc gcgccgaagc gcttggcgtc gagttccacc
     1081 atgaacaaca gcgacaggta ataaagacag gtcgggatga cggccatcca gatcacgtcg
     1141 aggtagctga tcttcagaaa ctcggcgatg agaaaggcgg cggcgccgag aacgggcggc
     1201 gagatgatgg cgccaaggcc gcccgccgcg agcagtccgc cggccgcgtt cttctcgaag
     1261 ccggcccgct gcataagcgg ataggcaacc gcgccgatcg tcaccgtggt cgcgacgccc
     1321 gagccggacg gtcccccgag caaaaaggat gacagcacca ccgtgcggcc ggcgctgttg
     1381 gctttgtgcc ccatgagcgc catcgaaaag tcgataaaga acttgcccgc gcccgagtgc
     1441 tgcaggaatg cgccatagat ggtgaacagg atgatcaacg acgaggaaac gtcgacggga
     1501 atgccgaaga tgccttcgag cgtaatgaac aagtggccaa cgagttggga aacgtcgtaa
     1561 ccgcggtgcg tccacggcgg cggcagatag ggaccggcca tggcataggc gatgaacacc
     1621 agcgcgacga acgggacgat ccagccggtc gttcgccgcg tcgcctcgag cagcaacacg
     1681 atgaagacca ctccgagcac gacgtcgagg tgcgtcggca tcgtcgcgcg gtcggtgaat
     1741 tcctcgccgc cctcgatggc ataaacgaga atcgcggcgg cgatgatgcc ggccgcgatg
     1801 tcccaccagc ggatgcgatt gcggaaacgc tcggagagcg gaaacaaaag gaagctcagc
     1861 atcagcacga aggcgacgtg ggcgtagcgc aggggctggg tggtgatgat gggaaaatcg
     1921 gtgaacggcc atgcgccggc gatggcggcg tagaggtgaa acagcgacat cgcgaccgcg
     1981 atcgaggtga ccagcctgcc ggcccagccg aacaagcgat tgaccacccc ctcctcggcc
     2041 tcgacatagg cctctgcctt ttgcagccgc tcctgggaaa cggccggcgc agaggcgtcc
     2101 gccccactgg tgctctcaga catgcgctgc ctgctgcgtc gctctcgtcc tcacgcttcg
     2161 cccgccgcgg acttgccgag cgcggcctgc gcggctgcga ggcgggcgat gggcacgcgg
     2221 aacggcgagc acgagacgta atcgaggccg atctcgtgac agaacgccac cgaagcaggg
     2281 tctcctccat gctcgccgca aattcccatt ttgagcttgg ggcgcatctt gcgaccgcgc
     2341 tccaccccga tccgcatcaa ttcacccacg ccttcgcgat cgatggagac gaaggggtcg
     2401 ctgggaagga cgccgcgcgc cacgtaagtg ccgaggaagc tcgcggcatc gtcgcggctg
     2461 atgccgtagg tggtctgggt taggtcgttc gtgccgaagg aaaaaaattc cgcgctctga
     2521 gcgatctcgc cggcccgcag cgaggctcgc ggcagctcga tcatagtgcc gacctgataa
     2581 tcgacctttg tcccccgctc gctcgcgacc gcttccgcta tggcgtcaat gcgcgccttc
     2641 acgaggtcca actcggcctt ggtggcgatc agcggaacca tcacctctgg cacgaccggt
     2701 ttgccggtgc gcttggcggc ctcgtctgcg gcctcgaaga tagcgcgcgc ctgcatctcg
     2761 gcgatctcgg ggtagaccag cgccagccgg cagccgcgga acccgagcat cgggttgaac
     2821 tcgtgcagct cacgggcgcg gtcagcgagt ttcctggcgt cggttcccat ggcggcggca
     2881 acctcggcga tctcttgctc gctgtgcggc aagaactcgt gcagcggcgg atcgagcagc
     2941 ctgattgtca ccggcagccc gcgcatgatc tcgaacagct cgacgaaatc cgcgcgctgc
     3001 atgggcagca gcttcgcgag cgcgg
//
LOCUS       DATCWM010000429         5764 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_224425, whole genome shotgun sequence.
ACCESSION   DATCWM010000429 DATCWM010000000
VERSION     DATCWM010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5764
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_224425"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..174
                     /locus_tag="VIQ50_08335"
     CDS             1..174
                     /locus_tag="VIQ50_08335"
                     /inference="COORDINATES: protein motif:HMM:NF013379.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HEY9360426.1"
                     /translation="MRARKALGALQAGDMLIAECTDPLTAIDIPNLLRETGDTMVSSA
                     REGDVLVFRIRKS"
     gene            complement(540..1508)
                     /locus_tag="VIQ50_08340"
     CDS             complement(540..1508)
                     /locus_tag="VIQ50_08340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008135059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEY9360427.1"
                     /translation="MKAAVATEQGLALRDIVQPKPKPNEVLVRVRAAALNRADLAVAR
                     GLPHGRHSGIGATVGLEWAGEVVETGAEVEGYAPADRVMCSGSGGYAEYAVSDWGRVN
                     PMPDGMSFEQAATLPVALITLHNALLTAGRLRRGERVMIQGASSGVGLMGLQIAKLMG
                     AELVVGSSTNDARRARLKEFGADLAVDTRDPAWADAVLAATGGNGVDLVVDMLSGPVV
                     VQTMKATAIRGRIVNVGRLAGMKAEFDFDLHALRRIDYIGVTFRTRTLEDVRQINRRM
                     RADLWDAVAAGKLTLPIDRRFPLDDAAAAQAHMRENKHFGKIVLTI"
     gene            1616..3310
                     /locus_tag="VIQ50_08345"
     CDS             1616..3310
                     /locus_tag="VIQ50_08345"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEY9360428.1"
                     /translation="MQEQLAIRKESDASAPQYKMRIEKDVDVPMRDGANLKADVFRPD
                     ADGQFPVLINMGIYQKDKLWIPPPDLEEKPNPHMNWETVNPEWWVPRGYCCVRVDERG
                     SGTSPGQSVLYSPQEAIDFYDAIEWTGHQPWSNGRVATIGISFFARTQWWVANLKPPS
                     LACIVPWEGAADQYRDILYHGGIFGSGFIVGWFTTHMAHHMLGRAYRTNPDTFQDNVL
                     WRFMRNSLDSGAFKTQQAQWDNVDLPMWAVGNWSGMGLHLRGATEGYMRAASKHKKLR
                     IHCGTHYHPFYSEDGRRDQLRFFDYWLKDIDNGVMAEPPVKLAIRTGHGAYHFRDENE
                     WPIARTQWTKLYLDLSAPQTQADGMAGTLARSNPTAAGKRSYSATGASDAGHASASST
                     SLAAGGGGGLSFVTPPLEQDTEITGPLAARLWVSSTTEDMDLFLTLRNIDPAGNDVLE
                     IGQQGQPVPVAKGWLRVSHRELDRELSLPYRPYHKHLRRQWLTPNEIVEVQVEIWPTS
                     MVFKRGHRIRLDIQPRDGIGSAPYTHYHADYNVGENTIYSGGDRESFLLVPIIPPK"
     gene            3346..4419
                     /locus_tag="VIQ50_08350"
     CDS             3346..4419
                     /locus_tag="VIQ50_08350"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9360429.1"
                     /translation="MVRATKRRMRPARRSGGRSPSGKPVRGVTKLARSRGPSPKPIVI
                     DVHAHVLVPEVMKRTFEHSQYAHAVAGGNGMPEPLFQRMTELPLRLREMDATGVDMQI
                     ISPSIMQQCTYAFEAQEALEMDRRSNDRIAEAVAQHPDRLIGLASLPLQDVALSAAEL
                     ERCMRDLKLRGVIVSSHINGIELGEARLQPFWAKAEALGAVVFVHPAGSTEKRMLRHR
                     LMITVGQPLEEAFALSSLIYEGVMDRFPKLKILVAHGGGYLPFYAGRHDNEYRYGRSP
                     QLKGEFSSYLPRFFYDTVLFNPDMLEFLLSKVPASHVMLASDYPFAEKRPVEYVRRAK
                     KIGRKERDAILGANAARLFGIPV"
     gene            4558..5073
                     /locus_tag="VIQ50_08355"
     CDS             4558..5073
                     /locus_tag="VIQ50_08355"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY9360430.1"
                     /translation="MAINKSLEDRIRAIEDRLEIYNLIASHPPSADTGGSDHIAASWV
                     EDGVFDRGENLSSPHGREQLANQVLSAEHQAAIDRGLAHFTSLPHVAIDGDRAVVTSY
                     LQILVPQTQGDPVDVPNHGSSRGFRVHRMTANRWELVRTPQGWKIKRRSLRQLDGSLP
                     ARKILQQAISG"
     gene            complement(5128..>5764)
                     /locus_tag="VIQ50_08360"
     CDS             complement(5128..>5764)
                     /locus_tag="VIQ50_08360"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEY9360431.1"
                     /translation="AARGIGCLIVDGPGNGESVRFRNLPLIAETERYGTAAYEYLSAR
                     REFDPRRVGVMALSLGGYYAPRAAALEPRFACCVAWGAQWDYHAIWAKRLDELASGKV
                     LSLSVPPEHLQWVLGVSSQAAALKKLEAFRLDGIVQKMACPFLLLHGAGDEQIPLPLA
                     EKCFAAVGSKHKTMKVFSREEGGFHHCQVDNVTIGVHYMWDWIEDVLRPGT"
BASE COUNT         1047 a         1879 c         1821 g         1017 t
ORIGIN      
        1 ctgcgcgcgc gcaaggcgct gggcgccttg caagcgggcg acatgctcat cgccgaatgc
       61 accgacccgc tcacggcgat cgacatcccc aacctgttgc gggagaccgg agacaccatg
      121 gtgtcgagcg cgcgcgaggg cgatgtgctg gtgtttcgga tccgcaagag ctgaggccgg
      181 ccgaatccgc ttgtcattca aacgagatat agccttttca aagattcgct tgactcatgt
      241 aacaagaatc ttccagcttt ggtcattctc caaatttgtg cctgcaattg gccaaccgat
      301 gcgctgcgcg ttcgcggctc ctgttatctc tctgttacgc ccctgttatt cgtctgttat
      361 ttcgcccatg ctccgagaat tcgtctgtct tttccgactg ttgcgttcca gcccctgtct
      421 tttccctgtt ccttacagga gcaacgccct ggactgcacc cttcggctga gacacgagcc
      481 tgcagggcat gctgcgctga ccctttgcct gcgcggacta tgggccgcgc acgagcagct
      541 catattgtca gcacgatttt gccgaagtgc ttgttctcgc gcatgtgcgc ctgcgccgcc
      601 gcggcgtcat cgagcgggaa acggcggtcg atcggcaagg tgagcttgcc cgcggccacc
      661 gcgtcccaca gatcggcgcg catgcggcgg ttgatctggc gcacgtcctc cagcgtgcgg
      721 gtgcggaagg tgacgccgat atagtcgatg cgccgcagag cgtgcaggtc gaagtcgaac
      781 tcggccttca tgccggcgag gcggcccaca ttgacgatgc ggccgcggat ggcggtcgct
      841 ttcatcgttt gcacgacgac gggacccgat agcatgtcga ccacgagatc gacgccgttg
      901 ccgccggtcg cggcgagcac cgcatcggcc caggccggat cgcgggtatc gacggcgaga
      961 tcggcgccga actccttgag acgcgcgcgg cgcgcatcgt tggtggacga gccgaccacc
     1021 agttcggcgc ccatcagttt ggcgatctgc aggcccatga gcccgacacc cgagctcgcg
     1081 ccctgaatca tcacgcgctc gccccggcgc aggcggccgg cggtgaggag cgcattgtgc
     1141 agcgtgatca gcgcgaccgg cagcgtcgcc gcctgttcga agctcatgcc gtccggcatc
     1201 gggttgacgc gtccccagtc gctgacggcg tattcggcat agccgccgct gccggagcac
     1261 atgacgcggt cggccggcgc gtacccctcg acctcggcgc cggtctcaac cacctcgccc
     1321 gcccattcga ggccgaccgt ggcaccgatc ccgctgtggc ggccgtgggg aaggccgcgc
     1381 gcgacggcga ggtcggcacg gttgagcgcc gcagcgcgta ccctcaccag cacttcgttg
     1441 ggcttcggct tgggttgcac aatgtcgcgc aacgccagtc cctgctccgt cgcaacggcg
     1501 gctttcatgc gctctccgtc gatcgtttcg ttccggtcac ttgtatcccc tacatagccg
     1561 cacgtcttgc cgtctgatag cgttgatagc aaacacaagc cattgggagg cacccttgca
     1621 agagcaactg gcgatccgca aggagagcga tgcgtccgcg ccccaataca agatgaggat
     1681 tgagaaggac gtcgacgtcc cgatgcgcga tggcgccaac ctcaaggccg acgtgttccg
     1741 gccggatgcc gatgggcagt ttccggtgct gatcaacatg ggcatctacc agaaagacaa
     1801 gctctggatt ccgccgcccg acctggaaga gaagcccaat ccgcacatga actgggaaac
     1861 cgttaacccg gaatggtggg tgccgcgcgg ctattgctgc gtacgcgtcg acgaacgcgg
     1921 ctccggcacg tcgccagggc aatcagtgct ctattcaccg caggaggcga tcgactttta
     1981 cgacgcgatc gagtggaccg gccatcagcc ctggagcaac ggccgcgtcg cgaccatcgg
     2041 catctcgttc ttcgcgcgca cccaatggtg ggtggcaaat ctcaagccgc cgtcgctcgc
     2101 ttgcatcgtg ccgtgggagg gcgcggccga tcagtaccgc gacatcctct atcacggcgg
     2161 cattttcggc tcgggcttca tcgtcggctg gttcaccacc cacatggcgc accacatgct
     2221 cgggcgcgcc taccggacca atcccgacac ctttcaggac aacgtgctgt ggcgattcat
     2281 gcgcaatagc ctggacagcg gagcgttcaa gacccagcag gcgcaatggg acaatgtcga
     2341 tctgccgatg tgggcggtcg gcaactggtc aggcatggga ttgcacctgc gcggcgcaac
     2401 cgaaggctac atgcgcgccg cctcgaagca caagaagctg cgcatccact gcggcacgca
     2461 ttaccatccg ttctatagcg aagacgggcg tcgcgatcag ctgcgcttct tcgactactg
     2521 gctcaaggat atcgacaacg gcgtaatggc cgaaccgccg gtgaagctcg ccattcgcac
     2581 cggtcacggc gcgtatcatt tccgcgatga gaacgagtgg ccgatcgcgc gcacgcagtg
     2641 gaccaagctc tacctcgacc tgtctgcgcc gcagacgcaa gccgatggca tggccggcac
     2701 gctcgccagg agcaatccca ccgcggccgg aaagcgcagc tattccgcaa ccggcgcatc
     2761 cgacgcgggg cacgcctcgg cctcctcgac ctcgctggcc gccggcggcg gagggggact
     2821 ttcgtttgtc acgccgccgc tcgagcaaga caccgaaatc accggtccgc tcgccgctcg
     2881 gctctgggtg tcgagcacga ccgaggacat ggatttgttt ctcacgctgc gcaacatcga
     2941 tccggccggc aacgacgtgc tggagatcgg acaacaaggg cagccggtgc cggtggctaa
     3001 gggctggctg cgggtttcac atcgcgagct cgaccgcgaa ttgtcgcttc cctatcgccc
     3061 ctaccacaag catctgcggc ggcaatggct cacgccgaac gagatcgtcg aggtgcaggt
     3121 ggagatttgg ccgacctcga tggtgttcaa acgaggccat cgcatccgcc tcgacattca
     3181 gccgcgcgac ggtatcggca gcgcgcctta cacgcactac cacgccgact acaatgtcgg
     3241 ggagaacacg atctattccg gcggcgatcg ggaatcgttc ctgctggtcc cgatcattcc
     3301 gccgaaataa ggcgcgacgg gccgcgacga acactggagg acgcgatggt gagagcaacc
     3361 aagcggcgca tgcggcctgc ccggcgatcc ggtggccgct ccccgtcggg caagccggtt
     3421 cgaggcgtga caaagctcgc gcgatcgagg gggccctcgc ccaagccgat cgtcatcgac
     3481 gtgcacgccc acgtgctcgt gccagaggta atgaagcgga cctttgagca ttcgcaatac
     3541 gcacatgccg tggcgggtgg aaacggcatg cccgagccgc tgttccagcg catgaccgag
     3601 ctgccgttgc gcctgcggga gatggatgca accggcgtcg acatgcagat catcagcccg
     3661 agcatcatgc agcaatgcac ctacgccttc gaggcgcagg aggcgctgga gatggatcgt
     3721 cgcagcaacg atcgcatcgc cgaggcggtg gcgcagcatc cggaccggct catcgggctg
     3781 gcctcgctgc ccctgcaaga cgtcgcgctc tccgctgccg aactcgagcg gtgcatgcgg
     3841 gatctcaagc tgcgcggcgt gatcgtgtca tcgcacatca acgggatcga gttgggcgag
     3901 gcgcgcctgc aaccgttctg ggccaaggcg gaagccctcg gcgccgtggt cttcgttcat
     3961 cccgccggca gtaccgagaa gcgcatgttg cggcaccggc tgatgatcac ggtcgggcag
     4021 cccttggaag aagccttcgc cttgtcctcg ctgatctacg agggcgttat ggatcggttt
     4081 ccgaagttga aaatcctggt cgcccacggc ggcggatatc tgccgttcta cgccggccgg
     4141 cacgacaacg agtatcgcta cgggcgttcg ccgcagctca agggggagtt cagcagctac
     4201 ctgccgcggt ttttctatga caccgtgctg ttcaatcccg acatgctgga attcctgttg
     4261 agcaaggtcc ccgcgagcca cgtcatgctg gcctccgact atccgtttgc ggagaagcgg
     4321 ccggtcgaat acgtgcggcg cgcgaagaag atagggcgca aggagcggga cgcgattctc
     4381 ggtgccaacg ccgcgcggct gtttggcatt ccggtctgat cgctcgtcat cgtggcgctc
     4441 ggcggtgtcc gactaagtac acatcgtcga tcggccggtg aagacacgtc gcagtccttt
     4501 tcgctactcg gaacgcctac tcgccgttcg ccattcgccg ataggatagg agcagacatg
     4561 gccatcaaca aaagcctcga agaccgcatc cgcgccatcg aagaccggct cgaaatctac
     4621 aacttgatcg ccagtcatcc gcccagcgcc gataccggcg gcagcgacca catcgcggcc
     4681 agctgggtgg aagacggggt tttcgatcgc ggcgagaacc tctcgagccc gcacgggcgc
     4741 gaacagcttg ccaatcaggt gctcagcgcc gagcatcagg ccgcgatcga ccgcgggctg
     4801 gcgcacttca cctcgcttcc ccacgtggcg atcgacggag atcgcgcggt cgtcacatcc
     4861 tatcttcaga tcctggtgcc gcagacgcag ggcgatcccg tcgatgtccc gaaccacggc
     4921 agctccaggg gatttcgcgt ccatcgcatg acggcaaacc gctgggagct cgtgcgcaca
     4981 ccgcagggct ggaagatcaa gcgccgcagc ttgcgtcagc tcgacggctc gctgccggcg
     5041 cggaaaatcc tgcaacaagc catttcgggt tagagggccg gccgggtcag cttcaaggac
     5101 tcgagtacat cgcccgttcg cctcggatca ggttcccggg cggagcacgt cttcgatcca
     5161 atcccacata tagtgcacgc cgatcgtgac gttatcgacc tggcagtgat ggaagccgcc
     5221 ctcctcgcgt gaaaagacct tcatggtctt gtgcttggag ccgaccgcgg cgaagcattt
     5281 ttctgcgagc ggcagcggaa tctgttcgtc gcctgcaccg tgcaggagca aaaacgggca
     5341 ggccattttc tgcacgatgc cgtcgagccg aaacgcttcg agctttttga gcgccgccgc
     5401 ctggctcgag acgccgagga cccactgcag atgctcgggc ggaaccgaga gcgaaagcac
     5461 cttgccggag gcgagttcgt cgagccgctt tgcccagatt gcgtgataat cccactgtgc
     5521 gccccaggcg acacagcagg cgaaacgcgg ctcgagcgcg gcggcccgcg gcgcgtagta
     5581 accgcccagg ctgagcgcca ttacgccgac gcggcgagga tcgaactcgc ggcgggcgct
     5641 gagatattcg tacgcggcgg tgccatagcg ctcggtctcg gcgatgaggg gtaggttgcg
     5701 gaagcgcacg ctctcgccgt tgccggggcc gtcgacgatg agacagccga tgccgcgcgc
     5761 ggcg
//
LOCUS       DATCWM010000430         2853 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_203055, whole genome shotgun sequence.
ACCESSION   DATCWM010000430 DATCWM010000000
VERSION     DATCWM010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2853)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2853)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2853
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203055"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(196..321)
                     /locus_tag="VIQ50_08365"
     CDS             complement(196..321)
                     /locus_tag="VIQ50_08365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360432.1"
                     /translation="MRRLSANPNVRARVSKDEDERLDVPSCFETPRIALEFARVA"
     gene            complement(362..1585)
                     /locus_tag="VIQ50_08370"
     CDS             complement(362..1585)
                     /locus_tag="VIQ50_08370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional alpha/beta hydrolase/OsmC family
                     protein"
                     /protein_id="HEY9360433.1"
                     /translation="MPAERFDFPNAQGQKLAALLDRPVGEPRAYALFAHCFTCGKDIR
                     AAKRVAEGLTALGIAVLRFDFTGLGSSEGEFANTTFSSNVGDLVAAANELRRKAQAPA
                     ILVGHSLGGTAVLAAAAEVAEARAVVTIAAPCDPTHVTGLFKDRLEEIAAKGEIQATL
                     AGRQFRISRAFVDDLAEQKLMQRIADLHKALLIFHSPTDEIVAIDNASRIFAAAKHPK
                     SFVSLAVADHLLSRRSDAAYVANVIHAWAERYLEGPQPASEAAGDAKTVVVRETGGGR
                     FQQEVTVGTHRFLADEPLEVGGLDSGPGPYDLLLAGLGACTAMTLRLYAERKALPLER
                     VTVRLNHSRIHASDCADCETKEGMLDRIDRAITLRGALDAEQRRRLLEIADKCPVHRT
                     LTSEIDIRTVEQPEG"
     gene            2009..>2853
                     /locus_tag="VIQ50_08375"
     CDS             2009..>2853
                     /locus_tag="VIQ50_08375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360434.1"
                     /translation="MGVDIETASNGWQRDLDRLESALKQPRLRYSELNDRRDELQRVR
                     AGIEDFSKRLQPPLAAAKDQVALLGPAPAAGQPPEPDQVALNRAELNYLFGLLSAGQA
                     AVQSANLRIDQLINTIQDIRLKNFTTSLFQPVPGIYSYQTWAKVPDDVTSAKSRVSGI
                     LTDWWDSVRDQNDVLLLAFEAVLLWLVLTLAAWQGVRRLRCWRHEGEPPFWRRASSAA
                     GVIVLRILPIVTPVMFLYGMIAETHALPERVDWIFYSTAQSIIIIFAINALVTTVFAP
                     RSSQWR"
BASE COUNT          510 a          927 c          913 g          503 t
ORIGIN      
        1 gagccgctcg gcgtgacggt ggcgagctcg acccccgaag aacttaccgc acgcatgaag
       61 gcggaagccg agttgtgggg tccgatcgtc aaggccgcga atatccgggg cgagtaagcg
      121 cgcagtcaca ggcacagcgc agcaacgcag ataagtgccg ccttcatgct gaggagccgc
      181 gcagcgcagg caagctcagg cgacgcgcgc aaactcgagt gcgatgcgcg gcgtctcgaa
      241 gcatgagggc acatccaatc tctcgtcctc atccttcgag acgcgcgcac gcacgttcgg
      301 gttcgccgaa agtcttcgca ttgcgcgctc ctcaggatga ggacgagcac cgcgcaataa
      361 ctcacccctc cggctgttcc accgtgcgaa tgtcgatctc cgatgtcagc gtgcggtgca
      421 ccggacattt gtcggcgatt tcgagaagcc gccgccgttg ctccgcgtcg agggcgccgc
      481 gcagggtgat cgcccgatcg atgcggtcga gcatgccctc cttcgtctcg cagtccgcgc
      541 agtccgaagc gtgaatgcgc gagtgattga gcctgaccgt cacccgctcg agcggcagtg
      601 ctttgcgctc ggcatagagg cgaagcgtca tggcggtgca agctcccagt cccgcgagca
      661 gcagatcgta cggacccggg ccgctgtcga ggccgccgac ctcgaggggc tcgtcggcga
      721 gaaagcggtg cgtgccgacc gtgacttcct gctgaaagcg ccctcccccg gtttcccgca
      781 cgaccaccgt tttggcatcg cccgccgcct ccgacgcggg ctggggcccc tcgagatagc
      841 gctcggccca ggcgtgaatg acgttagcca catatgcggc gtcgctgcgg cggctgagca
      901 ggtgatcggc gacggcgagc gaaacgaagc ttttcggatg cttggccgcg gcgaagatgc
      961 ggctcgcgtt gtcgatggcg acgatctcat cggtcggcga atggaagatg agcagcgcct
     1021 tgtgcaaatc ggcgatgcgc tgcatgagtt tttgttcggc gaggtcgtcg acgaaagcgc
     1081 ggctgatgcg aaattgccgg cccgccagcg tggcttggat ctcgcccttg gcggcgattt
     1141 cctcgagtcg atccttgaac agcccggtca cgtgggtcgg atcgcagggc gcggcgatcg
     1201 tcactaccgc gcgcgcctcc gccacctcgg ccgctgcggc aaggactgcg gtaccgccga
     1261 ggctgtggcc gacgaggatc gcaggcgcct gcgctttgcg gcgcaattcg ttcgcggccg
     1321 cgaccagatc gccgacgttg gaggaaaacg tcgtgttggc gaactcgcct tcgctcgagc
     1381 cgagcccggt gaagtcgaaa cgcagcacgg cgatgccgag cgcggtgagc ccttcagcca
     1441 cgcgcttggc ggcacggatg tccttgccgc aggtaaagca atgcgcaaac agcgcgtagg
     1501 cgcgcggctc gccgacagga cgatcgagca gcgcggcaag tttctggcct tgggcgttgg
     1561 gaaaatcgaa gcgctcggcc ggcatgctct cctcccgttc cacggcgcac agagcacagc
     1621 aggatttttg ccgacgggaa agcgcggcgc gcgcttttgg aactagaccc cacgggatac
     1681 cgccgactga gttccatgcc acgactgctc agcctgcgaa atcgcgcatt gccatattgt
     1741 gcccgccatc gaccgttaag cggcgccctg agggaactac cagggggcgg ccatgatcga
     1801 ccgatttcga gatattgcgc gcactttggc ggccgttctg ttgctcggca tagccggcgc
     1861 ccaaaccgca cagtcgcaga catcgccaaa tccgggttcc gcgccgcaag ctagctctgt
     1921 cccgactgct caagctcctg cccagccggc agtcgcggcc ggcccaaaga tcaacgtcgc
     1981 tgaaatcacc gcgcgcgcga accgggacgt gggcgtcgac atcgagacgg caagcaacgg
     2041 ttggcaacgc gaccttgacc gcctggagag tgctctcaag cagccgcgcc tgcgctattc
     2101 ggagctaaac gatcgtcgcg atgagctcca gcgcgtccgc gccgggatcg aagatttctc
     2161 gaaacgtctc cagcccccac tcgcggccgc gaaggatcag gtggctctgc tagggccggc
     2221 gccggccgct ggccaaccac cagagccaga tcaagtcgcc ctcaatcggg ccgaactcaa
     2281 ttacctcttc gggctgttat cggcaggcca agctgcggtc cagtccgcca atctgcggat
     2341 cgaccagctc atcaacacca tccaggacat tcggctgaag aatttcacca ccagtctgtt
     2401 ccagcctgtc ccgggcatct actcgtacca gacttgggca aaggtgccgg acgacgtgac
     2461 ctcggcgaag agccgcgtta gcggcatcct gaccgattgg tgggacagtg tccgcgatca
     2521 gaatgatgtc ttgctccttg cgttcgaagc tgtcctgctg tggctcgtgc tgacacttgc
     2581 ggcgtggcag ggcgtgcgcc gattgcgctg ctggcgacac gagggcgagc cccccttctg
     2641 gcggcgggcg tcatcggcgg ccggcgtcat tgtgctccga atattgccca tcgtgacgcc
     2701 agtcatgttc ctgtacggca tgattgccga gacgcacgcg ctgcctgaac gcgtcgattg
     2761 gatcttctac tcgaccgcgc aatcgatcat catcattttc gccattaacg cgcttgtcac
     2821 cacggtgttc gcaccgagat catcgcagtg gcg
//
LOCUS       DATCWM010000431         2019 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_489067, whole genome shotgun sequence.
ACCESSION   DATCWM010000431 DATCWM010000000
VERSION     DATCWM010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2019
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_489067"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..818)
                     /locus_tag="VIQ50_08380"
     CDS             complement(<1..818)
                     /locus_tag="VIQ50_08380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014765015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9360435.1"
                     /translation="MRAEHATERGLPRAVWALGLTSLFMDTSSELIHGLLPVFLVVTL
                     GASATALGVIEGIAEATAQITRVFSGWLSDALGRRKALTVAGYGLAAATKPLFPLANS
                     IGLVLVARFLDRIGKGIRGAPRDALVADLAPAEKRGEAFGLRQSLDTIGATLGPAAAI
                     ALMYLFHDDIRTVLWFAVIPAVLAVVVLVLGVKEPKHAQARAQVPLHAKEIGQLPSAY
                     WLVIVAGTVFTLARFSEAFLVIRARDGGLALAWAPAVIAVMSLVYAASAYPAGWL"
     gene            908..>2019
                     /locus_tag="VIQ50_08385"
     CDS             908..>2019
                     /locus_tag="VIQ50_08385"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEY9360436.1"
                     /translation="MIAVPSADPVGALVPHTLKEPLIGGSSGPLAGTSFMVKDLFAIK
                     GRKVSNGSPDFYGHATPARETAPVITRLLEAGASCTGITVCDEFFYSVLGSNIHYGQP
                     VNARAPKHVTGGSSCGAAAAVAASMCNFALGTDTAGSIRVSASFCGLYGLRPTYGRID
                     TTGATPMAPSYDTVGFLARDSELFRKVGHVLLQGATAEAKIERLILAENFFRHAEASM
                     DQALWEAIGKIGGALPRPEHVEIDGEEEVAAWRNAFRLIQGFEIQSTLLPFIQSHTVE
                     LGPGIKERFDMAAAITLAEADAARALRAEIADRLLALISIGTLIVLPTTPTLPPERDI
                     PDGASFSEFRGQTLGFTCLAGHSGLPQVSVPVGLAAG"
BASE COUNT          366 a          664 c          653 g          336 t
ORIGIN      
        1 agccagcctg cgggataggc gcttgctgca tagacgaggc tcatcaccgc gatgaccgcg
       61 ggagcccagg cgagagcgag gccgccgtcg cgggcgcgga tcacgaggaa cgcctcgctg
      121 aacctcgcca aggtgaagac cgtgccggcg acgatcacga gccaataggc tgaaggaagc
      181 tgcccaatct ctttcgcatg aagcggaacc tgcgccctgg cttgcgcgtg cttgggctcc
      241 ttgacgccga gcaccagaac gacgaccgca agcaccgcag gtatgacggc aaaccacagc
      301 acggtgcgga tgtcatcgtg gaagagatac atcagcgcga tggccgctgc gggaccgagc
      361 gtggcgccga tcgtatcgag cgactggcga agcccgaacg cctcgccgcg cttctctgcc
      421 ggcgcaaggt cggccaccag cgcatctcgc ggcgcgcctc tgatcccttt gccgatgcgg
      481 tcgagaaagc gcgcgacgag cacaagtcca atagagttgg cgagcgggaa tagcggcttg
      541 gtggctgcag cgagaccgta gcccgccacg gtgagcgcct ttcgccgccc gagcgcatct
      601 gacagccagc ccgagaacac acgggtaatt tgcgccgtgg cctcggcgat gccttcgatc
      661 acgccgagcg ctgtcgcgct cgcgccaagg gtgacaacga gaaatactgg aagcagccca
      721 tggatcagct ctgacgaggt gtccatgaac agcgacgtga gcccgagcgc ccacactgcc
      781 cgcggcaagc cccgttcggt tgcgtgttca gcccgcaccg gcgtcctccg tttggcgcat
      841 tgagggatgg ctgcccgtgt tatatgggct taccgcagga gtccatgcgg cagagggagg
      901 gggaagaatg atcgcagttc cctccgcgga tccggtcggc gccctcgttc ctcacacgct
      961 gaaagagccg ctcattggag gcagctccgg cccccttgcc ggaacaagct tcatggtgaa
     1021 ggacctgttc gccataaagg ggcgcaaggt ctccaacggc agtcccgatt tctatgggca
     1081 tgcgacgccg gcacgagaga ccgcgccggt catcacgcgc ctgctcgagg ccggcgcatc
     1141 gtgcaccggc ataaccgtgt gcgacgagtt cttctatagc gtgctcggct cgaacatcca
     1201 ttacggccag cccgtcaatg cgcgcgcgcc gaagcacgta actggcggct cttcgtgcgg
     1261 tgcggctgcg gcggttgccg cttctatgtg caacttcgcg ctcggcacgg acacggcagg
     1321 atcgatccgc gtgtcggcct cgttttgcgg gctatatggc ctcaggccga cctacggacg
     1381 catcgacacg accggcgcga cgccaatggc gccgagctat gacacggtcg gctttcttgc
     1441 ccgcgactcc gagcttttcc gcaaagtggg ccatgttctg ctgcaaggcg caacggccga
     1501 agcgaagatc gagcggctga tactcgccga gaatttcttc cgccatgccg aggcgagcat
     1561 ggatcaggcg ctatgggagg cgatcggcaa gatcggcggc gcattgccca gacccgagca
     1621 cgtggagatt gacggtgagg aggaagttgc cgcctggcgc aacgccttcc gcctcattca
     1681 aggcttcgag atccaatcga cgctgctgcc cttcattcag tcgcacactg tcgagctcgg
     1741 acccggcatc aaggagcgat tcgacatggc ggcggcaatt accctcgccg aagccgacgc
     1801 tgcgcgcgcc ttgcgcgccg aaatcgccga ccgcctgctc gccttgatct cgatcgggac
     1861 gctgatcgtg ctgcccacga cgccgacgct gccgcccgag cgcgatattc cggacggcgc
     1921 ctcgttctcg gagttccgcg ggcaaacgct cggattcacc tgccttgccg gccattccgg
     1981 cctgccgcag gtctcggtgc cggtcggact ggctgccgg
//
LOCUS       DATCWM010000432         2555 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_116744, whole genome shotgun sequence.
ACCESSION   DATCWM010000432 DATCWM010000000
VERSION     DATCWM010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2555)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2555)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2555
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116744"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..304)
                     /gene="grpE"
                     /locus_tag="VIQ50_08390"
     CDS             complement(<1..304)
                     /gene="grpE"
                     /locus_tag="VIQ50_08390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEY9360437.1"
                     /translation="MPDRTVRAPGTATDQNDREAGQAASETPINSPAGEMPAAKEDPM
                     AVLAREAADYKDKLLRSLAEMENLRKRTERQVADAREYGIASFARDILAVADNMERA"
     gene            complement(394..1470)
                     /gene="hrcA"
                     /locus_tag="VIQ50_08395"
     CDS             complement(394..1470)
                     /gene="hrcA"
                     /locus_tag="VIQ50_08395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HEY9360438.1"
                     /translation="MSHDVPIGATQVSLAQLNERSRDIFRQIVESYLATGEPVGSRNI
                     SRLITTPLSPASVRNVMSDLEQLGLIYAPHTSAGRLPTEFGLRFFVDALMEIGDLGES
                     DRREMEAKVAAAGKSMDAVLNEASGMLSELTRAAGVVLAAKSNVRLKHIEFVRLEPES
                     AMAILVAEDGQVENRIINVPMGLPASSLTEAANFLNAHVRGCTLAEARAELEKAHAAA
                     QAELDLLTQKIIAAGLASWSGGESDERKLIVRGAAHLLDDLRAVEDLERVRLLFDDLE
                     TKRGVIDLLGRAERAEGARIFIGSENKLFSLSGSSTIVAPYRDGAGRIVGVLGVIGPT
                     RLNYARVIPMVDYTAKVVTKLIGG"
     gene            1615..2328
                     /gene="rph"
                     /locus_tag="VIQ50_08400"
     CDS             1615..2328
                     /gene="rph"
                     /locus_tag="VIQ50_08400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004549 - tRNA-specific ribonuclease
                     activity [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HEY9360439.1"
                     /translation="MRPSRRQPDELRAISLERGVVKYAEGSCFVKFGDTHVLVTATLE
                     DRLPPWLKGQARGWVTAEYGMLPRATSERTRREASAGKQSGRTIEIQRLIGRSLRAVL
                     DLPTLGERQVTIDCDVIQADGGTRTAAITGAWVALHDCINWMKAREMVTGEPLRDHVA
                     AISCGICNGTPVLDLDYAEDSEADTDANFVMTGAGRIVEVQGTAERTPFTEEQFLNLL
                     VLAKKGVMKLVDLQKLAVM"
     gene            2325..>2555
                     /locus_tag="VIQ50_08405"
     CDS             2325..>2555
                     /locus_tag="VIQ50_08405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0009143 - nucleoside triphosphate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="non-canonical purine NTP pyrophosphatase"
                     /protein_id="HEY9360440.1"
                     /translation="MSTSRELVTTSKGAHRRLAGRLVIATHNPGKLEEMRELLMPFGI
                     DTVSARELGLPEPAEDGTTFKENARLKARAAAT"
BASE COUNT          448 a          815 c          847 g          445 t
ORIGIN      
        1 gcgcgcgctc catattgtcg gcgaccgcga gaatatcgcg tgcgaaggag gcgatgccgt
       61 actcgcgagc atccgccacc tggcgctcgg tccgcttgcg cagattttcc atttccgcga
      121 gcgagcgcag cagtttgtcc ttgtaatcgg cggcttcgcg ggcgagcacg gccatggggt
      181 cctcttttgc cgctggcatc tcgccagccg gggaattgat cggcgtctcg gacgcggcct
      241 ggccggcttc tcgatcgttc tgatcggtcg cggtgcccgg tgcgcgaacg gtcctatccg
      301 gcattgtctt gtccccacct acaactcggt ttcttccccg atatcagggc tgaggccgca
      361 aaaatcaagc cgcaacgggt cgttgcagcg gcatcatccg ccgatcagct tagtcacgac
      421 tttggcggtg taatccacca tcgggatgac ccgcgcgtag ttgagccgcg tcggcccgat
      481 cacgccgagc accccgacga tgcggccggc accgtcgcgg tatggggcca caatggtgga
      541 ggatccggag agggagaaca gcttgttctc cgagccgata aagatacggg cgccttcggc
      601 gcgctcggcg cggccgagga gatcgatcac gccgcgcttg gtttcaagat cgtcgaacag
      661 aagtctcacc cgctcgaggt cctcgaccgc cctgagatcg tcgagcaggt gagccgcgcc
      721 acgtacgatc agcttgcgct cgtcggattc tcccccggac cagctggcga gaccggcagc
      781 gatgatcttc tgcgtgagca ggtcgagttc ggcctgggca gccgcatgcg ctttctccag
      841 ttcggccctg gcctcagcca atgtacagcc gcgcacatgg gcattgagga agtttgcagc
      901 ttcggtgaga gaggacgcgg gcagacccat tgggacattg atgatgcggt tctcgacctg
      961 cccgtcttcg gcgacgagga tggccatcgc gctctccggc tccagccgaa cgaactcgat
     1021 atgcttcaac cgcacgttcg atttagccgc caggaccacc ccggctgcgc gcgtgagctc
     1081 cgagagcatg ccggaggctt cgttgagcac tgcgtccatg gacttgccgg cggcggcgac
     1141 tttggcctcc atctcgcgcc ggtcggattc gccgagatcg ccgatctcca tcagcgcgtc
     1201 gacgaagaag cgcaagccga actcggtcgg cagtcgcccg gcggacgtgt gcggcgcata
     1261 aataagaccg agctgttcca ggtccgacat cacgttgcgc acggaggcag gcgagagcgg
     1321 tgtcgtgatc aagcgggaga tattgcgcga gcccaccggt tcgccggtgg caaggtagct
     1381 ctcgacgatc tgccggaaga tgtcgcgcga gcgctcattg agctgagcga ggctcacctg
     1441 cgtcgcgccg attgggacgt cgtgggacaa tgatctctcc gttcgagcgc aggagaatga
     1501 tccattccgg cggcgcaatt caagccttac gcctggtttc tcggcggctg cgcgcgccct
     1561 cttgtcggtc gccgcgcgcg cccctaaaag cttgcccgta tgcaggaggc caacatgcga
     1621 ccgagccgcc gacagcccga cgagctgcgc gcgatctcgc tcgagcgcgg cgtcgtgaaa
     1681 tatgccgagg ggtcctgctt cgtaaagttc ggcgacacgc atgttctggt gacggcgacg
     1741 ctcgaggatc ggctgccgcc ctggctgaaa gggcaggcgc gcggctgggt caccgccgag
     1801 tacggcatgt tgccgcgcgc cacctcggag cgcacgcggc gcgaggcgtc agccgggaag
     1861 caaagcgggc gcaccatcga gatccagcgg ctgatcgggc gcagtctgcg cgcggtgctc
     1921 gatctgccca cgctcggcga gcggcaggtt acgatcgact gcgatgtgat ccaggctgac
     1981 ggcggaaccc gcaccgcggc gatcactggc gcctgggtcg ccctgcacga ctgcatcaac
     2041 tggatgaagg cgcgcgagat ggtaacgggg gagccgctgc gcgaccatgt cgccgccatc
     2101 tcctgcggca tctgcaacgg cacgccggtg ctcgatctcg attacgcaga ggattcggag
     2161 gccgacaccg atgccaactt cgtcatgacg ggcgcaggtc ggatcgtcga ggtacagggg
     2221 actgccgagc gaaccccctt cacggaagaa cagttcctca atctgcttgt gctcgccaag
     2281 aagggcgtga tgaaactcgt cgacctgcaa aaactggcgg tgatgtgagc acctcgcgcg
     2341 agctcgtgac gacgtcaaag ggcgcacatc ggcggctcgc cggccgtctc gtgattgcca
     2401 cccacaatcc gggcaagctc gaggaaatgc gcgagcttct gatgccgttc ggaatcgata
     2461 ccgtgtccgc cagggagctt ggcctgcccg agccggcgga ggacggcacg accttcaagg
     2521 agaacgcgcg cctgaaggcg cgcgccgcgg caacg
//
LOCUS       DATCWM010000433         2224 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_46344, whole genome shotgun sequence.
ACCESSION   DATCWM010000433 DATCWM010000000
VERSION     DATCWM010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2224
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46344"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..208)
                     /locus_tag="VIQ50_08410"
     CDS             complement(<1..208)
                     /locus_tag="VIQ50_08410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008547851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ClpX C4-type zinc finger protein"
                     /protein_id="HEY9360441.1"
                     /translation="MSKVTDKDTKNTLYCSFCGKSQHEVLIAGPTVFICDECVELCKD
                     IIHEENKSSLVKPRDGIPNPKEICK"
     gene            325..2103
                     /locus_tag="VIQ50_08415"
     CDS             325..2103
                     /locus_tag="VIQ50_08415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014001292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HEY9360442.1"
                     /translation="MFIDHVVLCRYIVAMYIESVPNRNSPPAILLRESFRDGAKIKKR
                     TIANLSDWPAELVEGLRTLLKGGTATPADRESIIVRRALPHGHVAAVLGTLRAIGLDR
                     ILGPSGNRPRDLVIAMIVVRLIAPASKLATARMLDPATAASSLGDILGLGAIDEDELY
                     AAIDWLGERQGAIEQALARKHLRDGTLVLYDVSSSYLEGRCCELARLGYNRDGKKGKL
                     QIVYGLMCAPDGCPVAIEVFEGDTGDPATLAAQIDKIKARFALKHVVLVGDRGMITQT
                     RIDEDIVPAGLDWITALRAPAIRALVEAGELQLSLFDRRDIAAITSPDYPGERLIVCR
                     NGELAAERRRKRVDLLAATERDLAVIAAAVARARQPLRGKDQIGLKVGAVVNRYKMAK
                     HFELDIGEATFAFRRKTDVIAAEAALDGFYVVRTNLPKRVLGDAATVGAYKSLAQVER
                     AFRSLKTVDIHLRPIFHWTAPRVRGHVLLCMLAYHVEHHMRARLAPMLYDETDHEAAA
                     AKRASIVAKAERSDAANRKQTTGRTADGLPVHSFQTLLADLATYCRIQATTALNEKYL
                     FTLHTRPTPIQQRAFELLGINPDRTQ"
BASE COUNT          397 a          760 c          656 g          411 t
ORIGIN      
        1 ccttgcagat ttccttcggg ttcggaatgc cgtcccgcgg cttcaccagc gaggacttgt
       61 tctcctcgtg gatgatgtcc ttgcatagct cgacgcattc gtcgcagatg aacacggtcg
      121 ggccggcgat gagcacctca tgctggctct tgccgcagaa cgagcagtag agcgtattct
      181 tcgtatcttt gtcggtgacc ttgctcatcc tcaccttccg tcgctaggct agcccgaact
      241 tccctctatc gaaatccata aagccttgga cttgatgaag ttcccggaaa atggccagca
      301 aaatgtagcc atgtaaatgg taaaatgttt attgatcatg tggtgttgtg tcgttatatt
      361 gtcgccatgt atatcgaatc ggtcccgaac cggaattcgc cgcccgccat cctgctgcgc
      421 gagagctttc gcgacggcgc caagatcaaa aaacgcacca ttgccaatct gtcggattgg
      481 ccggccgaac tcgtcgaggg gctgcgcacg ctgctcaagg gcggcaccgc gacgccggcc
      541 gaccgggaga gcatcatcgt gcggcgggcc ttgccgcacg gtcatgtcgc cgctgtgctc
      601 ggcacgctgc gcgccatcgg gcttgatcgc attctcggtc cgtccggcaa ccggccgcgc
      661 gatctcgtca ttgcaatgat cgtggtgcgg ctgatcgcgc cggcctccaa gctcgccacc
      721 gcccgcatgc tcgatccggc gactgccgct tcaagtctcg gcgacattct tggtctcggc
      781 gccatcgatg aggacgaact ctacgccgcc atcgactggc tcggcgagcg ccagggcgcg
      841 atcgagcagg cgcttgcccg caagcatctg cgcgacggca cgctggtgct ctacgacgtg
      901 tcgtcgagct atctggaggg gcgctgctgc gaactcgccc ggctcggtta caatcgcgac
      961 ggcaagaagg gcaagctgca gatcgtctac ggcctgatgt gtgcgccaga cggctgccca
     1021 gtggcgatcg aagtgttcga gggcgatacc ggcgacccgg cgacccttgc ggcgcagatc
     1081 gacaagatca aggcgcgctt cgccctcaag catgtggtgc tggtcggcga ccgcggcatg
     1141 attacgcaaa cgcgcatcga cgaagacatc gtgccggccg gcctcgactg gatcacggcg
     1201 ctgcgcgctc cggccatccg cgcgctggtc gaggccggcg aattgcagct gtcgctgttc
     1261 gaccggcgcg acattgcggc gatcacctcg cccgattatc cgggcgagcg gctcatcgtc
     1321 tgccgcaacg gcgaactcgc cgccgagcgc cgccgcaagc gtgtcgacct gttggccgcg
     1381 accgaacgcg atctcgccgt catcgccgcc gccgtcgcgc gcgccaggca gccgctgcgc
     1441 ggcaaagacc agattggcct caaggtcggc gccgtcgtca accgctacaa gatggccaag
     1501 cacttcgaac tcgacatcgg cgaggcgacc tttgcgttcc gccgcaagac cgatgtcatc
     1561 gcggccgagg cggcgcttga cggcttctac gtggtgcgca ccaacttgcc caaacgggtt
     1621 ctcggcgatg ccgcaaccgt cggcgcctac aagtcgcttg cccaggtcga gcgggcgttc
     1681 cgctcgctca agaccgtcga catccatctg cggccgatct tccactggac cgcgccgcgg
     1741 gtgcgcggcc acgtcctgct atgcatgctc gcctatcatg tcgagcatca catgcgcgcg
     1801 cggctcgccc ctatgctcta cgatgagacc gatcacgagg ccgctgccgc caagcgcgcc
     1861 agcatcgtcg ccaaggccga gcgctccgac gccgccaacc gcaagcagac caccggacgc
     1921 accgcggacg gtctgccggt gcacagcttc caaaccctcc tcgccgacct cgccacctat
     1981 tgccgcatcc aggccaccac cgccctcaac gagaaatacc tcttcaccct tcacaccagg
     2041 ccaaccccga tccagcaacg cgccttcgaa cttctcggta tcaacccgga tcgtacccag
     2101 taactgcccc cgcgctcgcg acaaacaaac gcgagttcag tgggttatcg attccgcaag
     2161 aaggaagttc gggctagatc gagggctgct gaggccattt gctgcggtgc atgagtctct
     2221 tgtt
//
LOCUS       DATCWM010000434        12300 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_418939, whole genome shotgun sequence.
ACCESSION   DATCWM010000434 DATCWM010000000
VERSION     DATCWM010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 12300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12300
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_418939"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..200
                     /locus_tag="VIQ50_08420"
     CDS             <1..200
                     /locus_tag="VIQ50_08420"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEY9360443.1"
                     /translation="RKEYTVIGDTVNLASRIEGLNKQFGSQLLISDAVRQAIGEDGDA
                     TPLGDVPIRGYEQPIRVWRLA"
     gene            complement(291..1067)
                     /locus_tag="VIQ50_08425"
     CDS             complement(291..1067)
                     /locus_tag="VIQ50_08425"
                     /inference="COORDINATES: protein motif:HMM:NF014069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEY9360444.1"
                     /translation="MGPHAASRPLSLSEQADELEERMMNELNDKIATKSALFNLADGN
                     FDYIGGAELQARNPGKYFLMGADPRLPKMPDKPTLIDFFKHRFVSMNHLLQSATLALK
                     AGHEEKVVLACLLHDVGVAGFIRCDHGYWGAQLIEPYVDEEVSWAVRVHQALRFFPDE
                     SAGYKYPDMYLKYFGPDYKPEPYIVEEYKRARVHKYYMTARLICVNDIYAFDPDAKVN
                     LDDFVDIIGRNFKQPKEGLGFDNTPSSHMWRTMMWPTRFL"
     gene            1226..1996
                     /locus_tag="VIQ50_08430"
     CDS             1226..1996
                     /locus_tag="VIQ50_08430"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9360445.1"
                     /translation="MPHIEVRNVSLTYDTPAGEVPAVAGVSFDIEASEFLCLVGPSGC
                     GKSTLLNMIAGFLAPSAGEIRIAGQPVSGHGLDRGVVFQDFAQLFPWRTALGNVTFGL
                     EMKGVGKAEREAIALEQLKLVKLEKFVAAYPHHLSGGMQQRVAIARALAYNPAVLLMD
                     EPFAALDALTRDDMQRLLAEVWRETRKTVVYVTHNVAEAVYLADRVLVMTPHPGMVKS
                     EVRIALPRPRDPLSVEFLQYQKSLLRHLGQDARAADAG"
     gene            2035..3018
                     /locus_tag="VIQ50_08435"
     CDS             2035..3018
                     /locus_tag="VIQ50_08435"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9360446.1"
                     /translation="MRNGRGELTRRQWLLASTLALALPARPAGALEMIRQGFQTNIWG
                     MPTYYLLKSGLLEKRGIKFEEFAVPSGNLTMQQMVARQVDLGTYAGQSFIIGHDKGAL
                     VAIAQIETVGKTAQVVTRKDLDIGKVSELKGRKVANQTGSSVGNIFMDVIAPAAGLKK
                     GDFQEVRMDVNNMVAAMAAKTVDAMVNVEPYNTIAVAEGIGTSIMDFSQVDKMPVFMA
                     ATPDFADKSPDTIVAYLKCWQEVARDFKDDPGKVTDVIYAFFTSKGYSMSRETFATAL
                     AKVEVNPGFPADLTPGLQKDAEVLLREKKISAIPDWKKALRPDLWARAASG"
     gene            complement(3170..4393)
                     /locus_tag="VIQ50_08440"
     CDS             complement(3170..4393)
                     /locus_tag="VIQ50_08440"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY9360447.1"
                     /translation="MTPSQALVQVNPAGLDPESLVPLPTQLEMKSPPADVPSSIARFH
                     GAWVGTWGDDLRHVLVVESVSPGGEAAVVFANADSPRYSVWANWERIEAAIGENGLRL
                     SLGYAEVSYEMDEPYRVIGTFTRKTGSVTSGLFTRLDASRLTSPHIVSTWQIPGERVY
                     IANTTASGMSPIKLETRLYRPKGNRSAPLAIFNHGSAIGRERFDSYSYFSEARWLLDN
                     GFAVLVPMRRGRGLSEGVYGEATYGTSRTGQIIDVCQSINEAIEDLEAAISFGRTLPF
                     VQQGPILLLGQSRGGFLSVIYAGRKPEDVLGVVNFVGGWMGGEELEHLNTPYFIQAGT
                     GAGARVPQLWLYAESDSFYSEAHVRANHAAFQAAGGLAKFEYYRGIPTDGHRLRNFPD
                     RWRPAADEFLSGLNR"
     gene            4704..7256
                     /locus_tag="VIQ50_08445"
     CDS             4704..7256
                     /locus_tag="VIQ50_08445"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014498539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan phosphorylase"
                     /protein_id="HEY9360448.1"
                     /translation="MDGPRFARQFESGTANQTDSGDLLRRSTTEPQDDDLEEIKSTVL
                     AKLALDLGKDASVATERDWFVAAALAIRDRIVHRWLAVDRSSHAQGRKRVYYLSLEFL
                     IGRLFADVLCNLGCTETFRAALGDLGVDLNRLRAAEPDAALGNGGLGRLAACFMESMA
                     TLEIPAYGYGIRYDHGLFRQVIRDGRQQEYPEEWLSFGNPWEFARPEVIHDIQFGGSV
                     ETTVSPTGLKRSVWHPAETIEAVAYDIPIVGWRGRHVNPLRLWSARAVDPLRLDAFNM
                     GDHVGALSEQTRAEAISKILYPSDSTPAGQELRLRQEYFFVSASLLDLVQRHLKTDGN
                     LYLLPLLCAIQLNDTHPSIAIPELMRILVDLHGLPWDEAWRITVGTCSYTNHTLLPEA
                     LETWPIDVFGRVLPRHLEIIYRINTEHLAAAKLKHPSASVSLESISLIDERDGRKLRM
                     GHLAFVGSHRTNGVSALHTNLMRQTVFRELHAVYPDRIVNKTNGITFRRWLLQANPDL
                     TRVLCEVCSDAVLDDPTQISRLADHADDAAIQERVRAAKRVNKVALARLIGERLTLRV
                     NPDALFDVQIKRIHEYKRQLLNLLETVALYHAMKAEPTRDWVPRVKIFAGKAAANYAQ
                     AKLIIKLINDVAEVINGDPTVRDLLRVVFLPDYNVSLAERIIPAADLSEQISTAGMEA
                     SGTGNMKLALNGALTIGTLDGANIEIRDHVGAQNIFIFGLRAEEVEERRRAGLQANSA
                     IASSPELAQAIEAIETGVFSPDDTDRFAALMSALRHSDYYMVAVDFAAYWSTQRSVER
                     LWLSTSDWTRASIFNIARMAWFSSDRTVGEYAHDIWKVPFELPSTRELEQPS"
     gene            7388..8554
                     /locus_tag="VIQ50_08450"
     CDS             7388..8554
                     /locus_tag="VIQ50_08450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008195992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbfB/YjiJ family MFS transporter"
                     /protein_id="HEY9360449.1"
                     /translation="MQIKPQGAKSIAQSRAVSTALGGLIAVAAALGVGRFVYTPILPV
                     MIEALGLSRSQAGLIASANFLGYLIGAFLAAMPHLSGPRRLWLIGSLAASVATTAGMG
                     LSQSLAALLVLRFVGGAASAFVLIFSSTIVLERLAQLGRNELSALHFAGVGTGIAVSA
                     ALVAGLLELGQGWQSLWLASGALAFVAAVAAAALLPTLPSPATQTAGTASTVADARLR
                     RLIVAYGLFGFGYIITATFLVAIVRATPAIQAQEPVIWIVFGIAAVPSVGFWTLLASR
                     FGIQAAFAIACIVEAMGVLASVVWPSVLGVFLAAILVGGTFMGLTALGLIGARARAVG
                     DPRRVLALMTGAFGLGQIVGPFFAGIASDRLGSFTAPSIVAALALILAALLTAT"
     gene            complement(8597..9091)
                     /locus_tag="VIQ50_08455"
     CDS             complement(8597..9091)
                     /locus_tag="VIQ50_08455"
                     /inference="COORDINATES: protein motif:HMM:NF014376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY9360450.1"
                     /translation="MGDFAKGVVIALGPEGGESFWQPLPSTGYVINKISPYNSPYDAF
                     STGLQVLEPGAHIRRHAHERSHELLFCYQGSGQADVEGKLYEVVPETMILIGRGLQHK
                     VTNTGAGQMRLLWFIAPAGLEDWFRAIGRPRRAGEPRPAPFERPNNIAAIQAQQRFIP
                     PDKD"
     gene            complement(9194..10690)
                     /locus_tag="VIQ50_08460"
     CDS             complement(9194..10690)
                     /locus_tag="VIQ50_08460"
                     /inference="COORDINATES: protein motif:HMM:NF023222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase N-terminal
                     domain-containing protein"
                     /protein_id="HEY9360451.1"
                     /translation="MLMSGKEYLQSIRDGRIIYVGKERVKDQTTHPAFADGARTYAAL
                     FDMKSDPALRDVMTFEEAGERYSMYYLQPRSQEDLRRRNRAHRKIADFCFGLMGRTPD
                     AFAGNLTGLSMKPEVFDSEPGGSRNNLLAIYQHIRRNDLFATYAIVPPQGARNKDYYL
                     AKGLPQPALRVTAEDEKGVTLNGMKMLASGAAYAHEVLIGNVMPLAPDQLKESITCVI
                     PLNLPGLTLWSREPFNRLGMTRFDRPLTRCFDESDCMLVFKDVKVPWEKVIVHDNPGL
                     SRDIYIKTAAHVISNHQSNVRFGSKLRFMLGVASLIARFTGARDIPAVRDTLGRLAAM
                     ETGYNAMIDGQIEACQPFDNGFVIFNRRYMYAAIHWAMENHSQLMDIIRELMGGGQFQ
                     FPASIDVLEDPELRELFETFWTAGDFAAADRMKLFKLAWDLVGSDHASRATSYEKFFV
                     GPGFAVRNYNFVNAPWDELHAAIEGFMGTYGTGELAADMPPVHLRRTS"
     gene            10909..12267
                     /locus_tag="VIQ50_08465"
     CDS             10909..12267
                     /locus_tag="VIQ50_08465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018701191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360452.1"
                     /translation="MKVRRKKVAKKVARAKKAARTKKPAKAAAPKRRASAQATGKRAA
                     APSPRGNGGPITWNFKLIAHHLLDGFGGMGEGMSIQIAPDGRRILWLAHESAPKNFTA
                     VDVSDPRKPKVVVQTNLPQAHMRSNSLETCGNIMAVAYQTQKTGLTPAGMELFDISVP
                     ERPRSISFFDCSGATSRGVHQLWFCDGEYVHCASGAPDFTPTHPNDDQFYRCIDVRNP
                     SKPVEIGRWWMPGTRQGDNVRPPPRHPLDKGHRAHNTNVYPQRGDRCYLAYIDGGMFI
                     LDISDKANPKRISQWTNSPPYTGFMHTVMPLFDRGLMLVTDESTENNAKDWPKLIWVL
                     DAREESNLVPIATCPLPDHKAFAAKGRFGAHNIHENVPLPTAWQSDQIVLGTFFNGGL
                     RAYDISNPYQPQQVGVFVPPAPPMAPTGTIQLNDVFVDEREIVYTVDRHAGGLYILEM
                     DF"
BASE COUNT         2280 a         3857 c         3829 g         2334 t
ORIGIN      
        1 ggcgcaagga atacaccgtg atcggcgaca cggtgaattt ggcctccaga atcgagggcc
       61 tcaacaaaca attcgggtcg cagcttttga tatccgacgc ggttcggcag gcgatcggcg
      121 aagatggcga cgcgactccg ctcggagatg tgccgatccg cggctatgag cagccgattc
      181 gcgtgtggcg tttggcgtaa acgccgtggt caccacccga ttatcgcgtg ggcacggcgc
      241 ctacgcgatt ttgcccacgc gcgcgtccgg agcgcgcgcc tttgcccacc ctacaagaac
      301 cgcgtcggcc acatcatcgt gcgccacatg tgcgacgacg gggtgttgtc gaagccgagg
      361 ccttctttcg gctgcttgaa attgcggccg atgatgtcga cgaagtcatc gaggttgacc
      421 ttggcatccg gatcgaacgc atagatgtcg ttcacgcaga tcagccgggc ggtcatgtaa
      481 tatttgtgga cgcgggcgcg cttgtattcc tcgacgatgt agggctcggg cttgtagtcg
      541 gggccgaaat atttgaggta catgtccggg tatttgtagc cggcggactc gtcggggaag
      601 aagcgcaagg cctggtgcac gcgcaccgcc caactcacct cctcatccac gtagggctcg
      661 atcagctgcg cgccccaata gccgtgatcg cagcggatga agccggcgac gccgacgtcg
      721 tggaggaggc aagccagcac gaccttctcc tcgtggccgg ccttgagcgc cagcgtcgcg
      781 ctttgcaaga ggtggttcat cgacacgaac cggtgcttga agaaatcgat cagcgtcggc
      841 ttgtccggca ttttgggcag ccgcggatcg gcgcccatca ggaaatactt gcccggattg
      901 cgcgcctgca gctcggctcc gccgatgtaa tcgaaattgc cgtcggccag gttgaacagc
      961 gccgatttgg tggcgatctt gtcgttgagc tcgttcatca tcctttcttc gagctcgtcc
     1021 gcctgctccg acaaagacaa cggcctcgat gcggcgtgcg gtcccatgtg acggctcctg
     1081 gtaaatgctc gcgccttgcg gcgaattgtc cgatctcgtt agcgcctgtc tacacccgat
     1141 tcgaatcgag tgaaactctt cccggccgcg atcgccgcgt ctggcgacaa acgagcatac
     1201 catctatgac agcagcacgc aggtcatgcc gcatatcgaa gtccgcaacg tttcgctcac
     1261 ctacgacacc ccggccgggg aggttccggc cgtggccggc gtcagcttcg acatcgaggc
     1321 ttcggaattc ctttgcctcg tcggcccttc gggttgcggc aagtcgaccc tgctcaacat
     1381 gatcgccggt tttctcgccc cgagcgccgg cgagatccgc atcgccggcc agccagtcag
     1441 cggccacggg ctcgaccgcg gcgtcgtgtt ccaggacttt gcccagctgt tcccgtggcg
     1501 caccgcgctc ggcaacgtga ccttcgggct cgagatgaaa ggggtgggca aggccgagcg
     1561 cgaggcgatc gcgctcgaac aactcaagct ggtcaagttg gagaaattcg tggccgcgta
     1621 tccacaccat ctgtcgggcg ggatgcagca gcgggtcgcc atcgcgcggg cgctcgcgta
     1681 caatccggcg gtgctgctga tggacgagcc gttcgcggcg ctcgacgcgc tcacccgcga
     1741 cgacatgcag cgcctgctcg cggaggtttg gcgagagacg cgcaagaccg tggtctacgt
     1801 cacgcacaac gtggcggaag cggtttacct tgcggatcgc gtgctggtca tgacgccgca
     1861 tcccggcatg gtgaagagtg aggtacgcat tgcgctgccg cgcccgcgcg atccgctcag
     1921 cgtcgaattc ctgcagtatc agaaatcgct gctgcgccac ctcggccagg atgcacgcgc
     1981 agccgacgcg ggatagaatc accgaaataa caatcgtcac cagggaggaa agtgatgcgc
     2041 aatgggcgcg gtgagttgac gcggcggcaa tggttactgg caagcacgct ggcgctggcg
     2101 ctgccggcgc ggccggctgg cgccctggag atgatccgcc aagggttcca gaccaacatc
     2161 tggggcatgc cgacctacta tctgctcaaa tccgggctgc tcgagaagcg cggcatcaag
     2221 ttcgaggaat tcgccgtgcc gtcgggcaat ctcaccatgc agcagatggt ggcccggcag
     2281 gtcgatctcg gcacttacgc cggacagtcc ttcatcatcg gccacgataa aggcgcgctc
     2341 gtcgccatcg cccagatcga aaccgtgggc aagaccgcgc aggtcgtgac gcgcaaggac
     2401 ctcgacatcg gcaaagtgag cgaactcaag gggcgcaagg tcgcgaacca gaccggctcc
     2461 tccgtcggca atatcttcat ggacgtcatc gcgcccgccg ccggcctcaa gaagggcgat
     2521 ttccaggagg tgcgcatgga cgtcaacaac atggttgcgg ccatggctgc caagaccgtg
     2581 gacgcgatgg tcaacgtcga gccctacaac acgatcgcgg tcgccgaggg catcggcacc
     2641 tcgatcatgg atttctcgca ggtcgacaag atgccggtgt tcatggcggc gacgcccgat
     2701 ttcgccgaca agagccccga cacgatcgtc gcctacctca agtgctggca ggaggtggcg
     2761 cgcgacttca aggatgatcc cggcaaggtg accgacgtga tctacgcgtt cttcacctcc
     2821 aagggctaca gcatgtcgcg cgagaccttc gccacggcgc tggccaaggt cgaggtcaat
     2881 ccgggctttc ccgccgacct cacaccgggc ctgcagaagg atgctgaggt gctgttgcgg
     2941 gagaagaaga tctccgccat tcccgactgg aagaaggccc tgcggcccga tctgtgggcc
     3001 cgggcggcga gcgggtgagg cgcatcccct cgcctttcct tcctgctgca acagtgacgc
     3061 tgggcgactt ctctatcgga aaatccccgc gtcgaagcgt caaactaagt atcaaaccat
     3121 gccgaaagcg tcgcggatcc acagcgcaag ccgtgacgca accctgagtt cagcggttca
     3181 atccgctcaa gaactcgtcg gcggcgggtc gccagcgatc aggaaagttc cgcagcctgt
     3241 gcccgtccgt tgggatccca cgatagtatt cgaacttagc caatccgccc gccgcttgga
     3301 acgcggcatg attcgcccgc acatgggcct cgctgtagaa gctgtcggat tcagcgtata
     3361 gccagagctg cggaaccctc gctcccgcgc ctgtgcccgc ttggatgaag tagggcgtat
     3421 tgaggtgctc caattcctca ccgcccatcc agccgccgac aaagttcacg acgccgagca
     3481 cgtcttcggg tttgcgtccg gcatagatca cggaaagaaa accgccccgc gactgaccaa
     3541 ggagaaggat cggtccttgc tggacgaacg gcagcgttcg gccaaacgaa atcgcggcct
     3601 cgaggtcctc aattgcttcg ttgatacttt ggcagacgtc gataatttgc cccgtgcggc
     3661 tcgtgccata ggttgcctcc ccataaactc cttccgacag accgcgcccg cgtcgcatgg
     3721 gaacgagcac ggcgaagccg ttgtcgagca accatcgcgc ctcactaaaa tacgaatagc
     3781 tgtcgaatcg ctccctgccg atcgccgatc catgattgaa gattgccaac ggcgcggaac
     3841 ggttgccttt cgggcggtag agccgtgtct caagcttgat tgggctcatt ccactggccg
     3901 tggtattggc gatgtacacg cgctcgccgg ggatctgcca tgtgctcacg atgtgtggcg
     3961 atgtgaggcg cgacgcgtcc aaacgtgtga aaaggccgga cgtgactgac ccggtcttgc
     4021 gcgtaaaggt cccgatcacg cggtagggct cgtccatttc atatgagact tccgcgtatc
     4081 ccaatgatag gcgcagaccg ttctctccaa tcgcggcttc aatccgctcc cagtttgccc
     4141 atacggagta tctcggcgag tcggcgttcg cgaagaccac cgctgcctcg ccaccggggg
     4201 agacgctctc gacgaccagc acatgccgca gatcatcgcc ccaagtgccg acccatgcac
     4261 cgtggaaccg cgcaatactc gacggcacat ccgccggggg cgatttcatc tccaattggg
     4321 ttggcaacgg gaccaggctc tcgggatcga gccctgccgg gttgacttgt accaaggctt
     4381 gcgagggggt cattgccggg atcacgatta ccacgtccgg cccaaccagg gctcggtgcc
     4441 gacgcagggc cagtcgtttg gccgcttgca caaaattggg gcagggttgg agtgggaaaa
     4501 cgggcgactc tggaacttgt gcgttgtgga actcgaccca tagcgctgct catagcagga
     4561 ttgctatgag catgatggga cggcaggaat ctccggaggg tctgcgcgtt aatctagaga
     4621 aatgttagtt tttgccaacc acagtgaact cggtttcagc gccggctcga tcaggcaccg
     4681 gcggctgcgc aggaagcaag agcatggatg ggccacggtt tgctcgccag ttcgagtcag
     4741 ggacggcgaa ccagaccgat agcggcgatc tcctgaggcg ttccacaacc gaaccccagg
     4801 atgacgatct cgaggaaatc aagagcaccg ttctcgccaa actggcgctg gacctgggca
     4861 aggatgcgtc tgtagcgacg gaacgagact ggttcgtcgc ggccgcgctg gccattcgcg
     4921 accgcatcgt ccatcgctgg ctcgcggtgg atcgctccag ccatgcacag ggtcgcaagc
     4981 gcgtctacta tctctccctg gagtttctta tcgggcgcct ctttgccgac gtgctctgca
     5041 atcttggttg cactgagacc tttcgggcgg ctctcgggga tctgggtgta gatctcaacc
     5101 ggttgcgcgc cgctgagccg gacgcagcat tggggaatgg cggacttggt cggcttgccg
     5161 cctgtttcat ggagagtatg gcgaccctcg aaattcccgc ctacggctac ggcattcgct
     5221 acgatcacgg actgttccgg caagtcatca gggacggccg gcagcaagag tatcccgaag
     5281 aatggctgtc cttcggcaat ccgtgggaat tcgcgcggcc ggaagtgatc cacgacattc
     5341 aattcggcgg ttcggtcgag acgacggttt cgcccacggg gctcaaacgt tcggtctggc
     5401 acccggccga gaccattgag gcggtcgcct atgatatccc gatcgtggga tggcgcggcc
     5461 gacacgtaaa tcccttgcgc ttgtggtccg cgcgagccgt cgacccgctg cgcctcgacg
     5521 cgttcaatat gggtgaccac gtcggcgcgt tgtcggagca gacgcgcgcc gaagcgattt
     5581 ccaagatcct ctaccccagc gattcaaccc cggcaggcca agagcttcgc ctgcgccagg
     5641 aatatttctt tgtttcagcc tcgctgttgg atctggtgca acgccacctg aagaccgacg
     5701 gaaatctcta tctcctgccc cttctctgcg cgatccaact caatgacacg catccgagca
     5761 tcgcaattcc ggagctcatg cgcatccttg tcgacctgca cggcctgccg tgggacgagg
     5821 cgtggcgcat cacggtcggc acttgttcct acaccaacca tacccttttg ccggaagcgc
     5881 tcgaaacctg gccaatcgat gtgttcgggc gcgttctccc gcggcatcta gagatcatct
     5941 atcgcatcaa cacggagcat cttgcggcag caaagctaaa acatccatcc gcttccgtct
     6001 cgctcgaatc gatttcattg atcgacgagc gcgatggtcg aaagttgaga atgggccacc
     6061 ttgcatttgt cggctcccat cgcaccaacg gggtctcagc gctccacacc aacctgatgc
     6121 gccagaccgt gttccgcgag ctgcacgcgg tctatcccga tcgcatcgtc aacaagacca
     6181 acggaattac attccgccgc tggctgctcc aagcgaaccc cgatctcacc agggtccttt
     6241 gcgaagtctg cagcgatgcc gttctggatg atcccacgca aatcagtcgc ctggccgacc
     6301 acgccgacga cgctgcgatt caggagcggg tcagggcggc caagcgcgtc aacaaggttg
     6361 ccctggcgcg actgatcggc gaacgcctca ccctgcgtgt gaacccggac gcgctgttcg
     6421 atgtgcagat caaacgcatc catgaataca agcgccaatt gctgaatctg cttgagacag
     6481 tcgcgctcta ccacgcgatg aaggccgagc cgacccgcga ctgggtaccg cgggttaaga
     6541 tatttgctgg aaaggcggca gcgaactacg cgcaagcaaa gttgatcatc aagctcatca
     6601 acgacgtggc cgaggtgatc aatggggatc caaccgttcg tgatctcctg cgggtcgtgt
     6661 tcctgcccga ttacaacgtc agtttggcag agcggattat tcccgcagcc gatctatccg
     6721 agcagatttc cacggctgga atggaagcct ccggcaccgg caacatgaaa ttagctttga
     6781 acggtgcgct cacgataggc acgctcgatg gcgcaaatat cgagattcgc gatcacgttg
     6841 gcgcacagaa catcttcatc ttcggcttgc gggcggagga ggtcgaggag cgtcggcgcg
     6901 caggcctgca agcaaattca gcgattgcat cgtctcctga actcgcgcag gccatcgagg
     6961 cgattgagac cggtgttttt tcgcccgacg ataccgaccg gttcgccgcg cttatgagcg
     7021 cgctccggca ttccgactac tacatggtgg ccgtggattt cgctgcttat tggtcaacgc
     7081 aaagaagcgt cgaaaggctg tggctgtcga cctctgattg gacccgcgcg agtatcttca
     7141 atattgcacg aatggcgtgg ttctcctccg accgcaccgt cggtgagtac gcccacgaca
     7201 tttggaaagt accattcgaa cttccctcca ctcgagagct agaacaaccg tcgtagatcg
     7261 aagacggggc aactgcggcg atacatgctg agcgccatca agaggcgtgg gttctttagc
     7321 gcccatgagc tcttcctgca ccgggacacg aagcggcggg ggacgttgga tcacgacgac
     7381 gtcggcaatg cagatcaagc cgcaaggagc caaatccatc gcacagtcga gggcggtctc
     7441 caccgcgctc ggcggattga tcgccgtcgc tgccgcgctc ggcgttggac gcttcgtcta
     7501 cacaccgatt ctgccggtga tgatcgaggc gttggggctt agcaggtcgc aagctggcct
     7561 gatcgcctcg gcaaatttcc tgggctactt gatcggtgct ttcctcgcgg caatgccgca
     7621 cctgagcgga ccgcggcggc tgtggttgat tggttcgttg gcggcgagcg ttgccaccac
     7681 cgcgggcatg gggctgtcac agtcacttgc ggctttgctt gttctgcggt ttgtcggcgg
     7741 cgctgcgagc gcctttgtgc tgatcttctc ctcgaccata gtgctggagc gcttggcgca
     7801 gctcggccgc aacgaactct cggcattgca ttttgccggt gtcggcactg ggatcgcggt
     7861 gtccgcggcg ctggtggccg gattgctcga gcttggtcaa ggctggcaat cgctgtggct
     7921 cgcgagcggc gccctcgcgt tcgtggcggc cgtcgcggcg gcggcgctgc tgcctacttt
     7981 gccgagccct gcgacgcaga cggctggaac ggcgagcacg gttgccgatg cgaggttgcg
     8041 ccgccttatc gtggcctacg gcctattcgg cttcggctat atcatcactg ccacgttcct
     8101 cgtcgcgatc gtgcgagcga cgccggcgat ccaggcgcaa gagccggtca tctggattgt
     8161 atttggaatc gccgccgtac cgtcggtggg attttggact ctgctcgcga gtcgtttcgg
     8221 gatccaggca gcgtttgcaa tcgcctgcat cgttgaagcg atgggcgtgc tggcaagcgt
     8281 cgtttggccc agcgtgctcg gggtgtttct tgccgccatc ctcgttggcg ggacgttcat
     8341 gggactgacc gcgctcggac tcataggagc gcgcgcccgc gcggttggcg acccgcgccg
     8401 cgtcctcgcc ctgatgaccg gcgccttcgg tctcggccaa atcgtcggcc cgtttttcgc
     8461 cggcatcgcc tcggatcggc tcggcagctt caccgcaccc tcgattgtcg ccgcgctcgc
     8521 gctgatcctc gctgccttgc tcaccgccac gtaaccttct gtttgactga tctggctcgc
     8581 aacggcggtc cggcgctcag tccttgtccg gcgggatgaa gcgctgttgc gcctggatcg
     8641 ctgcgatatt gttcgggcgc tcgaacggcg ccggccgtgg ttcgcccgcc cgccgcgggc
     8701 gcccgatggc gcggaaccaa tcctccagac ccgccggcgc aatgaaccag aggaggcgca
     8761 tctggccagc gccggtgttc gtcaccttgt gctgcagtcc gcgaccgatg aggatcatgg
     8821 tctcgggcac cacctcgtaa agcttgccct cgacgtccgc ttgcccgctg ccctgataac
     8881 agaacagcag ttcgtggctg cgctcgtggg catggcggcg aatgtgggcg ccgggctcaa
     8941 gcacctgcag cccggtcgag aatgcatcat aaggcgagtt ataggggctg atcttgttga
     9001 tcacgtaccc ggtcgaaggc aacggctgcc aaaacgactc gccgccctcc ggccccagcg
     9061 cgatcaccac ccctttggcg aaatcaccca cgacggcctc ctagatcagg attgaattag
     9121 cccaaggctt tttgcgtcat ggcggcgacg cgattcggtg cgcctgctcg cgccccctgc
     9181 aagtgtttcc tcgtcagctt gtccgccgca gatgaaccgg cggcatgtcg gcggcaagct
     9241 ctccagttcc gtaagtaccc atgaaacctt cgatcgcggc gtgcaactcg tcccacgggg
     9301 cgttgacgaa attgtagttg cgcacggcaa agccagggcc gacgaaaaat ttctcatacg
     9361 acgtggcgcg gctggcgtga tccgaaccca cgagatccca ggcaagtttg aacagcttca
     9421 tgcggtcggc ggcggcgaaa tcgccggcgg tccagaacgt ctcgaacagc tcgcgcagct
     9481 cgggatcctc gagcacgtcg atgctggcag gaaactgaaa ttggccgccg cccatcagct
     9541 cgcggatgat gtccatcagt tgggaatggt tctccatggc ccaatgaatg gcggcataca
     9601 tgtagcgccg gttgaagatg acgaagccgt tgtcgaacgg ttggcaggcc tcgatctgcc
     9661 cgtcgatcat ggcgttgtag cccgtctcca tggcagcgag ccggccgagc gtgtcgcgca
     9721 ccgccgggat gtcgcgggcg ccggtgaagc gggcgatcag gctggcgacg ccgagcatga
     9781 agcgcagctt cgagccgaac cgcacgttcg actggtggtt ggaaatgacg tgcgcggccg
     9841 tcttgatata gatgtcgcgc gaaaggccgg ggttgtcgtg gacgatgacc ttttcccacg
     9901 gcactttcac gtccttgaac accagcatgc agtcggactc gtcgaagcat cgcgtgagcg
     9961 ggcggtcgaa gcgagtcatg cctaagcggt tgaacggctc gcgcgaccag agcgtcaggc
    10021 cgggcagatt gagcgggatg acgcaggtga tggattcttt gagctggtcg ggggcgagcg
    10081 gcatcacgtt tccgatcagc acctcgtgcg cgtaggcggc gccgctcgcc agcatcttca
    10141 ttccgttgag cgtgacgccc ttctcgtctt ccgcggtcac ccgcagtgcc ggttgcggca
    10201 gccccttagc cagatagtag tccttgttgc gcgccccttg cggcgggacg atcgcgtagg
    10261 ttgcgaacag gtcgtttcgc cggatgtgct ggtagatggc caacagattg ttgcggctgc
    10321 cgccgggctc gctgtcgaac acctcgggct tcatggaaag gccggtgaga ttgccggcga
    10381 acgcgtcggg cgtgcggccc atcaggccga agcagaagtc ggcgatcttg cggtgggcgc
    10441 ggttgcggcg ccgcaggtcc tcctgcgagc gcggctgcaa gtagtacatg ctatagcgct
    10501 cgcccgcctc ctcgaacgtc atgacgtcgc gcagcgccgg atcggatttc atgtcgaaca
    10561 acgcagcgta ggtacgcgcg ccgtcggcga aggccgggtg tgtcgtctga tctttgaccc
    10621 gctccttgcc gacatagatg atccggccgt cgcggatgct ctgcaaatat tcctttccgc
    10681 tcatgagcat gggaatgaac cgtttgatct gacgttgcga acggcgtcgg gccgccgcga
    10741 atgatagcga gtttcccgcc ggctcgaaat ggaagtcgac ccggaggggc cgtcatggcc
    10801 gaaccgaccg agtcccgcgc tggagcgcat ggctaacctt caccacgccg cctcgcccgg
    10861 cgcgctgaaa cgcgctagac atgcgcgcgc ttaggcaggg agagtggaat gaaggttcga
    10921 cgcaagaagg tcgcgaagaa ggttgcgaga gcgaagaagg ctgcgaggac gaagaaaccg
    10981 gcgaaggcag ccgcgccaaa gaggcgcgcg agcgcgcaag ccacgggcaa gcgcgcggcg
    11041 gcaccaagcc cgcgcggcaa cggtggaccg atcacgtgga acttcaagct catcgcccat
    11101 cacctgctcg acggcttcgg cggcatgggc gaaggcatgt cgatccagat cgcgccggac
    11161 ggccgccgca tcctctggct cgcgcacgaa agcgcgccga agaacttcac cgccgtcgac
    11221 gtgtcggacc cacgcaagcc caaggtggtg gtgcagacca atctgccgca ggcgcacatg
    11281 cgctcgaatt cgctcgagac ctgcgggaac atcatggcgg tggcttacca gacccagaag
    11341 acgggcctaa cgcccgccgg catggagctg ttcgacattt cggtgccgga aaggccgcgg
    11401 tcgatctcgt tcttcgactg ctcgggcgcg acctcgcgcg gcgtgcatca gctctggttc
    11461 tgcgacggcg aatacgtgca ttgcgcgtcc ggcgcgccgg acttcacgcc cacgcatccc
    11521 aacgacgacc agttctatcg ctgcatcgac gtgcgcaacc cgtcaaagcc ggtcgagatc
    11581 ggccgctggt ggatgccggg cacgcgtcaa ggcgacaacg tgcggccgcc gccgcggcac
    11641 ccgctcgaca aggggcaccg cgcccacaac accaacgttt atccccagcg cggcgaccgc
    11701 tgctacctcg cctatatcga cggcggcatg ttcatcctcg acatttccga caaggcgaac
    11761 cccaagcgca tctcgcagtg gaccaattcg ccgccgtata ccggattcat gcacaccgtg
    11821 atgccgctgt tcgaccgcgg gttgatgctg gtgaccgacg aatccaccga gaacaacgcc
    11881 aaggattggc cgaagctgat ctgggtgctc gacgcgcgcg aggaatcgaa cctggttccg
    11941 atcgccacct gcccgctgcc ggatcataag gcgttcgccg cgaagggccg cttcggcgcc
    12001 cacaacatcc acgagaacgt gccgctaccg accgcctggc aatccgatca gatcgtgctc
    12061 ggcaccttct tcaacggggg gctgcgcgcc tacgacattt ccaatccgta ccagccgcag
    12121 caggtcggcg tgttcgtgcc gccggcgccg ccaatggcgc ccaccggcac catccagctc
    12181 aacgacgtgt tcgtcgacga gcgcgagatc gtctacaccg tcgaccgcca cgccggcggg
    12241 ctctacatcc tggagatgga tttttgaccg cgtgttgtgt cccgggcgca gcgcagcacg
//
LOCUS       DATCWM010000435         7117 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_137998, whole genome shotgun sequence.
ACCESSION   DATCWM010000435 DATCWM010000000
VERSION     DATCWM010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7117
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137998"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..354
                     /locus_tag="VIQ50_08470"
     CDS             <1..354
                     /locus_tag="VIQ50_08470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEY9360453.1"
                     /translation="PAATATAKGDQWAFRLYAVRFGTDVYRFIFASKRMTAETDRAFR
                     ESVGTFRRMTLAESQAAKPLHIKIVTVASGDTVERLASRMAIADRAVERFRVLNGLGP
                     NDRLSAGDQVKIVVE"
     gene            complement(548..769)
                     /locus_tag="VIQ50_08475"
     CDS             complement(548..769)
                     /locus_tag="VIQ50_08475"
                     /inference="COORDINATES: protein motif:HMM:NF024879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper domain-containing protein"
                     /protein_id="HEY9360454.1"
                     /translation="MSNMSNMSDDETKAVGMWDRTKAWADKNRTISGALVGGAAGTIV
                     PGLGTLIGAIVGAGVGFASSKEKDKKEEH"
     gene            complement(924..1526)
                     /locus_tag="VIQ50_08480"
     CDS             complement(924..1526)
                     /locus_tag="VIQ50_08480"
                     /inference="COORDINATES: protein motif:HMM:NF024809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEY9360455.1"
                     /translation="MKLYVTYTSPYARLARIVVLEKKLEGRAEILEARTRTAGSPYYQ
                     INPSGRVPYLIDPAGIGMEDSQLICAYLDSLDDKPRFHHHLRDFHWDYRRLEASARSM
                     CEGICVWVREMARPESERSPTVLAHEVARSQRMADFFETRAADPLMQAELGMAHLTVA
                     VSLDMARKRGPGDLTTERPRLTAWMRRMSDLPAIRATALP"
     gene            1687..2568
                     /locus_tag="VIQ50_08485"
     CDS             1687..2568
                     /locus_tag="VIQ50_08485"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9360456.1"
                     /translation="MNIGFVGLGAMGAGIVPRLMTAGHTVTGWNRRKEKAEALIASGM
                     RYAPSPRAAAAGADVVFSIVTDAAAVNAVALGGDGIIAGLKSGAIYVDMSTISPDASR
                     AVSAEFAERDLTMLDAPISGSPITLAQGNAALMVGGDKAAFERVEPVLRAIGPKVTYV
                     GASGLAVQMKIAVNLLLMVEVIAFGEAVALAEKGGVAREIAVDAILKSVAASPVLAYR
                     GPFILEGKMPAVPLADVTLQQKDMLLALELGRKLGSPVPLAAAANEMMNACRGLGLDH
                     RDFVTAHEVYRRLGGQS"
     gene            2755..4074
                     /locus_tag="VIQ50_08490"
     CDS             2755..4074
                     /locus_tag="VIQ50_08490"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEY9360457.1"
                     /translation="MSGEGISTLAHRMINDVLRSSRRRFLTQVGAAGLGIGVPVSMTI
                     AQEMQRSLVGDGKEVSLGEKLARYATSLRYEDLPEDVIRIAKRTILDTLGCAFGGYSA
                     GPSKIAMKLASDVNSKQPGTILLSGIKTSPELAVFANGVMIRYLDFNDAYVSQMNGAG
                     HPSDTIAALLTAGELSQRSGRDLITATVLAYEVYCKIGDVFDYLGHGIDHTTVTGMGA
                     VVGAGKLLGLTPAEMVHAIGITVGGNTATRQGRADTLSNWKAYAAADACRKAIFSVQL
                     AGNGMTGPSNVFEGRYGFFKVMSRKPVASPQLGEPFGIRQCFTKRFPLGQFSQTVAQA
                     AVEARSYFKSPDEILEVNIHASRSAIKIMADGPDKWRPQTHETADHSIPYSAGLALMY
                     GKIDPDYYEDPYLHDPRLLDLVSRVKCLPSDEADQPEFANLCEGRLS"
     gene            4095..4280
                     /locus_tag="VIQ50_08495"
     CDS             4095..4280
                     /locus_tag="VIQ50_08495"
                     /inference="COORDINATES: protein motif:HMM:NF040249.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360458.1"
                     /translation="MRVEYHRGHFKNPMTDAEMEEKFRLMAQKHLPPDRVDGLLRIVW
                     NVETEPQVSNLIAATRV"
     gene            complement(4292..5239)
                     /locus_tag="VIQ50_08500"
     CDS             complement(4292..5239)
                     /locus_tag="VIQ50_08500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012043145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9360459.1"
                     /translation="MIARREFMLGAAAAGVLMQPRFGYAKASQPATNVNFDVPAGACD
                     CHTHIHGDPVKFPWFAGRTYTPETALPEEMGALHNALKIQRVVIVTPSVYGPDNSATI
                     YGMAARGKDARGVAVIDDKTTDAELDRLASLGFKGIRLNLSTAGINDPKVATERFLAA
                     AARVKSRDWHIQLNTTLPVIAAMKDTLAASPVTLVFDHFGNAKEELGVGQHGFSDLVS
                     LVKSGKAYVKISVTAGSRENYGYFTPLAQMLISANVDRILWGTNWPHPNSEDGSTSKI
                     TPLWQVDDGLVFNLLPTWAPDAAVRRKILVENPTRLYEF"
     gene            complement(5510..6508)
                     /locus_tag="VIQ50_08505"
     CDS             complement(5510..6508)
                     /locus_tag="VIQ50_08505"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9360460.1"
                     /translation="MRRREFIAMLGGAAVGWPLAARAQQSERMRRIGVLMGLDPGDPW
                     AATYLGALKGGLGALGWVEGQNLRIDVRAAGDLAGLHAQAQELLALGPELIVTYTTPA
                     ITLIRQAAPDVPVIFVAVSDPIGPGFVQSLARPGGNATGFINFEATMGSKWLELLRDI
                     APMVKRVAMLFNPATANTGATGGIYLPAMQAGARALGLELIVAPLNDPADIDGAYAAL
                     AQSPGGGASVMPSVFTARHRERIVAQAARHRIPTVYPLAHFVEIGGLLSYGIDYVDQF
                     KRAGAYADRILKGAKPADLPVEQPVKFELTINRNTAAALELSVPLALQVAADRLIE"
     gene            complement(6505..>7117)
                     /locus_tag="VIQ50_08510"
     CDS             complement(6505..>7117)
                     /locus_tag="VIQ50_08510"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9360461.1"
                     /translation="VELGLVSSLNRPGGNATGITTLAVEVAAKRLSLLRQLVPQALSI
                     ALLLKPTHPSAKQVSESLQAAAGKLGVQLDVLEASTDREIEDAYLALRPGDALLVATD
                     PFFFLRRAQLVALSARYGVPTIYDSREFGEAGGLMSYGPNRARLWEQAGTYVGRILKG
                     EKPSDLPVTQAAIFEMVINLKTGKTLGLNVPDRLLALADEVIE"
BASE COUNT         1284 a         2238 c         2282 g         1313 t
ORIGIN      
        1 ccggcggcga ccgcaaccgc caagggcgat cagtgggcgt ttcggctcta tgcggtgcgc
       61 ttcggcaccg acgtttatcg ctttattttc gcctccaagc gcatgacggc ggagaccgat
      121 cgcgccttcc gcgagtcggt cggcaccttc cgtcgcatga ccttggcgga aagccaggcg
      181 gccaaaccgc tgcacatcaa gatcgtgacg gtcgcgtcgg gtgacacggt cgagcgccta
      241 gcgagccgca tggcgatcgc ggaccgcgcc gtcgagcgct tccgcgtgct caacgggctt
      301 ggccccaatg atcgcctgag cgcgggcgac caggtcaaga tcgtggtcga gtaggcgggc
      361 aaaccctctc gctgcgtagg cgtgtactca cttcgtccag cgtgtccgtt ttcgggcgct
      421 ggcgcctaca tctgcgcggg gcaggcatat ctgcgcgcga gccgccggcc cgtccgtcct
      481 ggggacaggc gcggtgcgac ggcagcgccg ttgcggcgct gcgtttcggg gatcagccta
      541 gccgcggcta atgctcttct ttcttgtcct tctccttcga ggaggcaaat ccgacccccg
      601 cgcccacgat cgcgccgatc aaggtcccga gccccggcac gatggtcccg gccgcgccgc
      661 cgacgagcgc gccggaaatt gtgcggttct tatcggccca agctttggtc cggtcccaca
      721 tcccaaccgc ttttgtttcg tcgtcgctca tgttgctcat gttgctcatg gtgcttcctc
      781 ggtgaaaggg cagttgggat gttagcccat ccgccggacc ggcgcgacat ccctcttgcg
      841 ccggcggtgg ggtgccgaac ctcttccttc cggcccagtg aggcgcgaaa tcgacatacc
      901 cgccgaccaa ccgcgatcct gcattacggc aaggcggttg cccgtattgc gggcaggtcg
      961 gacatgcggc gcatccaagc ggtgaggcgt gggcgctcag tggtgagatc accgggaccc
     1021 ctctttcgcg ccatgtctag agacacagcg acggtcaggt gtgccatgcc cagctccgcc
     1081 tgcatcagcg gatccgccgc ccgtgtctca aaaaaatccg ccatgcgttg gctgcgcgcc
     1141 acctcgtgag cgaggacggt cggcgaacgc tcgctctcgg gccgagccat ctcacgcacc
     1201 catacgcaga tcccttcgca catgctgcgc gcgctagcct ccagccggcg gtagtcccaa
     1261 tggaagtcac gcaggtgatg gtggaaccgc ggcttgtcat cgaggctgtc gagataggca
     1321 cagatgagct ggctgtcctc catgccaatg ccggcggggt cgatgagata tggcacgcgg
     1381 cctgacgggt tgatttgata gtaggggctg ccagccgtcc gcgttctcgc ttccagaatc
     1441 tcggcgcggc cctccagctt cttctctaac acgacaatgc gcgccagccg cgcgtatggc
     1501 gacgtgtatg tcacatagag tttcatcgac gatggttctt tctgtgctca aggtgtcaca
     1561 agcgggcacc tctagattag cacacatagc aaggggctcc ccgcgtgtga gcacgcgacc
     1621 cagcctagcc tttgctgccg ttcggcggca tcatcgcgct tcacgtgatg ttgcgaggtc
     1681 aaaggcatga acatcggttt cgttgggctc ggtgcgatgg gtgccggcat cgtcccccgg
     1741 ctcatgactg ccggtcacac ggtcacgggt tggaaccggc gcaaggagaa ggccgaagcg
     1801 ctcatcgcct ccggcatgcg ctatgcgcca agcccgcgcg cggccgcggc gggtgcggac
     1861 gtcgtgttct cgatcgtcac cgatgcggcg gcggtcaacg cagtcgcgct cggcggcgac
     1921 ggcatcatcg ccggcctgaa aagcggcgcc atctatgtcg acatgagcac gatctcgccg
     1981 gacgcgagcc gcgcggtctc cgccgaattc gccgagcgcg acctgacaat gctcgacgcg
     2041 ccgatttccg gcagtcctat cacgctggcg caaggcaacg ccgcgctcat ggtgggcggc
     2101 gacaaggcgg ccttcgagcg cgtcgagccg gtgctgcgcg cgatcggccc caaggtgaca
     2161 tatgtcgggg cgagcggcct ggcggtgcag atgaagatcg ccgtcaacct gctgctcatg
     2221 gtggaagtga tcgccttcgg cgaggcggtt gcgcttgccg aaaaaggcgg ggttgcgcgc
     2281 gagatcgcgg ttgatgcgat cctcaagagc gttgccgctt cgccggtgtt ggcctatcgc
     2341 ggccctttca tcctggaggg aaagatgcca gcggtgccgc tcgccgacgt cacgctgcag
     2401 cagaaagaca tgctgctggc gctcgagctc ggccgcaagc tcggcagccc cgtgccgctc
     2461 gcggcggctg ccaacgaaat gatgaatgcc tgccgcgggc tcggcctcga tcaccgcgat
     2521 ttcgtgaccg cgcacgaagt ctatcgccgc ctgggcggcc agagctagcg cgcggcaccg
     2581 cgcgcgcctc gtcctcatcc cgaggagcgc gcatgtgaga tgcgcgacgt gcgtgcgcgc
     2641 gtcctgcctt cgagcgcgct cagtcgcttg ctggctcata tcgagaaatg tacgatttgt
     2701 gtgggcacca caccgggagg ggttgtgtgg gcaccacacc gggaggggtc gtggatgtct
     2761 ggcgagggaa tatccacgct cgcacacagg atgattaatg acgtgctgcg ctcttcacgc
     2821 cggcgcttcc ttacgcaggt gggtgcggcg ggattaggga taggtgtacc ggtctctatg
     2881 acgatagcgc aggaaatgca gcgttccctc gttggcgatg gcaaggaggt ttccctggga
     2941 gagaaacttg cccgctatgc gaccagcctc cgatatgagg acctcccaga ggatgtcata
     3001 cggattgcca agcgtaccat cctcgatacc ctcggctgcg cgttcggtgg ttactccgcg
     3061 ggaccgagca agattgcgat gaagctcgcg agcgacgtga attcaaagca gcctgggaca
     3121 atcttgctta gcggcatcaa gacgagcccg gaactggcgg tgttcgccaa tggcgtgatg
     3181 atccgctatc tggatttcaa tgacgcatac gtgagccaga tgaatggcgc cggtcatccc
     3241 agcgatacga ttgcggcgtt gctgaccgcg ggtgaactaa gtcagcgaag cggtcgggat
     3301 ctcatcaccg caaccgttct cgcttatgag gtctactgca agattggaga tgtgttcgat
     3361 tacttgggcc acggcattga ccacacgaca gtcaccggca tgggggccgt ggtaggcgcc
     3421 ggaaagctgc tgggactaac accggcagag atggtgcacg ccatcggcat cacggtcgga
     3481 ggcaacaccg ccacgcgcca aggtcgcgca gataccctct caaactggaa ggcttacgca
     3541 gcagccgacg cctgccgcaa ggcgatcttt tcagtgcagc tcgccgggaa cgggatgacg
     3601 ggcccaagta atgtcttcga ggggcgctac gggttcttca aggtcatgag ccgcaagccg
     3661 gtcgcgtcac cacagctcgg cgagccgttc gggatccgcc aatgcttcac caagcgcttt
     3721 ccacttggcc aattttccca aactgttgcg caagccgccg tggaagcaag gtcgtatttc
     3781 aagagtccgg acgaaatctt agaggtcaat atccacgcat cgcgctccgc catcaagatc
     3841 atggccgacg gacccgacaa gtggaggccg cagacgcacg aaaccgccga ccacagcatc
     3901 ccgtattcgg cgggtttggc gctcatgtat ggcaagatcg acccggatta ctacgaggat
     3961 ccctatttgc acgacccacg gctgctcgac ctcgtgagcc gggtcaaatg cctgccatcg
     4021 gacgaagctg accagcccga gttcgccaac ctctgcgagg ggaggttgtc ctgaggtccg
     4081 gcgcccgcaa gacggtgcgc gtcgaatatc atcgcggaca tttcaaaaac ccgatgaccg
     4141 acgccgaaat ggaagagaag ttccgtttga tggcgcaaaa gcacttacct cccgatcgcg
     4201 tcgacggcct gctgcgcatt gtctggaacg tcgagaccga gccgcaggtg agcaacctca
     4261 tcgcagcgac gcgggtgtga ccacgcaatt attaaaattc gtacaaccgg gtcggatttt
     4321 ctacgaggat tttccggcgc accgcagcat ccggcgccca ggtgggcagg agattgaata
     4381 caagcccgtc atcgacctgc cacagcggcg tgatctttga ggtgctgccg tcctctgaat
     4441 tcgggtgtgg ccagttggtg ccccacagaa tgcgatcgac gttggcactg atcagcatct
     4501 gggcgagcgg cgtgaaataa ccgtagttct cgcgcgaacc cgcggtgacc gaaatcttga
     4561 cataggcctt gccggatttc acgaggctga ccaagtcgga gaagccgtgc tgccccaccc
     4621 caagctcctc cttcgcattg ccgaaatgat cgaacaccag cgtcaccggc gatgcggcga
     4681 gcgtgtcttt catcgcggcg atcaccggca gtgtcgtgtt gagttggata tgccagtcgc
     4741 ggctcttcac gcgcgcagcg gcggcgagga agcgctcggt cgcgactttg ggatcattga
     4801 taccggcagt cgacagattg aggcgtatgc ccttgaagcc aagcgacgcg aggcgatcca
     4861 attcggcgtc ggtggtctta tcgtcgatta ccgccacgcc gcgggcgtcc ttgccgcgcg
     4921 ccgccatgcc gtagatcgtc gcggaattat cggggccata cacgcttggc gtcacgatga
     4981 ccacgcgctg gattttgagc gcattgtgca gcgcgcccat ttcttccggc agcgccgtct
     5041 cgggggtata tgtgcgcccc gcaaaccatg gaaacttgac cggatcgcca tggatatgcg
     5101 tgtggcaatc acacgcgccc gctgggacgt cgaaattgac attggtcgcc ggctgcgatg
     5161 ctttggcata gccgaaacgc ggttgcatca gaacgccggc agcagctgcg cctagcatga
     5221 attcgcgacg cgcgatcacg ataacctccc cgttgaaggc ctgtccttgc cggatggtcg
     5281 ctgccccgct gaacgagatt ttgcgtaact ccggtgctgc agttcgaagg tgaggctacc
     5341 tcaaattcat ctccatgcga atggggatga tgttcattca cgaccgaagc cgtcgaagtc
     5401 acacgaccat ccgtgtccgc ttgtccccga aagcgaccat caccgatcaa aatgcgatcc
     5461 gtcgcgatgt gcgacatccg cactcatggg cgcagcaaac ccggcctctc tattcgatca
     5521 atcgatcggc cgccacctgc agcgcgagag gaacactgag ctccagcgcg gcggcggtgt
     5581 tgcgattgat cgtgagctcg aatttcaccg gctgctcgac cggcaggtcg gcgggcttgg
     5641 cgcctttcag gatacgatcg gcgtaggccc cagcgcgttt gaattggtcg acatagtcga
     5701 tgccgtagga aagaagcccg ccgatctcga cgaagtgggc caggggatag accgtgggaa
     5761 tgcgatgccg cgccgcctgc gccacgatgc gctcgcgatg gcgcgcggtg aacacgctcg
     5821 gcatgacgct ggcgccgccg cccggcgact gcgcgagcgc ggcgtaggcg ccgtcgatat
     5881 ccgccggatc gttgagcggc gcgacgatca gctccaggcc cagcgcccgc gctccggcct
     5941 gcattgcggg aagatagatg ccgccggtcg cgccggtatt ggcggttgcc gggttgaaca
     6001 gcatggcgac gcgtttgacc atgggtgcga tgtcgcgcag gagctccagc cacttgctgc
     6061 ccatggtggc ttcgaagttg atgaagccgg tggcgttgcc gccgggacgg gcgaggctct
     6121 gcacgaagcc ggggccgatc ggatcggata cggcgacgaa gatcaccggc acgtcgggcg
     6181 ccgcctgccg gatcagcgtg atcgccggtg tcgtgtaggt gacgatcagc tccggcccga
     6241 gagcgagcaa ttcctgcgcc tgcgcgtgca ggccggcgag atcgccggca gcgcgaacat
     6301 cgatgcggag gttctggccc tcgacccagc ccagcgcgcc gagccctccc ttgagcgcgc
     6361 cgagatatgt ggcagcccac ggatcgccgg ggtcgagacc catgagcacg ccgatgcgcc
     6421 gcatccgctc gctttgctgc gcgcgcgccg ccagcggcca gccgactgcc gcgccgccga
     6481 gcatggcgat gaactcgcgg cgcctcactc gatcacctcg tcggcaagcg ccagtagcct
     6541 gtccggaacg ttgagaccga gcgtcttgcc ggtcttgaga ttgatgacca tttcgaatat
     6601 ggccgcctgc gtgactggca ggtcggacgg cttctcgcct ttgaggatgc ggcctacata
     6661 ggtgccggcc tgttcccaca ggcgcgcgcg gttcggtccg taactcatca gaccgccggc
     6721 ctcgccaaat tcacggctgt catagatggt gggcacgccg tagcgagccg aaagggcgac
     6781 aagctgcgcg cgacggagaa agaaaaacgg gtcggtggca accaacaacg cgtctccggg
     6841 ccgcagcgcg agataggcgt cctcgatctc gcgatcggtg ctggcctcca gcacatcaag
     6901 ctgcactccg agcttgccag ccgcggcctg aaggctttcg ctcacctgct tcgcgctggg
     6961 atgggtcggc ttgaggagca gcgctatgct cagcgcttgc ggcaccagct ggcgcaaaag
     7021 gctcagtcgc tttgccgcca cttccacggc caaggtcgtg attcccgtgg cattgccgcc
     7081 cggtcgattg aggctcgata cgaggcccaa ttcgacc
//
LOCUS       DATCWM010000436         3781 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_154444, whole genome shotgun sequence.
ACCESSION   DATCWM010000436 DATCWM010000000
VERSION     DATCWM010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3781
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154444"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            16..912
                     /locus_tag="VIQ50_08515"
     CDS             16..912
                     /locus_tag="VIQ50_08515"
                     /inference="COORDINATES: protein motif:HMM:NF024785.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HEY9360462.1"
                     /translation="MRALLGPGRKDESGDYTKGADLAPEQVDQIMHMFVPLPTGNSDV
                     SRNVGIIDAARSRFPNCLIYQHGLDELREIADLTRSADNFGQISVDPSVVRGLEYYTG
                     PVFEVDLTFEVKDDRGRPIRFGSVGAGGRYDGLIERFRGEPVPATGFSIGVSRLLAAL
                     QHLGKIESKSEPGPVVVTVFSDIPIAHYQRLVAQLREGEYAPGKKIRAELYLGDGKFG
                     AQMKYADKRGSPCVVIQGGNEKAKGEVQIKDLILGAEIAGMSKDRDDYLKKQAVAQFA
                     VSEDKLVDAVREVLARHDVSWS"
     gene            complement(962..1291)
                     /locus_tag="VIQ50_08520"
     CDS             complement(962..1291)
                     /locus_tag="VIQ50_08520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360463.1"
                     /translation="MLRRALLSVMALLLLGAAAHAQIYIYHANDTGGIIPWSCENEAI
                     AQQVAAAYCARWDKYHRITSVHRQYGDFIAFSCLWSPYVNPYALPAVPTRNTCYYARP
                     LPLIITK"
     gene            1489..1944
                     /locus_tag="VIQ50_08525"
     CDS             1489..1944
                     /locus_tag="VIQ50_08525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360464.1"
                     /translation="MSGRALLLAFAFAAALALPAAPARAANWLELNFYLSGPQYEGKL
                     PPCDYRDALLRIASRFNQKEDQYWATDLRILNFEKVRETAFRPWAAQTIPRRFCSGIV
                     EISDGTRHVINYSIAEDAGMIGASWGVEWCIVGLDRNWAYNPACKMARP"
     gene            2141..2836
                     /locus_tag="VIQ50_08530"
     CDS             2141..2836
                     /locus_tag="VIQ50_08530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016844479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease T2"
                     /protein_id="HEY9360465.1"
                     /translation="MVGNVGRVACAALAVWFTVGVGELAAQDSRQNEPGQFDFYVLAL
                     SWSPSFCEASGERGTPPRQQCGARPYSFVVHGLWPQYEKGFPEFCEQPAPRLNRNIVS
                     SMLDLMPAPRLIFNEWDRHGTCSGLSARAYFETVRKARAVVKIPDAYIAPSTTLTVTP
                     DEVEEAFVNANPGLTRDGIAVTCDSRRLGEVRICLGRDLRFRGCPDIDARACRREQVV
                     MPPVRGGDAAQAR"
     gene            3062..>3781
                     /gene="rlmJ"
                     /locus_tag="VIQ50_08535"
     CDS             3062..>3781
                     /gene="rlmJ"
                     /locus_tag="VIQ50_08535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HEY9360466.1"
                     /translation="MNYRHAFHAGNFADVVKHAVLVRILEHLRRKPAPFRVIDTHAGA
                     GRYDLGAEEAQRGGEWREGIGRLLDARIEPPARALLAPYLDAVAACNGPGPLTSYPGS
                     PVLVRAFLRVQDRLIACELEPNAAAALARNLAGDRRCKAMTIDGWTALNAYVPPKERR
                     GLVLIDPAYEQVGDFARLAQALAAAHRKWASGTDLAWYPIKERTAPDALARRLCHSGM
                     AKILRAELSAGAARAPGRLAAC"
BASE COUNT          645 a         1170 c         1252 g          714 t
ORIGIN      
        1 ctcggagcgg acggcgtgcg cgccctcctt gggcctggtc gaaaagacga aagtggtgat
       61 tacacgaagg gtgcagatct cgccccggag caagtcgatc agataatgca catgttcgtt
      121 ccgctgccga ccggcaactc cgatgtttcg cggaatgtcg gaataattga tgccgcgcgt
      181 agccgatttc caaactgctt gatttaccaa catggattgg atgaacttcg cgagattgcc
      241 gatttgactc ggtctgcaga caactttggg cagatcagcg tcgatccatc cgtggtacgc
      301 ggtcttgagt actacaccgg cccggtgttc gaagtggatt tgacgttcga ggtcaaggat
      361 gaccgcggcc gcccgatccg tttcgggtcg gtcggcgccg gcgggcgtta cgatggactg
      421 attgagcgct ttcgcggcga gccggtgccg gcgacgggtt tttctatcgg cgtgtcgcgg
      481 ctgctggcgg cgctgcagca tcttggcaag atcgaaagca agtccgagcc gggaccggtg
      541 gtggttacgg tgttttccga cattcccatc gcccactacc agcgcctggt ggcgcaactc
      601 cgcgagggcg agtacgcgcc gggaaagaaa attcgcgccg agctttattt gggtgacgga
      661 aagttcggcg cgcagatgaa atacgccgac aaacgcggca gtccctgcgt ggtgatccag
      721 ggcggcaacg aaaaagccaa gggagaagtg caaatcaaag acctcatcct cggtgcggaa
      781 atcgcgggga tgagtaagga ccgcgacgac tacctcaaga agcaagccgt ggcgcagttt
      841 gcggtcagcg aagacaagct cgtcgatgcc gtgcgcgagg tgctcgcgcg ccatgacgtg
      901 agctggagct gacgttacaa agcaagcccg ccaggcgccg agcgcgccgg cagcggtcga
      961 atcacttggt gatgatcagc gggagcgggc gcgcatagta acaggtattg cgggttggca
     1021 ccgccggaag tgcgtacggg ttgacgtacg gtgaccagag gcagctaaac gcgatgaagt
     1081 cgccgtattg ccgatgcacg ctggtgatgc ggtggtattt gtcccagcgt gcgcaatagg
     1141 cggcggccac ctgttgggcg atcgcctcgt tctcgcacga ccacgggatg atgccgccgg
     1201 tgtcgttggc gtgatagatg taaatctgcg cgtgggcggc tgcgcccagc agcagaagcg
     1261 ccataacgga cagcaacgcc ctgcgcagca tgcgcgcctc ccccagcgag tcgccggagc
     1321 ttagatggca tggacggcgc tgcaaaggcg cctcgccgag gaaaccggaa agcgtggccg
     1381 cagggccaca ctcgcggctt tcttgcgtcg cgcgtggagc gcgaccttga tttcgccggg
     1441 gttcgggggt caccgtcgtg ttaagccacc gttgcggaga gctcgatcat gtcaggccgc
     1501 gcgctgttgc tcgccttcgc gtttgctgcg gcgctcgcct tgccggcggc tcccgcccgc
     1561 gccgccaact ggctcgagct caatttctat ctctccggcc cgcaatacga gggcaagctg
     1621 ccgccgtgcg actatcgcga cgcgctactg cgcattgcct cgcgcttcaa ccaaaaggaa
     1681 gaccagtact gggcgaccga tctgcgcatc ctcaatttcg agaaggtgcg cgagaccgcg
     1741 ttccgcccgt gggccgcgca gaccattcca cgccgcttct gcagcggcat cgtcgaaatc
     1801 tccgatggca ctcgacacgt gatcaattat tccatcgccg aggatgccgg catgatcggc
     1861 gcgagctggg gggtcgagtg gtgcatcgtc ggcctcgatc gcaactgggc gtacaatcca
     1921 gcgtgcaaga tggcgcggcc gtaactggcg cagattactg aaaaagcctg tcgacgatta
     1981 gtaggcggtc catttcttgg tcggaccggc cgcggttttg cgtcattgcg gagcggaccc
     2041 gccgcgcgta acgcttagcc tcgcggccat gatcccactc tatttccgtt ttgttcttat
     2101 gatatcgtct gatgttccgc gctgagaggg agtgtgtccc atggttggca atgtcggtcg
     2161 tgtggcgtgt gccgcgctag cggtgtggtt cacggttgga gttggtgagc tcgcagcgca
     2221 ggattcgcgc cagaatgagc ccgggcagtt tgatttctac gtgctcgcgc tctcctggtc
     2281 gccgtcgttc tgcgaggctt cgggcgagcg cggcaccccg ccgcggcagc aatgcggcgc
     2341 acggccctat tcgttcgtgg tgcatgggct atggccgcaa tacgagaagg gattcccgga
     2401 attctgcgaa cagccggcgc cccggctcaa ccgcaatatc gtctcctcga tgctcgacct
     2461 gatgcccgcg ccgcggctga tcttcaacga atgggaccgc cacggcacct gctcggggct
     2521 ttctgcccgc gcttatttcg aaaccgtgcg caaggcgcgc gccgtggtga agattcccga
     2581 cgcttatatc gcgccgagca cgacgctcac cgtcacgccc gatgaggtcg aagaggcttt
     2641 cgtcaacgcc aatccgggcc tcacccgcga cggcattgcg gtgacctgcg acagtcggcg
     2701 tctcggcgag gtgcgcatct gcctggggag ggatcttcgc ttccgcggct gccccgacat
     2761 cgatgcgcgc gcctgccgtc gcgagcaagt cgtcatgccg ccggtgcgtg ggggagacgc
     2821 ggcgcaagcg cgctagagcg cgcccggtcc gggaccgcaa gtcgggctca cccgacttgc
     2881 ggcacttaat ggcgttgacg gagaacggcg ggcagcagtc gctgcacccc tctcagtcat
     2941 cggcggcaag ggtgcgcccc cctaatcggc ggttcgcttt catccttagc ccgcgattgt
     3001 ctttcattga gaggcatggg cgactttaca gccgcgaatt tgcgcgcatg actttgtgcg
     3061 tatgaactat cgtcacgcct tccacgccgg caatttcgcc gacgtggtca agcacgcggt
     3121 gctggtgcgc atcctcgagc atctgcgccg aaagccggcg ccattccgcg tcatcgacac
     3181 ccatgccggc gcgggccgct acgatctcgg cgcggaggag gctcagcgcg ggggtgaatg
     3241 gcgcgaggga atcggccgcc tgttggatgc gcggatcgag ccgccggcgc gcgcgctgct
     3301 tgcgccctat ctcgatgcag tcgcggcctg caacggtccc ggaccgctga cgtcctatcc
     3361 cggttcgcct gtgctcgtgc gcgccttttt gcgcgtgcag gatcggctca tcgcctgcga
     3421 gctcgagccc aacgccgcgg cggcgctcgc gcgcaatctc gcaggagatc ggcgctgtaa
     3481 ggccatgaca atcgacggct ggaccgcgct caacgcctac gtgccgccga aggaacggcg
     3541 cggtttggtt ctcatcgatc ctgcgtatga gcaggtcggc gatttcgcgc gcctcgcgca
     3601 agcgctcgct gccgcgcacc gcaaatgggc gagcggcacc gatctcgcct ggtatccgat
     3661 caaggagcgc accgcgcccg atgcgctggc gcgccgcttg tgccacagtg ggatggcaaa
     3721 aattttgcgc gccgaactca gcgccggcgc ggcgcgcgcg ccgggtaggc tcgccgcctg
     3781 c
//
LOCUS       DATCWM010000437         2518 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_456623, whole genome shotgun sequence.
ACCESSION   DATCWM010000437 DATCWM010000000
VERSION     DATCWM010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2518
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_456623"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..605)
                     /locus_tag="VIQ50_08540"
     CDS             complement(<1..605)
                     /locus_tag="VIQ50_08540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008833932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY9360467.1"
                     /translation="MAEHLTPDICVIGAGSGGLSVAAAAAAFGVPVVLIEKGKMGGEC
                     LNTGCVPSKSLIAAGKRARAITNAAAFGVSTQAADIDFAKIHRHVHGVIAAIAPNDSK
                     ERFNGLGVRVIEGAARFKDRNTVVVNATEIVARRFVVATGSSPALPPIAGLDHVPYLT
                     NETVFDLTARPEHLIVIGAGAIGLELAQAFRRLGSAVTVLEA"
     gene            complement(681..1502)
                     /locus_tag="VIQ50_08545"
     CDS             complement(681..1502)
                     /locus_tag="VIQ50_08545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HEY9360468.1"
                     /translation="MSDDKHPSSAAASAGHSKFPLRRLVPLIIVIAASAAVFAMGWQR
                     QLSFEWLVRHHEALRAFIAAHEVSALVAYVALYIAAAALSIPVGVFLTMTAGILFGAV
                     LGGAASVVGATIGAICIFLIAKSAVGDYLVRRAGPLAQKLAQGFRADAFSYLLFLRLV
                     PIFPFWIVNLVPALVGVKLATFAAATALGVIPATFVFAFVGQGLDSVIAAQQAAYQSC
                     LAAARPDCRLVFHINTALTPELLAALAALGVLALVPVLVRRLRARSPAPARADHA"
     gene            1791..1925
                     /gene="rpmH"
                     /locus_tag="VIQ50_08550"
     CDS             1791..1925
                     /gene="rpmH"
                     /locus_tag="VIQ50_08550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005980833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HEY9360469.1"
                     /translation="MKRTFQPSNLVRKRRHGFRARMATKGGRKVVAARRARGRKRLSA
                     "
     gene            1951..2274
                     /gene="rnpA"
                     /locus_tag="VIQ50_08555"
     CDS             1951..2274
                     /gene="rnpA"
                     /locus_tag="VIQ50_08555"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009337992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HEY9360470.1"
                     /translation="MQRLRHRADFLAAATGVKVPTAAFVLQARKRGDDGPIRVGFTAS
                     RRIGTAVERNRVRRRLKEVVRLSAATGLSRGHDYVLIGRRAALSLPFEQMTQDFERAL
                     RRVCK"
     gene            2271..>2518
                     /locus_tag="VIQ50_08560"
     CDS             2271..>2518
                     /locus_tag="VIQ50_08560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEY9360471.1"
                     /translation="MTDQKNTILAIVLSALVLIAWQIYFGLPQMEKQKQIQQQQAQER
                     SQQQPPSLPQQSGTAQAPSAPGAAPQAPTQPGAATAQP"
BASE COUNT          475 a          836 c          855 g          352 t
ORIGIN      
        1 gcctccagca ccgtgaccgc tgaaccgagg cggcgaaatg cctgcgcgag ctcgaggccg
       61 atcgcccccg cgccgatgac gataaggtgc tccgggcgcg cggtgagatc gaagacggtc
      121 tcgttggtga gatagggcac atggtcgagg ccggcgatcg gtggaagcgc cggcgaagag
      181 ccggtcgcga caacgaagcg ccgcgccacg atctcggtcg cattgaccac cacggtattg
      241 cgatccttga agcgcgcggc gccttcgatc acccgcacgc cgaggccgtt gaagcgctcc
      301 ttcgagtcat tcggcgcgat cgcggcgata acgccatgca cgtggcgatg aattttggcg
      361 aagtcgatgt ccgccgcttg ggtcgacacg ccgaaggcgg cggcgttggt gatggcgcgc
      421 gcacgcttgc cggcggcgat cagcgatttg gagggaacgc agccggtatt gagacactca
      481 ccgcccatct tgcccttttc gatgagcacc accggcacac cgaacgcggc cgcagcagcg
      541 gcgaccgaga ggccgcccga gccggcgccg atcacgcaga tgtcgggggt gagatgttcg
      601 gccatgcgtt ctcctgacga ccccgataat atcgctcact gttcttcacg ccttcagtcg
      661 tcatggccgg gcgcggtgca tcatgcatga tccgcgcgcg cgggcgcagg cgagcgcgcg
      721 cgcagccgcc gcaccagcac cggaacgagc gcgagcaccc cgagcgccgc taacgcggcg
      781 agaagctcgg gcgtgagcgc cgtgttgatg tggaacacga gccggcaatc cgggcgcgcc
      841 gccgcgaggc acgattggta ggccgcctgc tgtgcggcga tcacgctatc gaggccttgc
      901 ccgacgaagg caaatacgaa ggtcgcggga atgacgccga gcgcggtcgc ggcggcaaac
      961 gtcgcaagct tgacgccgac cagcgccgga accaggttga cgatccaaaa cgggaagatc
     1021 ggcaccagcc gcagaaacag gaggtagctg aacgcgtcgg cgcgaaagcc ttgcgccagc
     1081 ttttgcgcca acggacctgc ccggcgcacg aggtagtcgc cgaccgcgct cttggcgatg
     1141 aggaagatgc aaatcgcgcc gatcgtcgcg cccacgaccg acgcggctcc gccgaggacg
     1201 gcgccgaaga gaattccggc ggtcatggtg agaaagacgc cgaccggaat cgacagcgcg
     1261 gccgccgcga tatagagcgc gacataggca acgagcgcgg atacttcatg tgcggcgatg
     1321 aacgcgcgca gcgcctcatg atggcgtacg agccactcga acgagagctg gcgctgccag
     1381 cccattgcga acacggccgc cgacgcggca atcacgatga tcagcggaac gagccgccgc
     1441 agcggaaatt tcgagtgtcc ggcgctcgcg gccgcagatg acggatgctt gtcgtcgctc
     1501 atggtcggtc ccagggcgta atccggccac ggcgacattc ggcggcggca ggcccggcgc
     1561 aagtggggac gatcttagcc gaccgcgagc ggcgaaacgg cgcttttcac cgccttgtga
     1621 ggcgcgctca cgcgcttgtg ccgctgcgac ggccgtcgca ttgacgaata ccggcggcct
     1681 cccgtataag cccgcgagtt tctgcacccg gcgaatcccg ccaaatccgg ggtgactacg
     1741 agggccaggc ccaacgccgc gcgggggagc gattcagcgg agaacgagcc gtgaagcgga
     1801 cctttcaacc gagcaatctg gtgcgcaagc gccgccacgg cttccgcgcc cggatggcga
     1861 ccaaaggcgg acgcaaggtg gttgccgcgc gccgcgcgcg tggacgcaaa cggctcagcg
     1921 cctaaacgcc cgccgcgggg cgctcgtgcc atgcagcggc tcaggcatcg cgccgacttc
     1981 ctggccgccg cgaccggagt gaaggtaccg acggcggctt ttgtgttgca ggcgcgcaaa
     2041 cgcggcgacg atggtccgat ccgcgtcggc ttcacagcgt cgagaaggat cggaaccgcc
     2101 gtcgagcgca atcgggtacg gcgccggctc aaggaagtcg tgagactgtc ggccgcaact
     2161 ggtctttccc gcggccatga ttatgtgctg atcggacggc gcgccgccct ctcgctgccg
     2221 ttcgagcaaa tgacacaaga tttcgagcgc gcgctgcggc gagtttgcaa atgaccgacc
     2281 agaagaacac cattctcgcc atcgtactct ctgcgctcgt cctgattgcg tggcagatct
     2341 atttcggcct gccgcagatg gagaagcaga agcagatcca gcagcagcag gcgcaggagc
     2401 gttcgcagca gcagccgcct tcccttcccc agcaatccgg cacggcgcaa gccccctcgg
     2461 caccgggcgc cgcaccgcaa gcgccgacgc agcccggcgc cgccaccgcg caaccgat
//
LOCUS       DATCWM010000438         2423 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_170597, whole genome shotgun sequence.
ACCESSION   DATCWM010000438 DATCWM010000000
VERSION     DATCWM010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2423
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170597"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(80..325)
                     /locus_tag="VIQ50_08565"
     CDS             complement(80..325)
                     /locus_tag="VIQ50_08565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360472.1"
                     /translation="MSELSRDDIAEVLGRVGDAIAAEIVATGIGKDELRAARDRVVRD
                     RKSRTPGPPLKPGAFAQVVDILERSHGMWGEAGSNLE"
     gene            complement(342..>2423)
                     /locus_tag="VIQ50_08570"
     CDS             complement(342..>2423)
                     /locus_tag="VIQ50_08570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008974674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY9360473.1"
                     /translation="AAMLVPMTTVPVTIIGAFAAMAALGFTVNLSTLFAIVLAIGIVV
                     DDAIVVVEGAAHHMERGLPGKEAAIQAMNELFGPIIGITLVLMSVFLPAAFIPGLTGQ
                     MFAQFALVIAATALLSAVNAATLKPTQCALWLRPPVPPNERNLFFRAFNAVYDPFERL
                     YARLVGGMVARSGLMCVIALIIIGVAGYGLTRVATGFLPIEDQGYVLVIVQLPDGASL
                     TRTKRVLDQVSEIAGKNPAVENVIAISGVSVLDNSSTLANAGVAYVVLKDWSERGKGE
                     DLRSLFEQFNRAFAVITEARIVVFPPPPIQGIGNAGGFAMQIELRDGSFDLAKLQTAT
                     NTVVQDAQTQTGLQRVTTSFRSTVPQIKVEVDRAKAETLQVSVDEVFATLGAYLGSSY
                     VDQFNKFGRVFQVYVQADSKFRLRPQDIEQLPVRNKQGAIIPIGTMLHITQTVGPSLL
                     SLYNFYPSSTVMGLPATGFSSGQAMLLMEQIADKAMPPGMGFEWTAMSYQEKLVGNQM
                     YYIFALSMLLVYLVLAGPYESWFMPVSVLLAVPLSLVGPVAVLKGLSGSGLDNNLYTQ
                     IGLVLLIALSAKNAILIVEVARERRIFDGKPIVEAALEAARTRFRPILMTSFAFILGV
                     LPLVFATGAGASSRKSIGIAVASGMLASTCLAVLLVPSFFVVVRRFEEWRAARKQPAE
                     KPAAAESKATG"
BASE COUNT          471 a          803 c          757 g          392 t
ORIGIN      
        1 cgcgacggcg gcgagggcct aatccctaat cccttccgat ggttgcggac tgctgcgccg
       61 cggcgcccgc agttcgcgtc tattcgaggt tggagcccgc ctcgccccac attccgtgcg
      121 atcgctcgag aatgtcgacg acctgcgcga aggctcccgg cttgagcggg ggaccgggcg
      181 tgcgggactt gcggtcgcgc acgacccgat cccgcgccgc ccgcaactcg tccttgccga
      241 tgccggtcgc gacgatttcc gccgcgatcg catcgcccac ccgccccaaa acttccgcaa
      301 tatcgtctcg cgacagctca ctcatggcaa agctctccct atcaaccggt cgcctttgac
      361 tcggcagcag ccggcttttc cgccggctgc ttgcgcgctg cgcgccattc ctcgaaccgg
      421 cgaaccacga cgaagaacga cggcaccaac agcacggcca ggcaggtcga ggcgagcatg
      481 ccgctggcca ccgcaatgcc gatcgacttg cgcgaactgg cgccggctcc ggttgcgaat
      541 acgagcggca gcacgcccag gataaaggcg aacgaagtca tcaggatcgg acgaaagcgg
      601 gtgcgcgccg cctccagcgc cgcctccacg atgggcttgc cgtcgaaaat acgccgctcg
      661 cgcgcaactt cgacgatcag gatcgcgttc ttggccgaca gcgcaatgag caggacgaga
      721 ccgatctggg tgtagagatt gttgtcgagg cccgaccccg aaagcccctt gagcaccgcg
      781 accggtccga cgagcgacag cggcaccgca agcagcaccg agaccggcat gaaccagctc
      841 tcgtacgggc cagccagcac caggtaaacc aacagcatcg agagcgcgaa gatgtaatac
      901 atctggttcc cgaccagctt ctcctggtac gacatcgcgg tccactcgaa gcccattccg
      961 ggcggcatgg ctttgtccgc aatctgctcc atgaggagca tcgcttggcc ggagctgaag
     1021 cccgtggccg gcagccccat caccgtcgat gacggataga aattgtagag gctcagcagc
     1081 gacggcccga ccgtctgagt gatgtgaagc atagtgccga tcggaatgat ggcgccctgc
     1141 ttgttgcgca ccggaagctg ctcgatgtcc tgcggccgca gccggaactt cgaatccgcc
     1201 tgcacataga cctgaaacac gcggccgaac ttgttgaact gatcgacgta actcgagccg
     1261 aggtaagctc ccaacgtggc gaatacctcg tcgacggaca cttgcagcgt ctcggctttc
     1321 gcacggtcaa cctccacctt gatctgcggc accgtggagc ggaacgaggt cgtcacccgc
     1381 tgcaatccgg tttgcgtttg cgcatcctgg accacggtat tggtggccgt ctgcaacttg
     1441 gcgagatcga agcttccgtc gcgcagctcg atctgcatgg cgaagccgcc ggcattgccg
     1501 atgccctgga tcggcggtgg cgggaatacc acgatgcgcg cttcggtgat cacggcgaaa
     1561 gcgcgattga attgctcgaa tagcgaccgc aggtcctcgc ccttgccgcg ctcgctccaa
     1621 tccttgagca cgacgtaagc cacgccggca ttggccagcg tcgaactatt gtcgaggacg
     1681 gagacgccgg aaatcgcgat gacgttctcc accgcgggat ttttgccggc gatctcgctc
     1741 acctgatcaa gcacgcgctt ggtccgtgtc agggaagcgc cgtccggcaa ctgcacgatg
     1801 accagcacgt agccctgatc ctcgatcgga agaaaaccgg tggcgacgcg cgtgaggccg
     1861 tagccggcga cgccgatgat gatcagcgcg atcacgcaca tcaggccgct gcgcgcgacc
     1921 atgccgccga ccagtcgcgc ataaagccgc tcaaacgggt cgtacacggc gttgaaggcg
     1981 cggaagaata ggttgcgctc gttcggcggg actggcggcc gcagccacag cgcgcattgc
     2041 gtcggcttga gcgtcgcggc gttgacggcg ctgagcaacg cggtcgcggc gatcaccagc
     2101 gcgaactgcg cgaacatctg gccggtgaga cccgggatga aggcggcggg caggaacacc
     2161 gacatcagca cgagcgtgat gccgatgatc ggcccgaaca gctcgttcat ggcctggatc
     2221 gccgcttctt tgcccggcaa gccgcgctcc atgtgatgtg ccgcgccctc gaccacgacg
     2281 atggcgtcgt cgaccacgat gccgatcgca agcacgatcg cgaacagggt cgaaaggttc
     2341 accgtgaagc caagcgccgc catggcggcg aacgcaccga tgatggtgac cggcaccgtg
     2401 gtcatgggga ccagcatcgc ggc
//
LOCUS       DATCWM010000439         2456 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_424252, whole genome shotgun sequence.
ACCESSION   DATCWM010000439 DATCWM010000000
VERSION     DATCWM010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2456)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2456)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2456
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_424252"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(557..967)
                     /locus_tag="VIQ50_08575"
     CDS             complement(557..967)
                     /locus_tag="VIQ50_08575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="globin domain-containing protein"
                     /protein_id="HEY9360474.1"
                     /translation="MTSEQIDLVRKSFDALWPFRRKLAEHFYDRFFELAPDTRRLFPE
                     DMEKQQLKLMDSIAAIVGTLEQREICQSIISHTGRKHADFGVQTAHFAAFGDALIWGL
                     REQFGPAFTPEVQQAWIVLYDAIQAEMMRAAKTA"
     gene            complement(993..1394)
                     /locus_tag="VIQ50_08580"
     CDS             complement(993..1394)
                     /locus_tag="VIQ50_08580"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
                     /protein_id="HEY9360475.1"
                     /translation="MSPINVRDAGEIERAVAAFARSANGGLIVTGSASATLHRDLIVE
                     LAARGKVPAVYYARYFVVAGGLISYGPDFADQFRRAAGYVDRILKGERPADLPVQAPT
                     KYELVANLRTAKALGLEIPPSVLARADEVIE"
     gene            complement(1397..1975)
                     /locus_tag="VIQ50_08585"
     CDS             complement(1397..1975)
                     /locus_tag="VIQ50_08585"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9360476.1"
                     /translation="MKRREFITLIGGAAAAWPRAARAQQTIRRVGMLLPAAADDAEFQ
                     TRVGAFLEGLRQSGWTIGQNVQIDSRWATTNAVEIRRHAAELAALAPDAILTSSSPAL
                     AALQQATRTAPIVFVNVIDPVGSGFVDSLARPGGNTTGFLLFEYSLSGKWLELLKQIA
                     PNVTRAAVFRDSGNPSGNAQFGAIQALAPRSG"
     gene            complement(1972..>2456)
                     /locus_tag="VIQ50_08590"
     CDS             complement(1972..>2456)
                     /locus_tag="VIQ50_08590"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9360477.1"
                     /translation="VLFNPNFPRAEGRMREVQEAARKTVQDLYITPASNVEEIDQAFA
                     KFDRRRADALLVVGDPFFNARRDQIVALAARFALPAIYDRRDFVAAGGLMSYGTNFSE
                     LYRRQGAYTGLVLKGSEPADLPVLQLTKSELVINLKTADALGVKISESVLARADEVIE
                     "
BASE COUNT          440 a          775 c          769 g          472 t
ORIGIN      
        1 gcaccaccga gctcgaccac ggcgacgctc tgcggatggc gctcggcgta ggcgcgcgtg
       61 gcggcgagat cgagggcctg ggcgggccgc ttggttttga gcgcttcgct cactgggccg
      121 cccgggatcg gacggaacgg accccttcgc acgtcagcga aggccggcgg caggttgtgg
      181 gcagcgcccg ttcgaagacc ctcgccctcg catagataca acaacccgaa cttcgccccg
      241 cacagcctta tcgcatggtc caacaaggct ctaaatatag gctccagctc tccgcgcgcg
      301 ccggagatca cgcgcagcac ctcggatgcc gcggtctgct gctccagcgc ttcggcgagt
      361 tgttttttta ggtcggcatt ggcggcgcga aggcggtcaa cgcctgcgct tgccttcgtt
      421 cgcgtcgaac gaggtttgcg agctggcgtt cggctcttcg cccctttgcg agccaaggtc
      481 acctcgtcga catgctaacg gcgcagccta gcagtctgac atgggtcaga agcaacttta
      541 gaagcggctt ggtgcgttac gctgtttttg cggcacgcat catttccgcc tggatcgcgt
      601 cgtaaagcac aatccatgcc tgctgcacct ctggagtaaa cgccggaccg aactgctcgc
      661 gcaggcccca tatcagggcg tcaccaaatg cggcaaaatg cgctgtctgc actccgaagt
      721 ccgcgtgctt gcggcctgtg tggctgatga ttgactgaca tatttcacgt tgctcgagcg
      781 ttccgacgat cgcggcgatc gaatccatca gcttgagctg ctgcttttcc atatcctcag
      841 ggaacagccg tcgtgtatcg ggcgcgagct cgaagaagcg gtcgtagaaa tgctcggcga
      901 gcttccgacg gaatggccat agtgcgtcga atgatttcct aaccaaatcg atctgctcgg
      961 acgtcatcgg atagcactcc ctttacccct gactattcga tcacctcgtc ggcgcgggcg
     1021 agaaccgagg gcggaatttc tagccccagc gctttggcgg tcctgaggtt ggccacgagt
     1081 tcgtacttgg tcggcgcctg cacgggaagg tcggcgggcc tctcgccctt gaggatgcgg
     1141 tcgacgtagc cggctgcgcg ccggaactga tcggcgaaat cgggcccata ggagatcagg
     1201 ccgccggcga caacgaagta gcgtgcgtag tagaccgcgg gcaccttgcc gcgggctgcc
     1261 agctcgacga ttagatcgcg gtgaagcgtg gctgacgcgc tccccgtgac tatcagaccg
     1321 ccgttcgcgg agcgcgcgaa cgccgccacg gcgcgctcga tctcgccggc gtcgcgcacg
     1381 ttgattgggc tcacctctat cccgagcgag gcgccaacgc ctgaatagcg ccgaactggg
     1441 cgtttccgga agggttgccg ctatctcgaa agactgccgc tcgggtcacg tttggcgcga
     1501 tctgcttgag cagctccagc catttcccgc tcagactgta ttcgaacagc aagaagccgg
     1561 tggtgttgcc gcccggtcgg gcgaggctat ccacgaagcc gctgccgacc ggatcaatga
     1621 cattcacaaa cacgatcggc gcggtacgag tcgcctgttg caacgcggcc agggccgggc
     1681 tgctggaagt taggatagca tccggcgcga gtgcggccag ttccgccgcg tgtctgcgaa
     1741 tttcaacggc attggtcgtg gcccagcggc tgtcaatctg cacgttttgg ccgatggtcc
     1801 agcccgattg ccgcaggccc tccagaaatg ccccgacgcg agtttgaaat tccgcatcgt
     1861 ctgctgctgc aggcaggagc atgccgacgc gccgtatagt ctgctgtgcg cgcgcggcac
     1921 gcggccacgc cgctgccgcg ccgccgatga gcgtgatgaa ctcgcggcgc ttcactcgat
     1981 cacctcgtcg gcgcgcgcga gcacactttc ggagattttg acgccgagcg catctgcggt
     2041 cttgagattg atcaccagct cggacttggt gagctgcagc accggcagat cggcaggctc
     2101 cgaacccttg agcacaagtc cggtatacgc gccttgccgg cgatacaact cggaaaagtt
     2161 tgttccgtag ctcatcaaac cgcccgccgc gacgaaatcg cgccgatcgt agatcgcggg
     2221 aagggcaaag cgcgcggcaa gcgcgacaat ctggtcgcgt cgagcattga agaacggatc
     2281 gccgaccacc aggagcgcat ccgctcgtcg ccggtcgaac ttggcaaagg cctggtcgat
     2341 ctcttcgacg ttactcgcgg gcgttatgta gagatcttgc accgttttgc gcgcggcctc
     2401 ttgcacctcg cgcatgcgcc cttccgcacg gggaaaattc ggattgaaca gcacgg
//
LOCUS       DATCWM010000440         3613 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_224477, whole genome shotgun sequence.
ACCESSION   DATCWM010000440 DATCWM010000000
VERSION     DATCWM010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3613
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_224477"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            340..885
                     /locus_tag="VIQ50_08595"
     CDS             340..885
                     /locus_tag="VIQ50_08595"
                     /inference="COORDINATES: protein motif:HMM:NF016200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HEY9360478.1"
                     /translation="MPDQLHVPAPPALALRLARIAAFAARALLGTLLIGMVLLNVANA
                     ACRYLFSVVFIGADELLVFGMIWMVMIGMILVTIDRRHIALDFLVNRLAPRPRIALTM
                     FHHLIIAIGAAYAAVESLEYARRVAMIGQTSMAIGFPMVFAHSALVVGFAGTALVAAV
                     LVVSGGTELVSSRHATKAELP"
     gene            882..2153
                     /locus_tag="VIQ50_08600"
     CDS             882..2153
                     /locus_tag="VIQ50_08600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019172893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HEY9360479.1"
                     /translation="MIWTLAVLPLALLLLGTPIFAIFLIGAVATFVLFLSVPPVALHQ
                     IMFGGMENYALLAVPFFIFAGELMSGSGIARRLIVWVLALIGRIPGSLGVATVGACTL
                     IGAISGASTATVAVVGKTLYPGLIRDGYSVRFASGLLSSSGSIDIVIPPSIAMILFGM
                     AAEQSVAKLFAAGVLPGLLIAFMMSAYVVIMALRMRIPTRGKFDFARLRAATWDAGPA
                     LLMPVFVLAGIYLGWFSPTEAGGFACLYAILVGRYVYREMSWSDVLEAATQAAIITSQ
                     ILIIVATAALFSWILTINGVPQAMTGGLTSLNLPPWGFLMAVNVILLIVGCFLDPTSA
                     IIVLTPLFMPLVRALGIDPIHFGIVMTVNIAIGMFTPPFGLNIFVAQSVLGVPLDTIY
                     RGVLPFAVVQIAALLIITYWPGLSLYLTAAL"
     gene            2171..3184
                     /locus_tag="VIQ50_08605"
     CDS             2171..3184
                     /locus_tag="VIQ50_08605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018063437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEY9360480.1"
                     /translation="MPVNRLLRAAFAALAVTALASAQPVAAQTVMKLANATINDVQHE
                     WQKLFAADLQKRIGDKVKTEIYPASQLGAIPRMVDGVLLGTIESFITPTAFLTPTDPR
                     FQIFDVPGLFVSPEHVHAVIHDPAYRDHMETMFLNRGLRIIGAIYNSPTVVLTKQPAP
                     TLEALKGMKVRTFASPLQIEPMKAIGAIPVPLALTEVIPQLQSGGLDGMLAGMPILTA
                     FKYYDVAKFVTDLNFAQIISVDVINEAWFQKQPKDVQEAIRAAGRAAEQQAFPWGVDN
                     VQKTNELWLANKGEILKLPQQEQASMMQTFVSLGTNIVVQNPVVKAEMEKLQALVDAK
                     RPK"
     gene            3326..>3613
                     /locus_tag="VIQ50_08610"
     CDS             3326..>3613
                     /locus_tag="VIQ50_08610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360481.1"
                     /translation="MTIIDSQVHAYEANTPKRPWHAVPNWPDHVTGDEMVAAMDKVGV
                     DGAIFISAFSMYRYDASYAVEVQRAHPDRFAIVKPVDPDDPAVGDVIAEWKR"
BASE COUNT          617 a         1159 c         1083 g          754 t
ORIGIN      
        1 ccctgccagg cccgcagcaa tgcgcaattt gtcctgcgcg acggcggcgc aattcaagct
       61 ggcaagaagc gcgaagacgg gcgttgcgaa cctgagacta cgcttgatca tgtcccgtcc
      121 tcaccttcat gcgatccaat cggtcaactc aatcggcgcg agtccatcgc ctcattggcg
      181 gcggtgtgcc gcgccgattt ttcctgcagt aagccatcct cgcaacccat acgcggtctg
      241 gcaacgctgg aattcgcgcg caagacaaga tcgggcttga acagagccat ctcgaggctc
      301 caaacttaaa ccacatcgag tctcggcccg cacagcccca tgcccgacca attgcacgtt
      361 cccgcgccac ctgcgctcgc gcttcgcctc gcgcggattg cagcctttgc ggcacgcgcg
      421 ctgctcggca cgcttctcat cggcatggtc ctgctcaacg ttgcgaatgc ggcgtgccgc
      481 tatctgttca gcgtggtgtt catcggggcc gatgagctgc tggtcttcgg catgatctgg
      541 atggtgatga tcggcatgat tctggtcacg atcgaccgcc gtcacattgc gctcgatttt
      601 ctcgtgaatc ggctggcgcc gcgcccgcgc atcgcgctca ccatgtttca tcacctcatt
      661 atcgcgatcg gcgcagccta tgcggccgtt gagagcctgg agtacgcgcg gcgcgtggcg
      721 atgatcggac agaccagcat ggcgatcggc tttcccatgg tgttcgcgca ttcggcgctg
      781 gtggtgggat ttgcggggac ggcgctggtg gcggccgtgc tggtcgtgag cggcggcaca
      841 gagctcgtca gctcgcgcca cgccacgaag gctgagctac catgatttgg acgctggcag
      901 ttctgccgct cgcgctgctg ctgctcggca cgcccatttt cgcaatcttt ctgatcgggg
      961 cggtagcgac attcgtgttg tttctgtcgg tgccgccggt tgcgctccac cagatcatgt
     1021 tcggcggcat ggagaactac gcgttgctcg ccgttccgtt cttcattttt gccggcgaat
     1081 tgatgagcgg gtccggcatc gcgcgacgcc tgattgtctg ggttctggcg ttgatcggtc
     1141 gcataccggg cagcctcgga gttgcgaccg tcggcgcttg cacgctgatc ggtgcgattt
     1201 cgggcgcgag taccgccacc gtggctgtgg tcgggaaaac gctctatcca ggcctgatcc
     1261 gcgacggcta cagcgtgcgg tttgcctcgg gcctgctcag ctcgtcgggc tcgatcgaca
     1321 tcgtgatccc gccgagcatt gccatgatcc tgttcggtat ggcggcggag caatcggtcg
     1381 caaagttgtt cgcggccggc gtgctgccgg gattgctgat cgccttcatg atgtcggcct
     1441 acgtcgtgat catggcgctg cggatgcgga ttccgacccg aggaaaattc gattttgcgc
     1501 ggctgcgggc agcgacgtgg gacgcggggc ccgccctgtt gatgccggtc ttcgtgctcg
     1561 ccgggattta tctcggctgg ttttctccga ccgaggcggg aggttttgcc tgcctctacg
     1621 cgatcctggt ggggcgctat gtttaccgcg agatgagctg gagcgacgtg ctcgaggccg
     1681 ccacgcaggc ggccatcatc acctcccaaa tcctcatcat cgtcgcgacc gccgcgctgt
     1741 tttcctggat cctcaccatc aacggggtgc cgcaagccat gaccggcggg ctaacgagcc
     1801 tgaacctgcc gccttggggc ttcctcatgg cggtgaatgt catcctcctg atcgtgggat
     1861 gctttctcga tccgacctcg gcgatcatcg tgctcacgcc gctcttcatg ccgctggtca
     1921 gggcccttgg catagatccg atccacttcg ggatcgtcat gacggtgaat atcgcgatcg
     1981 gtatgttcac gccgccgttc ggcttgaaca tctttgtcgc acaatccgtg ctgggcgtgc
     2041 cgctcgacac catctatcgc ggtgtgcttc catttgccgt cgtgcagatc gccgcgctct
     2101 tgatcattac ctactggccc ggactttcgc tgtatctcac cgccgcgctc tgaagccgca
     2161 ggagacgccc atgcctgtca accgattgct gcgagccgcg ttcgcggctc ttgccgtcac
     2221 cgctctagca tcagcgcagc cggttgcggc ccagaccgtc atgaagctcg ccaatgccac
     2281 tatcaacgac gtgcagcacg agtggcaaaa gctgttcgcc gccgacctgc agaaacgcat
     2341 cggtgacaag gtcaagaccg agatctatcc ggcgagccag ctcggcgcca ttccgcgcat
     2401 ggtggacggc gtgctgctcg ggacgatcga gtccttcatc accccgaccg ccttcctgac
     2461 gccgaccgat ccgcgcttcc agattttcga cgtgcccggc ctgttcgtct cgcccgagca
     2521 cgttcacgcg gtcatccatg accccgccta tcgcgatcac atggagacaa tgtttctcaa
     2581 ccgcggcctt cgcatcatcg gcgccatcta caacagcccc actgtggtgc tcaccaagca
     2641 gcccgcgccg acgcttgagg cgttgaaggg catgaaggtg cgcacatttg cgtcgccctt
     2701 gcagatcgag ccaatgaagg cgatcggtgc gattccggtt ccgcttgctc tcaccgaggt
     2761 cattccgcag cttcagtccg gcgggctcga cggcatgctt gccggcatgc cgatcctcac
     2821 cgcgttcaag tattacgacg tggcgaaatt cgtgaccgac ctgaacttcg cgcagatcat
     2881 cagcgtcgat gtcatcaacg aagcatggtt ccagaaacag cccaaggacg tgcaggaggc
     2941 gattcgcgcc gccggccgag ccgcggaaca gcaggcattc ccgtggggcg tcgacaacgt
     3001 gcagaagaca aacgagctat ggcttgccaa caagggcgaa attctcaagc tgccccaaca
     3061 ggagcaggcc tcgatgatgc agaccttcgt ttctctcggc accaatatcg ttgtgcaaaa
     3121 tcccgtggtg aaggccgaga tggagaagct tcaggcactt gtcgacgcca aacggccgaa
     3181 gtgacttcat cctagctcgc tgccgtcggg gccggcttgc ttattctgcc ggcatcggca
     3241 acgcatgaag ccagggcacc ccgcggcccc tggacacgaa cccgccgtgc taagcaaact
     3301 tgcgtcgcac acaggagctt tcccgatgac gatcatcgat tcccaggtcc acgcttatga
     3361 ggcgaacact cccaagcgac cctggcacgc cgtgccgaac tggcccgatc acgtcacggg
     3421 ggacgagatg gtggcggcga tggacaaggt cggcgtcgac ggcgcgatct ttatctccgc
     3481 cttctccatg taccgctacg acgcgagcta tgcggtggaa gtgcaaaggg cgcatcccga
     3541 tcggttcgcg atcgtcaaac cggtcgaccc cgatgatcca gccgttggcg atgtcatcgc
     3601 cgagtggaag cgg
//
LOCUS       DATCWM010000441         2114 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_332555, whole genome shotgun sequence.
ACCESSION   DATCWM010000441 DATCWM010000000
VERSION     DATCWM010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2114
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_332555"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            317..1006
                     /gene="aat"
                     /locus_tag="VIQ50_08615"
     CDS             317..1006
                     /gene="aat"
                     /locus_tag="VIQ50_08615"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008914 - leucyl-tRNA--protein transferase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HEY9360482.1"
                     /translation="MANRETAFIEITPEVLLKAYACGIFPMAESADDPALYWIEPEQR
                     GIIPLDRFHIPSRLARTVRSDQFTVTVDRDFDAVLEGCAEARAGRPRTWINGRIRMLY
                     RKLHERRHCHSLEVYEGENLVGGLYGVTLGRAFFGESMFHRARDASKVALVHLVARLK
                     AGGFRLLDTQFVTDHLRTFGAIEVPRRQYHKLLEAALGGEGDFAALGTKHPLTGAQVL
                     AQLAAERSARG"
     gene            complement(1093..1338)
                     /locus_tag="VIQ50_08620"
     CDS             complement(1093..1338)
                     /locus_tag="VIQ50_08620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360483.1"
                     /translation="MSTSSNARLIGTPAATARSQNPFTSVASASPRRPALASQAFNAS
                     MSCSATMVIPGIRPSAAFPRNKRTLEVIMSPTIFACM"
     gene            1653..>2114
                     /locus_tag="VIQ50_08625"
     CDS             1653..>2114
                     /locus_tag="VIQ50_08625"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEY9360484.1"
                     /translation="MECVYSSWASAHADGFADAHIAALKRVVPTLALAIKAAALARMT
                     ATLMETYLGRDAARRVLSGRIMRGVADRIDAVIWFSDLRNFTRITDTAPEQIISLLND
                     YADVIVSAIHAKGGDVLKLIGDGILAIFTAADRAPACAAALSAAMAARSKVA"
BASE COUNT          351 a          702 c          678 g          383 t
ORIGIN      
        1 ttcgcgtctt tgtcagacct cttcacggta tttccgctgc aggcaatgag ccggcaccct
       61 cggcaaactt tccaagcgag ttgagcctct ccctacggtg acgcatcggc gtcgagggat
      121 ttgagctcgc ggatttggtg aggcggcgtc tcctggtcgt ttcctgcgtt tctaacttaa
      181 tacagttggg aaaccaagct gcgcggcact ggacatgggg ccagcgcctg cggttgcagc
      241 tcgcgggcac ctctcgcatg gcgccttggc atgccttatc ttttgggcat ggtccgtccc
      301 gcctgacgaa acgcgcatgg ccaaccgcga aaccgcattc atcgaaatca cgccggaggt
      361 tctgctcaag gcctatgcct gcggcatctt tcccatggcg gagagcgctg acgacccggc
      421 gctctattgg atcgagccgg agcagcgcgg catcattccg ctcgaccgct tccacatacc
      481 gagccggctt gcccgcacgg tgcgctccga ccagttcacc gtcacggtcg accgcgattt
      541 cgacgcggtg ctcgagggat gcgcggaggc ccgcgccggc cgcccgcgca catggatcaa
      601 cgggcgcatc cgcatgcttt atcgcaagct ccacgaacgg cgccattgcc acagcctcga
      661 ggtctatgag ggcgagaacc tcgtcggcgg gctctacggc gttacgctcg gccgcgcgtt
      721 cttcggcgag agcatgttcc accgcgcgcg cgacgcctcc aaggtcgcgc tggtgcacct
      781 cgtggcgcgc ctcaaggccg gcggatttag gctcctcgac acgcagttcg tgaccgatca
      841 cctgcgcacc ttcggcgcga tcgaggtgcc gcggcgccaa tatcacaaat tgctcgaagc
      901 cgcgctcgga ggcgaaggcg acttcgccgc gctcggcacg aagcatccgc tcacgggcgc
      961 gcaggtgctc gcccaattgg cggcggagcg atccgcgcgc ggttgagccg cgggctatcc
     1021 agcctcaacg taggtatgct gtcgcgcaaa cacgaaatgc cgcccgtcgt cggctgttgg
     1081 cacaacacgg cgtcacatgc acgcaaagat cgttggcgac atgataactt cgagcgtccg
     1141 cttattgcgg ggaaaagcgg ccgagggtct gatgcctgga atcaccatgg ttgccgagca
     1201 tgacatcgag gcattgaacg cctggctcgc caaggcgggc ctgcgcggcg aggcggaagc
     1261 gacgctggtg aacgggttct gcgagcgcgc agtggccgcc ggcgtgccga tcagccgcgc
     1321 gttgctgctg gtcgacacgc tgcatccgat ctacgaaggc cgcctggttc gctggggata
     1381 tgacccctcg cagcgggccg tagtggatta tggccgcacc catctgccgg aaggcatcgc
     1441 tgatcggcgt ctactcgccg agcagagcga acacgccgcg cgctggcgcg caagtccgtt
     1501 ctttcgcctg ttggagaccg gagagagctg gctgcgccgc cgtgtgacaa ccgagaacga
     1561 agccgagttt cccgtgctgc aggactatcg ggcggcggga atgaccgatt acctcgctgt
     1621 catcagccgc tttgcgcccg aaggggtcat cgatggagtg cgtctattcc tcgtgggcga
     1681 gcgcgcacgc cgacggcttt gccgatgcac atattgccgc gctcaagcgc gtggtgccga
     1741 cgcttgcgtt ggcaatcaag gcggccgcgc tcgcgcgtat gaccgccacg ttgatggaga
     1801 cctatctcgg ccgcgatgcc gcacggcgcg tgctcagcgg ccggatcatg cgcggcgtcg
     1861 ccgaccgcat cgacgccgtc atctggttca gcgacctgcg caacttcacc cgcatcaccg
     1921 ataccgcgcc cgagcagatc atttcgttgc tcaacgatta tgccgacgtc atcgtctctg
     1981 cgatccacgc gaagggcggc gacgtgctca agctgattgg cgacggcatt ctcgccattt
     2041 tcaccgccgc cgaccgggcg cccgcctgcg cggccgcgct cagcgccgcg atggccgcgc
     2101 gcagcaaagt ggcg
//
LOCUS       DATCWM010000442         6095 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_305625, whole genome shotgun sequence.
ACCESSION   DATCWM010000442 DATCWM010000000
VERSION     DATCWM010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6095)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6095)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6095
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_305625"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(151..1611)
                     /locus_tag="VIQ50_08630"
     CDS             complement(151..1611)
                     /locus_tag="VIQ50_08630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020809838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobyric acid synthase"
                     /protein_id="HEY9360485.1"
                     /translation="MPARALMFQGTGSDVGKSLIVAGLARALANRGLKVRPFKPQNMS
                     NNAAVTADGGEIGRAQALQARAARTPPSVHMNPVLLKPQSEIGAQVVVQGCVHGVAKA
                     AAYQRMKPDLARFVLDSYARLKQDADIVLVEGAGSASEVNLRANDLANMGFARAADIP
                     VVLIGDIDRGGVIASLVGTKSVIDATDAAQIRGFLVNKFRGDPTLFADGMTTIARATG
                     WESLGLVPFFADARLLPAEDALGLDGPSTAKPNARIKIAVPILPHVANFDDLDPLEAE
                     PAVDLVRVRPGDALPGNADLVILLGAKATISDLDALQNAGFHIDIAAHVRRGGRVLGL
                     CGGYQMLGRTIRDPLGLEGSIGASDGLGLLDVETTLTGDKRLERVQGVTSDGIPVCGY
                     EMHMGLTEGPDRSRPFARLSDGSPEGAVSPDGRVVGTYIHGLFTDDRQRSAWLRRFAA
                     DGAAISYDGLIDETLDRLAAHLEAHIDIDRLLSLAR"
     gene            complement(1614..2231)
                     /gene="cobO"
                     /locus_tag="VIQ50_08635"
     CDS             complement(1614..2231)
                     /gene="cobO"
                     /locus_tag="VIQ50_08635"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HEY9360486.1"
                     /translation="MSRPIDENEAERHRAKMAKRKAVQDAEVVAKTMEKGLLIVHTGT
                     GKGKSTAAFGLALRMLGRGHRVGVVQFIKGAWHSAERDALAVFADQVSWHTMGEGFTW
                     ETQDLKRDIAAAEQAWAKAIELMADPTIGLVILDELNIALRYDYLDVHSVVTTLKARR
                     PSLHVAVTGRNAKPELIAAADLVTEMTLVKHHFAAGVKAQPGIEF"
     gene            complement(2228..2764)
                     /gene="cobU"
                     /locus_tag="VIQ50_08640"
     CDS             complement(2228..2764)
                     /gene="cobU"
                     /locus_tag="VIQ50_08640"
                     /EC_number="2.7.1.156"
                     /EC_number="2.7.7.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0043752 - adenosylcobinamide kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional adenosylcobinamide
                     kinase/adenosylcobinamide-phosphate guanylyltransferase"
                     /protein_id="HEY9360487.1"
                     /translation="MATPAASCSARLTLVLGGARSGKSWYAERLITASPPPWIYVATA
                     EPGDAEMAERIARHRARRGTGWTTLETPRDVVGALAAHATTPTLVDCLTLWLSNALLA
                     SADLDAEIERLEAALAQAAAPLVLVANEVGFGIVPDNPLGRRFRDAQGLLNQRIAARA
                     DRVVLVVAGLPLTIKGEK"
     regulatory      3033..3229
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            3366..3719
                     /locus_tag="VIQ50_08645"
     CDS             3366..3719
                     /locus_tag="VIQ50_08645"
                     /inference="COORDINATES: protein motif:HMM:NF019460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1636 domain-containing protein"
                     /protein_id="HEY9360488.1"
                     /translation="MYVCITCRHPGEPESEPRPGAILAAATAQAAECSGVVIRPVRCL
                     ANCTRGLSAAVRCNGSWTYVFGGLDSACGPALVDGARLLASASDGIMPWRGRPQALKR
                     GLIARVPPLDFKERE"
     gene            3716..4753
                     /gene="cobW"
                     /locus_tag="VIQ50_08650"
     CDS             3716..4753
                     /gene="cobW"
                     /locus_tag="VIQ50_08650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006700272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin biosynthesis protein CobW"
                     /protein_id="HEY9360489.1"
                     /translation="MNNSSARVPCTIVTGFLGAGKTTLIRHVLTHADGRRLAVIVNEF
                     GDVGIDGEILKGCGDEACPQDNIVELANGCLCCTVADDFVPALDTILARTPLVEHIVI
                     ETSGLALPKPLVQAFQWPAIKSRVTVDGVVAVVDGAALAEGRFAADPEALARQRNADA
                     ALDHDNPIDEVFDDQIACADLVVLNKLDLLDAAGADKATAMVQRALPRAVKIVPVANG
                     KVDASALLGLGIGTENDIANRRTRHDAEMEHDHDDFESFVLPLPEISDPASLAARIAA
                     AAAQASVLRVKGFAAVTGKPMRLLVQAVGARVSHHYDRAWTAEEVRQGQLVIIGMKGL
                     DHQGIARALLG"
     gene            4757..>6095
                     /locus_tag="VIQ50_08655"
     CDS             4757..>6095
                     /locus_tag="VIQ50_08655"
                     /EC_number="6.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobaltochelatase subunit CobN"
                     /protein_id="HEY9360490.1"
                     /translation="MHLLATTAASVDDLVEAVDLRQPPGDIAILSFADSDLSGLAGAW
                     TAQQKVLPTVRLANLRDLRHPLSVDLWVDGVGRHAKVILVRLLGGLDWWRYGVERLSS
                     VARERAIALAVLPGEDRDDPRLAEASTLPVGELNTLLGFFREGGSENLAALLRRLASH
                     AGSFIDVTEPRTVPRTTGYIPGEGAVDLDRLLAHCPRGCPRIPIIFYRAMLLAADTAP
                     IDALCRALAERGLAPAPLVVPSLKDQAAAEFIRTALARLQPAIIVTATAFAAAAGGGE
                     PTPFDDVDVPVLQAVIATTRRSAWSQSPRGLGPADLAMHVLLPELDGRVLQGVIAFKG
                     PLPTQEDLCFTALGSLPEADRVAILADRIAALVALQTKPRAERRVAILLPDYPGAPGR
                     AGYAVGLDVPASVVALLSDMEKASYAVAGAPKSSRAILDALRRPSNDAALSLDR"
BASE COUNT         1063 a         1915 c         2001 g         1116 t
ORIGIN      
        1 cccgcgcgta tggtggggct catgtcgagg gcgccttgat gggggatggc cgccgtgcgg
       61 cacaaacggc cgatattcgg gctgcgcttg gactttaccg ttgtgccgac gcaatcctga
      121 tcggaattat tgcctcgttc gccgctgctg tcatcgcgct aggctgagga ggcgatcgat
      181 atcgatgtgg gcctcgagat gggcggcgag ccgatccagg gtttcatcga ttaacccatc
      241 ataggagatc gctgcgccat ccgcggcaaa gcgccggagc cacgcggagc gctgtcgatc
      301 gtccgtaaac aggccgtgga tataagtccc aacgactcgt ccgtcgggcg aaaccgctcc
      361 ctcgggggat ccgtcggaaa ggcgcgcaaa gggccgcgag cgatcggggc cctcggtcag
      421 gcccatatgc atttcgtagc cgcagaccgg gatgccgtca ctggtgacgc cctgcacgcg
      481 ctcgagtcgc ttatcgccgg tgagtgttgt ttcgacatcg agcaaaccca ggccgtcaga
      541 cgcaccaatg gagccctcta gtccaagcgg gtcgcgtatc gtgcgtccca gcatctgata
      601 tccgccgcac agtcccaaaa ctcttccgcc gcgtcgcacg tgtgcggcga tatcgatgtg
      661 gaagcctgcg ttctgaagcg cgtccaagtc ggagatcgtc gccttcgcgc cgagcaggat
      721 gacgagatcg gcgttgccgg gcagggcatc accgggccga acccgcacca gatcgactgc
      781 aggctcggcc tccagtgggt cgagatcgtc gaaattggcg acgtggggaa gaattgggac
      841 ggcaatcttg atccgcgcgt ttggcttggc agtcgagggg ccgtccagtc ccagagcgtc
      901 ttccgccgga agcagccggg catcggcaaa gaaaggcaca agaccgagtg actcccatcc
      961 agtggcgcgc gcgatggtcg tcatgccgtc tgcgaacagc gtcgggtcgc cgcgaaactt
     1021 gttgacgaga aagccgcgaa tttgcgcagc atcggtcgca tcgatcacgc ttttggtgcc
     1081 gacgagactc gcaattacgc cgccgcggtc gatgtcgccg attagcacaa ccgggatatc
     1141 ggcggcgcgc gcaaatccca tgttggcgag gtcgttcgcg cgcagattta cttctgatgc
     1201 gctgccggcg ccctcgacga gcacgatgtc cgcgtcttgt ttgaggcggg catagctgtc
     1261 gagcacgaag cgcgccagat ccggcttcat gcgctgatag gcggcggcct ttgcaacccc
     1321 atgaacgcag ccctgcacca ccacttgtgc gccgatctcg ctctgtggct tgagcagcac
     1381 aggattcatg tgcacgctcg gcggcgtgcg tgcggcacgc gcctgtaacg cctgtgcgcg
     1441 gccgatctcg ccgccatcag ccgtcacggc cgcgttgttc gacatgtttt gtggcttaaa
     1501 cggtcgcacc ttgagcccgc ggttcgccaa agcccgtgcc aggcccgcaa caatcagcga
     1561 cttgccgacg tcggagcccg taccctggaa catgagtgcg cgtgcgggca cgctcagaac
     1621 tcgatgccgg gctgagcttt cacgccggcc gcaaaatggt gcttcaccaa tgtcatctca
     1681 gtaacgagat cggctgcggc gatcaactca ggcttagcat tgcggccggt gacggcgacg
     1741 tgaaggcttg gccgtcgcgc cttcagcgtg gtgacgacgg aatgcacgtc gagatagtca
     1801 tagcgcaggg caatattgag ctcgtcgagg ataacgaggc cgatggtcgg gtcggccatg
     1861 agttctatcg ccttcgccca ggcctgctcc gcggcggcga tgtcacgctt gagatcctgc
     1921 gtttcccagg tgaaaccctc gcccatcgtg tgccaggaga cttgatcggc aaacaccgcg
     1981 agcgcgtcgc gctccgccga gtgccacgct cctttgatga attggacgac acctacgcga
     2041 tggccgcggc cgagcatgcg cagcgcgagg ccgaaggcgg cagtggattt gcctttgccg
     2101 gtgccggtat gaacgatgag gaggcccttc tccatcgtct tggcgacgac ctcggcatcc
     2161 tgtaccgcct tgcgctttgc catcttggcg cgatgacgct cggcctcgtt ctcgtcaatc
     2221 ggtctgctca tttctccccc ttgatggtga gcggcaatcc ggcgacgaca aggacgacgc
     2281 gatccgcgcg cgcggcaatg cgctggttaa gcagcccctg agcatcccgg aaacgacggc
     2341 cgagaggatt atcgggcacg atgccaaacc cgacttcgtt agcgaccagc acaagcggtg
     2401 ccgcggcttg ggccaatgca gcttcaaggc gctcgatctc cgcatcgaga tcagcgctcg
     2461 caagcaatgc atttgaaagc cagagcgtca aacaatcgac gagggtgggc gtcgttgcgt
     2521 gggcggcaag cgccccgacg acatcgcgcg gcgtctcgag ggttgtccag ccggtcccac
     2581 gtcgggcccg atgcctggca atgcgctccg ccatctccgc atcgcctggt tcggctgttg
     2641 ccacatagat ccatggcggt ggcgaggccg taatcaagcg ctcggcgtac cagctcttgc
     2701 ccgagcgagc acccccgaga acgagcgtga gccgggcgct gcaggatgca gcgggggtcg
     2761 ccaagacttc tacgcgccgg gaacgagttg accgatatgg gcaagcgccg atcttgcaaa
     2821 gagagacgaa accgccacaa gcgccatgcg gcaatgcaga cgtaagttca tgacatcccc
     2881 catgtgcctt gcggagcggc cgcggcctcg gcaacgcgtt cccatttcct tcccaaacgg
     2941 gtgggagtcg acgaccgcat gactataacc gccggcacat cgatcgcaag cgcgcaccgc
     3001 atcggcattg acaaagtgga gatggccgcc gttaagtggc cgcgatcgac ggtctctcag
     3061 tcgagagcga acagggaatg cggtgcggaa cgatgttcca atgccgcagc tgcccccgca
     3121 actgtaagcg gcgagcccgt gccacattgc cactgggaca aaccccggga aggcggtgac
     3181 gggcggtgac ccgcgagcca ggagacctgc cgttgatttc ggtcgtggct cgggcggggt
     3241 gcctcggcgc ggatcgattt tcaatcaagc acccggtcgg ggcctcgccc cgcggagcgt
     3301 cacgggtgaa ttctattgga cagccgagcg ggaccgatgc cgcggcatcc accgacgctg
     3361 cgactgtgta cgtctgtatt acgtgccgac atcccggcga accagagagc gaaccccgac
     3421 ccggtgcaat cctggcagcg gcgacggcgc aagctgccga atgcagcggc gtggtgatcc
     3481 ggccagtgcg gtgcttggcg aactgcacgc gcggtttgag cgctgccgtg cgctgcaatg
     3541 gctcgtggac ctatgtgttc gggggccttg actcggcttg cggcccagcg ctcgtcgacg
     3601 gtgcgcgcct gctggcgagc gcaagtgacg gaatcatgcc atggcggggg cggccgcaag
     3661 cgctcaagcg cggcctcatc gcccgcgtgc cacctctcga tttcaaggag cgcgaatgaa
     3721 taattcgtcc gcgcgcgtgc cgtgtaccat cgtcaccggg ttcctcggag ccggcaagac
     3781 gacgttgatc cgccatgtgt tgacccatgc cgatggacgg cggctcgccg tgatcgtcaa
     3841 cgagtttggc gatgtcggca tcgacgggga aattctcaag ggatgcggcg acgaggcgtg
     3901 tccgcaagat aacatcgtag agttggccaa tggctgtctc tgctgcactg ttgctgacga
     3961 cttcgtgccg gcgctggata cgatcctcgc acgaacaccc ctggtcgaac acatcgtgat
     4021 cgagacgtcc gggctcgcgc tgccgaagcc gctggtccaa gcatttcagt ggccggcgat
     4081 caaaagccga gtcaccgtgg atggagtcgt cgcggtggtc gatggtgccg cattggccga
     4141 agggcgcttc gccgccgatc ctgaggctct cgcacgtcag cgcaatgctg acgccgcgct
     4201 tgaccacgat aacccgatcg acgaagtatt cgatgatcag atcgcctgcg ccgatctcgt
     4261 cgtgctgaac aagcttgatt tgttggatgc cgccggggcc gacaaagcaa ccgcgatggt
     4321 ccagcgggcc ttgccgcgtg ccgtcaagat tgtgccggtc gccaacggca aggttgatgc
     4381 gtcggcattg ctcggacttg gtatcggcac ggaaaacgac attgccaatc gccgcacccg
     4441 ccatgacgcg gagatggagc acgatcacga cgattttgaa agcttcgttc tgccgctgcc
     4501 ggaaatttcc gatcccgcaa gcctcgccgc gcgcattgcg gctgcggctg cgcaagcgag
     4561 cgttctacgc gtcaagggat ttgcggctgt gaccggtaag ccgatgcgtc tgctcgtaca
     4621 ggcggtcggc gcgcgcgtca gccatcacta cgatcgcgcc tggaccgccg aagaggtaag
     4681 gcaagggcag cttgtcatta tcggcatgaa gggactcgac caccagggta tcgcacgcgc
     4741 gctgctggga tgagagatgc atttgctggc gaccaccgcg gcttccgtcg acgacctggt
     4801 cgaagccgtc gatctgcgcc agcctcccgg ggacatcgcg attctgtctt tcgcggacag
     4861 cgatttgtcc ggcctggcag gtgcctggac ggcacagcag aaggtgctcc cgaccgtccg
     4921 gctcgcaaat ttgcgggatc tgcgccaccc actctcggtc gacctttggg tcgacggagt
     4981 tggaaggcat gccaaggtca tcctggtgcg cctgctcgga gggctcgact ggtggcgtta
     5041 cggcgtcgag cggctgtcgt cggttgcgcg cgaaagggcc atcgcgcttg cggtactccc
     5101 gggcgaggac cgtgacgatc ctcgcctcgc cgaagcgtcc accttgccgg tgggtgaact
     5161 caacacgctg ctcgggttct ttcgcgaagg cgggtcggag aatctggcag cgctgcttcg
     5221 gcgccttgcg agccatgcgg gatcgttcat cgacgtaacg gaaccgcgca cggtgccgcg
     5281 cacgacggga tacatccccg gtgaaggcgc tgtcgatctc gaccggctcc tcgcgcattg
     5341 tccacgtggc tgtccccgca ttccgatcat cttctatcgc gcgatgctgc tcgccgccga
     5401 tacggcgccg atcgatgcgc tgtgtcgagc tctggcggag cgcggtcttg cgcctgctcc
     5461 gctagtggtg ccgagcctca aggatcaagc ggcggccgag ttcatacgca cggcgctcgc
     5521 gcggctccag ccggcgatca tcgtgaccgc gaccgcgttt gccgcggctg cgggcggcgg
     5581 cgagccgacg ccgtttgacg acgtcgatgt gccggtgctg caggctgtga ttgcaacaac
     5641 ccggcgttcg gcttggtcgc aaagcccgcg cgggctcgga cccgccgacc tggcgatgca
     5701 cgtcctttta cccgaactcg acgggcgagt gctgcaaggc gtgatcgctt tcaaggggcc
     5761 gttgccgacc caggaggatc tttgtttcac cgcattgggc agtctgccgg aggcggatcg
     5821 ggtcgcaatc ctggccgacc gaatcgcggc gctggtcgcg ttgcagacga agccgcgggc
     5881 tgaacggcgc gtcgcgattt tgctgccgga ttatccaggc gcaccgggcc gggccggtta
     5941 tgccgttggc ctcgacgtgc ccgcgagcgt tgtcgcgctg ttgtcggata tggaaaaggc
     6001 gagctatgcc gtcgcgggcg cgccgaaaag ctcacgcgcc attctcgacg ccctgcgtcg
     6061 gccttcgaac gacgcggccc tgtcgctcga tcgct
//
LOCUS       DATCWM010000443         4147 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_278768, whole genome shotgun sequence.
ACCESSION   DATCWM010000443 DATCWM010000000
VERSION     DATCWM010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4147)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4147)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4147
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_278768"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..355
                     /locus_tag="VIQ50_08660"
     CDS             <1..355
                     /locus_tag="VIQ50_08660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9360491.1"
                     /translation="MPPSLPHIRAGKLRALAVTTATRSEALPEVPTVAETVPGYEASA
                     FFGMAVPKGTPPEIVDKLNKEVNAALADANIKARLADLGGILIPGSPTDFGKVVADET
                     EKWAKVIKAGGVALE"
     gene            388..2112
                     /gene="araD"
                     /locus_tag="VIQ50_08665"
     CDS             388..2112
                     /gene="araD"
                     /locus_tag="VIQ50_08665"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007695873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinonate dehydratase"
                     /protein_id="HEY9360492.1"
                     /translation="MTRKRPEDLRSHRWLGVNDLRAFGHRSRLRQFGYDAADWAGRPV
                     IGIINTWSEINACHAHLRARADDVKRGVLQAGGFPIELPAMSLAEPFVKPSTMLYRNF
                     LAMEAEELLRSHPLDGAVLLGGCDKTTPGLIMGAISMGIPAIYVPAGPMLRGNWRGEF
                     LGSGSDVWKYWTEKRAGRITEEQWSEMESGIARSFGTCMVMGTAATMMAIAEALGLTL
                     PGASSIPAADSSHPRMCAAVGRRIVDMVWEDLAVERILTPAAFDNAIKVHMAMGGSTN
                     AIIHVIAMARRAGVALDVERFDRISREIPVLANVRPSGKYLMEDFFYAGGLRALMLEL
                     KDRLDLSALTVTGKTLGENIDGAEVYLRDVIHPLADPIYPQGATAVLTGNLAPRGCVM
                     KPAAADQRFLKHRGPALAFEDYNHMAREIERDDLAVTPDHVLVLKNAGPKGGPGMPEW
                     GMLPIPKKLVQAGVRDMVRISDGRMSGTSYGACILHVSPESFVGGPLAFVETGDAIEV
                     DVSARRIHLHVGEEELNRRRAAWKQPAPRYVRGYGAMFSAHNGQADEGCDFDFLAARG
                     QIPEPEIH"
     gene            2140..3183
                     /locus_tag="VIQ50_08670"
     CDS             2140..3183
                     /locus_tag="VIQ50_08670"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEY9360493.1"
                     /translation="MKIGLFDHVEHGNRPLATLFDERLAFAKAADDAGIYCLHVAEHH
                     ATPLNMVPVPSVYLGAVARATTRMRLGPLVYLLPLYSPLRLIEEICILDHLSHGRMEV
                     GVGRGVSPFELKYHKIDHEESRAIFIDAFNCISAGLTTDALSYSGKYYQFEDVPIALR
                     PLQKPHPAFWYGSSNTTGAAWAGEHGMHFLSLGPTPFAKANIDAFRQALSKRGGPAQP
                     KDEFPGGTAIGVLRHIFVAETDAEAKRFGKPAMELHLAHLNWLRDRHGVSGSTSRLNV
                     PRGATFEDCVADGSAIAGTPQRVREEIERQVDELGVNYLLSYLFLGAMTLEEALRSLA
                     LFSREVMPRLAQL"
     gene            3284..>4147
                     /locus_tag="VIQ50_08675"
     CDS             3284..>4147
                     /locus_tag="VIQ50_08675"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY9360494.1"
                     /translation="MTNGRVTGVRSVELGVRDLHQSAEFYTKVWALEPVSPEGDGMHF
                     RATGGEHHVLTIRERPKPALLGVHFSANDRAAVDALCAKARSYGVDVENDPAPLDRSA
                     GGGYGFRFLTPDGLPMSISADLVQHPSIVLDRSRPTKISHVVLNSARTDDQVPFFIDV
                     LGFKVSDSTHMMEFLRCSADHHSVAIFRNNGPSLNHVAYELPNMDGLMRGTGRVKQSG
                     FEIAWGIGRHGPGSNVFSYFIEPNGFVAEYTTELDQLDDATHVPQGPDYWKKMMPLPD
                     RWGTAGAPSNRM"
BASE COUNT          722 a         1340 c         1356 g          729 t
ORIGIN      
        1 tatgccgccc tcgctgcccc atatccgcgc cggcaagctg cgggcgctgg cggtaacgac
       61 ggcgacgcgc tcggaggcgc tgcccgaggt gccgaccgtg gccgaaaccg tgccggggta
      121 tgaggcgagc gccttctttg ggatggcggt gccgaaggga actccgccgg agatcgttga
      181 caagctcaac aaggaggtta acgccgcgct cgccgatgcg aatatcaaag cacgcctggc
      241 ggatctcggc ggcatcctga ttcccggtag ccccaccgat ttcggcaaag tcgttgccga
      301 cgaaaccgag aagtgggcca aagtgatcaa agccgggggc gtggcgttgg aatagcttaa
      361 ggcacgaccc ggtcccggat cggtgcaatg acccgcaagc gccccgaaga tttgcgcagc
      421 caccgctggc tcggcgtcaa cgacctgcgc gcgttcggtc accgctcgcg cttgcgccaa
      481 ttcggctacg acgcggccga ctgggccggc cgacccgtca tcggcatcat caacacctgg
      541 agcgagatca atgcctgcca cgcgcacctg cgcgcgcggg cggatgacgt caagcgcgga
      601 gtgctgcagg ccggcggctt tcccatcgag ttgccggcga tgtcgctggc ggagccgttc
      661 gtcaagcctt cgaccatgct ctaccgcaat ttcctcgcca tggaggcgga agagctgctg
      721 cgcagccatc cgctcgatgg cgcggtgctg ctcggcggct gcgataagac cacgccgggt
      781 ttgatcatgg gcgccatcag catgggcata ccggcgatct acgtgccggc cggccccatg
      841 ctgcgcggca attggcgggg cgagtttctc ggttcgggct ccgacgtgtg gaagtactgg
      901 accgagaagc gcgccggccg catcaccgaa gagcagtgga gcgagatgga gagcggcatc
      961 gcccgctcgt tcggcacctg catggtcatg ggcacggcgg cgaccatgat ggcgatcgcg
     1021 gaagcgctcg gcctgacgct tccgggggcc tcctcgatcc cggcggccga ttccagccac
     1081 ccgcgcatgt gcgccgcggt agggcgccgt atcgtcgaca tggtgtggga ggatctcgcg
     1141 gtcgagcgaa ttctcactcc cgctgccttc gacaatgcca tcaaagtcca catggcgatg
     1201 ggcggctcga ccaatgccat cattcatgtg atcgcgatgg cgcgccgggc cggcgttgcg
     1261 ctcgacgtcg agcgcttcga tcggatttcg cgggagattc ctgtgctcgc caatgtccga
     1321 ccgtcgggaa aatatctgat ggaggatttc ttctacgccg gcggcctgcg cgcgctgatg
     1381 ttggagctca aggaccggct cgatctctcc gctctgacgg tgaccggaaa gacgctcggt
     1441 gagaacatcg acggcgcgga agtctatttg cgcgatgtca tccatccgct cgccgatccg
     1501 atctatccgc agggcgcaac cgccgtgctg accggcaacc tcgccccacg cggctgcgtg
     1561 atgaagccgg cggcggcgga tcagcgcttc ctcaagcatc gcgggcctgc gcttgcgttc
     1621 gaggattaca accacatggc gcgcgagatc gagcgcgatg atctcgcggt cacgccagac
     1681 cacgtcctcg tgcttaagaa tgccggcccc aagggcggac ccggcatgcc ggaatggggc
     1741 atgctgccga ttccgaaaaa actagtgcaa gcgggggtgc gcgacatggt gcgcatctcg
     1801 gacggacgca tgagcggcac gagctacggc gcctgcatcc tgcatgtttc gccggagagc
     1861 ttcgtcggcg ggccgctagc gttcgtagag accggcgacg ccatcgaggt ggacgtgtcg
     1921 gcgcgccgca tccacctgca cgtcggcgag gaggagctca accgccgccg cgcggcgtgg
     1981 aagcagcctg cgccgcgcta cgtgcgcggc tacggcgcca tgttctccgc ccataacggt
     2041 caggccgacg aaggctgcga ttttgatttc ctcgccgcca ggggccagat tcccgagccg
     2101 gaaatccact gatcgcccta ccggcgcgcc gaggccgcaa tgaagatcgg actcttcgac
     2161 cacgtcgagc acggcaatcg gcccctcgcg accttgttcg acgagcgtct cgccttcgcc
     2221 aaggccgccg atgatgccgg catctactgt ctgcacgtgg cggagcatca cgcgacgccc
     2281 ctcaacatgg tgccggtgcc cagcgtctat ctcggcgcgg tggcgcgcgc gaccacgcgc
     2341 atgcggctcg gtccgctggt ttatctcctc ccgctgtact cgccgctgcg gctgatcgaa
     2401 gagatttgca ttctcgatca tctcagccac ggccgcatgg aagtgggggt cggccgcggc
     2461 gtatcgccgt tcgagctcaa atatcacaag atcgaccacg aggaatcgcg cgcgatcttc
     2521 atcgatgcgt tcaactgcat cagcgcgggc ttgaccaccg acgcgctgag ctattccggc
     2581 aagtattacc aatttgaaga cgtgccgatt gcgttgcggc cgctgcagaa gccgcatccc
     2641 gcgttctggt atggctcttc caacaccacc ggcgccgcct gggcgggcga gcacggcatg
     2701 cactttttga gtctcggacc gacgccgttc gccaaggcca acatcgacgc gttcaggcaa
     2761 gccttgtcaa agcgcggcgg cccggcgcag cccaaggacg aatttcccgg cggcacggcg
     2821 atcggcgtgc tgcgccacat cttcgtggcc gagacggacg cggaggcaaa acgattcggc
     2881 aagccggcga tggagctgca tctggcgcat ttgaattggc tgcgcgacag acacggcgtc
     2941 agcggctcga cctcgcgcct caatgtgccg cgcggcgcga cattcgagga ttgcgtggcc
     3001 gacggatcgg cgatcgccgg gacgccgcag cgcgtgcgcg aggagatcga gcggcaggtg
     3061 gacgagctcg gggtgaacta cctgctcagc tatctgtttc tgggtgccat gacgctcgag
     3121 gaggcgctgc gctcgctcgc tttgttttcg cgcgaggtga tgccccgtct cgcgcagctc
     3181 tgatcggcgt ttccttcaac gctgccggtg tgacgccgct ctggcccttt gcatcggact
     3241 gtgcgaaatt ccccagccaa ttgacggcaa gaggtcacga cccatgacaa acggcagggt
     3301 tacgggcgtt cgcagtgtcg agctcggcgt tcgcgatttg catcaatcgg cggagttcta
     3361 caccaaggtg tgggcgctgg agcccgtctc gcccgagggc gatggcatgc atttccgcgc
     3421 taccggaggc gagcatcacg tgctcaccat ccgggagcgg cccaagcccg cgctcctggg
     3481 ggtgcatttc tccgccaatg accgcgcggc ggtcgatgcc ctgtgcgcga aggcgaggag
     3541 ctatggagtg gacgtcgaga acgacccggc gccgctcgat cgcagcgccg gcgggggcta
     3601 cgggtttcgc tttctcactc ccgacggttt gccgatgagc atatccgcgg atctcgtgca
     3661 gcatccgagt atcgtcctgg atcgctcgcg gccgaccaag atcagccacg tcgttctcaa
     3721 tagcgcacgc actgatgatc aggtcccgtt cttcatcgac gtgctcggct tcaaggtgtc
     3781 cgacagcacg cacatgatgg aattcctgcg ctgcagcgcg gatcaccaca gcgtggcgat
     3841 cttccgcaac aacggaccct cgctcaatca cgtggcttac gagctgccga acatggacgg
     3901 gctgatgcgc ggtaccggtc gcgtcaagca gagcggattc gagatcgcgt ggggcatcgg
     3961 acggcacggt cccggcagca acgtgttctc gtatttcatc gagcccaacg gttttgtcgc
     4021 ggaatacacg accgagctcg atcagctcga tgatgccacc cacgttccgc agggtccgga
     4081 ctactggaaa aaaatgatgc cgctccccga ccgctgggga acggcaggag cgccgtcgaa
     4141 ccggatg
//
LOCUS       DATCWM010000444         2203 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_510695, whole genome shotgun sequence.
ACCESSION   DATCWM010000444 DATCWM010000000
VERSION     DATCWM010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2203
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_510695"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..118)
                     /locus_tag="VIQ50_08680"
     CDS             complement(<1..118)
                     /locus_tag="VIQ50_08680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014761998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HEY9360495.1"
                     /translation="MSWSLNIGTIAGTAVRVHVTFLLFLGWIFAASWVAGGAA"
     gene            265..594
                     /locus_tag="VIQ50_08685"
     CDS             265..594
                     /locus_tag="VIQ50_08685"
                     /EC_number="4.2.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HEY9360496.1"
                     /translation="METREVASMAEKLTGNARKSALAKLHGWSEVKNRDAITRQFTFS
                     DFNEAFGFMARAALVAEKLDHHPGWFNVYNKVEVTLATHDAGGVTERDIKLAQAMDRL
                     AKASEGA"
     gene            617..985
                     /locus_tag="VIQ50_08690"
     CDS             617..985
                     /locus_tag="VIQ50_08690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011155971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YkvA family protein"
                     /protein_id="HEY9360497.1"
                     /translation="MVGERAFHWHDPREVERVRREFWRKARRVAARLPFAEDLLAAYY
                     CAFDRATPVQVKAALVAALAYFVLPLDAVPDMLPVIGFTDDATVLLTALRMVAGRVRP
                     EHRAAARVALARMKVGRAGA"
     gene            complement(1031..2005)
                     /locus_tag="VIQ50_08695"
     CDS             complement(1031..2005)
                     /locus_tag="VIQ50_08695"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003960 - NADPH:quinone reductase activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0070402 - NADPH binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH:quinone oxidoreductase family protein"
                     /protein_id="HEY9360498.1"
                     /translation="MKAVLCHRFGTPDDLVLGDIPDPVAGAGEVVAKVAAVGLNFFDT
                     LIVAGKYQTKPPFPFSPGGEFAGVVESVGAGVKAFKPGDRVMGYTNFNAARERTAVAA
                     DNIVKLPPDLDFDRAAALTITYGTAYHALKYRALMRPGETLAVLGASGGVGLAAIEVG
                     SIMGGRVIACASTDGKVAFARAHGAHEVVNYEREDLRAALKRLGGEHGIDVIFDPVGG
                     RYSEPALRSLAWEGRHLVVGFAAGEIPKLPLNLVLLKGCAVLGVFWGAWVRHAKEDYK
                     EAIATLARWCAEGKLSCHVQKIYPLAETPAALKALANREVMGKLVVRV"
BASE COUNT          391 a          709 c          735 g          368 t
ORIGIN      
        1 tcgccgcgcc accggcgacc cagcttgcgg cgaaaatcca gcccagaaac aacaggaagg
       61 tcacgtggac gcggaccgcc gttccggcga tcgtgccgat attgagcgac caggacatcg
      121 aggcctccgg gcaaaagcaa agacggcgca atgggctgcc gttgatcatt cggggacgca
      181 agatcaactg gcgggctctc gtgtaaataa gtaggcgctg gcagggcctt tgcgagtggc
      241 tggcggagag caattcgtgg cacaatggaa acgcgcgagg tggcgtccat ggcagagaaa
      301 ctgaccggca atgcgcgcaa gagcgcgctc gccaagctcc acggctggag cgaggtgaaa
      361 aatcgcgacg ccatcactcg gcaattcacc ttcagcgact tcaacgaggc gttcggcttc
      421 atggcccgcg cggcgctggt cgcagagaag ctcgatcatc atccgggatg gttcaacgtc
      481 tacaacaagg tcgaggttac gctcgcgacg catgacgccg gcggcgtgac cgagcgtgac
      541 atcaagctcg cccaagccat ggatcgcctg gccaaagcgt ccgagggcgc ctgatgatgc
      601 cgttcgggca agccgcatgg tgggggaacg cgcctttcac tggcacgacc cgcgcgaggt
      661 tgagcgcgtg cggcgggagt tctggcgcaa ggcccggcgg gtggcggcac ggttgccgtt
      721 cgccgaggat ctgctcgctg cctattactg cgccttcgac cgtgcaaccc cggtgcaggt
      781 gaaggcagca ctcgtggccg cgctcgccta tttcgtactt ccgctcgatg cggtgcccga
      841 catgttgccg gtcatcggtt tcaccgacga cgcaacggtg ctgctcacgg cgctacgcat
      901 ggttgctggg cgcgtgcgtc cggagcaccg cgcggcggcg cgcgttgcgc tcgcgcgaat
      961 gaaggtggga agggcaggag cgtaggctat ccgcgcgggc tatatgagct gatcagctga
     1021 tttcggcgcg tcacacgcgc accaccagct tacccatgac ctcccggttg gccagtgcct
     1081 tgagcgccgc cggtgtctcg gcgaggggat agatcttctg gacgtggcac gacagcttgc
     1141 cctccgcaca ccaacgggcg agcgtcgcga tggcctcttt gtagtcttcc ttggcgtgcc
     1201 gaacccacgc cccccagaac acgccgagca ccgcgcagcc cttgagcagc acaagattga
     1261 gcggcagttt cggaatctcg ccggcggcaa agccgacgac gaggtgccgc ccctcccagg
     1321 caagggagcg cagtgccggc tcgctgtagc ggccaccgac cgggtcgaat atcacatcga
     1381 tgccgtgctc gccgcccagg cgtttgagcg cggcgcgcaa atcctctcgc tcatagttta
     1441 ccacctcgtg cgccccgtgc gcgcgggcaa aggcgacctt gccgtcggtg gaggcgcagg
     1501 cgatcacgcg cccgcccatg atgctgccga cctcgatggc ggccagcccg accccgccgg
     1561 acgcccccag cacggccagc gtctctccgg ggcgcatcag cgcgcggtat ttgagcgcgt
     1621 gataagctgt gccgtaggtg atggtcagcg ccgccgcgcg atcgaagtcg aggtcggggg
     1681 gcaacttgac aatattgtcg gccgcgacgg ccgtgcgttc gcgcgcggcg ttgaaattgg
     1741 tgtagcccat gacgcggtcg ccgggtttga acgccttgac accggcgcca acactttcga
     1801 cgacgccggc gaactcgccg cccggggaga atgggaacgg cggcttggtc tggtatttgc
     1861 cggcaacgat cagcgtgtcg aagaaattca ggccgaccgc cgccactttg gccacgacct
     1921 cgcccgctcc ggctacggga tcagggatgt ccccgagcac gaggtcgtcg ggcgttccga
     1981 agcggtggca gagcacggct ttcatcgggt gtagctcgct cgaaatcgtc tgggcaggct
     2041 catagcacag caaggcgcgc ttgaacggag gggatcgggt acacctgccc ttgcctgccg
     2101 attataggcg caccgcgcgg tcgatccgcc ttcacattgc cgaattccgc aagcagttca
     2161 tggccttcgc aatttcctga ttgggcgtgc cgcaggccgc ccc
//
LOCUS       DATCWM010000445         5947 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_408329, whole genome shotgun sequence.
ACCESSION   DATCWM010000445 DATCWM010000000
VERSION     DATCWM010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5947)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5947)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5947
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_408329"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..943
                     /locus_tag="VIQ50_08700"
     CDS             <1..943
                     /locus_tag="VIQ50_08700"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9360499.1"
                     /translation="LGFGALVRARPARAAYPERPIKIVVANTPGGPSDIIARIMAATM
                     QEAMGGSVFVENKGGAGGNIGMGLVARADADGYTILLSTSAYAVNPGLYQTLPYDPFK
                     DFTAICELAVSPHVFAVKPDLGVGTVKEFAALAKANADKFNVSTPPIGTTPHLQAEVL
                     KLREGLQGMATVVFAGGGDALKALLAGTVQLSSGVLAPAHPHIKAGTIKGLAVTGRTR
                     WRDLPDIPTMLEAGYPDFVFETYTALMAPVKTPPDVVARLEQVALEVLQRPDIRAKLT
                     ESGFEVTAKPGKEHMVRVAREVPMFADIISRAGINKL"
     gene            complement(996..2192)
                     /locus_tag="VIQ50_08705"
     CDS             complement(996..2192)
                     /locus_tag="VIQ50_08705"
                     /inference="COORDINATES: protein motif:HMM:NF022515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2865 domain-containing protein"
                     /protein_id="HEY9360500.1"
                     /translation="MIGTAIRIGLRAAGAALPVLIFCAAPAAAQFGFPFSAPAPPPAP
                     TAPNAAPAPGAGGRNQTCLRLESQLAAVDRGAGIDPAKAEQIKRYEDAASKQQAEVDR
                     LGQQSQRLGCQGGGFFALFSGQSPQCGPLNNQIQQMRANLDRTLTEIQRLQGNSGERE
                     GQRRGILVALGQNDCGPQYRQYVTAGPGGFFDNLFGGGGYIAPAPNAPLAGTYRTLCV
                     RTCDGYYFPISYSTVPSKFPEDEQICHRQCPAAEVALYSHRNPGEDVSRAVSTSGRLY
                     TDLPTAFSYRKQVNAACNCRLPGQSWAEALQQGSDQTIERGDIVVTEERAKQLSQPRF
                     DAQAKAVNASQTPARGKGADEASSAPASPAGAEQQPPAPAEQKGEQEPGKRKVRAVGP
                     TFYPVR"
     gene            2401..3297
                     /locus_tag="VIQ50_08710"
     CDS             2401..3297
                     /locus_tag="VIQ50_08710"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9360501.1"
                     /translation="MGALSLSQFIDLVVGGLAIGCVYSLIALGFAMIMRATNIIHFAQ
                     GEVMMLGCMCGLTSLWLLPALPLPVVIAVGMASSGLIAVAMELAVYRTLRRRRVPIMN
                     IITATVGMSILCINAARIIWGSEPLRFPELFATSAYEFGGVRISPQLFWIMVMGVAIM
                     GALQLFLKHTPTGLAMQAVAQDQEAAQLMGANLTRMMAYTFAISGMMAGAAGIMLGSM
                     FFAFFEMGFITGVKGFVAATLGGLGSIAGAMLGGILFGLIETFSTVFLSSAYKDGIGM
                     ILLIAILLVLPSGLVGLWQKRR"
     gene            3279..4310
                     /locus_tag="VIQ50_08715"
     CDS             3279..4310
                     /locus_tag="VIQ50_08715"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9360502.1"
                     /translation="MAKAQVTASSDQGAHRRGSVHGAALLVVAALIALPWVEPDKFAL
                     HVISLIAIASIAAMGLQVLLGYSGQLSIGQAAFYGIGAYTSAFLTAKLGVPFPLALIG
                     AGVAAAIASLLMVPITRLTGAYLAVATLGFSIIVYLFIKNEEWLTGGSYGFIGIPRAE
                     LFGYVLRDPRSSYYLNVGVAAIVYFVFARIEGSRFARAINAIRQDADAARASGIRVTL
                     LKSECFVIAAFVAGLAGSLYAHEVRYLAPNDFTFWKSIEILIMVVIGGVGSLAGAILG
                     AAVVVGLPEYLRAIGDYRMLVFGAILIATMLFGEGGLAALVAASGRRLCAVAMRLIPK
                     LPASRKAAQ"
     gene            4307..5110
                     /locus_tag="VIQ50_08720"
     CDS             4307..5110
                     /locus_tag="VIQ50_08720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9360503.1"
                     /translation="MSTAAPGECLLEARGVTRRFGGLVAVDAVDLAVRRGSVHGLIGP
                     NGAGKTTLLNLIAGVHRVGSGLLRFAAQDITRDSTAKRARAGIRRTFQNLKLFGEMTA
                     LENAAIGLHAQTHGGFFDAVFSTPRHRREERSIADRSMAALHFVGLAGLAQARADSLA
                     YGHRRLLEIARAIVARPALLLLDEPAAGLNVTEAAHVSDLIARIRDEGTTVVLVEHHM
                     DVVMRVSDEITVLNYGRRLAHGTPAQIQEHPAVIEAYLGRAAETDRAQA"
     gene            5097..5837
                     /locus_tag="VIQ50_08725"
     CDS             5097..5837
                     /locus_tag="VIQ50_08725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9360504.1"
                     /translation="MLKLDGVVAGYDDVTCLHGVSLEVRRGEIVTLIGANGAGKSTTL
                     KTVSGLLAPRAGIIEFDGQPIAGRSPDAIVALGLVQVPEGRRVFPELSVEENLRVGAY
                     LVANRAKVRDMLADVYARFPRLAERRRQLAGTLSGGEQQMLAFGRAMMAQPKLLMLDE
                     PSLGLAPRMVDEVMRSIRMFRDSGVTIFLVEQNANLALRLADRAYVMETGQITMTGSG
                     AQLLADARVRASYLGAKTTPETGVARGQ"
BASE COUNT          913 a         1905 c         1988 g         1141 t
ORIGIN      
        1 gctcggcttt ggcgcgctcg tgcgggcgcg cccggcgcgg gcggcctatc ccgagcgtcc
       61 gatcaagatc gtggtggcga acaccccagg agggccttcc gacatcattg cccgcatcat
      121 ggcggcgacc atgcaggagg cgatgggcgg gagcgttttc gtcgagaaca agggcggcgc
      181 cggcggcaat atcggcatgg ggttggtcgc gcgcgcggac gcggacggct acaccatcct
      241 gctgtcgacc agcgcttacg cggtcaatcc cggcctctac cagacgctgc cctacgaccc
      301 cttcaaggac ttcacggcga tctgcgagct tgccgtctcg ccgcacgtgt tcgcggtgaa
      361 gcccgatctg ggtgtcggca cggtgaagga gttcgccgcg ctcgctaagg ccaatgccga
      421 taagttcaac gtgtcgacac cgccgatcgg cactacgcca cacctgcagg cggaagtgct
      481 gaagctgcgc gaaggcttgc aggggatggc aaccgtggtt tttgcgggag gtggcgacgc
      541 gctcaaggct ttgctcgccg gcaccgtgca gctcagctcc ggtgtcctgg ccccggcgca
      601 tccgcacatc aaggccggca ctatcaaggg tctcgcggtc accggccgca cgcgctggcg
      661 cgacctgccc gacatcccga ccatgctgga agcgggctat cccgattttg tctttgagac
      721 ctacaccgcg ctgatggcgc cggtgaagac gccgcctgac gtcgtcgccc ggctcgagca
      781 ggtcgcgctc gaggttctgc agcggccgga tatccgcgcg aagctcaccg aatccgggtt
      841 cgaggtgact gccaagcccg gcaaggagca catggtgcgc gtcgcgcggg aagtgccgat
      901 gtttgccgac atcatttccc gcgccggcat caacaagctc taggtggaat cagcccgtcg
      961 gcgaccggcc ggcgaggtgt ccgggttcct cgcttttacc gcaccggata gaacgtcggc
     1021 ccgaccgccc gtaccttgcg cttgcccggt tcctgctcgc ccttttgttc ggcgggggcg
     1081 ggcggctgct gctcggcgcc agcaggtgag gccggcgcgc tgctcgcctc gtctgcgcct
     1141 ttgcctcggg cgggggtctg gctcgcattg accgccttcg cctgcgcgtc gaagcgtggc
     1201 tgcgagagtt gcttcgcccg ctcctcggtg acgacgatat cgccgcgctc aatggtctgg
     1261 tcgctgcctt gctgcagcgc ctccgcccaa gactggccag gcaggcggca attgcaagcc
     1321 gcgttgacct gcttgcgata gctgaacgcg gtgggcagat ccgtgtagag cctgccgctg
     1381 gtcgacaccg cgcgcgagac gtcctcgccg ggattgcgat ggctgtagag agccacctcc
     1441 gcggccgggc actggcgatg acaaatctgc tcgtcctcgg gaaacttgga cggcaccgtc
     1501 gaataggaaa tcgggaaata gtagccgtcg caggtgcgca cgcacagcgt ccggtaggtg
     1561 ccagcgagcg gagcattggg agcgggcgcg atgtacccgc cgccgccgaa caggttgtcg
     1621 aagaagccgc cggggccggc ggtgacgtat tgccggtact gcgggccgca atcgttctgc
     1681 ccgagtgcga ccaggatgcc gcggcgctgg ccctcgcgct cgccgctatt gccctgcaac
     1741 cgctggatct cggtcaaggt gcggtcgaga ttggcgcgca tctgctggat ctggttgttg
     1801 agcgggccgc attgcggcga ttgtccgctg aacagggcga agaagccgcc gccctggcag
     1861 cccaggcgct gcgattgctg gccaaggcgg tcgacttcgg cctgctgctt tgacgctgca
     1921 tcctcgtagc gtttgatctg ctcggccttc gcgggatcga tcccggcccc ccggtcgact
     1981 gcggcgagct ggctttcgag ccgtaggcac gtctggttgc gcccgcccgc gccgggggcg
     2041 ggggccgcat tgggagcagt tggagcggga gggggcgcag gcgccgaaaa cggaaagccg
     2101 aactgcgccg ctgccggcgc cgcgcaaaag atgaggaccg gcagggcagc ccccgctgcg
     2161 cgcaagccta tgcgaatcgc tgtgccaatc atggagtccc ggcccgacgt cccactatcg
     2221 aggatggaag cgccggaatg gtgaccaaag tgtgaaaacg ctgggccgag aggcgggcgc
     2281 gtcaacacat tcgggggcgg cttgcctgct ccggccactc gaaccgggta gtcggatgca
     2341 ctagccttct tcccccgcag cttccggcga cccacgacct ttccacgcca ggcggacgca
     2401 atgggcgctc tcagcctctc ccagttcatc gacctcgtcg tcggcggcct tgcgatcggc
     2461 tgcgtgtata gcctcatcgc gcttgggttc gcgatgatca tgcgggcgac caacatcatt
     2521 catttcgccc agggcgaagt gatgatgctg ggctgcatgt gcgggctcac gtctttgtgg
     2581 ttgcttccag cgctgccgct cccggtggtg atcgctgtcg ggatggcctc ctccgggctg
     2641 atcgccgtgg ctatggagct cgcggtttat cgcaccctgc ggcgtcggcg tgtcccgatc
     2701 atgaacatca ttaccgccac ggtcggcatg tccattctgt gcatcaacgc tgcgcgcatc
     2761 atttggggct ccgagccgct gcgctttccg gagctgttcg ccacctccgc gtatgaattc
     2821 ggtggcgtgc gcatttcccc gcagttgttc tggatcatgg tcatgggggt cgccatcatg
     2881 ggtgcgttgc agctcttcct caagcacacg ccgaccgggc tcgccatgca ggcggtggcg
     2941 caggatcaag aagcggcgca gctcatgggc gcgaacctga cgcggatgat ggcttatacc
     3001 tttgcgattt ccgggatgat ggccggggcg gccggcatca tgctcggttc catgttcttt
     3061 gcctttttcg agatggggtt catcaccggg gtgaaaggct tcgtcgccgc gacgctcggc
     3121 gggctcggca gcattgccgg ggcgatgctc ggcgggattc tgtttggttt gatcgaaacg
     3181 ttcagcaccg tgttcctgtc atcggcctat aaagacggga tcggtatgat cttgctcatc
     3241 gccattctgc tggttcttcc gtcagggctg gtcggcctgt ggcaaaagcg caggtgaccg
     3301 cctcgtcgga tcaaggtgcg caccggcgcg gttcggtgca tggagccgcg ctgctggtcg
     3361 tggcggcgtt gatcgcgctg ccctgggtcg agcccgacaa gttcgcgctc catgttatca
     3421 gcctcattgc gatcgcctcg atcgccgcga tgggattgca ggtgctgctc ggctattccg
     3481 gacagctctc catcggccag gcggcgttct acggcatcgg cgcttacact tccgcctttc
     3541 tgaccgcgaa gctgggcgtg ccgtttcctc tcgctctcat cggcgccggc gtcgccgcgg
     3601 cgatcgccag cttgctgatg gtgccgataa caaggctcac tggggcttac ctggccgtgg
     3661 ccacgctcgg cttctcgatc atcgtctatc tgttcatcaa gaacgaagag tggctgaccg
     3721 gcggctctta cggcttcatt ggcattccgc gcgcggagtt gttcggatac gtcctgcgcg
     3781 atccccgatc gagctactac ctcaacgtcg gcgttgcggc gatcgtctat ttcgtctttg
     3841 cgcgcatcga aggctcacgc ttcgcccgcg cgatcaatgc catccgccag gacgccgacg
     3901 cggcgcgcgc cagcggcatt cgcgtgacgc tgctcaagag cgagtgcttc gtcatcgccg
     3961 cctttgtcgc cggcctcgcc ggctccctct acgcgcacga ggtacgttat ctcgccccga
     4021 acgacttcac gttctggaag tcgatcgaga tcctcatcat ggtggtgata ggcggcgtcg
     4081 gcagtctggc aggcgccatc ctcggcgccg cggtggtggt cggcttgccg gagtatttgc
     4141 gcgcgatcgg cgactatcgg atgctggtct tcggcgcgat cctgatcgcg accatgctgt
     4201 tcggtgaagg tgggctcgcc gcgctcgttg cagcatcggg gcggcgtttg tgcgccgtgg
     4261 cgatgcggct catccccaag ctgcccgcat cccggaaagc agcgcaatga gcacggccgc
     4321 gcccggcgag tgcttgttgg aggcgcgcgg cgtgacgcgg cgcttcggcg gcctggtggc
     4381 cgttgatgcc gttgaccttg cggtgcgacg cggcagcgtg cacggcctca tcgggccgaa
     4441 cggagccggc aagaccacgt tgctcaatct gattgcggga gtgcatcggg tcggcagcgg
     4501 gttgctgcgc tttgctgcgc aggacatcac ccgggattcg acggccaagc gcgcgcgcgc
     4561 cggaatccgc cgcacctttc agaacctaaa actgttcggc gaaatgaccg cgctggagaa
     4621 cgccgcaatc ggcttgcatg cgcagacgca cggcggattt tttgatgctg tcttctcgac
     4681 gccgcggcat cgccgcgaag agcgcagcat cgccgatcga tcgatggcgg cgttgcactt
     4741 tgtcggcctt gccggccttg cccaggcgcg cgccgactcg cttgcatatg gacaccggcg
     4801 tttattggaa atcgcccgcg ctatcgtcgc gcggcccgcg ctgttgctgc tcgatgaacc
     4861 ggctgcgggc ctcaacgtca ccgaagcagc gcacgtcagc gacctaattg ctcgcatccg
     4921 cgacgagggc acgactgtgg tcctggtcga gcatcatatg gacgtcgtca tgcgtgtgag
     4981 cgacgaaatc acggtcctca actatggccg cagactcgcg cacggcaccc cggcgcagat
     5041 ccaagaacat ccggcggtga ttgaagccta tctcggccgg gcagcggaga cggatcgtgc
     5101 tcaagcttga cggagtggtc gcgggttacg acgacgtcac ctgcctgcac ggtgtttcgc
     5161 tagaggtgcg tcgcggcgag atcgtcacgc tgatcggagc caatggcgcg ggcaagagca
     5221 cgaccctcaa gacggtctcc ggccttctcg ctccacgcgc ggggatcatc gagttcgacg
     5281 ggcagccgat tgccggtcgc agtccggacg cgatcgttgc cctcggactg gtgcaggtgc
     5341 cggaaggccg gcgggtattc cccgagcttt cggtggagga gaatctccgc gtcggcgctt
     5401 acctagtcgc caatcgggcc aaggttcgcg acatgctggc cgacgtctat gcgcgctttc
     5461 cgcgcctggc ggaaagacga aggcagctcg cgggtacgct ctcaggcggc gaacagcaga
     5521 tgcttgcctt cggtcgggca atgatggcgc agcccaagct cctcatgctc gacgagccgt
     5581 cgctggggct cgccccgcgc atggtggacg aggtgatgcg ctcgatccgc atgttccgtg
     5641 actccggcgt gacgatcttc ctggtcgagc aaaatgccaa cctagcgttg cgccttgccg
     5701 accgcgccta cgtcatggag acaggccaga tcaccatgac cggcagcgga gcgcagcttc
     5761 tggccgatgc acgcgtgcgg gcaagctatc ttggcgcaaa aacaacaccg gagacggggg
     5821 ttgcgcgagg gcagtgagtg catcccgcgg gcgttgcttt cgccaacaac gctgttcgga
     5881 tatcgtcgcc cgctcgggta tgccgcttca cttcaccgga gaacgatcat gaccatgaac
     5941 cgacgca
//
LOCUS       DATCWM010000446         3831 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_95038, whole genome shotgun sequence.
ACCESSION   DATCWM010000446 DATCWM010000000
VERSION     DATCWM010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3831
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95038"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            153..1454
                     /gene="nuoF"
                     /locus_tag="VIQ50_08730"
     CDS             153..1454
                     /gene="nuoF"
                     /locus_tag="VIQ50_08730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008876526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HEY9360505.1"
                     /translation="MLKDKDRIFTNLYGQHDWGLAGARARGAWDGTKAILEKGRDGII
                     NEVKASGLRGRGGAGFPTGLKWSFMPKQSDGRPHYLVVNADESEPGTCKDREIMRHDP
                     HLLVEGCLIAGFAMGAHTCFIYIRGEFVRERERLQAAVDQAYDANLIGKNNVHGFPFD
                     IIVHHGAGAYICGEETALLESLEGKKGQPRLKPPFPANVGLYGSPTTVNNVESIAVVP
                     DIMRRGAHWFAGIGRPNNTGTKLFCISGHVERPCTVEDAMGVPLRELLDTHCGGVRGG
                     WSNLLAVIPGGSSMPLIPAHQCDHLLMDFDGAREFKSALGTAAVIVMDKSTDIVRAMA
                     RISYFYKHESCGQCTPCREGMGWMWRVLTRMAEGRAHKREIDMLMEVTTQIEGHTICA
                     FGDGAAWPVQGLLRHFRGEIERRIDEYSANPHPEPVRVAAE"
     gene            1470..1940
                     /locus_tag="VIQ50_08735"
     CDS             1470..1940
                     /locus_tag="VIQ50_08735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009462957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3291 domain-containing protein"
                     /protein_id="HEY9360506.1"
                     /translation="MSRHLAQLNIGRLRHDVGDPRMAEFVDNLALVNGLAERSPGFVW
                     RYRDDSGSAIDTRPFDGDPRMAINLSVWDSVEALERFVWQTVHKHFYGHRHQWFERMD
                     ERYFVMWWVPAGYQPTVQEAIERLRHFQQRGPSDHAFGWESVPAAKLWKAARCA"
     gene            1937..2068
                     /locus_tag="VIQ50_08740"
     CDS             1937..2068
                     /locus_tag="VIQ50_08740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360507.1"
                     /translation="MSDGLKTMILSNRFWRSVTWLVRLDMAVGIAIAVALLLWLMWH"
     gene            2070..>3831
                     /gene="nuoG"
                     /locus_tag="VIQ50_08745"
     CDS             2070..>3831
                     /gene="nuoG"
                     /locus_tag="VIQ50_08745"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_process: GO:0006120 - mitochondrial electron transport,
                     NADH to ubiquinone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoG"
                     /protein_id="HEY9360508.1"
                     /translation="MTKLVVDGKEIDVPPDYTLLQACEAAGAEIPRFCFHERLSIAGN
                     CRMCLVELKGSPKPVASCAWGVRDCRPGPHGEPPEVLTKTAMVRKAREGVMEFLLINH
                     PLDCPICDQGGECDLQDQAMAYGVDSSRFEENKRAVEDKYVGVLVKTIMNRCIHCTRC
                     VRFMTEVAGVPELGAIGRGEDTEITTYLEQAMTSELQGNVVDLCPVGALTSKPYAFAA
                     RPWELNKTESIDVMDALGCAIRVDTRGREVMRILPRVNDDVNEEWISDKTRHVVDGLR
                     TQRLDQPYIRENGRLHAASWRDAFEVIAAKVKQTQPRRMGAIVGDLAAVEEIFALKDL
                     MTRLDVVNLDCRQDGAMLDPTSGRASYLFNATIAGIEHADALLLVGSNPRREAAVLNA
                     RIRKRWRVGAFPIGLIGERADLTYPYDYLGAGPQTLADIASGANEFGARLRQVDRPLV
                     IVGMAALARPDGAAIAALAARAAQGTGKEGAWNGYSVLHTAAARVGALDLGFVPGPDG
                     RNATAMAASGALDLLFLLGADEIDVAPGAFVVYIGTHGDAGAHRADVILPGAAYPEKS
                     GIYVNTEGRVQVAARASFPPG"
BASE COUNT          674 a         1247 c         1265 g          645 t
ORIGIN      
        1 cctgccctct acgcccgcgg caacggcggc aggacgcaag acgcagcgtt gcgcgatgcc
       61 gaagccaaga agccgggcga gccggcgaat gtgcacgagg ctccggcgcc gaaacctccc
      121 gccgacgatg catcggcgaa aaggcagccc tgatgctcaa ggacaaggat cgcatcttca
      181 cgaacctcta cggccagcat gactgggggc ttgccggcgc ccgcgcgcgt ggcgcttggg
      241 atggcaccaa agcgatcctc gagaagggcc gcgatggcat tatcaacgaa gtcaaggcct
      301 ccggcctgcg cgggcgcggc ggcgctggct tccccaccgg cctcaagtgg tcgttcatgc
      361 cgaagcagtc cgatgggcgg ccgcactatc tcgtggtcaa cgccgacgag tcggagcccg
      421 gcacctgcaa ggatcgcgag atcatgcgcc acgacccgca tctgctggtc gaaggatgcc
      481 tgatcgccgg cttcgccatg ggggcgcata cctgcttcat ctatatccgc ggcgagttcg
      541 tgcgcgagcg tgagcgcctg caagcggcgg tggaccaggc ctacgacgcc aatctcatcg
      601 gcaagaacaa cgtccacggc tttcccttcg atatcatcgt gcaccacggc gccggcgcct
      661 atatctgcgg cgaggagacc gcgctgttgg aaagcctcga aggcaagaag ggtcagccac
      721 gcctgaaacc gccgttcccc gccaacgtcg gactctacgg ctctccaact accgtcaaca
      781 acgtcgaatc cattgccgtc gtgcccgaca tcatgcggcg gggcgcgcat tggtttgccg
      841 gcatcggccg gccgaacaac accggcacga agctgttctg catttccggc catgtcgagc
      901 ggccctgcac cgtcgaggac gcgatggggg tgccgttgcg cgaattgctc gatacccatt
      961 gcggtggcgt gcgcggcggc tggagcaatc tgctcgccgt cattcccggc ggctcgtcga
     1021 tgccgctgat cccggcgcat cagtgcgacc acctgctcat ggatttcgac ggcgcccgcg
     1081 agttcaagtc cgcgctcggc accgccgcgg tgatcgtgat ggacaaatcg accgacatcg
     1141 tccgcgccat ggcgcgcatc tcctatttct acaagcatga gagctgcggc cagtgcacgc
     1201 cctgccgcga gggaatgggc tggatgtggc gcgtgctcac ccgcatggcc gaaggtcgcg
     1261 cgcacaagcg cgagatcgac atgctgatgg aggtcacgac acagatcgag ggccacacca
     1321 tctgcgcgtt cggcgacggc gccgcttggc cagtgcaggg tctactccgt catttccggg
     1381 gcgagatcga gcgacgcatc gacgagtaca gcgccaaccc gcacccggag ccggtgcggg
     1441 tcgcggcgga gtgagaaagg ggtgaaacga tgagccgtca tcttgcccag ctcaacattg
     1501 ggcgcttgcg tcacgacgtc ggcgacccgc gcatggcgga gttcgtcgac aatcttgcgc
     1561 tcgtgaatgg cttggccgag cgcagcccag gatttgtctg gcgctaccgg gacgacagcg
     1621 gaagcgccat cgacactcgt ccattcgacg gcgatccgcg catggcgatc aatctctcgg
     1681 tatgggacag cgtcgaggcg ctggagcgct tcgtatggca gacggtgcat aaacacttct
     1741 atggccatcg ccatcaatgg ttcgagcgca tggacgagcg ttacttcgtc atgtggtggg
     1801 tgccggcggg atatcagccg acggtgcagg aggcgatcga gcggctgcgc cacttccagc
     1861 agcgtggacc aagcgaccat gcgtttggct gggagagcgt tcccgctgca aagttgtgga
     1921 aagcagcgcg ttgcgcatga gtgacggact gaagacgatg atcctatcca atcgcttctg
     1981 gcgaagcgtc acatggttgg tgcggctgga catggccgtc ggcatcgcca ttgccgtcgc
     2041 gttgctgctc tggctgatgt ggcactgaca tgaccaagct cgtcgtcgac ggcaaagaga
     2101 tcgacgtccc gccggactac acgctgctgc aggcctgtga ggccgcgggc gccgaaatcc
     2161 cgcgcttctg cttccacgaa cggctctcga ttgccggcaa ctgccgcatg tgcctggtcg
     2221 agctcaaggg ctcgcccaag ccggtcgcct cctgcgcgtg gggagtacgc gactgccggc
     2281 cggggccgca cggcgagccg cccgaggtcc tcaccaagac cgccatggtg cgcaaggcgc
     2341 gcgaaggcgt gatggaattt ctgctgatca accacccgct cgattgcccg atctgcgacc
     2401 agggcgggga atgcgatctg caggatcaag ccatggctta cggcgtcgat tccagccggt
     2461 tcgaggagaa caagcgcgcg gtcgaggaca agtatgtggg ggtcctcgtc aagaccatta
     2521 tgaaccgctg catccactgc acgcgctgcg tgcgtttcat gaccgaggtt gcgggcgtgc
     2581 cggagctcgg cgctattggc cgcggcgaag acacggagat cacgacttac ctggaacagg
     2641 cgatgacctc cgagctgcag ggcaacgtgg tcgatctgtg cccggtcggt gcgctgacct
     2701 ccaagcccta cgcgttcgcc gcgcgaccct gggagcttaa caagaccgag tctatcgacg
     2761 tcatggacgc cctcggctgc gccatccgcg tcgatacgcg cggacgcgaa gtcatgcgta
     2821 ttctcccgcg cgtcaacgac gacgtaaacg aggagtggat ttccgacaag accaggcacg
     2881 tggtcgacgg tttgcgcacg cagcgcctcg atcagccgta cattcgcgag aacgggcggc
     2941 tgcacgcggc ctcctggcgc gacgccttcg aggtcatcgc cgccaaggtc aagcagaccc
     3001 agcccaggcg catgggcgcc atcgtcggcg atcttgcggc ggtcgaggaa atctttgcgc
     3061 tcaaggattt gatgacgcgg ctcgacgtgg tcaacctcga ttgccgccag gacggcgcga
     3121 tgctcgatcc gacgtcgggg agggcgagct atctcttcaa cgccaccatt gccggaatcg
     3181 agcacgcgga cgccttgcta ctcgttggct cgaacccgcg acgcgaagca gccgtcctca
     3241 acgcgcgcat ccgcaagcgc tggcgcgtgg gcgcctttcc gatcgggttg atcggcgagc
     3301 gggccgatct cacctatcct tacgactatc tcggcgccgg gccgcagacg cttgcagata
     3361 tcgcttcggg cgcgaacgag ttcggcgcgc gcctgcggca ggtcgatcga cctctcgtca
     3421 tcgtcggcat ggcggcgctg gcgcggccgg atggcgcagc cattgccgcg ctcgcggcgc
     3481 gcgccgcgca aggcaccggc aaggaaggcg cctggaacgg ctattcggtc ctgcacaccg
     3541 cggcggcgcg ggtaggcgcg ctcgacctcg gtttcgtgcc cggtccggac ggccgcaacg
     3601 ccaccgcgat ggcagcgtcc ggcgcgctcg atcttctgtt cctgctcggc gccgatgaga
     3661 tcgatgtcgc gcccggggcg ttcgtggtct atatcggcac ccacggggac gccggcgcgc
     3721 atcgggccga tgtcatcctt cccggcgcgg cttacccgga aaaatccgga atctatgtca
     3781 acaccgaagg acgcgtgcag gtggctgccc gcgcttcgtt cccgccgggc g
//
LOCUS       DATCWM010000447         4217 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_510706, whole genome shotgun sequence.
ACCESSION   DATCWM010000447 DATCWM010000000
VERSION     DATCWM010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4217
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_510706"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            328..927
                     /locus_tag="VIQ50_08750"
     CDS             328..927
                     /locus_tag="VIQ50_08750"
                     /EC_number="2.7.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012752677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046316 - gluconokinase activity [Evidence
                     IEA];
                     GO_process: GO:0046177 - D-gluconate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HEY9360509.1"
                     /translation="MKTASPLPDPSVLVLMGVSGCGKSTIAMMLAHRLNWIFEEGDWF
                     HPPSNVEKMHSGVPLTDEDRWPWLHGIAAWIDATRRVGNHGTVACSALKRAYRDILIG
                     GRPDVRLVYLKGDRDLIARRLAARDAHFMPPALLDSQFASLEEPQPDEHAIVVSIVPH
                     PREIVEEIVKRLGKAAAPSAQGLAVTARRSSPEESGNVP"
     gene            938..2116
                     /locus_tag="VIQ50_08755"
     CDS             938..2116
                     /locus_tag="VIQ50_08755"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HEY9360510.1"
                     /translation="MAKKRIGILTGGGDVPGLNSVIKTVTYRSSENDIEVIGLRRGWE
                     ALTHLNVDDAESRRRYVMPLDRENTRIIDRRGGTVLHSSRTNPAKMTKLPDHLAGKDF
                     PLSQGKGGATNTWDLSEQVMANLSALNIDHLIAIGGDDTLSYAAKLNGLGVKIVAVPK
                     TMDNDVHNTEYCIGFSTAITRASDAIQRQRTTVASHERIGIFRVFGRDAGFTALYTAY
                     TTSVRCVVPEYKVNLDKLIRLLVEEKRANPSNYALVVLSEGAEWEGYRVQEYGEADAY
                     GHRKKASVAEALAEEIKRRTGEETLTSDLTYDLRSGDPDFVDKLVALTFGNMAYDAVL
                     DGKSGLMSALVKGCYDLVPIPDHNLGPRKLDIATMYNIERYRPMYASKRGLPVFLQRA
                     "
     gene            complement(2241..2918)
                     /locus_tag="VIQ50_08760"
     CDS             complement(2241..2918)
                     /locus_tag="VIQ50_08760"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEY9360511.1"
                     /translation="MSKTPDIVFLFDVDNTLIDNDRVQAHLSEHLEQTYGAVTRDRYW
                     EIFEQLRSELGYADYLGALERYRTEDLHRPEVLRMSSWLVDYPFVERLYPGALEAIKH
                     AQQWGTPVILSDGDAVFQPRKVERSGLWKAFDNRVLIYIHKEEELDDVQRLYPADHYV
                     LIDDKLRILAAVKKIWGERVTTVFPKQGHYALDPKTLAEYPPADIELGKIGDLVKYDL
                     AAFLKKK"
     gene            complement(2947..>4217)
                     /locus_tag="VIQ50_08765"
     CDS             complement(2947..>4217)
                     /locus_tag="VIQ50_08765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018044093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HEY9360512.1"
                     /translation="SPHKQDTAAAHGEPLGEEEVRLTKRDYGWPEDAKFLVPDAVRAH
                     FAAGIGARGAQARAHWNELFAAYRAKYPELATEIDLMQRRELPAGWERGLPVFPADAK
                     GIAGRDASGKVLNVLAQNIPWLLGGSADLGTSNKTLLTFEGAGDFEPGNRGGKNLHFG
                     IREHAMAAAVNGLALSKLRAFGATFFIFSDYARPAIRLSALMELPTIFVFTHDAMGDG
                     EDGPTHQPVEQLASFRAEPGLVVLRPGDANEVVEAYRYIMQLRHQPAVLALSRQPLPT
                     LDRSKYAPASGVARGAYVLADPPGGKPELILIATGSEVSLCVQAHEELLAEGIRSRVV
                     SMPSWDIFEHQTQAYQDSVLPPEVTARIAVEQASTFGWERYVGRAGRIIGMKTFGASA
                     PLKELLRKYGFEPQRVTAVAKELLGKDKKN"
BASE COUNT          768 a         1336 c         1330 g          783 t
ORIGIN      
        1 gcggcctgag cgcgtggagc gcttcgatag actgtcgttt tttgccgctt cgtcgcggcc
       61 gatgccgcgt ccgcggcgca caggagaatg gcagcgacga ggagagtcat cgccctgatt
      121 gatattttgg cctcctgtgg cgcgagcgcg agaaccgcgt ttgcgctatg ctgcctctgc
      181 cgagggagtt gctcttttat tacgggagat caacggcaag tcgcgcgctc gtgatcgggc
      241 gcctgcaaca cgtgaagata tgctgtgccc ggagtcggcc tttccggtcg cgcggcttgc
      301 gccagagaag gaggcctaga actgcaaatg aaaaccgcct cgccgttgcc ggatccttct
      361 gtccttgtgc tgatgggggt ctccggttgc ggcaagagca cgatcgcaat gatgctcgca
      421 catcggctga attggatctt cgaggagggc gactggttcc accccccgtc gaacgtcgag
      481 aagatgcaca gcggcgtgcc gctcaccgac gaggatcgct ggccctggct gcacggcatc
      541 gccgcctgga tcgatgcgac gcggcgcgtc gggaatcatg gcaccgtcgc ttgctcggcg
      601 ctcaagcgtg cctatcgcga tatcctgatc ggtggccgcc ccgatgtccg cctcgtctat
      661 ctcaagggcg atcgggacct gatcgcccgg cggctcgcgg cacgcgacgc gcatttcatg
      721 ccgcccgcgc tgctcgacag ccaatttgcg agcctcgagg agccgcagcc ggacgaacat
      781 gcaatcgtgg tctcgatcgt tccgcatccg cgcgagatcg tcgaggagat cgtcaagcgg
      841 ctgggcaagg ctgcagctcc atctgcgcag gggctggccg tcactgcccg acgctcgtct
      901 cccgaggagt ccgggaacgt gccgtagagg tgtcgtcatg gcaaaaaaac gaatcggcat
      961 tctcaccggc ggcggcgacg tcccgggtct caactcggtc ataaagaccg tcacctaccg
     1021 cagcagcgag aacgacatcg aagtcatcgg tctgcgtcgc ggttgggagg cgctgacgca
     1081 cctgaacgtc gacgatgcgg agagccgccg gcgctacgtt atgccgctcg atcgcgagaa
     1141 tacgcgcatc atcgaccggc gcggcggcac cgtgctgcac tcgagccgca ccaacccggc
     1201 aaaaatgacc aagctgcccg atcacctcgc cggcaaggat tttccgcttt cgcaaggcaa
     1261 ggggggcgcg accaacacct gggatctttc cgagcaagtg atggccaacc tgtcggcgct
     1321 caacatcgat catctgattg ccataggcgg cgatgatacg ctcagctacg ccgccaagct
     1381 caacgggctc ggggtcaaga tcgttgccgt cccgaagacg atggacaatg acgttcacaa
     1441 caccgagtac tgcatcggct tctccaccgc gatcacccgc gccagcgacg ccatccagcg
     1501 ccagcgcacc accgtcgcct cgcacgagcg catcggtatt ttccgcgtgt tcggacgtga
     1561 cgccggcttc actgcgctct atacggcgta caccacctcg gtccgctgcg tcgtccccga
     1621 atacaaggtc aatctcgaca agctcatccg cctgctggtc gaggagaaac gcgcaaaccc
     1681 gagcaactat gcgctcgttg tcctcagcga gggcgcggaa tgggagggtt accgcgtcca
     1741 ggaatacggc gaggccgatg catacggcca ccgcaagaag gcgagcgttg ccgaggcgct
     1801 tgccgaggag atcaagcggc gcaccggcga ggagaccctc acgtccgacc tcacctacga
     1861 tctgcgctca ggtgatccgg acttcgtcga caagctggtg gccttgacct tcggcaacat
     1921 ggcctacgat gccgtcctcg atggcaagag cggcctgatg tcggcgctgg tgaagggctg
     1981 ctacgacctc gtgccaatcc ctgatcacaa cctcgggccg cgcaagttgg atatcgccac
     2041 gatgtacaat atcgagcgat accgcccgat gtacgccagc aagcgcgggc tgcccgtgtt
     2101 tctgcagcgc gcgtaggggc gcgcgtcgaa gcggtgattt ccatcgacga agaggggatg
     2161 atcgcagaac atcccatcaa gcaaatcgat tagatcgacg ttaatttcaa acgtatggac
     2221 acgcgcgttg cggtctgtac ctacttcttc ttgaggaacg cggcgagatc gtacttcacg
     2281 agatcgccga tcttgccaag ctcgatatcc gcgggcggat attcggccag agttttgggg
     2341 tcgagcgcat agtgcccttg cttgggaaat acggtcgtca cgcgttcgcc ccagattttc
     2401 tttaccgcgg ccaggatgcg caatttatcg tcgatcagga cgtaatggtc ggcagggtag
     2461 agacgctgta cgtcgtcgag ttcctcctcc ttatggatgt agatgaggac gcggttgtcg
     2521 aaggctttcc acaggcccga tcgttccacc ttgcgcggtt ggaacacggc atcgccgtcg
     2581 gacaggatga ccggggttcc ccactgctgc gcgtgcttga tcgcttccag agcgccagga
     2641 taaagccgct cgacgaaagg gtagtcgacc agccagctcg acatgcgcag cacctccgga
     2701 cgatgcaagt cctcggttcg gtagcgctcc aacgcgccga ggtaatcggc atatccgagt
     2761 tcgctcctca gctgttcaaa gatctcccag tatcggtcgc gcgtcaccgc gccataggtc
     2821 tgctcgaggt gctcgctcag atgggcctgc acgcgatcat tgtcgatcaa cgtgttgtcc
     2881 acgtcgaaca ggaagacgat gtcgggcgtc ttgctcattt cgttcacgct ggtttcgcgc
     2941 gacctttcag ttcttcttgt ccttgccgag cagttccttg gcgaccgcgg tcacacgctg
     3001 cggttcgaag ccgtattttc gcaacagctc cttgagcggg gccgaggcgc cgaaggtctt
     3061 catgccgatg atgcggcctg cgcggccgac gtagcgttcc cagccgaagg tcgaggcctg
     3121 ctccaccgcg atccgcgcgg tcacctccgg cggcagcacg ctgtcctgat acgcctgcgt
     3181 ctgatgctcg aaaatgtccc aggacggcat cgagaccacg cgcgagcgga tcccctcggc
     3241 gagaagctcc tcatgcgcct gcacgcacaa actgacctcg ctgcccgtgg cgatgaggat
     3301 cagctcgggt tttcctcccg gcggatcggc aagcacatag gcgccgcggg cgacgccgga
     3361 cgcgggcgcg tacttgctgc gatccaacgt gggtagaggt tgccgcgaca acgccagcac
     3421 cgccggctgg tgccgtagct gcatgatgta acgataggcc tcgacgacct cgttggcgtc
     3481 tcctggccgt agcaccacca agcccggttc ggcgcggaag gacgccagtt gttccaccgg
     3541 ctgatgcgtt ggaccgtcct cgccgtcacc catggcatcg tgggtgaata cgaagatggt
     3601 gggcagttcc atcagcgccg agagccgaat ggcagggcgc gcatagtcgc tgaagatgaa
     3661 gaaggtggcg ccgaaggcgc gcagcttgga caatgcgagc ccattgaccg cggcggccat
     3721 cgcgtgctcg cggatgccga aatgcaggtt cttgccgccg cgattgccgg gctcgaagtc
     3781 gcccgcgcct tcgaatgtga gcagcgtctt gttggaggtg ccgaggtcgg ccgagccgcc
     3841 cagcagccaa gggatgttct gggcgagcac attgagcacc ttgcccgacg cgtcgcgtcc
     3901 ggcgatgccc ttggcgtcgg cgggaaacac gggaagcccg cgctcccatc ctgccggcag
     3961 ctcacgccgc tgcatcaggt cgatctcggt cgcaagttcg ggatatttcg cgcgataagc
     4021 ggcaaacagt tcgttccaat gggcgcgcgc ctgcgcgccg cgggcgccga tgccggcggc
     4081 gaagtgggca cgcaccgcgt caggcaccag gaacttggcg tcctcgggcc atccgtaatc
     4141 gcgcttggtg agacgcacct cttcctcgcc cagcggctcg ccgtgcgcgg cagcggtgtc
     4201 ctgcttgtgc ggcgagc
//
LOCUS       DATCWM010000448         3556 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_521506, whole genome shotgun sequence.
ACCESSION   DATCWM010000448 DATCWM010000000
VERSION     DATCWM010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3556
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_521506"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..479
                     /locus_tag="VIQ50_08770"
     CDS             <1..479
                     /locus_tag="VIQ50_08770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9360513.1"
                     /translation="TGFYLIDSLIAGEGEVFTASLKQLVLPALTLGIFALAPIARMTR
                     ASMLAVLASDFVRTARASGLAPLTVVVTYAFRNAMLPVVTTLGMVFSFLLGANVLVEK
                     VFAWPGIGSFAVEALIASDFAPLQGFVLTMAVMYVALNLLIDVLYGVIDPRVRIEA"
     gene            476..1453
                     /locus_tag="VIQ50_08775"
     CDS             476..1453
                     /locus_tag="VIQ50_08775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9360514.1"
                     /translation="MNKAASFPSPSQQGGAEQTVAVAPLRPASAGGASAPALAPRNTG
                     FSATLRHARYILGENAVTGFAFALFLVIVLAALLGPYLVPYDPLASDTAAALKAPSVA
                     HWFGTDQLGRDVFSRVVVATRLDFLIAVASVALVFLMGGLAGVAAGFFGGWTDRIVGR
                     VADTIMAFPLFVLAMGIVAALGNTVENVVLATAIVNFPLYARIARAEANVRREAGFVL
                     AARLSGNGEMRILLAQVLPNIMPIMVVQMSLTMGYAILNAAGLSFIGLGVRPPTAEWG
                     IMVAEGAAFMVSGEWWIAFFPGAALMVAVFCFNLLGDGLRDIVDPQRRT"
     gene            1464..3206
                     /locus_tag="VIQ50_08780"
     CDS             1464..3206
                     /locus_tag="VIQ50_08780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016841549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9360515.1"
                     /translation="MSETVPLLEVADLTVEFSTRRGVVRAVEHVDVRVAKGETVGIVG
                     ESGSGKSVTSYAVMRILDRAGRIAQGAVRFTGLDVRAASENEMRDLRGREMSMIFQNP
                     RAALNPIRKIGRQIEDVLEQHSQADSAALTDRAIEMLDQVRIARPRERYHAYPFELSG
                     GMCQRVVIALALACRPQLLIADEPTTGLDVTTQKTVMDLIVELTRQRGMSTILITHDL
                     GLAATYCDRVVVMEKGRVVESAPSRDIFTAPAHPYTRKLMRATPRPGVSLRDLLLEDE
                     LELRIPQRQTRSAPCPQGESAAPSHINDRAPLLVVEKLVKEYARKRTGGPLAKIFARQ
                     PTPEPDTFRAVDGISFTVARGESVGLVGESGCGKSTTSTMVMRLIDKSDGVIMFDGED
                     IGAIPAKSFAKLPLRKRIQMVFQDPTDSLNPRFTAARAIADPILRLGGTRGRDVRARC
                     EALARQVGLPLDLLDRFPHQLSGGQKARVGIARAIALHPELIILDEPTAALDVSVQAV
                     VLNLLQELKETLGMSYLFVSHDLNVVRLLCDRVIVMRAGRIVEQGPTAQILVSPQAQY
                     TRDLLAAVPHPTFA"
     gene            3335..3544
                     /locus_tag="VIQ50_08785"
     CDS             3335..3544
                     /locus_tag="VIQ50_08785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4089 domain-containing protein"
                     /protein_id="HEY9360516.1"
                     /translation="MRAKRGRKAAQRNSLDNLVDAAARALDLSIAPAWRGAVKANLAV
                     SFALAELFADFPLPDDAEPAPVFSA"
BASE COUNT          527 a         1214 c         1164 g          651 t
ORIGIN      
        1 taaccggctt ctatctgatc gacagcttga tcgcaggcga gggcgaagtg ttcaccgcga
       61 gcctcaagca actcgtgctg ccggcgctca cgctcggaat tttcgcgctt gcgccgatcg
      121 cgcgcatgac gcgcgcatcg atgctcgcgg tgttggcgtc ggatttcgtg cgcaccgccc
      181 gcgcgagcgg gcttgcgccg ttgaccgtgg tcgtcaccta cgcgttccgc aacgccatgc
      241 tgccggtcgt caccacgctc ggcatggtgt tctccttcct gctcggcgcc aacgtgctgg
      301 tcgagaaggt cttcgcctgg ccgggcatcg gctcgttcgc ggtcgaggcg ctgatcgcgt
      361 cggacttcgc gccgctgcag ggtttcgtcc tcacgatggc ggtgatgtat gtcgcgctca
      421 atctcttgat cgatgtgctc tacggcgtga tcgatccgcg cgtgaggatc gaggcatgaa
      481 caaagcggcg tctttcccca gcccctccca acaaggggga gcggagcaga ccgtcgccgt
      541 ggcgccactg cgccccgctt ccgccggtgg cgcgagcgcg ccagccctcg cgcctcgcaa
      601 caccggcttc tccgccacgc tccggcacgc ccgctacatc ctgggcgaga acgcggtgac
      661 cggctttgcc tttgcgctct ttctcgtcat cgtgctcgcg gccttgctcg gtccttatct
      721 cgtcccttac gacccgttgg cgagcgatac cgcggcggcg ctcaaggcgc cctcggtcgc
      781 gcactggttc ggtaccgacc agctcggccg cgacgtgttc agccgagtcg tggtggcgac
      841 gcggctcgat tttctcatcg ccgtcgcctc ggtcgcgctc gtcttcctga tgggtgggct
      901 cgccggcgtg gctgccggat tcttcggcgg ctggaccgac cgcatcgtcg gccgcgtcgc
      961 cgacaccatc atggcttttc cgctgttcgt cctggccatg ggcatcgtcg ccgcgctcgg
     1021 caataccgtg gagaacgtgg tgctggcgac tgcgatcgtg aatttcccgc tctatgcgcg
     1081 catcgcccgc gctgaagcca atgtccgccg cgaggccggc ttcgtgctgg cggcgcggct
     1141 ctccggcaac ggcgagatgc gcatcctgct cgctcaggtg ctgccgaaca tcatgcccat
     1201 catggtcgtg cagatgtcgc ttaccatggg ctacgccatc ctcaacgccg ccgggctctc
     1261 cttcatcggg ctgggcgtgc gcccgccgac ggcggaatgg ggaatcatgg tggcggaagg
     1321 cgccgccttc atggtttctg gcgagtggtg gatcgcgttc tttcccggcg ctgcgctgat
     1381 ggtcgcggtg ttctgcttca atctgctcgg cgatgggctg cgcgacatcg tcgatccgca
     1441 acggcgaacc tgagtttggt gtcgtgagcg agaccgtgcc gctgctcgag gttgccgacc
     1501 tcaccgtaga gttctcgacc cgacgcggcg tagtgcgggc ggtggagcac gtcgacgtgc
     1561 gcgtcgccaa gggcgaaacc gtcggcatcg tcggcgagtc cggttccggc aaatcggtca
     1621 cctcctacgc agtgatgcgc atcctcgatc gggccggccg catcgctcag ggcgcggtgc
     1681 gcttcaccgg gctcgacgtg cgcgccgcca gcgagaacga gatgcgcgat ctgcgcgggc
     1741 gcgaaatgtc gatgatcttt caaaacccgc gcgcggcctt gaacccgatc cgcaagatcg
     1801 gacgccagat cgaggatgtg ctggaacagc attcgcaggc cgattccgcg gcgctgaccg
     1861 atcgcgcgat cgagatgctg gaccaggtgc ggatcgcgcg tccgcgcgag cgctaccatg
     1921 cctatccctt cgagctctcc ggcggcatgt gccagcgcgt ggtgatcgcg ctcgcgctcg
     1981 cctgccggcc gcagctgctc atcgccgacg agccgacgac cggcctcgac gtgaccacgc
     2041 agaagacggt gatggacctc atcgtggaac tcactcgcca gcgcggcatg tcgaccatcc
     2101 tgatcaccca cgacctcggc ttggccgcca cttattgcga ccgcgtggtg gtgatggaga
     2161 agggccgcgt ggtggagagc gcgccgtcgc gtgacatttt caccgctccc gcgcatccct
     2221 atacgcgcaa gctcatgcgc gcgacgccgc gtcccggcgt gtcgctacgc gacctcttgc
     2281 tggaggatga gcttgagttg aggatacctc agcggcaaac tcggtctgct ccctgcccgc
     2341 aaggggagtc tgcggcaccg tcgcacatta acgacagagc gccgctgctc gtggtggaga
     2401 agctggtcaa ggaatatgcg cgcaagcgca cgggcgggcc gttggcaaaa atctttgcgc
     2461 gccagccgac gcctgagccc gacaccttcc gcgcggtcga cggcatcagc tttaccgtcg
     2521 cgcgcggcga gagcgtcggc ctggtcggag agtccggttg cggcaagtcg acgacctcca
     2581 ccatggtgat gcggctcatc gacaagagcg atggcgtcat catgttcgac ggcgaggaca
     2641 tcggcgcgat ccccgccaaa tccttcgcca agttgccgct gcgcaagcgc atccagatgg
     2701 tgttccaaga tccgaccgat agcctcaatc cgcgcttcac cgccgcgcgc gccattgccg
     2761 atccgatcct gcggctgggc gggacgcgcg gacgcgacgt gcgcgcgcgc tgcgaggcgc
     2821 tggcgcggca ggtcggcctg ccgctcgatt tgctcgaccg tttcccgcat caactctcgg
     2881 gcgggcagaa ggcgcgcgtc ggcatcgcgc gcgcgatcgc gctgcatccg gagctgatca
     2941 tcctcgacga gccgaccgcg gcgctcgacg tctcggtgca ggcggtcgtg ctcaatcttc
     3001 tgcaggagct caaggagaca ctgggcatga gctacctgtt cgtctcacac gatctcaacg
     3061 tggtgcggct cttgtgcgac cgcgtcatcg tcatgcgcgc gggccgtatc gtcgagcagg
     3121 ggccgaccgc gcagattctc gtctcgccgc aggcgcaata cacccgcgat ctcctggccg
     3181 ccgtccccca tccaaccttc gcgtgacgga tgtagtacga tgccggctgc cgatgaccag
     3241 aacggggagc gggacacaaa tggccaaacg agccaaatcg accaaaagca aagtcggggc
     3301 gccgcgcgcg cgagcgaagc cgcgggtcgc tgcgatgcgg gccaagcgtg gccgcaaggc
     3361 tgcgcaacgc aattcactcg acaatcttgt cgacgccgcc gcgcgcgcgc ttgatctttc
     3421 catcgcgccc gcctggaggg gcgcggtcaa ggccaacctc gcggtgagct tcgccctcgc
     3481 cgagctgttc gcggacttcc cgttgccgga cgacgcggag cccgcgccgg tcttttccgc
     3541 ctaggccccg gcgatg
//
LOCUS       DATCWM010000449         3017 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_68131, whole genome shotgun sequence.
ACCESSION   DATCWM010000449 DATCWM010000000
VERSION     DATCWM010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3017
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68131"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1109
                     /gene="pdhA"
                     /locus_tag="VIQ50_08790"
     CDS             <1..1109
                     /gene="pdhA"
                     /locus_tag="VIQ50_08790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015929958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045250 - cytosolic pyruvate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HEY9360517.1"
                     /translation="GVGNMTERWHPDERLPVIARFEVRRRAYLAPDGSINRQLPAFAS
                     DTRLLVRLYRAMVLVRAFDMKAVALQRTGRLGTYAASLGQEAVSVGTASAMRNEDVLL
                     PSYRDNAALIWRGVKLEEILLFWGGDERGNCFSGPVQDFPFCIPVGSQAPHAAGVAYA
                     FKARKEPRVAVCLFGDGATSKGDLWEAMNFAGVHKLPVVFVATNNQWAISVPLRLQTA
                     SETLAQKAIAAGFIGEQVDGNDVVAMHAAAKDAIEAARNDQGPRFIEAVTYRLGDHTT
                     ADDAARYRSTTEVQARWKEEPIARLRSFLAGQKVWSKTDEEQLSAECQQHIDAAVERY
                     LVVKPRAPETMFDHLYAELPRAYAAQRRELEEND"
     gene            1109..2089
                     /locus_tag="VIQ50_08795"
     CDS             1109..2089
                     /locus_tag="VIQ50_08795"
                     /EC_number="1.2.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HEY9360518.1"
                     /translation="MPEVTLVEAINLALARAMEDDPNVVVFGEDVGVNGGVFRATVGL
                     QQRFGSERVFDTPLAELLISGLCVGMAAQGLKPVGEIQFMGFIYPCIDQLVNHASRLR
                     NRTQGRLSCPMVLRSPYGSGIRAPEHHSESTEAMLAHIPGLRVVIPSSPERAYGLLLA
                     AIRDPDPVVFLEPTRIYRAAKGEVEDNGEALPLDVAFVLREGRDVTLISWGAMVKETL
                     AAAETLDAEGISAEVIDLATLKPYDEDTLLGSVAKTGRCVIVHEAARTGGFGAEIAAL
                     IAERGLTSLLAPLARVTGYDTVMPLPRLEQHYMPSVGRIATAGRKACRFS"
     gene            2109..>3017
                     /locus_tag="VIQ50_08800"
     CDS             2109..>3017
                     /locus_tag="VIQ50_08800"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoamide acetyltransferase family
                     protein"
                     /protein_id="HEY9360519.1"
                     /translation="MRQFMLPDLGEGLEEAEIVTWHVNEGDHVVTDQPLVSVETDKAV
                     VEVPSPWSGRIARVFGTKGDLVKVGAPLVEFAEGAEQDTGTVVGQLDTSEKQAAVAER
                     SAEPAPARMLQALPAVRALAHKLDVDLNAVQATGPGGTITRADVERAAKSLAEAGPAE
                     ALRGMRRAMALRMAAAHAEVVPATVVDDADIDEWRTGEDPSVRLIRAIAAACRAEPAL
                     NAWYNSGAGARRLVKRIDIGIAIDTEGGLIVPVMRNVAERDARDLRAGLDRLRADAAA
                     RSIPPEELRGATITLSNFGMIGGRFAS"
BASE COUNT          544 a          954 c          984 g          535 t
ORIGIN      
        1 cgggagtcgg taacatgacc gaaagatggc acccagacga gcggctgccg gtgatcgcgc
       61 gcttcgaggt gcgccgccgc gcctatctcg cccccgacgg ctcgatcaat cggcaactcc
      121 cggccttcgc ctccgatacc cgcctgctcg tccgtctcta tcgggcgatg gtgctggtgc
      181 gcgccttcga tatgaaagcg gtggcattgc agcgcaccgg ccgactcggg acctatgccg
      241 catcgctcgg ccaggaggcg gtgtcggttg gcacggccag cgccatgcgt aacgaggacg
      301 ttttgctccc ttcctatcgc gacaatgccg ccttgatctg gcgtggggtc aaactggaag
      361 agatcttgct gttttggggc ggcgacgagc ggggcaattg cttctccggg ccagttcagg
      421 attttccgtt ttgcattccg gtcggatcgc aggcccccca cgctgcgggc gtcgcctacg
      481 ccttcaaggc gcgaaaggag ccgcgcgttg ccgtatgtct gttcggcgac ggcgccacct
      541 cgaagggcga cctctgggag gcgatgaact tcgcaggtgt gcacaagctg ccggttgtgt
      601 tcgtcgccac caataatcag tgggctattt ccgtaccgct gcggctccag accgcatccg
      661 aaacgctggc gcagaaagcg atcgctgcgg gcttcatcgg cgagcaggta gatggcaacg
      721 acgtcgtggc catgcacgcg gcggccaaag acgcgatcga agccgcccgc aacgaccagg
      781 ggccccgctt tatcgaggcg gtcacctacc ggctcggcga tcatacgacc gcagacgacg
      841 cagcgcgcta ccgttcgacc acggaggtcc aggcgcgctg gaaggaggag ccgatcgcgc
      901 ggttgagatc atttctggct ggccagaagg tgtggagcaa gacggacgaa gagcagcttt
      961 ccgccgagtg ccagcagcac atcgacgccg cggtcgagcg ctatttagtc gtaaaaccgc
     1021 gggcccccga gaccatgttc gatcaccttt atgccgaact gccgagggcc tatgccgcgc
     1081 agcgccggga actcgaggag aacgactgat gcctgaggtg acactggtgg aagccatcaa
     1141 tttggccctc gcccgcgcga tggaggacga ccccaatgtg gtcgtgttcg gcgaggatgt
     1201 cggagtcaac ggcggtgtct tccgcgcgac ggtcggattg cagcagcgct tcggatcgga
     1261 acgcgtgttc gatacgccgc ttgccgaact cctcatcagc ggactctgcg tcggcatggc
     1321 cgcgcaaggg ctgaagccgg tcggcgagat ccagttcatg ggattcattt atccctgcat
     1381 cgatcaattg gtgaaccatg cctcgcggct gcgcaaccgc acacaagggc ggctcagctg
     1441 tccgatggtt ttacgctccc cgtatggtag cggcattcgc gctcccgaac atcactccga
     1501 gagcaccgag gccatgctcg cccatattcc aggtctgcgc gtggtcattc catcttcgcc
     1561 cgaacgcgct tacggcctgc tgctcgccgc catccgcgac cccgatccgg tggtgttcct
     1621 ggagccgaca cgcatctacc gcgcagcgaa aggcgaggtg gaagacaacg gcgaggccct
     1681 gccactggat gtcgcctttg tcctcaggga aggccgcgac gtcacgctga tcagctgggg
     1741 cgcgatggtg aaagaaacac tggcggctgc cgaaacgctc gacgccgaag gcatcagtgc
     1801 agaagtcatc gaccttgcaa ccctcaagcc gtatgacgaa gatactctgc tcggctcggt
     1861 ggcaaagacc ggacgctgcg tcatcgtgca cgaagctgca cggaccggcg gcttcggtgc
     1921 cgagatcgcc gcgcttatcg ccgagcgcgg gctgacgtct cttctcgctc ctctcgcccg
     1981 cgtcacaggc tatgatacgg tgatgccgct gccccggctt gagcagcatt atatgccgtc
     2041 ggtcggccgt atcgcgaccg ccggacgcaa ggcttgccgg ttcagttgag atcagcggaa
     2101 cacatcccat gcggcagttc atgttgcccg atcttggcga aggtctcgaa gaggccgaga
     2161 tcgtgacttg gcatgtgaac gagggggatc acgtggttac ggatcagccg cttgtctcgg
     2221 ttgagaccga caaggccgtg gttgaagtgc cgtcaccttg gagtggccgc atcgcgcggg
     2281 tgttcgggac caaaggtgat ctggtgaaag ttggtgctcc gctggtcgag tttgccgagg
     2341 gcgctgagca ggatactggc accgtggtcg gccagctcga caccagcgag aagcaagctg
     2401 cagtagccga aagatctgcc gaacctgcac ctgcgcggat gcttcaggcc cttccggcgg
     2461 tacgcgccct cgcacacaag ctcgacgtcg atctcaacgc agtacaggcc accggacccg
     2521 gcggcaccat cacacgggcc gacgtcgagc gagccgccaa aagtctcgcc gaggcaggtc
     2581 cggccgaggc attgcgcggg atgcggcgcg ccatggccct gcgcatggca gcggcgcatg
     2641 ccgaagtcgt ccccgctact gtcgtcgacg acgctgatat cgacgagtgg cgaacgggcg
     2701 aagacccaag tgtccgcctg atacgcgcga ttgcggctgc ctgcagggcc gagcccgctc
     2761 tcaacgcctg gtacaattcc ggcgcgggcg cgcggcgcct ggtcaagcgc atcgatattg
     2821 gtatcgcgat cgataccgag ggcggcctga tcgtgccggt catgcgcaat gtcgccgagc
     2881 gcgacgcaag ggatctgcga gccggcctcg acaggttgcg agccgacgcg gccgcgcgct
     2941 caattccgcc ggaagaactc cggggtgcga ccatcacgct gtcgaacttc ggcatgatcg
     3001 gcggtcgctt cgccagt
//
LOCUS       DATCWM010000450         3252 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_440667, whole genome shotgun sequence.
ACCESSION   DATCWM010000450 DATCWM010000000
VERSION     DATCWM010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3252
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_440667"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..213)
                     /locus_tag="VIQ50_08805"
     CDS             complement(<1..213)
                     /locus_tag="VIQ50_08805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9360520.1"
                     /translation="MRGLLNHRLFPALAISAVVVLLPLVLPSAYYYRVAALVFVFALA
                     AVGLNLLMGFAGQVSLGHAGFMGIGAY"
     gene            complement(315..1187)
                     /locus_tag="VIQ50_08810"
     CDS             complement(315..1187)
                     /locus_tag="VIQ50_08810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9360521.1"
                     /translation="MSELLQFVFSGLTVGAVYALVALGFTLIYNSCDVINFAQGEFVM
                     LGGMTTVFLGLAGVPLPLAACLAVVVTIAVGLALHRFAIEPARGSGAVVLIIITIGAS
                     IFLRGAAQVVFDKRFHSLPPFVGGDAIRIAGASILPQSLVVLAGAVIILVLLWSFIER
                     SLIGKATVATAANELAARLVGIDTRATVGLSFAISAAIGAVAGILITPIALTSYDIGT
                     LLALKGFAAAMLGGIGSAVGAVVGGLLLGLLEAFSAGYVSSQYKDAVGFLVILIVLLA
                     MPRGLFGRAPVERV"
     gene            complement(1192..2334)
                     /locus_tag="VIQ50_08815"
     CDS             complement(1192..2334)
                     /locus_tag="VIQ50_08815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018697668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9360522.1"
                     /translation="MLAYAKTGALIALLLAIGAGEARAQVRLGAVLSVTGPASFLGDP
                     EKKTLEMYVDNINAKGGVNGQKLQLVVYDDGADANAARTFATRLVEEDKVVAMVGGTT
                     TGATLAMIPVFEEAQIPLISLAGAIQIVEPVRKWVFKTPHTDKMACQKIFADLKQRNL
                     TTIALISGTDAFGKSMRDQCVAVAPQAGISIAHEESYGPRDSDMTPQLTNIKGKPGVQ
                     AVVNPGFGQGPAIVTRNYRQLGITLPLYQSHGVASKQFIDLAGPAADGVRLPAAALLV
                     AEKLPGNDPQKPVVVSYTDNYQQKTGQPVSTFGGHAYDGLMVFVEAAKRAGSFEQAKV
                     RDEIEKTKNFIGTGGIVNMSPNDHLGLDLSAFRMLEIKGGDWTLVQ"
     gene            2810..3166
                     /locus_tag="VIQ50_08820"
     CDS             2810..3166
                     /locus_tag="VIQ50_08820"
                     /inference="COORDINATES: protein motif:HMM:NF017088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HEY9360523.1"
                     /translation="MVLDDQEVSTILGKSVRSSADEDMGRIVDIIVSRDGQARAAVID
                     FGGFLGIGMRKIAVDWRALNFAPAGKPAGTITVDLTRNQVRLAPEYKRGEPVVVVSSA
                     SPERTAPSSEAAAPER"
BASE COUNT          631 a         1047 c         1065 g          509 t
ORIGIN      
        1 gtaggcgccg atgcccataa agccggcgtg gcccaggctg acctgtccgg cgaaacccat
       61 caacagattg agcccgacgg cggcaagggc gaacacgaac accagcgccg cgacgcgata
      121 ataataggcg gacgggagaa cgagcggcag caggacgacg accgcggaaa tagcaagcgc
      181 gggaaaaagg cgatgattca ggagccctcg catgaagctc tcgacgctct gtcgacccct
      241 tccccggctt ttgatgcagc acgtggacgc caacggacgc agtgcgagcc gacgcagcac
      301 cggctcaaca cagatcacac ccgctcaacc ggcgctcggc cgaacaaccc gcgcggcatc
      361 gcaagcagga cgatcaaaat gacgaggaac ccgaccgcgt ccttgtactg cgaggagacg
      421 tagccggcgg aaaatgcctc gagcagcccg agcagcaatc cgccgactac cgcgccgacg
      481 gcgctgccga taccgccaag catggcggcg gcgaagccct tgagcgccaa caacgttcca
      541 atgtcgtagc tcgtcaaggc gatgggagtg atcaggattc ccgccaccgc gccaatcgcg
      601 gcggagatcg caaaggacag gcccacggtg gcgcgcgtat cgatgccgac gaggcgcgcc
      661 gcgagttcat tcgccgcggt ggcgaccgtc gctttgccga tcaagctgcg ctcgatgaag
      721 ctccacagca gcacgaggat tatgacggcg ccggcgagca ccaccaggct ttgcggcagg
      781 atagacgcgc cggcgatgcg gatcgcatcg ccgccgacaa acggcggcag gctgtggaag
      841 cgcttgtcga ataccacttg cgcggcgccg cgaagaaaga tcgaggcgcc gatggtgatg
      901 atgatgagca cgacagcgcc actgccgcgc gccggctcga tggcgaagcg gtgaagcgca
      961 agtccgaccg caatggtgac gacaaccgca agacacgccg ccagcggcag cggcacgccg
     1021 gcaaggccga gaaacaccgt ggtcattccg cccagcatca cgaattcgcc ctgagcgaag
     1081 ttgatcacgt cgcaggagtt gtagatcagc gtgaagccga gcgcgacgag cgcgtagact
     1141 gcgccgacgg tcaggccgga gaaaacgaat tggagcagtt cggacacgcg gctactgcac
     1201 cagcgtccag tcgccgccct tgatctcgag catacgaaag gccgagagat cgagccccag
     1261 atgatcattg ggcgacatgt tgacgatgcc gccggtgccg atgaagttct tcgtcttctc
     1321 gatttcgtcg cgcaccttgg cctgctcgaa gctaccggcg cgtttcgccg cttccacgaa
     1381 aaccatcagg ccgtcatacg cgtgaccgcc gaaggtggag acaggctggc cggtcttctg
     1441 ctgataattg tccgtgtagg aaacgacgac gggcttctgc gggtcattgc cggggagctt
     1501 ttccgccacg agcagcgccg cggccggcag ccgcaccccg tccgcggcgg gaccggcgag
     1561 atcgatgaac tgcttcgaag ccacgccgtg gctctgatag agcggcagcg taattcccag
     1621 ctgccggtaa ttgcgggtga cgattgccgg gccttggccg aagcccggat tgaccaccgc
     1681 ctgcacgccc ggtttgccct tgatgttggt gagctgcgga gtcatgtcgc tgtcgcgcgg
     1741 cccgtaggat tcctcgtgcg cgatgctgat gccggcctgc ggcgcaacgg ccacgcattg
     1801 gtcacgcatg gatttgccga aggcgtccgt ccccgagatc agcgcgatgg tcgtcaaatt
     1861 gcgctgcttc agatcggcga agattttctg gcaggccatc ttgtctgtgt gcggcgtctt
     1921 gaacacccat ttgcgcacgg gttcgacgat ctgaatggcg ccggcgagcg agatcaacgg
     1981 gatctgcgcc tcctcgaata ccggaatcat ggcgagcgtt gcgccggtgg tggtgccgcc
     2041 gaccatcgcc acgaccttgt cttcctcgac gaggcgggtc gcgaaagtgc gcgccgcatt
     2101 ggcgtcggcg ccgtcgtcgt agacgacgag ctgcagcttt tggccgttca cgccgccctt
     2161 ggcattgatg ttgtcgacgt acatctcgag cgtcttcttt tccggatcgc cgaggaacga
     2221 agccggaccg gtaacggaca gcacggcgcc aagcctgact tgggcgcgag cctcccccgc
     2281 cccaatcgcg agcaaaagcg cgatgagagc gcccgtcttt gcgtatgcca gcatgaatcc
     2341 ctctcctcgt gcactcggcg ttcttttgcg gccgagcgta acatggtttg cctcagccgt
     2401 ggcagtaccc gtaaccgcag acacagtggg tgctcggata ggcggtacca agggcgatcc
     2461 agctgccgaa gcgtggggcg cagaaatgct tgttgcagcc atggcgggcg aggaacccgg
     2521 acggcgcatt cgcgttgatg ttgcgggttg acgtgcatgg ggcagtgcag caatgcgcac
     2581 gggtctagcc atcatcgcca tcgtcgcgat cgctccgatc acggcggccg gtatctatgg
     2641 cggcaattcc agccgcgccc aggacgcagg gcggtcagct caggctcgcc aagtcgcgga
     2701 aacgcccgag ccgtcatcgt cgccgagcgg gcactccgcg gagaatccgc ccccgaccgc
     2761 tgcgccgccg gccgccgcgc ctccaaatcc ttctcccggc acgccggcaa tggtgctcga
     2821 cgaccaggag gtgtccacaa tcctcggcaa gagcgtacgc agcagcgcgg atgaagacat
     2881 ggggcggatc gtcgacatca tcgtcagccg cgacgggcag gcgcgtgcgg ccgtcatcga
     2941 cttcggcggc tttctcggca ttgggatgcg caaaatcgcg gtcgattggc gcgccttgaa
     3001 tttcgcacct gccggtaagc ccgccggcac gatcacggta gacctgactc gcaatcaggt
     3061 gcgcctcgcc ccggaataca aacgcgggga gccggtagtg gtggtcagct cggcgagccc
     3121 agagcgaacg gcgccgtcga gcgaggctgc agcaccggag aggtaaccct gtcaggcgca
     3181 cccgcacccc gccgtttccg ccaaggcgag cgacggatcg gaggcgatca ggcgccgccg
     3241 gccccgccgc gg
//
LOCUS       DATCWM010000451         4608 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_186859, whole genome shotgun sequence.
ACCESSION   DATCWM010000451 DATCWM010000000
VERSION     DATCWM010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4608
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186859"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..365)
                     /locus_tag="VIQ50_08825"
     CDS             complement(<1..365)
                     /locus_tag="VIQ50_08825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HEY9360524.1"
                     /translation="MPGFVHLHVHSSYSLLEGALPIARLCELAKSDRQPALALTDTDN
                     MFGALEFSDKMAAAGIQPIVGCALAVDFGDQEAFPRTGGGAQFDRPRIVLLAARESGY
                     RSLMRLASRAFLETAPNEPP"
     gene            complement(525..668)
                     /locus_tag="VIQ50_08830"
     CDS             complement(525..668)
                     /locus_tag="VIQ50_08830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360525.1"
                     /translation="MNYVHLSFRGWELGVMVRAVVEEAATLASLALFLGMVAIWAQVI
                     AAL"
     gene            complement(884..1621)
                     /locus_tag="VIQ50_08835"
     CDS             complement(884..1621)
                     /locus_tag="VIQ50_08835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9360526.1"
                     /translation="MSETIGAATRPQTGAREEEQPPILFLHKIDRHYRQGDVTLDILK
                     GAELAIWPGQSVALIAPSGAGKSTLLHIAGLLEHPDAGEVYIDQIATSELSDAERTRI
                     RRVEIGFVYQFHHLLMEFSAIENVIMPQMIRGLSRQEATRRASDLLGYLGLKERLTHR
                     PAELSGGEQQRVAIARAVANAPRILLADEPTGNLDPRTSEHVFSALTQLVQASGLAVV
                     VATHNMDIAARMDRRVTLKDGLVVELG"
     gene            complement(1614..2882)
                     /locus_tag="VIQ50_08840"
     CDS             complement(1614..2882)
                     /locus_tag="VIQ50_08840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HEY9360527.1"
                     /translation="MHEPTRTRPFAPFEWMLSLRYLRARRKEGFISVNAGFSFLGIML
                     GVATLIIVMAVMNGFRKELLDKILGINGHLLIQPLEQPLTDWERVSERISKVPGVILA
                     APVVEGQALASSPFNASGVLVRGVRAADLAKLPSVANNIRQGTLEGFDEGQGVAIGRR
                     LADQLSLRAGDSVTLVAPRGAVTPMGTTPRIKSYRIAAVFEVGMSEYDSAFVFMPLPE
                     AQAYFNRAGDVTAIEVYVDNPDQIDYHRRLITEAAGRPVFLIDWRQRNATFFNALQVE
                     RNVMFLILTIIVIVAAFNITSGLIMLVKDKGRDIGILRTMGVSQGGIMRIFMVTGASV
                     GVVGTLVGFLLALVVCLNIESIRRFLSWLTNTELFSPELYFLSKLPADLDASETTAVV
                     VMALTLSLLATLYPAWRAARLDPVEALRYE"
     gene            complement(3007..4323)
                     /locus_tag="VIQ50_08845"
     CDS             complement(3007..4323)
                     /locus_tag="VIQ50_08845"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008131066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HEY9360528.1"
                     /translation="MRLSRYLLPILRETPKEAEVVSHRLMLRAGLVRQEAAGIYAWLP
                     LGFRVLKKIEQIVREEQDRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIKDRHER
                     DMLYGPTNEDMITEIFRAYVRSYRELPKILYHIQWKFRDEQRPRFGVMRGREFLMKDA
                     YSFDIDEAAARLSYNKMFVAYLRTFARMGLKAIPMAAETGPIGGDLSHEFIILAETGE
                     SGVFCNSDVLELPIPGEEVDYEADLMPHIRPWTSLYAATEDVHDPVRFERDVPADKRL
                     HTRGIEVGQIFYFGTKYSEPMKAVVAGPDGIERPVHGGSYGVGVSRLVGAIIEAFHDE
                     AGIKWPEAVAPFKVALLNLKQGGADTDAACERLYRALSAKGIDVLYDDLDQRPGAKFA
                     TADLIGIPWQILIGPKGLAEGKVEVKKRADGSRELMTEADACERLA"
BASE COUNT          892 a         1456 c         1485 g          775 t
ORIGIN      
        1 ggcggctcgt tcggggcggt ctccagaaag gcgcgcgagg caagccgcat gaggctgcga
       61 tagccgctct cgcgcgcggc gaggagcacg atgcggggac gatcgaattg cgcacctcct
      121 cccgtgcgcg ggaaagcttc ctggtcgccg aaatcgaccg ccagcgcgca gccgacgatc
      181 ggctggatgc ccgccgccgc catcttgtcg gagaattcaa gcgctccgaa catattgtcg
      241 gtgtcggtga gcgcgagcgc gggctgacgg tccgacttgg cgagttcgca cagccgcgcg
      301 atgggcaagg cgccttcgag cagcgaatag gacgaatgca cgtgcagatg gacgaagcca
      361 ggcatcaaac cctcgggcga ttctcgacgc gttgcgaatc tgagggtgcg tggaggcgct
      421 gtctatcgtg ggcaagctcg ccgcgggcgg cttgtcccca acatctcgca cgtggggtac
      481 acgtcgacga ggcacgcccc ggtgcgatcc ctcgccgcga cccctcaaag ggccgcgatc
      541 acttgcgccc agatcgcgac catgcccaag aacagggcga gcgacgccag cgtcgcggcc
      601 tcctcaacga cggcacgaac catgacacct aactcccacc cgcggaacga gaggtgaaca
      661 tagttcatga tatgttcgcg tgtcaagtcg gcctaggggg ctgaagggag cccactcaaa
      721 gtccgcaaca agaggaagaa acctctaggc tattgcacgt atcagttgcg ttatttttaa
      781 aaaaaaacag gcggaaacag gcgccgcgac cccgtggcaa ggaagagagc caagctaagc
      841 ccaccgcttc gctgggatgg gcggcacggc tcatctccgc ccatcaaccc agttccacca
      901 ccagtccatc cttgagggtg acgcgccggt ccatgcgcgc ggcgatgtcc atattgtggg
      961 tggcgacgac gaccgcgagg ccggaggcct gcaccagctg ggtgagcgcg gagaacacgt
     1021 gctcggaggt gcgcgggtcg aggtttcccg tcggctcgtc ggcgagcaga atgcgcggcg
     1081 cgttggcgac cgcgcgcgcg atcgcgacgc gctgctgttc gcccccggaa agctccgccg
     1141 ggcggtgggt gaggcgctcc ttcaatccga gatagccgag cagatcgctc gcacggcgcg
     1201 tcgcttcctg gcgcgagagg ccgcggatca tctgcggcat gatcacgttc tcgatcgcgg
     1261 aaaactccat gagcaagtga tggaactggt agacgaagcc gatctcgacc cggcggatgc
     1321 gcgtgcgctc ggcgtccgag agctccgagg tcgcgatctg atcgatatag acttccccgg
     1381 cgtctggatg ctcgagcagt ccggcgatat gcaagagcgt ggacttgccg gcgccggagg
     1441 gggcaatcag cgccacggat tggcccggcc atatggcgag ctcggcgcct ttgaggatgt
     1501 ccagcgtgac gtcgccttgg cggtaatgcc ggtcgatctt gtgcaggaac aggatcggcg
     1561 gctgctcctc ctcgcgcgcg ccggtctgcg gcctcgtcgc cgcgccgatc gtctcactca
     1621 tagcgtagcg cctcgaccgg atcgaggcgc gccgcgcgcc aagccggata gagtgtcgcc
     1681 agcagcgaca acgtgagcgc cataaccacc accgccgtgg tctcgctggc gtccagatcg
     1741 gcgggcagtt tcgacaggaa atagagctcg ggcgagaaca attcggtatt cgtcagccat
     1801 gacaggaaac ggcggatcga ttcgatgttg aggcagacca ccagcgccaa caggaaaccc
     1861 acgagcgtgc cgaccacgcc gaccgaggcg ccagtgacca taaagatgcg catgatcccg
     1921 ccctggctca cgcccatggt gcgcagaatg ccgatgtcgc gccccttgtc cttcaccagc
     1981 atgatcagcc cggacgtgat gttgaacgcc gccacgatca cgatgatggt caagatgaga
     2041 aacatgacgt tgcgctcgac ctgcagcgca ttgaaaaagg tggcgttgcg ttggcgccag
     2101 tctatcagga agaccggccg tccggccgcc tcggtgatga gccggcggtg gtaatcaatc
     2161 tgatcgggat tgtcgacata gacctcgatg gcggtaacgt cgccggcgcg gttgaaatag
     2221 gcctgcgctt cgggaagcgg catgaacacg aaggcggaat cgtattccga catgccgacc
     2281 tcgaacaccg cggcgatccg ataggacttg atccgcggcg tggtgcccat cggcgtcacc
     2341 gccccgcgcg gggcaaccag ggtcacgctg tcgcctgccc gcagcgatag ctgatcggcc
     2401 aacctgcggc cgatggcgac cccttgccct tcgtcgaagc cttcgagcgt gccctggcgg
     2461 atattgttgg caacggaagg cagcttggcg agatcggcgg cgcgcacgcc gcgcacgagc
     2521 acgcccgagg cattgaacgg cgaggatgca agcgcctggc cctcgaccac tggcgcggca
     2581 aggatcacgc cgggaacctt ggagatgcgc tcggaaaccc gctcccagtc ggtgagcggc
     2641 tgctccagcg gctggatcaa cagatggcca ttgatgccca aaatcttgtc cagcaactcc
     2701 ttccgaaagc cgttcattac cgccatgacg atgatgaggg tggcgacgcc gagcatgatg
     2761 ccaagaaacg agaatccggc attgaccgag atgaaaccct ccttccgccg cgcacgcaga
     2821 tagcgcagcg acagcatcca ttcgaacggc gcgaatgggc gggtgcgggt cggctcgtgc
     2881 atcgatctaa tcccggtccc ccgattttca cacgattctg gccgtttcag gccctccgcg
     2941 ggatacggcc tgcgcgagag ttccgacggg tggtgtggaa cctctcctcg tcatgcgccc
     3001 gattcatcag gccagccgct cgcacgcatc ggcctcggtc atcagctcgc ggctgccgtc
     3061 ggcgcgtttt ttgacctcga ccttgccctc cgcaaggccc ttcggcccaa tcaggatctg
     3121 ccaggggatg ccgatgagat cggcggtggc gaatttcgcg cccggccgct ggtcgagatc
     3181 gtcgtagagc acgtcgatgc ctttggcgct cagcgcgcgg taaagccgct cacaggcggc
     3241 atcggtgtcg gcgccaccct gcttgaggtt gaggagcgcg actttgaacg gcgcgaccgc
     3301 ctccggccat ttgatgcccg cctcgtcgtg gaacgcttcg atgatcgcgc cgaccaggcg
     3361 tgatacgccc acgccgtaag agccgccatg caccggccgc tcgatcccgt cgggacccgc
     3421 cacgaccgcc ttcatcggct cggaatactt ggtgccgaaa tagaagatct ggccgacctc
     3481 gatgccacgg gtgtgcaagc gcttgtcggc gggaacgtcg cgttcgaagc gcacgggatc
     3541 gtgcacgtcc tcagtcgcag catagaggct ggtccacgga cggatgtggg gcatcaaatc
     3601 cgcctcgtaa tcgacctcct cgccgggaat aggcagttcg agcacgtcgc tattgcagaa
     3661 aaccccggac tcgccggttt ccgcgagaat gatgaactcg tgcgagaggt cgccgccgat
     3721 gggcccggtt tccgccgcca tcggaatggc tttaagcccc atgcgcgcaa aggtgcgcaa
     3781 ataggcgacg aacatcttgt tgtaggagag ccgcgccgcc gcttcgtcga tatcgaacga
     3841 gtaggcatcc ttcatcaaaa attcgcgccc gcgcatcacg ccaaagcgcg ggcgctgctc
     3901 gtcgcggaat ttccattgga tgtgatagag gatcttcggc aactcgcgat acgagcgaac
     3961 atatgcacgg aaaatttcgg tgatcatgtc ctcgttggtc ggcccataaa gcatgtcgcg
     4021 ctcatggcga tctttgatgc gcaacatttc cggaccgtag gcgtcataac gcccgctctc
     4081 gcgccaaagg tcagcgagct gcaaggtggg catcaagagt tcgatcgcac ccgcgcgatc
     4141 ctgctcctcg cgaacgatct gctcgatctt cttgagcacc cggaacccga gcggcagcca
     4201 ggcgtaaatg ccggccgcct cctggcggac cagccctgcc ctcaacatca gccgatggga
     4261 gacgacctct gcctccttgg gtgtctcgcg aaggatgggc aggaggtagc gggagaggcg
     4321 catggggctc gggactcgtg gccggtcggg tccaccgagt gaaaccggaa cggagacaaa
     4381 aagacaaggg ctgtcaaagc cttccacgcg cgttttgcat tggcttcatc ggcgctgctg
     4441 cggccatgcc gcgcagtacc cgcccgcgag agatctcacg ggtttccgcg acgttttgac
     4501 tttgatgaca aaccaagcgg gatgggctag cgtcccaccc gcggggccga ggggcgagca
     4561 acgccgtcgg cccacgcagt ccaagtctgg gaggaacaag ccggcgca
//
LOCUS       DATCWM010000452         2076 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_456688, whole genome shotgun sequence.
ACCESSION   DATCWM010000452 DATCWM010000000
VERSION     DATCWM010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2076
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_456688"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1676
                     /locus_tag="VIQ50_08850"
     CDS             <1..1676
                     /locus_tag="VIQ50_08850"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEY9360529.1"
                     /translation="AVNPGTIDGGASADTAVGDFEAVFAAAPAKIDAYYTTPYQHSAP
                     MEPHASMAFWEGEMLTVCTAAQLTTSPREGLARTLNIPPENVRIITRYIGGGFGNKLP
                     YFVDVTLAAIGARMLRRPVKVAMTRPQVFNITTHRSASEQRVRLGADRQGRLTAYGQD
                     ALVQSARFDTFTEPVSLAARSLYAAPNRLTRHRRAGLDLSRSDSMRGPGDAIGLLALE
                     CAMDELAETLALDPVELRLRNDTQLEPEQHKPFSSRHLAECLREGAARFGWDKRVPKP
                     ASVRDGPWLVGMGVASAIRGDLLKHASARARLESDGRLTVELAMTDIGTGTYTILTQI
                     AAETMQLPVDRVTVRLGDTNFPPTDGSGGSWGAATSGAAVLAACRKLKAGLPSGITEA
                     EGSVTPADLDNNYAHDAFGAHFAEVGVHRDTGEVRVRRMLGVFAAGHILNAKTARSQM
                     IGGMTWGIGSALMEGNQVDMRYGSFINQDLASYHVAVNADIGAIEAILLDEADPHGSP
                     LGSKGLGELGICGAGAAVINAIYNATGARIRDIPATPDKLLPALEALDG"
BASE COUNT          374 a          689 c          667 g          346 t
ORIGIN      
        1 atgcggtgaa tccgggcacg atcgatggag gcgcgtcggc cgataccgcg gtcggcgact
       61 tcgaggctgt ctttgccgcc gctcccgcga agatcgacgc ctactataca acgccttacc
      121 agcactcagc tccgatggag ccgcacgcga gcatggcgtt ctgggagggc gagatgctga
      181 ccgtgtgcac ggcggcacag ttgacgacga gcccgcgcga gggactggcg cggaccctca
      241 acattccccc ggagaatgtg cgcatcatca cgcgatatat cggcggcggc ttcggcaaca
      301 agttgccgta ctttgtcgat gtgacgcttg ccgccatcgg cgcgcgcatg ctgcgcaggc
      361 cggtgaaggt ggcaatgacg cgcccgcagg tcttcaacat caccacccat cgcagcgcgt
      421 ccgagcagcg cgtgcggctg ggcgccgacc gccagggtcg gctgaccgcc tatgggcagg
      481 acgcgctagt gcagtccgcg cgattcgata cgttcacgga gccggtttcc ctcgcggcac
      541 gcagcctcta tgccgcgccg aacagactca cccgccatcg ccgtgcaggg ctggatttgt
      601 cacgctccga ctcgatgcgc ggccccggcg acgcaatcgg gctgttggcg ctagaatgtg
      661 cgatggatga gctggccgag acgctcgcgc tcgatccggt cgaattgcgc ctgcgcaacg
      721 acacgcagct cgagccggag caacacaagc cgttttcctc gcgccacctc gccgaatgct
      781 tgcgcgaagg cgctgctcgc ttcggttggg ataaacgcgt ccccaagccg gcgagcgtgc
      841 gagacgggcc ctggctcgtg ggcatgggcg tcgcctcggc gatccgcggc gacctcctga
      901 agcacgcgag cgcacgagcg cgtctggaga gcgatggccg cttgacggtc gaactcgcca
      961 tgacggacat cggcaccggc acctacacga tcctgacgca aatcgccgcc gagacgatgc
     1021 agctaccggt cgatcgcgtc accgttcgcc tcggcgacac caattttcct ccgaccgatg
     1081 ggtcgggcgg ctcctgggga gcggcgactt ccggcgctgc ggtgctcgcc gcttgccgca
     1141 agctcaaggc cggccttcct tccgggatca cggaagcgga ggggtcggtc acccccgccg
     1201 atctcgacaa caactacgca cacgacgcct ttggcgcgca tttcgccgaa gtgggcgtgc
     1261 accgggatac gggcgaggtt cgcgttcggc gcatgctcgg ggtgttcgcg gccggccaca
     1321 ttctcaatgc caagaccgca cgctcgcaga tgattggcgg gatgacctgg ggtatcggct
     1381 cggcgctgat ggagggaaat caggtcgaca tgcgctacgg ctcgttcatc aaccaggatt
     1441 tggcgagcta ccatgtcgcg gtgaacgccg acatcggcgc aatcgaagcc atacttctcg
     1501 atgaggccga cccgcacggc agcccgctcg gcagcaaggg actcggcgaa ctcggcatct
     1561 gcggcgcggg ggcggcggtc atcaacgcga tatacaacgc caccggcgcg cgcatccgcg
     1621 atatccccgc cacgcccgac aagctgctcc ccgcgctcga agcgctcgac ggctaactgt
     1681 gggtagcctt tccgaaccgc tcttgatgtc tggcaaagtt gaggattcct caaacagcaa
     1741 gcgctgacac cacaatgatc gtctgcttgc aacgttgtga gtgatcacca gatacgaaac
     1801 gtggtgaggg cgtcgcccga gcaagcgctg agtgcacgcc gggtctacga ttgcctcggc
     1861 tgcagcatcc gatgcggacg atgcgccagc gcaatcaacc ggatcatcac cgaggcctgc
     1921 gctgagcagg tgccagaggc cttccggtcc cacgctctcc cgctataaat atcttcggtt
     1981 gcattgcagc ggttgcattg caaagctcgc ctacggatgc tggatcgccg cggccgactc
     2041 ggcggaagtg gcgcaagatc gccccatcca cggcaa
//
LOCUS       DATCWM010000453         4016 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_430010, whole genome shotgun sequence.
ACCESSION   DATCWM010000453 DATCWM010000000
VERSION     DATCWM010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4016)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4016)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4016
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_430010"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..413
                     /locus_tag="VIQ50_08855"
     CDS             <1..413
                     /locus_tag="VIQ50_08855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY9360530.1"
                     /translation="DVPFATVEADDATVFPAPRVPFLRAWISARGHIGRALVRDGNLA
                     AWGVIRPCRRGHKIGPLVADDRDAAESVLAALIAAAGADEVFLDVPSVNRNALALAQD
                     YGLAPVFETARMYTGAIRPLLLERVFGVTTFELG"
     gene            complement(533..805)
                     /locus_tag="VIQ50_08860"
     CDS             complement(533..805)
                     /locus_tag="VIQ50_08860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360531.1"
                     /translation="MRIVAILVFTALLAGCSASSRLEDVVPAWANTPPPHPAAQHAAR
                     RNQPEGRSAVAAEPKPAAEAQSEARKPAAAPEQPSKKPDTQSASEE"
     gene            1049..1543
                     /locus_tag="VIQ50_08865"
     CDS             1049..1543
                     /locus_tag="VIQ50_08865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012978330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEY9360532.1"
                     /translation="MSSVTRPNQSTRGAMVPDQPWIDRSAAACSDLVCLLGRILIGGI
                     FVQSGFGKLMGLDAFAAGLARNGIPGAVAQVLAPIGAAVEFVGGLAIVFGLMTRYAAV
                     LMILFVIVATLISHRFWVLQGTERRTQSVQFAKNAAIIGGFLFVFATGAGRVSLDRWW
                     RRVE"
     gene            complement(1549..2235)
                     /locus_tag="VIQ50_08870"
     CDS             complement(1549..2235)
                     /locus_tag="VIQ50_08870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012041251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell cycle transcriptional regulator TrcR"
                     /protein_id="HEY9360533.1"
                     /translation="MGAVPLMPKATAVWLVENTALSFDQVADFCKLHPLEVKAIADGD
                     AAQGIKGLDPVLTGQLSREEIEKGVADPNYRLKLLDPKVRLPEAKRKKGPRYTPVSRR
                     QDRPNAILWLVRNHPEVKDSQIMRLVGTTKSTIQAIRERTHWNASNLQPMDPVTLGLC
                     SQIDLDLEVQRAAKEKPVDAEAQGATLLPAAETTVRREPEPEQNKKPGDELDVDAVFA
                     KLKQLGGKSE"
     gene            complement(2373..3413)
                     /locus_tag="VIQ50_08875"
     CDS             complement(2373..3413)
                     /locus_tag="VIQ50_08875"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEY9360534.1"
                     /translation="MKAIVMHRYGPPDVLEYETVPDPEPRAGEIRIRVHAATVNRVLD
                     VSLRAGNERARGAILPLIPGVDCAGVVDAVGSAVTRWRKGMRVAAAGIMPLDICSEDG
                     AGYEGPTGMMGIKRPGGFAEMVAVPACAAIELPDGLDFHHAAVIMRHVPTAWNLLVNI
                     AELKAGESVLIMGAGGNLGSIGIQIAKNVIGADVIAAAGSDARVAIGLALGADHGVNY
                     NLADLQAEVMRLTGGKGVDVLYDNIANPKVLPSAFHALGFDGRLVTAGAHGGPNVAID
                     FSHLYHKRITIKGRPGYRRSDVPKCFAAAAEGKVKAQIERILPLSRAAEAHRLVESGE
                     ATGKIVLDPTRG"
     gene            3625..>4016
                     /locus_tag="VIQ50_08880"
     CDS             3625..>4016
                     /locus_tag="VIQ50_08880"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY9360535.1"
                     /translation="MDANGKCACAELIQSWGLYRDQGKWPQLLATFVPEGEIAVSWFS
                     GSFREFVDRCRQSFEAGQRSKHLIFPSLVRVAGERACAETNIVILVRQKIADVLADLT
                     SYARFVDRLERRDGRWAIVERAAVYERDR"
BASE COUNT          649 a         1264 c         1347 g          756 t
ORIGIN      
        1 cggacgtgcc gttcgcaacc gttgaggcgg acgacgccac cgtgtttccg gcaccgcgcg
       61 tgccgttcct gcgcgcgtgg atcagcgcgc gcgggcatat cggccgcgcg ctcgtgcgcg
      121 acggcaatct cgccgcgtgg ggggtgatcc gtccgtgccg gcgcgggcac aagatcggcc
      181 cgctggtggc ggacgaccgc gacgcggccg agtccgtgct cgcggcgttg atcgcggcgg
      241 caggcgcgga cgaagtcttt ctcgatgtgc cgagcgtcaa tcgcaatgcg ctcgcgctcg
      301 cccaggatta cggccttgcg ccggtattcg agaccgcgcg gatgtacacc ggtgcgatcc
      361 ggccgctgct gctcgaacgc gtgttcggcg ttaccacgtt cgagctgggc tgaggcgcgg
      421 gagtgaaact ttgcgtggag ctgccgaaag gtcgagctca acgccgcagg agcgcactta
      481 acacagggga gccgtcgctc cagcgctcac gccgcacagc cagccagcca gcctactctt
      541 cggaagcgct ctgagtgtcg ggcttcttcg acggttgttc tggcgctgcc gcaggcttgc
      601 gcgcttctga ttgtgcttcc gccgccggtt tcggttccgc tgcaactgcg ctgcggcctt
      661 ctggctggtt gcggcgcgcg gcatgctggg ccgcggggtg cggcggtggc gtatttgccc
      721 acgcgggaac aacgtcttca aggcggctgc tggcggaaca accggcaagc agcgccgtga
      781 aaaccaaaat tgcaacgatg cgcatgagga tgaggccccg cgcttagttt gcgcacccca
      841 atgcggaaaa attaggaccg gttccggctt cgggtcctcc cgccaagcac tactccggcg
      901 gttttccgca acacgagctg ttgttctcct ttgcgttcca aggagacatc ttcggcaaaa
      961 gctcggaagt cctctcgtac tcgtgaacgg cggtgcatgg aatcgatcag gtttgccgct
     1021 aggctgtgct ccgcatcgga ggcagaccat gagcagtgta acccgtccca atcaaagcac
     1081 ccgcggcgcg atggttcccg atcagccgtg gatcgaccgc tccgccgcgg cctgcagcga
     1141 cctcgtctgc ctgctgggac gcattttgat cggcggcatt ttcgttcaga gcgggtttgg
     1201 gaaactgatg ggactcgacg cattcgccgc cggcttggcg aggaacggta tacccggcgc
     1261 tgtcgcgcag gtgctggcgc cgatcggcgc ggctgttgag ttcgtcggcg gcctcgccat
     1321 cgtctttgga ctgatgacgc gctacgccgc agtgctgatg attctgttcg tgatcgtcgc
     1381 gacgctgatc tcgcaccggt tctgggtgct gcagggcacc gagcgtcgca cgcaatcggt
     1441 ccaattcgcc aagaatgcag cgattatcgg tggttttctc ttcgttttcg ccaccggcgc
     1501 gggccgcgtg agcctcgatc gctggtggcg tcgtgtcgag taggcgcgct actcgctttt
     1561 gccaccgagt tgcttgagct tggcgaacac ggcatcgacg tcgagctcgt cgcccggctt
     1621 cttgttctgc tccggttcgg gctcgcggcg cacggtggtc tcggcggccg gcagcagcgt
     1681 ggcgccttgc gcctcggcgt ccaccggctt ctccttggcg gcgcgctgaa cctcgagatc
     1741 gagatcgatc tgcgagcaca ggccgagcgt aaccggatcc atcggctgca gattcgaggc
     1801 gttccagtgg gtgcgctcgc ggatcgcctg aatggtcgac ttggtggtgc cgacgagccg
     1861 catgatctga ctgtccttaa cctcgggatg attgcgcacc agccagagga tggcgttcgg
     1921 acgatcctgg cggcgcgaga cgggcgtgta gcgcgggcct ttctttcgct tggcctcggg
     1981 aaggcggacc ttgggatcga gtagcttgag ccggtaattc gggtcggcga cgcccttctc
     2041 gatctcctcg cggctgagct gcccggtgag cacgggatcg aggcccttga tgccctgcgc
     2101 cgcatcgccg tcggcgatcg ccttcacctc gagcgggtgc agcttgcaga agtcggcgac
     2161 ctgatcgaag gagagcgcgg tgttctcgac cagccacacg gcggtcgctt tcggcatcag
     2221 cggtacggct cccatggcta aatctcctct gtgctccgcc caccctttcg ggcgaagctt
     2281 ggtgtcatcg gcgatgacgg aagtgaacgg aatataggca ttcgcccacc cgcggcgcaa
     2341 tggggctcag tgatagcata aacgaacgca ctctaccccc gcgtcgggtc gagcacgatc
     2401 ttgcccgtcg cctcgcccga ttcgaccaaa cgatgcgcct cggcggcgcg cgacagcggg
     2461 agaatgcgct cgatctgcgc cttgaccttg ccttcggcgg cggcggcgaa gcatttcggc
     2521 acgtcggatc gccgatagcc cggccgtccc ttgatggtga tgcgcttgtg gtagaggtgg
     2581 gaaaaatcga tggcgacatt gggccccccg tgcgcgccgg cggtgacgag ccggccgtcg
     2641 aaaccgagcg cgtggaaggc gctcggcagc accttgggat tggcaatgtt gtcgtagagc
     2701 acgtcgacgc ccttgccgcc ggtcaggcgc atgacctcgg cttgcaagtc ggcgagattg
     2761 tagttcacgc cgtgatcggc gccgagcgcg aggccgatcg cgacacgcgc gtcagaaccg
     2821 gcggctgcga tgacgtcggc gccgataacg ttcttggcga tctgaatgcc gatcgagccg
     2881 agattgccgc ccgcgcccat gatcagcaca ctctccccag ctttgagctc agcgatgttg
     2941 acgagcagat tccaggcggt cggcacgtgg cgcatgatca cggcggcgtg gtgaaagtcg
     3001 agcccgtcgg gaagttcgat cgccgcgcag gccggcaccg caaccatctc ggcaaagccg
     3061 ccggggcgtt tgatgcccat cattccggtt ggcccctcgt agccggcgcc atcctcggag
     3121 caaatgtcga gcggcatgat gccggcggcg gcgacccgca ttccctttcg ccagcgcgtg
     3181 acggcggatc cgaccgcatc gacgacgccg gcgcaatcga cgcccgggat gagcggaagg
     3241 atggctccgc gagcgcgctc gttacccgcc cgcaagctca cgtcgagcac gcgattgacg
     3301 gtggcggcat ggacgcggat gcgaatctcg cccgcgcgcg gctcggggtc cggcacggtc
     3361 tcgtactcga gcacgtccgg cgggccatag cggtgcatca cgatcgcttt catgcggagc
     3421 cttgagtcat cacagcgagt cgaacggtgt gtatccacgt gttcgtgttg ggcagagcaa
     3481 gtcctatatg gccgggaacg aaccccggcc atggcgaaac agaactagca agcatcgcag
     3541 ccaaagacca attgcggtat cttcttgcgc catcctaaag tgccgcgtgc cgctgggaac
     3601 gaggaacgaa accgggcagg atccatggat gcgaacggca aatgcgcatg cgccgaacta
     3661 atccaatcct ggggactcta tcgcgatcaa ggcaagtggc cgcagctgct cgcgaccttc
     3721 gtgccggagg gcgagattgc ggtctcctgg ttcagcggaa gctttcgcga attcgtcgac
     3781 cgctgccggc agagcttcga ggcgggacag cgctccaaac atctgatctt tccctccctc
     3841 gtgcgcgtcg cgggcgagcg cgcgtgcgcc gagaccaaca tcgtgattct ggtgcgccag
     3901 aagatcgcgg acgtgcttgc tgacctgacg tcctacgctc gctttgtcga tcgcttggag
     3961 cgaagagacg gacgttgggc gatcgtggag cgcgcagccg tctatgagcg cgaccg
//
LOCUS       DATCWM010000454         3376 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_472837, whole genome shotgun sequence.
ACCESSION   DATCWM010000454 DATCWM010000000
VERSION     DATCWM010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3376)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3376
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_472837"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..319)
                     /locus_tag="VIQ50_08885"
     CDS             complement(<1..319)
                     /locus_tag="VIQ50_08885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020180884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis protein MetW"
                     /protein_id="HEY9360536.1"
                     /translation="MNLNVPSHSVRASDTSRVDLLLIAEMVTPGARVLDVGCGDGTLL
                     RLLAEKRGVDGRGIELSQAGVNSCVAQGLAVIQGDADTDLVYYPDLAFDYAILSQTIQ
                     ATYS"
     gene            complement(316..1500)
                     /locus_tag="VIQ50_08890"
     CDS             complement(316..1500)
                     /locus_tag="VIQ50_08890"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006200228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HEY9360537.1"
                     /translation="MSETPTAQSITDSSVRLAQIANPQSHIVHFNEKLPLDCGSELAQ
                     FSIAYQTYGELNAAKSNLVLVCHALTGDQHVANLHPVTGKPGWWETMVGPGKPIDTNR
                     YFVLCANIIGGCMGSTGPSSTNPASGRPYGPDFPVITVRDMVRAQARLFDHLGIADVL
                     CVLGGSMGGMQVLEWAASYKDRVFAAVPIACSARHSSQNIAFHEVGRQAVMADPDWCQ
                     GRYLEEDKSPRKGLAVARMAAHITYLSDAALHRKFGRNLQDREKVAFGFDADFQVESY
                     LRHQGLSFVDRFDANSYLYITRAMDYFDIAADHDGVLANAFRGTRTRFCLVSFTSDWL
                     FPTEESREIVHALNAVAAKVSFVEIRSDKGHDAFLLHEPELFDTIRGFLGAAARKRGI
                     VA"
     gene            1652..2773
                     /gene="hisC"
                     /locus_tag="VIQ50_08895"
     CDS             1652..2773
                     /gene="hisC"
                     /locus_tag="VIQ50_08895"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019965320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HEY9360538.1"
                     /translation="MAAAKRGPTPRPGVLDIAPYVPGTSALAGARPVIKLSSNETPFG
                     PSPRAIEAYLAAASSLSRYPDGSARALREAIGKMYGLDPGHIVCGAGSDELLNLLAGA
                     YLGPGDEAIYSEHGFLVYKIAILARGATPVVAREIDLTANVDAILARLTDKTRVVFIA
                     NPNNPTGTYIPFDEVKRLRAGLPDHVLLVLDAAYAEYVRRNDYEAGIELVATTQNTVM
                     TRTFSKIYGLAYLRIGWAYCPAEVADVLNRIRGPFNVSGPAIAAGVAALQDQAWVQRA
                     VEHNETWRSRMADSLSAIGLGVTPSAANFLLLHFKKGNGKSAPEADKFLHEKRIILRR
                     VTEYGFPDALRMTIGTEEENRAVIDALTSFMGANGSSRR"
     gene            2770..>3376
                     /locus_tag="VIQ50_08900"
     CDS             2770..>3376
                     /locus_tag="VIQ50_08900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004665 - prephenate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0008977 - prephenate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006571 - tyrosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase/arogenate dehydrogenase
                     family protein"
                     /protein_id="HEY9360539.1"
                     /translation="MSEPLFDRLAIIGTGLIGSSIARAARAQGAVRTIVATSHSSQTR
                     KRIKELGIADEVAETNAEAVKGGDLVVVCVPVGVCGDVAKEIGTNLKPGATVSDVGSV
                     KGSIVRAMSPHLPKTVNFVPAHPVAGTEHSGPDAGFAELFDNRWCILTPPEGTNKEAV
                     EKLAAFWRLLGANVEVMTPDHHDLVLAITSHLPHLIAYTIVG"
BASE COUNT          627 a         1092 c         1058 g          599 t
ORIGIN      
        1 gcgagtaggt cgcctgaatg gtctgcgaca ggatcgcgta gtcgaaggca aggtcagggt
       61 agtagacgag atcggtgtcg gcgtcgccct gaattacggc aagaccttgc gccacgcagg
      121 agttcacgcc ggcctgcgac agctcgatgc cgcgcccgtc gacgccgcgc ttttcggcaa
      181 gcagccggag cagcgtgccg tcgccacagc cgacgtcgag cacgcgcgcg cccggcgtca
      241 ccatctcggc gatgagcagg aggtctacgc ggctcgtgtc agaggcgcgc acgctatgag
      301 agggcacgtt gaggttcatg ccacgatccc ccgcttgcgc gcggcagcgc ctaagaaacc
      361 gcgtatcgta tcgaacagct cgggctcgtg cagcaggaag gcatcatgcc ccttgtcgga
      421 cctgatttcg acgaagctca ccttggccgc gacagcgttc agagcatgca cgatctcgcg
      481 gctctcctcg gtggggaaca gccagtcgga cgtgaacgac accaggcaga agcgcgtcct
      541 ggtgccgcgg aaggcattgg cgagcacgcc gtcatggtcc gccgcgatgt cgaaatagtc
      601 catggcgcgc gtgatgtaga gataggagtt ggcatcgaag cgatcgacga agctcaatcc
      661 ctggtgacgc aaatagctct cgacctggaa gtcggcgtcg aagccgaacg ccaccttttc
      721 gcggtcctgg agattgcgcc cgaatttccg atgcagcgcc gcgtccgaca gataggtgat
      781 gtgcgcggcc atgcgcgcga ccgcgagccc cttgcgcggg ctcttgtcct cttcgagata
      841 gcggccctgg caccaatcag gatccgccat caccgcctgg cggccgacct cgtggaaggc
      901 gatgttttgc gaggagtggc gcgctgagca ggcgatcggc accgcggcga acacgcggtc
      961 cttgtaactt gcggcccatt ccagcacctg catgccaccc atcgagccgc ccagcacgca
     1021 gagcacgtcg gcgatgccga gatgatcgaa cagccgggct tgcgcgcgca ccatgtcgcg
     1081 cacggtgatg accgggaaat ctgggccgta gggtcgtcca ctggcagggt tggtcgagct
     1141 cggcccggtc gagcccatgc agcccccgat gatattggcg cacagcacga aatagcggtt
     1201 ggtgtcgatc ggcttgcccg ggccgaccat ggtctcccac cagcccggct tgccggtgac
     1261 cggatggagg tttgcaacat gctggtcgcc ggtcagcgca tggcagacga gcacgaggtt
     1321 cgacttggcg gcattaagct cgccataagt ctgataggcg atagaaaact gcgcgagctc
     1381 gctcccgcag tcgagcggca gcttctcgtt gaaatgaacg atatggcttt gcggattggc
     1441 gatctgcgcc aaccgcaccg aactgtcggt gatggactgc gccgtcgggg tctcgctcat
     1501 gccacttcgg ggtcactccc cgccaaacct ctatttacac aattcggcgt tagctaggag
     1561 cttaccgccg aaagtcaatc ttttctttgc cttggcgcaa ggattgggcc tatgagaggc
     1621 cgcctgcaac acccaccgag gagtgagaca gatggccgcc gccaagcggg gcccaacccc
     1681 ccgtcccggc gttctcgaca tcgcgcccta cgtgccgggc acgagcgcgc tcgccggcgc
     1741 acgcccagtc attaagctct cctcgaacga gactccattc gggccgagcc cgcgtgcgat
     1801 cgaggcttac ctcgcggctg ccagctcctt gtcgcgttac cccgacgggt cagcccgcgc
     1861 gctgcgggag gcgatcggca agatgtatgg gctcgatccc ggccatatcg tctgcggcgc
     1921 aggttccgac gagctcttga acttgctggc aggcgcctat ctcgggccag gcgatgaggc
     1981 gatctatagc gagcacggtt tcctggtcta caagatcgcg atcctggcgc gcggcgccac
     2041 gcccgtcgtt gcgcgcgaga tcgacctcac cgcaaacgtc gacgccatcc ttgcgcgcct
     2101 aacggacaag acgcgggtgg tgtttatcgc caaccctaac aacccgaccg ggacctacat
     2161 cccgtttgat gaggtgaagc ggctgcgcgc cggcttgccc gaccacgtgc tgctcgtgct
     2221 ggacgcggcc tatgcagagt atgtgcgtcg taatgactac gaggcaggca tcgaactcgt
     2281 cgccactacg cagaatacgg tgatgacgcg caccttctcc aagatctatg ggctcgccta
     2341 tttgcgcatc ggctgggcct attgcccagc ggaagtcgcc gacgtgctga atcgcatcag
     2401 aggtcctttc aatgtctcag gccctgccat cgccgcaggc gtcgcggcct tgcaggatca
     2461 ggcctgggtg cagcgcgcgg tcgaacacaa cgagacatgg cgctcgcgca tggccgattc
     2521 gctctcggcc atcggtcttg gcgtgacgcc gagcgccgcg aactttctgc tgctgcattt
     2581 caaaaaaggc aatggcaagt cggcaccgga ggctgacaag ttcctgcacg aaaagcgcat
     2641 catcttgcga cgcgtgaccg aatacggctt ccccgatgcg ctccgcatga ccatcggcac
     2701 tgaggaggag aaccgcgccg tgattgacgc cctcacctcc ttcatgggcg ctaacggctc
     2761 gtctcgccga tgagcgaacc cctttttgac cgcctcgcca tcatcgggac tggcctgatc
     2821 ggctcgtcca tcgcgcgcgc agcgcgggcg caaggcgccg tgcgaaccat cgtcgccaca
     2881 tcgcattcct cccagacgcg gaagcgcatc aaggagcttg gcatcgccga tgaggtagca
     2941 gagaccaatg ccgaagcggt gaagggcggc gacctcgtcg tcgtgtgcgt tccggtcgga
     3001 gtgtgcggcg atgtggccaa ggaaatcgga acgaacctca agcccggcgc gacggtttcc
     3061 gatgtgggct cggtcaaggg ctcaatcgtg cgcgccatga gcccgcatct gccgaagacc
     3121 gtcaatttcg tgccggccca tccggtcgcg ggcaccgagc attcaggccc cgatgcaggt
     3181 ttcgccgagc tgttcgacaa ccgctggtgc attctgacac cgccggaagg tacgaataaa
     3241 gaggcagtcg aaaagctcgc cgcgttctgg cgcctgctcg gcgccaatgt cgaagtgatg
     3301 acgccggacc accacgacct cgtgctcgcc atcaccagcc atcttccgca tctgatcgcc
     3361 tacaccatcg tcggca
//
LOCUS       DATCWM010000455         3555 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_208450, whole genome shotgun sequence.
ACCESSION   DATCWM010000455 DATCWM010000000
VERSION     DATCWM010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3555)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3555)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3555
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_208450"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..259
                     /locus_tag="VIQ50_08905"
     CDS             <1..259
                     /locus_tag="VIQ50_08905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="rhodanese-related sulfurtransferase"
                     /protein_id="HEY9360540.1"
                     /translation="ANEARALVDHPVRALDGGNAAWVASGRALTADHPRMADEAIDVW
                     LKPYERPSDHAAAMREYLAWEVDLPARIVRDGSATFTQFGA"
     gene            387..548
                     /locus_tag="VIQ50_08910"
     CDS             387..548
                     /locus_tag="VIQ50_08910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360541.1"
                     /translation="MLDAKAYKAHFPDDPAYELPPGVPRQLNSAALMEALAALEAEFR
                     DILRQSTPE"
     gene            839..2212
                     /locus_tag="VIQ50_08915"
     CDS             839..2212
                     /locus_tag="VIQ50_08915"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY9360542.1"
                     /translation="MRAQLLIVFVVIDVIAGLVAGAVTILQARASTRVEIAASMELAE
                     LLVSEAVALMQQEIPAEKFLADLSSQLRLVRHVRIVVKDAAGSPLVLRGAVSASDTAR
                     DDRAPAWFAALIAPPIASRDMPVIVKAVRVGSVEIVAEPRDEIAEAWGNTVALAAVAL
                     GVNILVIGILYILFGRVLGPLSGIVRGLADLEQRNYRVRLPRPRAKELAAITDRFNAL
                     AQALDALRAENEKLNHRLITAQDDERRRTALELHDEVGPNLFGLKANAASIATAAASL
                     EDQAARKMTERVHDMLAIIERLQSINRSMLNRLRPMALGHVPLREILCELVRDRARQY
                     PQIDFSISAHNLTRSYGDSVDLTIYRCTQESLTNVIRHAQAKHVTIELAEAMIEANAS
                     ANGVLQLALTVRDDGRGIDPSVPPGFGLRGMQERVQALSGSCKVDSASGCGTSIRIVI
                     PLGERRS"
     gene            2209..2838
                     /locus_tag="VIQ50_08920"
     CDS             2209..2838
                     /locus_tag="VIQ50_08920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008840061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY9360543.1"
                     /translation="MTSVLIIDDHPVVLQGCRRMLEDAGVKTVLEARDAASGYRLYRR
                     HRPDVVIVDLAMQEGGLRGLDVIRRMRSHDQRSRILVFSMHSDPIIAARALEAGATGY
                     VLKDSDELMKAFDQVRTGTPYLSNDLAMQVALVRTGVRPNPLAHLTPRELQILSLLAE
                     GKPYGRIADELNVSYKTVVNACSQLKQKLNAKNLPELIRVAVHLISAEP"
     gene            complement(2916..3308)
                     /locus_tag="VIQ50_08925"
     CDS             complement(2916..3308)
                     /locus_tag="VIQ50_08925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-hand domain-containing protein"
                     /protein_id="HEY9360544.1"
                     /translation="MNIRAKSIVTTLALTLIATAPAWSQSLLKRLDPDNDGTIDLAEA
                     KSAASKVFDKLDRDHDGTLDKRELRGRVNAKDFAAADPDNDGTLDKNEFLALVEKRFK
                     AANPDNDGTVDAKELKSAAGRSLARLLN"
BASE COUNT          629 a         1165 c         1099 g          662 t
ORIGIN      
        1 cgctaacgag gcgcgggcgc tcgtcgatca tcccgtgcgt gccctcgacg gcggcaacgc
       61 cgcctgggtc gcctccggcc gcgcacttac cgccgaccat ccgagaatgg ccgacgaggc
      121 gatcgacgtc tggctcaagc cctacgagcg gccgagcgac cacgccgccg ccatgcgcga
      181 gtacctggct tgggaggtcg atctccccgc tcgcatcgtc cgcgacggct ccgccacttt
      241 cacgcagttt ggggcgtagc gttatcaagc ttgtgtgtgg cacgagggca acacgcgttg
      301 ggcgaacgcg cacccgcgcc gcatgcttaa cccaacctta accccggcca agcaatgctc
      361 tcccgctaaa accgaggagc ggcgcgatgc tggatgcgaa agcctacaag gcgcattttc
      421 cggatgatcc ggcctacgag ctcccgcccg gcgtcccccg gcagctcaat tccgccgcgc
      481 tgatggaagc gctcgcggcg ctcgaagccg agttccgcga cattctgcgc cagagcacgc
      541 cggaataacg ctcgggacgc ggcgcgtttt tcccgcgcat ttctgcgcaa agcttcgaaa
      601 gaaccgcgcg cacgcagcga gcaagcagac tcgcccgcgt cttggctcgc ctccgctgtg
      661 gcgccaggat cgcagctaaa ctaccattgc cccgggctcc aggccctatc gtgccaaatc
      721 ttccgccatg gggagggcgt tcatccgcgc cccatccgaa agcccgatgc catcacgttg
      781 gccgccgacg tggctgtctg caccaaccct gtcgcatgcg ctctggcatg gccgctcagt
      841 gcgcgcgcag ctcctcatcg ttttcgttgt gatcgacgtg atcgcgggtt tggtggcggg
      901 cgctgtgacg atcctgcagg cccgcgcgtc cacgcgggtc gagatcgccg cgtcgatgga
      961 gctggccgag ctgctcgtga gcgaggcagt cgccctcatg cagcaagaga ttccggcaga
     1021 aaaatttctc gccgacctca gctcgcaatt gcggctcgtg cgtcacgtgc ggatcgttgt
     1081 aaaggacgcg gccggctctc cgctcgtcct acgcggtgcc gttagcgcct ccgatacagc
     1141 gcgggacgat cgcgcaccgg cgtggttcgc ggcgctaatc gcgcctccga tcgcgagccg
     1201 tgacatgccc gtcatcgtca aggcggtgcg cgtcggctcg gtcgagatcg tggcggaacc
     1261 ccgcgacgag atagcagagg cgtggggcaa caccgtggcg ctcgcggccg tcgcgctcgg
     1321 cgtgaacatt ctcgtcatcg gcattctcta tatcctgttc ggacgggtgc tcggccctct
     1381 gagtggcatc gttcgcggcc tcgccgacct cgaacagcgc aattatcgcg tgcggctgcc
     1441 gcgaccacgg gcgaaagagc tcgccgccat caccgatcgg ttcaatgcgc tggcgcaagc
     1501 actcgatgcc ctgcgcgccg aaaacgagaa gctcaaccat cgactgatca cggcgcagga
     1561 cgatgagcgg cgacgcaccg cgctcgagtt gcacgacgag gttggtccga acttgttcgg
     1621 gctcaaggcc aacgcggctt cgatcgcgac cgcagccgcg tcgcttgagg atcaggccgc
     1681 gcgcaagatg accgagcgcg ttcacgacat gctcgcaatc atcgagcggc tgcagagcat
     1741 caatcgcagc atgctcaacc gtctgcgtcc gatggcgctg ggccacgttc ctttgcggga
     1801 gattctctgc gagctggtgc gcgaccgcgc acggcagtat ccccagatcg acttctctat
     1861 ctccgcgcac aatctcacgc gcagctacgg cgactccgtc gaccttacga tttatcgctg
     1921 tacgcaagaa agtctgacca acgtcattcg acatgcgcag gcaaagcatg tgaccatcga
     1981 actcgccgaa gccatgatcg aagcaaacgc gagcgcgaac ggcgttttgc agcttgcgct
     2041 cacggtccgc gacgacgggc gtggaatcga tccttccgtg ccgccgggtt tcggcctccg
     2101 cggcatgcag gagcgcgtgc aagccctgag cggcagctgt aaagtggaca gcgcgagcgg
     2161 gtgcggcacc tcgatccgca tcgtgatccc gctgggcgag agaagatcat gactagcgtt
     2221 ctgatcatcg acgatcatcc ggtggtgctg caggggtgcc gtcgcatgct cgaggacgcg
     2281 ggcgtcaaga ccgtgctcga agcccgcgat gcggcgtccg gctatcgtct ctaccgccgc
     2341 caccgtcccg acgtggtcat cgtcgacctc gcgatgcagg aaggcggact tcgcggcctc
     2401 gacgtgatcc ggcgcatgcg gtcgcatgat cagcgctcgc gcattcttgt cttcagcatg
     2461 cacagcgatc cgatcatcgc cgcgcgcgcg cttgaggcgg gggcgaccgg ttacgtgctc
     2521 aaggactcag acgagctgat gaaggcgttc gaccaggtgc gcaccggcac cccgtacctc
     2581 agcaatgatc tcgccatgca ggttgccttg gtgcgcacag gcgtgcggcc aaatccgctc
     2641 gcccacctca ccccccgcga gttgcaaatc ttgtccttgt tggcggaagg caagccctat
     2701 ggccgcatcg ccgacgagct caatgtcagc tacaagaccg tggtcaacgc ctgctctcag
     2761 ctcaaacaaa agctcaatgc caagaacctg cccgagttaa tccgcgttgc ggtgcatctg
     2821 atctcggccg aaccataagg gtggcgatac acgggtgagg cgccactcga tcgtttcaag
     2881 cttccgtgcg gctgaagcgc aggaacgagc gccggttagt tcaggagtcg cgcgagggac
     2941 cgcccggctg cactcttgag ctccttggcg tcgaccgtgc cgtcattgtc agggttggcg
     3001 gccttgaagc gcttctccac gagcgcgaga aattcatttt tgtccagagt tccgtcgttg
     3061 tccgggtcgg ctgcggcaaa atccttggcg ttgacccggc cgcgcaattc ccgtttgtcg
     3121 agggtgccgt catgatcgcg atcgagcttg tcaaacacct tcgaggctgc actcttggct
     3181 tcggcaagat cgatcgtacc gtcattatcc ggatcgagcc ttttcagcag gctctgcgac
     3241 catgccggcg cggtggcgat cagcgtaagc gcaagagtcg tcactatgct ctttgctcgg
     3301 atgttcatgt tcgtgtcctc cgattcgaag gaaatacata atactccccg atcgctctcg
     3361 gcacccgtcc tgaaggtccc cttgtgagca ggtagccctg tgtccccggg gccacattgc
     3421 caaatgttcc cgacatgaat tggcaaaacg tcatgggacc cgcggcgggc gaatgtttca
     3481 gaatctgtga gaaattcgct gatcggtgcc atgcgtgggg cgggggaaca tggtcgaggg
     3541 gcgtcgcggc ttgcc
//
LOCUS       DATCWM010000456         2364 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_186888, whole genome shotgun sequence.
ACCESSION   DATCWM010000456 DATCWM010000000
VERSION     DATCWM010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2364)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2364)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2364
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186888"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..778)
                     /gene="groEL"
                     /locus_tag="VIQ50_08930"
     CDS             complement(<1..778)
                     /gene="groEL"
                     /locus_tag="VIQ50_08930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEY9360545.1"
                     /translation="MAAKEVRFSGDAREKMLRGVDTLANAVKVTLGPKGRNVVLDKSF
                     GAPRITKDGVTVAKEIELEDKFENMGAQMVREVAQKTNDLAGDGTTTATVLAQAIVKE
                     GAKSVAAGMNPMDLKRGIDIAVNAVVKDIEKRAKKVGSSAEVAQVGTLAANGDTKVGK
                     MIAEAMQKVGNEGVITVEEAKALDTEVEIVEGMQFDRGYLSPYFITNAEKMVAELEDA
                     FVLLHEKKLSGLQAMLPVLESIVQAGKPLLIVAEDVEGEAL"
     gene            complement(818..1114)
                     /locus_tag="VIQ50_08935"
     CDS             complement(818..1114)
                     /locus_tag="VIQ50_08935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HEY9360546.1"
                     /translation="MAKTKFRPLHDRVVVRRIDAEEKSKGGIIIPDTAKEKPSEGEVI
                     AVGPGGRDETGKIIKPDVKAGDRVLFGKWSGTEVKLDGEELLIMKESDIMGVIA"
     gene            1518..2057
                     /locus_tag="VIQ50_08940"
     CDS             1518..2057
                     /locus_tag="VIQ50_08940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360547.1"
                     /translation="MLNRSFGWSLLALSALAVSGCSTTPGPQVSASGPPEPEIPARVR
                     PTEIVGRWGYAAYHKPEDRTRTEANARGQCKQPYVIGQGTNGGVMMYLADSSELQELR
                     LKGSSAGRDYIGPAGRTPGPQDREIVSFDGRVMVLKYVDAEVDGRYGTGIFVRCAPRA
                     AQENAAAPRPAQANATSSR"
     gene            2156..>2364
                     /locus_tag="VIQ50_08945"
     CDS             2156..>2364
                     /locus_tag="VIQ50_08945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360548.1"
                     /translation="MSRRLLATPLAVWEREGVKAALIKAALPADDVNDPRVLLWRFET
                     VEGIPVGFGGLEVFGRDALLRSLVTL"
BASE COUNT          383 a          765 c          757 g          459 t
ORIGIN      
        1 cgagagcctc gccctcgacg tcttcggcaa cgatgagcag cggcttgccc gcctgcacga
       61 tcgactcgag cacgggcagc atcgcctgca ggccggagag cttcttctcg tgcaggagaa
      121 cgaaggcgtc ctccagctcg gccaccatct tctcggcatt ggtgatgaag tagggcgata
      181 gatagccgcg gtcgaactgc atgccttcga cgatctcgac ctcggtatcg agcgcctttg
      241 cctcctcgac cgtgatcacg ccttcattgc cgactttctg catggcctca gcgatcatct
      301 tgccgacctt ggtgtcgccg ttcgccgcga gcgtgccgac ttgggccacc tcggcggagg
      361 agccgacctt tttcgcgcgc ttctcgatgt ccttgaccac cgcgttcacc gcaatatcga
      421 tgccgcgctt gaggtccatc gggttcatcc cggccgccac cgacttggcg ccctccttga
      481 cgatcgcctg cgcgagcacg gttgcggtgg tggtgccatc gccggcgaga tcattggtct
      541 tctgcgccac ctcgcgcacc atctgcgcgc ccatgttctc gaacttgtcc tcgagctcga
      601 tttccttggc gacggtgacg ccgtccttgg tgatgcgggg cgcgccgaag ctcttgtcga
      661 gcacgacgtt gcggcccttg gggccgagtg tcaccttcac cgcattggcc aaggtgtcga
      721 cgccgcgcag catcttctcg cgcgcatcgc cggaaaagcg gacttctttc gcagccattt
      781 caagtcactc cattgcagtc tgatgattga gcggagatca ggcgatcacg cccatgatgt
      841 cggactcctt catgatcagg agttcctcgc cgtcgagctt gacctcggtg cccgaccact
      901 tgccgaacag tacccggtcg ccggccttga cgtcgggctt gatgatcttt ccggtttcgt
      961 cgcggccgcc ggggcccacc gcaatgacct cgccctccga cggcttctcc ttggcagtgt
     1021 caggaatgat gatgccgccc ttcgattttt cctcggcatc aatgcgtctc acgaccacgc
     1081 ggtcgtgcag gggacggaac ttggtcttgg ccatgggctc tcctcggggg aactgggacg
     1141 gcggtaagtg cttgaacgtt aatctcaatt tgtcggatta gcactccaga aagagagtgc
     1201 taaaggccag gcacagatag gggctcgcgc ggaggctgtc aaggaagccg aagtttgtcg
     1261 tgctgctcga cgccgaaggc tgcgggcggc aatgccgtgc gaaaacgcgg tcgattgctt
     1321 cactgtcgtc gagcggaggg gaacccaggt tgcctcacat ctgccttggg ggggccgtag
     1381 cttgacagca aagtcgcccg gatcgtcccg ccgagggcga ttccatgttg ttaaccctgc
     1441 ggccgataga aggtgttggg gtgggccgcg gttgcgtctc ggccggcgcg gcggacagga
     1501 ctaggggaaa atcgtcgatg ctgaatcgca gtttcggttg gtcactcctc gcattatcgg
     1561 cgctggcagt ctcgggctgc agcacaactc cgggtccgca ggtctctgcc tccgggcccc
     1621 cggaaccgga aatccctgcc cgcgtccggc ccaccgagat cgtcggccgg tggggatacg
     1681 ccgcctacca caagccggag gatcgcacgc gcaccgaggc caacgcccgc ggacagtgca
     1741 agcagcccta cgtgatcggc caaggcacca atggcggggt catgatgtat ctcgccgatt
     1801 ccagcgagct gcaggagttg cggctcaaag gcagcagcgc cggcagagat tacatcggcc
     1861 cggccggacg cacgcccggg ccgcaggacc gggagatcgt ttccttcgac ggccgcgtga
     1921 tggttctcaa atacgtcgat gccgaggtcg atgggcgcta cggcaccggc attttcgtgc
     1981 gctgcgcgcc gcgcgccgcg caggagaacg ccgcggcgcc gcggccggct caggcgaacg
     2041 ccacgtcgtc acgctgatca gtggccgctg atcgaagatt gaccgaacga aagccgcgca
     2101 ctgcaagcac tccgcgacgt gttcgtccgc gttcgcggtg cgacgagatg ccggcatgag
     2161 ccgccgcctc ctcgccacgc cgctcgccgt atgggaacgc gagggggtca aggctgcgct
     2221 catcaaggcc gccctgccgg ccgacgacgt gaatgacccg cgcgtattgc tctggcgctt
     2281 cgagacggtc gaagggattc cggtcgggtt cggcgggctc gaagttttcg gccgcgatgc
     2341 gctgttgcgc tcgctggtca cgct
//
LOCUS       DATCWM010000457         3030 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_327290, whole genome shotgun sequence.
ACCESSION   DATCWM010000457 DATCWM010000000
VERSION     DATCWM010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3030
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_327290"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..636
                     /locus_tag="VIQ50_08950"
     CDS             <1..636
                     /locus_tag="VIQ50_08950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope biogenesis protein TolA"
                     /protein_id="HEY9360549.1"
                     /translation="EKKEVKAAREPPPAPDSKPAESESAKKQAETPPDPIADALAREE
                     VKKPEPKKADAKPPTPPKKPAPPAPKFDPKQVAALLDKRESTRLAAAGETLNNAPSLG
                     LSNGTAAQLSLTELEALRARLAQLWTVPAGAKDPQELVVLIRVKLNPDGRLAAPPMVL
                     TSGNSPLFMAARDSAIRALFRGQPYDMLKPEHYEQWKDVEITFDPRDMIRG"
     gene            720..2015
                     /gene="tolB"
                     /locus_tag="VIQ50_08955"
     CDS             720..2015
                     /gene="tolB"
                     /locus_tag="VIQ50_08955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system beta propeller repeat protein
                     TolB"
                     /protein_id="HEY9360550.1"
                     /translation="MLGGAAGALASLSPRPAAAVLKLNVTEGNVQPVPIAIPDFVGVG
                     LHEPATARNVSEIIASNLRRSGLFAPIDQAAYIEKVSTIDTLPRFADWRQINAQALVT
                     GRITQTEGRLKAEFRLWDVFAGQQLRGEQYNTTADNWRRIAHIISDAIYERITGDKGY
                     FDTRIVFVDESGPKERRIKRLALMDQDGANVRYLTRGDDLVLTPRFSSAADTITYMSY
                     REGDPKVYLMNVETGQREIVSNFPGMTFSPRFSPDGQRVIFSLQRGGSSNLFVMDLRS
                     KATTRLTDTQVIDTAPSYSPDGTQISFESDRGGKQQIYVMAATGGPAQRISFGDGAYS
                     TPVWSPRGDYIAFTKQTESKFAIGIMRADGSGERILTEGYHNEGPTWAPNGRVIMFFR
                     DPGGNAGPMLYTVDVTGRNELILKTPSYASDPAWSPLLQ"
     gene            2231..2719
                     /gene="pal"
                     /locus_tag="VIQ50_08960"
     CDS             2231..2719
                     /gene="pal"
                     /locus_tag="VIQ50_08960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011504524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HEY9360551.1"
                     /translation="MTNVVVRVIRAAKLAGFLALALAASACANRPNDPQAGGSAPPGS
                     QQDFVVNVGDRVFFESDSSELTSQSIATLEKQAQWLQVYNQYTFTIEGHADERGTREY
                     NIALGARRAQTVRDYLASRGVQPQRMRTISYGKERPVAVCNDISCWSQNRRAVTVLNT
                     SS"
     gene            complement(2799..2960)
                     /locus_tag="VIQ50_08965"
     CDS             complement(2799..2960)
                     /locus_tag="VIQ50_08965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360552.1"
                     /translation="MRIDRLASAQLAACAVATALAAALCACGQENRYVAPPQVAVRDV
                     PPPKLRSRV"
BASE COUNT          573 a          998 c          976 g          483 t
ORIGIN      
        1 gaaaagaagg aagtcaaagc cgcgcgcgag ccgccgccgg cgccggactc caagcctgcc
       61 gaatccgaat ccgccaaaaa gcaggccgag acgccgcccg acccgatcgc cgacgcgctg
      121 gcgagggagg aagtaaagaa gccggagccg aaaaaggccg acgccaagcc gccgacgccg
      181 ccgaaaaagc ctgccccgcc ggcgcccaaa ttcgatccca aacaggtcgc ggcgctgctc
      241 gacaagcgcg agtcgacccg gctcgccgcc gccggcgaga cgctcaacaa cgcgccttcg
      301 ctcggcttgt cgaacggtac cgcggcgcag ttgtcgctga ccgagttgga ggctttgcgc
      361 gcgcggctcg cgcaattgtg gaccgtaccc gcgggagcga aggatccgca ggagttggtg
      421 gtgctgatca gggttaagct caacccggac ggcaggctgg cggcaccgcc gatggtgctg
      481 accagcggaa atagtccgct cttcatggct gcccgcgaca gcgccattcg cgcactgttt
      541 cgggggcagc cctacgacat gctcaagccc gagcattacg agcaatggaa agacgtcgag
      601 attaccttcg acccccgcga catgatccgg ggctagctgg cgcagtgggt gcgcaaggca
      661 tccgtgcgac gagcaatgcc gattcgacgg cgagcgcact gagccgccgt cgagtgatca
      721 tgctgggcgg agcggcgggc gcgctcgcga gcctttcgcc gcggccggcg gcggcggtgc
      781 tcaagctcaa cgtcaccgaa ggcaacgtcc agccggtgcc gattgcgatc ccggattttg
      841 tcggggtcgg actgcacgaa ccggcgacgg cgcgcaatgt gagcgagatc atcgcctcga
      901 acctgcgccg ctcgggcttg ttcgccccga tcgatcaggc cgcgtatatc gagaaggtct
      961 ccaccatcga cacgcttccc cgctttgccg attggcggca gatcaacgcc caggcactgg
     1021 tcaccggccg catcacccag accgagggcc ggctgaaggc cgagttcagg ctgtgggacg
     1081 tgttcgccgg ccagcagctg cgcggcgagc aatacaacac cacggccgac aattggcgtc
     1141 gcatcgctca catcatttcc gatgccatct acgagcggat caccggcgac aagggctact
     1201 tcgacacccg catcgtcttc gtcgacgagt ccggcccgaa ggagcggcgg atcaagcggt
     1261 tggcgctgat ggatcaggat ggcgccaatg tgcgctatct cacccgtggg gacgacctcg
     1321 tgctcacgcc gcggttctcc tcggctgccg acaccatcac ctacatgtcc taccgggagg
     1381 gcgatcccaa ggtctatctc atgaacgtcg agaccgggca gcgggagatc gtgagcaact
     1441 tcccgggcat gacgttcagt ccgcgtttct cacccgacgg ccagcgcgtg atcttcagtc
     1501 tgcaacgcgg cggcagttcc aacctgttcg tgatggacct gcgctcgaaa gcgaccacgc
     1561 gcttgaccga cacgcaggtc atcgacacgg cgccctccta ttcgcccgac gggacgcaaa
     1621 tcagtttcga gtccgatcgc gggggcaagc agcagattta cgtgatggcg gccacgggcg
     1681 ggccggcgca acgcatcagc ttcggcgacg gggcctattc gacgccggtg tggtcgccgc
     1741 gcggcgacta catcgccttc accaagcaga ccgagagcaa gttcgccatc ggcatcatgc
     1801 gagcggatgg atcaggcgag cgcatcctca ccgagggcta tcacaacgaa ggaccgactt
     1861 gggcgccgaa cgggcgcgtg atcatgttct tccgagatcc gggcggcaac gccgggccga
     1921 tgctctacac ggtcgatgtg accggccgca acgaactgat cttgaaaacg ccgagctacg
     1981 cgtccgatcc cgcgtggtcg ccgctgttgc aataaggcca tagcgaagga acggcgcgaa
     2041 tggaactcgc gaaggtctag aaggcgccgc attcaccggg cattaaccac cggagggggt
     2101 tttccgcttt ttccctgccg ttgagcgatc cgggcaacac ccgatcaagg tcgacaagaa
     2161 ccttcgctta accacgcacc tgttagacct gctgcatgtg cgctaacgac gcaaccatgg
     2221 aggcagcgga atgacgaatg tcgtcgtgcg cgtcatccgc gcggcaaagc ttgccgggtt
     2281 tttggctctg gcccttgccg cgtccgcttg cgcgaacaga ccgaacgatc cgcaggccgg
     2341 cggcagcgcg ccgcccggca gccaacagga tttcgtggtc aatgtcggcg atcgggtgtt
     2401 cttcgagtcc gattcgtccg aactcacgtc gcagtcgatc gccacgctgg agaagcaggc
     2461 gcaatggctg caggtctaca atcaatacac cttcaccatc gaaggccatg ccgacgaacg
     2521 cggcacgcgc gagtacaaca tcgcgctcgg cgctcggcgc gcgcagacgg tgcgcgatta
     2581 tctcgcttcg cgcggggttc agccgcagcg catgcgcacg atctcctacg gcaaggagcg
     2641 cccggtcgcg gtgtgcaacg acatttcttg ctggtcacag aatcgccgcg cggtgacggt
     2701 gctcaacacc agctcctgag cgcgagcaac acgggggaag gggacagccg gcgccttcgg
     2761 gcgccggctg tgttttgcaa tgctccaggc ttcccctttc aaacgcggga tcgtaacttc
     2821 ggcggcggga cgtcgcgcac cgcgacttgc ggcggcgcca cgtagcggtt ctcctgcccg
     2881 caggcgcaca gcgccgcggc gagcgcggtt gcgacggcgc aggcggcaag ctgcgcactc
     2941 gccagccgat cgatcctcat cgcgtgaccc tcagttgctc tcgtcgaggt tgccggcttg
     3001 ttgtgaaggg caccggcttc gcaggcgccg
//
LOCUS       DATCWM010000458         2523 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_273283, whole genome shotgun sequence.
ACCESSION   DATCWM010000458 DATCWM010000000
VERSION     DATCWM010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2523
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_273283"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..607
                     /locus_tag="VIQ50_08970"
     CDS             <1..607
                     /locus_tag="VIQ50_08970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008593485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Ldh family oxidoreductase"
                     /protein_id="HEY9360553.1"
                     /translation="VGNNPVAIALPSAGEFPAEADMALSATAMGKIRLAAAAGARIPG
                     DWAVDSEGRPTTDPAAAIKGMLLPAAGPKGFGLAFVIDLLCGGLSDGAVGAEVRPLYG
                     DPGEPYRCAHFFLAIDAGHFPPGERFAERVRDQAMRVSASKRGAGVERVYAPGELVWA
                     ARQASDGVCRLDAATVQSLRETAARVGVADLEASLLGAREA"
     gene            612..1349
                     /locus_tag="VIQ50_08975"
     CDS             612..1349
                     /locus_tag="VIQ50_08975"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY9360554.1"
                     /translation="MRARFEGEGDVIVVTGGAGGIGRALACAAAQAGARVVVCDIDEP
                     AMASLSEVSGISTRRLDVADRAGVFAGLGEVERRFGKIDGLVCAAAIQPRSPVHLMEA
                     AAWERVLRTNLDGVVWCYQAVVTGMIARRSGSIVAFTSGLAHQGWPGASAYAASKAAL
                     VAFAKSAAKEIAQHRVRFNLIAPGVIDTPQYRAANAGADDAHWRGSVGVGRPEDAIGP
                     LLFLLSDQATMTASIISRDIAYAAQER"
     gene            1352..>2523
                     /locus_tag="VIQ50_08980"
     CDS             1352..>2523
                     /locus_tag="VIQ50_08980"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEY9360555.1"
                     /translation="MRAIPPIIVVGAGPVGLTTSLGLDFYGLPFALFEEDAELSLDTK
                     AGTILTRTLEAFRRYGVADAVLAKALRVDEIGDVERATNTARPSVQTGLLSDDTRYPF
                     VINMPQHHLEPILRTAIEGRRPGALNLRHRLTSFRQTEHGVVARFDTPDGAREVEGSY
                     LLACDGGRSTVRAQLGVPVEGESPDERVLLVDVKVDLDVVNPRDYPYLAYFADPREWM
                     ILVRHPHCWRFLYPLAPGVAEPSAADFREKITAFIGPVEQLEILNTIVYRVHHRVATQ
                     WRERRVFLMGDAAHLITPTWALGLNTGILDAISLPWRLAWVARGWASDALLDGYAREQ
                     RPVAAEGSGEMARAARKYMAGEAASVKAMSGTAWANAATRTMLGVRLGVDEAGDWS"
BASE COUNT          365 a          833 c          904 g          421 t
ORIGIN      
        1 cgtcggcaac aatcccgtcg ccatcgcgct tccctcggcc ggcgagtttc cggcggaagc
       61 ggacatggcg ttgagcgcaa cggcgatggg caagatccgt ctcgccgcgg cggcgggagc
      121 acgcattccc ggggattggg cggtcgattc ggaaggacgg ccgacgaccg atcccgcggc
      181 tgccatcaag ggcatgctgt tgccggcggc gggtccgaaa ggattcgggc ttgcgttcgt
      241 catcgatctc ttgtgcggcg gcttgtcgga tggcgcggtc ggcgccgagg tgcgcccgct
      301 ctacggcgat cccggtgagc cctaccgctg cgcgcatttc tttctggcga tcgatgccgg
      361 gcacttcccc ccgggcgagc gctttgccga acgggtgcgg gaccaagcga tgcgcgtgag
      421 tgcctcgaaa cgcggtgcgg gagtggagcg cgtctatgcg ccgggggagc tcgtctgggc
      481 agcgcgccaa gcgagcgacg gcgtctgccg gctcgacgca gcgacggtgc aaagcctgcg
      541 cgagactgcc gcgcgcgtcg gagttgccga tttggaagcg tcgctgttgg gagcaagaga
      601 ggcttaatac catgcgggca cgcttcgagg gcgagggaga cgtgattgtg gtgaccggcg
      661 gcgcgggcgg catcggccgc gcgttggcct gcgcggccgc gcaagcaggc gcgcgcgtcg
      721 tcgtttgcga catcgatgag ccggccatgg cgtcgctgtc ggaggtttcc gggatttcga
      781 cccggcggct cgacgtcgcg gaccgcgccg gagtcttcgc cggtctcggc gaggtggaac
      841 gccggttcgg caagatcgac ggcctcgttt gcgcggcggc gattcagccg cgctcgcccg
      901 tgcatctgat ggaggcggcg gcctgggagc gcgtcttgcg caccaacctc gacggtgtcg
      961 tgtggtgcta tcaggcggtg gtaaccggca tgatcgcgcg gcggtccggg tcgatcgttg
     1021 cgttcacatc ggggcttgcg caccagggct ggcccggggc gtcggcttat gccgccagca
     1081 aggcggcgct ggttgcattc gccaaaagcg cggcaaagga gatcgcgcag catcgcgtgc
     1141 gcttcaatct tatcgcgccg ggcgtgatcg acacgccgca atatcgcgcc gccaacgccg
     1201 gcgcggacga cgcgcattgg cgcgggtcgg tcggggtcgg acggcccgag gacgcgatcg
     1261 gcccgctttt attcctgctg tccgatcagg cgacgatgac cgcttcgatc atcagccgcg
     1321 acatcgccta cgcggcgcag gagcgttgag cgtgcgtgcc atccctccca tcatcgtggt
     1381 cggcgccggc ccggtcggcc tgacgacgtc gctggggctc gatttctacg gcctgccgtt
     1441 cgcgctgttc gaagaggacg cggaactctc cctcgacacc aaggccggaa cgatcctgac
     1501 gcggacgctc gaggcctttc gccgctacgg cgtcgccgat gcagtgcttg ccaaggcgct
     1561 acgcgtcgac gagatcggcg acgtcgagcg cgccaccaat accgcgcggc catcggtgca
     1621 gacgggcctg ctcagcgacg acacgcgcta tccgttcgtc atcaacatgc cccagcatca
     1681 tctcgagccg atcctgcgca cggccatcga ggggcgccgg cccggtgcgc tcaacctgcg
     1741 gcaccggttg acctcgtttc ggcagacgga gcacggcgtc gtcgcccgtt tcgacacgcc
     1801 ggacggcgcg cgcgaggtcg agggctccta tctgctcgcc tgtgacggcg ggcgcagcac
     1861 ggtgcgcgcg cagctcggcg taccggtgga aggcgagtcg ccggacgaac gagtgctgct
     1921 ggtcgatgtc aaggtcgatc tcgacgtcgt caatccgcgc gactatccct atctcgccta
     1981 tttcgccgat ccgcgcgaat ggatgatcct ggtgcgccat ccacactgct ggcgctttct
     2041 ctatccgctc gctcccggcg ttgccgagcc cagcgccgcc gatttccgcg agaagatcac
     2101 cgctttcatc ggccccgtcg agcagctcga aatcctcaac accatcgtct accgcgttca
     2161 ccatcgcgtg gcgacgcagt ggcgcgagcg ccgcgtgttc ctcatgggcg atgccgcgca
     2221 tctgatcacg ccgacctggg cgctcggcct caataccgga attctcgatg cgatcagcct
     2281 gccgtggcgg ctggcctggg tggcgcgggg atgggcgagc gatgcgctcc tcgacggcta
     2341 cgcgcgcgag cagcggccgg tcgccgccga aggctccggc gagatggcgc gcgcggcgcg
     2401 caagtacatg gcgggagaag ccgccagcgt gaaggcgatg tcggggacgg cctgggccaa
     2461 cgccgccacc cgaaccatgc tgggcgtgag actcggcgtc gatgaggcgg gcgactggtc
     2521 cat
//
LOCUS       DATCWM010000459         3403 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_246427, whole genome shotgun sequence.
ACCESSION   DATCWM010000459 DATCWM010000000
VERSION     DATCWM010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3403
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_246427"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(86..1111)
                     /locus_tag="VIQ50_08985"
     CDS             complement(86..1111)
                     /locus_tag="VIQ50_08985"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018266947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HEY9360556.1"
                     /translation="MSDAGINIEADWQTGPDAVRRQGAALQAPLAELLRRVRRTPPNF
                     VLTCARGSSAHAATFGKHLLERHLGIPVGAFAPNVATIYRRRMTLAGQLFLTVSQSGR
                     SDDLIESVEMAKAAGALTAAIVNDGESPLAKASDIVLPMGAGPELSVAATKTFVTSLS
                     AWLHLAAAWADLDDLRAAIERLPDRLAAAMRLDWSAALQPLCDAKSLVSLGRGPTLAI
                     AREAALKLKETSNLHAEAFSSAEFHHGPIALVESSYPALLFVPTDQAAAGLRALAADL
                     RRKNANVFMTGEPEPGGLPALPPDHPDADAVCLIQTFYALAIRLAQSRGINVDLPRHL
                     QKITRTR"
     gene            complement(1108..2025)
                     /locus_tag="VIQ50_08990"
     CDS             complement(1108..2025)
                     /locus_tag="VIQ50_08990"
                     /inference="COORDINATES: protein motif:HMM:NF013986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BadF/BadG/BcrA/BcrD ATPase family protein"
                     /protein_id="HEY9360557.1"
                     /translation="MNGPADVLLLGVDGGGSGCRARLCTISGRTLSEGTAGSANIRLG
                     VEQSFASVHEATVQCMSAAGLSTRDFDRIVACLALAGASEPSQLEAARQHEHPYRRAV
                     FVTDAQAACVGAHGGADGGIVVIGTGSIGWAQLNGRQHRVGGWGWPISDEASGAWLGC
                     EALRRTLWACDGRVTWTPLLRSLLAKFRSDPHAIVDWMTGALPKDFATFAPEIIEHAA
                     ADDPVAVELLQVAGAHVDALAQALVRLGADRLSLVGGLAASIEPWLAKATRRHLVAPR
                     GDAVAGALQLARDAAESLHRDLTASRSSR"
     gene            2112..3035
                     /locus_tag="VIQ50_08995"
     CDS             2112..3035
                     /locus_tag="VIQ50_08995"
                     /EC_number="4.2.1.126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016835 - carbon-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046348 - amino sugar catabolic process
                     [Evidence IEA];
                     GO_process: GO:0097173 - N-acetylmuramic acid catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HEY9360558.1"
                     /translation="MDTERASPRYSDIDAWAPFDIAEALIEGQFTAVAAVRAARFALL
                     EAAVAAAERLRGPGRLVYVGAGTSGRLAVQDGAELVPTFSWPQERLLLLIAGGRNALL
                     RSVEGAEDAVDQAHRLAEQHEIGADDVVIAVAASGTTPFTLSCLNEAKRRGALTIGVA
                     NNRDTPILNGADHAIWLDTGAEPIAGSTRMKAGTAQRITLNVLSSLVMILLGRVYDGL
                     MVDLQAVNQKLVRRSESILTRLTGSSGEQAREALHRANGNVKLAVLLLHGCELNEATA
                     VLDRAGGQLRAALADIGKPAPEPADFSDLTT"
     gene            complement(3044..3253)
                     /locus_tag="VIQ50_09000"
     CDS             complement(3044..3253)
                     /locus_tag="VIQ50_09000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360559.1"
                     /translation="MAQVITRCRLTGHYMFMGMNADPKEFKQSAGAFARKFCPFCSCE
                     HFWYKEDSKFLAAASELGPGVRQAG"
BASE COUNT          586 a         1137 c         1125 g          555 t
ORIGIN      
        1 ccatcgatga ccacggcggt gcgctcgcgc acagccgcgc cgtcgaaaac gtggtccgcc
       61 gcgatggcgt gcagccccag cctgttcatc tggtgcgcgt gatcttttgc aagtgccgcg
      121 gcaggtcgac gttgatgcct cggctttggg cgaggcgaat cgccaacgcg tagaaggtct
      181 ggatcaggca caccgcatcg gcgtcagggt gatccggagg aagcgccggc aaacctccgg
      241 gctccggctc gccggtcatg aagacgttgg cgttcttgcg gcgaagatcc gcggcgagcg
      301 cgcgcagccc ggctgcggcc tgatccgtcg gtacgaacaa gagcgcagga taagacgact
      361 ccacaagcgc gatcggacca tgatggaatt cggcgctgct gaacgcttcg gcatgaaggt
      421 tcgaagtttc cttcagcttc aaggcggcct ctcgcgcaat cgcgagggtg ggaccgcgcc
      481 ccaggctcac caggctcttc gcgtcgcaca gcggctgcaa ggccgcgctc caatcgagcc
      541 gcatggcggc cgcgaggcga tccggcaatc gctcgattgc cgcgcgcaag tcatcgaggt
      601 ccgcccatgc ggcggcgaga tgaagccagg cggagaggct ggtcacgaag gtcttcgtgg
      661 ccgccacgct gagctccggc cctgcgccca tcggcagcac gatgtcggat gccttcgcca
      721 gggggctctc gccgtcattg acgatggccg cggtgagcgc gccggcggcc ttggccatct
      781 caaccgactc gatcaggtcg tcgcttcgtc cggattgtga aaccgtgagg aagagctggc
      841 ccgcaagtgt catccgccgc cggtagatgg tcgctacgtt gggtgcaaac gcgcccaccg
      901 ggatgccgag atggcgctcc agcagatgct ttccgaacgt cgccgcatgg gccgagcttc
      961 cgcgcgcgca ggtcaggacg aagttcggcg gcgtgcgcct gacccgacgc aggagctccg
     1021 ccaacggagc ttgcagcgcg gctccttgcc gccgcacggc gtcgggaccg gtttgccagt
     1081 ccgcttcgat gttgatgccg gcgtcgctca ccgggaagac ctcgaagcgg tgaggtcgcg
     1141 gtgcaaggac tctgccgcgt cacgggccaa ttgcagcgca cccgcgaccg cgtcgccgcg
     1201 gggcgcgacg aggtggcgac gcgtcgcctt cgccagccat ggctcgatcg atgcggcaag
     1261 gccgccgacc agggacaggc gatcggcccc gagacgtacg agcgcttgcg ccagggcgtc
     1321 gacgtgggcg ccggcaacct gcaacagctc gaccgcgacc ggatcgtcgg ccgcagcatg
     1381 ctcgatgatc tccggcgcga aggtcgcgaa atccttcggc aatgcgccgg tcatccaatc
     1441 gacgatggcg tgcgggtccg agcgaaattt tgccagcagc gaacgcagga gcggcgtcca
     1501 tgtcacgcgc ccgtcgcagg cccacaacgt gcggcgcagc gcctcgcagc cgagccaggc
     1561 gccgcttgct tcatcggaga tgggccaacc ccagccgccc acccgatgct gccgcccatt
     1621 gagctgggcc cagccgatgc tgccggtgcc gatcacgacg atgccgccgt cggctccgcc
     1681 gtgggcaccg acgcaggcgg cctgggcatc ggtgacgaaa accgccctgc ggtaggggtg
     1741 ctcatgctgg cgtgccgcct cgagctggct cggctcgctg gcccccgcca atgccaagca
     1801 ggcaacgatt cgatcgaagt cacgcgtcga cagtcctgcg gcgctcatgc attgaaccgt
     1861 ggcctcatgc accgaggcaa agctttgctc cactcccagg cgaatattgg ccgacccggc
     1921 ggtcccttcg cttagcgtgc ggcccgagat cgtgcaaagg cgggcgcgac atccgctgcc
     1981 gcccccgtcg acgccgagca agaggacgtc tgcgggcccg ttcattttcg attgctcctc
     2041 ggcctgcaaa tgcgcgagaa ccaattagga tcgacaagcg ttcttttgcg tgtcagcatt
     2101 ccgcgtgaat catggatacc gaacgcgcga gcccccgata ttccgatatc gatgcgtggg
     2161 cgccctttga catcgccgag gcgctgatcg agggccagtt cacggcggtg gccgcggtca
     2221 gggccgcccg cttcgcactt ctggaggcgg ccgtcgccgc cgcggagaga ttgcgcgggc
     2281 ccggccgcct cgtctatgtc ggcgccggca cctccggccg actcgccgtc caggacgggg
     2341 cggagctcgt tccgactttc agttggcccc aggagcgcct gttgctgctc attgcgggag
     2401 gcaggaacgc gctgctgcgg tcggtcgaag gggccgagga cgcggtcgat caagctcacc
     2461 gccttgccga acagcatgaa atcggcgccg atgacgtcgt cattgccgtc gccgcgagcg
     2521 gtaccacgcc cttcaccctc tcctgcctca atgaagcaaa gcgacgcggc gctttgacga
     2581 tcggtgttgc aaacaaccgc gacactccga tcctgaacgg ggccgaccac gcgatctggc
     2641 tggacaccgg cgccgagccg atcgccgggt ccacccgaat gaaggccgga acggcgcagc
     2701 gtatcacgct caacgtcttg tcgtccctgg tcatgatctt gctagggcgc gtgtatgacg
     2761 gactgatggt cgacctccag gccgtcaatc aaaagctcgt gcgacgcagc gaatcgatcc
     2821 tcacccggct caccggcagc agcggcgagc aggcgcgcga ggcattgcat cgtgcaaacg
     2881 gcaacgtcaa gctggcggtg ctgcttctgc acggctgtga gctgaacgag gccaccgccg
     2941 ttctcgatcg cgccggcggg cagctgcgcg ccgcgctcgc cgacatcggc aagcccgctc
     3001 cggagcccgc cgatttcagc gatctgacga cgtgatgcgg tgatcagccg gcttgccgga
     3061 cgccgggccc aagctcggat gcggcagcca gaaatttcga atcttctttg taccagaagt
     3121 gttcgcagga gcagaacggg caaaatttgc gtgcgaaagc accggccgat tgtttgaatt
     3181 ctttgggatc agcattcatg cccatgaaca tatagtggcc ggtgagccgg cagcgtgtga
     3241 tgacctgagc catcgagcta ctccgtccta aacaagacgc cgatgagaca acatcgccgc
     3301 ccagggaagg ttccgcgccg gcgcgacgcc tcccgttcgc gcggtgtcac gtgatccgtt
     3361 cacatcgagc cacaaatcgg cgtcatggcg ggattgtcac cgc
//
LOCUS       DATCWM010000460         2112 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_537651, whole genome shotgun sequence.
ACCESSION   DATCWM010000460 DATCWM010000000
VERSION     DATCWM010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2112
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_537651"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..803)
                     /locus_tag="VIQ50_09005"
     CDS             complement(<1..803)
                     /locus_tag="VIQ50_09005"
                     /EC_number="6.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobaltochelatase subunit CobN"
                     /protein_id="HEY9360560.1"
                     /translation="MHLLQTTSATLDDIVEPRDLGQTPGDIVVLSFADSDLFGLASAY
                     AAEKKNLPSLRLAHLRDLRHPMSIDLWIDKCARHAKVIVVRLLGGLDWWRYGVDALSA
                     MARERDITLAVLPGDDRDDKRLDEASTLAPGELAALLAYFREAGRENLRALLRRLATY
                     AGYSFPAQVPRALPRMGGYLPGTGAVSLDQLCAASGRAVVPILFYRALLAADTAPIDS
                     LCGALAARGLAPAPLFVPSLKDSEASAFVRDALQRLAPAVVVTTTAFAAG"
     gene            complement(807..1841)
                     /gene="cobW"
                     /locus_tag="VIQ50_09010"
     CDS             complement(807..1841)
                     /gene="cobW"
                     /locus_tag="VIQ50_09010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006203259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin biosynthesis protein CobW"
                     /protein_id="HEY9360561.1"
                     /translation="MTSLARVPCTIVTGFLGSGKTTLIRHVLANANGRRLAVIVNEFG
                     DVGIDGEILKGCGNAACPEENIVELANGCLCCTVADEFVPALDQILAREPAVEHIVIE
                     TSGLALPKPLVQAFHWPAIKSRVTVDGVVAVVDGAALADGQVAADLDALKRQRAADAA
                     LDHDDPIEEVFGDQIACADLVVLNKRDLLDDAGMEKAVAMVSGALPRAVRVVTVADGK
                     VDPAALLGLGVGTEDDIENRKTLHDDELEHDHDDFESFVVDMGEVGDPASAANRIAAV
                     AEAHNILRMKGFLAVTGKPMRLLIQAVGPRVSHYYDKPWGGSEPRQGSLVVIGLKGLD
                     RVAVVKSLAG"
     gene            complement(1838..>2112)
                     /locus_tag="VIQ50_09015"
     CDS             complement(1838..>2112)
                     /locus_tag="VIQ50_09015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008836450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1636 family protein"
                     /protein_id="HEY9360562.1"
                     /translation="AAEGTGVTVRQVHCLANCNRALSAAIRCDGTWAYVFGGLEAESD
                     AAALIEGARLLARAEDGIMPWRGRPEVLKRGLIARVPPLDFVEDNE"
BASE COUNT          396 a          682 c          697 g          337 t
ORIGIN      
        1 ccggcagcaa aggctgtggt ggtgaccacc accgcggggg cgagacgttg caacgcgtcc
       61 cgcacgaatg cgctggcttc agaatccttt aggctgggaa cgaagagtgg cgccggagcg
      121 agtccgcgcg cggcgagcgc gccgcaaagt gaatcgattg gcgcagtgtc ggcggcgagc
      181 agcgcgcggt agaacaggat cggaacgacg gctcgcccag acgccgcgca aagttgatcg
      241 agagagaccg cgccggtgcc cggcagataa ccacccatgc gtgggagggc tcgcggcact
      301 tgagccggga atgaatagcc tgcataggta gcgaggcggc gaagcaaagc ccgcaaattc
      361 tcccgcccgg cttcgcggaa ataagcgaga agcgccgcaa gttcgccagg cgccaacgtc
      421 gaggcctcat cgaggcgctt gtcgtcgcga tcgtcgccgg gaaggacagc aagcgtgatg
      481 tcgcgttcgc gcgccatggc agagagcgca tcgactccgt agcgccacca gtcgagtccg
      541 ccgagcagcc gcaccacgat caccttggcg tgccgcgcgc atttgtcgat ccagagatcg
      601 atcgacatcg gatggcgcag gtcgcgcaga tgcgcgagcc tcaggctcgg gaggttcttc
      661 ttctcggccg catacgcaga ggcaagcccg aaaagatcgc tgtcggcgaa ggacagaacg
      721 acgatgtcgc ccggcgtctg accgaggtcg cgcggttcga cgatgtcgtc gagggttgct
      781 gacgtggttt ggaggagatg catggcctag cctgcgagag atttcaccac cgcgacacgg
      841 tcgaggcctt tcaggccgat caccacgagg ctcccctggc gcggctcaga cccgccccac
      901 ggcttgtcgt aatagtggct gacgcggggg ccgaccgcct ggatcaagag ccgcatcggc
      961 ttcccggtga cagccaaaaa gcccttcatc cgcaagatgt tatgggcttc ggcaaccgcg
     1021 gcgatgcggt tcgcggcaga ggcaggatcg ccgacctcac ccatgtccac gacgaagctt
     1081 tcgaagtcat cgtggtcgtg ctccaattcg tcgtcgtgga gcgtcttgcg gttctcgatg
     1141 tcgtcctcgg tgccgacgcc caagccgaga agcgcagctg gatcgacctt gccgtctgcg
     1201 accgtcacca ctctcactgc gcggggcagc gcgccggaca ccatcgccac cgccttctcc
     1261 atgccggcgt catcgagcag gtcgcgcttg ttgagcacaa cgagatcggc gcacgcgatc
     1321 tgatctccga acacctcctc gatcgggtcg tcatggtcga gagcggcgtc tgccgcgcgc
     1381 tggcgcttga gcgcgtcgag atctgcggca acctggccgt cagcgagggc tgcgccatcg
     1441 accaccgcca ccacgccgtc gacggtgacg cggcttttga tcgcgggcca atggaaggcc
     1501 tggaccaggg gcttgggcag agcaaggccg gacgtttcga tcacgatgtg ctcgaccgct
     1561 ggctcacgcg cgagaatctg atcgagagca ggcacaaact cgtcggccac agtgcagcac
     1621 aggcagccat tggcgagctc gacgatgttc tcctctgggc aggcggcatt accgcagcct
     1681 ttgagaatct cgccatcgat gccgacatcg ccgaactcgt tgacaatgac ggcaagcctc
     1741 cgcccgttgg cattggcgag cacgtggcgg atcagagtcg tcttgcccga gccgagaaag
     1801 ccggtgacga tggtgcaggg aacgcgggca agcgacgtca ttcattgtcc tccacgaaat
     1861 cgagcggcgg cacgcgcgcg atcagcccgc gcttcagaac ttcgggccgg ccgcgccacg
     1921 gcatgatgcc atcttcggcg cgcgccagca ggcgtgcgcc ttcgatcagc gcagcggcat
     1981 cgctctcagc ctcgagcccg ccgaacacgt aggcccacgt accgtcgcat ctgatcgccg
     2041 cgctcaaggc acgattgcaa ttggcaaggc agtggacctg gcgcaccgtg acgccggttc
     2101 cttcggcggc gc
//
LOCUS       DATCWM010000461         2889 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_35690, whole genome shotgun sequence.
ACCESSION   DATCWM010000461 DATCWM010000000
VERSION     DATCWM010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2889)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2889)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2889
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35690"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1127
                     /gene="glp"
                     /locus_tag="VIQ50_09020"
     CDS             <1..1127
                     /gene="glp"
                     /locus_tag="VIQ50_09020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990586 - divisome complex [Evidence
                     IEA];
                     GO_function: GO:0061599 - molybdopterin molybdotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="gephyrin-like molybdotransferase Glp"
                     /protein_id="HEY9360563.1"
                     /translation="AHGRVLAADLAALRTQPPADVSAMDGYAVHSQDVASTPVRLKLV
                     GEVAAGHPFEGSVGRGEAARIFTGGVLPPGTDTIVIQENTVREGDAVLVNAASGKGKH
                     VRVEGLDFKRGAVLLAKGRRLRDRDLALAAAMNYPTVPVHRRPKVALLATGDELVMPG
                     GTPGFGQIVYSNGYATRALARREGSEVVDLGIAPDRLAETAAGVRRARELGADILVTS
                     GGASVGEYDLVREALAAEGLALSFWKVALRPGRPMMHGRLGAMHVLGLPGNPVSAYVC
                     AVLFLVPLIRQLCGRVDVAPALETARLGCDLPRNDERADYLRAVLTAGPDGTPVAMPA
                     PVQDSSMLMPLAQADCLLVREPFAPAAKAGERCAIIRLAA"
     gene            1366..2067
                     /gene="lexA"
                     /locus_tag="VIQ50_09025"
     CDS             1366..2067
                     /gene="lexA"
                     /locus_tag="VIQ50_09025"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HEY9360564.1"
                     /translation="MLTRKQFELLRFVHERLKETGVPPSFDEMKDALDLRSKSGIHRL
                     ITALEERGFIRRLPNRARAIEVIKLPESVAHGIGTGRARGFTPSVIEGNLGRVRAASE
                     DEGGRPVAVPVMGRIAAGTPVEAIQTKSHVINMPPDLLSSGEHFALEVRGDSMIEAGI
                     LDGDIALLKKTEGADTGDIVVALIDEEEATLKRFRRRGASIALEPANAAYEVRILPPN
                     RVRIQGKLVGLFRRY"
     gene            2346..2528
                     /locus_tag="VIQ50_09030"
     CDS             2346..2528
                     /locus_tag="VIQ50_09030"
                     /inference="COORDINATES: protein motif:HMM:NF023665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3606 domain-containing protein"
                     /protein_id="HEY9360565.1"
                     /translation="MPDDLTNKGPQDRSRISLLEPHEVQYWADKFDVSKERLSEAVRN
                     VGHSAAAVERELKRLA"
     gene            complement(2554..>2889)
                     /locus_tag="VIQ50_09035"
     CDS             complement(2554..>2889)
                     /locus_tag="VIQ50_09035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein ComEC"
                     /protein_id="HEY9360566.1"
                     /translation="KLRDGSLIAIAKTVEAFEEDCRRAVLVVSVRDAPPGCAAVVIDR
                     NVWRRSGAMALRRRGEEFEITATRSPGYDRPWARAVTGQEQATVPGGTMPARPRDATP
                     RTDDLDAGD"
BASE COUNT          486 a          947 c          956 g          500 t
ORIGIN      
        1 acgcccacgg ccgggtgctc gccgccgatc tcgcggcact gcgtacccaa ccgccggccg
       61 atgtttcggc gatggacggc tacgccgtgc attcgcagga cgtggccagc acgccagtca
      121 gactgaagct cgtcggcgag gtcgcagccg gacatccgtt cgaaggctcg gtcgggcgcg
      181 gggaagccgc gcgcatcttc accggcggcg tcctgccgcc cggcaccgac acaatcgtga
      241 ttcaggagaa cacggtgcgc gagggtgacg ccgtgctcgt caatgcggca tccggcaagg
      301 gcaagcatgt ccgggtcgag gggctcgact tcaagcgggg cgcggtgctg ctcgccaagg
      361 gccgtcgcct cagggaccgc gatctcgcgc tcgccgcggc catgaactat ccgacggttc
      421 cggtacatcg caggcccaaa gtcgcgctgc tggcaaccgg ggacgaattg gtcatgcccg
      481 gcggcacgcc cggtttcggc cagatcgttt attcgaatgg ttatgccact agggcgctgg
      541 cgcgccgcga aggcagcgag gtggtcgatc tcggcatcgc gcccgatcgc cttgccgaga
      601 ccgccgctgg ggtgcggcgc gcgcgcgaac tcggcgccga tatcctcgtc acctctggcg
      661 gcgcctcggt cggtgagtac gatctcgtgc gcgaggcgct cgcggcggag ggactggcgc
      721 tctcgttctg gaaggtggcg ctgcgtccgg gccggccgat gatgcacggc cggctgggcg
      781 ccatgcacgt tctcggtctg cccgggaatc cggtctcggc ctatgtctgc gcggtgctgt
      841 ttctggttcc gttgattcgt caactctgcg gtcgggtcga cgtcgcgccg gcgctcgaga
      901 ccgcgcgtct gggttgcgat ctaccgcgaa acgatgagcg cgcggactat ctgcgcgccg
      961 tgctgacggc cgggcccgat ggcactcctg tcgcgatgcc ggcgccggtg caggatagtt
     1021 ccatgctgat gccactcgcg caggccgatt gccttctcgt gcgcgagccc tttgcccctg
     1081 ccgccaaggc gggagagcgg tgcgcaatca tcagacttgc ggcgtaagta cccatcacga
     1141 gtcgcctgac tagttcaacg gccgatgact agttcaacgg cggaccgaat cgcactgagt
     1201 catcggccgc gccgatccgg ctgagggggt cgggcctccg cgaatgaccc gcgccgccat
     1261 tcactcgaaa ttaaagggtt gcggaacaca tatcgaacat atagtgtctg ttcatgattt
     1321 gtttcaacga gtcccttcgg ggccgcggga atggggaatg cagatatgtt gacgcgaaaa
     1381 cagttcgaac tgctccgctt cgtccatgag cgactgaagg agaccggggt gccgccctcc
     1441 ttcgatgaga tgaaggatgc gctcgacctg cgttcgaagt ctgggatcca ccgcctcatc
     1501 acggcgctgg aggagcgcgg cttcatccgc cgcctcccca atcgtgcccg tgccatcgag
     1561 gtgatcaagt tacccgaatc ggtcgcgcac gggatcggca cgggtcgtgc ccgcggattc
     1621 acaccgagcg tgatcgaggg caatctcggc cgggtgcgag ctgcatcgga ggacgaaggc
     1681 ggccgccccg tcgcggtgcc ggtaatggga cgcattgccg ccggcacgcc ggtcgaggcg
     1741 atccaaacga agagccacgt catcaacatg ccgcccgatc tgctgtcgag cggcgagcac
     1801 ttcgccctcg aagtccgcgg cgacagcatg atcgaggccg gcatcctcga tggcgacatt
     1861 gcgctcctca agaagacgga aggggccgat accggcgaca tcgtggtggc gctgatcgat
     1921 gaggaggagg ccacgctcaa gcgtttccgc cgccgcgggg cctcgattgc actcgagcct
     1981 gccaatgctg cctatgaggt gagaatcctt ccgcccaatc gcgtccgcat ccaaggcaag
     2041 ctcgtcggat tgttccggcg gtattgaacg gcatcgtccc accgttgagg ggatgcccgc
     2101 ctcagtctcc aggctcgagg tcgtctgcgc gcggcgtcgc atcgcgttgg ccgccgcgtg
     2161 gcgcggggcc cggcaccgac acctgctcct gcccccaaca gcgcagatgg caagtcctgg
     2221 ccgtcaattt tcgactcccc ggcggtcggg cgcttaaaag acgaaggtgc ggccgattat
     2281 gcgcccttgt cggctcggaa ctgctctcag atgaccgcgt tgaacctcaa atcggagaga
     2341 acaggatgcc cgacgatctc acgaacaaag gtccgcaaga ccgaagccga atcagtctgt
     2401 tggagccgca tgaagtccag tactgggccg acaaattcga tgtatcgaag gagcggctct
     2461 ctgaagcagt aaggaacgtc gggcactccg ctgctgccgt ggagagagaa ctcaaaagat
     2521 tggcctaggc acgccgttca ggggacgccc gcctcagtct cccgcatcga ggtcgtctgt
     2581 gcgcggcgtc gcatcgcgtg gccgcgccgg cattgtgccg cccggcacgg tcgcctgctc
     2641 ctgccccgta accgcccgcg cccatggccg gtcgtacccc ggtgaccgtg tggcggtgat
     2701 ctcaaattct tctccacggc ggcgcagcgc catcgccccg gagcgtcgcc agacgtttcg
     2761 gtcgatcacg acagcggcac atccgggcgg cgcatcgcgc acgctcacca ccaacacagc
     2821 gcggcggcaa tcctcctcaa aggcttcgac cgtcttggcg atggcgatga gcgagccgtc
     2881 gcgcagctt
//
LOCUS       DATCWM010000462         3268 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_57191, whole genome shotgun sequence.
ACCESSION   DATCWM010000462 DATCWM010000000
VERSION     DATCWM010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3268)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3268)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3268
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57191"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            161..379
                     /locus_tag="VIQ50_09040"
     CDS             161..379
                     /locus_tag="VIQ50_09040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360567.1"
                     /translation="MTNAVQVVDQNEVNDLDRAAAASVPAESSWLTYLLLILGIALAA
                     ASAFWFVFRTASRFPRRAAHPRMHMSNS"
     gene            complement(502..1416)
                     /locus_tag="VIQ50_09045"
     CDS             complement(502..1416)
                     /locus_tag="VIQ50_09045"
                     /EC_number="4.2.2.n1"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEY9360568.1"
                     /translation="MHGLVASALFSVMLFVATLVLGLPSQLIGQASAGEGDQVAPVEA
                     TQAPSATPSNRAASVASICDALAAAAAENDLPVDFFARLIWQESRFDPTAVSRAGAQG
                     VAQFMPATANARGLANPFDPIEAIAHSAKLLRDLRRELGNLGLAAAAYNAGSRRVRDW
                     LAGRRGLPRETDAYVRIVTGQPPEQWARVQAGHAEMHFAHPVPCPQIASLVARSPAPV
                     MKPLDPWGVQLVGSSSDATALAAYHQLQGKYGSILGGREPRVLHHGLARGSMGCARVH
                     VGTETRASAEKLCTELRAAGASCTVLRN"
     gene            1676..>3268
                     /locus_tag="VIQ50_09050"
     CDS             1676..>3268
                     /locus_tag="VIQ50_09050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY9360569.1"
                     /translation="MPTSPSIMDTRRDQMFPVLEPFEIERVRRFGKVRSYDDGATLAK
                     VGEVGPGLTIILAGQVEIVRRDELGHRTPIVTYGPGSFMGELAQLAGRPALIDAHARG
                     PVEALIISPDRLRALLIAEAELGERIMRALILRRMGLLETGAGGPVIVGRPGNGDVLR
                     LEGFLRRNGHPRQTLDPDTDAEAKALIERFHIDPGQLPIVLCAGGQLLRNPTEGELAR
                     CIGLVRPIDPRRVYDVAIVGAGPAGLAAAVYAGSEGLSVLVLDCRAFGGQAGASARIE
                     NYLGFPTGITGMALMARAYNQAQKFGVEMAVPDEVAGLEAEDDFAPRRVVLRLSNNER
                     VSARSLVIASGARYRRLSIPNLEGFEGASVHYWASPLEAKLCAGQEVALVGGGNSAGQ
                     AAVYLANQAAKVWLLVRGDDLAASMSRYLVDRIRGLTNVEVLARTSVTGLEGRDGMLE
                     AIRWRRGASGEEVRRRIQHLFLFIGAEPNTDWLAGSGIALDAKGFVLTGADTKEKLRP
                     LETSREGVFAIGDVRSGSIKRVA"
BASE COUNT          574 a         1009 c         1106 g          579 t
ORIGIN      
        1 tcaatctctc ggtgccgcaa gccggggcga aagtccggtt gcagccgcgg ggacggcttg
       61 gccagctctc ccaatgaccg agggcgccgg cgcgccagca agcacaaacg ccagggaagc
      121 cgccacgacg aatgcagtga cagctgcagc aacagatgcg gtgaccaatg cagtgcaagt
      181 ggtcgatcag aacgaggtca acgatctcga tcgcgccgct gccgccagcg ttccggccga
      241 gtcgtcctgg cttacctatc tgctgttgat cctgggcatc gcgctcgccg cggcatcggc
      301 attctggttc gttttcagaa cggcatcccg gttcccgcgc cgagcggcac atccgcgcat
      361 gcacatgagc aactcgtgac gtgaggcccg gcgctcggcc tcgagcgccc aaggcgttgc
      421 gactactcgc cggcgaagcg gtccaatgac gggccggcca tgtcggccgg gcggcgacgt
      481 gggcgttcgc ggagcaagac tttaattgcg gagcaccgtg cagctcgcgc cggcggcgcg
      541 cagctcggtg cacaatttct cggcactggc acgggtctcc gtcccgacgt ggactcgcgc
      601 acaacccatg ctgccgcgcg cgagcccgtg gtgcaggacg cgtggctccc gcccgcccag
      661 gatggatccg tacttcccct gaagttgatg atacgcggcg agcgccgtcg cgtctgacga
      721 gcttccgacc aattgcacgc cccaaggatc cagcggcttc atgacgggtg ccggcgagcg
      781 agcgacaagg ctagcgattt gcggacaggg cacggggtgc gcgaagtgca tctcggcatg
      841 gcccgcctga acccgagccc attgctcggg gggttgcccc gttacgatcc tcacatacgc
      901 gtcggtctcc cgcggtaaac cacgccggcc agccagccag tcgcgaaccc gccgcgatcc
      961 cgcattgtag gccgccgccg cgagcccgag atttccgagt tcgcgccgca ggtcgcgcaa
     1021 aagctttgcg gagtgggcga ttgcttcgat tggatcaaag gggttggcaa ggccgcgcgc
     1081 gttcgcggtc gcgggcatga actgcgccac gccttgcgcg cctgcgcgac tgaccgccgt
     1141 cggatcgaag cggctctcct gccagatcag ccgggcgaag aaatcgaccg gcagatcgtt
     1201 ttctgccgca gccgccgcaa gcgcatcaca gatgctcgcg acggaggccg cacggtttga
     1261 tggggtcgcg gagggtgctt gggttgcttc aaccggagcg acttgatcgc cctcaccggc
     1321 gctcgcttgc ccgatgagtt ggctcggcag ccccagcacg agcgtagcga caaacaacat
     1381 gaccgagaag agagcggatg cgacaaggcc atgcatgcgc gtctccgggg agtgcgcggc
     1441 gccgccgagc aagctgcgga tgcccaagcc gacgatacgc ctgacgcttt gaggggtgtc
     1501 tcgggcccct caagtccggt caggccccta atccttctcc gaaccgaact tatcgaatga
     1561 cagtctgttt tgccacggcg cagagctcgc aagtggcgct cagcgacgta ccccgcaaca
     1621 atatggcgta cggtcagatc atgcttagtt aagctcatcg ggaggatgca cgctcatgcc
     1681 gacctcgcca tcgatcatgg acactcgacg ggaccagatg ttcccggtgc tcgagccgtt
     1741 cgagattgag cgcgtccgtc gattcggcaa ggtgcggtcg tatgatgacg gggcgacgtt
     1801 ggcgaaagtc ggcgaagtcg gtccgggact aactattatc ctggccgggc aggtcgagat
     1861 cgtcagacgc gacgagttgg gccaccgcac gccgattgtg acgtacggcc cggggtcgtt
     1921 catgggggag cttgctcaac tcgccggccg gccagctctc attgatgccc acgcgcgggg
     1981 accggtcgag gccctgatca tctccccgga tcgattgcgc gcgttactga tcgccgaggc
     2041 ggagttgggc gagcggatca tgcgcgcctt gatactgcgt cgcatggggc tgctcgagac
     2101 gggagctggc ggaccggtga tcgtcggccg tcctggaaac ggcgatgtgc ttcggctcga
     2161 aggttttctc cgtcgcaacg gccatccgcg gcaaacgctt gaccccgaca ccgacgcgga
     2221 agcgaaggca ttgattgaac gttttcacat cgatcccggt caattaccga tagtcttgtg
     2281 tgcgggggga cagttgctac gcaatcccac cgaaggtgag cttgcccgct gtatcgggct
     2341 ggtgcggccg atcgatccta ggcgcgtcta cgacgtcgct attgtcggcg ccgggcccgc
     2401 gggactcgcg gctgcggttt atgcggggtc cgaggggctt tcggtcctcg tgctcgactg
     2461 ccgcgcattc ggcggtcagg cgggcgcgtc ggcgcggatc gagaactatc tggggtttcc
     2521 caccggcatc acaggaatgg cgctgatggc gcgcgcctac aaccaagcgc agaagtttgg
     2581 agttgagatg gcggtcccag atgaggtagc cggcctcgag gctgaggacg acttcgctcc
     2641 gcgacgcgtc gtcctaagac tgtccaacaa cgaacgtgtg agcgcacgtt ccctagttat
     2701 cgcaagcggg gctcgttacc ggcggctgtc aattcccaac ttggagggat tcgagggcgc
     2761 gagcgtgcac tattgggcct caccccttga agcaaagctg tgcgccgggc aagaggtggc
     2821 gctcgtgggc ggcgggaatt cggcgggaca ggcagccgtc tacttggcga accaggcagc
     2881 caaggtttgg ctgttggtac gcggtgacga tcttgccgcg agcatgtcgc gctacctcgt
     2941 ggaccgcatc cgcgggctta ccaacgtcga agtgctggcg cggaccagcg tcaccggcct
     3001 cgaaggccgc gacggaatgc ttgaagcgat tcgctggcgt cgcggagcgt cgggggaaga
     3061 ggttcggcgg cggatccaac atctattcct cttcattggt gccgaaccga acacggattg
     3121 gcttgcggga tcagggattg ctctggacgc aaaaggattc gtcttgaccg gtgcagacac
     3181 gaaggaaaag ctgcgtccgc tggagaccag ccgggaaggc gtgtttgcta tcggtgacgt
     3241 gcgctcgggt tcgatcaagc gggtcgcg
//
LOCUS       DATCWM010000463         4980 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_505427, whole genome shotgun sequence.
ACCESSION   DATCWM010000463 DATCWM010000000
VERSION     DATCWM010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4980)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4980)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4980
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_505427"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..757
                     /locus_tag="VIQ50_09055"
     CDS             <1..757
                     /locus_tag="VIQ50_09055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HEY9360570.1"
                     /translation="PPVQAPADEKILALFEAGSYEVVPHDNVRKVIARRLLEAKLTIP
                     HFYLTLDCNIGKLLAAREEINAAAPKDKDGKPAYKISVNDFVIKALALALQRVPDANV
                     TWTEGAMLRHKHSDIGVAVSIPGGLITPVVRHAEQKSLSVISNEMKDFAARARARKLA
                     PQEYQGGTTAVSNLGMYGIKEFYAIINPPHASILSVGAADERAVVRNGKIEAAHMMTV
                     GLATDHRAVDGALGAVLLNAFKALIENPVMMVV"
     gene            808..2229
                     /gene="lpdA"
                     /locus_tag="VIQ50_09060"
     CDS             808..2229
                     /gene="lpdA"
                     /locus_tag="VIQ50_09060"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEY9360571.1"
                     /translation="MAETSFDIIIIGSGPGGYVTAIRAAQLGFSTAIVERDYLGGICL
                     NWGCIPTKALLRSAEIYHYLQHPKDYGLSAEKVTYDPTAVVKRSRAVSKRLNDGVGFL
                     MRKNKVTVIWGEATIDAPGKVTVKAVTTQAPKGALAAGSYQAKHIIIATGARPRVLPG
                     LEPDKKLIWTYFEAMAPERMPKSLLVVGSGAIGIEFASFYRTFGAEVTVVEILPQILP
                     AEDAEISTFARKQFEKQGIKILTAAKVTKLEKAADSVTATIDDGKGSTQTLTVERVIS
                     AVGVVGNIENLGLEKLGVKTERGAIAVDPLNRTNVPGIYAIGDVAGPPLLAHKAEHEG
                     VICVEAIKGLKPHPMDKRLIPGCTYCSPQIASVGLTEQAAKANKLDIRVGRFPFVGNG
                     KAIALGEDQGLVKVIFDRKTGALLGAHMVGAEVTELIQGYVVAMNLETTEEELIHTVF
                     PHPTLSEMMKEAVLDAYGRVLNI"
     gene            2295..3521
                     /locus_tag="VIQ50_09065"
     CDS             2295..3521
                     /locus_tag="VIQ50_09065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360572.1"
                     /translation="MGARGIAPAQGVRAEGWERPTAQATPTPAAIAEYRRKLEEYTVA
                     RGKYEAEAEVYWSSIADKRRLRHAKRRNNQEMALSDYVLTQPPVYSGPPRPIDPSAPV
                     EEAPPRKYVPVVADFLDAAAKEFNFIPQRPRSEIEYKRAYVKVASAAGLTRDQVVRIY
                     AFESGGDGAYDVQAGLEQPKPGAQAISTALGYNQLLATNSVELMAEKGNQFTKSLSAK
                     AAGLPEEPKAALQRKIAVLKSMASFCRSVPDTWSEHDRLANTPKGLAVHALNLDLDVG
                     PLLQTQKLLDSVVFARAQRYAAILSAAELEMMNLTGDGNGLDIVRMHRHGASRCPRRI
                     SSSREAMNAQAHRRHQHGDGSREQATGCKGAGRPVSQLNVRSASPRQGLGSTRAPTDC
                     ARSARAQASNTAARRR"
     gene            complement(3460..4446)
                     /locus_tag="VIQ50_09070"
     CDS             complement(3460..4446)
                     /locus_tag="VIQ50_09070"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9360573.1"
                     /translation="MRLCRRKFLHLTAVAPALALVSSSARAQAQDFPARPVRIITHSA
                     PGGSPDALLRIVADRLSQMWGRQALALNHPGAGGAVAARTAAAAAPDGYTLYMPASSA
                     FVTLPGLQANLPLDVPRDFVPVGFVGEQPFFVTVSSSLGVTTLPEFIAFAKERPGEIS
                     YAATGRGTLSHLAGEALQQHTGIKLLMVPYLGGTAQALNDVIVGRVPMVIDGYPPLAG
                     ALQSGAVRALAVGSTARLPDFPDVPTAAETLPGFNVRGWLALVAPVGTPDAIVRKLSE
                     DLSAAVSHPETKAKLETTGNYPHPMTPEELLAFIYAEQRYWKPVLEQIARNP"
     gene            complement(4567..>4980)
                     /locus_tag="VIQ50_09075"
     CDS             complement(4567..>4980)
                     /locus_tag="VIQ50_09075"
                     /inference="COORDINATES: protein motif:HMM:NF037627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360574.1"
                     /translation="PPDTKVNLADALVAPDVLRPFLVNWEDVVRYFIRSVEADAAADG
                     TPESAELLDRLLAYKGVREVLKKFSLEVGASPVLPMHFRKQDVSLQLFTTIATLGTPL
                     DITAQELRVESFFPMNDYTARTLRNWATKRKSHDS"
BASE COUNT          973 a         1581 c         1618 g          808 t
ORIGIN      
        1 gccgcccgtg caagcaccgg ccgacgagaa gatcctcgcg ttgttcgagg ccggctcgta
       61 cgaggtcgtt ccgcacgaca acgtccgcaa ggtgatcgcg cgccggctgc tcgaggcgaa
      121 gctcacgatc ccgcatttct atctcacgct cgactgcaac atcggaaagc ttttagccgc
      181 gcgcgaggag atcaacgccg ctgcgccgaa ggacaaggac ggcaagccgg cttacaagat
      241 ctcggtcaac gatttcgtca tcaaggcgct ggcgctcgcg ctgcaacgcg tgcccgacgc
      301 caacgtgacg tggaccgaag gtgccatgct tcggcacaag cactccgata tcggtgttgc
      361 ggtgtcgata ccgggcggtt tgatcacgcc ggtggtgcgc catgcggaac aaaagtcgct
      421 ttccgtcatc tctaacgaga tgaaggactt tgccgcccgc gcgcgcgccc gcaaactggc
      481 gccgcaggaa taccaggggg gcacgaccgc ggtctcgaac ctcggcatgt acgggatcaa
      541 ggagttctac gccatcatca atccgccgca cgcaagcatt ctttcggtcg gggccgcgga
      601 cgagcgtgcg gtcgtgcgca acggcaagat cgaggcagcg cacatgatga cggtcgggct
      661 cgcaaccgac catcgcgcgg tcgacggcgc gctcggcgcc gtgctgctca acgccttcaa
      721 ggcgctgatc gaaaacccgg tcatgatggt cgtgtgagca cgacgctgcg ctaacgcgag
      781 cgcgacggcc tttgcgggag aagcggcatg gctgagacct ccttcgacat catcatcatc
      841 ggttctggtc cgggcggcta cgtcacggcg atccgcgcgg cgcagctcgg gttttcgacc
      901 gcaatcgtcg agcgcgatta tctcggcggc atctgcctga actggggctg catccccacc
      961 aaggcgctgc tgcgctcggc cgagatctac cattacctgc agcatcccaa ggattacggc
     1021 ctctcggcgg aaaaggtcac ctacgatccg accgccgtgg tcaagcgctc gcgcgccgtg
     1081 tcgaagcgcc tcaacgatgg cgtcggcttc ctgatgcgca agaacaaggt caccgtcatc
     1141 tggggcgagg cgacgatcga cgcgcccggc aaggtcacgg tgaaggcggt cacgacgcag
     1201 gcgcccaaag gcgcgcttgc ggccggcagc tatcaggcca agcacatcat catcgccacc
     1261 ggcgcgcggc cgcgcgtgct gcccggcctc gagcccgaca agaagctgat ctggacctat
     1321 ttcgaggcca tggcgccgga acgcatgccg aaatcgctct tggtcgtcgg ctccggcgcg
     1381 atcggcatcg agttcgcttc gttctaccgc accttcggcg ccgaggtgac ggtggtcgag
     1441 atcttgccgc aaattctccc cgccgaggac gccgagattt ccaccttcgc gcgcaagcag
     1501 ttcgagaagc agggcatcaa gatcctcacc gccgccaagg tgacgaagct cgagaaggct
     1561 gccgacagcg tgaccgcgac gatcgacgac ggcaaaggca gcacgcaaac gctcacggtc
     1621 gagcgcgtca tttccgcggt cggcgtcgtc ggcaatattg aaaatctcgg gctcgaaaaa
     1681 ctcggcgtga agaccgagcg cggcgcgatc gccgtcgatc cgctcaatcg caccaacgtg
     1741 cccggcatct atgcgatcgg cgacgtggcc ggcccgccac tgttggcgca caaggccgaa
     1801 cacgagggcg tcatctgcgt cgaggcgatc aagggcctca agccgcatcc catggacaag
     1861 cggctgatcc cgggctgcac ctattgctcg ccgcagattg cctcggtcgg acttaccgag
     1921 caggcggcaa aagccaacaa gctcgacatc cgcgtcggcc gctttccctt cgtcggcaac
     1981 ggcaaggcga tcgcgctggg cgaagaccag ggcctcgtga aggtgatttt cgaccgcaag
     2041 accggcgcgt tgctcggcgc gcacatggtc ggcgcggagg tgacggagct gatccagggc
     2101 tacgtcgtgg ccatgaatct cgagaccacc gaggaggaac tcatccacac ggtcttcccg
     2161 cacccgacgc tctccgaaat gatgaaagag gcggtgctcg atgcctatgg acgggtgctc
     2221 aatatctgaa gagatccttt cgggcaggga gttccagggg aagtgcggca ccgtttgatg
     2281 cattggcgct gcgcatgggt gctcgcggca ttgcgccggc gcaaggtgtg cgcgccgaag
     2341 gctgggagcg tccgacggcg caggccactc cgacgccggc cgccatcgcc gaataccgac
     2401 gcaaactgga ggagtacacc gtcgcacgcg gcaaatacga ggccgaggcc gaggtctact
     2461 ggagctccat tgccgacaag cgccggctgc gccacgccaa gcgtcgcaac aatcaagaga
     2521 tggcgctcag cgactacgtg ctcacccagc cgccagtcta ttccggaccg ccgaggccga
     2581 tcgatccctc ggcgccggtc gaagaggcgc cgccccgaaa atacgtgccc gtggtggccg
     2641 actttctgga tgcagcggcc aaggaattca acttcattcc gcagcggcct cgaagcgaga
     2701 tcgaatacaa gcgcgcctac gtcaaagttg cctccgccgc cgggctgacc agggaccagg
     2761 tggtgcgcat ctacgccttc gagtccggtg gcgacggggc ctacgacgtg caggcggggt
     2821 tagagcagcc caagccgggc gcgcaggcca tctccacggc gctcggctac aaccaactgt
     2881 tggccaccaa cagcgtcgag ctgatggcgg agaaggggaa tcaattcacc aagagcttga
     2941 gcgcgaaggc ggcgggactc cccgaggaac cgaaggcggc gctgcagaga aaaattgcgg
     3001 tgctcaagag catggcgagt ttctgccgca gcgtgccgga cacctggagc gagcacgaca
     3061 ggctcgcgaa cacgccgaaa gggcttgctg ttcatgccct caatctcgat ctggacgtcg
     3121 gtcctttgtt gcaaacgcag aagctcctgg actccgtcgt gtttgcgcgc gcccagcgat
     3181 atgctgcgat tctcagcgcc gccgaactcg agatgatgaa cctcaccggc gacggcaacg
     3241 gtctcgacat cgtgaggatg catcggcatg gcgcgagcag gtgcccacgt cgaatttctt
     3301 ccagccggga ggctatgaac gcacaagctc atcgccgcca ccaacacggt gatggatcga
     3361 gagagcaagc taccgggtgc aaaggagctg gtcgccctgt ttcccaacta aacgtacgct
     3421 cggcgtcgcc acggcaggga ctgggatcca cccgcgcgcc tacggattgc gcgcgatctg
     3481 ctcgagcaca ggcttccaat accgctgctc ggcgtagatg aaggccaaga gctcctcagg
     3541 cgtcatgggg tgggggtagt ttcctgtggt ttcgagcttc gccttggtct cgggatggga
     3601 tacggccgcg ctcaagtcct cgctcagctt gcggacgatg gcgtcgggcg tgccgacggg
     3661 cgcgaccagt gcgagccaac cgcggacgtt gaagccggga agcgtctcgg cggcggtcgg
     3721 cacatcaggg aagtctggca ggcgcgccgt cgagcccacg gcgagtgccc ggaccgcgcc
     3781 ggactgcagc gcgcccgcga gcggcggata gccgtcgatg accatcggga cacgcccgac
     3841 gatcacatcg ttgagcgctt gcgccgtgcc gccgagataa ggaaccatca acagcttgat
     3901 gccggtgtgt tgctgcagcg cttcgccggc cagatgggac agcgtgccgc gcccggtcgc
     3961 ggcatacgag atctcgcccg gccgttcttt cgcgaacgcg atgaattccg gcagggtcgt
     4021 aacgccgagc gaagacgaca cggtcacgaa aaacggctgc tcgccgacga agccgactgg
     4081 aacaaaatcg cgcggcacgt cgagcggcag gttggcctgc aggcccggca gcgtcacgaa
     4141 agcggacgag gcgggcatgt acagggtgta gccgtcggga gcggcggcag cggcggtacg
     4201 cgccgcgacc gcgccgccgg cgccgggatg attgagcgcg agggcctggc gcccccacat
     4261 ctgcgacagg cgatcggcga cgattcgcaa cagtgcgtcc ggggagccgc ccggcgccga
     4321 atgcgtgatg atccgcacgg gtctcgcggg aaagtcctgt gcttgtgccc gggcgctcga
     4381 tgagacgagc gcaagcgcgg gagcaaccgc tgtcaggtgg agaaacttgc gccggcaaag
     4441 tctcatggca ttcgcttagc tcctgcttcg catcgcatag tatcatgtcg ttgcagatcc
     4501 cacgagtgct cgcgcgggcc gcgttgacga acttgagacg tgggtaagcc gactcacgcg
     4561 acctcttcaa gagtcgtgcg atttgcgttt cgtcgcccag ttgcgcagtg ttcttgcggt
     4621 gtaatcgttc atcggaaaaa acgattcgac gcgcaactct tgcgccgtga tgtccagagg
     4681 agtgcccaaa gtcgcgattg tggtgaacag ttgcaacgat acatcctgtt tacggaaatg
     4741 catgggcaga acagggctcg ctccgacctc gagcgagaac tttttcagca cctcgcgcac
     4801 acccttatag gcgagcagtc ggtccaacaa ctcggcgctc tcgggcgtgc catccgcggc
     4861 agcatcagcc tccacgcttc ggatgaaata gcgcacgacg tcctcccaat tgacgaggaa
     4921 cgggcgcaac acatcgggcg cgaccaaggc gtcggcgaga ttgaccttgg tatccggcgg
//
LOCUS       DATCWM010000464         3918 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_521612, whole genome shotgun sequence.
ACCESSION   DATCWM010000464 DATCWM010000000
VERSION     DATCWM010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3918
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_521612"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1637
                     /locus_tag="VIQ50_09080"
     CDS             <1..1637
                     /locus_tag="VIQ50_09080"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY9360575.1"
                     /translation="AADIAPPEQVTLKEPKDWKLIGTRQRRFEVADKIAGKPIYAIDV
                     RLPNMLHAAIVQCPVFKGTLKSVDESKLAGLKGVHRVVKLTDAVAVVADSWWRAKKAA
                     EALPVSWDFGENSAVSSATIRAHVQTGLSAADARTGRTDGDVEAALAQAVKRIEADYE
                     VPFLAHATMEPQNCTAHVTADLVEVWAPTQDGETALAIAADAAGMPASNVLIHKMMLG
                     GGFGRRGIFQDFVRQAVVIAKEVGRPVKLAWTREEDIRHDFYRPVAMARLIAGLDRDG
                     MPIAWKIRTAGQSIIAAVSPRVMQFGVDRNFLQGLLEDMPYAVPNYLVDFAMRNTHVP
                     VGVWRSVNHSQNAFFKESFVDEMAFAGAADPYLFRRKLLANRPRELAVLDAAAARAGW
                     GTPPETGVFRGIALHNSQNSICAQVVEASIGSDGKVRVHRVVSAVDVGHVVNPLTIEL
                     QTESAVVFGLTAALYGEITIKDGRVEQTNFHDYPMLHLADMPRVETVIVAGTGWGGIG
                     ETGVPPLAPALCNAIFAATGKRIRSLPLKNHDLRSA"
     gene            1687..1992
                     /locus_tag="VIQ50_09085"
     CDS             1687..1992
                     /locus_tag="VIQ50_09085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020095605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C"
                     /protein_id="HEY9360576.1"
                     /translation="MNATRIVTAAALCLALPLHGWAAGLADAPPGALSCSGCHASAHT
                     ADAAVPRLIGRNPADIVAAMQAFKSGQVPSTVMERIAKGFTEDEVKAIAAWYGAQKD"
     gene            2006..3277
                     /locus_tag="VIQ50_09090"
     CDS             2006..3277
                     /locus_tag="VIQ50_09090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020095604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY9360577.1"
                     /translation="MSAKRSSRREFLKSAAAGAALLPLPAIAQGARGRVVVVGGGFGG
                     ATCARFIKRIDSRITVTLVEANPTFVACPFSNGVITGLREIRAQEFGYDKFAGDQVVL
                     QLSPGTAVDPQGRTVTLGNGTQLPYDRLVLSPGIDIRWDGLPGYTEAAAERMPHAWKA
                     GEQTLLLRRQLEAMEDGGTVAISAPANPFRCPPGPYERASLIAYYLKTKKPKSKLIVL
                     DAKDVFSKQRLFQNAWRTLYPNLEWVSLSNGGKVTSVEVAEMTLVTDFGRHKADVANV
                     IPPQKAARIAEMAGVADRTGWCPIDPATFESKLQPNVHVIGDASIAGAMPKSAFSANA
                     QAKVCAAAVAKLIAGEKPDEPRLINTCYSLVAPDYGISIEGVYRPADGQIKEVEGSGG
                     VSALDAPNSTRALEATFANAWFNTITTEVFG"
     gene            3294..3743
                     /gene="soxX"
                     /locus_tag="VIQ50_09095"
     CDS             3294..3743
                     /gene="soxX"
                     /locus_tag="VIQ50_09095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008140155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur oxidation c-type cytochrome SoxX"
                     /protein_id="HEY9360578.1"
                     /translation="MAAIALAAAMAGFADDAASQEQVRPYTVVGDAIPESLTGVKGDA
                     ERGRGIVVNRQVGLCLLCHSGPFPEEKFQGTLAPDLKGTGARWSEGQLRLRIVDASHL
                     NPNTIMPPYYRTEGLTRVAPAYQGKPVLSAEQIEDVVAYLATLRDER"
BASE COUNT          716 a         1280 c         1285 g          637 t
ORIGIN      
        1 ccgctgccga catcgcgccc ccagaacagg tcacgctcaa ggagccgaag gactggaagc
       61 tgattggcac gcgacagagg cgtttcgagg ttgccgataa gattgcgggc aagccgatct
      121 acgccatcga cgtgcggctg ccgaacatgt tgcacgcggc gatcgtgcaa tgtccggtgt
      181 tcaagggcac gctgaaatcg gtcgacgaga gcaagctcgc cgggctcaaa ggcgtccacc
      241 gcgttgtgaa gcttacggac gccgtcgcgg tggtggcgga cagctggtgg cgagcgaaaa
      301 aggcggcgga agcgctgccg gtgagctggg atttcggcga gaattccgcc gtctccagcg
      361 ccacgatccg tgcccatgtg caaaccgggc tcagcgccgc cgatgcgcgc accggccgca
      421 ccgacggcga cgtcgaggcc gcgcttgcgc aggcggtcaa gcgaatagag gcggattacg
      481 aggtcccttt cctcgcccac gcgaccatgg agccgcagaa ctgcacggcg cacgtgaccg
      541 ccgatttggt cgaggtctgg gctccgaccc aggacggcga gacggcgctc gcgatcgcgg
      601 cggatgccgc cggcatgccg gcgagcaacg tcttgatcca caaaatgatg ctgggcggcg
      661 gcttcggtcg acgcgggatc ttccaggatt tcgtgcgtca agcggtggtg atcgcgaaag
      721 aggtgggccg ccccgtgaag ctcgcttgga ctcgcgaaga ggacatccgc cacgacttct
      781 accgcccggt ggcgatggcg aggctcatcg ccggtctcga ccgcgacggc atgccgatcg
      841 cgtggaaaat ccgcacggcg ggtcaatcca tcattgccgc cgtctctccg cgggtgatgc
      901 agttcggcgt cgacaggaat tttctccagg gcctgctcga ggacatgccc tatgcggtgc
      961 cgaactacct tgtcgatttc gcgatgcgca acacccatgt tccggtcggg gtctggcgca
     1021 gcgtcaacca ttcccagaac gcattcttca aggaatcctt cgtcgacgaa atggcatttg
     1081 cgggcgctgc cgatccctat ctgtttaggc gcaagctctt ggcaaacagg ccgagggagc
     1141 ttgcggtgct cgacgccgcc gccgcgcgtg ccggatgggg tacgccgccg gagacgggcg
     1201 tattccgcgg catcgcgctc cacaactcgc aaaacagcat ttgtgcgcaa gtggtcgagg
     1261 cctcgatcgg cagcgatggc aaagtgcgtg tgcaccgcgt ggtgtccgcg gtcgacgtcg
     1321 gccacgtggt caacccgctc accatcgagt tgcagaccga gagcgccgtc gtgttcggcc
     1381 tcaccgcggc gctctacggc gagatcacca ttaaggacgg acgggtggag cagacaaact
     1441 ttcacgatta cccgatgctg catcttgccg acatgccacg ggtcgagacc gtcattgtcg
     1501 cgggcaccgg ctggggcggg atcggggaga cgggcgtgcc tccgctggcc cccgcgttgt
     1561 gcaacgcgat cttcgcggcg acgggcaagc gcatccgctc cttgccgctc aaaaaccatg
     1621 atctaaggag cgcataagca gggccgagcg ccgcaatcgt cgcccttcac agccgggagg
     1681 cccgacatga atgccacacg catcgtgacc gctgccgcct tgtgtcttgc attgccgctt
     1741 catggttggg cggcgggctt ggccgatgcc ccgcccggcg ccctctcctg ttccggctgc
     1801 catgcatccg cgcatacggc ggatgcggcg gtgccgcggc ttatcggccg caatccggcc
     1861 gacatcgtcg ccgccatgca ggcgttcaag tcgggacaag ttccatcaac cgtgatggag
     1921 cggatcgcca aaggctttac cgaggacgag gtcaaagcca tcgccgcctg gtacggcgcc
     1981 cagaaggact gagatggagg ccgtcatgag cgcaaagcgc agcagccggc gtgaattcct
     2041 caaatcggca gcggccggag cagcgctgct gccgcttccg gcgatcgccc aaggcgcccg
     2101 cggacgcgtg gtcgtcgtgg gcggaggctt cggcggagca acttgcgccc gtttcatcaa
     2161 gcgcatcgat tcgcgcatca ccgtgacgct ggtcgaagcc aacccgacat tcgtcgcctg
     2221 cccattcagc aacggcgtca tcaccggact gcgcgagatc agggcgcaag aattcggtta
     2281 cgacaaattt gccggcgatc aggtggtgct tcagctctcg cccggcaccg cggtcgaccc
     2341 gcagggacgc acggtgacgc tcggcaacgg cacgcaactt ccttacgacc gcctggtgct
     2401 ctcgcccggc atcgatatcc gctgggacgg tttgcccggc tataccgaag ccgccgccga
     2461 gcgcatgccg catgcatgga aggcaggcga gcagaccctg ttgctgcgac gccagctcga
     2521 agcgatggag gacggcggca cggtggcgat atcggccccc gccaatccct tccgatgtcc
     2581 gccgggtcct tacgagcggg cgagcctgat tgcctattat ctcaagacca aaaagccgaa
     2641 atcgaagctc atcgtcctcg acgccaaaga cgtcttctcc aagcagcgcc tgttccagaa
     2701 cgcgtggagg acgctctatc ccaatctcga atgggtgtcg ctgtcgaacg gcggcaaagt
     2761 cacctcggtc gaagtcgccg agatgacgct cgtgaccgat ttcggtcgcc acaaggccga
     2821 tgtcgccaac gtcattccgc cgcagaaggc ggcgcgcatc gccgagatgg ccggggtcgc
     2881 cgaccgcacc ggttggtgtc cgatcgatcc cgccacgttc gagtccaagc tgcagcccaa
     2941 tgtccacgtc atcggcgacg cctcgattgc gggcgcgatg ccgaaatcgg cgttctccgc
     3001 caacgcgcag gccaaggtct gcgccgccgc ggtagcgaag ctcatcgccg gcgaaaagcc
     3061 ggacgagccc aggctgatca acacctgcta cagtctggtg gcgcccgact acggcatctc
     3121 gatcgaaggc gtctaccgac ccgccgacgg tcagatcaag gaggtcgaag gctcgggcgg
     3181 cgtgagcgcg ctcgatgcgc cgaactccac gcgcgcgctc gaagcgacgt tcgcgaatgc
     3241 ctggttcaac acgatcacca ccgaagtctt cggctgagcg ttgcggcgcg ctgatggcgg
     3301 caatcgcgct cgccgccgcg atggcgggct ttgccgatga tgcggcaagc caggagcaag
     3361 tgcgtcccta taccgtggtc ggcgatgcga tccccgagtc gctgaccggg gtaaagggcg
     3421 acgcggaacg cgggcgcggc atcgtcgtta accggcaggt cgggctatgc ctgctctgcc
     3481 acagcgggcc cttcccggag gagaagttcc agggcacact cgcgccggac ctcaagggaa
     3541 ccggagcgcg ctggtcggaa ggccagctgc gattgcgcat cgtggatgcg agccacctca
     3601 accccaatac gatcatgccg ccgtattatc gaaccgaagg tctcacacgt gtcgctccgg
     3661 cctatcaagg caagccggtg ctgagcgcgg agcagatcga ggacgtagtc gcctatctcg
     3721 cgaccttgcg tgacgagaga tgatcatgac gcgccaggac aagccgttgc caagaacccg
     3781 gcggcgcttc ttggtcgaag ccgcggcgat cgccggcgcg gccggcgtcg gcttcccgct
     3841 cgcgaccgag cccgcggctg cgacaccggc cgagatgcgc gccgccatca ggaagatcgt
     3901 cggcgaggcg ccgctcaa
//
LOCUS       DATCWM010000465         3031 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_105983, whole genome shotgun sequence.
ACCESSION   DATCWM010000465 DATCWM010000000
VERSION     DATCWM010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3031
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105983"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            780..983
                     /locus_tag="VIQ50_09100"
     CDS             780..983
                     /locus_tag="VIQ50_09100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018043862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEY9360579.1"
                     /translation="MATGTVKFFNSQKGFGFIAPSDGSKDVFVHISAVERAGMRTLVE
                     GQKVSYEIVTDRGKQAAANLQAA"
     gene            1139..1762
                     /locus_tag="VIQ50_09105"
     CDS             1139..1762
                     /locus_tag="VIQ50_09105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009029717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEY9360580.1"
                     /translation="MSPNKEKLALFIDGANLHAAVKSLGFDIDYKRLLREFQSRGDLL
                     RALYYTAVIEDQEFSSIRPLIDWLDYNGYTVVTKPTKEFVDQTGRRKIKGNMDIELAV
                     DAMELAGRIDHMVLFSGDGDFRPLVEAVQRRGVRVSVVSTTSTQPPMIADELRRQADQ
                     FIDIVELQPKISRDPTERAARETREPRHFLQRRPTQHTGADEEEFED"
     gene            1868..2131
                     /locus_tag="VIQ50_09110"
     CDS             1868..2131
                     /locus_tag="VIQ50_09110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360581.1"
                     /translation="MTTTTRKPNKTITMPSGPEESVPEPVTQRKRADTGRFRLQVDRQ
                     TKGSYASFEDAEKAGLGIKKEHPILQVAVYDGVESVNKIIELP"
     gene            complement(2276..2884)
                     /gene="phnN"
                     /locus_tag="VIQ50_09115"
     CDS             complement(2276..2884)
                     /gene="phnN"
                     /locus_tag="VIQ50_09115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0019634 - organic phosphonate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate metabolism
                     protein/1,5-bisphosphokinase (PRPP-forming) PhnN"
                     /protein_id="HEY9360582.1"
                     /translation="MRWIAAALRSLTARSKSIGPGRLVLVVGPSGAGKDTLIAHARAE
                     CRDDASVVFPARVVTRPPSVFEDNEFMPQSAFEQAAANGAFAVWWSAHGHMYGIPLAV
                     DFDIEAGRTVVCNVSRTVVGALRARYANVVTVLVTAPQDVLQSRLAARERASDGRVSD
                     RMRRLELSEGKLRPDVIINNVGDPQSGASKLVDTLYASGALA"
     gene            complement(2881..>3031)
                     /locus_tag="VIQ50_09120"
     CDS             complement(2881..>3031)
                     /locus_tag="VIQ50_09120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011504215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9360583.1"
                     /translation="MVSKTPAEAVGLHDRGEIAVGKRADLIRVRLAHDVPAVRSVWRG
                     GRRVA"
BASE COUNT          639 a          956 c          912 g          524 t
ORIGIN      
        1 cacatcgaag agcgtgaatt caacgcgcgt tgcgggcttg cgtgccattt tggttttcct
       61 gtgtgatctt ctaagctgcc acatcgagca cggcattgcg atcatcgagc cagggccggc
      121 aaagaccaat tgcccagcac gtaacctgga tgggcagtca atggcaagga cggcaaaact
      181 cggacgcgtg cgtatatata gtcgcggggc gccaaatcaa cccgccacac aaggagggag
      241 ccaatggcat ttaagccgaa ttaccgtcga gaccgggccg agcgacagag ggcagcacgc
      301 gcgcgcgctg aggagaaaca aagacgaaag gaggagaaga ctgcgctgcg caaagccgag
      361 cgcgagtcaa ccgaagcccc gccggatgag aagcaaacga ccgagtagcc ttgagggtta
      421 ctggctccgc aaaactccgc cattcccgtg cagagagtgt ctctgcaatc gctttcggcg
      481 tcgggcgcgc caacgacctc tattatccac gcgcccagtg cgcgcacggc cgcaagctcc
      541 tcgagggcaa accttcaata gcgacgccct ttaacgccca ccctgcatcg gattgatgcc
      601 cgcatccggg ttgacgttgc ggccacgttc acatagatag caggccgcaa ccagttttcg
      661 gtctgcctcg cgacgctccc gttttacggt ggccagccag ctcccccaaa attggatgac
      721 cggccacgcg atgctcgcct gatcggatac gcaaacgatt gcactgcaag gaggccatga
      781 tggccacagg taccgtgaag ttcttcaatt ctcaaaaagg ctttggattc atcgcgccga
      841 gcgacggcag caaggacgtg ttcgtgcaca tcagcgcggt ggagcgcgcc ggcatgcgca
      901 ccctggtcga aggccagaag gtcagctacg agatcgttac cgaccgaggc aagcaggcgg
      961 cggctaatct gcaagccgcg taaccgacgg ccattggtcc cgaatccgct gaagtgacaa
     1021 cgttcggctt tattgacgcc gggcgttgtc gcgcacgccc gccttctgga tagccagagt
     1081 caggcgctga atttcgcgca atcgtgcgcg ccatgctgcg tggtcggtga tcaaactcat
     1141 gtctcccaac aaagaaaaac tcgcgctgtt cattgacggt gctaatctcc atgccgccgt
     1201 gaaatcgctc ggcttcgaca tcgattacaa gcggcttttg cgcgagtttc agtcgcgcgg
     1261 cgatctgcta cgggcgctct attacaccgc cgtcatagaa gatcaggaat tttcttcgat
     1321 tcggccgttg atcgactggc tcgactataa cggttacacg gtcgtgacta agccgaccaa
     1381 agagttcgtc gaccagaccg gccgtcgcaa gatcaaaggc aatatggata tcgagctcgc
     1441 cgttgacgct atggaactcg cggggcgcat cgatcacatg gtgttattct ccggcgacgg
     1501 ggatttccga ccgctggtcg aggcggtgca gcgacgcggg gtgcgcgtca gcgtggtctc
     1561 caccacctcg actcagccgc cgatgatcgc cgacgagctg cgccgccagg ccgaccagtt
     1621 tatcgacatc gtcgagttgc agcctaagat cagtcgtgac ccgaccgagc gcgcggcccg
     1681 cgaaacccgc gagccacggc atttcctgca gcgccggcca acgcagcaca ccggtgccga
     1741 cgaggaagaa ttcgaggact aatttccgag cgattgggca catctgcgcc ggaagcgtgc
     1801 gcgccgtgcg acatccttca tcgcctgcag cacgattttg atacctacca ccccaaggag
     1861 atcatcgatg acaacgacca cgcgaaagcc gaacaagacc ataaccatgc catccgggcc
     1921 ggaggaatcc gtcccggagc cggtcacgca gcgcaagcgg gcggacaccg gccgatttcg
     1981 cctccaggta gatcggcaaa cgaaaggctc gtatgcgagc tttgaagatg ccgaaaaagc
     2041 gggattgggg atcaagaaag agcacccgat ccttcaggtc gcggtgtatg acggcgtaga
     2101 gagcgtgaac aagattatcg aattgccgta aatcatcctc accggcggac atatccggcc
     2161 gtaccccgat gccaacatct acgcgggggt ctgcccgccg cgctatcaac ggcatgacga
     2221 ttctacctaa tctcatcccg ctgtcgttgt gcttgcgacc tgctgaggcg tcgcctcatg
     2281 cgagcgcgcc gctggcatag agcgtgtcga caagcttgct cgctccgctc tgcgggtcac
     2341 cgacattgtt gatgatcaca tcggggcgca acttgccctc cgagagctcg aggcggcgca
     2401 tccgatccga gacccggccg tcgcttgcgc gctcgcgcgc ggcgaggcga ctctgcagca
     2461 cgtcctgcgg cgcggtcacc aggacggtca cgacattggc gtaacgcgcg cgcagggcgc
     2521 cgacgacggt gcgcgagacg ttgcagacca ccgtccgtcc ggcctcgata tcgaaatcga
     2581 cggcgagggg aattccgtac atgtggccgt gcgcgctcca ccagaccgca aaagcgccgt
     2641 tggccgccgc ttgctcgaat gcggactgcg gcatgaattc attatcttcg aaaacggagg
     2701 gcggccgcgt gacgacgcgg gcgggaaaaa cgacgctcgc gtcgtcgcgg cactccgcgc
     2761 gggcgtgcgc gatcaacgta tccttgccgg cgccgctcgg tccgacgacc aacactagcc
     2821 gtccgggacc gatcgatttc gatcgagcgg tcaacgagcg caaagctgcc gcaatccacc
     2881 tcatgccacg cgtcgaccgc cgcgccacac gctgcgaacc gccggcacat cgtgcgcgag
     2941 gcgcacgcgg atgagatcgg cgcgcttgcc gacggcgatt tcgccgcggt cgtgcaaccc
     3001 gaccgcctcg gcgggcgtct tgctgaccat g
//
LOCUS       DATCWM010000466         3979 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_68244, whole genome shotgun sequence.
ACCESSION   DATCWM010000466 DATCWM010000000
VERSION     DATCWM010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3979)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3979
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68244"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1475
                     /locus_tag="VIQ50_09125"
     CDS             <1..1475
                     /locus_tag="VIQ50_09125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014497244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alkaline phosphatase D family protein"
                     /protein_id="HEY9360584.1"
                     /translation="GSIAKPFASRAADRPLITHGIQSGDVSTDCAIVWARADRPSRML
                     VEIATSDSFSNIRSVGFAEALPQTDFTAKALIENLPPGQDVFYRIRFEDLSFPVLSEP
                     RVGHFRTAPSERRNVSFVWSGDTAGGGWGIDESRGGMRTYATMLRSAPDFFIHCGDHI
                     YADCPIPSERKLPNGQLWKNVVTEAKSKAARTLAEFRGNYKYNLLDENVRAFNAQVPI
                     FAQWDDHEVSNDWSPDAARGRAARAGNNIHALAARGRRAFHEFMPLRTRAIYRKIPYG
                     PLLDVFLLDMRSYRTALREDGSATPILGRAQASWLKRELVNSRATWKVVAADLPIGVV
                     SGDAVGQGDGPPRGREIEIADLLAFNKHAGIRNIVWLTADMHYTAAHYYDPNAAVFQD
                     FEPFWEFISGPIHAGTWRPQPLDNTFGPRVVFQKGCSGDQADDLAPCFGLQFFGQVTI
                     DGGSEVMTVTLKDVEDRDLWSTRIEPRMERWSRGAPAVRS"
     gene            1727..3529
                     /locus_tag="VIQ50_09130"
     CDS             1727..3529
                     /locus_tag="VIQ50_09130"
                     /EC_number="3.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase"
                     /protein_id="HEY9360585.1"
                     /translation="MHRFAAAAAGIALLAAGSTSFAQTIYPIDRAGILAGTTFDFKVE
                     FPGVADPAKVSISINGEDYAKALGNTASFIAREDGKDQSALILRDVSLTQPGDYKVRV
                     TDGVLSREITWNVYATGQRKAKNVILFIGDGMSPAHRIAARLLAKGIAEGKARGKLAM
                     DDMPHMALVATTGTDSIITDSANSASAYATGHKSAVNAMGVYADRTLDPLDDPKVETI
                     TSLVKRRLGMAVGIVTNTEIEDATPAAMLAHVRRRSEHDRIVEQYFAAKPDVLMGGGK
                     ANFLPKGADGAKRKDEIDFLTRFREAGYSIALTGPEMAAAAADPGTRKLLGLFALGNM
                     DGVLDRKFLKGGTVRKFPEQPDLTEQVGAALAVLSRNESGFFLMVESGMIDKYTHLLD
                     MERAVYDTIMLDNAVRLARDWASARGDDTLILVVADHNHPIGLVGTIDDDMSKEAPAA
                     MRERVRVYERAGFPNYGTPDAEGYPSRVDVSRRLALFSASLPDHYETYRPKLDNPNEP
                     TVTGTDPSTFVANDRYKSIPGAVFRFGNLPAMINADVHSGEDVILTATGPGSDGVRGQ
                     LDNTDVFRVMVEALGLGAASGTDGRQTPAVPASR"
     gene            3672..>3979
                     /locus_tag="VIQ50_09135"
     CDS             3672..>3979
                     /locus_tag="VIQ50_09135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012042124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HEY9360586.1"
                     /translation="MAADGLITMRSSHGPKDTMNRLEAQVKAKGMTVFARIDHAAGAA
                     EVGLPLRPTELLIFGNAKGGTPLMQAEQVIGIDLPLKALVWQDEAGVTWLSYNDPTWL
                     A"
BASE COUNT          772 a         1262 c         1236 g          709 t
ORIGIN      
        1 ccggcagcat cgctaaaccc tttgcgagcc gcgcggccga tcgcccgctc atcacccatg
       61 gcatccaatc gggcgacgtt tcgacggatt gcgccatcgt gtgggcgcgc gccgaccggc
      121 cctcgcgcat gctggtcgaa atcgccacca gcgacagctt cagcaacatc cgcagcgtcg
      181 gttttgccga agctctgccg cagaccgatt tcacggccaa ggcgctgatc gaaaatctgc
      241 caccgggaca ggacgtattc tatcgcatcc gcttcgagga tctttcgttc ccggtcctaa
      301 gcgaaccgcg ggtcgggcac tttcgcaccg caccgagcga gcggcgcaac gtctccttcg
      361 tgtggtccgg cgataccgcg ggcggcggct ggggcatcga cgaatcccgc ggcggcatgc
      421 gcacctatgc gacgatgctg cggagcgcgc cggatttctt catccattgc ggcgaccaca
      481 tctacgccga ttgtccgatt ccgtcggagc ggaagcttcc gaacggacag ctctggaaga
      541 acgtcgtcac agaagcgaag tccaaggctg cgcgcacgct cgccgagttt cgcggcaatt
      601 acaaatacaa tctgctcgac gagaatgtgc gggcgttcaa tgcccaggtg ccgatcttcg
      661 cgcagtggga cgatcacgaa gtcagcaatg attggtctcc ggatgcggcg cgaggccgcg
      721 cagcccgcgc cggcaacaac atccacgcgc ttgccgcgcg cggacgtcgc gcctttcatg
      781 aattcatgcc gttacggacg cgcgccatct atcgcaagat tccctacggt cctctgctcg
      841 acgttttcct gctggacatg cgctcctacc gcaccgcgct gcgcgaggat ggttcggcga
      901 caccgattct cgggcgtgca caagcgtcct ggctcaagcg cgagctcgtg aactcgcggg
      961 cgacctggaa ggtcgtcgcc gccgacctgc cgatcggcgt cgtgagcggc gatgcggtcg
     1021 ggcaggggga cggtccgccg cgcgggcgcg aaatcgagat cgccgacctt ctcgccttca
     1081 acaagcacgc cggcatccgc aacatcgttt ggttgaccgc cgacatgcac tatacggctg
     1141 cccactacta cgaccccaac gcggccgtct tccaggactt cgagccgttc tgggaattca
     1201 tctccggccc aatccacgcc gggacttggc gtccgcaacc gctcgacaac accttcggtc
     1261 cgcgcgtggt gttccagaag gggtgcagcg gcgatcaagc ggacgacctc gctccctgtt
     1321 tcgggctgca atttttcggc caagtcacta tcgacggcgg cagcgaggtg atgaccgtta
     1381 cgctcaagga cgtcgaggac cgggacctct ggtcaacccg catcgagccg cggatggaac
     1441 gatggtcgcg cggcgcccca gccgtccgca gctaggccga acggcctgat gttgtcacag
     1501 aactgcaacc gaaacgtcat aaacgccgaa tagctctggc ctctagtgtc ccgattccga
     1561 agttcgcatc atcgtgccgt agcctcgttt gcgaacttcg gaatcgaagg acactagcaa
     1621 ctattgatct agtgtggctt tggttcagaa gtccgcattt cagactcgct gcaaggatga
     1681 tgcggacttc tgaaccgcca cactagtcga tggaggaact gcggacatgc accgatttgc
     1741 tgccgccgcg gccggaattg cacttctggc tgccggttcg acaagctttg cgcagacgat
     1801 ctacccgatt gatcgggccg ggatcttggc cggcacaact ttcgatttca aagtcgaatt
     1861 tcccggcgtg gccgatccgg ccaaggtctc gatctcaatc aatggcgagg actacgccaa
     1921 ggcgctcggc aacaccgcca gtttcatcgc gcgcgaggac ggcaaggatc aatcggcttt
     1981 gatcctgcgc gatgtttcgc ttacacagcc aggggactac aaagtccgcg tcacggacgg
     2041 cgtgctgtct cgcgagatca cctggaacgt ctatgccacc ggtcagcgaa aggccaagaa
     2101 cgtaatccta ttcatcggtg acggcatgtc gccggcgcat cggatcgccg cgcgcctgct
     2161 ggcgaagggc atcgcagaag gcaaggcgcg gggcaagctg gcaatggacg acatgccgca
     2221 tatggcattg gtggcgacca ccgggaccga ttcgatcatt accgattccg caaattcggc
     2281 cagcgcctac gccaccggtc acaaatcggc agtcaacgcc atgggcgtct atgccgaccg
     2341 cacgctcgat ccgcttgatg atccgaaagt cgagaccatc accagcctgg tcaagcggcg
     2401 gcttggaatg gcagtcggca tcgtcacgaa caccgagatc gaggatgcta ccccggctgc
     2461 catgctcgcg catgtgcgcc ggcgcagcga acacgaccgc atcgtcgagc aatatttcgc
     2521 ggccaaaccc gacgtgctca tgggcggcgg caaagccaat ttcctgccga aaggcgccga
     2581 cggcgccaag cgcaaggatg aaatcgattt cctgacgcgc ttccgcgaag ccggctattc
     2641 catcgcgctc accgggccgg aaatggctgc cgcggccgca gatcccggca cgcgcaagct
     2701 gctcgggtta tttgccctcg gtaacatgga cggcgtgctc gatcgcaagt ttctcaaggg
     2761 cggaacggta cggaagtttc ccgagcagcc ggacttgacc gagcaggtgg gcgccgcgct
     2821 agccgttctc tcccgaaacg agtccggctt cttcctgatg gtggaatcag ggatgatcga
     2881 caagtacacg caccttctcg atatggagcg ggcggtctac gacacgatca tgctcgacaa
     2941 tgccgtcagg ctcgcacgcg attgggcgag cgcgcgcggc gatgacacgc tcattctcgt
     3001 cgtggccgac cacaatcacc cgatcgggct cgtcgggacg atcgacgacg acatgtcgaa
     3061 agaggccccc gccgccatgc gcgagcgcgt ccgcgtctac gagcgggccg gctttccaaa
     3121 ctacggaacg cccgatgccg agggctaccc ctcgcgtgtg gacgtaagcc gtcgcctggc
     3181 tttgttctcg gcaagcttgc ccgatcacta cgagacgtat cggccgaagc tcgacaatcc
     3241 gaacgaaccc accgtcaccg gcacggatcc tagcacgttc gtcgcgaacg accgttacaa
     3301 gagcattccg ggcgccgtgt ttcgcttcgg caatctaccg gccatgatca atgccgacgt
     3361 gcattcgggc gaagacgtca ttctgaccgc gacgggaccc ggcagcgacg gcgtgcgcgg
     3421 gcagttggac aacacggacg tgtttcgagt catggtcgaa gcgctggggc tcggcgcggc
     3481 aagtggaacc gatgggcggc aaacgccagc cgttccggca agccggtgat gccggggtgg
     3541 aggcggcctg catccggctt cgcagcttaa gcgcgtggtc ctggttggcc gacgcggcca
     3601 gcggctggcg tctgaggatg tctcgaaact tcgcgttggc cgtggcgata tggctatggg
     3661 gagtgcaggc aatggcggca gacggattga taacgatgcg cagcagccac gggccgaagg
     3721 acaccatgaa ccggctcgaa gcccaggtga aggcaaaggg gatgacggta ttcgcgcgca
     3781 tcgatcacgc agctggagcc gcggaagtcg ggttgccgct gcggccgacc gagctcctga
     3841 tcttcggcaa tgccaagggg ggcacgccgc taatgcaggc agagcaggta atcggcatcg
     3901 atctgccgtt gaaggcgttg gtttggcagg atgaagcggg cgtcacctgg ctctcctaca
     3961 atgatccgac ttggctcgc
//
LOCUS       DATCWM010000467         2477 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_343612, whole genome shotgun sequence.
ACCESSION   DATCWM010000467 DATCWM010000000
VERSION     DATCWM010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2477)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2477)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2477
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_343612"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..605)
                     /locus_tag="VIQ50_09140"
     CDS             complement(<1..605)
                     /locus_tag="VIQ50_09140"
                     /EC_number="4.2.1.84"
                     /inference="COORDINATES: protein motif:HMM:NF014973.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0046914 - transition metal ion binding
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrile hydratase subunit alpha"
                     /protein_id="HEY9360587.1"
                     /translation="MAHDTHDTQAAHGHMQDHEGHVLGVKADLEYWRTKRLEPRVLQL
                     HRRGVLTLYDLLRAAAHLPSPPIGANEAAHDIEGRIRALEDGLDDYIRGIGLASIDPS
                     EHPSVIEDTRKERGDYDDFFRIAKPHHDGTLEERIARLERDLREYQRLLQVLMHALLE
                     KGVLTAQQLERQRAFLAGRGAWNGARIVARAWVDPAFKQALL"
     gene            complement(652..1644)
                     /locus_tag="VIQ50_09145"
     CDS             complement(652..1644)
                     /locus_tag="VIQ50_09145"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9360588.1"
                     /translation="MPGKTTMIAAVAIAAAALATPGSAQTPLKMTLFGQPSVNNDSIW
                     LALERGLYKAEGLDVTYRLFPSGTTAFQSFQTGQGDIVMTGDLPSVQYFFRSNGNYRT
                     IAAIERDAKGYVVIAAKEISKPQDLIGKTIATRVGSTGSWFISEYLKKNGVDASKVTV
                     KNLDTQVLPAALCGGEIAAFFIWQPIGSRTLEICPDKAHQLSDATGYVQGYLVAGARP
                     EWLASAEGKDIATRWLRATIKGRDLAEKDFPAVAAYAKAKLDLSEKATRDQWDTNTRP
                     LALDKVYYDDFCSLSRWAREEKLTDQPVDFAKLTWPDGLRAISAKLVEPPPPPC"
     gene            complement(1692..>2477)
                     /locus_tag="VIQ50_09150"
     CDS             complement(1692..>2477)
                     /locus_tag="VIQ50_09150"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9360589.1"
                     /translation="PLRGFAAMPGRGFLLTAGSIAIAFLSWQVLSTFIFNPFLIPPPL
                     EVIRTAIPMILSGEILADVSISMSRVLVGFVVGSLAAIVFGVLLGRLQLLHDLLDPII
                     ELMRYLSPTAMIPIAVIWFGIGELSKYFLIFWGTFFIVLVNTIAGVWRAPIARQRAAE
                     CLGANQMQIFVLVVIPSAAPYIVTGMRVAMASSFMSIIPAEILAADSGIGYLLQKSSM
                     LLQTNRIFVALLTICLLGFLFDRIFRFLVARTLARFMSFVTAT"
BASE COUNT          453 a          765 c          839 g          420 t
ORIGIN      
        1 aggagcgcct gcttgaaggc ggggtcgacc cacgcgcggg cgacaatacg ggcgccgttc
       61 caggcgccgc gcccggcgag gaacgcgcgc tggcgctcga gctgctgcgc cgtcagcacg
      121 cccttctcga gcaacgcgtg catgagcacc tggagcaggc gctgatactc gcgcaggtct
      181 cgctccagcc gcgcgatgcg ctcttccagc gtgccgtcat ggtgcggctt ggcaatgcgg
      241 aagaagtcat cgtaatcgcc gcgctccttg cgcgtatcct cgatgaccga gggatgctcg
      301 gacgggtcga tcgaggcgag gccaatgcca cgaatgtagt catccaggcc gtcttcgagc
      361 gcccggatgc gtccctcgat gtcgtgcgca gcctcgttcg ctccgatcgg cggcgaggga
      421 agatgggcgg cggcgcgcaa caagtcgtag agcgtgagca ccccgcggcg gtgcagctga
      481 agcacgcgcg gctcgaggcg cttggtgcgc cagtactcga ggtcggcctt cacccccagg
      541 acgtggcctt cgtggtcctg catgtggccg tgtgcggcct gcgtgtcgtg cgtgtcgtgc
      601 gccatggtcc ggtccttcgc gctccgcagc gctatgcgcc aacgctgccg ctcaacacgg
      661 cggcggcggc ggctcgacca gcttggcaga gatggcgcgc agcccatcgg gccacgtgag
      721 cttggcgaag tcgacgggct ggtccgtgag cttttcctcg cgcgcccagc ggctgagcga
      781 gcagaagtcg tcgtagtaaa ccttgtcgag cgccagcggc cgcgtgttcg tgtcccattg
      841 gtcgcgcgtg gccttctcgc tcagatccaa cttggccttg gcataagcgg ccaccgcagg
      901 gaaatccttc tcggcgaggt cgcggccctt gatcgtggcg cgcagccagc gggtggcgat
      961 gtctttccct tccgccgagg cgagccattc cggccgggcg ccggccacca aatagccctg
     1021 gacgtaaccg gtcgcgtccg agagctgatg cgccttgtcg ggacagattt cgagcgtgcg
     1081 cgagccgatc ggttgccaaa tgaaaaacgc cgcgatctcg ccgccgcaca gcgccgccgg
     1141 cagtacctgg gtgtcgagat tttttaccgt gaccttgctg gcgtccaccc cgttcttctt
     1201 gaggtactcc gaaatgaacc acgagccggt cgacccgacg cgcgtggcga tcgtcttgcc
     1261 gatcaaatcc tgcggcttgc tgatctcttt tgccgcgatc acgacgtagc ctttggcgtc
     1321 gcgctcgatg gcggcgatcg tgcgatagtt gccgttgctg cggaagaagt actgcacgct
     1381 cggcagatcc ccggtcatga cgatgtcgcc ctggccggtc tggaaactct ggaaggcggt
     1441 ggtgccggag ggaaacagcc ggtaggtgac gtcgagccct tccgccttgt agaggccgcg
     1501 ttcgagcgcg agccagatcg agtcgttgtt gaccgacggc tgcccgaaca gcgtcatctt
     1561 cagaggcgtt tgcgcgctcc ccggcgttgc caacgccgcc gcggcgatcg cgactgcggc
     1621 tatcatcgtc gtctttccag gcataacggc cctccgaggt tggcgttgat ccgttccgtt
     1681 taatcgccgc atcacgtcgc ggtgacgaac gacatgaagc gcgcgagcgt gcgcgcgaca
     1741 agaaagcgga agatgcggtc gaacaggaat ccgagcaagc agatcgtgag cagcgcgacg
     1801 aagatgcgat ttgtctgcaa cagcatcgag gatttctgca acagatagcc gatgccggag
     1861 tcggcggcga gaatctccgc cggaatgatg ctcatgaacg aggaggccat cgccacccgc
     1921 atgccggtca cgatgtacgg ggccgccgac gggatgacga ccaggacgaa gatctgcatc
     1981 tggtttgcgc cgaggcattc ggccgcacgc tggcgcgcga tcggcgcgcg ccagaccccc
     2041 gcgatggtat tgacgaggac aatgaagaac gtgccccaga agatgagaaa gtacttggaa
     2101 agctcgccga tgccgaacca aatgactgcg ataggaatca tcgcggtcgg cgagagatag
     2161 cgcatgagct cgatgatcgg atcgagcagg tcgtgcagga gctgcaggcg gccgagcagc
     2221 acgccgaaca cgatcgcagc cagcgaaccg acgacgaagc cgacgagcac gcgcgacatg
     2281 ctgatcgata cgtcggccag gatctcgccg ctgagtatca tgggaatcgc ggtgcggatc
     2341 acctcgagtg gcggcggaat gaggaacgga ttgaaaatga aggtcgacag cacctgccag
     2401 gagaggaaag cgatcgcgat cgatccagcg gtcaggagga agccccggcc cggcatggcg
     2461 gcaaagccgc gcaatgg
//
LOCUS       DATCWM010000468         2461 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_376023, whole genome shotgun sequence.
ACCESSION   DATCWM010000468 DATCWM010000000
VERSION     DATCWM010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2461)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2461)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2461
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_376023"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(240..1700)
                     /locus_tag="VIQ50_09155"
     CDS             complement(240..1700)
                     /locus_tag="VIQ50_09155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009450290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RimK family protein"
                     /protein_id="HEY9360590.1"
                     /translation="MTGWVILVDQPKDLPNAETPHKVITTSEYLARPRLFDMGRPKLV
                     NLARSYAYQSKGYYASLLAEARGHRVMPTVETMLELREAKLYEHALPKLEDELNRCAR
                     RADFQPEGEFKLLVCFGIARDPRFESFGRMLFDWFRCPALEINVEAGAWLSIDRIRPR
                     NITRLANGEASFLREALHQHTKREWRDPKARTVPKYDLAVLYDPNEKMAPSSPASIKH
                     MARIAERLSVDVEPVTRRQLAEIAEYDGLFIRETTSIDNHTYRFARRAWQEGMPVIDD
                     PISMIRCTNKVFLMELLRQNQVAIPPTVMLAEVGDLPKAMDELGLPLVVKIPDGSFSR
                     GVHKVDTPEEFRRVADELFEETDLLLTQKFLPTQFDWRVGVLAGEPLFVCQYRMARGH
                     WQIVKHRPDGSSHEGGFRTFELDKAPSELIDIAVRAARPIGEGFYGVDIKETERGFIV
                     MEVNDNPNLEHGIEDQVGKDEIWTRLLKWFIERFEQ"
     gene            complement(1697..>2461)
                     /locus_tag="VIQ50_09160"
     CDS             complement(1697..>2461)
                     /locus_tag="VIQ50_09160"
                     /inference="COORDINATES: protein motif:HMM:NF023242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase C39 family protein"
                     /protein_id="HEY9360591.1"
                     /translation="AAISRYRKSGYREFGRIRRYYDDGGDALRFEKRLISNSPALAAA
                     PPYFHQTTEFTCGPACIMMALGWADRNFKPAPAFEFQLWREATTIFMTSGPGGCEPYG
                     MAVALKRHGLEPEVYVSHPGPYFLETAQSADKRRVMQVTQLAFQREAQDLAIPTHLTP
                     VSESVLMQAFDGGNVVIVLVSGYHMVPRGKPHWIFAFGRHGRHVLMHDPAAARDHQGM
                     AAAAETYAVPWTAFERVTHLGRERLSAAIVIRKGHA"
BASE COUNT          457 a          747 c          802 g          455 t
ORIGIN      
        1 cggcctccgc cacccaattg gtgccgaagg agaccttatc gagggtctgg ctatgcgcgg
       61 gcgccgccgc gagcatgaaa ccgccagcgg ccacgaaagc ggcgccggcc acctgaccaa
      121 atttcatgac gtatctgcgg gccgtacgat atccagacat agcagctagt atgggcaaac
      181 tcgcctccgc attgggcaaa agctggcgcg cgatttttcc cagcctaccg gtctttagac
      241 tactgctcga accgctcgat gaaccacttg agcagccgtg tccagatctc atccttgccg
      301 acctggtcct cgatgccgtg ctcgaggttc gggttgtcgt tgacctccat gacgatgaag
      361 ccgcgctcgg tctccttgat gtcgacgccg tagaagccct cgccgatcgg ccgcgccgcc
      421 cgcacggcga tgtcgatcaa ctcggatggc gccttatcga gctcgaaggt gcgaaagccg
      481 ccctcgtgcg aggaaccgtc gggtcggtgc ttgacgatct gccagtggcc gcgcgccatg
      541 cgatattggc acacgaacag cggttcgccg gccaagacac ccacgcgcca gtcgaattgg
      601 gtcggcaaga atttctgcgt cagcaggaga tcggtttcct cgaacagctc gtcggcgacg
      661 cgacgaaatt cctcaggcgt atccaccttg tgcacgccgc gcgagaacga gccgtcggga
      721 atcttcacca ccagcggcag gccgagttcg tccatcgctt tcggcaggtc gccgacttcg
      781 gcgagcatca cggtcggcgg gatggccacc tggttttgcc gcaacagttc catcaggaaa
      841 actttgttgg tgcagcggat catggagatc gggtcgtcga tgaccggcat accttcctgc
      901 caagcgcgcc gagcaaagcg gtaggtgtga ttgtcgatcg aggtggtctc gcggatgaac
      961 aggccgtcat actcggcgat ctcggcgagc tggcggcggg tcaccggttc gacgtcgacc
     1021 gaaagcctct cggcgatacg cgccatgtgc ttgatcgagg ccggcgaaga gggcgccatc
     1081 ttctcgttgg ggtcgtagag cacggcgagg tcgtatttcg ggaccgtgcg ggccttgggg
     1141 tcgcgccact cgcgcttggt atgttggtgc agcgcttccc gcaggaacga tgcttcgccg
     1201 ttggcgagcc gggtgatgtt gcgcgggcgg atgcggtcga tcgagagcca agcgccggcc
     1261 tcgacgttga tctcgagcgc cggacaacgg aaccaatcga acagcatgcg tccgaatgat
     1321 tcgaagcgtg gatcgcgggc aatgccgaag cagaccagga gcttgaactc gccttccggc
     1381 tggaagtcgg cgcggcgtgc acagcggttg agctcatcct ccagcttcgg cagcgcatgc
     1441 tcgtagagct tggcctcgcg caactccaac atcgtctcga cggtcggcat gacgcggtgg
     1501 ccacgcgctt ccgccagcag cgaagcgtag tagcccttcg actgataggc ataggagcgc
     1561 gccagattga cgagcttcgg ccgtcccatg tcgaacaggc gaggacgggc gagatactcg
     1621 ctcgtcgtga tcaccttgtg cggcgtctca gcgttgggga ggtctttggg ctggtcgacc
     1681 agaatgaccc agccggtcat gcatgtcctt tccggatgac gatggccgca ctcagccgct
     1741 cgcgacccag atgggtcacg cgttcgaacg cggtccacgg gaccgcgtaa gtctcggcag
     1801 cggctgccat cccttggtga tctctggcgg ccgccggatc gtgcatgagc acatgacgtc
     1861 cgtggcggcc gaaggcaaaa atccagtggg gcttccccct ggggaccatg tgatatcccg
     1921 aaacgaggac aatgaccacg ttccccccat cgaatgcctg catgagaacc gattcgctga
     1981 ctggagtcag gtgggtgggg atagcaaggt cctgcgcctc acgctggaac gcaagttgcg
     2041 tcacctgcat gacgcggcgc ttgtcggcgg actgcgcggt ctcgaggaaa taggggccgg
     2101 gatgactgac atagacctcc ggttcgaggc cgtggcgctt gagcgcgacc gccatgccat
     2161 agggctcgca gccaccgggt cccgaggtca tgaagatggt ggtcgcttcg cgccaaagct
     2221 gaaactcgaa cgcgggcgcc ggcttgaagt tccgatcggc ccatcccagc gccatcatga
     2281 tgcacgcggg cccacatgtg aattcggtgg tctggtgaaa atagggcggc gctgccgcga
     2341 gtgcaggcga gttagaaata aggcgtttct cgaaacgcaa ggcatcgccg ccgtcgtcgt
     2401 aatagcggcg aatacggccg aattcccggt agccgctctt gcggtagcgg gagatcgcgg
     2461 c
//
LOCUS       DATCWM010000469         2569 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_57250, whole genome shotgun sequence.
ACCESSION   DATCWM010000469 DATCWM010000000
VERSION     DATCWM010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2569
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57250"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(121..417)
                     /locus_tag="VIQ50_09165"
     CDS             complement(121..417)
                     /locus_tag="VIQ50_09165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360592.1"
                     /translation="MDRRRTVSETHRGDVEPEIIPPGARDPYSRTSFDGRQRIYVARI
                     GFVGFALMAAAIAALAALFFLLLLGAFVVLLPLAGLALAIIIAVGLFRVLIWRR"
     gene            709..1170
                     /locus_tag="VIQ50_09170"
     CDS             709..1170
                     /locus_tag="VIQ50_09170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEY9360593.1"
                     /translation="MAKLNINGTLRDVEVEPDTPLLWVIREQVGLTGTKYGCGIAQCG
                     ACSVHINDEVQRSCSIRVGDVQATDRIVTIEGLSPDASHPVQKAWAALEVPQCGYCQS
                     GQIMAAAALLKRTPKPSDKDIDEAMTNICRCGTYQRIRAAVHVAANDTSRT"
     gene            1182..>2569
                     /locus_tag="VIQ50_09175"
     CDS             1182..>2569
                     /locus_tag="VIQ50_09175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020095606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY9360594.1"
                     /translation="MKKTICGKAAKLSRRTFIVGSAAAGGGLALGFSLPPGFGRAVAQ
                     TAGEGTEVNAWVLVKPDDTCVIRVARSEMGQGTITGLVQLVAEELECDWKKVKAEQIT
                     PGQNLARKRIWGEMSTGGSRGIRTSEDYVRRGGAVARMLLLQAAAEEWKVPVGELTVA
                     DGVVTHGPSGRSLSYGKLAAAAAKLEAPDPKAIKLKDPKDWKIAGKPMKRIDTADKLD
                     GSKIYGIDIKLPGMLCAAIKDCPVFGGKVASYDEAKIAARPGVRKVVKVNDGAVAVVA
                     DTWWRAKTALDALPIVWDEGPNASVSSASIAEQLKEGLGASITNGDRQNGDALKAIET
                     AAKKVEAVYSTPFLAHATMEPMNATVRLSADKAEVWVPTQNAEASLAALSEASGVPLA
                     NCEAYRPDLGGGFGRRGGTQDYVHQAVAIAKEFPGVPIKLIWSREEDQAHDFFRPISQ
                     CRLTAGLDASGNL"
BASE COUNT          539 a          823 c          818 g          389 t
ORIGIN      
        1 cagtgtcaac ccgctcataa ttttggcgat acgcagcgac ctctcgcctt tccgcaaggc
       61 ggagcatcaa cgaccgtagc gggaatgaag gtagcgaaat ccggctctta agcgccggcg
      121 tcagcggcgc caaatcaata cacggaacaa accgacggcg atgatgatcg ccagagccaa
      181 gcctgccagc gggagcagga ccacgaacgc gcccagcaac aacaggaaaa agagcgccgc
      241 cagcgccgcg atcgccgccg ccatcagcgc gaaaccgaca aagccgatcc tcgccacata
      301 gatgcgctgc ctgccgtcga atgatgtccg cgaataggga tcacgcgcgc cgggcggaat
      361 gatctccggc tcgacatcgc ctcgatgtgt ctccgatacg gttcttcgcc ggtccatgtc
      421 cgcctcgcct ggctagctct cttcgacgca atgtaggcag cgccgcagcg gcgcacaacg
      481 gcaacctcga aagagtgtcg cgaaaagagc caccgctgca actccttcgc cgccgaagtc
      541 ttgcctggcc gcgagcgcgg gcaacatcgc gctaagggcc ataggcaagc tgggacgcga
      601 gcgctatgct gcacgcgcct cgcaggcgct ccaattcctt cattcgccgt cctgcgccgc
      661 ggtaaaacaa taagagaaca atcgatacga ttccccgaga ggatgctcat ggcaaagctc
      721 aacatcaatg gaactttacg tgacgtggag gtggagcccg atacgccact gttgtgggtc
      781 atccgcgaac aggtcggcct caccggcacg aaatacggct gcggcatcgc gcaatgcggc
      841 gcctgctcgg tgcacatcaa tgacgaggtg cagcgctcct gctccattcg cgtcggggac
      901 gtacaagcaa ccgaccgcat cgtcaccatc gaggggctgt ctcccgatgc ctcgcatccc
      961 gtgcaaaagg cgtgggcagc gctcgaagtg ccacagtgcg gctattgcca gtcgggacaa
     1021 atcatggctg ccgcggcatt gctcaagcgc acgccgaagc ccagcgacaa ggacatcgac
     1081 gaggcgatga ccaacatctg tcgatgtggg acctatcagc gcatccgagc tgccgtgcat
     1141 gtggcggcca acgacacgtc gagaacatag ggaggcctac cgtgaaaaag acgatctgcg
     1201 gcaaggccgc taagctttca agacgcacgt tcatcgtcgg atccgctgcc gcaggtggcg
     1261 ggctggcgct tggcttcagt ttgccgcccg gcttcgggcg cgccgtcgcg cagaccgccg
     1321 gcgaaggtac cgaggtcaac gcctgggtcc tggttaagcc cgacgacact tgcgtgatcc
     1381 gcgtcgcgcg ctcggagatg ggacagggca cgatcaccgg gctcgtccag ctcgtggccg
     1441 aagagctcga atgcgattgg aagaaggtca aggccgaaca gatcaccccc gggcaaaatc
     1501 tcgcccgcaa gcggatttgg ggcgagatgt cgaccggcgg cagccggggc atccgcacct
     1561 cggaggacta tgtgcgccgc ggcggcgccg ttgcgcgcat gcttttgctg caagcggcgg
     1621 ccgaggagtg gaaagtgccc gttggcgaac tcacggtcgc cgacggcgtc gtcacccacg
     1681 gcccgtccgg ccgttcgctc agctatggca agctcgccgc ggccgcggcc aagctcgagg
     1741 cgcctgatcc aaaagccatc aagctcaagg acccgaaaga ttggaagatc gccggcaagc
     1801 cgatgaaacg catcgatacc gccgacaagc tcgacggcag caagatctat ggaatcgaca
     1861 tcaagctgcc gggcatgctg tgcgccgcga tcaaggattg cccggtgttc ggcgggaagg
     1921 tggcgagcta tgacgaggcg aagatcgccg cacgcccggg cgtgcgcaag gtcgtgaagg
     1981 tcaacgatgg cgccgtcgca gtcgttgccg atacctggtg gcgggccaaa acggcgctcg
     2041 atgcgctgcc gatcgtgtgg gacgaaggac ccaacgcatc ggtatcgagt gcgagcattg
     2101 ccgagcagct gaaggaaggg ctcggcgcga gcatcaccaa cggcgatcgc cagaacggtg
     2161 atgcgctcaa ggcgatcgag accgcggcca aaaaggtcga ggctgtctac agcacgcctt
     2221 tcctcgccca cgcgaccatg gagcccatga atgccactgt gaggctctcc gccgataaag
     2281 ccgaggtatg ggtaccgacc cagaacgcgg aagcgtcgct cgcggccttg tccgaggcgt
     2341 ccggcgttcc gctcgccaat tgcgaggcct acaggccgga cctcggcggc ggcttcggcc
     2401 ggcgcggcgg cacgcaggac tacgtgcacc aggcggtggc gatcgccaag gaattccccg
     2461 gcgtcccgat caaactgatc tggagccgcg aggaggacca ggcacacgac ttctttcgcc
     2521 cgatctcgca atgtcggctc acggccggtc tcgacgcgag cggcaacct
//
LOCUS       DATCWM010000470         5975 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_149194, whole genome shotgun sequence.
ACCESSION   DATCWM010000470 DATCWM010000000
VERSION     DATCWM010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5975)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5975)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5975
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149194"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..220)
                     /locus_tag="VIQ50_09180"
     CDS             complement(<1..220)
                     /locus_tag="VIQ50_09180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEY9360595.1"
                     /translation="MLDGLSRELDSVAADKRIRAVVLAAHGTAFSAGHDLKELTAHRA
                     DADGGRSYTRHIIERCSTVMLSVLRLPQP"
     gene            489..848
                     /locus_tag="VIQ50_09185"
     CDS             489..848
                     /locus_tag="VIQ50_09185"
                     /inference="COORDINATES: protein motif:HMM:NF022815.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3175 domain-containing protein"
                     /protein_id="HEY9360596.1"
                     /translation="MARKSAASKRSAARKTRGRRQSGSSRRARTGRRWSRHVTEHSDA
                     LTLEKGVFTSRDPKRIAASLKRSAEKSRRRKSNAFRSALSMLTFYINRAGKSLPASRK
                     RNLMRAKDELRKQFGKA"
     gene            989..1433
                     /locus_tag="VIQ50_09190"
                     /pseudo
     CDS             989..1433
                     /locus_tag="VIQ50_09190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007603483.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
     gene            1550..2014
                     /gene="rplM"
                     /locus_tag="VIQ50_09195"
     CDS             1550..2014
                     /gene="rplM"
                     /locus_tag="VIQ50_09195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HEY9360597.1"
                     /translation="MKTFSAKPADIEKKWVLVDATGLVVGRLASVVAMRLRGKHKPTY
                     TPHVDGGDNVIVVNAEKILLTGKKREKKVYRHHTGYIGGIKERTARSILEGKFPERIV
                     EKAVERMLPRGPLGRVQLGNLRVYAGPAHPHAAQNPEPLDVAAMNRKNTRSA"
     gene            2017..2496
                     /gene="rpsI"
                     /locus_tag="VIQ50_09200"
     CDS             2017..2496
                     /gene="rpsI"
                     /locus_tag="VIQ50_09200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HEY9360598.1"
                     /translation="MAETMQSLDQLSALKPAAAPETPKYVQKLDKQGRAYATGKRKDA
                     VARVWVKPGAGRITINTRDVEAYFARPVLRMLIQQPLVAANRTGQYDVTCTVSGGGLS
                     GQAGAVRHGLSKALMNYEPDLRAALKRGGFITRDPRVVERKKYGKAKARRSFQFSKR"
     gene            complement(2602..4011)
                     /gene="glnA"
                     /locus_tag="VIQ50_09205"
     CDS             complement(2602..4011)
                     /gene="glnA"
                     /locus_tag="VIQ50_09205"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HEY9360599.1"
                     /translation="MTTAKDVMKLIKDNDVKYADLRFTDPRGKWQHVTVDITTVDEDT
                     FSEGIMFDGSSIAGWKAIHESDMQLMPDPESACIDPFYAETTLVLVCDTLEPLTGEPY
                     NRDPRSIAKKAEGLVKSMGVGDTVFFGPEAEFFIFDDVKFSATPYNTGFKLDSVEFPT
                     NSDTDYEGGNLGHHIGFKKGYFPVPPLDTAQDMRSEMLGAMARMGVKVEKHHHEVGSA
                     QHELGMKFATMVKMADQTQIYKYCIQQVAQIYGKTVTFMPKPVYGDNGSGMHCHQSIW
                     KDDKPTFAGNKYADLSETALHYIAGIIKHARTINAFTNPTTNSYKRLVPGFEAPVLLA
                     YSVRNRSASCRIPLASSPKGRRIEVRFPDPLANPYLGFAAMLMAGLDGIKNKLNPGSP
                     IDKDLYDLPPAELKQIPTVCGSLREALGYLDKDRDFLKNGGVFDDDFIDSYLDLKMTE
                     VIRFEHTPHPVEFEMYYSA"
     gene            complement(4075..4413)
                     /locus_tag="VIQ50_09210"
     CDS             complement(4075..4413)
                     /locus_tag="VIQ50_09210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEY9360600.1"
                     /translation="MKKIEAVIKPFKLDEVKEALQEVGLQGITVTEAKGFGRQKGHTE
                     LYRGAEYVVDFLPKVKIEIVLGDDMVEKAIEAIRRAAQTGRIGDGKIFVSNIEEAIRI
                     RTGESGLDAI"
     gene            4688..>5975
                     /locus_tag="VIQ50_09215"
     CDS             4688..>5975
                     /locus_tag="VIQ50_09215"
                     /EC_number="5.1.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate epimerase"
                     /protein_id="HEY9360601.1"
                     /translation="MLELLTTAEMAEADRRTIAAGVAGIDLMENAGRAVAEAIAARHP
                     PGVHVAIVVGPGNNGGDGFVAARILAERGYRARILLLGGSSRLKGDAAIAAQRWRGPS
                     ATAAPGALMPADVVVDALFGAGLDRPVEGAARAMIEAMNVQSCVYAIDLPSGINGTSA
                     AVMGLAVKAKETVTFFRRKIGHALLPGRLHCGTVRVADIGIPATVLDHLRPRAWTNAP
                     ERWRESFPLPRVDGHKYSRGHAVIVSGGLASTGAARLAARGALRAGAGLVTIATPREA
                     LAVNAAATLAVMVRPVDGAPELSEFLNDRRRNVVVLGPGGGVGRPMRELVLTALAGER
                     AVVLDADALTSFAEEPQTLFAVTRSRATATVMTPHEGEFSRLFSALSLEVRSKLEKAR
                     NAAQETGAVVLLKGPDTVVAAPDGRATIAENAPPWLA"
BASE COUNT         1073 a         1803 c         1952 g         1147 t
ORIGIN      
        1 ccggctgcgg cagccgcagg accgagagca tcacggtgct gcagcgctcg atgatgtgcc
       61 gcgtgtagct gcgtccgcca tccgcgtcgg cacggtgcgc ggtcaattcc ttaaggtcat
      121 gaccggcgga gaaagcggtc ccgtgggctg cgagcaccac ggcgcgaatg cgcttgtccg
      181 cggcaacgct gtcgagttca cgagacaggc cgtccaacat tgcctcggat aagctgttgc
      241 gggcctgcga gcggttgagc gtgagaacgg ctatgttgcc gatcgtgtcc cgcaacagcg
      301 gcggttcgct tgtcgccccg gtaggtttgg cacgagcggg ggattgactt gtcataggct
      361 tgcgagcccg gaaaccgtcc atctaccctc cctacttagc gcgtcgggcg ggcggcgcaa
      421 gcggccgggg aacaggtcct cagccggcgc gtttaggccg acgaggcgta ttgcggcatg
      481 gtgatgcaat ggcgaggaaa tctgctgcga gcaaaaggag tgccgcccgc aagacgcgcg
      541 gccgccgcca gagcggctcg tcgcggagag ctcggacggg ccggcgctgg tcgcgtcatg
      601 tgaccgaaca tagcgacgcg ctcaccctcg agaagggcgt tttcacctcg cgcgatccca
      661 agcggattgc agcgtccttg aagcgatcgg ccgagaaaag caggcgccgc aagtccaacg
      721 catttcgctc cgcgctgtcc atgctcacgt tctacatcaa ccgtgccggc aagagtctgc
      781 cagcctcccg caagaggaac ttgatgcggg ccaaggacga gttgcgcaag caattcggca
      841 aggcatgagt cccacgcgcc ggcaaagagc gtggacatgg acatacctta ggccgtgggg
      901 gatccccgcg cagacctaag tcgcctttcg cgcagacctt ttcatttgtc cgcaatcgtc
      961 tagttctgtt gcgccgggag ggcggcgcat gccggtcgcg atgacagtcg aggagcttga
     1021 gcgctttctt cgcagcgagt ttccgcaagg ttttcatccc gacagcgggc tcggcattga
     1081 agccgtgtgg gagcgcggct gtcgggtacg ccaggcgttc cgccacagtt cgatacggcc
     1141 gggcggcacg atctccggtc cgaccatgat ggcgctcgcc gattttgcca tgtatgtatg
     1201 tggcggtgct cgccgccatc ggcccggtac cgctggccgt gaccatcaac ctcaacatca
     1261 actttttgcg caaagccgcg ccgcgcgacc tcctggctga ggcgcggctg ctcaggatcg
     1321 gcaagcgcct cgcgactggg gaagtcacga tttgctcgga tggcgagaag gagccagtgg
     1381 cgcatgtgac gtccacctat tcgatcccgc cggacggtat tatagaacca taaccccaag
     1441 tgattgaatt aagcggaaat aattggatgc cgcgttgacg gacggggtgt cccggtgtat
     1501 gagccgcaac cacgacgcct tccttggcca acagtacgga cgctgtgcca tgaaaacctt
     1561 ttcggccaag ccggccgata tcgagaaaaa atgggtgctc gtcgacgcca cgggcctagt
     1621 tgtcggcagg ctggcaagcg ttgtggcaat gcggctgcgc ggcaagcaca agccgaccta
     1681 taccccgcat gtcgacggcg gagacaatgt catcgttgtc aacgcggaaa aaatcctgct
     1741 caccggcaag aagcgcgaga agaaggtcta ccgccatcac accggctaca tcggcggcat
     1801 caaagagcgc accgcacgtt cgatcctgga gggaaagttt cctgagcgga tcgtggagaa
     1861 ggcggtcgag cgcatgctgc cgcgcgggcc gctgggccgt gtccagctcg gcaacctgcg
     1921 cgtctacgcc ggcccggcgc atccgcatgc ggcgcagaac ccagagccgc tcgatgtcgc
     1981 cgccatgaac cgcaagaata cgaggagcgc gtgaccatgg ccgaaaccat gcagtcgctc
     2041 gatcaactgt cggcgctcaa gccggctgcc gcgcccgaga cgccgaaata cgtgcaaaag
     2101 cttgacaaac agggccgcgc ctatgccacc ggcaaacgca aggatgcggt ggcgcgggtt
     2161 tgggtcaagc cgggcgccgg caggatcacc atcaacacgc gcgacgttga ggcgtatttc
     2221 gcgcggccgg tgctgcgcat gctgatccag cagccgctgg tggcggccaa tcgcaccggt
     2281 caatacgacg taacgtgcac ggtttcgggc ggtggattgt ccggccaagc aggtgccgtt
     2341 cgccacggcc tttccaaggc gttgatgaat tacgaaccgg atctgcgcgc cgcgttgaag
     2401 cgcggcggct tcataacccg cgatccgcgc gtggtcgaac gtaagaagta cggcaaggcc
     2461 aaagcgaggc gttcgttcca gttctccaaa cgctgagttt tgtgttggtg gagcggtccg
     2521 ggtgaccttg tcacgccggc aaagaaaggg cgcccgcagg cgcccttttc agttgcatcg
     2581 ctgtgcgatg cgaggaggac gctacgccga atagtacatt tcgaactcga ccgggtgggg
     2641 tgtgtgctcg aagcggatga cctcggtcat cttcaggtcg agatagctgt cgatgaagtc
     2701 gtcgtcgaat accccgccgt tcttgaggaa gtcgcggtcc ttgtcgagat aaccgagtgc
     2761 ctcgcgcagc gagccgcaca cggtggggat ttgcttgagc tccgccggcg gcagatcgta
     2821 gaggtccttg tcgatcggcg agcccgggtt gagcttgttc ttgatgccgt cgaggccggc
     2881 catcagcatc gcggcaaacc cgagataggg attggcgagc ggatccggga agcggacctc
     2941 gatgcggcgg ccctttggcg aagaggcgag gggaatacgg cacgaggccg agcggttgcg
     3001 caccgaataa gccagcaaca ccggcgcctc gaagccgggg accagtcgct tataggagtt
     3061 ggtggtggga ttggtgaacg cgttgatggt acgtgcatgc ttgatgatgc cggcgatgta
     3121 gtgcagtgcc gtttccgata gatcggcata tttgttgccg gcgaacgtcg gcttgtcgtc
     3181 cttccaaatc gactgatggc agtgcatccc cgagccgttg tcaccgtaga ccggcttggg
     3241 catgaaggtg acggtcttgc cgtagatctg cgcgacctgc tggatgcaat atttatagat
     3301 ctgcgtctgg tcggccatct tcaccatggt cgcgaacttc atgccgagtt cgtgctgcgc
     3361 ggagccgacc tcgtggtgat gcttttcgac cttgacgccc atgcgggcca tggcaccgag
     3421 catttccgag cgcatgtcct gcgccgtgtc tagcggcggc accgggaagt agcccttctt
     3481 gaaaccgatg tggtggccga ggttgccgcc ttcgtagtca gtgtccgagt tggtcgggaa
     3541 ttcgacggag tcgagtttga aaccggtgtt gtaaggcgtt gccgaaaatt tcacgtcgtc
     3601 gaagatgaaa aactcggcct ccggcccgaa aaacacggtg tcgcccacgc ccatagactt
     3661 gaccaggcct tcggccttct tcgcgatcga gcgcgggtcg cgattgtacg gctctccggt
     3721 cagcggctcg agcgtgtcgc ataccagcac cagcgtcgtt tccgcgtaga acggatcaat
     3781 gcaggcgctc tccgggtcgg gcatgagctg catgtcggat tcgtggattg ccttccagcc
     3841 tgcaatcgac gagccgtcga acatgatacc ttcgctgaaa gtgtcttcgt cgacggtcgt
     3901 gatatcgacc gtgacgtgct gccacttgcc gcgtgggtcc gtgaaacgca gatcagcgta
     3961 cttcacgtcg ttgtccttga tcagtttcat cacgtctttg gcggtcgtca tgaacgaata
     4021 ccctttcgtc tgctggtcgt aagggccggc gggaaacgtg cgcgcagccc cagttcagat
     4081 ggcgtccaat ccggattccc cggttctgat ccgaatggct tcttcgatat tggagacgaa
     4141 gatcttgccg tcaccgatcc ggccggtttg ggcggcgcgg cggatcgcct cgatggcttt
     4201 ctcgaccatg tcgtcgccga gcacaatctc gatcttcacc ttgggaagaa aatcgacgac
     4261 gtattcggct ccgcgataaa gctcggtgtg tcctttctgg cgtccgaagc ctttggcttc
     4321 cgtcacggta atgccttgca gtccgacctc ctgcagcgcc tcctttacct cgtcgagttt
     4381 gaagggcttg atcaccgcct cgatcttctt catcgcgttt ccttcccctg gcgtgccggc
     4441 ggtgaccgcc agcgtggccg cgccaacggt tagcagggtc cgtgccaagc gcgaaccgac
     4501 caaaaaccgg ctgccggcca gtaatttagc cgacgtcggg tgcggcgatg cgcttgcggc
     4561 gatcaccccc gcgattacaa tttgagcaat ttgcctattt tgtgatcatt ggcgactatc
     4621 ccgcgctggg aacgaaggaa ttgccgcgga gtcgcgcgcg ccagccgggg ccattactgt
     4681 tcagccaatg ctcgaattgc tcaccactgc cgagatggca gaagcggacc ggcgcaccat
     4741 tgcggcgggc gttgccggga tcgacctcat ggaaaatgcc gggcgcgccg tggccgaggc
     4801 gatcgctgcc cgccatcctc ccggcgttca cgtcgcaatt gttgtgggac cgggcaataa
     4861 tggaggcgat ggctttgttg ccgcgcgtat tcttgccgag cgcggatacc gcgcgcgaat
     4921 tcttctgctc ggcggctcca gtcgactcaa aggcgatgcc gcgatcgccg cgcagcgttg
     4981 gcggggtcct tccgcaaccg ccgcgccggg agccctgatg ccggcggacg ttgtcgtcga
     5041 tgcgttgttc ggagctggcc tggatcgccc ggtggaaggc gccgcgcggg cgatgatcga
     5101 ggcgatgaac gttcagtcct gcgtctatgc gatcgatctg ccgagcggga tcaatggcac
     5161 cagcgccgca gtgatgggcc tcgcggtcaa ggccaaggaa acggtgacgt tcttccgtcg
     5221 caagatcggc catgcgttgt tgccgggccg gctccactgc ggaaccgttc gcgtggccga
     5281 catcggaatt ccggcaaccg tactcgatca cctccggccg cgcgcctgga ccaacgctcc
     5341 ggaacggtgg cgcgagagct ttccgttgcc gcgcgtcgac ggccacaaat attcccgcgg
     5401 acacgcggtc atcgtttctg gcgggctcgc ctcgacgggc gcggcgcggc ttgccgcccg
     5461 cggcgctttg cgggcgggcg cgggccttgt gacgatcgcc acgccgcgcg aagcgctggc
     5521 ggtcaacgcg gcagcgacct tggcggtgat ggtgcgcccg gtcgatgggg cccctgaact
     5581 ttcggagttt ctgaacgatc gacgccgcaa tgtcgtcgtg ttgggaccag gcgggggagt
     5641 cggtcgcccg atgcgagaat tggttctcac tgcgcttgcc ggcgagcgcg cggtcgtgct
     5701 cgacgccgat gccctcacca gtttcgccga ggagccgcag acgctgttcg cagtcaccag
     5761 gtcacgagcg acggccacag taatgacccc tcacgagggg gaattcagtc gcttgttcag
     5821 cgcgctcagc ttggaagttc gctcgaaact tgagaaagct cgtaacgcgg ctcaagagac
     5881 gggagccgtg gtcctgctta agggcccgga cacggtggtc gccgcccccg acgggcgggc
     5941 aaccatcgcc gagaatgcgc cgccatggct cgcca
//
LOCUS       DATCWM010000471         2006 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_138278, whole genome shotgun sequence.
ACCESSION   DATCWM010000471 DATCWM010000000
VERSION     DATCWM010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138278"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..463
                     /locus_tag="VIQ50_09220"
     CDS             <1..463
                     /locus_tag="VIQ50_09220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360602.1"
                     /translation="NIKVVNTGGFGARLKALLDGEVEAASLLPPQIAMAEQLGLRAII
                     ADTFKTLWWVPDHFESEIVRAYLRALERAEQAMDANMEEYLPLWRLTIPSEFESYHRW
                     DFAKFGRGERFYYRALPREEFEDTLAQVERWGLDQYLKDRSYETLSYSAPS"
     gene            580..>2006
                     /locus_tag="VIQ50_09225"
     CDS             580..>2006
                     /locus_tag="VIQ50_09225"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEY9360603.1"
                     /translation="MKNINQNPFTTRPEIDGTFGVVTSTHWIATAVGMATLEKGGNAF
                     DAAAATAFTLQVVEPHLNGPGGDVPIILNDVRTGKTEVICGQGPAPANATIAHYKSLG
                     LDMVPGTGLLAACVPGTFETWMLLLRDYGTMRLSDVLAPAINYAGQGYPLVERTQATI
                     ATVEALFREHWPSSAAVYLPGGKVPEAGALFTNKTLAETYTRILREAERAGGDRVTQI
                     EAARKSWSQGFVAEAIDRFCRTQAVMDTSGEPHRGVLTGEDMARWRPHIEAPLTYDYG
                     RYTVCKPGPWSQGPVMLQQLALLKRFHLDRVDPLSADFVHLLVECSKLAYADREKFYG
                     DPDFVEVPMATLLSDAYNEERRKLVGEDASLELRPGSVAGFGAVVKLRREEGERRAVG
                     GMGAGEPTVGRLGEMRGDTVHFDIIDAAGNIVSATPSGGWLHSSPVIPELGFCLGTRA
                     QMFWLEEGHPAALAPGKRPRTTLSPT"
BASE COUNT          341 a          666 c          659 g          340 t
ORIGIN      
        1 aaacatcaag gtggtgaaca ccggtgggtt cggtgcgcgg ctcaaggcgc tgctcgacgg
       61 ggaggtcgag gcggcgagcc tactgccgcc acagatcgca atggccgagc agctgggatt
      121 gcgcgcgatc atcgccgaca ccttcaagac gctgtggtgg gttccggacc attttgagtc
      181 ggaaatcgtg cgcgcctatc tgcgcgcgct cgagcgtgcc gagcaggcga tggacgcgaa
      241 catggaggaa tatctaccgc tctggcggct cacgatcccg tctgaattcg agagctacca
      301 tcggtgggac ttcgccaaat tcggccgcgg cgagcggttc tattatcgcg cgctgccgcg
      361 cgaggaattc gaggatacgc tggcacaggt cgagcgttgg ggtctcgatc agtatctcaa
      421 ggatcgcagc tacgagacgc tgagctattc ggcaccctcc taggcgcgca cgggccgatt
      481 acgctacgct catccccgtt acgactggtc cggtcgtatc ggatcatcgg ggcgcccgta
      541 cactggcgtt catcgcccat cccgttcgca aggtcatcaa tgaaaaacat caatcaaaat
      601 cccttcacta cgcggcccga gatcgatggc acgttcggcg tggtcacctc gacccattgg
      661 atcgccaccg ccgtcggcat ggcgacattg gagaaaggcg gcaacgcctt cgatgccgcg
      721 gccgccaccg cattcacgct gcaggtggtc gagccgcacc tcaacggacc cggcggcgac
      781 gtgccgatca ttctcaatga cgtgcgcacc ggcaagaccg aggtgatctg cggccagggt
      841 ccggcgcccg cgaacgcgac catcgcgcat tacaagagcc tcggcctcga catggtgccg
      901 ggcaccggcc tgctcgctgc ctgcgttccc ggcacgttcg agacctggat gctgttgctg
      961 cgcgactacg ggacgatgcg gctttccgac gtgctcgcgc ccgcaatcaa ctacgcgggc
     1021 caaggctatc ctctggtcga acgcacgcag gcgacgatcg ccacggtgga ggccctcttc
     1081 cgtgagcatt ggccgagctc ggccgcggtc tatctgccgg gcggtaaggt gccggaggcc
     1141 ggcgcgctgt tcacgaacaa gacgctggcc gagacctata cgcgcatcct gcgcgaggcc
     1201 gaacgcgccg gcggggaccg cgtcacgcag atcgaagcgg cgcgcaagag ctggtcgcag
     1261 ggcttcgtcg ccgaggcgat cgaccgcttc tgccgcacgc aggcggtgat ggacaccagc
     1321 ggcgaacccc atcgcggcgt gctcaccggc gaggacatgg cgcgctggcg tccccacatc
     1381 gaggcgccgc tcacctacga ctacggccgc tacaccgtct gcaagcccgg cccgtggtcg
     1441 caaggtccgg tcatgctgca gcagctggcg ctgctcaagc gtttccatct cgaccgcgtc
     1501 gaccccttga gcgccgattt cgtgcacctt ctggtcgagt gctcgaagct cgcctatgcc
     1561 gatcgtgaaa aattctacgg cgatcccgat tttgtcgagg tgccgatggc gacgctgctt
     1621 tccgatgcct acaacgaaga gcggcgaaaa ctcgtcggcg aggacgcctc gctcgaattg
     1681 cgtccgggat cggtcgcggg cttcggcgcc gtggtgaagc tgcggcgcga ggaaggggag
     1741 cgccgcgcgg tcggcggcat gggtgcgggc gagccgaccg tcggccgcct cggcgagatg
     1801 cgcggcgata ccgtgcattt cgacatcatc gatgcggccg gcaatatcgt atcggcgacg
     1861 ccgtccggcg gctggctgca ctcctcgccg gtcatcccgg agctcggctt ctgcctcggc
     1921 acccgcgcgc agatgttttg gctggaggag gggcatcccg ccgcgctcgc ccccggcaag
     1981 cggccgcgca cgacactttc gcccac
//
LOCUS       DATCWM010000472         2306 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_402952, whole genome shotgun sequence.
ACCESSION   DATCWM010000472 DATCWM010000000
VERSION     DATCWM010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2306
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_402952"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..333
                     /locus_tag="VIQ50_09230"
     CDS             <1..333
                     /locus_tag="VIQ50_09230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360604.1"
                     /translation="SSQRAQTAALGVFGAPGSKDHYGWVALARRQSGSWEPHFNGYAI
                     SDTSLPPSGTILSAKIMLPVWSEPQAGANDQSKLHSRLPSGACVRVLSTRGGSGRLWA
                     EVAPASCS"
     gene            complement(368..>2306)
                     /locus_tag="VIQ50_09235"
     CDS             complement(368..>2306)
                     /locus_tag="VIQ50_09235"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF012789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HEY9360605.1"
                     /translation="GQVNREAGYDGEYGVIRLFEAKELARLTAGELLFDAPVSRRRPA
                     EAAKPPVKALADSGESVAPARPRLRLVSNQATAGGGFLAQLDADQRSAAEAVDGPLLI
                     IAGPGSGKTRTLTYRIAHLVAERGVAPEACLAITFTRRAAAEMRNRLAALLPDRADQV
                     AIHTFHSLGLSFLREHANAAGLRPGFRVAGESERAALIAATLNLSGREAQRLLRTISR
                     EKRTHGGVSGGADEATTAYARALAERNWIDFDDLVTLTARALAHHTDLAAHYRDRWQW
                     VSVDEFQDLDEQQYRLLRLLAPAGSNLCAIGDPNQAIYGFRGADASGFERFRQDYPGA
                     RTVRLARNYRSSGSIVTASAQVIGSSPSEPIAEVVRDMYERVAIHTAASERAEAESVV
                     AAIEQMIGGHSFFSIDSGRAMPAAQRQHAFADFAVLYRTESQAAPLCEAFERSGIPYK
                     KNSHRPLADEPAVRALLQELGDSQGATLADELRAAAERLAERGDAGATIALQRLTALA
                     RSCGNDPMRLKDTAALTTDAEFWDARADRVSLLTLHAAKGLEFAVVFIVGLEDGLLPL
                     RWDEADEAAMAEERRLFYVGMTRAKDRLFLSHARHRLWRGRVRMRDPSPFLRDIEAEL
                     VKHLPAQGGRAKPQERQLKLL"
BASE COUNT          381 a          786 c          771 g          368 t
ORIGIN      
        1 tcatcacagc gtgcgcaaac cgccgcgctt ggcgtttttg gtgcgcccgg ctcgaaggac
       61 cactacggct gggtcgcgct cgctcgccgc caatccggat cgtgggagcc gcatttcaac
      121 ggctacgcca tctccgacac ctcattgccg ccttccggca cgattttgtc cgccaagatc
      181 atgctgccgg tttggtccga gccgcaggcc ggcgccaacg atcagagcaa gctgcacagc
      241 cgcctgccgt ccggcgcctg cgtgcgcgtg ctgtcgactc gcggcggcag cggtcgattg
      301 tgggccgaag tcgcgcccgc ctcatgctcg tgagggaaaa agtcgggctt ggccgactcg
      361 ccgatcacta aagcaatttg agctgacgct cctgcggctt ggcacgcccg ccctgcgcgg
      421 gcaggtgctt caccaactcg gcttcgatat cgcgtaggaa cggcgacggg tcgcgcatgc
      481 gcacgcggcc gcgccaaagg cgatggcgtg cgtggctaag aaacagccgg tccttggcgc
      541 gcgtcatgcc gacatagaac aggcgacgct cctccgccat cgccgcctcg tccgcctcgt
      601 cccaacgcag cggcagcagg ccgtcctcca atcccacgat aaacaccacc gcaaactcga
      661 ggcccttcgc cgcatgcaag gtcaggagcg acacgcggtc ggcgcgcgca tcccagaact
      721 ccgcgtcggt ggtgagcgcg gccgtgtcct tgaggcgcat cggatcattg ccgcacgatc
      781 gagcaagcgc ggtaaggcgc tgcaacgcga tcgtggcgcc cgcatcgccg cgctcggcca
      841 gcctttcggc ggccgcgcgc agctcgtccg cgagcgttgc gccctggctg tcgccgagtt
      901 cctgcaacag cgcccgtacc gccggctcgt ccgccagcgg ccgatgggag ttcttcttgt
      961 aaggaatacc ggaacgctcg aacgcctcgc acagcggcgc cgcctgggac tccgtgcggt
     1021 agagcaccgc gaagtcggcg aatgcgtgct gcctttgcgc cgcgggcatg gcgcggccgc
     1081 tgtcgattga gaaaaagctg tgcccgccga tcatttgttc gatcgccgcg acgacggatt
     1141 cggcctcggc gcgctccgag gccgcggtat ggatggcgac gcgctcgtac atgtcgcgca
     1201 ccacttcggc gatgggctcg cttggagaag atccgattac ctgcgcggag gcagtgacga
     1261 tgctgccgct ggagcggtag ttgcgggcaa gccgcacggt ccgggcaccg gggtaatcct
     1321 gccggaagcg ctcgaagccc gacgcatcgg cgccgcgaaa gccatagatc gcctgattgg
     1381 gatcgccaat ggcgcaaagg ttcgacccgg cgggcgccag caacctgagc agccggtact
     1441 gttgctcgtc gagatcctgg aattcgtcga ctgagaccca ttgccaacgg tcgcgatagt
     1501 gcgcggcgag atcggtatgg tgcgccaagg cgcgggccgt aagcgtgacg agatcgtcga
     1561 agtcgatcca attgcgctcg gcgagcgcgc gtgcgtacgc cgtggtcgcc tcgtccgcgc
     1621 ccccgctcac gccgccatgc gtccgcttct cgcgcgaaat cgtgcgcaag agccgctgcg
     1681 cctcgcgccc ggaaagattg agtgtcgcgg cgatgagggc ggcgcgttcg gattcgcccg
     1741 cgacgcgaaa accggggcgc agcccggccg cgtttgcgtg ctcgcgcagg aaggaaaggc
     1801 cgagcgaatg gaaggtgtga atcgcaactt gatcggcgcg atcggggagg agtgccgcca
     1861 agcggttgcg catttcggcg gcagcgcggc gggtaaacgt aatggcaagg caagcctcgg
     1921 gagcaacccc gcgctcggcg acgagatggg cgatgcgata ggtcagcgtg cgggtcttcc
     1981 ccgatccggg acctgcgatg atcaacagcg gcccgtcgac cgcttcggcc gccgagcgct
     2041 ggtcggcatc aagctgcgcg aggaaaccac cgccagccgt cgcttgattg ctcaccagcc
     2101 gcaaccgcgg ccgcgccggc gcaacgctct cgccactatc ggctaaggcc ttgacgggcg
     2161 gctttgccgc ttcggccggc cttcgtcgcg agaccggcgc gtcgaacaac aactcgccgg
     2221 cggtcaagcg cgcaagctcc ttcgcctcga acaggcggat cacgccgtat tcaccgtcat
     2281 agcccgcctc gcggttcacc tgtccg
//
LOCUS       DATCWM010000473         6112 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_510894, whole genome shotgun sequence.
ACCESSION   DATCWM010000473 DATCWM010000000
VERSION     DATCWM010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6112
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_510894"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..910)
                     /locus_tag="VIQ50_09240"
     CDS             complement(<1..910)
                     /locus_tag="VIQ50_09240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9360606.1"
                     /translation="MRAMSSALSAVTLRRRDFLQLVAGAAVLGAASTLARAQSYPTRP
                     VHWIVSFTAGGPNDTVARIIGQYLADRLGQQFVIENKVGAGGNIGMAAALSSPPDGYT
                     IGFVAPNNAINTSLYGNLPFDFIRDSVPVAGTMLLTNVMVVHPDVPAKTVAEFIAYAK
                     ANPGKINMASSGSGTSVHMSGELFKAMTGVNMQHVPYRGSAPAMQDLLTNRVQVMFDN
                     LPGSMAHIKAGTLRALGVTAGKRAQALPDVPTIGETVPGYEAVIWYGIVAPKGTPPEV
                     VDTLNTAVNAVLADSKLKARLAELGGE"
     gene            complement(926..1312)
                     /locus_tag="VIQ50_09245"
     CDS             complement(926..1312)
                     /locus_tag="VIQ50_09245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HEY9360607.1"
                     /translation="MPQISVTINGRQFRMACENGEEARLTNLAADLDARIATLRARFG
                     EIGDTRLTVMAALAVADELSEVREKLARLEPELATLQEASVISADRGQATQAAVVAAL
                     NAAAERIESLTKRLNQTVADATVPMG"
     gene            complement(1320..1601)
                     /locus_tag="VIQ50_09250"
     CDS             complement(1320..1601)
                     /locus_tag="VIQ50_09250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4164 family protein"
                     /protein_id="HEY9360608.1"
                     /translation="MTEASAIDAASKRLALALDALAAAVERRHEADRGEQTLDDQLHA
                     LGTDRSRLAAELDAAAARNRALESANREVARRLDAAIDTIRSVLAVNAR"
     gene            1941..3908
                     /gene="tkt"
                     /locus_tag="VIQ50_09255"
     CDS             1941..3908
                     /gene="tkt"
                     /locus_tag="VIQ50_09255"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEY9360609.1"
                     /translation="MANALRVLAMDAVEQAKSGHPGLPMGAADIATVLFTRFLKFDPA
                     DPAWPDRDRFVLSAGHGSMLLYALLHLLGYEKMTIEEIKRFRQLGSITPGHPENFVTP
                     GVETTTGPLGQGLGNSVGMAIAERHLAAAFGPGLVDHRTYVLASDGDLMEGVSQEAIA
                     LAGHLKLNKLTVLFDDNGISIDGPLSLADSVDQVKRFEAAGWAATRIDGQDPEAIARA
                     LAQAQSCDRPSLIACRTTIGFGAPTKAGTEKTHGSPLGSEEIKGARERLGWPEPAFVI
                     PAEVREMWRSAGRAGAEAHQAWRARLNAAPAPRRSEFERRIRGELPKDQLIAAVRSVK
                     EKLAATPKDVATRAASETALEALTAAVPEMIGGSADLTGSNNTRPKGMTVLSAADYSG
                     RFIHYGVREHGMAAAMNGIALHGGIIPYSGTFLVFSDYCRPAIRLGALAGERVIYVMT
                     HDSIGLGEDGPTHQPVEHLAALRAIPNLHVFRPCDAVETVECWQLALERSRSPSILAL
                     TRQNMPQLRLGFEETNRCAAGAYEIVPAEKGAEVSLFATGSEVSIAAEACKLLRERGV
                     SARVVSVPCFELLRERPASERTQIVGRAKVKVAVEAAVRQGWDEIIGSDGAFVGMTGF
                     GASAPYKDLYKHFGITAEKVAETALSNLGKA"
     gene            4006..5013
                     /gene="gap"
                     /locus_tag="VIQ50_09260"
     CDS             4006..5013
                     /gene="gap"
                     /locus_tag="VIQ50_09260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0019682 - glyceraldehyde-3-phosphate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEY9360610.1"
                     /translation="MSVRVGINGFGRIGRNVLRAIAEAARNDIEVVGINDLAPVETNA
                     HLLRFDSVHGRFPGEVTVKGDTINIGNGTIKVTAVKDPATLPWRELGVDVALECTGIF
                     TSREKAAAHLAAGAKRVVISAPADGADLTVVYGVNHDKLTPEHKVVSNASCTTNCLAP
                     VAKVLNDAVGIDKGFMTTVHSYTNDQPSLDQVHKDLYRARAAAINMIPTSTGAAKAVG
                     LVLPELAGKLDGVAIRVPTPNVSVVDFKFVAKRATTKDEINGAVKRAAEQQLKGILGY
                     TEAPNVSSDFNHDAHSSVFAMDQTKVMDGTLVRVMSWYDNEWGFSNRMVDTAVAMGKL
                     I"
     gene            5084..>6112
                     /locus_tag="VIQ50_09265"
     CDS             5084..>6112
                     /locus_tag="VIQ50_09265"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018406314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEY9360611.1"
                     /translation="MFRTLDQADVRGKRVLVRVDLNVPVENGKITDTTRIERVAPTIT
                     EIADKGGKVILLSHFGRPKRPDPTQSLERIVPTLADILERPVAFAQDCVGERAAAAVN
                     AMKPGDILCLENTRFHAGEEGNDPAFAAQLAALGDLFVNDAFSAAHRAHASVEGIARR
                     LPSYAGRAMQDELEALTKVLHSPMRPLAAIVGGAKISTKLDLLGNLLAKADILIIGGG
                     MANTFLAARGHCVGKSLCERDLLPTAREILNKAADKGREIVLPVDAVVAKTFAANAPS
                     RVVAVDAVGEDEMILDIGPRSIEHVCSVLARVKTLVWNGPFGAFELEPFDIGTVEIAE
                     AAAELTAAG"
BASE COUNT         1047 a         2015 c         1998 g         1052 t
ORIGIN      
        1 gctcgccgcc aagctcggca agccgcgcct tgagcttgga atcggcaagg accgcgttca
       61 ccgccgtgtt gagcgtgtcg accacctcgg gtggcgtgcc cttgggcgcc acgatcccat
      121 accaaatcac cgcctcatag ccaggcacgg tttcgccgat ggtcggcaca tccggcagcg
      181 cctgcgcgcg cttgcccgcc gtcactccga gcgcgcgcaa cgtgccggcc ttgatgtggg
      241 ccatcgaacc cgggaggttg tcgaacatca cctggacgcg gttggtgagc aggtcctgca
      301 tcgcaggggc cgagccgcgg tagggcacgt gttgcatgtt gacgccggtc atcgccttga
      361 acaattctcc cgacatgtgc accgaggtcc cgctgcccga ggaggccatg ttgatcttgc
      421 ccggattagc cttggcgtaa gcaatgaact cggcgacggt ctttgccggc acgtcggggt
      481 gcaccaccat cacattggtc agcagcatcg tccccgcgac cggcacgctg tcgcgaatga
      541 agtcgaacgg aaggttccca tagagcgagg tattgatcgc attgttggga gcgacaaagc
      601 cgatcgtata gccgtcgggc ggcgagctca gcgccgccgc catcccgatg tttccgcccg
      661 cgccgacttt gttttcgatg acgaattgct ggcccaagcg atccgccagg tattgtccga
      721 tgatgcgggc caccgtgtcg ttcggtccgc cggccgtgaa cgatacgatc caatgcactg
      781 ggcgagttgg atagctttgc gccctagcaa gggtcgaggc ggctcccagc acggcagcgc
      841 ctgcgaccag ctgtagaaag tcacggcggc gaagtgtcac ggcggacaga gcggaactca
      901 ttgcgcgcat aaatgaatcc ctccctcagc ccattgggac ggttgcatcg gccactgtct
      961 gattgagacg cttggtgagg ctctcgatgc gctcggccgc cgcgttgagg gcggcgacca
     1021 ccgctgcctg ggtcgcctgg ccgcggtccg cggatatcac gctcgcctcc tgcagcgtgg
     1081 cgagttcggg ctcgagccgg gccagctttt ccctcacctc cgagagttcg tcggcgaccg
     1141 ccagtgcggc catgaccgtg agccgcgtgt cgccgatctc accgaagcgc gcgcgcagcg
     1201 ttgcaatgcg cgcatcgaga tccgcggcaa gattggttag gcgcgcctct tcgccgttct
     1261 cgcaagccat cctgaattgg cggccgttga tggtgacgct gatctgcggc atgacaccct
     1321 cagcgtgcgt tgactgcgag caccgagcgg atcgtatcga tcgcggcatc gagccgccgg
     1381 gcgacctcac gattggcgct ttccagcgcc cggttgcgcg ccgccgcggc atcgagttcc
     1441 gcggcaaggc gcgagcggtc ggtgccgagc gcgtgcagtt ggtcgtccag cgtctgttcg
     1501 ccgcggtcgg cttcgtgccg ccgctcgacc gcagccgcca gcgcatcgag cgcaagggca
     1561 agacgtttgc tggccgcatc gatggcgctt gcttcggtca ttctctgcga ccctttggct
     1621 cggccgatta catagcggat tcgtcagccg tgtggccgaa aaaatctttt gcgtgcgcaa
     1681 gcggttagaa tgagaagcct acgttgcgtg cgggctggcc gtcaacgctt cgcccgaatc
     1741 cacctcgccg cttgtgaatg gcgcgcgcgc cacgcgccag cgttctttga ctcctctcgc
     1801 ccgcgtgcta gagcctcgcc caagaagcgc ttagccaggc gatgaccaat cccaattcgc
     1861 tccttgctgc agcggcatcc aatgcccaaa ccgtccgctg ggacgagcgc gcagcgccgc
     1921 cgcgcgcgcg gcatgaccgc atggcaaacg cgttgcgcgt gctcgccatg gacgcggtcg
     1981 agcaggccaa atccggtcat cccggtctgc ccatgggcgc ggccgacatc gcaaccgtgc
     2041 tgttcacgcg cttcctcaag ttcgacccgg ccgatcccgc ctggcccgac cgcgaccgct
     2101 tcgtgctatc ggcggggcac ggctcgatgc tgctctacgc gctgctccat ctgctcggct
     2161 acgagaagat gacgatcgaa gagatcaagc gcttccgcca gctgggctcg atcacccccg
     2221 gtcatccaga gaacttcgtt acgccgggcg tggagacaac gactggtccg ctcggacagg
     2281 gactaggcaa ttccgtgggc atggcgattg ccgagcgcca tctcgccgcc gcgttcggcc
     2341 ccggattggt cgatcaccgc acctacgtgc tcgcctcgga cggcgacctg atggaaggcg
     2401 tgagtcagga ggcgatcgcg ctcgccgggc acctcaagct caacaagctc accgtgttgt
     2461 tcgacgacaa cggcatctcg atcgacgggc cgctgtcgct ggcggattcc gtcgatcagg
     2521 tcaagcgttt cgaggctgcc ggctgggcgg cgacgcgcat cgatgggcag gatccggagg
     2581 cgatcgcccg ggcgctcgcg caggcgcagt cctgcgatcg gccatcgctg atcgcctgtc
     2641 gcaccaccat cggtttcggc gcgccgacca aggctggtac ggagaaaacc cacggttcgc
     2701 cgctcggcag cgaggaaatc aaaggcgcgc gggaacgact cggctggccg gaacctgcct
     2761 tcgtcattcc cgccgaggtg cgcgagatgt ggcgcagcgc aggacgcgcg ggcgcggagg
     2821 cgcaccaggc ctggcgcgcg cgcctcaacg ccgcaccggc gccccgtcgc tccgaattcg
     2881 agcgccgcat ccgcggcgag ttgccgaagg accagctcat cgcggctgtg cggtcggtga
     2941 aggaaaagct tgcggcgaca ccgaaggacg tcgcaacccg cgccgcctcg gagactgcgc
     3001 tcgaagccct gaccgccgcg gtgccggaga tgatcggcgg ctccgccgat cttaccggct
     3061 ccaacaacac caggcccaag ggcatgacgg tcctctccgc cgccgattat tccggtcggt
     3121 ttatccacta tggcgtgcgc gagcacggca tggccgcggc catgaacggc atcgcgctgc
     3181 acggcgggat cattccctat tccggtacgt tcctcgtgtt ctcggattat tgccgcccgg
     3241 cgatccgtct gggcgcgctc gcgggcgagc gcgtcatcta cgtgatgacg cacgactcga
     3301 tcgggctcgg ggaagacggc ccgacgcacc agccggtcga gcatctcgcc gcgctgcgcg
     3361 ccatcccgaa cctccatgta ttccgcccat gcgacgcggt cgaaaccgtg gaatgctggc
     3421 agctcgcgct tgagaggtcg cgttccccga gtattcttgc gcttacgcgc cagaacatgc
     3481 cgcagttgcg ccttggcttt gaggagacca accgctgcgc cgcgggcgcc tacgagatcg
     3541 ttcccgcgga gaagggggcc gaggtgtcgc tgttcgccac cggctccgag gtttccattg
     3601 cggccgaggc gtgcaaattg ctgcgcgagc gcggcgtctc ggcgcgcgta gtgtcggtac
     3661 cctgcttcga gcttctgcgc gagcgtcccg cgtccgagcg gacgcaaatc gtcggcaggg
     3721 ccaaggtcaa ggtcgcggtc gaggcggcgg tgcggcaagg ctgggacgag atcatcggct
     3781 ctgacggcgc tttcgtggga atgaccggat tcggggcgag cgcgccgtac aaggatctct
     3841 acaagcactt cggcatcacg gcggagaagg tcgccgagac ggcgttgagt aacctgggaa
     3901 aggcttaaac agcgggcggc aagcactatc tacgcgttac atgctcccgc gcagcggtgt
     3961 ccgccaaggc agggagcgcc acggagggga gtgaaggagc cgggaatgtc agttcgagtc
     4021 gggatcaacg ggttcggtcg tatcggtcgc aacgtgctgc gcgccattgc cgaagcggcg
     4081 cgtaacgaca tcgaggtcgt cggcatcaac gatctcgccc cggtcgagac caacgcccat
     4141 ctcttgcgct tcgattcggt gcacggccgc tttccgggcg aggtcacggt caagggcgac
     4201 acgatcaaca tcggcaacgg caccatcaag gtgactgccg tcaaggaccc ggcaacgctg
     4261 ccgtggcggg aactcggcgt cgacgtcgcg ctcgagtgca ccggcatttt cacgtcgaga
     4321 gagaaggccg ccgcgcacct tgccgccggc gcaaagcgcg tggtcatctc ggcgcccgcc
     4381 gacggcgccg acctcacggt cgtctatggc gtcaatcacg acaagctcac gccggagcac
     4441 aaagtcgttt ccaacgcctc atgcaccacc aactgcctgg cgccggttgc caaagtgctc
     4501 aacgacgccg tcggcatcga caaaggcttc atgacgacgg tgcattccta caccaacgac
     4561 cagccctcgc tcgaccaggt gcacaaagat ctctatcgcg cgcgcgccgc ggcgataaat
     4621 atgatcccga cctccaccgg cgcggccaag gccgtcgggc tggtgctgcc ggagcttgcc
     4681 ggcaagctcg acggcgtggc gatccgggtg cccacgccca acgtgtcggt tgtcgacttc
     4741 aagttcgtcg ccaagcgcgc gaccacaaag gacgaaatca acggcgcggt gaagcgcgcc
     4801 gccgagcagc agctcaaagg catcctcggg tataccgagg cgccgaacgt ctccagcgat
     4861 ttcaatcacg atgcccactc gtcggttttt gccatggatc agaccaaggt gatggacggc
     4921 acgctggtgc gcgtgatgtc gtggtacgac aacgaatggg gcttctccaa ccggatggtc
     4981 gacaccgcgg tggcgatggg caagctgatc tgattttgcc ggacgatgag cgatagtttc
     5041 gttgcggcgg ttcgatgtcg caccatcgga cggacgggct gagatgttcc gcaccctcga
     5101 ccaggccgac gtcaggggga aacgcgtgct cgtgcgcgtc gatctcaacg tgccggtcga
     5161 gaacggcaag atcacagata cgacccgcat cgagcgggtc gctccaacca ttacggagat
     5221 cgcggacaag ggcggcaagg tgatcctgct ctcccatttc gggcgcccga agcggcccga
     5281 tccgactcaa tcgctcgagc gcatcgtgcc gactctcgcc gatattctcg agcgcccggt
     5341 ggcgttcgcg caggattgcg tcggtgaacg cgccgcggcg gcggtgaacg ccatgaaacc
     5401 tggcgacatc ctgtgcctgg aaaacacccg cttccatgcc ggcgaggagg gcaacgatcc
     5461 ggcttttgcc gcgcaactgg ccgcgctcgg cgacctcttc gtcaatgatg ccttttccgc
     5521 ggcgcaccgc gcccatgcgt cggtcgaggg catcgcccgc agattgccga gctatgccgg
     5581 ccgcgccatg caggatgagc tcgaggcgct cacaaaagtg ttgcactcgc cgatgcgtcc
     5641 gctggcggcg atcgtcggcg gagctaagat atcgaccaag ctcgacctgc tcggcaatct
     5701 gctcgccaag gcggacatcc tcatcatcgg cggcggcatg gccaacacct ttctcgcggc
     5761 gcgtggacat tgcgtcggca aatcgttgtg cgagcgcgat ctcctgccga cggcgcgcga
     5821 gatcttgaac aaggccgctg acaaaggccg tgaaatcgtg ctgccggttg acgctgtggt
     5881 cgccaaaacc ttcgcggcga atgcgccctc gcgcgtggtc gcggtggacg ccgtcgggga
     5941 ggatgagatg atcctcgaca tcggcccgcg cagcatcgag catgtctgct ccgtgctcgc
     6001 ccgcgtgaag acgctggtct ggaacgggcc gttcggcgcg ttcgaactcg agcctttcga
     6061 catcggcacg gtggagatcg ccgaagcggc ggcggaactc acggccgcgg gg
//
LOCUS       DATCWM010000474         2427 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_268057, whole genome shotgun sequence.
ACCESSION   DATCWM010000474 DATCWM010000000
VERSION     DATCWM010000474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2427)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2427)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2427
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_268057"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..903)
                     /locus_tag="VIQ50_09270"
     CDS             complement(<1..903)
                     /locus_tag="VIQ50_09270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013913318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEY9360612.1"
                     /translation="MSAIATPAMTSPRQMSEAQLDQLSINCIRTLSIDAVQQAKSGHP
                     GTPMALAPLVYTLWNRVMRFDPQDPIWPNRDRFVLSNGHASMLLWSVLHLTGTRAVNA
                     EYERLGQPAVSLDDIRHFRQLGSKAPGHPEYHLVSGVEATTGPLGQGVATSVGMAIAE
                     AWLANRYNRPGFEIFDYNIYAVCGDGCMMEGVSSEAASLAGHLALGNLCWIYDNNHIT
                     IEGNTRIAFTEDIAARFLGYGWNVLRVGDANDLERIEQALDIFHKTKGRPTFIILDSH
                     IGYGSPHKQDTAAAHGEPLGKEEIV"
     gene            complement(906..1619)
                     /gene="pgl"
                     /locus_tag="VIQ50_09275"
     CDS             complement(906..1619)
                     /gene="pgl"
                     /locus_tag="VIQ50_09275"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: protein motif:HMM:TIGR01198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017057 - 6-phosphogluconolactonase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HEY9360613.1"
                     /translation="MKIEVYPDDNVVARKAATIVADAARAAVAARGRFVMAVSGGHTP
                     WVMLRALAGEDLPWKEVHVVQTDERLAPAGDPDRNLVHLRESLLDHAPLSFDHVHPMP
                     VEAADVDHAAKQYASTLREVAGSPPVLDLVHLGLGPDGHTASLVPGDPVLDVADADVA
                     VTGLYQGRRRMTLTFPMINRSRLILWLVTGGEKAEALAHLRDGDRSIPGSRVRSDRAL
                     VLADRAAADRLDNNEQLEA"
     gene            complement(1666..>2427)
                     /gene="gnd"
                     /locus_tag="VIQ50_09280"
     CDS             complement(1666..>2427)
                     /gene="gnd"
                     /locus_tag="VIQ50_09280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011653425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004616 - phosphogluconate dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating 6-phosphogluconate
                     dehydrogenase"
                     /protein_id="HEY9360614.1"
                     /translation="GDILIDGGNSYYVDDIRRAQELTSKGINYVDVGTSGGVWGLERG
                     YCMMIGGPEAAVRHLNPIFKTLAPGAGDIPRTPGSESIGGTAELGYLHCGASGAGHFV
                     KMIHNGIEYGIMAAYAEGMSILRHANVGEQQHAVDAETTPLRNPELYRYDLNLRDIAE
                     VWRRGSVIASWLLDLTATALTEDPALANFAGKVSDSGEGRWTIKAAIDAAVPVPVLST
                     ALYERFSSRGEAQFGDKLLSAMRYEFGGHLEKTAG"
BASE COUNT          419 a          758 c          805 g          445 t
ORIGIN      
        1 aacgatttcc tcttttccca gcggttcgcc gtgcgcggcg gcggtgtcct gcttgtgcgg
       61 cgagccgtaa ccgatatggc tgtccagaat gatgaatgtc gggcgaccct tggtcttgtg
      121 aaagatatcc agcgcctgct cgatgcgctc gaggtcattg gcgtcgccga cgcgcaaaac
      181 gttccacccg tagccgagga agcgggcggc gatgtcctcg gtgaaggcga tgcgcgtgtt
      241 gccttcgatg gtgatgtggt tgttgtcgta gatccagcaa aggttaccga gggcgagatg
      301 gccggccaac gaggccgctt ccgaactcac gccctccatc atgcagccgt cgccgcaaac
      361 cgcgtagatg ttgtagtcga agatttcgaa gccgggacgg ttgtagcggt tggcgagcca
      421 ggcctcggcg atggccatgc ccacgctggt agcgacgcct tgcccgagcg gaccggtcgt
      481 cgcctcgact ccggaaacca agtggtattc ggggtggccc ggcgccttgc tgccgagttg
      541 gcggaaatga cggatatcgt cgagcgaaac cgcgggttgc cccagccgct catattcggc
      601 gttgacggcg cgcgtgccgg tgagatggag caccgaccac agcagcatcg aagcatggcc
      661 gttggagagc acgaagcggt cgcgattggg ccaaatcgga tcctgcggat cgaagcgcat
      721 gaccctgttc cacagggtgt agacgagcgg cgccagcgcc atgggcgtgc cgggatggcc
      781 ggatttcgcc tgttgcacag catcgatcga cagcgtgcga atgcaattga tcgacaattg
      841 gtccagttgt gcctcgctca tctggcgggg tgaagtcatc gcgggggtgg cgatagcact
      901 cattcttacg cctccaattg ttcgttgttg tcgagccgat cggctgccgc gcggtcggcg
      961 agcaccagcg cgcggtcgga acgcacgcgc gagcccggaa tggaacgatc gccatcgcgc
     1021 aggtgcgcga gtgcctcggc cttctcgccg ccggtcacca gccacaggat gagccgcgac
     1081 cggttgatca tcggaaacgt cagcgtcata cggcgccggc cctggtaaag gccggtcacg
     1141 gcgacatcgg cgtcggcgac gtcgaggacc ggatctccag gcaccagcga agcggtgtgg
     1201 ccatcgggtc cgaggccgag atgaacgaga tcgagcaccg gcggggagcc ggccacctcc
     1261 cgcagcgtcg aggcgtattg cttggccgcg tgatccacat ccgctgcttc gaccggcatc
     1321 ggatggacgt gatcgaagga aagcggcgca tgatcgagca ggctttcgcg cagatggacg
     1381 aggtttcggt cgggatcgcc cgccggcgcg aggcgctcat cggtctgaac aacatgcacc
     1441 tccttccagg gaagatcttc gccggccaat gcgcgcagca tcacccacgg cgtgtggccg
     1501 ccgctgaccg ccatgacgaa gcgtcctcgt gcggcaaccg ccgcgcgcgc tgcgtccgcg
     1561 acgatcgtcg ccgccttgcg ggcgacgaca ttgtcatcgg gatagacttc gattttcacg
     1621 cgatggcctc cggctacgcc ggccagtctc gatacatatc cgcgttcagc ccgcggtttt
     1681 ctccaggtga ccgccgaatt cgtagcgcat ggcggaaagg agcttgtcgc caaactgcgc
     1741 ttctccgcgc gagctgaaac gttcgtagag cgcggtcgaa agcacgggca ccggcacggc
     1801 ggcgtcgatc gcggctttga tcgtccagcg tccttctccg gaatcggaga ccttgccggc
     1861 aaaattcgcg agcgcgggat cctcggtcag cgcggtggcg gtaagatcga gcagccaaga
     1921 cgcaatgacg ctgccgcgcc gccatacttc tgcgatgtcg cgcaagttga gatcgtatcg
     1981 atagagctcg gggttgcgca gcggcgtcgt ttccgcgtcg accgcatgct gctgctcgcc
     2041 cacgtttgcg tggcgcagaa tgctcattcc ttcggcatag gcggccatga tgccgtactc
     2101 gatgccattg tggatcatct tgacgaagtg accggccccg ctcgcgccgc aatgcaggta
     2161 cccgagctcg gcggtgccgc cgatactctc gctcccgggc gtgcgcggga tgtcccccgc
     2221 gccaggggcg agcgtcttga agatcggatt gagatgccgc acggccgctt ccggtccgcc
     2281 gatcatcatg cagtagccgc gctccaggcc ccacaccccg ccgctggtcc cgacgtccac
     2341 atagttgatc cccttcgacg tgagctcttg ggcgcggcgg atgtcgtcga catagtagga
     2401 attgccgccg tcgatgagga tatcgcc
//
LOCUS       DATCWM010000475         5275 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_235492, whole genome shotgun sequence.
ACCESSION   DATCWM010000475 DATCWM010000000
VERSION     DATCWM010000475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5275
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_235492"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            338..679
                     /gene="yajC"
                     /locus_tag="VIQ50_09285"
     CDS             338..679
                     /gene="yajC"
                     /locus_tag="VIQ50_09285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HEY9360615.1"
                     /translation="MFVTPAFAQASPFGGDSIWVQLLPFVLIFVIMYLLILRPQQKRA
                     KEHQELIKNLRRGDTVITSGGLVGKVTKVVDDDQIEVEIADGVRVRQMRGMVSGVRAK
                     GEPVKDEGGSS"
     gene            711..2318
                     /gene="secD"
                     /locus_tag="VIQ50_09290"
     CDS             711..2318
                     /gene="secD"
                     /locus_tag="VIQ50_09290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HEY9360616.1"
                     /translation="MLYISKWKATAILLTALVCCLFAVPNFFPESTVKRWPEWAQRHI
                     VLGLDLQGGSHILLEVDANDVRRQKLLALQDDVRRVLREARIGLTRAPVIRGSSVEVA
                     IRENDLQQGLAKLRELAQPLGGFVGSTGARSIDIENVGGGVARLTPTEPALLERIRQA
                     VDQSVEILGRRVNAMGLVEPSIQRQGNDRILVQVPGLGDPQQLLEILGKTAKLTFRLV
                     DTSMPVEQALQGRPPPESEIVYGSEAERSQPYLLEKRVIVSGDELTDAQPGFDQRTSE
                     PIVTFKFNTSGARKFAQVTQENVGRPFAIVLDDKVISAPVIREPILGGSGQISGNFTV
                     ESANNLAILLRAGALPAKLTVIEQRVVGAGLGQDSIEKGKLASYFGAALVVVFMIVTY
                     GLFGVFASIAVAVNVGMIFGILSLLNATLTLPGIIGIVLTIGIAVDSNVLIYERIREE
                     VRTGRTPITAIDAGFTRALATILDSNITTFIAAAVLFFFGSGPVRGFAVTLGIGIVTT
                     VFTAFTLTRLIVAWWVRWARPRQLAIS"
     gene            2330..3301
                     /gene="secF"
                     /locus_tag="VIQ50_09295"
     CDS             2330..3301
                     /gene="secF"
                     /locus_tag="VIQ50_09295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HEY9360617.1"
                     /translation="MRLHHSIPLLRIVPDDTKFDFMRFRRISFPVSAALSILAIFLYF
                     FHGLNFGIDFVGGTLIEVQSKSGPADLAKMRATLSGLSLGDVQLQEFGGPTNVLIRVA
                     QQPGGEQAQQVAINKVREALGNEVDYRRVEVVGPRVSSELLAKSTIGLGLAIFGILIY
                     LWFRFEWQFSLGAMIANVHDLVLTIGYMSLTQIDFDLSSIAALLTILGYSLNDTVVIY
                     DRIREMLRRYKRMSMPDLLNISVNSTLSRSIITHVTVTLALLALLLFGGHAIHSFVAT
                     MIFGVVLVGTYTSVFIAAPILIYLGVGTTRMEAEDSAAKGKASTTQS"
     gene            3365..4210
                     /locus_tag="VIQ50_09300"
     CDS             3365..4210
                     /locus_tag="VIQ50_09300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene/phytoene synthase family protein"
                     /protein_id="HEY9360618.1"
                     /translation="MQDAFAHCEGLVRAADRDRFLTTLFAPAEHRPALLALYAFNLEI
                     ARVREIVHEPLAGEIRLQWWNDMLEGERRGEVAAHPVAAVLLASVARYRLGPERLKAL
                     IAARRFDLDNEPMRSLGDLEAYAEGASAGLIAVAAQVLADGLDIGALSHHAGLAHAFA
                     GLLAAFPVYAVRGKVFVPLDILARHGAAREDAVGGPATPQLHAALAELRLHARVHLRA
                     AQELLDAAPPAAIPALLPVALAGGMLARMERRGYDPFTPIEVAPWRRQLRIWRAARSP
                     RRIFR"
     gene            complement(4213..5268)
                     /locus_tag="VIQ50_09305"
     CDS             complement(4213..5268)
                     /locus_tag="VIQ50_09305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009799711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein kinase"
                     /protein_id="HEY9360619.1"
                     /translation="MESRWTAGVVLKRDPLSTVERGRFDSGSGDVEAVLRRIDEVPWW
                     SVAVARHLFARERRALAIAGELGIAPPLLFTGRGALIRGWIDGLPLHIAKPHGEDTFF
                     RSAKASLRKLHRAGICHNDLAKEQNWLRGRDGRAYLTDFQLAARFPRRSFLFRIAAYE
                     DLRHLLKHKRRYAPDALTAAERRVLAKKSLLTRVWMATGKKLYYSITRDVLNVADREG
                     GGTRLIHDAPRIVARLKAHPQVREAVVAAFPDRRAGTGLYAFVEGDSALTERGLREFL
                     ATETAEKAPPKLPEHLQVTERLPRTASGEVRREILELVAMNQVDLIEPLIANEDERGL
                     VAHIVADRRNLRDRFAF"
BASE COUNT          875 a         1705 c         1712 g          983 t
ORIGIN      
        1 tgggggcaag ccgttccagc gcgcgggcga tgcgctcgac aatggcctcg gaatcggcgg
       61 ctggcgcggc gctgcgttca cgcgaggacg gtttttggac gcgtttggcc atggcatgca
      121 atggtgcgcg ccgcaccctt accggggccc cggcggcgct gcaagatcag cttgcgggag
      181 ggcgaaatcg gccggattcc cacggcaaac cagcgttgca attgaggccc cggccgctat
      241 agtccgcgcc gatttcgttg ctgcaatcga ctgtagcggc gcccgcgcgc ggcgcgtcac
      301 aagacgcacg ctagacccgg acataaagga ccaagcgatg ttcgtgacgc ccgctttcgc
      361 ccaggcgagc ccgttcggcg gcgacagcat ctgggtgcag ttgctgcctt tcgttctgat
      421 tttcgtcatc atgtatctct tgatcctgcg gccgcagcaa aagcgcgcga aggaacacca
      481 ggagctgatc aaaaacttgc gccgcggcga taccgtcatt acctccggtg ggctcgtcgg
      541 caaggtcacc aaagtggtgg acgacgatca gatcgaggtc gagatcgccg acggggtacg
      601 ggtgcgtcag atgcgcggga tggtgtctgg cgtgcgtgcc aaaggcgagc cggtcaagga
      661 cgagggcggt tccagctgag gaccggccaa cgcgtcaacc gggataatcc atgctctata
      721 tctcgaagtg gaaagcgacg gcgatcctgc tcaccgcgct cgtgtgctgt ttgttcgccg
      781 tgcccaattt cttccccgag agcacggtca agcgatggcc ggaatgggcg cagcgccaca
      841 tcgtgctagg cctcgatctg cagggcggct cccacatcct gctcgaggtc gacgccaacg
      901 atgtgcgccg gcagaagctc ttggcactgc aggacgacgt ccgccgggtt ctacgcgagg
      961 cgcgcattgg tctcacccgc gctcccgtga tccgtggcag ttcggtcgag gtcgccattc
     1021 gcgagaacga tctgcagcag ggattggcga agctcagaga gctggcacag ccgctcggag
     1081 ggttcgtcgg cagcaccggc gcgcgctcga tcgacatcga gaacgtcggc ggcggggtgg
     1141 cccggctcac ccccacggaa cctgccctgc ttgaacgcat ccggcaggcc gtcgatcaat
     1201 ctgtcgagat tctcgggcgg cgcgtgaatg cgatgggttt ggtcgaacca tcgatccagc
     1261 gccaaggaaa cgatcgcatc ctggttcagg tgccgggtct cggcgatccc caacagctcc
     1321 tcgaaattct cggcaagacc gccaagctga cgttccgcct cgtcgacacg tcgatgcccg
     1381 tcgagcaggc gctgcagggg cgaccgcccc cggaatcgga aatcgtctat ggttcggagg
     1441 cggagcgctc gcaaccctat ctgctcgaga agcgtgtgat cgtgtccggt gacgagctca
     1501 ccgatgcgca gcccggcttc gaccagcgca cgagcgagcc gatcgtcacg ttcaagttca
     1561 atacctccgg cgcgcgcaaa tttgcacagg tcacccagga gaacgtcggc cggccatttg
     1621 caatcgtgct cgacgacaag gtcatctccg ctcccgtcat ccgcgagccg attctgggcg
     1681 gcagcggtca gatctccggc aatttcaccg tagaatccgc gaacaatctc gccattcttc
     1741 tgcgcgccgg cgcgcttccg gccaagctga ccgtgatcga acagcgcgtg gtgggcgcgg
     1801 gcctgggaca ggactcgatc gagaagggta agctcgcctc ctatttcggc gccgcgctcg
     1861 tcgtcgtgtt catgatagtg acctacgggt tgttcggggt gttcgccagc atcgccgttg
     1921 ccgtcaacgt gggcatgatc ttcggtattt tgtcgctgct caatgcaacg ctcaccttgc
     1981 cgggcatcat cggcatcgtg ctcacgatcg gaatcgccgt cgacagcaac gtgctgatct
     2041 atgagcgcat ccgtgaggag gttcgcaccg gccgcactcc catcaccgcg atcgacgccg
     2101 ggttcacgcg cgcgctcgcg accatcctcg actcgaacat cacgaccttc atcgcggcgg
     2161 cagtgctgtt cttcttcggt agcggacccg tgcgcggttt cgccgtaacg ctcggaatcg
     2221 gcatcgtgac gaccgtcttc accgccttca ccctgacgcg gttgatcgtc gcttggtggg
     2281 ttaggtgggc gcgtccgcgg cagctggcca tttcataggc ggtgcccacg tgcggctgca
     2341 tcactccatc ccgctgctgc ggatcgtccc cgacgacacc aagttcgact tcatgcgctt
     2401 ccgccgcatc agcttcccgg tgtcggcggc gctgtcgatc ctcgccattt tcctctactt
     2461 ctttcacggg ctgaacttcg gcatcgactt tgtcggcgga acgctcatcg aggtgcagtc
     2521 gaagagcggg ccggccgatc tcgccaagat gcgtgcgacc ttgagcggcc ttagcctcgg
     2581 agacgtgcag ctgcaggaat tcggcggccc gaccaacgtg ctgatccgtg tcgcgcaaca
     2641 gccgggcggc gaacaggcgc agcaggtcgc gatcaacaag gtgcgcgagg ccttgggcaa
     2701 cgaggtcgac tatcgccgcg tcgaggtcgt cggtccgcgg gtatcctcgg agctcttggc
     2761 caagagcaca atcggtctgg ggctcgcgat cttcggcatc ctgatctatc tctggttccg
     2821 attcgaatgg cagttctctc tcggcgccat gatcgccaac gtgcacgatc tggtgctgac
     2881 gatcggctac atgtcgctga cccagatcga tttcgatcta tcgagcatcg cggcgctgct
     2941 caccattctc ggctactcgc tcaacgatac ggtggtcatc tacgaccgca tccgcgaaat
     3001 gctgcgtcga tacaagcgca tgtccatgcc ggacctgctc aatatctcgg tgaattcgac
     3061 actgtcacgc tcgatcatca ctcacgtcac ggtgacgctt gctttgctcg cgctgcttct
     3121 gttcggcggg catgccattc atagtttcgt ggcgactatg atcttcggcg tggtgctggt
     3181 cggcacctat acctcggtct tcattgccgc cccgatcctg atctatctcg gcgtcggcac
     3241 gacccgcatg gaagccgagg actcagcagc gaaagggaag gcgtcgacca cacagtcata
     3301 agctggccgg gaagctgaca gcgcgtgagc tcgcgcaaag ctcggtggca ccatgaccta
     3361 acccatgcag gatgcattcg cccattgcga ggggctcgtc cgcgcggcgg atagggatcg
     3421 ctttctcacc accttgtttg cgcccgctga gcatcggccg gcgctgctcg ccctctacgc
     3481 gttcaacctg gaaatcgccc gcgtgcgcga gatcgtgcac gagccgcttg caggggagat
     3541 ccggctgcaa tggtggaatg atatgctcga gggggagcgg cggggcgagg tcgcggcgca
     3601 tccggtcgcg gcggtgctgc tcgcaagtgt ggcgcgctat cgactgggcc cagagcggct
     3661 gaaggcgctc atcgcggcgc gcaggttcga tctcgacaac gagccgatgc gtagccttgg
     3721 cgatctcgaa gcctatgcgg agggtgcatc cgccggcctc atcgcggtcg cggcgcaggt
     3781 cctcgccgat ggactcgata tcggtgcgct gagccatcat gccggccttg cccacgcgtt
     3841 tgccggactg ctggccgcat ttcccgtcta cgctgtgcgc ggaaaagtgt tcgttccgct
     3901 ggacattctg gcgcgccacg gagccgcgcg ggaggatgcc gtgggcgggc cagcgacgcc
     3961 gcaactgcac gcggcgctgg cggaattgcg cctgcatgcg cgcgtgcacc tgcgcgcggc
     4021 gcaggaactg ctcgacgcgg cgccgcccgc cgccatccca gcgctgttgc cggtcgcgct
     4081 cgccggaggg atgctcgcgc gcatggagcg gcgcggctat gatccgttta cgccgatcga
     4141 ggttgcgccg tggcggcggc aattgcgcat ttggcgcgcg gccaggtcgc cgcgccgcat
     4201 cttccgctga gcctagaagg cgaatcgatc gcgcaggttg cggcggtcgg ccacgatatg
     4261 cgcaaccagg ccgcgctcgt cctcatttgc gatcagcggt tcgatcagat cgacctggtt
     4321 catcgcgacg agttcgagga tctcgcggcg cacctctccc gaagccgtcc gtggcagtcg
     4381 ttcggtcacc tgcagatgct cgggcagttt gggcggtgcc ttctccgccg tctcggtggc
     4441 gaggaattcg cgcaagccgc gctcggtcag cgcagagtcg ccttcgacga aggcatagag
     4501 gccagtgccg gctcttcggt cgggaaaggc cgccaccacc gcctcgcgca cctgcgggtg
     4561 cgccttaagc cgcgcgacga tgcggggcgc gtcgtgaatg agccgcgtcc cgccgccctc
     4621 gcggtcggcg acgttgagca catcgcgggt gatcgagtag taaagcttct tgccagtcgc
     4681 catccaaacg cgcgtcaaca ggcttttctt cgccagcacg cgccgttcgg cggcggtgag
     4741 cgcatcgggc gcatagcgcc gcttatgctt gagcaggtgc cgcagatcct cataggccgc
     4801 gatgcggaag agaaaggacc tccgcgggaa acgggcggca agttggaagt cggtgagata
     4861 ggcgcgcccg tcgcgtccgc gcagccagtt ttgctccttg gcgagatcgt tgtgacagat
     4921 gcccgcgcga tggagcttgc gcaagctcgc cttggccgag cggaagaagg tgtcctcgcc
     4981 gtgcggtttg gcaatgtgca gcggcagacc gtcgatccat ccgcggatca gcgcaccgcg
     5041 accggtgaac agcagcggcg gcgcaatgcc gagttcgccg gcgatcgcca gcgctcgccg
     5101 ctcgcgtgcg aacagatggc gcgccacagc aacgctccac cacgggactt catcgatgcg
     5161 gcgcagcacc gcctcgacgt cgccggagcc gctgtcgaag cgcccgcgtt caaccgtcga
     5221 aagcgggtcg cgcttgagca ccacgcccgc cgtccagcgg ctctcgatgt cgcgc
//
LOCUS       DATCWM010000476         2561 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_19656, whole genome shotgun sequence.
ACCESSION   DATCWM010000476 DATCWM010000000
VERSION     DATCWM010000476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2561)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2561)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2561
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19656"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..240)
                     /locus_tag="VIQ50_09310"
     CDS             complement(<1..240)
                     /locus_tag="VIQ50_09310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360620.1"
                     /translation="MKTAYTISGIGHAAVLLWSVWSLAANPLPVSSTEGLPVDLITVS
                     EFSNIAAGSKSAPKTETPKPLVEKVAEAKPVEDPTA"
     gene            complement(257..712)
                     /gene="tolR"
                     /locus_tag="VIQ50_09315"
     CDS             complement(257..712)
                     /gene="tolR"
                     /locus_tag="VIQ50_09315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014492405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098567 - periplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0061024 - membrane organization [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein TolR"
                     /protein_id="HEY9360621.1"
                     /translation="MAMNGGTAAVAGRRHRRRPVMAEINVTPMVDVMLVLLIIFMVSA
                     PLLTVGVPLELPQTQAKSLDQDKEPLTVSVKANGQIYLQNTEISAEELVPKLKAITEA
                     RRGAEERIFVRGDRQLEYGTVMKVMGSISAGGFHRVALVTESEQQASAR"
     gene            complement(723..1403)
                     /gene="tolQ"
                     /locus_tag="VIQ50_09320"
     CDS             complement(723..1403)
                     /gene="tolQ"
                     /locus_tag="VIQ50_09320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011666084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein TolQ"
                     /protein_id="HEY9360622.1"
                     /translation="MPSAAPLSIWDLFQNADLVVKLVMVGLLVASVMVWAIAIEKLVL
                     YSRTRRAMDGFEQAFWSGQSLEELYRALASRPTHSMAALFVAAMREWKRSVEGQPRSF
                     AGLQMRIEKVMEVTIQREIARLERHLLVLATIGSAGPFVGLFGTVWGIMTSFRAIAGQ
                     QSTSLAVVAPGIAEALFATAVGLIAAIPATIFYNKFVSDVNKQAQRLQGFADEFAAIL
                     SRQIDERG"
     gene            complement(1512..1979)
                     /gene="ybgC"
                     /locus_tag="VIQ50_09325"
     CDS             complement(1512..1979)
                     /gene="ybgC"
                     /locus_tag="VIQ50_09325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HEY9360623.1"
                     /translation="MNALDGELQDGRHVMSVRVYYEDTDFSGIVYHANYLRFMERGRT
                     NHLRLLGAHHRALFEEASAEAPGFAFVVRSMRLEFLKPARMDDVLAVVTAPEEVKGAS
                     ITLNQRILRGDELLVEAHVRVACVCEGRARPIPKGLRTAMRADQERSRRAPTR"
     gene            complement(1976..2374)
                     /locus_tag="VIQ50_09330"
     CDS             complement(1976..2374)
                     /locus_tag="VIQ50_09330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008974336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEY9360624.1"
                     /translation="MTSQTTMLKTMEGGCHCGRVRFRVTADLTRVTDCNCSICSKKGF
                     LHLIVLPEQFELLSGKDDLTTYQFNTRTAKHTFCKHCGIHPFYVPRSDPDKIDVNVRC
                     LDDIDLAAISPKPFDGKQWEAAMRARVPWR"
     gene            complement(2390..>2561)
                     /locus_tag="VIQ50_09335"
     CDS             complement(2390..>2561)
                     /locus_tag="VIQ50_09335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Holliday junction DNA helicase RuvB C-terminal
                     domain-containing protein"
                     /protein_id="HEY9360625.1"
                     /translation="DAIEEIIEPFLIQRGFLQRTPRGRLLTSHAFRHLGLAEPARDPA
                     QFGLFGEGPESQ"
BASE COUNT          477 a          826 c          800 g          458 t
ORIGIN      
        1 ggcggtgggg tcctcgaccg gcttcgcctc tgcgaccttt tcgaccaggg gcttcggcgt
       61 ctcggttttg ggcgcgctct tgctgccggc cgcaatgttg gagaactcgg ataccgtgat
      121 caggtcgacc ggcagaccct cggtcgacga caccgggagc gggttcgcgg caagcgacca
      181 cacgctccac agcaatacgg ctgcgtgccc aattcccgat atggtgtagg ccgtcttcat
      241 tccctctctc acgcaatcaa cgcgcggagg cctgctgctc gctctcggtc accaaggcca
      301 cgcggtggaa gccgccggcc gatatgctcc ccatcacctt catcacggtg ccatactcga
      361 gctgccggtc gccgcgcacg aagatgcgct cctcagcccc gcggcgagcc tcggttatcg
      421 ccttgagctt gggaacgagc tcctccgcgg agatttcggt attttgcaga tagatctggc
      481 cgttcgcctt gaccgagacc gtcagcggct ccttgtcctg atcgaggctc ttggcctggg
      541 tctgcggcag ctcgagcggc acgcccaccg tgagcagcgg cgccgacacc atgaaaatga
      601 tgagcagaac caacatgacg tcgaccatcg gcgtcacgtt gatctcggcc atgaccggac
      661 gacggcgatg ccgcctgccg gcgaccgcgg cagtgccgcc gttcatcgcc atttgcgtcc
      721 ccctatcccc gttcgtcgat ctgccgcgag agaatggcgg caaattcgtc ggcgaacccc
      781 tgcaagcgtt gcgcctgttt gttcacatcg gaaacgaact tgttatagaa aatggtcgcc
      841 ggtatggcgg cgatgaggcc gactgcggtc gcgaacaggg cctcggcgat accgggggcg
      901 accaccgcaa gcgaggtcga ctgctggccg gcaatcgcgc gaaagcttgt catgatgccc
      961 caaaccgtgc cgaacaggcc gacaaagggg ccggccgaac cgatcgtggc caagaccaga
     1021 agatgacgct ccaggcgggc gatctcgcgc tggatggtga cctccatgac cttctcgatg
     1081 cgcatttgca ggccggcaaa ggagcgcggc tggccctcga cgctgcgctt ccactcgcgc
     1141 atggccgcga cgaacagcgc cgccatggaa tgggtcggac gcgaggcgag cgcccgatag
     1201 agctcctcca aggattgccc ggaccagaac gcctgctcga aaccgtccat ggcgcgccgg
     1261 gtgcgcgaat aaagaacgag tttctcgatc gcgatcgccc aaaccatgac ggaggccacc
     1321 agcagcccga ccatcaccag tttgaccact agatctgcgt tctggaacag atcccagatg
     1381 gaaagcggcg cggcggacgg catgacatct ccttcccggc ggtccaaggc ctgtcccgcg
     1441 aaaggtgacc aaactagggc gcgaggcgtg cctttgcgaa cttagctgga gcatcttgca
     1501 ttaacgcacg gttaccgagt gggggcgcgg cggctgcgct cctggtcggc ccgcatggcg
     1561 gtgcgcagcc ccttgggaat gggacgcgcc cgcccctcgc agacgcaggc gacccgcaca
     1621 tgtgcctcga ccaacaactc atcccctcgc aggatgcgtt ggttgagcgt gatcgaggcg
     1681 cccttgacct cttccggcgc ggtcaccacc gccagcacgt cgtccatgcg cgcgggcttg
     1741 aggaactcga ggcgcatcga acgcacgacg aaggcaaaac ccggcgcctc cgcgctcgcc
     1801 tcctcgaaca acgcgcgatg atgtgcgccg aggagacgca gatgattggt gcggccgcgc
     1861 tccatgaagc gcaagtagtt ggcatgatag acgatgccgg aaaagtcggt gtcctcgtag
     1921 tagacgcgaa cggacatgac gtgacggccg tcttgcagtt cgccgtcgag cgcgttcatc
     1981 gccacggaac gcgggcgcgc atcgctgctt cccactgctt gccgtcaaat ggcttcggcg
     2041 agatcgcggc gagatcgata tcgtcgaggc aacgcacatt gacgtcgatt ttgtccggat
     2101 cggagcgcgg cacgtagaac ggatggatgc cgcagtgttt gcagaacgtg tgctttgcgg
     2161 tcctggtgtt gaactgatat gtcgtcagat catccttgcc actgagaagc tcgaattgtt
     2221 ccggcagaac gatcaaatgc aggaatcctt ttttgctgca tatcgagcag ttgcaatcgg
     2281 tcacgcgcgt cagatctgcc gtgacgcgga accgcacgcg gccgcagtga catccgccct
     2341 ccatcgtctt gagcatggtg gtctgcgacg tcatcgtgcc tccgcttcgc tactggctct
     2401 ccggcccctc gccgaacagc ccgaattgcg cgggatcgcg cgccggctcc gcaagcccaa
     2461 gatgacggaa ggcatgcgag gtcaatagcc gaccgcgcgg cgtgcgctgc aggaagcctc
     2521 gctggatcag gaacggctcg atgatttcct cgatcgcgtc g
//
LOCUS       DATCWM010000477         4012 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_138313, whole genome shotgun sequence.
ACCESSION   DATCWM010000477 DATCWM010000000
VERSION     DATCWM010000477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4012
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138313"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            428..>4012
                     /locus_tag="VIQ50_09340"
     CDS             428..>4012
                     /locus_tag="VIQ50_09340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006610459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004866 - endopeptidase inhibitor activity
                     [Evidence IEA];
                     GO_process: GO:0010951 - negative regulation of
                     endopeptidase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2-macroglobulin"
                     /protein_id="HEY9360626.1"
                     /translation="MRAFVRAAFAAALVLLLSAPTIAADKSFKRDDLADAAIKLEAQI
                     RAESGQVTKPIAELRREVDAAFQRGDDRGGVRILGQIVTIAPNRTVTWLRLARDLRQI
                     RASDYPERNLLLERAAAAAYIAYQRSANSTEKAESLVVIARTYADRQVWRPALDALRV
                     SLELNEVAEVRQQYERLREDHGFRLLDYTVDSDAASPRACFQFSEDLPSKRTDFSPFV
                     AVAGQDKPALSVQERQLCVEGLKHGERYSITLRAGIPSQVNETLTKSADFSVYVRDRK
                     PMVRFTGKAYVLPRTGQRGIPVVSVNTATVAAEIYRIGDRNLLETVVGRDFQRNLDRY
                     DLDHLAEARGARVWKGELAVEQSLNTEVTTAFPIAEAVGALAPGVYVMAAQPAGALKD
                     EFDSVATQWFIVSDLGLTAFSGNDGIHAFVHSLDTTQAKGAVEVRLLSRSNEVLSRKR
                     TADSGHVHFEADLSGGEGALAPAMLIASDSDGDYAFLSLKAPPFDLTDRGVAGRAVPS
                     GLDAFVYTERGVYRSGETVQVTTLLRDGQGMAVLNVPLTLVVERPDGVEYRRAVVPDQ
                     GLGGRALSVGLVSSAPSGTWRVRAFADPKRPPLGEATFMVEDYVPDRTEFELSSKARG
                     LSQTSAAEINVDGRFLYGAPAAKLELEGEVIVSPASERPGFAHYQFGLADEDVATTRQ
                     PLERLPETDDSGRASFAVKLEKQPEATRPLEAQVVVRMAEAGGRAVERKLTLPVIPDG
                     PMIGIKPLFSGRSLGEGENATFDVMVASPDGAPLARGGLRYELLKVETKYQWYRRDGV
                     WDFEPMKTTRRVADGRLDVAADRPARISLPVQWGRYRLEVSTGDPNGPLTSVGFDAGW
                     YAEASADTPDLLEIALDKPEYAPGESMTVAVTARTAGKVTLNVIADRLVSTVTQDVAA
                     GTAQLRVPVGSDWGSGAYVVATLRRPLDRAAERMPGRALGVQWFSINRKARTLALDMS
                     LPALLRPNSALRIPIKVGGLTPGEEARIVVAAVDVGILNLTGYRPPAPDDYYLGQRRL
                     TTEIRDLYGQLIDGMQGARGQIKTGGDAGSVELQGSPPTQKPLALYSGLVTVNADGTA
                     EVVFDIPDFAGTARVMAVAWSKDKVGRAAGDVTIRDPVVLTATLPRFLLRGDRGTMHL
                     DLDNVAGQGGDYRIEVRSEGLDVLASVPPQTLKLDAKQRSSTTVPLAAA"
BASE COUNT          682 a         1357 c         1301 g          672 t
ORIGIN      
        1 tgggtgcgat catagcggcc gcaagccagt gttagttgga cattcatcag gacagacccg
       61 atccagattt tctgcgcaac agccgccccc agctcgtgct gcgctcgcca gcaaccggat
      121 tgagtgactg acgatgcggt caggaaaggg aaaataacag gctatttcac agaaatccgg
      181 cggctgagcc ggttttcgtg cctggtcaac gcggattcaa tgataaagcg gcaagccata
      241 ggtccgcgtc atcgtctgcg tgacggcgca gagccaaaga ccgactccat ccctcgcgag
      301 ccaacccgtc gctttaccgc ggccgcgacg ccacccggct cggcttggcc acgacctcga
      361 catgttttcg cgttgatctt gcggccccgt tcggtttccc caccccggcg ggaatggagg
      421 tccccccatg cgcgcgttcg ttcgcgctgc gtttgcagcc gcgctcgtcc tgctgttgtc
      481 tgcccccacc atcgccgccg acaaatcatt caaacgcgac gatctcgccg acgcggcgat
      541 caaactggaa gcccagatca gggccgaatc gggccaggtg acgaaaccca tcgccgagtt
      601 gcggcgcgag gtcgacgccg ccttccagcg cggcgacgac cgcggcggcg tgcggatcct
      661 cgggcagatc gtgacgatcg cgcccaaccg taccgtgacc tggctgcggc tcgccaggga
      721 cttgcggcaa atccgcgcca gcgattaccc cgagaggaac ctgttgctcg agcgcgccgc
      781 agctgccgcc tacatcgcct atcagcgttc agccaattcc accgaaaagg ccgagagtct
      841 ggtcgtgatc gcacgcacct atgccgatcg ccaagtgtgg cgtccggcgc tcgatgccct
      901 gcgcgtttcc ctcgaactga acgaagtcgc cgaggtgcgt cagcaatacg agcgtctgcg
      961 tgaggatcac ggtttccggc tgctcgacta caccgtggat tcggatgcag cctcgccgcg
     1021 tgcctgcttc cagttctccg aggacctgcc gagcaagcgt accgatttct cgcccttcgt
     1081 cgccgtcgcc ggccaggaca agcccgctct ctcggtgcag gagcggcagc tctgcgtcga
     1141 aggcctcaag cacggcgagc gctactccat caccttgcgc gccggcattc cctcgcaggt
     1201 gaatgaaacg ctgacgaaat ccgcggactt cagcgtctac gtgcgtgacc gcaagccgat
     1261 ggtgcgcttc accggcaagg cgtatgtgct gccgcgcacc ggccagcgcg gcattccagt
     1321 cgtcagtgtc aatacggcga cggttgccgc cgaaatctat cgcatcggcg atcgtaacct
     1381 gctggagacg gtggtgggac gcgacttcca gcgcaatctc gaccgttacg atctcgatca
     1441 cctcgccgaa gcgcgcggcg cgcgggtctg gaaaggcgag ttggcggtcg agcagagcct
     1501 caataccgag gtcaccaccg ctttccccat cgcagaggcc gtcggcgcgc tggcgccggg
     1561 agtctacgtc atggcggcgc agcccgcggg cgcgctcaag gatgaattcg attcggttgc
     1621 gacccaatgg ttcatcgtct ccgatctggg gcttaccgcg ttttccggca acgacggcat
     1681 ccacgcgttc gtgcattcgc tcgatacgac ccaggccaag ggcgcggtcg aggtacggct
     1741 gctctcgcgc agcaacgaag tcctttcgcg caaacgcacg gccgattccg gtcacgtgca
     1801 tttcgaagcc gatctgtcgg gcggcgaggg cgcgctggcg ccggccatgc tgatcgcaag
     1861 cgacagcgac ggcgattacg ccttcttgag cctcaaagcg ccgcccttcg atctgaccga
     1921 ccgcggcgtc gccggccgcg cggtcccctc cgggctcgac gcctttgtct acaccgagcg
     1981 cggcgtctac cgctcgggag aaaccgtgca ggtcacaacg ctgttgcgcg acggccaggg
     2041 catggccgtg ctcaacgtac cgctgaccct cgtggtcgag cggccggacg gcgtcgaata
     2101 ccgccgcgcc gtcgttcccg accagggttt gggcgggcgc gcgctgtccg tcgggttggt
     2161 gtcgtccgcc ccgagcggca cctggcgcgt gcgcgccttc gccgatccga agcgcccgcc
     2221 cctcggcgag gcgaccttca tggtcgagga ctacgtgccc gaccggaccg aattcgagct
     2281 gagctcgaag gcaagggggc tatcgcagac gagcgcggcc gagattaacg tggacgggcg
     2341 ctttctctac ggcgcgccgg ccgccaaact cgagctcgaa ggcgaggtca tcgtttcgcc
     2401 ggcgagcgag cgaccgggct ttgcccatta tcagttcggg ctcgccgacg aggatgtggc
     2461 gaccacccgc cagccgttgg aacgcctgcc tgagactgac gacagcggcc gcgccagctt
     2521 tgccgtgaag cttgaaaagc agccggaggc gacgcgcccg ctcgaggcgc aagtcgtcgt
     2581 gcgcatggcc gaggcgggtg gccgtgcggt cgaacgcaag ctgacgctgc ccgtcatccc
     2641 agatgggccg atgatcggga ttaaaccgct gttctccggc cgctcgctcg gtgaaggcga
     2701 gaacgcgacc ttcgacgtga tggtcgcatc gccggatggg gcaccgctgg cgcgcggcgg
     2761 cctgcgctat gagctgctca aggtcgaaac caagtaccag tggtatcgcc gcgacggcgt
     2821 ctgggacttc gagccgatga agacgacgag acgcgtcgcc gatggccggc tcgatgtcgc
     2881 tgccgatcgg cccgcgcgca tttcgctgcc ggtgcagtgg ggccgctatc gccttgaagt
     2941 gtcgaccggc gatcccaacg ggccgctgac ctcggtcgga ttcgacgctg gttggtacgc
     3001 ggaggcgagc gccgacacgc cagacctcct cgaaatcgcg ctcgacaagc cggaatacgc
     3061 gcccggcgag agtatgactg ttgcggtgac cgcgcgtacc gccggcaaag ttaccctcaa
     3121 cgtgatcgcc gaccgactgg tctccacagt cacgcaggac gtggcggcgg gcacagcgca
     3181 gctgcgcgtg ccggtcggca gcgactgggg gagcggcgcc tatgtggtgg cgactctgcg
     3241 gcggccgctc gaccgggcgg ctgaacgcat gcccggccgg gcgctcggcg tgcagtggtt
     3301 ctcgatcaat cgcaaagcgc gcacgctcgc gctcgatatg agtttaccgg cgctgttgcg
     3361 ccccaatagc gcgctgcgca tcccgatcaa ggtcggtggg ctcacccccg gcgaggaggc
     3421 gcgcatcgtg gtcgccgcag ttgacgtcgg tatcctcaat ttgaccggct acaggccgcc
     3481 ggcaccggac gactattacc tcgggcaacg ccggctcacc accgagatcc gcgatctcta
     3541 cggtcagctc attgacggca tgcaaggcgc acgcggtcaa atcaagaccg gcggcgatgc
     3601 aggctcggtc gagctgcagg gttcgcctcc cacgcagaaa cccctcgcac tctattccgg
     3661 cctcgtcacc gtcaacgccg atggcacggc cgaggtcgta tttgatattc cggattttgc
     3721 cggcaccgcg cgtgtgatgg cggtcgcctg gtcaaaggac aaggtcggtc gcgccgccgg
     3781 cgacgtcacc atccgggatc cagtggtgct cacggcgacg cttccgcgct tcctcctgcg
     3841 cggcgatcgc ggcaccatgc acctcgatct cgacaacgtg gcagggcaag gcggcgacta
     3901 ccgcatagaa gtcaggagcg aagggctcga cgtcctcgcc agcgtgccgc cgcagacgct
     3961 caagctcgat gccaaacagc gcagctccac gacggtgccg ctggcggcgg cc
//
LOCUS       DATCWM010000478         3996 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_289706, whole genome shotgun sequence.
ACCESSION   DATCWM010000478 DATCWM010000000
VERSION     DATCWM010000478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3996)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3996)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3996
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_289706"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..522
                     /locus_tag="VIQ50_09345"
     CDS             <1..522
                     /locus_tag="VIQ50_09345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HEY9360627.1"
                     /translation="FELDGEAPELPADGRYWIADSAVVIGRVRLKTDASVWFNAVLRG
                     DNEWIELGERSQIQDNAMLHTDPGFPLKIGENCVIGHNVVLHGCSIAANSLIGMGAVV
                     LNGARIGRNCLVGAGAVVTEGKEFADNSLIVGSPARVVRALDEKAARAIADGADIYVR
                     RWRQYAKGLKRIG"
     gene            complement(550..1119)
                     /locus_tag="VIQ50_09350"
     CDS             complement(550..1119)
                     /locus_tag="VIQ50_09350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase-like cysteine peptidase"
                     /protein_id="HEY9360628.1"
                     /translation="MLSMAPAHAASERTLFISVGEAARAPAGWKQFCAEYAPECDTTE
                     LTARDAVLTSHAWDELLRINRWVNEAIRPMTDMEHWGVSERWNYPDDGYGDCEDYVLL
                     KRRMLMQAGWPRQALLITVVRDKQGDGHAVLTVKTDKGEFILDNQTEEVLLWSVTEYR
                     FVKRQSQIDPNLWIALGDPRPAAATASSR"
     gene            1655..2431
                     /locus_tag="VIQ50_09355"
     CDS             1655..2431
                     /locus_tag="VIQ50_09355"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HEY9360629.1"
                     /translation="MFDQPRRERMLNVPAAIVALLAVLGLVQLLLMFVLSAEQTTEFL
                     LLFAFIPARYDFSVLSDVAWPGGWAADIWTFVTYALIHADLSHLIFNAVWLLAFGSPV
                     ARRFGSLRFMAFMAMTAAAGAAMHLVTHFGELLPMVGASAAISGAMAAATRFVFQRGG
                     PLEMWRDRDEACRVPAAPLSVSLRDPRVIAFLLVWFGVNILFGVFSMGMPGVEQSIAW
                     QAHIGGFLAGLLAFAAFDPVPTALDSGKGPGPTSASVDRG"
     gene            2687..3118
                     /locus_tag="VIQ50_09360"
     CDS             2687..3118
                     /locus_tag="VIQ50_09360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008140911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEY9360630.1"
                     /translation="MHVKNILSAKGGQVVSIEPTATLETAVRTLAEHKIGALLVLGPD
                     RRIIGILSERDIVRVLAEEGASALTQPLAQVMTRKVFTCSPSETIGVIMERMTAGKFR
                     HVPVIEQDQVVGVVSIGDVVKYRLQEMENESAALRDYIQSA"
     gene            complement(3165..3623)
                     /locus_tag="VIQ50_09365"
     CDS             complement(3165..3623)
                     /locus_tag="VIQ50_09365"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9360631.1"
                     /translation="MECYGRLWRPAKPYRGAAPALNDLIPGRVNCYFGSGALLENMRA
                     GQIRGLAVTGSKTDPVAPELPTIAEAGVPGYEASSWHALFVPAKTPPAIVRKMSADTI
                     GALADPAARGKLEHFGYAVVGSSPGELEALLRSEIDKWSAVIKAVEIKIN"
BASE COUNT          724 a         1251 c         1257 g          764 t
ORIGIN      
        1 ttcgagctcg acggcgaggc gccggagctg cctgctgacg gccgctattg gatcgccgac
       61 agcgcggtcg tgatcgggcg cgtgcgactc aagacggatg ctagcgtttg gttcaacgcg
      121 gtgctgcgcg gtgacaacga atggatcgag ctcggcgagc gttcgcagat ccaggacaac
      181 gccatgctgc acaccgatcc gggctttccc ctcaagatcg gcgagaactg cgtcatcggc
      241 cataatgtgg tcctgcacgg ttgcagcatc gctgccaaca gcctcatcgg catgggcgcg
      301 gtcgtgctca acggcgcgag gatcggaaga aattgcctcg tcggggccgg cgcggtggtg
      361 accgagggca aggaattcgc cgacaactcg ctgatcgtgg gatcgcctgc ccgcgtggtt
      421 cgtgcgctcg atgaaaaagc cgcgcgagcg atcgccgacg gcgccgacat ctacgtgcga
      481 cgctggcggc aatatgccaa gggattgaaa cgaatcgggt aaaaacgaat ccggtaaccc
      541 gggaagggat cagcgcgagc tggcagtagc ggccgccggg cgcgggtcgc cgagcgcgat
      601 ccaaaggttg ggatcgatct gcgactgccg cttcacgaag cggtactcgg tcaccgacca
      661 aagcaggacc tcctccgtct ggttgtcgag gatgaactcg cctttgtcgg tcttgacggt
      721 gagcacggca tgcccatcgc cctgcttgtc acgcacgacg gtgatgagca gcgcctggcg
      781 cggccatccg gcttgcatca gcatcctgcg cttgagcaaa acgtaatcct cgcagtcgcc
      841 gtagccgtcg tcaggatagt tccaacgctc gctcacgccc caatgctcca tgtcggtcat
      901 cggcctgatc gcctcattga cccatcggtt gatgcgcaag agctcgtccc aggcgtggct
      961 cgtcaacacg gcatcgcgcg ccgttagttc agttgtgtcg cattccgggg cgtattctgc
     1021 gcagaactgt ttccatccgg ccggcgcgcg ggcagcctcg ccgaccgaaa tgaacaatgt
     1081 tcgctcgctc gccgcatggg cgggtgccat tgacagcatc cccgccgttg cgaaggcagc
     1141 gagcgcggct cgccatcgtt cgcgaacact cgaattcatt attgtgaccc tccctggtct
     1201 tgagggccac gtttcccaca aacgatttga accgccgcta atcctgcaaa ttcagtttga
     1261 agagaagccg actaaacagt tggacgaatg ctgctatcat tcgactcgaa ttcaaaccaa
     1321 attgaaatcg atacaatttg aatcgaactc cggcattaac ccgacgcggc cttccacgcg
     1381 gtcccttgct gcgcgcaggt cgggcggcgt taaggatcgc tccggcatgc ttccctacat
     1441 tgatggagcg aagaagtggg tggcggagtt ctctcggacg ccggtgcgcg ccgcctaggc
     1501 acggttctca tttacccgcc ggtgaccctc tattgcagaa aagcggccgc aacggatccc
     1561 cgggatcggc ctatcgcgct tgcccgaatg cgcgcgagcg cctatgtgaa cgcggccggt
     1621 cgtctcaatc ccgtcaataa atccagcagc acccatgttc gatcagcccc gccgcgaacg
     1681 catgctcaac gtgcccgcgg ccatagtcgc gttgctcgcc gtgctggggc tcgttcagtt
     1741 gttgctcatg ttcgtgctgt cggcggagca gacgacggaa tttctgctgc tcttcgcctt
     1801 catcccggcg cgttacgatt tcagcgtgct ctccgacgtg gcttggcccg gaggttgggc
     1861 agccgacatc tggacgttcg tcacctatgc gctcatccat gccgatctca gtcatctcat
     1921 cttcaatgcc gtgtggttgt tggccttcgg ctcgccggtt gcgcgaaggt tcggctcgct
     1981 gcgattcatg gctttcatgg cgatgaccgc tgccgccggc gccgccatgc atctcgtcac
     2041 ccatttcggc gaactgttgc cgatggtcgg cgcctcggcg gcgatttccg gagcgatggc
     2101 cgcggcgaca cggtttgtat ttcagcgtgg cgggccgctc gagatgtggc gcgaccgcga
     2161 cgaggcctgc cgggtgccgg cagcgccgct ctcggtaagc cttcgcgatc cgcgcgtaat
     2221 cgcattcctg ctggtctggt tcggcgtcaa tattctgttc ggggtgttct cgatgggcat
     2281 gcccggggtc gagcagtcga tcgcatggca ggcccatatc ggcggcttct tggccggtct
     2341 gctggcgttt gctgcattcg atccggtccc gacggcactc gacagcggca aagggccagg
     2401 gccgacgtcg gcctctgttg accgtggctg accgacacgc acagatagca gcgcagcact
     2461 gcaggcgagc accttgcggc atcgaacgtt cgggccgata atcttccaca ggtcagcgcc
     2521 gccgagcgcg gacgatgtcg agagccggtt gcccacacgg catcgcggcg cggggctcac
     2581 ccgtgcgcag acggcacagc tgacgcgacg aactcgatgg taagtcgagc atttccggca
     2641 cggcactccg cagggcgggg caacgccggt cggagggagg cgacccatgc acgtcaagaa
     2701 tattctctcc gccaagggcg gccaggtggt gtcgatcgaa cccacggcga cgctcgaaac
     2761 cgcggtgcgc acgctcgccg agcataagat cggcgcgctg ctggtgctcg gtccggatcg
     2821 gcggatcatc ggtatcctgt cggagcgcga catcgtgcgc gtactcgccg aggagggtgc
     2881 aagcgcgctg acgcagccgc tggcacaagt gatgacgcgc aaggtcttca catgcagccc
     2941 ctcggagacc atcggcgtga tcatggagcg gatgacggcg ggcaagttcc gccacgtgcc
     3001 agtgatcgag caggaccagg tggtcggcgt ggtgtcgatc ggcgacgtgg tcaagtaccg
     3061 gctccaggaa atggagaacg agtcggccgc gctgcgcgac tacatccaat cggcctgaaa
     3121 gcgttgccac gccggagaac tcccggccgc attctcggca agtgctagtt gatcttgatc
     3181 tcgaccgcct tgatcacggc gctccatttg tcgatttctg atctgagcag agcttccagc
     3241 tcgcccgggg aagagccgac gaccgcgtag ccgaagtgct ccagcttgcc tctcgccgcg
     3301 ggatcggcga gagccccgat ggtatcggcg ctcattttcc tgacgattgc aggcggcgtc
     3361 ttggccggca cgaacaaggc atgccaggac gaggcctcat acccgggaac gccggcctcg
     3421 gcgatcgtgg gcaactccgg ggccaccgga tctgttttgc tgccggtgac cgccagcccg
     3481 cggatctggc ccgcgcgcat gttttcgagc agcgcgccgc tgccgaaata gcagttgacc
     3541 ctgcccggga tgagatcgtt gagcgcaggc gccgcgccgc gatagggctt tgcaggcctc
     3601 catagccttc catagcattc cacagtcgtt gccgtaacat cttgatgtgt ggcaatttat
     3661 gtccacttac gtcttagggc ctccataggc ttccatgccc atgttggaga cagttcatgg
     3721 gacactaggg atgccatggc acgcaaaata cgggactcaa aactggagag tcgcagcgcg
     3781 agactgcgtc tacccatccg aaagaagccc tataccggac ccgccctcgc gcgaggaatt
     3841 catcttctct atcgcaggaa caggaccaac ggaacgtggg tgataaaggc ctccaacggt
     3901 caccgcggct actggaccaa gggctttgcg gtggccgatg actttgagga accggacggc
     3961 acgcacgtcc tcaccttcca ccaggccggc gacgca
//
LOCUS       DATCWM010000479         2604 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_79130, whole genome shotgun sequence.
ACCESSION   DATCWM010000479 DATCWM010000000
VERSION     DATCWM010000479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2604)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2604)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2604
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79130"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..598
                     /locus_tag="VIQ50_09370"
     CDS             <1..598
                     /locus_tag="VIQ50_09370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY9360632.1"
                     /translation="RWGCAEKDVEIDAGAVLGPDRQSLSLAAFAGTSAEASYASNKRT
                     YSYGAHAAHVAVDPKTGHVELLDYVAVEDAGRIINPLTLHGQVVGAIVQGLGGAFLEH
                     FIYDEDGQLLTGSLADYLLPTASDFPHIRAIALEEKPSPNNPLGAKGAGEGGIIPVGG
                     VIANAVAAALGSLGVEPRELPLSPPRVWELIHQRTAAR"
     gene            complement(608..1639)
                     /locus_tag="VIQ50_09375"
     CDS             complement(608..1639)
                     /locus_tag="VIQ50_09375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEY9360633.1"
                     /translation="MKRLRVLVLVHPELVPPDSLKGHTEQEINEWKTEYDVASTLREA
                     GHEVRPLGVENELKPIRDEIESWKPDVVFNLLEQFHGEAVYDQNVASYLELLRMPYTG
                     CNPRGLVLARGKDLSKKLLIYHRIPLPAFAVFPLRRKIRRPPRLAFPLIVKSLNEDAS
                     WGISQASVVDSDEKLTERVSFIHESIGTAAIAEQYIEGRELYVGVLGNERLRVFPIWE
                     LEFGTMPQGARLIATEKVKHDLQYQQRHNIEVGPAKDLSPQLVEAIKRAAKRIYRTLD
                     LDGYARIDFRLSADGIPYYIEANPNAEIARSEEFASAAKHDGLDYPDLIQRILALGLS
                     RAGATGIQL"
     gene            complement(1636..>2604)
                     /locus_tag="VIQ50_09380"
     CDS             complement(1636..>2604)
                     /locus_tag="VIQ50_09380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007596824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative zinc-binding metallopeptidase"
                     /protein_id="HEY9360634.1"
                     /translation="FKDLKVTIAGTWLERCLKDLHDELAERGLRIRPHAWISNEWFSP
                     DDTPGIAIPFYLAHPRLMRLERKRMIDVEGGTVADCMRILRHEAGHVVQVAYQLHRRR
                     RWRELFGPSSRRYPRYYRPNPASRRYVNHLPLWYAQSHPDEDFAETFAVWLTPRSNWR
                     RRYARWPALKKLQYVDELMAEIAGQKPLVTRRLRVEPLSQLTQTLAEHYEKKQAHHAI
                     DYPKIYDRDLRRIFSADPRHRRSPTASAFLRRNRAKIRQLVSKWTGEYELTLDSVFDD
                     MIGRCRELKLRAVGSERQLRMEFIVLLTAKTVHSLYSPSRRQWLAL"
BASE COUNT          466 a          811 c          826 g          501 t
ORIGIN      
        1 gcgatggggc tgcgcggaaa aagacgtcga gatcgacgcg ggggccgtgc tcggtcccga
       61 ccggcaatcg ctttcgcttg ccgcctttgc cggaacttcg gcggaagcct cctatgccag
      121 caacaagcga acctatagct acggcgcgca cgccgcccac gtcgccgtcg atcccaagac
      181 cgggcacgtg gaacttctcg actatgtcgc ggtcgaagac gccggccgca tcatcaaccc
      241 gctgaccctg cacgggcagg tcgtgggcgc catcgtgcaa ggtctcggcg gcgcgttcct
      301 cgaacatttc atctacgatg aagacggaca attgctcacg ggctcgctcg ccgactatct
      361 cctgccgacg gcaagcgatt ttccgcacat ccgggcgatt gcgctcgaag agaagccctc
      421 gcccaacaat ccgctcggcg ccaagggcgc gggcgagggt ggcatcattc cggtcggcgg
      481 cgtcatcgcc aacgcagtcg ccgccgcgct cgggtcgctc ggggtcgagc cgcgcgagct
      541 tccgctgtcg ccgccgcggg tgtgggagct tatccaccaa cgaactgccg cgcgttgatt
      601 tgcttgctca gagctggatt cccgtcgcgc cagcgcggct gaggcccaac gccaagatgc
      661 gctggatcag atcgggatag tcgaggccgt cgtgcttggc cgccgaggcg aactcctcgc
      721 tgcgggcaat ctcggcattg gggttggctt cgatgtaata gggaatgcca tcggcggaga
      781 ggcggaaatc gatgcgcgca tagccgtcga ggtcgagcgt gcgatagatg cgcttcgctg
      841 cgcgcttgat cgcttcaacg agctgcggcg agaggtcctt ggccgggccc acctcgatgt
      901 tgtggcgctg ctggtactgc agatcgtgct tgaccttttc agtggcgatg agccgcgcgc
      961 cttgcggcat ggtgccgaac tcgagctccc agatcgggaa cacgcgaagc cgctcattgc
     1021 ccaacactcc aacatagagc tcgcgaccct cgatatattg ctcggcgatg gccgcggtgc
     1081 cgatgctttc gtggatgaag ctcacgcgct cggtgagctt ttcatcgctg tccactacgg
     1141 acgcctgcga gatgccccac gaggcatcct cgttcaggct ctttacgatg agcgggaagg
     1201 cgaggcgcgg cgggcggcgg atttttcgcc gcagcgggaa cacggcaaaa gccggtaacg
     1261 gaatgcggtg gtagatcaga agcttcttcg acaaatcctt gccgcgcgcg agcacgagtc
     1321 cgcgcggatt gcagccggtg tagggcatcc gcaacaactc gagatagctc gcgacgttct
     1381 gatcgtagac ggcctcgccg tgaaactgtt ccagcagatt gaagaccaca tccggcttcc
     1441 aactctcgat ttcgtcgcgg atcggcttga gctcgttctc cacgccgagc ggccgcactt
     1501 cgtgacccgc ctcacgcagc gtgctcgcga cgtcgtattc ggtcttccac tcgttgattt
     1561 cctgttcggt atgccccttg agcgaatccg gaggcaccag ttccggatgc acgagcacca
     1621 gaacgcgaag gcgcttcata acgccagcca ttgtcgccgc gacggactgt aaagcgagtg
     1681 caccgtcttt gccgtcaaca agacgatgaa ttccattctc agctgtcgct cggagccgac
     1741 cgcacgaagc ttcagctcgc ggcagcggcc gatcatatca tcgaaaacag agtccagcgt
     1801 cagctcatat tcgcccgtcc acttcgaaac gagttgtcta atcttggcgc ggttgcgccg
     1861 tagaaacgcg gaggccgtcg gcgagcggcg atgtctcgga tcggcggaga agatgcgtcg
     1921 aagatcgcga tcgtagatct tcggatagtc gattgcatgg tgcgcctgtt tcttttcata
     1981 gtgctcggcc agggtctgcg tcagctggct cagcggctcg acccgcaggc ggcgcgtgac
     2041 gagcggcttc tgtccggcga tctcggccat cagctcgtcg acatattgca gtttcttcag
     2101 cgcgggccat cgggcatagc gcctgcgcca gttcgagcgg ggcgtcagcc acaccgcaaa
     2161 ggtctcggcg aaatcctcgt ccgggtggct ctgtgcgtac cacagcggca gatgattgac
     2221 gtagcggcga ctggccggat ttggccggta atatcgtggg tagcgcctcg acgacgggcc
     2281 gaacagctct cgccagcggc gccggcggtg caactgatag gccacctgca ctacatggcc
     2341 ggcttcgtgg cggagaatgc gcatacaatc cgccaccgtt cccccttcga cgtcgatcat
     2401 ccttttgcgc tcgagccgca tcaggcgggg atgggcgaga tagaaaggaa tcgcaatgcc
     2461 gggggtatcg tcggggctga accattcgtt cgatatccag gcgtgcggcc tgatccgaag
     2521 cccgcgctcc gcgagctcgt cgtggaggtc tttcaggcac cgctcgagcc aggtaccggc
     2581 gatggtgacc ttgaggtcct tgaa
//
LOCUS       DATCWM010000480         2933 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_295146, whole genome shotgun sequence.
ACCESSION   DATCWM010000480 DATCWM010000000
VERSION     DATCWM010000480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2933)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2933)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2933
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_295146"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1050
                     /locus_tag="VIQ50_09385"
     CDS             <1..1050
                     /locus_tag="VIQ50_09385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HEY9360635.1"
                     /translation="DIGTVGAIQKSSLVEMSVGVAIGAVTFTGSVIAFLKLSGRMSGA
                     PIILPARHVINFALAAAIVALIVVFARAESHLAFWLLTFAAFAFGVLIIIPIGGADMP
                     VVISMLNSYSGWAAAGIGFTLGNSALIITGALVGSSGAILSYIMCKGMNRSFISVILG
                     GFGGEVAGPAAGKEQRPVKQGSAEDAAFMLKNAGKVIIVPGYGMAVAQAQHALREMAD
                     RLKKEGVEVKYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEDINSEFAQADVAFVIG
                     ANDVTNPAAKEDPSSPIYGMPVLEVWKAGTVMFSKRSLSSGYAGIDNTLFYRDNTMML
                     FGDAKKMTEEIGKAL"
     gene            complement(1085..1378)
                     /locus_tag="VIQ50_09390"
     CDS             complement(1085..1378)
                     /locus_tag="VIQ50_09390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone modulator CbpM"
                     /protein_id="HEY9360636.1"
                     /translation="MISVQEFLIRTHIEQHLLETWIEAGWLVPPHTEPELLFADVDLA
                     RAQLIRDLREDFGINDEGISVVLHLVDQMHGLRRSMQGLLEEMRAEGRRGDKD"
     gene            complement(1380..2291)
                     /locus_tag="VIQ50_09395"
     CDS             complement(1380..2291)
                     /locus_tag="VIQ50_09395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020188282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HEY9360637.1"
                     /translation="MSDDPYAVLGVKREATQDEIRKAYRQLAKKLHPDLNPGDKAAEE
                     KFKQVSVAYDLLGDPEKRARFDRGEIDASGQERPRERYYRDFHGADAEPHVYSNHGGF
                     ADFMESEDILRDVFGRGGEGRIRLRGQDALYRLPVEFLEALNGATKRITLPDGGTLDV
                     VIPPGTRDKQVLRLRAKGGPGLGGGPPGDALVEIDVEPHGFFTRKGDDIHLELPISLP
                     EAVLGAKLDVPTPSGPVRMTVPKGANTGTVLRLRGKGAQRSDKTHGDEYVTLKIVLPQ
                     QLDPEIEEFARRWQAGQSQNPRQHLEA"
     gene            2461..>2933
                     /locus_tag="VIQ50_09400"
     CDS             2461..>2933
                     /locus_tag="VIQ50_09400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010969355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HEY9360638.1"
                     /translation="MLVGVPKEIKDSEYRVGLVPSAVRELTRSGHRVLVEKSAGLGAG
                     LSDDNYRSVGAEIVPDPDQIYARGELIVKVKEPLAPERKKLRAGQVLFTYLHLAADPE
                     QTADLMASGVTAIAYETVTSAHGTLPLLTPMSEVAGRMAPHVGARCLEKENGGRGV"
BASE COUNT          492 a          943 c          946 g          552 t
ORIGIN      
        1 gacatcggca ccgtcggcgc gatccagaaa tcgagcctgg tcgaaatgtc ggtcggggtg
       61 gccatcggcg cggtgacgtt cactggctcc gtgatcgcat tcctaaaatt gtccggccgc
      121 atgagcggcg cgccgatcat cctgcccgcg cgccacgtca tcaattttgc gttggcggcc
      181 gccatcgtgg cgctcatcgt ggtcttcgcg cgcgccgaga gtcacctcgc attctggctg
      241 ctgaccttcg ccgcctttgc cttcggcgta ctcatcatca ttccgatcgg cggcgccgac
      301 atgccggtgg tgatctcaat gctcaattcc tattccggct gggcggcggc cggcatcggc
      361 ttcacgttgg gcaactccgc gctcatcatc actggcgccc tggtcggctc ctcgggcgcg
      421 atcctgtcct acatcatgtg caaaggcatg aaccgcagct tcatctcggt gatcctcggc
      481 ggtttcggcg gtgaggtcgc ggggccggcg gccggcaagg agcagcggcc ggtgaagcag
      541 ggctccgccg aagatgccgc cttcatgctc aagaacgccg gcaaggtgat catcgtgccg
      601 ggttacggca tggcggtggc gcaggcgcag catgcgctgc gggagatggc cgatcggctc
      661 aagaaggaag gcgtcgaggt gaaatacgca atccatccgg tcgccggccg catgcccggc
      721 cacatgaacg tgctgctcgc cgaggcgaac gtcccttacg acgaagtgtt cgagctcgag
      781 gatatcaatt cggagttcgc ccaggcggac gtcgcgtttg tgatcggtgc gaacgacgtg
      841 acaaatcccg cagcgaagga ggatccgtct tcgccgatct atggcatgcc ggtcctggaa
      901 gtgtggaagg ccggcacggt gatgttttcc aagcgctcgt tgtcctcggg ttacgccggc
      961 atcgacaata cgctgttcta ccgcgacaac acgatgatgc tgttcggcga cgccaagaag
     1021 atgacggagg aaatcggcaa ggcgctgtga cgcgcgccgc cgaggagcga acgggaaccc
     1081 cgacttaatc tttatcccca cgccttccct ccgcgcgcat ttcctcgagc agaccttgca
     1141 tgctccgccg caagccgtgc atctggtcga cgaggtgcag gacgacggag atgccttcgt
     1201 cgttgatgcc gaagtcctcg cgcaggtcgc gaatgagctg cgcgcgcgcc aagtcgacgt
     1261 cagcgaacag cagctccggc tcggtgtgcg gcggaaccag ccagccggcc tcgatccagg
     1321 tttccagcag gtgctgctcg atatgggtcc gaatcagaaa ttcttgtacc gagatcattt
     1381 caagcctcca gatgctggcg cggattttgg ctttgccccg cttgccagcg acgcgcgaat
     1441 tcctcgatct ccggatcgag ttgctgcggc aggacgatct tgagcgtcac gtattcgtcg
     1501 ccgtgagtct tatcgctgcg ctgcgcgcct ttgccgcgca atcgtagcac cgtgccggtg
     1561 ttcgcgcctt tgggcacggt catgcgcact ggtccgctcg gcgtcggcac atcgagcttg
     1621 gctccgagca cagcttccgg caggctgatc ggcaactcga ggtggatgtc gtcgcccttg
     1681 cgggtgaaga acccatgcgg ctcgacatcg atctccacca gcgcatcgcc gggcgggccg
     1741 ccgccgagtc ccgggccgcc ttttgcgcgc agtcgcagaa cctgcttgtc ccgtgtgccc
     1801 gggggaatga cgacgtcgag cgtgccgcca tcgggcagag tgatgcgctt ggtcgcgccg
     1861 ttcagcgcct cgaggaattc caccggaagg cggtaaagcg cgtcctgtcc gcgcagccga
     1921 atccgccctt cgccgccgcg gccgaacacg tccctgagaa tgtcttccga ctccatgaag
     1981 tcggcgaagc cgccgtggtt gctgtagacg tgcggctcgg cgtccgcgcc gtgaaagtcg
     2041 cgatagtagc gctcgcgcgg ccgctcctgt ccggaggcgt cgatttcgcc gcgatcgaag
     2101 cgcgctcgct tctccggatc tcccaagaga tcgtaggcga cggagacctg cttgaatttt
     2161 tcctctgctg ctttatcgcc gggattgagg tccgggtgca gctttttcgc caattggcgg
     2221 tacgccttgc ggatctcgtc ctgcgtcgcc tcccgtttca cgcccaggac agcgtaggga
     2281 tcatcgctca cgtcgcgctc ctcgcctgac cgatccgtcg gacgttaggg aacgcgaccc
     2341 gatggcggaa atcaagcagc gcggaaatga ccggtggtgg catgtaggtc acgcgcgacg
     2401 tagacttgcg ccggactccg cccccggagc gccacggcga atgacattcg gaatcgcaac
     2461 atgctcgtcg gcgtgccgaa ggaaatcaag gacagcgagt accgcgtggg cctggtgccc
     2521 tcagcggtgc gggagctgac caggagtggt caccgcgtgc tcgtcgagaa gagcgccgga
     2581 ttgggagccg gcctcagcga cgacaattac cgctccgtcg gggccgaaat cgtgcccgat
     2641 cccgatcaga tctatgcgcg cggcgaactc atcgtgaagg tcaaggagcc gctcgcgccc
     2701 gagcgcaaga agctcagagc cgggcaagtg cttttcacgt atctgcacct cgccgccgat
     2761 cccgagcaga ccgccgatct gatggcctcg ggcgtcaccg ccatcgccta cgagacggtc
     2821 acgtccgccc acggcacctt gccgcttctg acgccgatgt ccgaggtcgc gggccgcatg
     2881 gcgccgcatg tcggcgctcg ctgtctggag aaggaaaacg gcggccgcgg cgt
//
LOCUS       DATCWM010000481         3124 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_446260, whole genome shotgun sequence.
ACCESSION   DATCWM010000481 DATCWM010000000
VERSION     DATCWM010000481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3124)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3124)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3124
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_446260"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            33..1757
                     /locus_tag="VIQ50_09405"
     CDS             33..1757
                     /locus_tag="VIQ50_09405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008130890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEY9360639.1"
                     /translation="MVITAEKEGHQRASVRSLKTMVDFAVGSHARALAVLLTVALLAF
                     LPGFFSIPPIDRDEARFAQATKQMLESGDYVDIRFQDEVRYKKPVGIYWLQAVVVKTA
                     SALGFPGALTTIWLYRIPSLIGSIGAVFLTYWAALAFVSRRAAVLAGLMMASCVLLGV
                     ERLIAKTDAMLLMTVVAAMGAMARAYLPQQRERLDAAGEWAIAAIFWTAVAAGVLLKG
                     PLIVMIVALAALALSILDRSARWLLTLKPLAGVIWLAVLVLPWFVAIIGRSGDAFLAQ
                     SVSEDLLSKVFAGQESHGAPPGYYFILFWVTFWPGATLAALATPAVWRARCEPAVKFL
                     LAWLVPSWLVFELVMTKLPHYVLPLYPAIAILIAGVVDARTLSRKPILEWGTVGWFIV
                     PMAAGIAGIVALAVIGRQFGLLVWPLMGAAAVLGFLAWRLYQADGAEHALLRAVAAAI
                     LTAIAIFGLIIPSLGQLFPSPALARILRESGCAHPEAATVGYQEPSLVFLAGTATRLA
                     DTAGAAEFLRGGECRFAFVEAREERSFAQRAEAMGLRYRAGPRIDAINVSTGRPITIA
                     VFRSMGAS"
     gene            1754..2611
                     /locus_tag="VIQ50_09410"
     CDS             1754..2611
                     /locus_tag="VIQ50_09410"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEY9360640.1"
                     /translation="MSLGNPLKQVSVTGAAARLYWLRANIAWSLALFARAPKSVVTPK
                     WRAPLRLAAGTLAGVVIVAITMIALDAPAVTAARQAPAWLIEFFHHITGYGRSVWFLV
                     PIAVALTAIAGVASPSLPRMSRGVLAALAVRLGFLLLAIGLPGLVWTVGKRLIGRARP
                     FVEGGAGPFVYHPLGWSVEYASLPSGHAVDAFAAAMAIGTLWPWTRPVMWTYAVLIAM
                     SRVVLTAHFPSDVMLGAVAGALGALVVRDWYAARRLAFVIGADGEVRPWPGPSFARIK
                     RVAGQLIAP"
     gene            2667..>3124
                     /locus_tag="VIQ50_09415"
     CDS             2667..>3124
                     /locus_tag="VIQ50_09415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEY9360641.1"
                     /translation="MSETYASAAAPAVSIVVPVRNEADNIAPLVDEIAAALDKDVDFE
                     LIYVNDGSSDRTQAALTELMASRPWLRQIKHDVSCGQSAAVSTGVRHARAGIVVTLDG
                     DGQNDPAFIPALLNAMAKAPRVGLVAGQRVGRQATGFKKFQSRIANAVRSL"
BASE COUNT          447 a         1036 c         1032 g          609 t
ORIGIN      
        1 cgtcagaagg ggcgcctgag cggataagcg atatggtgat cacggcggag aaggaggggc
       61 atcagcgcgc ctcggtgcgt agtctcaaga cgatggtcga ctttgcggtc ggctcgcacg
      121 cgcgtgcgct ggcggtactt ctcacagtcg cgctcttggc cttcctgcct ggcttcttca
      181 gcattccgcc gatcgatcgt gacgaggccc gcttcgctca agcaaccaag cagatgctgg
      241 agagcggcga ctacgtagat atccgtttcc aggacgaggt gcgttacaag aagccggtcg
      301 gaatttactg gctgcaagcg gtggtcgtga agacggcgag cgccctcggt tttccaggtg
      361 ccctcaccac gatttggctc tatcgcattc catccctcat cggatccatc ggtgcagtct
      421 tcctgactta ttgggccgca ctcgcattcg tgtcacgccg ggctgcggtg cttgccggac
      481 tgatgatggc aagctgcgtg ctcctcggcg tcgagcgcct catcgccaag accgacgcca
      541 tgttgctcat gaccgtcgtt gccgccatgg gcgcgatggc gcgcgcctac ctgccgcaac
      601 agcgcgaacg cctcgacgct gccggcgaat gggcgatcgc cgcaatattt tggactgcgg
      661 tcgccgcggg ggtgctgctg aaggggccgc tcatcgtgat gatcgtcgcg cttgccgcgc
      721 tcgcgctcag catcctcgat cgctccgcgc gttggctgct gacgctcaaa ccgctcgctg
      781 gggtcatttg gcttgccgtt ttggtgctac cctggttcgt cgccatcatc ggacgctccg
      841 gcgacgcgtt cctcgcccaa tcggtgagtg aagacctgct cagcaaggta ttcgccggcc
      901 aagagtccca tggcgctccg cccggctact atttcattct gttctgggtg accttctggc
      961 cgggcgcgac gctggcggca ttggcgacgc cggcggtctg gcgcgcccga tgcgagcctg
     1021 cggtcaaatt cctgctggcc tggcttgtgc cctcgtggct cgtgttcgag ctggtgatga
     1081 cgaagctgcc gcactacgtg ctgccgctct atcccgcgat cgccatcctg atcgccggcg
     1141 tggtcgacgc gcgcacactc tcgcgcaagc ccattctcga gtggggcacg gtggggtggt
     1201 tcatcgttcc gatggcagcg gggatcgccg gcatcgtcgc gctcgcggtc atcggccggc
     1261 aattcgggct gttggtctgg ccgttgatgg gagcagcggc ggttttgggc ttcctggctt
     1321 ggcggcttta ccaagccgac ggcgccgagc acgcgttgct gcgcgcggtc gcggccgcga
     1381 tcctgactgc aatcgccatt ttcggtttga tcatcccctc gctcggccaa cttttcccga
     1441 gcccggcgct cgcgcgcatc ctgcgcgaga gcgggtgtgc gcaccccgag gcagctaccg
     1501 tgggatatca ggaaccgagt ctggtgttcc tcgccggcac cgccacgcgc ctcgccgata
     1561 ccgcgggcgc cgcggagttc ctgcgcggcg gggaatgccg cttcgccttt gtcgaagcgc
     1621 gcgaggaaag gagctttgcc caacgtgccg aggcgatggg gctgcgctat cgcgccggcc
     1681 cccgcatcga cgcgatcaac gtcagcaccg gacggccgat caccatcgcg gtctttcgct
     1741 cgatgggcgc atcatgagtc tcggcaaccc gctcaagcag gtttcagtga cgggtgcggc
     1801 ggcccggcta tactggctgc gcgccaacat cgcgtggtct cttgcgctgt ttgcgcgcgc
     1861 cccgaaatcc gtcgtgacgc cgaagtggcg tgccccgctg cggctcgccg ccggcacact
     1921 ggcgggtgtc gtcattgttg cgataacgat gatcgcgctc gacgcgccgg cagtgaccgc
     1981 ggcgcggcaa gcgccggcgt ggctgatcga attctttcat cacatcaccg gatacggcag
     2041 gtcggtttgg tttctggtcc cgatcgcggt cgcgctgacg gcgattgcgg gggtcgcctc
     2101 cccctcgctt ccgcgcatgt cccgtggcgt gctcgcggcg ctcgcggtgc ggctgggttt
     2161 tctgctcctc gcgatcggcc tgcctggact ggtctggaca gtcggcaaac ggctcatcgg
     2221 ccgcgcccgg ccgtttgtcg aaggcggcgc cggcccgttc gtctatcatc cgctcggctg
     2281 gagcgtcgaa tacgcaagtc tgccgtccgg ccacgccgtc gatgcattcg ccgcagccat
     2341 ggcgatcggc acgctctggc catggacgcg gcccgtgatg tggacctacg ccgtgctcat
     2401 cgccatgagc cgcgtggtcc tcaccgcgca tttcccaagc gacgtcatgc tcggtgccgt
     2461 cgccggcgcg ctgggtgcgc tggtggtgcg cgattggtat gccgcgcggc ggctagcctt
     2521 cgtgattggc gcggatggcg aggttcgacc atggcccggc ccgtcgtttg cgcgcatcaa
     2581 aagggttgcc gggcagctta tcgccccata agaaacgcgc gcagcaagat gcaagtccgc
     2641 cgccgcgtcg ccatgccgga cagaccatga gcgaaacgta tgcaagcgcc gccgcgccgg
     2701 ctgtctccat cgtcgtgccg gtgcgcaacg aagccgataa catcgcgccg ctggtcgacg
     2761 agatcgcggc cgcgctcgac aaggacgtcg atttcgagct catctacgtc aacgatggct
     2821 cgagcgaccg cacgcaagcc gcattgaccg agctgatggc gagccgtcca tggctgcgcc
     2881 agatcaagca tgacgtctcg tgcggccagt cggcagcggt atcgaccggc gtcagacatg
     2941 cgcgggcagg catcgtcgtc acccttgatg gcgacggcca gaacgatccc gccttcattc
     3001 ccgcgctgct caatgcgatg gcgaaggcgc cccgtgtcgg gctcgtcgcc ggccagcgcg
     3061 ttggccggca ggcgaccggc ttcaagaagt ttcaatcgcg catagccaac gccgtgcgca
     3121 gcct
//
LOCUS       DATCWM010000482         2364 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_473028, whole genome shotgun sequence.
ACCESSION   DATCWM010000482 DATCWM010000000
VERSION     DATCWM010000482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2364)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2364)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2364
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_473028"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..646
                     /locus_tag="VIQ50_09420"
     CDS             <1..646
                     /locus_tag="VIQ50_09420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-dependent helicase C-terminal
                     domain-containing protein"
                     /protein_id="HEY9360642.1"
                     /translation="SEQPIAIVPDAASARMLAHGVVRIGVVRLPWTTALRQWRDRVMF
                     LRQTQGEEWPDLSDDALAASAVDWLAPALAGKTALGEFTNGEFTQALQAFLPWALRRR
                     LDAEAPSHFGAPSGSAVPIDYAAPEGPRLAIRLQELFGLDRHPTVAAGRVPLVLELLS
                     PAHRPVQVTRDLPGFWRGSYGAVRAEMRGRYPRHPWPDDPLAAMPTRRAKPRSS"
     gene            757..2256
                     /locus_tag="VIQ50_09425"
     CDS             757..2256
                     /locus_tag="VIQ50_09425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009029504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HEY9360643.1"
                     /translation="MFPKPKPALTPNTYAYESEPLVKPTGFREYDVRWLLEKEINLMG
                     VQALGLGLGTLIHELGASPQVVTGHDFRAYSASVKTALTTGLMAAGCDVRDIGLAVTP
                     MAYFAQFALDVPCVAMVTASHNDNGWTGVKMGASRPLTFGPDEINRLKAIVLEARFKL
                     RGGGAYAFVENFPERYIADLTQRPKLKRRLKVVCACGNGTAGAFAPRVLSAIGCEVVP
                     LDCELDHTFPKYNPNTEDMKMLHAMRDEVLRVKADLALGFDGDGDRCGVVDNEGEEIF
                     ADKVGVMLARGISAQHKGATFVADVKSTGLFMTDPVLRANGAKADYWKTGHSYMKRRV
                     NEIGAVAGFEKSGHFFFNPPLGRGYDDGLVFALAVCDMLDRNPDKSMADLKKALPKTW
                     SSPTMAPHCPDEVKYRVVDDVVAHFQQAKTRAEKVAGKPIRDLVTVNGVRVTLEDGTW
                     GLVRASSNKPELVVVVESPVSEARMREMFKALDTVLRTHREVGAYNQTI"
BASE COUNT          390 a          788 c          774 g          412 t
ORIGIN      
        1 ctccgagcag ccgatcgcca tcgtgcccga cgcggcgagc gcgcgcatgc tcgcgcacgg
       61 cgtcgttcgg atcggcgtcg ttcggctgcc atggacgacg gcgctgcggc aatggcgcga
      121 tcgggtcatg ttcttacgcc agacgcaagg cgaagaatgg ccggatctgt cggatgacgc
      181 gctcgcggca agcgccgtcg attggctcgc tcccgcgctt gccggcaaga cagcgctggg
      241 ggaattcacg aacggcgagt tcacgcaggc gctgcaagcg tttttgccgt gggcgctgcg
      301 ccgccggctc gacgccgagg cgccgagcca tttcggcgcg ccctcgggtt cggcggtacc
      361 gatcgactac gccgcgcccg agggaccccg ccttgccatc cgattgcagg agctgttcgg
      421 gctcgaccgt caccccaccg tcgcggctgg tcgggtgccg cttgtgctcg aactgttgtc
      481 gccggcgcat cgcccagtgc aggtgacacg cgatctgcct ggcttctggc gcggcagcta
      541 cggcgcggtc agggcggaga tgaggggccg ctacccgcgc catccttggc ccgacgatcc
      601 gctcgccgca atgcctactc gccgcgccaa gccgcgttcg tcgtgagcgc gtcatgagat
      661 tttatcgaca tcactactct cgcgccccgc gctttccccc gcgtggggct tgcgctatga
      721 ggctcgtgcg catcgaggca ccgtcaaggg actgcgatgt ttcccaagcc gaaaccagcg
      781 ctcactccca acacctatgc ttatgaatcc gagccgctgg tgaagcccac cggctttcgg
      841 gaatacgacg tgcgctggct cctggaaaag gagatcaact tgatgggcgt gcaggcgctg
      901 gggctcggcc tgggcacgct catccacgag ctcggcgctt ccccccaggt cgtcaccggg
      961 cacgatttcc gcgcctattc cgcctcggtc aagaccgcct tgacgacggg cctgatggcg
     1021 gcgggctgcg acgtgcgcga catcgggctg gcggtcacgc cgatggcgta ttttgcccaa
     1081 tttgccctcg acgtgccctg cgtggcgatg gtgaccgcgt cccacaacga caacggctgg
     1141 accggcgtga agatgggtgc aagccgtccg ctgactttcg gcccggacga gatcaaccgg
     1201 ctcaaggcga tcgtactcga ggcgcgtttc aagctgcgcg gcggcggcgc ctacgccttc
     1261 gtggaaaatt ttccggagcg ttacatcgcc gatctcacgc agcggccgaa actcaagcgc
     1321 cgcctcaagg tggtttgcgc ctgcggcaac ggcaccgccg gtgcgttcgc gccgcgcgtt
     1381 ctctccgcga tcggctgcga ggtcgttccg ctcgactgcg agctcgacca taccttcccc
     1441 aaatacaatc ccaacaccga agacatgaag atgctgcacg ccatgcgcga cgaggtgctg
     1501 cgcgtgaagg cggacctggc gctcggtttc gacggcgacg gcgaccgttg cggggtggtc
     1561 gacaacgagg gcgaggaaat tttcgccgac aaggttggcg tgatgctcgc gcgcggcatt
     1621 tccgcgcaac acaaaggcgc gaccttcgtc gccgatgtga agtcgaccgg cttgttcatg
     1681 accgatccgg tgcttcgcgc caacggcgcc aaggcagact attggaagac cggccactcc
     1741 tatatgaagc gccgggtcaa cgagatcggc gcggtcgcgg gcttcgaaaa gtccggccac
     1801 ttcttcttca atccgccgct cgggcgcggc tacgacgacg ggctcgtctt cgcgcttgcc
     1861 gtctgcgaca tgctcgaccg caaccccgac aagagcatgg ccgacctcaa gaaggcactg
     1921 cccaagacct ggtcctcacc caccatggcg ccgcattgcc ccgacgaggt caaatatcgg
     1981 gtcgtcgacg acgtggtggc gcactttcag caggcgaaga cgcgggcgga gaaggtggcg
     2041 ggcaagccga tccgcgatct ggtgaccgtc aacggggtgc gcgtcacgct cgaggacggc
     2101 acctgggggc tcgtacgggc ctcctccaac aagccggagc tggtagtggt tgtggagagc
     2161 ccggtttcgg aggcgcgcat gcgcgagatg tttaaggcgc tcgataccgt gttgcgcacg
     2221 catcgcgaag tcggcgcgta caaccaaacg atctgacgcc ggcgcacgct tctttatccg
     2281 gttctcctcg cctggcggac acgcatgcca gcgtggattt catttcaccg gacgcgctga
     2341 cgccgctacg cgggcaagcg gccc
//
LOCUS       DATCWM010000483         2488 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_246590, whole genome shotgun sequence.
ACCESSION   DATCWM010000483 DATCWM010000000
VERSION     DATCWM010000483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2488)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2488)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2488
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_246590"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..852
                     /locus_tag="VIQ50_09430"
     CDS             <1..852
                     /locus_tag="VIQ50_09430"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9360644.1"
                     /translation="RHLGKHIPGNPIIVPQNMTGAGSLKAANYLYSVAPKDGSVIGTF
                     SRSQGIAPLIDKAEFDSTKFTWLGSVTDEVSLCVTRHDAPAKTFNELLVTPATFGGEG
                     AGSDPNIFALLYRNVFGAKIKIVTGYPGTNEIQLAAERGEVDGLCGLSWSTLKGRYPH
                     WLKEKKANILVQAGIKRQPELPDVPSASELAKEVDQRQILNLLLIGQAMARPFAAPPG
                     IPADRRAALIAAFERTTADPEFLAEARRLDVEVNPVRADKLDALLAEAYAMPKDLIAK
                     AAKAMSD"
     gene            917..>2488
                     /locus_tag="VIQ50_09435"
     CDS             917..>2488
                     /locus_tag="VIQ50_09435"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEY9360645.1"
                     /translation="MGGLIGARIPRLEDGALLVGKGRFVDDIALAGVWHAAFVRSPHP
                     HAAIRRIDGSDALALPGVHAVLTLDDLAPVLAKRRMLRHSNSGAPLDRYWSFALADGE
                     VSFVGEPAAIVLAESRYVAEDAVAMVAVDYDVLASVGDARRAIEPTAPAVRRELNTNI
                     AAAYKIAYGDIDAAFAAAAYVFHEDLWQHRGGAHPIEGRGILAEWREDSMTVWASTQK
                     AHDLFQSLTALLDFDESRLRVATPDVGGGFGPKLCVYPEDIAVVAASKLVQRPVKWIE
                     DRREHFTNAAQERDQYWSLDIAVDEQAKLLGIRGRLIHDLGAYALQDVNIPYNSASML
                     SGPYVLPALAMDVVVAATNKTPVSSVRGAGYPQAAFAMERLMDRLARELRLDRAQVRA
                     RNLIPAEKMPYTKPLKARSGAGVCYDSGNYPAAQAAVLRAAGWEDFSQRQAAARQSRR
                     YIGIGLAHGIKGTGRGPFESGVVRVSNTGRVSVFTGAAAIGQGLRTALAQICAGELGL
                     RAQDVTVVPGDTSFVS"
BASE COUNT          425 a          817 c          830 g          416 t
ORIGIN      
        1 cgccacctcg gcaagcatat tcccggcaat cccattatcg tgccgcagaa catgaccggc
       61 gcgggcagcc tcaaggcggc caactatctc tattcggtcg ctcccaaaga cggctccgtc
      121 atcggcacgt tctcgcggag ccagggcatc gccccgctca tcgacaaagc cgagtttgac
      181 agcacaaaat tcacttggct cggcagcgtt accgacgagg tgagcctttg cgtgacccgc
      241 cacgatgcac cggcgaagac tttcaacgag ctcctcgtca cgcctgcgac tttcgggggg
      301 gagggcgcgg gctccgaccc caatattttc gcgctgcttt accgcaacgt attcggtgcc
      361 aagatcaaga tcgtgaccgg ctatcctggc accaacgaga tccagcttgc ggccgagcgc
      421 ggagaggtcg atgggctgtg tggattgtct tggagcaccc tcaaaggccg ctacccgcat
      481 tggctcaagg agaagaaggc caatatcctc gtgcaagccg gcatcaagag acagccggag
      541 ctgccggatg tgccgtcggc gagcgagctc gcgaaggagg tggatcagcg tcaaattctc
      601 aacctgctgc tgatcgggca agccatggcg cgccccttcg cggccccgcc gggcattcct
      661 gccgatcgcc gtgcggcact gatcgcggcg ttcgagcgca ccacggccga tccggaattt
      721 ctcgccgagg ccagacggct cgacgtggag gtcaatccgg tcagggcgga caagctcgat
      781 gcgctgctgg cggaggctta cgccatgccc aaggacctga tcgccaaggc cgccaaggcg
      841 atgtcggact gagtgacatc ggtcgaatga acgactgcaa aggcccgcgc cggctaaccg
      901 aggcgcggtc gagaacatgg gtgggttgat cggagcgcgc attccgcgcc tggaggatgg
      961 cgcgctgctc gtcggcaaag ggcggttcgt cgatgacatc gcgctcgccg gcgtgtggca
     1021 cgcggcgttc gtgcgcagcc cccatccgca cgccgcgatc cgccggatcg acggcagcga
     1081 cgccttggcc ttgccaggcg ttcacgccgt gctcacgctc gatgatctcg cgccggttct
     1141 cgccaagcgc cgcatgctgc gccactccaa ttccggggcg ccgctcgatc gctactggtc
     1201 gttcgcgctc gccgatgggg aagtgtcctt tgtcggtgag ccggccgcca tcgtgcttgc
     1261 cgagagccgc tatgttgccg aggacgccgt cgccatggtc gcggtcgact atgacgtgct
     1321 tgcgtcggtc ggggacgcgc gccgcgcgat cgagccgacg gcgcctgcgg tgaggcgcga
     1381 gctcaacacc aacatcgccg ctgcctacaa gatcgcctat ggcgatatcg acgcagcgtt
     1441 cgcagctgcc gcgtacgttt tccacgagga tctctggcag catcgcggcg gcgcccaccc
     1501 gatcgaaggc cgcggcatcc tcgcagaatg gcgcgaggac agcatgacgg tatgggcctc
     1561 gacgcagaag gcgcatgacc tgttccaatc gctgaccgcg ctgctcgatt tcgacgaaag
     1621 ccgcttgcgc gtggcaactc ccgatgtcgg cggtggcttc ggtcccaagc tctgcgtcta
     1681 tcccgaagac atcgcagtgg tggcggcgtc gaaactcgtc caacggccgg tcaaatggat
     1741 cgaggaccga cgcgagcact tcaccaacgc cgctcaggag cgcgaccaat actggtcgct
     1801 cgacatcgcg gtggacgagc aggcgaagct cctcggcatc cgcggccggc tgatccacga
     1861 cctcggggcg tatgcgttgc aggacgtcaa tatcccgtac aactcggcat cgatgctgag
     1921 cggcccttac gtgcttccgg ctttggccat ggacgtggtg gtcgccgcaa ccaacaagac
     1981 gccggtgtcg tccgtgcgcg gcgccggcta tccgcaggcg gctttcgcca tggaacggct
     2041 gatggaccgg ctggcgcggg agctgcgcct cgaccgggcg caggtgcggg cccgcaatct
     2101 cattccggcg gagaagatgc cctacaccaa gccgctcaag gcgcgctccg gcgccggcgt
     2161 gtgctacgac agcggcaatt atcccgccgc gcaggcggcg gtgctgcggg cggcgggttg
     2221 ggaggatttt agccaacggc aagccgcggc gcgacaatcg cggcgctata tcggtatcgg
     2281 tctggcgcac ggcatcaaag gcaccgggcg tggtccgttc gaatccggcg tggtgcgggt
     2341 ctcgaatacc ggacgcgtat cggtgttcac cggcgccgcc gcgatcggac aggggctgcg
     2401 cacggcgctg gcgcagatct gcgcgggcga gctcgggctg cgggcgcagg acgtcaccgt
     2461 cgtgccgggc gacaccagct tcgtctcg
//
LOCUS       DATCWM010000484         2749 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_95292, whole genome shotgun sequence.
ACCESSION   DATCWM010000484 DATCWM010000000
VERSION     DATCWM010000484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2749)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2749)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2749
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95292"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1450
                     /locus_tag="VIQ50_09440"
     CDS             <1..1450
                     /locus_tag="VIQ50_09440"
                     /EC_number="1.2.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003842 - 1-pyrroline-5-carboxylate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006562 - proline catabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="L-glutamate gamma-semialdehyde dehydrogenase"
                     /protein_id="HEY9360646.1"
                     /translation="SRPGIERSVRSPIDGKVIGRVGEANEATVAAAMAAAQAGFAAWT
                     ATALDMRAAALERASGLLEARRGRLIALLQAEGGKTLDDAVAEVREAVDFCRYYALEA
                     RRSLAPRALPGPTGEANELRYRGRGVFVCISPWNFPLSIFLGQISAALVAGNSVGAKP
                     AEQTPLVAAEAVRILHQAGISPSALHLLPGDGKVGAALVGDPRVAGVAFTGSTEVAHA
                     IHRALAAKEKAVVPLIAETGGINPMIVDATALPEQVTDDVITSAFRSAGQRCSALRLL
                     CLQEDVAEPILEMIAGAARELTLGDPREPSTHVGPVIDAEAKEKLDRWLADKEKQGRV
                     RFRWDRFKPLPVRGTYVPPAIITLDRAGDLRQEVFGPILHVVRWRANALDALLEELAG
                     NGYALTLGIHSRIDATAEHVVARLPHGNVYVNRSMIGAVVGTQPFGGNSLSGTGPKAG
                     GPNYLERFAAEQVVTVNTAAAGGNASLLASDE"
     gene            1504..1884
                     /gene="hisE"
                     /locus_tag="VIQ50_09445"
     CDS             1504..1884
                     /gene="hisE"
                     /locus_tag="VIQ50_09445"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004636 - phosphoribosyl-ATP diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HEY9360647.1"
                     /translation="MSDSLDRLYQAVLAARAADPTSSRTARLLRAGRSKMAKKLAEEA
                     VEVVIDAMNGHTDAVVRESADLLYNLVVLWVASDVHPKDVWTEMERRERLLGIAEKLP
                     KDGLDASLRRKVVALDRSRMRKRR"
     gene            1975..2562
                     /locus_tag="VIQ50_09450"
     CDS             1975..2562
                     /locus_tag="VIQ50_09450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019172219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YqaA family protein"
                     /protein_id="HEY9360648.1"
                     /translation="MLRRLYDWTLQKAASPAAEFWLAVIAFIESSIFLVPADVLFVPM
                     ALAIPKRAYRYALVATLASTAGGIAGYYLGHFAYSEIAKPILALYGKLEAFEQLRSSA
                     SKDAVLLMLVTSGLAHLPPIKVVTILSGVVGVNIWLFIASCLVARGARFFVLAWAFER
                     FGEPIRHFIERRLGLIAGVIAAFVIVLYAIVRYAL"
BASE COUNT          431 a          875 c          907 g          536 t
ORIGIN      
        1 gagccgtccc gggatcgaac gctcggtgcg ctcgcccatc gacggcaagg tgatcggccg
       61 ggtcggcgaa gcaaacgagg cgacggtagc ggcagcgatg gcggcggcgc aggcgggctt
      121 tgccgcctgg accgcgaccg cactcgacat gcgtgcggcc gcgctcgaac gcgcgagcgg
      181 tctcctcgaa gcgcggcgcg gccggctgat cgcgctgctg caggcggaag gcggcaagac
      241 gctcgacgac gccgtcgcgg aggtgcgcga ggcggtcgat ttctgccgct actacgcgct
      301 cgaggcacgg cgctcgctcg cgccgcgcgc gttgccgggc ccgaccggtg aagcaaacga
      361 gcttcgctat cgcggccgcg gcgtgttcgt ctgcatcagc ccatggaact ttccgctctc
      421 gatctttctc ggtcagatca gcgccgcgct ggttgccggc aattccgtgg gggcgaaacc
      481 cgccgagcag acgccgcttg tcgccgccga ggccgtgcgc atcttgcatc aagcgggaat
      541 ttcgccgagc gcactgcatc tcttgcccgg cgacggcaag gtcggcgcgg cactcgtggg
      601 tgatccgcgc gtcgccggcg tggctttcac cggctcgacc gaggtcgcgc acgcgatcca
      661 tcgcgcgctg gcggcgaagg aaaaagccgt cgtgccgctg atcgccgaga ccggcggcat
      721 caacccgatg atcgtcgatg cgaccgcgct gccggagcaa gtgaccgacg atgtgatcac
      781 ctcggccttc cgctcggccg gccagcgctg ctcggcgctg cgcctgctgt gcctgcagga
      841 ggacgtagcc gagcccatcc tcgagatgat cgctggcgcc gcgcgcgagc tcacgctcgg
      901 cgatccgcgc gagccttcga cccatgtcgg gccggtgatc gatgccgagg cgaaggagaa
      961 gctcgaccgc tggctcgccg acaaggagaa gcaaggccgc gtgcgtttcc ggtgggatcg
     1021 attcaagccg ctgccggtga gaggaacgta tgtgccgccg gcgatcatca cgctcgaccg
     1081 cgcgggagac ttgcggcaag aggtgttcgg gccaatcctg cacgtcgtgc gttggcgcgc
     1141 caacgcgctc gacgcgctgc tcgaggagtt ggcgggaaac ggctatgccc tcacgctcgg
     1201 cattcattcc cgcatcgatg cgaccgcaga gcacgtcgtc gcacgcctcc cgcatggcaa
     1261 tgtgtacgtc aaccgcagca tgatcggcgc ggtcgtcggc acgcaaccgt tcggcggcaa
     1321 ttccctctcc ggcaccggac cgaaggcggg cggtccgaat tatctcgaac ggtttgccgc
     1381 cgagcaggtc gtgacagtca acaccgccgc cgcgggcggc aacgcctcgc tgctcgccag
     1441 cgacgaataa cgagccatat tcattaaccc actcgcgggc ggttggcgct attctgagcc
     1501 gccatgagtg attcgctcga tcgcctctat caagccgtgc tggccgcccg cgccgccgat
     1561 ccgacatctt cgcggaccgc gcggctgttg cgcgcgggcc gcagcaagat ggccaagaag
     1621 ctggcggagg aagcggtcga ggtcgtgatc gatgccatga acggtcacac cgatgccgtg
     1681 gtgcgcgaga gcgccgacct gctctacaat cttgtggtgc tctgggttgc ctccgacgtt
     1741 catcccaagg acgtgtggac ggagatggag cggcgcgagc ggcttctggg aattgccgag
     1801 aagcttccga aggacgggct cgacgcgtcg ctacggcgca aagtcgtcgc gctcgatcgc
     1861 agccgcatgc gcaagcgccg ctgatcgcac agacgacggc tcgttgacgt ttgacctgcg
     1921 ctggcggttc caagccgatt gccgttcgtg ccatgatttc ggtatggtcc ccctatgttg
     1981 cgcaggcttt acgactggac cttgcaaaag gccgccagcc ccgctgccga gttttggttg
     2041 gccgtcatcg ctttcatcga aagctccata ttcttggtgc cagcggacgt acttttcgtg
     2101 ccgatggcgc tcgcaatccc gaagagagca tatcgctatg cgttggtcgc gacgttggct
     2161 tcgacggcgg gcggaattgc gggttattac ctgggacact tcgcctatag cgagatagcc
     2221 aagcccatat tggcgctcta cggaaagctc gaagcatttg agcagctgcg atcttcggcg
     2281 agtaaagacg cggtcctcct catgctcgtg acctctggac ttgctcattt gcctccgatc
     2341 aaggttgtga cgatcctttc cggcgtggtg ggcgtcaata tttggctgtt tatcgcttcg
     2401 tgtctggttg cccgcggtgc tcggttcttc gttttggctt gggccttcga gcggttcggt
     2461 gagcccattc gtcatttcat tgagcggcgc ttgggattga ttgccggtgt aattgctgcc
     2521 tttgtgatcg tcttgtatgc gatagttcgc tacgcgcttt gatcgaattt cttctgagtt
     2581 ccatgcctct cctcaatttt gccacgcccg gcgcccagcg ttcccgcggc tgtgctgtca
     2641 tgggaacggg atcgggatga ccggccgttc ggggcaaatc aatgctcgca gcttcgcgcc
     2701 acttgcgcgc gcgacgcttg ccgcgtgcgc gatgctattg gtcgcctcc
//
LOCUS       DATCWM010000485         4391 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_376131, whole genome shotgun sequence.
ACCESSION   DATCWM010000485 DATCWM010000000
VERSION     DATCWM010000485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4391)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4391)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4391
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_376131"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..377
                     /locus_tag="VIQ50_09455"
     CDS             <1..377
                     /locus_tag="VIQ50_09455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HEY9360649.1"
                     /translation="MLAEPGRFRGRKVGLILCGGNIDARILASVMVRELEREHRIVSF
                     RLTIPDQPGVLGQIATRLGQFGVNILAVEHRRLFLDVPAKGAKLDVTVEARDRSHAER
                     IFKVLEGEGFQPMWIDTATMME"
     gene            398..2926
                     /locus_tag="VIQ50_09460"
     CDS             398..2926
                     /locus_tag="VIQ50_09460"
                     /inference="COORDINATES: protein motif:HMM:TIGR03607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like protein"
                     /protein_id="HEY9360650.1"
                     /translation="MTLCLYDFGGRANRRAEGYQALREKELRIALVCFGGISLAVYMH
                     GVTKEILKLVRASSALHAIADRSRRAKASFFDGVDPNDLEYDTESVYFELLRNIGGSI
                     ELRVVVDIIAGASAGGINGTMLARALSHDLPMGALRDLWLKNADVAVLLSPDARAGAW
                     SKWFLKPLLWAMGRTGSFRAITDMEVRQKLSLFVRSRWFKPPLDGRVMAGLMYDAVTS
                     MGAETARASLLPSGQSLDLFVTLTDYYGYQQLVQIHDPPLIHERDHHHVLRFTYKRHP
                     NGQVESDFGFDNAPALAFAARATSSFPGAFPPARIVEMNEVVAHRHGSWPGRAEFIAK
                     SFPNHLRAGIDPATVSFLDGSVLNNRPFQEAIAAIHGRPAFREVDRRLVYIDPHPAPA
                     LQPRQQASPGFFATLRGALSDIPSSQPVIDELTRVLEFNEQVRRLRAIVDSARPQIDR
                     LVSKVVTTTFDRPIASAELRAWREQVNSHVARDAGFAYQAYVRLKLASVRAFGAELIA
                     KLRGVPTQSPLWRVVTEIIDAWALAKGIVYERADSEALEFEIGTDEHLPAWVKYLLAF
                     DVKYRVRRMHFLIKGQNRLYQLIDQDRFAGLDPLVVDRLKREFYGRLDALRRRETAEY
                     YSREVRELAADIFPDAPSAAEIKHLEAYAARFVERHIGKLDRLIAQLATEIDLNASTR
                     DLDDLLASLDPAEWHPQARREVLVNYLGFPFWDVLTFPLTRARELGELNEILIDRISP
                     QDAHTLPGFGGVESLKGIGFGHFAGFLSRSYRENDYLLGRLHALDRLVDLVCDAAGID
                     PKTDGIDVLALKKRGFAAILAAEESHLAHSQELIAALRRSIGEI"
     gene            complement(2932..3195)
                     /locus_tag="VIQ50_09465"
     CDS             complement(2932..3195)
                     /locus_tag="VIQ50_09465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018454513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HEY9360651.1"
                     /translation="MSNESILVILLVGLIAGWLAGKIVRGTGYGIVADICIGIIGALI
                     GSWLLPQLGIHLGAGIVSSIIAATIGAIILLIILRLVNRGGRW"
     gene            complement(3455..>4391)
                     /gene="hemB"
                     /locus_tag="VIQ50_09470"
     CDS             complement(3455..>4391)
                     /gene="hemB"
                     /locus_tag="VIQ50_09470"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018456862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HEY9360652.1"
                     /translation="RLVREHALTAHDLIWPLFLTEGSKTRVPVDSMPGVERLSVDEAV
                     REAERAAELAIPCLALFPYTDPKRRDQDGSEALNPDNLVCRAIRAIKQTVPEVGVLCD
                     VALDPYTSHGHDGLLRDGVILNDETVEVLVQQALVEAEAGCDIIAPSDMMDGRVAAIR
                     AGLDRAGFADVSIMAYAAKYASAFYGPFRDAVGSAATLLGDKRTYQMDPANSDEALHE
                     VDLDLAEGADMVMVKPGMPYLDILRRVKEAFGVPTFAYQVSGEYSMIMAASQNGWLDG
                     EKAMLESLIAFKRAGACGVLTYFAPRAAAALKTTR"
BASE COUNT          771 a         1417 c         1395 g          808 t
ORIGIN      
        1 ccatgctggc cgagccgggg cgattccgcg gccgcaaggt gggtttgatc ctgtgcggcg
       61 gcaacatcga cgcgcgcatc ctcgcctcgg tgatggtgcg ggagctcgag cgcgagcacc
      121 gcattgtgtc cttccggctg accatccccg accagcccgg cgtgcttggg cagattgcca
      181 cccggctcgg acaattcggc gtcaatattc tggcggtcga gcaccgccgg ctcttcctcg
      241 acgtcccggc caagggtgcc aagctcgacg tcaccgtcga agcgcgtgac cgctcgcatg
      301 cggaacggat cttcaaggtg ctcgaaggcg agggctttca gccgatgtgg atcgataccg
      361 caaccatgat ggaatgaggc gaccgggcga ttgcccattg acgctctgtc tttatgattt
      421 cggcgggcgg gcgaaccgcc gtgccgaggg ttatcaggcc ttgcgcgaaa aggaacttcg
      481 cattgcgctc gtttgcttcg gcggcatttc gctcgccgtt tatatgcacg gcgtcaccaa
      541 ggaaatcctg aagctggtgc gcgcctcgag cgcgttgcat gcgatcgcag accgctcgcg
      601 gcgggcaaaa gcgtcgttct tcgatggcgt cgatcccaac gacctggaat atgacaccga
      661 gagcgtctat ttcgagctgc tgcgcaacat cggcggcagc atcgagttgc gcgtggtcgt
      721 cgatatcatc gcaggcgcgt cggccggcgg catcaacggc accatgttgg cgcgtgcgct
      781 cagccacgac ttgccgatgg gtgcgctgcg cgacctgtgg ctcaagaacg cggatgtcgc
      841 ggtcctgctg tcgccagacg cgcgcgccgg cgcctggagc aagtggttcc ttaagccctt
      901 gctgtgggcg atgggccgca ccggcagctt tcgcgcgatc accgacatgg aggtgcggca
      961 gaagctttcg ctgttcgtgc gctcgcgctg gttcaagccc ccgctcgatg ggcgggtgat
     1021 ggccggtctg atgtacgacg ccgtgacgtc catgggcgcc gagactgcgc gcgcctcgct
     1081 gctcccttcc ggtcaatcgc tcgacctgtt cgtgacgctg accgactact acggttatca
     1141 gcagctcgtg caaattcatg atccgccgct catccacgag cgcgatcacc accacgttct
     1201 tcgttttacc tacaagcggc atccgaacgg gcaggtcgag agcgactttg gcttcgacaa
     1261 tgcgccggct ctcgcctttg cggcgcgggc gacgtcctcg tttccgggcg cctttccgcc
     1321 ggcgcggatc gtggaaatga acgaagtggt ggcgcaccgg cacggcagct ggccggggcg
     1381 cgcggaattc atcgcgaaat ccttccccaa ccatctgcgc gccggcatcg acccggcaac
     1441 ggtatcgttt cttgacggtt cggtcctcaa caaccgccct tttcaggaag cgatcgcggc
     1501 aatccacggc cggccagcgt ttcgcgaggt cgatcgccgt ctcgtctaca tcgatccgca
     1561 tccggcgccg gcgctacagc cgcgccagca ggcaagtccc ggcttctttg cgacactgcg
     1621 cggcgcgctc tcggacatcc caagctcgca gccggtcatc gacgagctta cccgcgtgct
     1681 cgaattcaac gagcaggttc gccggctgcg cgcgattgtc gacagcgctc gcccacaaat
     1741 cgaccggttg gtgtccaagg tcgtgaccac cacgttcgac cggccgatcg caagtgcgga
     1801 gctgcgagcc tggcgcgagc aggtcaactc gcacgtcgcc cgcgacgccg gatttgccta
     1861 tcaggcttac gtccggctca agctcgcctc ggtacgcgcc ttcggcgcag agctgatcgc
     1921 caagctccgc ggcgtgccga cgcaatcgcc gctatggcgc gtagtgacgg aaatcatcga
     1981 cgcctgggcg ttggccaagg gtatcgtcta cgagcgggct gacagcgaag cgctcgaatt
     2041 cgagatcggg acggacgagc atcttcccgc gtgggtgaaa tatcttctgg ctttcgacgt
     2101 gaaataccgc gtgcggcgca tgcacttcct gatcaagggg caaaacaggc tttatcagct
     2161 catcgatcag gaccgcttcg ccgggttgga tcctctggtt gtcgatcgcc tcaagcgcga
     2221 gttctatggc cggctcgacg cgctgcggcg ccgggaaacc gccgagtatt acagccgtga
     2281 ggtgcgggag ctcgcggccg acatttttcc ggacgcgccg tccgccgcgg aaatcaagca
     2341 tctcgaggcc tatgctgcgc gattcgtgga gcggcatatc ggcaagctcg accggctgat
     2401 cgcgcaattg gccaccgaga tcgatctcaa cgcgagcacg cgcgacctgg acgatctgtt
     2461 ggcctcgctc gatcccgccg agtggcatcc gcaggcgcgc cgtgaggtcc tggtcaatta
     2521 tctaggcttt ccgttctggg acgtgctgac gtttccgctg acgcgcgcgc gcgagcttgg
     2581 cgagctcaac gagattttaa tcgaccgcat cagtccgcaa gacgcccata cgcttcccgg
     2641 attcggcggc gtcgagagct tgaaaggcat cggcttcggc cacttcgccg gcttcctgtc
     2701 gcgctcctac cgcgagaacg actatcttct cggtcgcctg catgcgctgg accggctcgt
     2761 cgacctcgtg tgcgacgccg ccggcatcga tcccaagacg gacggcatcg atgtgctggc
     2821 gctcaagaag cgtggcttcg ccgcgatcct cgccgccgag gaatcccatc tcgcccacag
     2881 ccaggaactg atcgccgcct tgcgccgctc aatcggcgag atctagctcg atcaccatcg
     2941 gcctccgcgg ttgacgagcc gcagaatgat gagaaggatg atggcgccga tggtggctgc
     3001 gatgatggat gagacgatgc cggcgccgag gtggatgccc agctgcggca ataaccaact
     3061 gccgatgagg gcgccgatga tgccgataca aatatcggcg acgatgccgt agccggtgcc
     3121 cctaacaatc tttccggcaa gccatcctgc gatcaagccg accaacaaaa tgacgagaat
     3181 cgattcgttt gacattgctc gttttctccc attcgcgacc tgagatggcc gcagaccccg
     3241 gatgcgccca ccatagcgaa tgcacgccat ggcggccagc gccgcgcagc gattcggtac
     3301 ggcgcattca aggctgcccc aagaacttta gcctggcggg aatctgcccg ggttcaatat
     3361 ttgagattgg ccgaaatcgg gtaaagccga cgcacgcgga ggaaaggaag cccgccgcgc
     3421 cgccgcgcgt ttctgcaagc gctatgaaaa cgcgctaacg ggtcgttttc agcgccgcgg
     3481 cggcgcgcgg ggcgaaatag gtgagcacgc cgcacgcccc agcgcgcttg aatgcgatca
     3541 ggctttccag cattgccttt tcgccgtcga gccagccatt ctgcgacgcc gccatgatca
     3601 tcgaatattc gccggagacc tggtaggcga aggtcggcac gccgaaggcc tctttcaccc
     3661 gccgcagaat gtcgagatag ggcatgccgg gcttgaccat gaccatgtcg gcgccctcgg
     3721 cgaggtcgag gtcgacctcg tgcagcgcct cgtcgctgtt ggcgggatcc atctggtagg
     3781 ttcgcttgtc gccgaggagc gtcgcggccg agccgaccgc gtcgcggaac gggccataga
     3841 aggccgaggc gtatttggcc gcataggcca tgatcgacac gtcggcgaag ccggcgcgat
     3901 cgaggccggc gcggatggcc gcgacgcgcc cgtccatcat gtcggaaggc gcaatgatgt
     3961 cgcagccggc ctcggcctcg accagcgcct gctgcaccag gacctccacg gtctcgtcgt
     4021 tgagtatgac gccatcgcgc agcaggccgt catggccgtg gctggtgtag ggatcgagag
     4081 cgacgtcgca gagtaccccg acctccggca cagtttgctt gatggccctg atggcacgac
     4141 acaccaaatt gtccggattg agcgcctcgc ttccgtcctg gtcacggcgc ttcgggtcgg
     4201 tatagggaaa gagcgcaaga cagggaatgg caagctcggc ggcgcgctcg gcctctcgca
     4261 cggcctcatc gaccgagaga cgctcgacgc ccggcatcga gtcgaccggc acgcgcgtct
     4321 tcgatccttc ggtgaggaac aacggccaaa tcagatcatg cgcggtcaat gcgtgctcgc
     4381 gcacgaggcg c
//
LOCUS       DATCWM010000486         2062 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_192118, whole genome shotgun sequence.
ACCESSION   DATCWM010000486 DATCWM010000000
VERSION     DATCWM010000486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2062
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192118"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            7..810
                     /locus_tag="VIQ50_09475"
     CDS             7..810
                     /locus_tag="VIQ50_09475"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY9360653.1"
                     /translation="MAREDKECAAIVLDALAREGVAIRSHVAIARVEAAGAKIKAVLG
                     DGETAIEGSHLLIATGRKANTEGLALEAARIACDRNGIKVNKGLKTSNRRVYAIGDVA
                     GRGQFTHLANYHAGLVIRNALFRLPVKVNADLVPRVTYTDPELAHVGLTESEARKRRI
                     AIRVLRWPYHENDRAQTECETVGHIKVLTDRRGKILGATIVGAAAGELITAWTLAISR
                     GLNIRALAGMIVPYPTLAEIGKRAAVTYFLPSVTSVWVRRIIVFLRRFG"
     gene            830..>2062
                     /locus_tag="VIQ50_09480"
     CDS             830..>2062
                     /locus_tag="VIQ50_09480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEY9360654.1"
                     /translation="MDMIRRPVAADASGRPRARMGLSGKLLVLTLLFVMIAEVLIYVP
                     SIANFRLNWLQDRLSAAYTAALVFGTAPSGEVPEPVARQILESIRAHAVALKLGQQRR
                     LLAAGNMPGPVTHDIDMRDMSWHRAIIEAFDTLICTDADVMRVVGPAPMGGEFVEIVL
                     DEAPLRKAMVDFSIRILILSLIISAITATLVYFALHRMLVRPMRRMTANMVAFRADPE
                     NPARIMAASQRSDEIGTAERELAAMQLNLASLLQQKNHLAALGLAVSKINHDLRNLLS
                     SAQLFSERLAKISDPHVQRFAPKLMVALERAIAFCQSTLSYGRVQEAPPDRRLIPLEP
                     LVQDVCETLGLDSTSRVRWVTAIERGVTVDADPDQLFRILLNLARNALQALETRDAKD
                     PGHDQIRVTGRREGAVVVI"
BASE COUNT          334 a          706 c          673 g          349 t
ORIGIN      
        1 gagccgctgg cgcgcgaaga taaggaatgc gccgcgatcg tgctcgacgc gctcgcgcgc
       61 gaaggcgtcg ccatccgcag ccatgtcgcg atcgcgcgag tggaggcggc gggcgcgaag
      121 atcaaggccg ttctcggcga cggcgagacg gcgatcgagg ggagtcacct cctgatcgcg
      181 accgggcgca aagcgaacac cgaggggctt gcactcgagg ccgcccgcat cgcctgcgac
      241 cgcaatggca tcaaggtcaa caagggcctc aagacgtcga accggcgcgt ctacgccatc
      301 ggcgatgtcg cgggccgcgg tcagttcacc cacctcgcca actatcacgc cgggctcgtc
      361 atccgaaacg cgctgtttcg cctgccggtt aaggtgaacg cggaccttgt gccgcgagtg
      421 acctacaccg accctgagct ggcccatgtc ggcctgacgg agagcgaggc gcggaagcgc
      481 cggattgcca tccgcgtgct gcgctggccg taccacgaga acgaccgtgc acagaccgag
      541 tgcgagacgg tggggcacat caaggtcttg accgaccggc ggggcaagat cctcggtgcc
      601 accatcgtcg gcgcggccgc tggcgagttg attaccgcct ggaccctggc gatcagccgg
      661 ggcctgaata tccgggccct tgccggtatg atagtgccat atcccaccct ggcggagatt
      721 ggaaaacgcg ccgcggttac ttatttcctc cccagtgtga ccagtgtttg ggtgcggcgc
      781 atcatcgttt tcctgcgccg cttcggctga cccggggcac gaggctttca tggacatgat
      841 ccgtcgacct gttgcggccg acgcatcggg ccgcccgcga gcgcgcatgg gcctttcggg
      901 caagctcctc gttctcacgc tcttgttcgt gatgatcgcg gaagtgctga tctacgtgcc
      961 ctcgatcgcc aacttccggc tcaactggct ccaggaccgg ctgtctgcgg cctacaccgc
     1021 ggcgctcgtg ttcgggaccg cgccgagcgg ggaggtgccc gagccggtcg cgcggcagat
     1081 cctcgagagc atccgcgcgc acgcggtcgc gctgaagctc gggcaacagc gccgactgct
     1141 cgcggccggg aacatgccgg gcccggtcac ccacgacatc gacatgcgcg acatgtcgtg
     1201 gcatcgcgcc atcatcgagg ccttcgatac gctcatttgc accgacgccg acgtgatgcg
     1261 cgtggtcggg cccgcgccga tgggcggcga gttcgtggag atcgtgctcg acgaggcgcc
     1321 gctgcgcaag gcgatggtgg atttctccat ccgcatcctg atcctctcgc tgatcatctc
     1381 ggcgatcacg gcgacgctcg tctatttcgc gctccaccgc atgctggtgc ggccgatgcg
     1441 gcgcatgacc gccaacatgg tggcgttccg cgccgatccg gagaatcccg cgcgcatcat
     1501 ggcggcctcc cagcgcagcg acgagatcgg caccgccgaa cgcgaactcg ccgccatgca
     1561 gctcaacctc gcgagcttgc tgcagcagaa gaaccatctg gcagcgctcg ggctcgcggt
     1621 gtccaagatc aaccacgacc tgcgcaacct tctctcctcg gcgcagctct tttccgagcg
     1681 gctggcgaag atttccgacc cgcacgtgca gcgctttgcg cccaaactga tggtcgcgct
     1741 cgagcgcgcc atcgccttct gccaatcgac cttgtcctat ggccgcgtgc aggaggcgcc
     1801 gcccgaccgc cggctgattc cgctcgagcc tctggttcag gacgtgtgcg aaaccttggg
     1861 gctcgattcc acctcgcggg tgcgatgggt caccgcgatc gagcgcggcg tcacggtcga
     1921 tgccgatccg gatcagctgt tccgcatcct gctcaatctc gcgcgcaacg cgctgcaggc
     1981 actcgagacg cgcgatgcca aggaccccgg ccacgatcag attcgcgtga ccggccggcg
     2041 tgagggcgcg gtcgtggtga tc
//
LOCUS       DATCWM010000487         2228 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_251919, whole genome shotgun sequence.
ACCESSION   DATCWM010000487 DATCWM010000000
VERSION     DATCWM010000487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2228)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2228)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2228
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_251919"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..103)
                     /locus_tag="VIQ50_09485"
     CDS             complement(<1..103)
                     /locus_tag="VIQ50_09485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HEY9360655.1"
                     /translation="MRIVVAAIGRLKQGPERELAERYRKRATDAGRRA"
     gene            complement(175..609)
                     /gene="rsfS"
                     /locus_tag="VIQ50_09490"
     CDS             complement(175..609)
                     /gene="rsfS"
                     /locus_tag="VIQ50_09490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HEY9360656.1"
                     /translation="MNERKGPLLTPAVSRAGAHSAAEPISKVRPDTEEILRLVLARLD
                     DMKAEDTVTIDLTGKSTIADAMVVTSGRSNRHVGSVADRVLEDLAAAGVPDARVEGMP
                     HCDWVLIDAGDVIVHVFRPEVRAFYNLEKMWASTGRHGWRAS"
     gene            complement(662..1276)
                     /locus_tag="VIQ50_09495"
     CDS             complement(662..1276)
                     /locus_tag="VIQ50_09495"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012592251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HEY9360657.1"
                     /translation="MRIGLFGGTFDPPHEAHLSASLLAMKRLDLDRVWWLVTPGNPLK
                     DTRGLAPLAQRIVAAGALARHPRIDISSLEAQIGTTYTYETIAYLRRHCPGVRFVWIM
                     GADNLRSFHRWQRWRGIAAVVPIAVVDRLGPSLYANASPAGHAFSRARIPETAAKSLP
                     YRKPPAWVYLHGLKSPLSSTALRAARHRTDAKAPQYGDCGTAAG"
     gene            complement(1369..>2228)
                     /locus_tag="VIQ50_09500"
     CDS             complement(1369..>2228)
                     /locus_tag="VIQ50_09500"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004350 - glutamate-5-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HEY9360658.1"
                     /translation="ASLCLKAGNAAILRGGSESYRSNQAIHAALVEGMRAASLPEAAI
                     ALVPIRDRSAVGMMLAGLDGAIDVIVPRGGKSLVARVQSEARVPVFAHLEGVCHVYVD
                     KAAKLDMAQTIVLNAKMRRTGVCGAAETLLVDRAAAATHLKPLVTMLLDAGCEVRGDE
                     TARAADRRVKPATEQDWSTEYLDAVISAKMVDGVDGAISHIERFGSHHTDSIVTEDRA
                     AAEKFLREVDSAIVLHNASTQFADGGEFGFGAEIGIATGRFHARGPVGVEQLTSFKYR
                     VRGSGQIRP"
BASE COUNT          356 a          725 c          785 g          362 t
ORIGIN      
        1 cggcgcggcg accggcgtcg gtcgcgcgct tgcgatagcg ctccgcaagc tcgcgctcgg
       61 gaccctgctt caagcggccg atggcggcga ccacgatgcg catgcgtgac gatacgcatg
      121 gatcatggat cggctcaagc cgctcacgcg ccccgagcga taccgccggg acccttaact
      181 cgcccgccac ccatgccggc cggtcgacgc ccacatcttc tcgagattgt agaaggcgcg
      241 gacttcgggc cggaacacgt ggacgatgac gtcgccggcg tcgatgagca cccagtcgca
      301 gtgcggcatg ccttccacgc gcgcgtcggg cacgccggcc gcggccaggt cttcgagcac
      361 gcgatccgcg accgagccga catggcggtt cgacctgccg gaggtcacaa ccatggcgtc
      421 cgcgatcgtc gatttgccgg tgaggtcgat ggtgacagtg tcctcggcct tcatgtcgtc
      481 gaggcgtgcg aggaccaggc gaaggatctc ctcggtgtca ggtcgcacct tggagatggg
      541 ttcggcggcg ctgtgggcgc cagcgcgaga gactgcaggt gtcagcaggg gtcctttcct
      601 ttcgttcatc gccccgcgcg aagcgaagca agcctaagat aggcacggcc ggttaacggt
      661 ttcaacctgc cgccgttcca caatccccat actgtggcgc tttggcatca gttctatgac
      721 gggcggcgcg caaggccgtc gacgacagcg gcgatttgag cccatggagg taaacccagg
      781 ccggcggttt gcggtaaggg agagacttcg ccgccgtttc cgggatgcgc gcgcgcgaga
      841 acgcgtggcc tgccggactg gcgttggcat agaggctggg acctagtcga tcgacgaccg
      901 cgatcggcac cacggcggcg atgccgcgcc atcgttgcca gcggtggaag ctgcgcagat
      961 tgtccgcgcc catgatccag acgaagcgga caccggggca gtggcggcgc aaataggcga
     1021 tggtctcgta ggtatatgtt gtgccgattt gcgcttcgag gctgctgatg tcgatgcggg
     1081 ggtggcgcgc cagcgcgcca gcggcgacga tccgctgcgc gaggggagca agcccgcgcg
     1141 tgtctttgag cggattgccg ggcgttacca gccaccacac gcggtcgaga tcgagccgct
     1201 tcatcgccag caaagaggcg ctgagatgcg cctcgtgcgg cgggtcgaag gtgccgccga
     1261 acaggccgat gcgcatgcct gggccgtgcg gaggcagcac gatgcgtggc accgccgctt
     1321 gaccctctgc ccgggcggga gggggttgcg acggcgcaag cgatgtggtc acggcctgat
     1381 ctgccccgag ccgcgcacgc gatacttgaa actcgtcagt tgctcgacgc cgaccggtcc
     1441 gcgcgcgtgg aaacggccgg tggcgatgcc gatctcggcg ccgaacccga actcgccgcc
     1501 gtcggcgaat tgggtcgacg cgttgtgcag gacgatcgcg gagtcgacct cgcggagaaa
     1561 cttttccgct gcggcgcgat cctcggtgac gatcgaatcg gtgtgatggg agccgaagcg
     1621 ctcgatatgg ctgatcgcgc catccacgcc gtcgaccatt ttggccgaga tgacggcatc
     1681 gagatactcg gtcgaccagt cctgttcggt cgccggcttg acgcgccggt cggccgcacg
     1741 cgcggtctcg tcgccgcgca cttcgcagcc ggcgtcaagc agcatggtga cgagcggctt
     1801 gaggtgcgtc gccgcggcgg cacggtcgac gagcagcgtc tccgccgcgc cgcacacgcc
     1861 ggtgcgtcgc atcttggcgt tgagcacgat cgtctgcgcc atgtcgagct tggccgcctt
     1921 gtccacgtag acatggcaaa cgccttcgag gtgggcgaac accggcacgc gcgcctcgct
     1981 ttgcacgcgc gcgaccaagc tcttgccgcc gcgcggcaca atcacgtcga tcgcgccgtc
     2041 gagccccgca agcatcatgc cgacggcgga acggtcgcgg atcggcacga gcgcgatcgc
     2101 ggcctcgggc agcgatgccg cgcgcatgcc ttcaaccagc gcggcgtgaa tcgcttggtt
     2161 cgagcggtag ctttccgagc cgccgcgtag gatcgccgca ttgccggcct tgaggcagag
     2221 cgaggcgg
//
LOCUS       DATCWM010000488         2684 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_386938, whole genome shotgun sequence.
ACCESSION   DATCWM010000488 DATCWM010000000
VERSION     DATCWM010000488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2684)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2684)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2684
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_386938"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            245..1444
                     /locus_tag="VIQ50_09505"
     CDS             245..1444
                     /locus_tag="VIQ50_09505"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEY9360659.1"
                     /translation="MTLPRLMLIAAAALAACSQTYAADDTLTIGFTVSRTGKLNNEST
                     AQMRGFELWRDEVNAKGGIAAGDKRYKVSLVSYDDESANQRVQQLYTRIINQDKAQFL
                     FSPYSSGLVATAAIVSEQHGRIMLTTGAAEEKTYKLGNKNLFQVYSSADLYLAGAIQV
                     VKELYSKAEPALVYKDDPLSKAVLQSARKQVAEAGLRTALDEAYSPETTDFGPIINKI
                     ISAKADVLLGGGHYSDGATLARQLYDHKARLKWVTLLVAPDSPNFVTLGDAAVGISVP
                     SQWEPQVSFKPDFGPTAAEFTQRFQAEFAIEPGYHAAAGYAAGLLLQHAIEQAGTLDQ
                     AKVADVLNKMDVTTMFGRTKFSTAPKEHGLQIGHEMVLAQWQKKDGKLVKEVIWPKAA
                     KTADILY"
     gene            1512..2372
                     /locus_tag="VIQ50_09510"
     CDS             1512..2372
                     /locus_tag="VIQ50_09510"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9360660.1"
                     /translation="MIGLIASLIDGVLVGAVYGLAAMGLTLIWGVMNVINLTHGAMIV
                     LGMFALYFLASALGLPPYGAVPVTIVIGFVVGVVVYWTAVHRVIGRGHLMSLLSTFAI
                     NMVLIGLGTALFSTSPYNVPVALPGITWREYTFTGAHVVAAALALLIAGSLYLLLHRT
                     RIGKAIRAVADDRQAAELNGIPTTQVLSFAFGLGAALAAVSGTLIATLFPFNVLSGGA
                     YELKSFVVTVLGAMGNPAGALMGGVALGLIEGAATSFMPVSWTPVIEFALFVAVLILF
                     PRGVFAFTRS"
     gene            2377..>2684
                     /locus_tag="VIQ50_09515"
     CDS             2377..>2684
                     /locus_tag="VIQ50_09515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360661.1"
                     /translation="MTVQELSPSVAEVAAQQPAERRRAPLWRRPFTWLIVLVGLAFAL
                     LPAWSDNVQLRESLSLAAVYITLASSLNIMLGCGYVNFGNIVFFGLGGYICVYLVSER
                     L"
BASE COUNT          493 a          860 c          815 g          516 t
ORIGIN      
        1 aggcgcagga ggggatgcgg gcctttatcg aaaagcgcgc gccgaagtgg tgacccggat
       61 tacgcgtagc gacccgccgc ccaatactat cggtagcagc aagcgcaccg ccgcaagggc
      121 gccgcgaggt ttcgcttgat gtgaggcccc aaaaccggcg gcggagagca tctacaggaa
      181 atctacagga aaaaacgagc cgggctgcaa gcctttttgt ctcgcttgct gctagccacg
      241 gcccatgacc cttcccagac tgatgctgat cgccgctgcg gcgttggcgg cgtgctcaca
      301 gacctacgca gccgacgaca ccttgaccat cggctttacg gtgtcgcgca caggcaaact
      361 caataacgag tcgaccgcgc agatgcgcgg cttcgagttg tggcgcgacg aagtaaacgc
      421 caaaggtggt atcgcggccg gcgataagcg gtacaaggtt agtttagtca gctacgacga
      481 cgagtccgcg aaccagcgcg tacaacagct ctacacccgc atcatcaacc aggacaaagc
      541 gcaattcctc ttcagcccgt actcctcggg tctggtggcg acggcggcaa tcgtttccga
      601 gcagcatgga agaatcatgc tgaccaccgg cgctgcggag gaaaagactt acaagctggg
      661 caacaagaat ctgttccagg tgtattcgtc ggccgatctg tacctggccg gcgccattca
      721 ggtcgtgaag gagctctatt ccaaggccga acccgcgctc gtttacaagg acgatccgtt
      781 gtccaaggcg gtgctccagt ccgcccgcaa acaagtggcc gaggcgggat tgagaacggc
      841 gctagacgag gcatacagcc cagagacaac cgacttcggt cccatcatca acaagatcat
      901 ttcggcaaag gcggacgttc tcctgggcgg cggccattat tccgacggcg caacattggc
      961 gcgccaactc tatgaccaca aagcgagact taaatgggtg accctgctcg tggctcccga
     1021 cagcccgaat ttcgtcacgc tgggcgacgc cgcggtcggg atttcggtcc cctcgcaatg
     1081 ggagccgcag gtctcgttca agcccgactt cggcccgacc gccgcggagt tcacgcagcg
     1141 attccaagcc gaattcgcaa tcgagcccgg ctaccacgcg gccgccggct atgcggcggg
     1201 tcttctgctc cagcacgcca tcgagcaggc cggcacgctc gatcaggcca aggtcgccga
     1261 cgtcctcaac aagatggatg tcaccaccat gttcggccgc accaaattct cgaccgctcc
     1321 caaggaacac ggcctgcaga tcggtcacga gatggtgctt gcccaatggc agaagaagga
     1381 cggcaagttg gtcaaggaag tcatctggcc gaaggctgcc aaaaccgcgg acattctcta
     1441 ttgatattgc cggcaatgac ggaaggctgc ttcccgcctt ccgctcatcg cgcgcgacgc
     1501 gaccatcgga aatgatcggc ctcattgcat cgcttatcga tggcgtgctc gtgggcgcgg
     1561 tctatggcct cgcggccatg gggctgacgc tgatctgggg cgtcatgaac gtaatcaacc
     1621 tcacgcatgg cgccatgatc gtgctcggca tgttcgcttt gtatttcttg gcgtccgcgc
     1681 tcggcctgcc gccttacggc gcggtgcccg tcaccatcgt catcggcttt gtcgtcggcg
     1741 tggtggtcta ttggaccgcc gtgcaccgcg tgatcgggcg ggggcatctg atgagcctgc
     1801 tctcgacctt cgccataaat atggttctga tcgggctggg cacggcactg ttcagcacca
     1861 gcccttacaa tgttccggtt gcgttgcccg ggatcacctg gcgcgaatac accttcaccg
     1921 gcgcgcacgt ggtcgcagcc gctctcgccc tgctgatcgc cggctcgctc taccttctgc
     1981 tccaccgcac gcgcatcgga aaagcgatcc gcgcggttgc cgatgaccgc caagcggcgg
     2041 agctcaacgg catcccgacg acgcaggtgc tgtcctttgc gttcggattg ggcgcggccc
     2101 tcgcagccgt ttcaggcacg ctgatcgcga ccttgtttcc cttcaacgtg ctgtcgggcg
     2161 gcgcctacga gctcaagagc ttcgtcgtca ccgtgctcgg cgcaatgggc aatccggcag
     2221 gcgcgctcat gggcggtgtt gcgctcgggc tgatcgaggg cgcggcgacc tcgttcatgc
     2281 cggtgagctg gacgccggtc atcgaattcg cgctgttcgt cgcggtactg atcttgttcc
     2341 cccgcggcgt cttcgcgttc accaggtcct gagccgatga ccgtgcagga actctcccca
     2401 agcgtcgcgg aagtcgcggc gcagcaaccg gccgaacgtc gccgcgcgcc gctctggcgg
     2461 cgccctttca cgtggctgat cgtgctggtc gggcttgcct tcgcgctcct gccggcctgg
     2521 agcgacaacg tgcagctgcg cgaaagcctg tcgcttgcgg cggtctacat caccttggcc
     2581 agcagcctga acatcatgct cggctgcggc tacgtgaatt tcggcaacat cgtctttttc
     2641 ggcctcggcg gctacatctg cgtttatctg gtgagcgagc ggct
//
LOCUS       DATCWM010000489         8706 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_414081, whole genome shotgun sequence.
ACCESSION   DATCWM010000489 DATCWM010000000
VERSION     DATCWM010000489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8706
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_414081"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..751)
                     /locus_tag="VIQ50_09520"
     CDS             complement(<1..751)
                     /locus_tag="VIQ50_09520"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HEY9360662.1"
                     /translation="MLFEYLKALVLGVVEGLTEFLPVSSTGHLLLVQRFFGFDDDDFG
                     KTFAVLIQFGAILALLSIYFSRIWRLATGMFSDPAARRFVIGVLIAFLPAAVVGALAH
                     DFIKSVLFNVWIVCFTLILGGAILLWVDRMDLDTRYHDATKFSLPMYLGTGLAQCVSM
                     IPGVSRSGATIVAAMLLGADRRSAAEFSFWLAMPTMAGAFAYDLFKSRGQMSLDNSIL
                     VAFGFAVSFVCAWIVVKTFLDYVQHHGFALFA"
     gene            967..1659
                     /locus_tag="VIQ50_09525"
     CDS             967..1659
                     /locus_tag="VIQ50_09525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEY9360663.1"
                     /translation="MLTLFHHPFCPHSRFVRLALGEYGIAARTVEERVWERRQEFLIL
                     NPACTTPVAVEEGRPAIPGASIIAEYLDETRGADLGELRLLPREPGSRVEVRRLMSWF
                     NEKFFAEVSGPLTMERLYKRQMPTSAGGGSPDTEVIRAARHNMRYHLAYIGWLVRTRD
                     WLAGARMSYADLAAAAHLSAADYLGDVPWNEDEAAKTWYAQIKSRPSFRPILAETLAG
                     IPPSETYADLDF"
     gene            1656..2801
                     /gene="queG"
                     /locus_tag="VIQ50_09530"
     CDS             1656..2801
                     /gene="queG"
                     /locus_tag="VIQ50_09530"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0052693 - epoxyqueuosine reductase
                     activity [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HEY9360664.1"
                     /translation="MSDPPALKAALANAAHQHGFDVVGITRPDSIPQALERLRHFLAE
                     GAHGDMDWMATTAARRGSPSALWPQVRSVIMLGLNYGQLLDDDPLAILARHDRGAISV
                     YARAADYHDIIKPRLKALARWLIAQAGGDVKVFVDTAAVMEKPLAAAAGLGWQGKHTN
                     LVSRQFGSWLFLGAIFTTLELPVDAAEIDHCGSCRACLDVCPTAAFPAPYRLDARRCI
                     SYLTIEHKGPIPRELRGAIGNRIFGCDDCLAVCPWNKFAQAGRESKLAAREDLAAPRL
                     ADLARVDDAAFRKMFSKSPVKRTGRNRFVRNVLIAIGNSGDAALAPEAIRLLDDPSAL
                     VRGAAVWALSRLMSPKPFAALARDRRPHESEPLVAAEWTAALAPTAA"
     gene            2801..3754
                     /locus_tag="VIQ50_09535"
     CDS             2801..3754
                     /locus_tag="VIQ50_09535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEY9360665.1"
                     /translation="MTTVVCLGLGYCARHYVSEFGARFHRVVGTARNADRAAALARDR
                     LGGRPVEILPFDGTSSSRELRAAILAADALLVSAAPADGRDPVLAVLEPDIAQAPRLK
                     SVVYLSSLGVYGDSGGAWIDETTPTIPALARRGEPRIKAELDWQALGSRRRLPVAIFR
                     LGGIYGPGRNGMVRLLRGTVHRIAKPGHVSNRIHVYDIAQAIDAAFMRCAVGVFNIVD
                     DEPASPSDQLAFAADLIGIEPPPEIPYEAAGKSVSAMALSFYDGCIRARNDKLKALLG
                     VQLRYPTYRDGLRALHSAGDHLAANPVENAPRPASSTTGVK"
     gene            3751..4095
                     /locus_tag="VIQ50_09540"
     CDS             3751..4095
                     /locus_tag="VIQ50_09540"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008873131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEY9360666.1"
                     /translation="MIAVIFEVWPKPGHKQRYLDLAAELRPLLDTVDGFISVERFESI
                     YEPGKMLSLSFFRDEAAVNQWRNLEAHRRAQALGRGEIFGDYRLRIAGVIRDYGMSDR
                     AEVPADSRSKHG"
     gene            complement(4103..4876)
                     /locus_tag="VIQ50_09545"
     CDS             complement(4103..4876)
                     /locus_tag="VIQ50_09545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY9360667.1"
                     /translation="MSDVCPKFLSVGTGIAARQIAVRRRDGAPPGLFWLGGFKSDMKG
                     TKAEALDRWAQANGRAMTRFDYSGHGESGGNFTDGTIGRWFEETLAVFEAFCREPHIV
                     IGSSMGGWLALLLTRELTLRTPADPRVMRLVLVAPAVDFTEELMWKRFPPEIKREIEE
                     TGVWARPSQYSEEPYPITRGLIEDGRQHLLLDGMIETGCAVRILQGVQDPDVPWQHTL
                     DLTSRFARDDVVLTLVKDGDHRLSRPEDIERLIAAVAES"
     gene            5001..6197
                     /locus_tag="VIQ50_09550"
     CDS             5001..6197
                     /locus_tag="VIQ50_09550"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY9360668.1"
                     /translation="MSDDTQAHPTLAGATILQIVPDLREEPVARTALDVAATLRQTGA
                     RALVAAEEGPLIAELTASGGEWVPLVNATVNPFRLRRSARALQRLIASERVDIVHAQS
                     AGGAWIASLVARRIAVRLVTTLPDVPPAFGLRGYWAAALTRGDWVITPSNFAAAPLVT
                     RYNIPRERLTIIPRSIDIDAFDPAAVDAARVDTLRKAWRLPQAARILLVPGRIAPWNG
                     QLILPDVARVMLDSGLRDFVFVLAGERRRHRKYAQAVVQQAQAKGVQALVRLTGHCRD
                     MPAALAAADTVVVPATEPPVLGRVVAQAQAMGRPVVTSDVGILPEYVVAPPEMPEEVR
                     TGWVAKRGDAQEFALALSEAFALDDGAYHTMAARARHFAEYMFSPRSVATATHAVYTA
                     LLERDL"
     gene            6325..6864
                     /gene="infC"
                     /locus_tag="VIQ50_09555"
     CDS             6325..6864
                     /gene="infC"
                     /locus_tag="VIQ50_09555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HEY9360669.1"
                     /translation="MRRPMRSAQPAPKDGPRINEEIRVREVQLIDQTGHNHGPVEIQI
                     ALDKAQEAGLDLVEIAPNSSPPVCKILDYGKYKYQAQKKAAEARKKQKVVEVKEIKLR
                     PMIDDHDYDVKMRSMQRFFEEGDKVKVTLRFRGREMAHQELGYQLLNRVKDDTSKVAK
                     VEQEPRFEGRQVVMVLAPR"
     gene            7116..7316
                     /gene="rpmI"
                     /locus_tag="VIQ50_09560"
     CDS             7116..7316
                     /gene="rpmI"
                     /locus_tag="VIQ50_09560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HEY9360670.1"
                     /translation="MPKLKTKSGAKKRFKVTASGMVLYQQSRKRHGMIKRTNKQIRQL
                     RGTSVLFKTDGDKIKKFFLPND"
     gene            7379..7738
                     /gene="rplT"
                     /locus_tag="VIQ50_09565"
     CDS             7379..7738
                     /gene="rplT"
                     /locus_tag="VIQ50_09565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011155609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HEY9360671.1"
                     /translation="MARVKRGVTGHAKHKKIFKAAKGYYGRRKNTIRVAKQAVEKANQ
                     YAYRDRKRRKRTFRALWIQRLNAAVRPFGLTYSRFIGGLDKAGLVVDRKVLSDLAIRE
                     PAAFAAIVEKAKAAIAV"
     gene            7794..8294
                     /locus_tag="VIQ50_09570"
     CDS             7794..8294
                     /locus_tag="VIQ50_09570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013216809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEY9360672.1"
                     /translation="MIDVSYVQCMARYNRWQNDNVYRVADSLSDAERRRDRGAFFGSI
                     HATLNHLLWADRIWMSRLADTAPPGGGIPESVSLYADWGDLKRDRKAFDAVMIDWADR
                     LDAASLASELAYYSGAIKAHLRKPKWLLVAHMFNHQTHHRGQVHCMLTQAGGRLGDTD
                     LPFMPT"
     gene            8323..>8706
                     /locus_tag="VIQ50_09575"
     CDS             8323..>8706
                     /locus_tag="VIQ50_09575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019963617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske (2Fe-2S) protein"
                     /protein_id="HEY9360673.1"
                     /translation="MHDLKAQLLRGLWYVALVGAQVRPGRLVHKTLLGEPLLIGRGRD
                     GRVFALRDICPHRGIPLHYGRFDGETITCCYHGWRFDMGGTCVEIPSLRDGQAMDLGK
                     IRCGAYACIERQGLVWVYFPAANEAA"
BASE COUNT         1677 a         2845 c         2724 g         1460 t
ORIGIN      
        1 aggcaaacaa agcaaagccg tggtgctgca cataatcgag aaacgtcttc accacgatcc
       61 aagcgcacac gaacgacacc gcaaatccga atgccacgag aatgctgttg tcgaggctca
      121 tctggccgcg gctcttgaag agatcgtagg cgaacgcccc ggccatggtg ggcattgcga
      181 gccagaacga gaattccgct gccgagcgcc ggtcggcgcc cagcagcatg gccgccacga
      241 tggtggcgcc cgagcgcgag actccgggta tcatggatac gcactgcgcc agaccggtgc
      301 cgaggtacat cggcaaggaa aacttcgtgg cgtcgtggta gcgggtgtcg agatccatgc
      361 gatcaaccca cagcaaaatc gcaccgccaa ggatcagggt gaagcagacg atccagacgt
      421 tgaacaagac tgatttgatg aagtcgtgcg caagcgcgcc gaccaccgcg gcgggaagga
      481 atgcgatcag cacgccgatg acgaagcgcc gagcggccgg atcgctgaac atacccgtgg
      541 cgagccgcca aatgcgggaa aaatagatcg acagcagcgc gagaatcgcg ccgaattgga
      601 tcagcaccgc gaaggtcttg ccgaaatcgt catcgtcgaa gccgaagaag cgctgaacca
      661 aaagaagatg gccggtcgag gacaccggca ggaactcagt gagcccctcg accaccccga
      721 ggacgagggc cttcaaatat tcgaacaaca tgacgggctc cgcgagcaga gggggacaga
      781 cgcgccgcgg cgggcgcggg aggtccagga gatgcgcttt tcccgcatca ttaacctagg
      841 ggcaacggga aacggcgaca ttgcacaggt tgctcccggc cgaccctacc caagggatcg
      901 agagcgacct aacgtgaccg gcgccgcggc cgcgcgcccc aacatcgccg cagtcattaa
      961 gagcccatgc tgaccttgtt ccatcatccg ttctgcccgc actcccgctt cgtgcgcttg
     1021 gcgctcggcg agtatgggat cgctgcgcgg acggtcgagg agcgcgtgtg ggagcgccgc
     1081 caagagttcc tgattctcaa ccctgcctgc acgaccccgg tcgcggtgga agagggccgt
     1141 ccggcgatcc cgggggcgtc gatcatcgcc gaatatctgg acgagacacg gggggcggat
     1201 cttggcgagc tacgcctgct gccgcgcgaa ccggggtcgc gagttgaagt tcgccgactg
     1261 atgagctggt tcaacgagaa attttttgcc gaagtcagcg gcccgctgac catggaacgt
     1321 ctatataagc gccaaatgcc gacgagcgca ggcggcggct caccggacac cgaggtgatc
     1381 cgagcggcgc ggcacaacat gcgctatcat ttggcgtata ttggatggct ggtgcgcaca
     1441 cgcgactggc tcgcaggcgc tcggatgagt tacgcggatc tcgccgcagc cgcgcacctc
     1501 tcggcagccg attacctagg cgatgtgcca tggaacgaag acgaggcggc gaagacctgg
     1561 tacgcgcaaa tcaagtcgcg gccctcgttt cgtccgatcc tggcagagac gctggcgggc
     1621 attccgccgt ccgagaccta cgccgatctc gacttttgag cgatccgccg gcgctcaaag
     1681 cagcgctcgc taacgccgcg caccagcacg gcttcgacgt ggtcggcatc acgcggcctg
     1741 actcgatccc ccaagcgctg gagcggctgc ggcatttcct cgccgaaggc gcccacggcg
     1801 atatggattg gatggcaaca accgcagcac ggcggggcag tccgagcgcg ctctggccgc
     1861 aggtgcgctc ggtcatcatg cttggcctga actatggcca actccttgac gacgatccgc
     1921 tggccatcct ggccaggcac gatcgcggcg cgatttcggt ctacgcgcgg gccgcggact
     1981 accacgacat cattaagccg cggctcaagg cactggcgcg ttggctgatc gcgcaagcgg
     2041 ggggcgacgt gaaggtcttc gtcgataccg cggcggtgat ggagaagccg ctggctgcgg
     2101 ctgccggcct cggctggcag ggcaagcata ccaatttggt ttcgcgccaa ttcggatcat
     2161 ggttgttcct cggcgcgatc ttcacaacgc tcgaactacc cgtcgacgcg gccgagatcg
     2221 atcattgtgg cagctgccgt gcgtgtctcg atgtgtgccc gaccgccgcc ttccccgcgc
     2281 cctaccggct cgacgcgcgc cgctgcatct cctatctcac catcgagcat aagggcccga
     2341 ttccgcggga gctacgcggc gcgatcggca atcgcatctt cggctgcgac gattgtctcg
     2401 cggtatgccc ctggaacaaa ttcgcgcagg ccggccgcga gagcaagctc gccgcgcgtg
     2461 aggatctggc ggctccgcga ctcgccgatc tcgcccgtgt cgacgatgcc gcgttccgaa
     2521 agatgttttc gaagtcgccg gtcaagcgca ccgggcgtaa ccggtttgtg cgcaacgtgc
     2581 tgatcgcgat cggaaattcc ggcgatgcgg cgcttgcacc ggaagccatc cggctattgg
     2641 acgatccctc ggcgctggtg cgcggcgcgg cggtgtgggc gttgagccgg ctcatgtcac
     2701 ccaaaccctt tgcggcattg gcaagagatc gtcgcccaca cgagagcgag ccgttggtgg
     2761 cagcggaatg gacggcggcg ctcgcgccga cagcggcctg atgaccacgg tcgtttgtct
     2821 cgggctcggc tactgcgcgc gccattacgt cagcgaattc ggcgcacgtt tccaccgtgt
     2881 cgtggggacg gcgcgcaacg ccgaccgcgc cgccgcgctc gcccgagacc gtctcggcgg
     2941 caggccggtc gagatactcc cattcgatgg aacgtcgtcg tcgcgcgagc tccgggccgc
     3001 gattttagca gccgatgcgc tgctcgtatc ggccgccccg gcggacggcc gggatccggt
     3061 gctcgcggtg ctcgaacccg acattgccca ggccccgcgg ctcaagtccg tggtctatct
     3121 ctcaagcctt ggcgtctacg gcgacagcgg cggcgcctgg atcgacgaaa ccacgccgac
     3181 cattcccgcg cttgcccgcc gcggtgagcc ccgcatcaag gccgaactcg attggcaggc
     3241 acttgggtca cgacgaagac tgccggtggc aattttccgc ctcggcggca tctacggtcc
     3301 ggggcgcaac ggaatggtgc gcctgttgcg cggcaccgtg caccgcatcg ccaaacccgg
     3361 acacgtctcg aaccgcattc atgtctacga catcgcccag gcgatcgatg cggccttcat
     3421 gcgctgcgcc gtgggcgtgt tcaacatcgt ggatgacgag ccggcctcgc cgagcgatca
     3481 gctcgcattt gcggctgatc tcatcggaat cgaaccgcct ccagaaatcc cctatgaggc
     3541 cgcgggcaaa tcggtgtcgg cgatggcgct gagcttctac gacggttgca ttcgcgcgcg
     3601 caacgacaag ctcaaggcgc tgctcggcgt tcaactgcgc tatccaacct atcgcgacgg
     3661 cctgcgcgcg ctccacagcg ccggcgacca tctcgccgcc aatccggtcg aaaacgcacc
     3721 ccgccccgct tcctcaacga caggtgtcaa atgatcgcgg tcatctttga agtttggcca
     3781 aagcccgggc acaaacagcg ctatctcgat ctcgccgcgg agctgcggcc gctcctcgac
     3841 acggtcgatg gtttcatctc ggtcgaacga ttcgagagca tctacgagcc cggcaaaatg
     3901 ctttcgctct cgttcttccg cgatgaggcg gcggtgaacc aatggagaaa tctcgaagcg
     3961 catcgtcgcg cacaggctct cggtcgcggc gaaattttcg gcgattatcg attgcggatc
     4021 gcgggcgtga tcagagacta cggcatgtct gatcgcgcgg aagttcccgc tgacagtcgt
     4081 tccaaacacg gctagccgcg cgttacgact ccgctaccgc cgcaatgagc cgctcgatgt
     4141 cttccgggcg cgacaagcga tggtcgccat ccttcacgag tgtcagcacg acgtcgtcgc
     4201 gagcaaagcg agaagtcaga tccagtgtat gctgccacgg cacgtcggga tcctgcactc
     4261 cctgcagaat ccgcaccgca cagccggtct cgatcatgcc gtcgagcagg agatgctgcc
     4321 gtccgtcctc gatcaggccg cgggtgatcg ggtagggctc ttcggaatac tgcgacgggc
     4381 gcgcccagac gccggtctcc tcaatctcac gcttgatctc cggcggaaac cgcttccaca
     4441 tcaactcttc ggtaaagtcg accgcggggg cgactaacac gagccgcata acgcgcgggt
     4501 ctgccggcgt gcggagcgtc agttcgcgcg tcagcagcag cgcgagccaa ccccccatcg
     4561 acgagccgat cacgatatgc ggttcgcggc aaaacgcttc aaatacggcg agcgtctcct
     4621 caaaccagcg gccgatggtg ccatcggtga aattcccgcc ggactcgccg tggccggagt
     4681 aatcgaagcg cgtcatcgcc cggccattcg cctgcgccca tcgatcgagt gcctcggcct
     4741 tggtaccttt catgtcggac ttgaaaccgc cgagccagaa caggccaggg ggcgctccgt
     4801 cgcgacggcg cacagcgatc tgtcgggccg caataccggt tccaacgctc aagaatttcg
     4861 ggcaaacatc gctcatcggc ggagactgac cttcggggca cgattgcatt gggcatcggt
     4921 cctattcggc cgcgtgctgc cattgaatac aagcatgccg gagcggcaaa caagccggcg
     4981 ccggccaagg aatgaactcc gtgagcgacg acacgcaggc tcaccccacc ttggctggcg
     5041 cgacgatcct gcagatcgtc ccggatttgc gcgaggagcc cgttgcccgc actgcgctcg
     5101 acgtggccgc cacactacgg caaaccggcg cgcgcgcgct ggtggcggca gaagaaggcc
     5161 cgctcattgc cgagctcacg gcatcgggcg gcgaatgggt tcccctcgtc aatgccaccg
     5221 tcaatccatt ccggctcaga cggagtgccc gcgctctcca acgtctgatc gcctccgagc
     5281 gcgtcgacat cgtgcacgcg caaagcgccg gcggagcttg gatcgccagc ttggtagcga
     5341 ggcggatcgc ggtgcggctc gtcaccacgc tgcccgacgt gccgcccgcc ttcgggctgc
     5401 gcggctattg ggccgccgcg ctcacgcgcg gagattgggt gatcacccct tcgaacttcg
     5461 ccgctgcacc cctcgtcacg cgctataaca ttccgcgcga gcgcctcacc atcattccgc
     5521 gcagcatcga catcgacgca ttcgatcccg cggcggttga cgcggcgcgg gtcgatacct
     5581 tgcgcaaggc gtggcgactt ccgcaggcag cgcggatcct gctcgttccc gggcgcatcg
     5641 cgccttggaa tgggcaactc atcctgcccg atgtcgcgcg agtcatgctc gacagcggtc
     5701 tgcgcgattt tgtcttcgtg ctcgctggcg agcgtcgcag gcatcgcaag tatgcacaag
     5761 ccgtggtgca gcaggcacag gccaaagggg tgcaggcgct ggttcggcta accggccatt
     5821 gccgcgacat gccagcggcg cttgccgccg ccgacaccgt ggtggttccc gcgacggagc
     5881 cgccggtact cggccgcgtg gtggcgcaag cacaagccat ggggcggccg gtcgtcacct
     5941 cagacgtcgg catcttgccg gaatacgtcg tcgcgccgcc ggaaatgccg gaagaggtgc
     6001 gcacggggtg ggtcgccaag cgaggcgatg cgcaagaatt cgccctcgcg ctgagcgagg
     6061 cattcgcgct cgacgacggc gcctaccata ccatggccgc acgcgcgcgg cattttgccg
     6121 aatacatgtt ttccccccgc agcgtcgcca ccgcaaccca cgccgtctat accgcgttgt
     6181 tagaacgcga cctttagcaa tcgtagatag gcgcacgccg cggccacgga ccgacggaaa
     6241 gccgttgact tattcgcggt ttgtcctgat ccttcccggg cctgcaccag caggacgttg
     6301 caacggcatg aggagagcaa agccattcgt cgcccaatga gatccgcgca gcccgccccg
     6361 aaggacggcc cgcgcatcaa cgaggagatc cgtgttcgcg aagtccaatt gatcgaccag
     6421 accggccaca atcacgggcc cgttgagatc cagatcgctt tggacaaagc ccaggaagcc
     6481 gggctggacc tcgtcgagat tgcccccaat tcatctccgc ccgtctgcaa aattctcgat
     6541 tacggcaaat ataaatatca ggcgcagaaa aaggcggcag aagcccgcaa gaaacagaag
     6601 gtcgtcgagg tcaaggagat caagcttcgg ccgatgatcg acgaccacga ttacgacgtg
     6661 aagatgcgct cgatgcagcg ctttttcgaa gagggcgaca aggtgaaagt cacgctgcgc
     6721 ttccgcgggc gcgagatggc acatcaggaa ctcggttacc agttgctcaa ccgcgtcaag
     6781 gacgacacct ccaaggtcgc caaggtcgag caggaaccgc gcttcgaagg ccgacaggtg
     6841 gtgatggtgc tggcgccgag gtgaccccct cggccgcgcg cctgcacgag caagagccgg
     6901 ccaaggcttg attcaagtcc ccctgtgctc ctcgcggacg gccgtttagc ggatgaaacc
     6961 gggttctggt tgtatttcgc ggccggctct gccataacgc cgcccttccg tggcccggcc
     7021 caaagggctg ccgtggcgac ggcacaatca gcatgctcga acgagcagaa gccggccggg
     7081 cggttttcat gcctgccgcc gcaaaggaga gccaaatgcc caagctcaag accaaatccg
     7141 gcgccaaaaa gcgcttcaaa gtgaccgcca gcgggatggt gctctatcag caatcccgca
     7201 agcgccacgg catgatcaaa cgcaccaaca agcagatccg gcagctgcgc ggcacctccg
     7261 tgctgttcaa gaccgacggc gacaagatca agaaattttt tctgcccaac gattgacacc
     7321 gtagggcccc gcggcggcga gccgcacccg atcgttgcac gcaaccagga ggtcagccat
     7381 ggcacgcgtc aagcgcggcg tcaccgggca cgccaagcac aagaagattt ttaaagcggc
     7441 caagggctat tacggccggc gcaagaacac gattcgcgtc gcaaagcagg cggtggagaa
     7501 ggccaaccaa tacgcctacc gcgaccgcaa gcgccgcaaa cgcaccttcc gcgcgctctg
     7561 gatccagcgg ctcaatgcag cggtgcgtcc ctttggactc acttacagcc ggtttattgg
     7621 cggcctcgac aaagcgggac tggtcgtcga ccgcaaggtg ctatccgatc ttgcgatccg
     7681 cgagcccgcg gcgttcgcgg cgattgtcga aaaggcgaaa gcggccatcg cggtatgaca
     7741 atgacaggac ggacaatgca cgagcgatgg tcatccatgc ttcgaacgcg accatgatcg
     7801 acgttagcta tgtgcaatgc atggcgcgct ataaccgctg gcaaaatgac aacgtctatc
     7861 gtgtggccga ctcgctgtct gacgccgagc ggcgacgcga ccggggagca tttttcggtt
     7921 cgatccacgc gacgctcaat cacctgcttt gggctgatcg catctggatg agccgccttg
     7981 ccgacacggc accccccggc ggcggcattc ccgaatccgt atcgctctat gccgactggg
     8041 gcgacttgaa gcgcgaccgc aaagcattcg atgcggtcat gatcgactgg gcggaccggc
     8101 tcgatgcggc atcgctcgcc agcgagctcg catattactc cggtgcgatc aaagcgcact
     8161 tgcgcaagcc gaaatggctt ttggtcgcgc acatgttcaa tcaccagacc catcatcgcg
     8221 gccaggtgca ttgcatgctg acgcaggcgg gcggcaggct cggcgatacc gatctgccgt
     8281 tcatgccgac gtaacgaccg ggaaaccccc ggggacgcac ccatgcacga tctcaaggcc
     8341 caacttctgc gcggtttgtg gtacgtcgcg ctcgtgggcg cgcaggtgcg tcctggccgg
     8401 ctcgtacaca agacgctgct gggcgagccg ctgctcatcg gccgcggtcg cgacggacgg
     8461 gtttttgccc tgcgcgacat ctgcccgcac cggggcatcc ctctgcatta tggccgcttc
     8521 gacggcgaga cgatcacgtg ctgctatcac ggctggcgtt tcgacatggg cggcacctgc
     8581 gtcgagattc cctcgctacg ggatggccag gcaatggatc tcggcaagat tcgctgcggc
     8641 gcttatgcct gcatcgagcg gcagggcctg gtctgggtct acttcccggc cgcgaacgaa
     8701 gcggcc
//
LOCUS       DATCWM010000490         2240 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_279086, whole genome shotgun sequence.
ACCESSION   DATCWM010000490 DATCWM010000000
VERSION     DATCWM010000490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2240
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_279086"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..956
                     /locus_tag="VIQ50_09580"
     CDS             <1..956
                     /locus_tag="VIQ50_09580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005216 - monoatomic ion channel activity
                     [Evidence IEA];
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cyclic nucleotide-gated ion channel"
                     /protein_id="HEY9360674.1"
                     /translation="KARWKFVTSPLGVIDLLAVLPFWFALVLPADLRVLLVFRMVRFL
                     KLARYSPAMRSLLDVLYNERRALFGCFVILLGATLVAASIMHVIESHAQPEKFGTIPD
                     AMWWAIVTLGTIGYGDVVPVTALGRIVASVTIFVGLIMVALPIGIVATAFAEEIHRRD
                     FVVTWGMVARVPLFAELEATEIADIMRLLHAQQVEAGDVITRRGEVAHSMYFVANGEV
                     EIELKHERVRLGTGHFFGEIAALRRTRRSATVTAVKRSSLLVLDAHDLRVLMDRDSRI
                     AERIHEVARTRLGGEALTPKGDLVAEELEDVETLHPSVRSR"
     gene            complement(993..1607)
                     /locus_tag="VIQ50_09585"
     CDS             complement(993..1607)
                     /locus_tag="VIQ50_09585"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY9360675.1"
                     /translation="MARFEQRGKKFRAQGQWLKQVEWRSMLETPGELLLREARAADLL
                     VIGRRRSGADPDPGMVLLRVGRPILLVPDAARPLELRRAVIAWKDTRECRRAVRDALP
                     LLQEAKEVLLVEVGEHEGHAPSKETLGDVAAYLVRHRAIVADQVWWPPRGPVAAELFQ
                     FVKDENADLIVAGGYGHSRLGEWIFGGVTRELLAASPVCCMLSH"
     gene            complement(1607..1861)
                     /locus_tag="VIQ50_09590"
     CDS             complement(1607..1861)
                     /locus_tag="VIQ50_09590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360676.1"
                     /translation="MLSADVQRSDLIVQSKTAPPPSLAAVMVHVDLERDCEPRIELAM
                     GLAERLQATLIGVAGCATWPAFMAGDLGLTKSNQYDFQTK"
     gene            complement(1900..>2240)
                     /locus_tag="VIQ50_09595"
     CDS             complement(1900..>2240)
                     /locus_tag="VIQ50_09595"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY9360677.1"
                     /translation="CRRAVRDALPFLHKAEDVLIVGIDEGQSDNPTKGSLSDVAEYLR
                     RHGIAAPREIWRRARGPVGAELLHLVRDESADLIVAGGYGHSRLGEWIFGGVTHELLT
                     SSPVCCMLSH"
BASE COUNT          394 a          712 c          695 g          439 t
ORIGIN      
        1 gcaaggcgcg atggaagttc gtgaccagcc cgctcggcgt catcgacctg ctagcggtcc
       61 tgccgttctg gttcgcactc gtgctgccgg ccgatctgcg ggttctgctg gtatttcgaa
      121 tggtgcgctt tctcaaattg gcgcgctact cgcccgcgat gcgctcgctg ttggacgtgc
      181 tttacaacga gcgccgcgcg ttgttcggct gcttcgtgat cttgctgggg gcgacgctcg
      241 ttgccgccag catcatgcat gtgatcgaaa gccacgcgca gcccgagaaa ttcggcacca
      301 ttcccgacgc gatgtggtgg gcaatcgtca cgctgggtac gattggctat ggcgacgtcg
      361 ttccggtgac cgcgctggga cgcatcgtcg cttcggtcac gattttcgtc ggcctgatca
      421 tggtcgcctt gccgatcggc attgtcgcaa ccgcgttcgc cgaggagatc caccgtcgcg
      481 acttcgtcgt cacctgggga atggttgccc gcgtgccgtt gttcgccgag cttgaggcga
      541 ccgaaatcgc cgacatcatg cggctattgc atgcgcagca agtcgaagcc ggcgacgtca
      601 tcaccagacg cggcgaagtt gcccattcca tgtatttcgt cgcgaatgga gaggtggaaa
      661 tcgagctcaa gcacgagcgc gttcgactcg gcaccggtca tttcttcggc gagatcgcgg
      721 cgctgcgtcg cacgcgcaga tcagcgacgg tgaccgccgt caagcgatcg agcctactcg
      781 tgctcgatgc ccacgacctg cgggtcctga tggatcggga ctcccgaatc gcagaacgta
      841 tccatgaagt ggcccgcacg cggctgggcg gcgaggcact cacgccgaag ggcgaccttg
      901 ttgccgaaga gctcgaggac gtggagacgc tccacccgtc ggtgcgtagc cgttaatgat
      961 gaagcgtgtt cgtgctggca gggctctcat cctcagtgcg agagcatgca acagacgggg
     1021 cttgctgcca gaagctcgcg ggtgacgccg ccgaagatcc attcgcccaa tcggctgtgg
     1081 ccatagccgc cggcgacgat caagtccgca ttctcgtctt tcacaaattg gaagagctcg
     1141 gcggcgaccg gcccgcgtgg cggccaccat acctggtctg caacgatggc ccggtggcgc
     1201 acgagatacg ccgccacgtc ccccaaagtc tccttcgacg gcgcgtggcc ttcatgctcg
     1261 ccgacttcga cgagcagaac ctctttggcc tcctgcagta aggggagcgc gtcgcgtacg
     1321 gcgcggcgac attcgcgtgt atccttccac gctatgaccg cccggcgaag ctcgagcgga
     1381 cgggcagcgt cgggcaccag cagaatgggg cggcccaccc gcagcaaaac catgccgggg
     1441 tcagggtcgg cgccgctgcg ccgccggccg atgacgagca gatccgccgc tcttgcttcc
     1501 cgcaatagca gctctccggg agtttccagc atgctgcgcc attcgacctg tttgagccac
     1561 tgaccttggg cgcggaactt tttgccccgc tgctcgaaac gcgccattat tttgtttgaa
     1621 aatcgtattg gttggatttc gtcagcccga gatctccggc catgaaggcc ggccatgtcg
     1681 cgcaaccggc aactccgatc agcgtggcct ggaggcgctc ggccaagccc attgcgagct
     1741 cgatcctcgg ctcacaatcg cgctcgaggt cgacgtgcac catgaccgct gcaagcgatg
     1801 gcggaggtgc cgttttgctt tgcacgatga ggtccgacct ttgcacatct gcgcttagca
     1861 tgagtgttct cccgcatgaa cgatcgagca tccggactct cagtgagaca acatgcaaca
     1921 gaccgggctt gatgtcagaa gctcgtgcgt gacgccgccg aagatccatt cacccaagcg
     1981 gctgtgtccg tagccgccgg cgacgatcaa atccgcgctt tcgtcccgaa cgagatggag
     2041 gagttcggcg ccaaccggcc cccgcgctcg ccgccaaatt tcgcgcggcg cggcaatgcc
     2101 atgccgccga agatattccg ccacatcgga aagacttcct ttggtgggat tgtccgattg
     2161 gccttcgtcg attccgacga tgagcacatc ttcggccttg tgcagaaacg gaagagcatc
     2221 gcgcacggcg cggcggcact
//
LOCUS       DATCWM010000491         4002 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_165604, whole genome shotgun sequence.
ACCESSION   DATCWM010000491 DATCWM010000000
VERSION     DATCWM010000491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4002
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165604"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..784
                     /locus_tag="VIQ50_09600"
     CDS             <1..784
                     /locus_tag="VIQ50_09600"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9360678.1"
                     /translation="VVIDNRPGAGEVIGTETAARAAPDGNTLLFAANPFVINPHLRKV
                     SYDPLRSFEPVCQLANAPTLIVVTAGSPYHSLADLLEAARAKPGSLTMASIGPGSPFH
                     LGFEKLKRMAKVDMTFVPYPGNGPSVNALLGEHVTMMFGTYANVAEHLKSGKLRAIAA
                     TTPRRIQELPDLPTVAESGFPDYAVPAWFASFAAAKTPKAAVSQLAAWLTAALQAPEI
                     EQKLLIQGLYPAGLCGDELAAYLRDQFDEFGRIIRESNIKAD"
     gene            989..2035
                     /locus_tag="VIQ50_09605"
     CDS             989..2035
                     /locus_tag="VIQ50_09605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360679.1"
                     /translation="MLDVRQVRCSWHARTWLAIAAATALFAAGAAQAQQSPPPSKLPL
                     PNADPPAKRIVTQGLGKIVTEDLIPCANPRPGMNLRKNPVGEITAQDGTKLTVPVDNH
                     FATAPKLPDLYNECSGVTPKDMSEVDLNKVPIVEVDKDGEVITAFMVADNYFELYING
                     QLIGVDSTPYTPFNSQVVRLRVKRPYTIAVLAQDWEDKLGLGMEVFQGNTWHSGDGGF
                     IAKFSDGTVTDSSWRAQSFYIAPLQHPDDVVEYGNIHDTSHLGGRVHPLAKLPTCREH
                     CFAIHYPMPDGWMNPNFDDSKWPRAFEYLDQEVGIVGVPGYWRYPEAFMGARWIWTIN
                     LVFDNTVLFRKTVQ"
     gene            2079..3233
                     /locus_tag="VIQ50_09610"
     CDS             2079..3233
                     /locus_tag="VIQ50_09610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360680.1"
                     /translation="MLRPLGAPALALCLFFMPPVCEAVDTIAATALVPAKLGNVRLIS
                     PAAGQPAALTQSQSDALNAYDAALSQFKSILRQRRAQIESKQPLPNLPGQAIYLARNN
                     MISAYKDLTDAVPSRIGRPNKFGLPPAYFDADNEPLLEEYEALFKIMQAPPANAQSSD
                     TPFKDVVELGTAIARAKGLDAAQAEVAGRISLGIFFAETNGIQNIGNARSNTYKGSMQ
                     AGVSEDQNGQRRWAAVKKSIAAFDPALSARDDKEEARAGNLDHRFNHWTAVRDALTNA
                     HADVFPRIPAIVKALPNPIDQMKLFELIQIIPSPTKAALNSGNLANYRISDPTIMGYL
                     RNNSIFTFGKADRAKTSASFREILNAMWLFDSKFERALAKFNEIKAGKKG"
     gene            3489..>4002
                     /locus_tag="VIQ50_09615"
     CDS             3489..>4002
                     /locus_tag="VIQ50_09615"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEY9360681.1"
                     /translation="MQFLQSRGMLLAAAIAAGGADAQESTAVKELIPTGKLRAGVVFA
                     PAASAFFVVKDANGEPHGVTVDLAGELAKKLGVPVEFMLAANSGLVTDATESGAIDVG
                     FMPMDEERKKRVDFGPAYFMIESTYLATAASGIKTVAEVDRPDVRVVGIANTTTIRAA
                     ARSLKNTTISA"
BASE COUNT          812 a         1280 c         1227 g          683 t
ORIGIN      
        1 cgtcgtgatc gacaaccgcc cgggggcggg cgaggtcatc ggcacggaaa cagccgcacg
       61 cgccgcgccc gatggaaaca cgctcctttt cgcagccaat ccgttcgtca tcaacccgca
      121 cctgcgcaag gtgagctatg atccgctgag gagcttcgag ccggtgtgcc agctggcaaa
      181 cgcgccgacc ctcatcgtcg tgaccgcggg gtcgccctac cactcgctcg ctgatctgct
      241 cgaggcggcg cgcgccaaac cgggcagcct gaccatggcg agcatcggtc cgggcagccc
      301 gttccacctc gggttcgaaa agctcaagcg catggcgaag gtcgacatga ccttcgtccc
      361 gtatccgggc aacggccctt cggtgaacgc gctcttaggc gagcatgtca ccatgatgtt
      421 cggcacctat gcgaacgtgg ccgagcacct gaaaagcggg aagctgcgcg cgattgccgc
      481 gacaacgccc aggcggatcc aagagctgcc tgacttgcca acggtcgcgg aatccggctt
      541 cccggactac gcggtgccgg catggttcgc atcattcgcg gcggcaaaga cgccgaaggc
      601 ggcggtgtcg cagctcgcgg cctggctgac tgcggcgctg caggcgcccg agatcgagca
      661 gaagctcctc atccagggcc tctatccggc cgggctctgt ggagacgaac ttgcggccta
      721 tcttcgcgat caattcgacg agttcggccg catcattcgc gaaagcaaca tcaaggcgga
      781 ttagaccttg gctctgcggc gatggccccg ccatcggcgc ccgctgccgg cgaacgcgcg
      841 caacttgccg cactctattg tcggggctcg acccttcgcc taggctgagc accgcagcat
      901 ccgaatgcgt gcgacagctt aggtgtgggc tagtccgtta gcccgcgggg ggaaaccgca
      961 aaccgacaag gcgagaggag aagggcgtat gctcgatgtg cggcaggttc gatgttcatg
     1021 gcacgcgcgc acgtggctcg cgatcgcagc ggcgacggcg ctgtttgcag caggcgccgc
     1081 gcaggcgcag cagtcaccgc caccctcgaa gttgcctttg ccgaacgcgg atcccccggc
     1141 aaagcgcatc gttacgcagg ggctcgggaa aatcgtgacg gaagacctca ttccgtgcgc
     1201 caacccgcgg ccgggcatga atctgcgcaa aaacccggtc ggtgagatca cggcgcagga
     1261 cgggacgaag ttgaccgtgc cggtcgacaa ccatttcgcg acggcgccca agctgccgga
     1321 cctttacaat gagtgctcgg gcgtgacgcc gaaggacatg tccgaagtcg acctgaacaa
     1381 agtaccgatc gtcgaggtcg acaaagacgg cgaggtcatc accgcgttca tggtcgcaga
     1441 caattacttc gagctctaca tcaacggcca gctcatcggc gtcgactcca cgccatacac
     1501 tccgttcaac tcgcaggtgg tgcgcttgcg cgtaaagcgt ccctatacga tcgccgttct
     1561 ggcgcaggac tgggaagaca agctgggcct cgggatggag gtgttccagg gcaacacctg
     1621 gcattccggc gacggaggat ttatcgcgaa gttctccgac ggcaccgtga cggacagctc
     1681 atggagggcg cagtcgttct acatcgcgcc gctgcagcat cccgatgacg tggtcgagta
     1741 cggcaacatc cacgacacct cgcaccttgg cgggcgcgtc catcccttgg cgaagctgcc
     1801 gacctgccgc gagcattgtt tcgcgatcca ttatccgatg ccggacggct ggatgaatcc
     1861 gaattttgac gactcgaaat ggccgcgggc attcgagtac ctcgatcagg aggtcggtat
     1921 cgtaggcgtg cccggctact ggcgctatcc agaggcattc atgggcgccc gctggatctg
     1981 gaccatcaat cttgtgttcg acaatacggt gctgttccgc aagacggtgc aatagccctc
     2041 ggctgccgcg cgggcaggtc gatcggcgga gcgccccggt gttgcggcca ttgggggcgc
     2101 cggcgcttgc gctctgtctc ttcttcatgc cgccggtttg cgaagccgtc gacacgatcg
     2161 ccgccaccgc gctcgtgccg gccaagctcg gcaatgtacg cctgatctcc cccgcagcgg
     2221 gtcagccggc agcgctcacg caatcacagt cggacgcgct caacgcctac gacgccgcgc
     2281 tgagccaatt caaatcgatc ttgcgccagc gccgcgcaca gatcgaatcc aagcaaccgc
     2341 tgccgaattt gccgggacag gcgatctatc tcgcccgcaa caacatgatc agcgcctaca
     2401 aggacctgac cgacgcggtt ccctcccgaa tcggcaggcc gaacaaattc ggacttcctc
     2461 cggcgtattt cgacgccgac aatgagccgc ttctcgagga gtacgaggcg ctgttcaaga
     2521 tcatgcaggc gccccccgcc aatgcgcaaa gctcggacac tccattcaaa gacgtggtcg
     2581 agctcggaac cgccattgcc cgcgccaagg gcctcgacgc cgcacaggcc gaagtcgcgg
     2641 gccgtatcag cttgggcatc ttctttgccg agaccaacgg catccagaat atcggcaatg
     2701 cgcgctcgaa tacctacaag ggaagtatgc aagcgggcgt atcagaggat caaaatggac
     2761 aaaggaggtg ggcggcggtc aagaaatcga tcgcggcctt cgatcccgcg ttgagcgcgc
     2821 gcgatgacaa ggaagaggcg cgggcaggca atctggatca tcgattcaat cactggaccg
     2881 cggtgcgaga cgcgctcacg aacgcccatg cagacgtctt cccgcgcata ccggcaatcg
     2941 tgaaggcatt gccaaatccg atcgatcaaa tgaagctgtt cgagctcatt cagatcattc
     3001 ccagtcccac caaggccgcg ctcaattccg gcaatctggc caactacagg atttccgacc
     3061 cgacgatcat gggatacttg cgcaacaata gcatcttcac tttcggaaaa gccgaccggg
     3121 cgaaaacgtc ggcaagcttc cgcgaaattc tcaacgcgat gtggctgttc gacagcaaat
     3181 tcgaacgggc gctcgccaaa ttcaacgaga tcaaggcggg gaagaaggga tgagcggcgg
     3241 cgccgatagc cgcccgccgt tgccgaatgc gtaatagcta tgccgcggcg gcgaccgcgt
     3301 tgcgggtcgc ctcaccgctc cataacccgg tcctccgcgt gacgagctgc tcgagtgatc
     3361 gtaaccggac atttcaccca tggccgtccg gcgcgtgaca tccgcggcag agtattcaaa
     3421 ctggtgatac cgtgggaaaa aggctatgag ctcttcgtga gaaaattgaa gtcggagggg
     3481 aagcattgat gcaattcttg caatcgcgcg gaatgctatt ggctgcggcc atcgccgccg
     3541 gaggcgccga cgcgcaggag agcacggcag tgaaagagct catccccacc ggcaagctgc
     3601 gcgccggggt cgtcttcgcg cccgccgctt cggccttctt cgtcgtgaag gatgcaaacg
     3661 gcgagccgca cggcgttacc gtcgaccttg ccggcgagct tgcgaagaaa ctcggcgtgc
     3721 cggtggagtt catgctggca gcgaactccg gcctggttac cgacgccacc gaatccggcg
     3781 cgatcgacgt cggcttcatg cccatggacg aggagcgtaa gaagcgcgtc gacttcgggc
     3841 cagcctactt catgatcgaa agcacttatc tcgctaccgc cgcctcgggc atcaagaccg
     3901 tcgccgaggt cgatcggccg gatgtgcgtg tggtcggcat cgccaacaca acgacgatcc
     3961 gcgccgccgc gcgttcgctg aaaaacacca cgatttccgc cg
//
LOCUS       DATCWM010000492         3143 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_127858, whole genome shotgun sequence.
ACCESSION   DATCWM010000492 DATCWM010000000
VERSION     DATCWM010000492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3143
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127858"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..212)
                     /locus_tag="VIQ50_09620"
     CDS             complement(<1..212)
                     /locus_tag="VIQ50_09620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat-shock protein Hsp20"
                     /protein_id="HEY9360682.1"
                     /translation="MSRVPSLSSPFLLGFDEIERALDRVAKAADGYPPYNIERIARQD
                     GQPERLRITLAVAGFTRDQLDVTVEE"
     gene            450..1373
                     /locus_tag="VIQ50_09625"
     CDS             450..1373
                     /locus_tag="VIQ50_09625"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: protein motif:HMM:TIGR00745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008677 - 2-dehydropantoate 2-reductase
                     activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HEY9360683.1"
                     /translation="MRIAVMGSGGVGGYFGARLVQGGADVHFIARGSHLAAMREGGLA
                     IEGGPSPIHLPKVNATDDPKTIGPVDIVMFCVKLWDTEIAARQLLPLMRPTTGVISFQ
                     NGVQKDDMLRPILGDKALVGGVAYVGTSIGRPGVIAQTGSLQRLVFGEYDNHRSARVE
                     AFHEVCRRGGINAEISDDVRRSIWEKYVSLVAMSGATAGMRKTIGPIRSHPLTRQFLF
                     ELAREVVAVGRAHGVALPEDYAEQRKAFFDSWPPEMTTSMHHDLQQSKPLELRWLSGG
                     VVDLGAAVGVPTPMNRAVRDLLILHADGAPS"
     gene            complement(1388..2365)
                     /locus_tag="VIQ50_09630"
     CDS             complement(1388..2365)
                     /locus_tag="VIQ50_09630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003514143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9360684.1"
                     /translation="MQGKVTLEDHFAIEATLGDSQPFGPHVWPELRHRLLDFHDQRLR
                     LMDASGVEIMVTSLNAPAIQAIADIKQAAEVAHRANDILAAEVAKRPDRFAGVAALPM
                     QEPEIATQELERCIKDLGFKGALVNGYSQTNDAARVLHYDLPQYRSFWRVVESLDVPF
                     YLHPRPPSVRSPLYEGHSWLLGPTWSFAAETSVHALRLIGSGLFDEHARLQIILGHLG
                     EGLPYYLWRIDSRNNWMKAPHKYAARKPVASYFRANFHLTTSGHFSTPALIDAVAEIG
                     VERVMFSVDYPFEDFSDAVDWFDHAEISESDRRKIGRTNAMKLFKLPGA"
     gene            2503..>3143
                     /locus_tag="VIQ50_09635"
     CDS             2503..>3143
                     /locus_tag="VIQ50_09635"
                     /inference="COORDINATES: protein motif:HMM:NF014766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HEY9360685.1"
                     /translation="MKLPPLTVRAIHSVAVEVPITYAFGTSRGVISKAPLLLIDLQTE
                     EGVTGRSYLWCYFPAAMAAVAKMLDEVARTVTGERLAPADLWSKLCGRFALIGVQGVV
                     RMAMAGFDVAAWDALAIAAGWPLATLLGSAPKRIPAYNSCGLGLMAPQRLADEAEKLL
                     AGGFRAVKLRLGYPTLKDDLVALHAVKRRLGSEIAVMVDYNQALSLAQALERGR"
BASE COUNT          560 a          979 c         1030 g          574 t
ORIGIN      
        1 ctttcctcga ccgtcacgtc gagttgatcg cgggtgaagc ccgcaaccgc caaggtaatt
       61 cgcaggcgct cgggttggcc gtcctgtcgg gcaatgcgct cgatattgta gggcggatag
      121 ccgtcggcgg ctttggcgac ccgatcgagc gctcgctcga tctcgtcgaa tccgagcagg
      181 aacgggctgg acagagacgg aactcgggac atgtctcaaa gccctcgtaa gcgactttga
      241 ggggccctat tggcgccccc tgaccgtccg atgaggcatc caccgggcgg tcggttccaa
      301 tatggggagt tgcggcaaac gccgcaagaa cgccgggagg aaggccgcct cggctcgccg
      361 gtccaccctt aaagaagcgc ccctcccgga gattgagccg gtggcagaga cacagtattg
      421 atcgcgcgtt ttgcgctgcg gagggcacgg tgcgaattgc cgtcatgggg tcgggagggg
      481 tcggcggcta cttcggcgca cgactcgtgc aggggggcgc cgatgttcat ttcatcgcgc
      541 gcgggtcgca tcttgccgcc atgcgcgagg gcggcctcgc gatcgaaggc gggccgagtc
      601 cgatccatct gccgaaggtg aacgcgaccg acgacccgaa gacgatcggg ccggtggaca
      661 tcgtgatgtt ctgcgtcaag ttgtgggaca ccgaaattgc cgcgcgccaa ctgctgccgc
      721 tcatgcggcc taccaccggg gtcatctcct ttcaaaacgg cgtgcagaaa gacgacatgt
      781 tgcggccgat cctcggcgac aaggcgctag tgggcggcgt cgcgtatgtc gggaccagca
      841 tcggccggcc gggggttatc gcgcagacgg gctcgctgca gcgattggtg ttcggggagt
      901 acgataacca ccgttccgcg cgtgtcgagg cattccacga ggtctgccgg cgcggcggca
      961 tcaacgccga aatcagcgac gatgtccgtc gctcgatctg ggaaaaatac gtatcgctcg
     1021 tcgcgatgtc cggcgcgact gccggcatgc gcaaaaccat cgggccgatc cgcagccacc
     1081 cgctcacgcg acaattcctg ttcgagctgg cgcgggaggt ggtcgccgtc ggccgcgcgc
     1141 acggcgtcgc cttgcccgag gactacgccg aacagcgcaa ggcgtttttc gattcctggc
     1201 caccggaaat gacgacctcc atgcaccacg atctgcaaca gagcaagccg ctcgagctgc
     1261 gctggctatc gggcggggtg gtcgatctcg gcgccgctgt cggcgtgccg acgcccatga
     1321 accgcgccgt gcgcgatttg ctgatccttc acgccgatgg agcgccgagc tgagaccagc
     1381 ggtgggttta cgcccccggc agtttgaaca gcttcatcgc gttcgtgcgt ccgatcttgc
     1441 gacgatcgct ttcgctgatc tccgcatgat cgaaccaatc gacggcgtcg ctgaaatcct
     1501 cgaacggata atcaacagaa aacatcaccc gctcgacccc gatctcagcc actgcgtcga
     1561 tcagcgcagg cgtgctgaaa tggcccgacg tcgtgagatg gaaattggcg cggaaatagc
     1621 tcgcaactgg cttgcgtgcc gcgtatttat gcggcgcctt catccaattg ttccggctgt
     1681 cgatgcgcca gagatagtag ggcaagccct ccccgaggtg gccgagaatg atctgcagcc
     1741 gcgcatgctc gtcgaacaga ccgctgccga tcagccgcaa agcgtgcacc gacgtttccg
     1801 ctgcgaagct ccaagtcggg ccgagcagcc atgaatggcc ttcatagagc ggcgagcgca
     1861 ccgagggcgg ccgcggatgc agatagaacg gaacgtcaag gctttcgacc acgcgccaga
     1921 acgagcgata ttgcggcaga tcgtagtgca gcacgcgggc cgcgtcgttc gtctgcgaat
     1981 agccgttgac tagcgcacct ttgaatccga gatctttgat gcagcgttcg agctcttgcg
     2041 tcgcgatctc cggttcttgc atcggcaaag cagcgacgcc cgcgaatcga tcgggacgct
     2101 ttgcgacctc cgccgcgagg atatcgttgg cgcggtgagc gacctctgcg gcttgcttga
     2161 tatcggcaat ggcctgaatc gccggcgcat tcagcgacgt aaccatgatc tcgaccccag
     2221 aggcgtccat cagccgcaaa cgctggtcat gaaaatcgag cagccggtgt cgcagctcgg
     2281 gccacacgtg cggtccaaat ggctgcgaat cgccaagcgt ggcttcgatc gcgaagtgat
     2341 cctcgagcgt gacctttccc tgcatgcgtt ctcccgaacc tatggtgacg cgtgagcgcg
     2401 gcgcggacct gacagcgcaa cccactatgc gcgcagtcgc agggtcgtgc cagcccgcag
     2461 gggtattttg cagttgcggc cgaagccgct taagattctg tcatgaagct gccgccgctg
     2521 acggttcgtg cgattcattc ggtcgcggtc gaggtgccga tcacttatgc gttcggcacc
     2581 agtcgaggcg tgatcagcaa ggctccgctg ctgctcatcg atcttcagac cgaggagggg
     2641 gtcaccggcc gctcatatct gtggtgttat tttcccgccg cgatggcggc ggtcgccaaa
     2701 atgctcgacg aggtggcgcg cacggtcaca ggcgagcgtc tcgcgcccgc cgacctctgg
     2761 agcaagcttt gcgggcgctt cgcgctcatc ggcgtgcaag gcgtcgtgcg catggcgatg
     2821 gcgggttttg acgtggcggc ctgggatgcg ctggcgattg ctgccggttg gccgctcgcg
     2881 acgctgcttg gcagcgcgcc aaagcgcatt cctgcctaca actcctgcgg cctcggcctg
     2941 atggcgccgc agcggctggc cgacgaggcg gaaaaactcc tcgccggcgg cttccgtgcg
     3001 gtcaagctca gacttggcta tccgacgctc aaggacgatc tcgttgcgct gcatgcggtg
     3061 aagaggcgcc tcggcagcga gatcgcggtg atggtcgact acaaccaagc gctcagcctg
     3121 gcgcaggccc tcgaacgcgg gcg
//
LOCUS       DATCWM010000493         2813 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_511033, whole genome shotgun sequence.
ACCESSION   DATCWM010000493 DATCWM010000000
VERSION     DATCWM010000493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2813
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_511033"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(83..796)
                     /locus_tag="VIQ50_09640"
     CDS             complement(83..796)
                     /locus_tag="VIQ50_09640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012649879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9360686.1"
                     /translation="MLEVERLKAWYGAAQVLFEPSFHVGHGEVVALMGRNGAGKSTML
                     KALMGLIPQRSGRVRFLGEDISDLKPFQIARRGLGFVPEDRRIFSDLTVTENLDVGRQ
                     PVRHLDGRPAPSWTMEKLFTIFPNLRDMPDRRGAHMSGGEQQMLTVARTLMGNPLLVL
                     LDEPSEGVAPVIVEQMANAIVELKKEGLSVLLSEQNIHFAELVCDRAYVLEKGQLQWH
                     GRMAELATDVAVQRRLLSV"
     gene            complement(811..1578)
                     /locus_tag="VIQ50_09645"
     CDS             complement(811..1578)
                     /locus_tag="VIQ50_09645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009398859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9360687.1"
                     /translation="MNVLRVRNLSKAFGGVHAVENVSFDVGEGEFLALIGPNGAGKST
                     CFNMINGQLAPDRGDIVFADRSIVGLKPREIWRLGVGRTFQVAATFGSMTVAENVQMA
                     LVSHHGEIFRFGAALAARHRGRALELLEQVGMAASAPRACKELAYGDVKRVELAIALA
                     NEPRLLLMDEPTAGMAPRERNELIELVKRLVVERGISVLFTEHSMDVVFAYADRIIVL
                     ARGGLIADGNAAAIRDNTQVQQVYLGAGRTFRPHAEV"
     gene            complement(1575..>2813)
                     /locus_tag="VIQ50_09650"
     CDS             complement(1575..>2813)
                     /locus_tag="VIQ50_09650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9360688.1"
                     /translation="PANLGLDLVVISDAFVVVVVGGMGSIPGAFLAAVIIAEVKALCI
                     GLGLVHFGAFAVNFSKLTLVAEFLVMAVVLIARPFGLLGRPQPPVRNPAEIDDPIRPA
                     ALPLKAAAAALLVLLVLLPLVSRTSPYVLVLSIDVLIAILFATSLHFIMGPGGMHSFG
                     HAAYFGLGAYGAALMVKFAAAATPLALIAAPLAALMGALLFGWFAVRLSGVYLAMLTL
                     AFAQIVWSILFQWEEVTGGSNGILGIWPQAPFDSRPAFYFLTLALVVAGVLLLRRFLF
                     APFGYAMRAGRDSPLRAEAIGINVKRVHWIGFAIAGTFAGIAGGIFAFAKGTISPDVA
                     WVSRSIDAMVMVLLGGIQTLTGPIVGAAVFTVLQDNVMRQTTFWRGLLGAVILLLVLV
                     FPGGIIGALSKRAAARRKPA"
BASE COUNT          559 a          935 c          909 g          410 t
ORIGIN      
        1 cggtcacgcc ccaacggctg cggcagattc tcaagggggc tgagcggtga tcgtgcttga
       61 gaggcctacc agcgtgcgcc catcacactg acagcaggcg gcgttgcacg gcgacatcgg
      121 tggcgagttc cgccatgcgg ccgtgccatt gcagctgtcc tttctccaga acataagcac
      181 gatcgcagac gagctcggcg aaatggatgt tctgctccga cagcaacacc gatagtcctt
      241 ccttcttgag ctcgacgatg gcattggcca tctgctccac gatcaccggc gccacgccct
      301 cggagggctc atcgagcagc accagcagcg gattgcccat caaggtgcga gcgacggtga
      361 gcatctgctg ttcgccgccg ctcatatgcg cgccgcgtcg atcgggcatg tcgcgcagat
      421 tgggaaagat ggtgaagagc ttttccatcg tccacgacgg tgcggggcgc ccgtcgagat
      481 ggcgcaccgg ctggcggcca acgtcgaggt tctccgtgac cgtcaggtcg gaaaagatac
      541 ggcggtcctc cggaacgaag ccgagcccgc ggcgcgcgat ctggaaaggc ttgagatcgg
      601 agatatcctc gcccagaaag cggaccctcc cgctgcgctg cgggattagc cccatcagcg
      661 ccttgagcat cgtcgacttg ccggcgccat tgcgacccat gagcgccacc acctcgccgt
      721 gcccgacgtg gaaggatggc tcgaacagca cttgcgcggc cccataccag gccttgagcc
      781 gctccacctc gagcatgggc gcactcacgg tcacacctcg gcatgggggc ggaaggtgcg
      841 gccggctccg agatagacct gctgcacctg cgtgttgtcg cggatggccg cggcattgcc
      901 gtcggcgatc agccccccgc gcgccaacac gatgatgcgg tcggcatagg caaacaccac
      961 gtccatcgaa tgttcggtga atagcaccga gatcccgcgt tccaccacca gccgcttcac
     1021 caattcgatc agctcgttgc gctcgcgcgg cgccatgcct gccgtcggct cgtccatcaa
     1081 gagcaggcgc ggctcgttgg cgagcgcgat ggcaagctcg acccgcttca cgtccccata
     1141 ggcaagctcc ttgcaggccc gaggggcgga cgcagccatg ccgacctgct cgagcagctc
     1201 gagcgcccgc ccgcgatggc gcgctgcgag cgccgccccg aaccggaaga tctccccatg
     1261 gtgactcacc agcgccatct gcacgttctc agcgaccgtc atcgagccga aggtggccgc
     1321 gacctgaaag gtgcgaccga cgccgaggcg ccatatctcc cgcggtttga gaccgacgat
     1381 gctgcgatcg gcaaatacga tgtcgccgcg atcgggcgcg agctgcccat tgatcatgtt
     1441 gaagcaggtg gatttgcccg cgccgttggg gccgatcagc gccaggaact cgccttcgcc
     1501 gacgtcgaag ctgacgttct cgaccgcgtg cacgccgccg aatgctttgg agaggttgcg
     1561 gacgcggagc acgttcatgc gggttttctc cgcgccgcgg cccgcttgct cagcgcgccg
     1621 atgatgccgc ccgggaacac gagcaccagc aacaggatca ccgcgccgag cagtccgcgc
     1681 cagaacgtgg tctggcgcat gacgttgtcc tgcagcacgg tgaagacggc ggcgccgacg
     1741 atcgggccgg tcagcgtttg aatcccgccc aatagcacca tcaccatggc gtcgatcgag
     1801 cgcgacaccc atgccacgtc gggggagatg gtgcctttcg cgaaggcgaa aatgccgccg
     1861 gcgatgccgg caaacgtgcc cgcgatggca aacccgatcc agtgcacgcg cttgacgttg
     1921 atcccgattg cttccgcacg cagcggcgag tcgcgtcctg cccgcatggc atagccgaac
     1981 ggcgcaaaca ggaaacgacg caagagcaga acgccggcga cgacgagcgc aagcgtcaaa
     2041 aaataaaatg ccgggcggct gtcgaacggt gcctgcggcc agatgccgag aatgccgttc
     2101 gagccgccgg tcacctcttc ccattggaac aggatcgacc acacgatttg cgcgaaggcg
     2161 agtgtcagca tcgcgagata aacgccggag agccgcaccg cgaaccagcc gaatagcagg
     2221 gcgcccatca gcgccgcgag cggcgccgcg atgagggcga gcggcgtcgc cgccgcagca
     2281 aacttcacca ttagcgccgc gccgtaggca ccgaggccga aataggcggc gtggccgaag
     2341 gaatgcatgc ccccggggcc catgatgaaa tgcaacgagg tggcgaacag gatggcgatc
     2401 agcacgtcga tgctcagcac caggacatag ggcgaggtcc tggacacgag cggcagcagc
     2461 accaggagaa cgagcagcgc agctgcggcc gccttgagcg gcaaggccgc gggccggatc
     2521 ggatcgtcga tctcggcggg attgcgcacc gggggctggg gtcgaccgag cagaccaaac
     2581 gggcgcgcga tcagcaccac tgccatcacc aggaattccg ccaccagcgt gagcttggag
     2641 aaattgacgg caaaggcgcc gaaatggacg aggcccagcc cgatgcacag cgccttcact
     2701 tcggcgatga tgacggccgc gagaaaggcg ccggggatcg agcccatccc gccgaccacc
     2761 acgacgacga atgcatcgct gatcaccacc aaatcgagcc cgagattggc ggg
//
LOCUS       DATCWM010000494         2281 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_386951, whole genome shotgun sequence.
ACCESSION   DATCWM010000494 DATCWM010000000
VERSION     DATCWM010000494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2281)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2281)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2281
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_386951"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..631)
                     /locus_tag="VIQ50_09655"
     CDS             complement(<1..631)
                     /locus_tag="VIQ50_09655"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: protein motif:HMM:NF016084.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HEY9360689.1"
                     /translation="MRDKPTIAIAIGDPAGIGPEISLKAARDPAVRSACKPLLVGDAG
                     VLQRQAAACGIAADLHVIARPADAEWSQARLNVFDCAQPDLAELEFGTTGAASGRASL
                     AFARAGIKAALAGEADAVVAAPQNETSIALAGIRFDGYPSFVARETGTDEDDVYLMLC
                     FDAVKIVHATLHRSVRQAIDMITRERIERAIAATDRALRRMGTAAPKIAV"
     gene            complement(688..1809)
                     /locus_tag="VIQ50_09660"
     CDS             complement(688..1809)
                     /locus_tag="VIQ50_09660"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEY9360690.1"
                     /translation="MEVSLVESVLAAVRVGPSKTEIREYPMPDVPDDAALMKMEVAGI
                     CGTDVKLYKTPPIKSPVIMGHENIGIIAKAGREFTRRKGFKEGDLVFVEHYVACGKCE
                     WCHLGQYRHCENTDWRRNPDAIRYGYTSAEKAPHLWGGFAHYVYLPWNAVVHHVPKGV
                     TPELAGLVTPMANGVEWSLFDGGVGYNSRVLIQGPGQQGLSQTVICKQAGAALIIVTG
                     TSKDRARMEVARELGADFTIDVEKEDPLARIMEITGGKGVDVALDCTAGAGTIPILLG
                     VEALKRKGGTIVVQGEMKEFPNFPLEKVTVKFITIKSARGHSFKACELALAQLASKRF
                     PLEKVTTHRFGLKDVDLAIRSVGGEGVPDVIHASLMPWQ"
     gene            1938..2252
                     /locus_tag="VIQ50_09665"
     CDS             1938..2252
                     /locus_tag="VIQ50_09665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360691.1"
                     /translation="MAGSMMLRSFHKRPEYLQALDRVKEWTRVRFKLPQDAAILVTEV
                     ACALPGCPPLETVVAFWTDADTRHHFKVFKPLAEVVADDLPPAWMKTALIAVEGEGLE
                     CC"
BASE COUNT          356 a          754 c          753 g          418 t
ORIGIN      
        1 cgaccgcgat cttcggcgcc gccgttccca tgcgcctgag cgcgcggtcg gtggcggcga
       61 tggcgcgctc aatccgctcg cgcgtgatca tgtcgatcgc ctgccgcacg ctccggtgca
      121 gcgtcgcgtg cacgatcttc acggcgtcga agcatagcat cagatagacg tcgtcctcgt
      181 ccgtgccggt ctcgcgcgcc acgaacgacg gatagccatc aaagcggatg ccggcgagcg
      241 cgatcgaggt ttcgttctgc ggcgccgcga ccaccgcgtc ggcctcgccc gcgagcgccg
      301 ccttgatccc ggcgcgcgcg aaggcaagcg aggcgcggcc gctcgcggcg ccggtggttc
      361 cgaactcgag ctcggcgagg tccggctgcg cgcagtcgaa tacgttgaga cgcgcttgcg
      421 accactcggc gtcggcgggc cgcgcgatca catgcagatc ggccgcgatg ccgcacgccg
      481 cggcctgccg ctgcagcacg ccggcgtcgc cgaccagaag cggcttgcac gcgctgcgca
      541 cggcgggatc gcgcgcggcc ttgagactga tctccggtcc gatgcccgct ggatcgccga
      601 tggcgatggc gatggtcggt ttgtcgcgca tgcgttggac ccccgcctct tatatcgctg
      661 acacggagcg cagctgcgag aggcttttca ttgccagggc atgagcgagg cgtggatcac
      721 gtccggaacg ccctcgccgc cgaccgacct gatggcaaga tccacgtctt tgaggccgaa
      781 cctgtgggtc gtgactttct ccagcgggaa gcgcttcgag gcaagctgcg ccagcgcgag
      841 ctcgcacgcc ttgaagctgt gtccgcgcgc gctcttgatg gtgatgaact tcacggtgac
      901 tttttcgagg gggaaattgg ggaactcctt catctcgccc tggaccacga tggttccccc
      961 ctttcgcttg agcgcttcga cgccgagcag aatcggaatc gtcccggcgc cggcggtgca
     1021 atcgagcgcc acgtcgacac ccttgccgcc ggtgatctcc atgatgcgcg cgagcgggtc
     1081 ttccttctcg acgtcgatgg tgaagtcggc gccgagctcc cgcgcgacct ccatgcgcgc
     1141 gcggtccttg gacgtgccgg tgacgatgat aagcgcggcg cccgcttgct tgcagatcac
     1201 cgtctgcgag agcccctgct ggcccgggcc ttggatgagc acccgggaat tgtagccgac
     1261 gccgccgtca aacaaggacc attcgacccc gttcgccatc ggcgtcacca atcccgcgag
     1321 ctccggcgtg acgcccttgg ggacgtggtg cacgacggcg ttccagggaa ggtaaacgta
     1381 atgggcaaag ccgccccaca ggtgcggagc cttctccgcc gacgtgtagc cgtagcggat
     1441 ggcgtcgggg ttgcggcgcc agtcggtgtt ttcacagtga cgatactggc cgagatggca
     1501 ccactcgcat ttaccgcagg cgacatagtg ctcgacgaag accaggtcgc cttccttgaa
     1561 gcccttgcgc cgggtgaatt cgcgccccgc cttggcgatg atgccgatat tctcgtggcc
     1621 catgatcacc gggcttttga tcggcggggt cttgtagagc ttgacatcgg ttccgcagat
     1681 gccggcgacc tccatcttca tcaaggcagc gtcgtccggg acatccggca tggggtattc
     1741 gcggatctcg gtcttgctcg ggcccaccct gaccgccgcc agcacgctct ccaccagaga
     1801 aacctccatt tgatcgatgc cgcgcgcaat ctaggaccga ccccagagcg gtcaaggtga
     1861 ttttcacgcg ggttgcgctg gcctcgtgcg agtgcttctg atcaagagcg aagcgtgagg
     1921 aaccggggcg gagagcgatg gctgggtcca tgatgctgcg gtcgttccac aagcgtcccg
     1981 aatatctgca ggctctcgac cgggtgaagg agtggacgcg cgtgcgcttc aagcttccgc
     2041 aagatgccgc gatcctggtc accgaggttg cctgcgcgct gcccggctgt cctccgctgg
     2101 agaccgtggt cgcgttctgg accgacgccg acacccggca ccacttcaag gtgttcaagc
     2161 cgctcgcgga ggtcgttgcc gatgaccttc ctcccgcgtg gatgaaaacc gcgctcatcg
     2221 ccgtcgaggg cgagggtctc gaatgctgtt gagaggcatc ccggctcgcg tgcggttgag
     2281 c
//
LOCUS       DATCWM010000495         8531 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_521834, whole genome shotgun sequence.
ACCESSION   DATCWM010000495 DATCWM010000000
VERSION     DATCWM010000495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8531
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_521834"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1133
                     /locus_tag="VIQ50_09670"
     CDS             <1..1133
                     /locus_tag="VIQ50_09670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007693528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="esterase-like activity of phytase family
                     protein"
                     /protein_id="HEY9360692.1"
                     /translation="TAVPVAERQRSVEAALVDTILLTDATGGSLTALDPDGIRRAANG
                     FPDLPQAANGRVSIDSESLAPLQDGSFFIGDEYGPYVYRFSPVGRMLAAIRPPDAFIP
                     IRNGKEDFASNNPGPGAPAPQPPNPESGRQNNQGFEGLTLTPPGGKFLVTGLQSATRQ
                     DGGTSLQTRRYARLLYYDIADLQRPKLVREHVVPLPVFETADGQQQVAAQSELLALDD
                     TFFLILCRDADNGYGAAGATSRYRSIDLLDTSRATNIAGSRYDSTTPVAPGGKLVDGI
                     VPATLTRYIDINDTAELNKFGLHNGEPNDRNNLSEKWEGLALAPALDPANPNDYFLFV
                     SNDNDFITQNGFQAGGAYKDASGADVDTMILVYRVTLPVQLN"
     gene            1197..2162
                     /locus_tag="VIQ50_09675"
     CDS             1197..2162
                     /locus_tag="VIQ50_09675"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009859390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY9360693.1"
                     /translation="MDFGSILLVIVAIAVALFAAYNLFHYILYLLVTHPKNACKIGHL
                     LNEFERRQLVEWAPKADDFLKHDDEHRTYDDVFALYRGEDDNYSTCVFPRAIFSHPYE
                     SDYVLLRPMQQGMRLLDLGCGTGAAADYFASQCNVEIMCVTNSAVQADICRRKFEKFK
                     GRVRVVVSDFDKLELEDEHFDAIYAFESIGYTKNLDAWLERCWRSLKPGGRLLIRSPG
                     SLDACRREHDYRSVTAFFENWRYNFLGANLLVFKLRRLGFDPIRYRQLPFWAWGLTLN
                     FIQHLLLWKFRLRMRTMVDLERIIWRTSKVFVFGNAYNIVLASKP"
     gene            complement(2224..3447)
                     /locus_tag="VIQ50_09680"
     CDS             complement(2224..3447)
                     /locus_tag="VIQ50_09680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEY9360694.1"
                     /translation="MAGTIAAIAACGTFADMRTDLQNFAEIEKGRYLVSAADCIACHT
                     VWPNGARFAGGRPIETPFGNIVSANITPDRETGIGSWSDDQFDDAVRRGVRPNGQRLY
                     PAMPYPYYTRMSREDVLAMRAYLKTVEPVRNPVVTNTLPFPFNIRNAMRVWNVLFFKE
                     ERFKADPQKSDTWNRGAFLVEGPGHCGACHTPKNFLGGDKSGEYLRGFNLQDWFAPDI
                     TNDERTGLGRWSVDEIAEFLKSGHNRVGAAVGPMAEEVMHASSAMTESDLKAIATYLK
                     DQPGRSDKLVPLPENNPQMVAGEAIYRDQCAACHQIDGKGVARLFPSLADSSMARADD
                     PTSLLRLVLRGSRSVATKEEPTAPGMPSFAWQMNDEQIAAVATYVRNRWGNPAPAVSS
                     PEVAKLRSRLATRSD"
     gene            complement(3464..5239)
                     /locus_tag="VIQ50_09685"
     CDS             complement(3464..5239)
                     /locus_tag="VIQ50_09685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEY9360695.1"
                     /translation="MARILPKKDVVIVGLGWTGSIMAHELTDEGLDVIAIERGPWRDA
                     PTDFPPTYAQDELRYRIRHELFLRPDQTTFTFRNKMDQTALPIRNWGAFMPPNGIGGG
                     GVHWNAETWRFLPSDFVLRTHLTQRYGASFLPEDMTIQDYGVTYDELEPYYDAFEYLS
                     GTCGQAGNLRGTSQEGGNPFEGPRSRPYPNPPQKQGYAHVLWAKAARELGYKPFPQPS
                     GNMSQAYVNPLGVRMGPCTYCGFCEWFGCANYSKSSPQTTLLPVLVRKGNFSARDNCE
                     VIKINLDGSQKRATGVTFVDSSGQEWEQRADLVILSAFALFNVQQLLLSKIGKPYDPV
                     ANTGVIGRNYTHQAVSSVDGFFDKAKFNFNPFVASGSIGMCIDEFNGDNFDHGPYGFV
                     GGGYLGHVQTNGRPIETTPVPRGTPSWGAQWKKATADYYLSSIRSASIHGGFYSYRNV
                     YLDLDPTYTDRFGRPLMRMTIDFHENELKAAEFMTDKYAEIVRAMGASIIDKKPRKGP
                     YDITVYQTTHVNGGAIMGSDPKTSALNRYLQSWDVPNLFVLGASAFPQNAGYNPTATV
                     AALALWAAAAIRNQYLKNPGPLVHA"
     gene            complement(5247..5948)
                     /locus_tag="VIQ50_09690"
     CDS             complement(5247..5948)
                     /locus_tag="VIQ50_09690"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HEY9360696.1"
                     /translation="MATAAWLVAGTALSRANEIAGQLPWYPNAGNPPAPVRPGPWQFF
                     TLDEATAVEALADRIIPPDPQMPGGKDAGCAVFVDRQLAGPYGRAEGHYNRPPFMHGA
                     KNQGSQTAGGPAKTYRDGLAALDRYCRAQHGKPFAGLNDDVKDEVLKGLEDEKIKLDG
                     VDGGAFFKEVVDDVKTGFFADPIYGGNRDMVAWKMIGFPGARYNYLDWIDRHNERYPL
                     PAVSMMGRADWTPKR"
     gene            6646..7284
                     /locus_tag="VIQ50_09695"
     CDS             6646..7284
                     /locus_tag="VIQ50_09695"
                     /inference="COORDINATES: protein motif:HMM:NF022763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system-associated protein
                     TagO"
                     /protein_id="HEY9360697.1"
                     /translation="MRTSLIIACAIVAFAAGAQAQDAFTPCRQIKDEGKRLKCYDRLD
                     RSSSGAQERSAQRQGGGDTGWIVNDEKSPLDDSPLVSAALASSDDRSHLLLRCKDRKT
                     EVAVSMTGFIKCGPDVRVTYRLNQEHAVETVWRPHPSCYLALSPAPIPFIRALADGGK
                     VFVRMYDNHDAPYDASFSLGNFSKLRSRLAEACQWDAASTKSAPNAPAERPQ"
     gene            7430..8287
                     /locus_tag="VIQ50_09700"
     CDS             7430..8287
                     /locus_tag="VIQ50_09700"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY9360698.1"
                     /translation="MPITIRRAEAADAAKCGAILYSAFLKVADEHNFPPDFPSVEVAT
                     DVVSMLLAHPGFYGIVAQDDDRIVGSNFADLRSSIAGIGPISIDPQVQDQGIGRKLME
                     AAIDHLASTNVCRIRLVQSAYNNRSLALYTRLGFQTREPLSVLQGPALNIKFAGYDVR
                     PAGEADIATCNHLCRRVHGFERGAELREAISAHTARVVEHLGRVSGYATDLGFFAHAV
                     AETNQDLKSLIAAAPAFQGPGFLLPTRNHEVFAWCLESGLKLVMQMTLMSIGFYNEPA
                     GAWLPSILL"
BASE COUNT         1603 a         2648 c         2601 g         1679 t
ORIGIN      
        1 cgacggccgt gccggtggcc gagcgccaac gcagcgtcga ggcggcgctc gtcgacacca
       61 ttctgctcac cgatgcaacg ggcggatccc tcaccgcact cgaccccgac ggcatccgcc
      121 gcgccgccaa tggatttccg gatttgccgc aggcggcgaa cggccgcgtg agcatcgata
      181 gcgaatccct ggcgccgctg caggacggca gttttttcat tggcgacgaa tatgggcctt
      241 acgtctaccg cttttcgcct gtggggcgca tgctggcggc gatcaggccg cccgacgcct
      301 tcatccccat acgcaacggc aaggaggact tcgcctcgaa caatcccggc cccggcgcgc
      361 cggcgccgca gccgccgaac ccggaaagcg gccggcagaa caaccaaggt ttcgagggac
      421 tgacgttgac gccgccgggc ggcaaattcc tcgtcacggg gctgcagagc gcgacccgcc
      481 aggacggcgg tacctcgctg cagacgcggc gctatgcgcg gctcctctat tacgacatcg
      541 ccgatctgca acggccgaag ctcgtgcgcg agcatgtcgt gccgctgccg gtgttcgaga
      601 ccgccgacgg ccagcagcag gttgccgcgc agagcgagct gctggcgctc gacgatacat
      661 tcttcctcat cctctgccgc gatgccgaca acggctacgg agctgccggc gcgacgtcac
      721 gctaccgcag catcgacctc ctcgacacct cgcgcgccac caacatcgca ggttcgcgct
      781 acgacagcac gacgccggtc gcgcccggcg gcaagctcgt cgacggaatc gtgcccgcca
      841 cactcacgcg ctacatcgat atcaacgaca cggcggaatt gaacaagttc ggattgcata
      901 acggcgagcc gaacgatcgc aacaatcttt cggaaaagtg ggagggattg gcgctggcgc
      961 cggcgctcga cccggccaat cccaacgatt attttctgtt cgtcagcaac gacaacgact
     1021 tcatcacgca aaacggcttt caggccggcg gcgcctacaa ggatgcgagc ggggcggacg
     1081 tcgacaccat gatcctggtc taccgcgtca cgttgccggt gcagctgaac tagtttcctt
     1141 cagaccaccg gccccgggac gcacgctacc gcacggacaa ctaaaaggaa cgaccggtgg
     1201 attttggttc gatattgctg gtgatagtag cgatcgcagt cgcattgttc gcggcataca
     1261 atctctttca ttacatcctt tatctcctcg tcacgcatcc gaagaatgca tgcaaaatcg
     1321 gccatttgtt gaacgagttt gagcgccgtc aacttgtcga gtgggccccc aaggccgacg
     1381 attttctcaa gcacgatgac gaacatcgca catacgacga tgtgttcgcc ctctatcgcg
     1441 gcgaagacga caattacagc acgtgcgtat tcccgcgcgc gatcttctcg catccgtatg
     1501 aatccgacta tgttctgctc aggccgatgc agcagggaat gcgcctcttg gacctcggat
     1561 gcgggaccgg tgctgcggct gattactttg cgagccaatg caacgtggag atcatgtgcg
     1621 tcacgaattc cgccgttcaa gcggacatct gccggcgcaa gttcgagaaa ttcaagggcc
     1681 gcgtacgcgt cgtcgtttcc gatttcgaca agctcgagct cgaagatgag catttcgacg
     1741 cgatctacgc tttcgaatcg atcggataca ccaagaactt ggatgcctgg ttggagcgat
     1801 gctggcgatc actcaagccg ggagggcggc tgctcattcg ttcgcccgga tcgctggatg
     1861 cctgtcgtcg agagcatgat tatcgcagcg tcaccgcgtt tttcgaaaat tggcgttaca
     1921 actttcttgg cgccaatctg ctcgtcttca agctgcgccg tctgggcttc gatcccatcc
     1981 gctaccgcca attgccgttc tgggcgtggg gcctcacctt gaacttcatt cagcacctgt
     2041 tgctgtggaa gtttcgactg cgcatgcgca ccatggtaga cctggagcgg atcatttggc
     2101 gcacatccaa ggtgttcgtg ttcggcaatg cgtacaacat cgtgcttgcc agcaagccat
     2161 agctcgcggc gtgacccgct gagtgacctc aacagcccgt tgttccaccc aagctgtaag
     2221 ttttcagtcc gagcgggtcg ccagcctgga gcgtagtttc gcgacctcgg gggaagacac
     2281 tgcgggcgca gggttacccc agcggttgcg cacgtaagtc gcgaccgccg cgatctgctc
     2341 gtcattcatc tgccaggcga acgacggcat gccgggcgcg gtcggctcct ccttggtggc
     2401 aacgctgcgg ctgccgcgca gcaccaggcg cagcagcgac gtcggatcgt ccgcgcgcgc
     2461 catcgacgag tcggccaacg agggaaagag ccgcgccacg cctttgccgt cgatctggtg
     2521 gcacgccgcg cattgatcgc gatagatggc ctcgcctgcg accatctgcg gattgttttc
     2581 gggcagcggc accagcttgt ccgaacgacc gggctgatct ttgagataag tcgcgatcgc
     2641 cttgaggtcg ctctcggtca tcgccgatga ggcatgcatc acctcttcgg ccatcggacc
     2701 aacggcggct ccgacccggt tgtggcccga tttgagaaat tcggcgatct cgtcgaccga
     2761 ccagcggccc aagccggtgc gctcatcgtt ggtgatgtcc ggggcgaacc agtcctgaag
     2821 gttaaatcca cgcagatatt cgccggactt gtccccgccc aggaaattct tcggcgtgtg
     2881 gcaggcgccg cagtggccgg gaccctcaac gagaaaggca ccgcgattcc atgtatccga
     2941 tttctgcgga tcggctttga atcgttcctc cttgaagaaa agcacgttcc acacgcgcat
     3001 ggcgttgcgg atattgaagg ggaagggcag cgtgttggtc acgacggggt tgcgcacggg
     3061 ttcgacggtc ttgagatagg cccgcatggc gagcacgtcc tcgcgcgaca tcctggtgta
     3121 gtacgggtag ggcatggccg gatacagtcg ctggccgttc ggacggacgc cgcgcctgac
     3181 cgcgtcgtcg aattgatcgt cgctccagga cccgatgccg gtttctcgat ccggcgtgat
     3241 gttggcggag acgatgttgc cgaacggcgt ctcgatcggc cgcccgccgg caaaacgcgc
     3301 tccgttcggc caaacagtat gacaggcgat gcaatccgcc gccgaaacga gatatcggcc
     3361 cttctcgatt tcggcgaagt tttgcaggtc cgtgcgcatg tccgcgaatg tgccgcaggc
     3421 cgcgatcgcc gcgatcgtgc ccgccatcag tgcggccgct cgcctaagca tggaccagcg
     3481 gccccgggtt tttgaggtac tgattgcgga tcgccgccgc cgcccacaac gccagcgcag
     3541 cgacggtggc ggtcggattg tagccggcat tttgcgggaa cgcgctggcg ccgagcacga
     3601 atagattcgg tacgtcccag ctttgcagat aacgatttag cgcgctggtt ttgggatcgc
     3661 tccccataat cgcgccgccg ttgacatgcg tcgtctggta cacggtgatg tcgtaggggc
     3721 cttttcgggg ttttttgtcg atgatgctgg cgcccattgc tctgacgatc tcggcatatt
     3781 tatcggtcat gaattcggcc gccttgagtt cgttctcatg aaaatcgatt gtcatgcgca
     3841 tgagcgggcg cccgaagcga tcggtatagg tcggatcgag atcgagatag acgttgcgat
     3901 agctgtagaa gccgccgtgg atgctcgctg atctgatgct gctgaggtaa tagtcggcgg
     3961 tcgccttttt ccattgtgcg ccccaactcg gagtgcccct cggcaccggc gtcgtctcga
     4021 tcgggcggcc gttggtctgc acatggccga gatagccgcc gccgacgaag ccatacggtc
     4081 catgatcgaa attgtcgccg ttgaattcat cgatgcacat cccgatcgag ccggaggcga
     4141 cgaacggatt gaaattgaat ttcgccttgt cgaagaagcc gtccacgctg gacaccgcct
     4201 gatgggtgta gttgcggccg atgaccccgg tattggcgac cgggtcatag ggtttgccga
     4261 ttttcgacag cagcagctgc tgcacgttga agagcgcgaa cgccgacaag atcacgagat
     4321 cggcgcgctg ttcccattcc tgtccggacg agtcgacgaa ggtcacgccg gtggcgcgtt
     4381 tttgcgagcc atcgagattg atcttgataa cctcgcaatt gtctcgggcg ctgaagtttc
     4441 ctttgcgcac gagcaccggc aatagggtcg tttgcgggct ggacttggaa tagttcgcac
     4501 agccgaacca ctcgcagaag ccgcaatagg tgcacggccc catgcgaacg ccgagcggat
     4561 tgacgtaagc ctgcgacatg ttcccggacg gttgcgggaa tggtttgtag ccgagctcgc
     4621 gcgctgcttt cgcccagagc acgtgcgcgt agccctgctt ctgcggcgga ttgggatacg
     4681 gacgagagcg tggaccttcg aacggattgc cgccctcctg gctcgtcccg cgcagattgc
     4741 cggcctgccc gcatgtgccg ctgagatatt cgaacgcgtc gtagtagggc tcgagttcgt
     4801 cgtaggtgac gccataatcc tgaatcgtca tgtcttccgg caagaacgag gcgccgtaac
     4861 gctgcgtgag gtgcgtgcgc aagacgaaat cgctcggcag gaagcgccaa gtctccgcgt
     4921 tccaatgcac gccgccgccg ccaatgccgt tcggcggcat gaaggcgccc cagttgcgga
     4981 tcgggagcgc ggtttgatcc atcttgttgc ggaaggtaaa cgtggtctgg tctggccgca
     5041 gaaacagctc gtggcggatc cggtagcgca attcgtcctg ggcataggtc ggcggaaagt
     5101 cggtgggtgc atcgcgccat ggtcctcgct cgatggcgat gacgtcgagc ccctcatcgg
     5161 tcagctcgtg cgccatgatc gagcccgtcc aaccgagccc gacgatcacg acgtccttct
     5221 tcggcaggat gcgggccatg cgcgcgtcac cttttcggcg tccaatccgc gcgacccatc
     5281 atgctcacgg ccggcagcgg atagcgctcg ttgtggcggt cgatccagtc caaatagttg
     5341 taacgggcgc cgggaaaccc gatcatcttc cacgcaacca tgtcgcggtt gccaccatag
     5401 atggggtcgg cgaagaagcc cgttttgacg tcgtcgacga cctctttgaa gaacgctccg
     5461 ccgtcgacgc catcgagctt gatcttttcg tcttcgaggc ctttgagcac ctcgtccttg
     5521 acgtcgtcgt ttagacccgc gaagggcttg ccgtgctgcg cgcggcagta ccggtcgagt
     5581 gccgccagcc catcgcgata agttttggct ggaccacccg ccgtctgcga cccctgattt
     5641 tttgcgccat gcatgaaggg cggccggttg taatgacctt ccgctctgcc gtaggggccg
     5701 gcaagctgcc ggtcgacaaa gacggcgcag ccggcatcct ttccgccggg catctgcgga
     5761 tctggcggga tgatgcgatc cgccaacgct tcgaccgccg tcgcctcgtc gagggtgaaa
     5821 aactgccaag gccccggccg taccggtgcg ggcgggttgc cggcgtttgg ataccagggg
     5881 agctgtccgg cgatttcatt ggcgcgcgac aatgcggtgc ccgcaaccaa ccaggccgca
     5941 gtggccaata attgtctccg atgcatgcgc attgcccgac aaccggcgcc gtgggtggag
     6001 aactaaccct gcagatcgaa gattatgcgc tttattccgc attccgccac atggcgagcg
     6061 cgatgcgaac gtggaatgtt cagccaggat ggtccctcca gcgcggaggt gcttgatacg
     6121 gattgtcgct tcttgtgggg aattgcgctt gccgccttgt gccttcgaaa acaaaaacgc
     6181 ggctgggttc aagctgtctc accagtgcgg gacggttcga ttgtagccga ggctgccacc
     6241 gccggtggct tctggactat tcgggtcgga aaacggaaga gtgctcgaac cggcctcgcg
     6301 gcgaaccggg ccgcgacttt gcggaggata gggctgcggc gcatacgatc gcgcagggcc
     6361 atagcggcga tacgactggg cgttcgccat ttccacccca agggtcacgg ccaaaacgcc
     6421 catgcctgcg agaacgccta gagcgcgtcg catttttcga tctccctttg cacaacgagc
     6481 gctggagcaa cgcccgtacg aggcgaacgt ttcaaatccg gcgcgccgac aacgcttagt
     6541 ggggcggtga tgggtcgacg cacaaccgga catcgctcca gctacgatag ccccccgacc
     6601 gtccgctccc ttgcatgccg agacccgatc ggctctcatg ggcggatgcg caccagtctg
     6661 atcatcgctt gcgccattgt cgccttcgcc gcgggagcgc aggcgcagga cgcgttcacg
     6721 ccctgccgtc agatcaagga cgagggcaag cggctcaaat gctacgaccg cctcgatcga
     6781 tcctcctcgg gcgcgcagga gaggagcgcc cagcgccaag gaggcggcga tacggggtgg
     6841 atcgtcaacg atgaaaaatc cccgctcgac gacagcccgc tggtctcggc ggcgctcgcg
     6901 tcgagcgacg accggtcgca tctgctgctg cgttgcaagg accgcaagac cgaggtcgcg
     6961 gtcagcatga cgggattcat caaatgcgga cccgatgtgc gcgtcaccta tcgactgaac
     7021 caagagcacg cggtggagac ggtctggcgt ccccatccga gctgctatct cgcgctctcc
     7081 cctgctccca tccccttcat tcgcgcgctt gcggacggcg gcaaggtctt cgtgcgcatg
     7141 tacgataacc acgacgcgcc gtacgacgca tcgttcagcc tcggcaactt ttcgaagctc
     7201 cgttcgcgcc tggcggaagc ctgccaatgg gatgctgcct ctaccaagtc cgcgccgaac
     7261 gcgcccgcgg aacggccgca atagtgtgcc actgagcggc cttttccatc caagcactcg
     7321 cttgggggat aatcccactg actcgaccaa ccgcgacgcc tcccgtgcgc gcagcgccgc
     7381 tgccgcgtgc tggaggacga acggaagccg gcaaacgaga cgaaacacga tgccgattac
     7441 gatccgacgg gccgaagccg ccgatgccgc caaatgcggg gcaattcttt actccgcctt
     7501 cctgaaagtg gcggatgagc acaactttcc gcctgacttt ccatcggtcg aagtggcaac
     7561 cgatgtagta tcgatgctgc tcgcacatcc cggtttctac ggcatcgtcg cacaagacga
     7621 cgatcgaatc gtcggcagca atttcgcgga cctgcgttcg tcgattgccg gcatcgggcc
     7681 gatctcgatc gatccgcagg tgcaggacca aggcatcggt cgcaaactca tggaagccgc
     7741 gatcgatcac ttggcgtcca ccaatgtttg ccggatcaga ctggttcaat cggcttacaa
     7801 taatcgctcg cttgcccttt acacgcggct cggcttccag acgcgggagc cattgtcggt
     7861 tcttcaagga ccggctctca acatcaagtt cgccggatac gatgtgaggc cggctggcga
     7921 ggcagacatc gccacatgca atcacctatg ccgccgagtg catggcttcg agcgcggcgc
     7981 agagttgcgc gaagcgatca gcgcgcacac cgcacgtgtc gtcgagcacc tgggacgcgt
     8041 cagcggatat gcgaccgacc tgggtttctt tgcccatgcc gtcgccgaga caaatcagga
     8101 cttgaaatcg ctgattgccg cagcgccggc gtttcaagga ccgggatttc tgctcccgac
     8161 cagaaatcac gaggttttcg cctggtgcct cgagagcgga ctcaagctcg tcatgcagat
     8221 gacattgatg agtatcgggt tttacaacga accggcgggt gcgtggctac cctcgatcct
     8281 attgtgacaa cgcatagcct cgcttttgcc gcaacaggtt gcagagattt ggctaacaaa
     8341 agcgaattag gtcatttcat cgcgctatca tcgttgctca ttcctgccga cccgcgacgc
     8401 gcctgggacc gcgcctacga cagtcctgcc atacgcaaaa aaatggcgca ttgcgacccg
     8461 ttgccagtgg cgggtgccgg tagggagtgc ttatctatag gagcatgagc acgccattat
     8521 ccagaaccgc g
//
LOCUS       DATCWM010000496         2863 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_537862, whole genome shotgun sequence.
ACCESSION   DATCWM010000496 DATCWM010000000
VERSION     DATCWM010000496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2863)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2863)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2863
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_537862"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..361)
                     /locus_tag="VIQ50_09705"
     CDS             complement(<1..361)
                     /locus_tag="VIQ50_09705"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY9360699.1"
                     /translation="MTPLLEDVLKRRPYNAATEFVDANVARGLGDKVAFTDSTRSLTY
                     AQLQERSYRFAAALKSLGLHEENRVVLVFHDTVDYPVAFWGAIRAGIVPVPVNTLLTA
                     EQYAYLFADSRAAAIVTA"
     gene            complement(587..1468)
                     /locus_tag="VIQ50_09710"
     CDS             complement(587..1468)
                     /locus_tag="VIQ50_09710"
                     /inference="COORDINATES: protein motif:HMM:NF024859.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY9360700.1"
                     /translation="MTDRQLPILDEIFLDHVGHFVGDPQAASRALARAGFAPTPVSVQ
                     VVPDPKDAPRPTGTGNVTAMFSRGYIEVLFKTADTVLGRELEAALARHAGVHLAAFAV
                     ADAAAAHRRLASAGFRMQPLVHMQRPVETGDAAGIAAFTLARLEAGQMPEGRIQVLTH
                     RTEAMVWQPRWLSHPNGAVALTDVIIAARDLEDATRRFARFTGRKAIPSPSGEIIELD
                     RGRVQLMSAEAFARKLPDVPIPSLPFVGAYGIRVASLKVTGDMLERNGLRTRRNDHGL
                     VVTFPEELGRGAWLFAE"
     gene            complement(1489..>2863)
                     /locus_tag="VIQ50_09715"
     CDS             complement(1489..>2863)
                     /locus_tag="VIQ50_09715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012329555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HEY9360701.1"
                     /translation="VASALCARGLGRGDRVAVLSANCAEFLGAYYGIMRAGLVAVPVS
                     FKFPRATIHFILRDAAAKLVFCDSSRAQDCPPDIPSVRFGDEGVNGFDRFLDAGPFDA
                     VVPRAREPAMFLYTSGSTGMPKGVVLSHQAHIWVVQARLTQELARHRYLVAAPLYHMN
                     ALALAKLACAAYATIVLLPQFTALAYIEAIGRHRCTWLTAVPPMIAMMLREREALART
                     DLSSVEFIRMGSAPVSQSLMEAIRHALPKVSVTNAYGTTEGGPVVFGAHPKGLPQPDM
                     SVGYPHPQVELRLVDGDNRHAPQGVLEIKCPALMNGYHNRPDVRPPFTADGFYVTGDV
                     FRRDGDGFHYFVGRGDDMFVSGGENVYPSDVERMLERHPDVAQAAVVPIDDEIKGQKP
                     VAFVVSKPGRSPSADEIKRFALANAPAYAHPRFVWFVDELPLAATNKVDRALLHGLAQ
                     ERLAAGH"
BASE COUNT          537 a          905 c          962 g          459 t
ORIGIN      
        1 cggcggtcac gatcgccgcc gcgcggctgt cggcgaaaag atatgcgtat tgctcggcgg
       61 tgagcagcgt attgacgggc acgggcacga tgccggcgcg tatcgcgccc cagaacgcga
      121 ccggataatc gacggtgtcg tgaaacacga ggaccacgcg gttctcctcg tgcagcccga
      181 gagacttcaa cgccgccgcg aagcgatacg acctttcctg cagctgggca taggtcagcg
      241 agcgcgtgga atccgtgaac gccaccttgt cgccgagacc gcgcgctacg ttggcgtcga
      301 cgaactcggt ggcggcgttg tacggccggc gtttcaacac gtcttcaagc aagggcgtca
      361 tgacggcagg ctgacaatcg aacatcacgg cagctgtcga gcagtcggac tgcccctcag
      421 tcgatctgtt cccactgagg ggaggggagc acgccaccga ctcgtagcga gcaaacgcat
      481 acaaatgtgt ccagtttggg caggactata gtgccggcac ggcattccgt cctggaacaa
      541 tatcggcaga cggtgcgcaa tcggcgtcat ttgttcgggt caatgctcat tccgcgaaca
      601 accatgcgcc gcgcccgagc tcctccggaa aggtcacaac caaaccatga tcgttgcgcc
      661 gcgttcgcag cccgttgcgc tcgagcatgt cgccggtcac tttcagcgag gccactctga
      721 tcccataggc gccgacaaac ggtagggagg gaatggggac atccggcagt tttcgggcaa
      781 atgcctcggc gctcatgagc tgcacgcggc cgcgatcgag ctcgatgatc tcgcctgagg
      841 gcgaaggtat ggccttgcgg ccagtgaagc gcgcaaagcg ccgcgtggca tcctcgaggt
      901 cgcgagccgc aatgatgaca tcggtgagcg ccactgcgcc gttggggtgg gagagccagc
      961 gcggttgcca gaccatggcc tcggtacggt gggtaagaac ttggatgcgc ccttccggca
     1021 tttgccctgc ctcgagccgc gccagcgtga aggcggcaat tccggccgcg tcgccggtct
     1081 cgaccggtcg ctgcatgtgg accaaaggct gcatgcgaaa tcccgccgag gcgagccggc
     1141 gatgcgccgc cgccgcatcc gccacggcga aggcggcaag atgcacgccg gcatggcgtg
     1201 cgagcgccgc ctcgagctcg cgtccgagca cggtgtcggc ggtcttgaac agcacttcga
     1261 tgtaaccgcg cgagaacatc gccgtcacgt tgcccgtgcc ggtcggccgc ggcgcgtcct
     1321 tcggatcggg gacgacttga acggaaaccg gcgtcggagc aaatccggcg cgcgcgagcg
     1381 cgcggcttgc ggcttgcgga tcgcccacga aatggccgac gtggtcgagg aagatctcgt
     1441 cgagaatggg aagctgacgg tcggtcacag atctcctctc aaatgcagtc aatggccggc
     1501 ggcgaggcgc tcctgcgcga ggccgtgcag cagcgcccga tcgaccttgt tggtcgctgc
     1561 cagcggcaat tcgtccacga accagacaaa gcgtggatgc gcgtaggccg gcgcgttggc
     1621 gagggcgaag cgcttgatct cgtccgcgct cgggctgcgc ccgggcttcg acaccacgaa
     1681 ggcgacgggc ttttgcccct tgatttcgtc gtcgatcggc acgaccgcgg cctgggcgac
     1741 atcgggatgc cgctccagca tgcgctcgac gtcgctcgga tagacgttct cgccgcccga
     1801 cacgaacatg tcatcgccgc ggccgacgaa ataatggaag ccgtcgccgt cgcgccggaa
     1861 gacgtcgcca gtgacgtaga atccgtcggc ggtgaacggc ggcctgacat caggccggtt
     1921 gtgatagccg ttcatgagcg ccgggcattt gatttcaagc acgccttgag gcgcgtgccg
     1981 gttgtcaccg tcaaccagcc gcagttcgac ttgcggatgc ggatagccga cggacatatc
     2041 cggctgcggc agacctttgg ggtgcgctcc gaacaccacc gggccgccct cggtggtgcc
     2101 gtaggcgttg gtgaccgaga ccttcggcaa agcgtggcgg atcgcttcca tcaagctttg
     2161 actgaccggc gccgaaccca tgcggatgaa ctcgacgctc gagagatcgg tgcgggcgag
     2221 cgcctccctc tcgcgcagca tcatggcgat catcggcggc accgcggtga gccaggtaca
     2281 gcgatggcgt ccgatcgcct cgatataggc cagagcggtg aattgcggca gcagcacgat
     2341 ggtcgcatac gcggcgcagg cgagcttggc gagggccagc gcgttcatgt gatagagcgg
     2401 cgcagcgacg agataacggt gtcgcgcaag ctcctgcgtc agccgcgcct gcaccaccca
     2461 gatgtgggcc tggtgcgaca gcacgacgcc cttcggcatt cccgtcgagc ccgacgtgta
     2521 gagaaacatc gcgggctcgc gcgcacgcgg cacgacggcg tcgaatggtc cagcgtcgag
     2581 gaaccgatcg aaaccgttta cgccttcatc gccaaaacgc accgagggaa tatccggcgg
     2641 gcaatcttgc gcgcgcgagc tatcgcagaa gacgagcttt gccgcggcgt cgcgcaggat
     2701 gaaatgaatg gtcgcgcgcg gaaacttgaa gctcaccggc acggcgacga ggcccgcccg
     2761 catgatgccg taataagctc caagaaattc ggcgcaattg gcggagagaa cggccacgcg
     2821 atctccgcgc ccgagcccgc gcgcgcaaag cgcgctggcg acg
//
LOCUS       DATCWM010000497         2916 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_14281, whole genome shotgun sequence.
ACCESSION   DATCWM010000497 DATCWM010000000
VERSION     DATCWM010000497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2916)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2916)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2916
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14281"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..344)
                     /locus_tag="VIQ50_09720"
     CDS             complement(<1..344)
                     /locus_tag="VIQ50_09720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360702.1"
                     /translation="MRIADQPMSAPMQRAARTRPLLLTFIAAVVLSASLLFMVQPMFT
                     KLVLPGFGGAPSVWSVAIVFFQTALLAGYAYAHWLTRYAPGRPSVAIHLVVMGVAMFA
                     LPLSIATGWERPP"
     gene            504..1505
                     /locus_tag="VIQ50_09725"
     CDS             504..1505
                     /locus_tag="VIQ50_09725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY9360703.1"
                     /translation="MIDLTRRTLLTGTVASTAVAGIFLAPGDQARAAAPPAGTQAPGW
                     YRYKVGNFEVTVVADGVNRFKLPDDIVANVKREEVNAALVAAHGEPDVFVTPYNPIVV
                     NTGQKLVVIDTGLGEAAFNASKGRIGQFLTNLAAAGIDPNTVDTVVISHYHGDHVNGL
                     LKADNSLAFPNAEILVPAAEHKFWMDDGEMSRAPKGRIEELFRNNRRIFAGEVMKRLR
                     TYDEGKEVVPGITAVATHGHSMGHNSHIVASGSSQVYVQADVTHVPFLFARNPGWHAF
                     YDQDPVMAEATRRKVYDMLVAEKMLVQGFHYPFPSLACVEKSGSGYHEAPVAWNPTL"
     gene            1836..2903
                     /gene="argC"
                     /locus_tag="VIQ50_09730"
     CDS             1836..2903
                     /gene="argC"
                     /locus_tag="VIQ50_09730"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018697744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HEY9360704.1"
                     /translation="MPKAVEKTAKIGVLGASGYTGAELLWLLIRHPGIEIALLTAERR
                     AGQHMRQVFPQFSPYALPKLLAIDAVDWKAQALDLAFCALPHATTQTVIKDLLAAAPT
                     TKVVDLSADFRLADTAAYARWYGHEHHAPELQKEAVYGLTEIYREKIKAARLVANPGC
                     YTTCAELPLIPLLRTKAIDPDAIVIDAKSGMTGAGRGAKEEMLFSEVAEGFHAYGVGH
                     HRHMAELDQEFARAAGREVVVSFTPHLLPINRGIFSTIYVRGLKTSPDGMHAILARAY
                     AGEPFVHLLPFGEMPQTRHVCGSNMIFIGVTKDRVADRAIICAALDNLAKGASGQAVQ
                     NMNLMLGFPETLGLEQVALFP"
BASE COUNT          534 a          949 c          936 g          497 t
ORIGIN      
        1 ggcgggcgct cccagccggt ggcgatcgag agcggcagcg cgaacatagc cacgcccatg
       61 accacgagat ggatggcaac cgagggccgg ccgggcgcgt agcgtgtgag ccaatgggcg
      121 taggcgtagc ccgcgagcag cgctgtttgg aagaatacga tggccaccga ccacaccgac
      181 ggcgcaccgc caaagcctgg cagcaccagt ttggtgaaca tcggctgcac catgaacaac
      241 agcgaggcgc tgagcacgac ggccgcgatg aatgtgagca gcaaggggcg cgtgcgcgcc
      301 gcgcgctgca tcggtgcgct catcggctga tcggcgatcc gcatgaccta gccttatctg
      361 gtcgcctcgc tgggtggaat agcggcgctt ggctgtctcc cctcgcgccg tcaggaccta
      421 ggcgcgacca gcccccatga tgtaccattc gcggcaacgc ttcgcagaaa gcccgctcga
      481 gagactgtcc aggaggagac gtcatgatcg atctcacgcg ccgaacgctg ctgaccggta
      541 ccgttgcgag cacggctgtc gcgggcattt tccttgcccc gggcgatcag gcgcgcgcgg
      601 cggcgccgcc tgcgggcacg caagcgccgg gctggtaccg ctacaaggtc ggcaacttcg
      661 aggtcaccgt ggtggcggat ggcgtgaacc gtttcaagtt gccggacgac attgtcgcca
      721 atgtcaagcg tgaggaagtc aatgccgcgc tcgtggcggc gcacggggag ccggacgttt
      781 tcgttacccc gtataatccg atcgtggtca acaccggaca aaagctcgtc gtcatcgata
      841 ccggtctggg cgaagcggcg ttcaatgcga gcaaggggcg gatcggtcaa ttcctgacca
      901 atctggccgc cgccggcatc gatcccaata cggtcgatac cgtcgtcatc tcgcactacc
      961 acggcgatca cgtgaacggt ctgttgaaag cagacaattc gctcgccttt ccaaatgccg
     1021 agatcctggt gccggcggcg gaacacaagt tctggatgga tgacggcgag atgagccgtg
     1081 cccccaaagg ccgcatcgag gagctgttca ggaacaaccg ccgcatcttt gccggcgagg
     1141 tgatgaagcg gctgcggacc tatgacgaag gcaaggaggt cgttcctggc atcaccgccg
     1201 tcgccaccca cgggcatagc atggggcaca actcgcatat cgtggcgtct ggatcgagcc
     1261 aggtctacgt ccaagccgac gtcacgcacg tgccgttcct gttcgcgcgc aaccccggct
     1321 ggcacgcctt ctatgatcaa gaccccgtga tggcggaggc aacgcgccgc aaagtctacg
     1381 acatgctggt cgcggaaaag atgctggtcc agggcttcca ctatcctttc ccctcgcttg
     1441 cttgcgtcga aaagagtgga tcgggctatc acgaggcgcc tgtggcgtgg aatcccacgc
     1501 tctgagtgga tgtcgatgac ggagcaggac gcagcgctcg gagcctggcg cattgctgcg
     1561 ggtgacgagc gcgccgaatg cttgacgcag aacggcatgg cgtctatagc gccggccatg
     1621 acgatgatcg cccgccggat ttttttccgc cgtcgccgcg tggagcggcc aaggtcgcgc
     1681 aggctgcgtg gagtggcctg cgccgcggca cgggcgcgcg atcgcgcgtg atcgtccctc
     1741 gtgccgccgg atgaggatcc gcggcaccgt cctgatttcc tccgccgcat cctcgtcgtc
     1801 cgggcgtcgc attcgactgc gagaaggaat ggcccatgcc caaagcggtt gagaaaacag
     1861 ccaagatcgg cgtactcggc gcgtccggct acaccggtgc ggagctgctg tggcttctga
     1921 tccgtcaccc cggcatcgag atcgcgctgc ttaccgcaga gcgccgcgcc ggccagcaca
     1981 tgcgccaagt gttcccgcaa ttctcgccct atgcgctgcc caagctgctg gcgatcgatg
     2041 ccgtcgactg gaaggcgcaa gcgctcgatc tcgccttctg tgccctgccg cacgcgacca
     2101 cgcagaccgt gatcaaggac ttgctcgccg cggcgccgac caccaaggtg gtcgatctct
     2161 ccgcggattt ccgcctcgcc gacaccgccg cctatgcgcg ctggtatggc cacgagcacc
     2221 atgcgccgga actgcaaaag gaggcggtct atggcctgac ggaaatctac cgcgagaaga
     2281 tcaaggccgc gcgccttgtc gccaatcccg gctgctacac cacctgcgcg gagctccccc
     2341 tcattccgct tctgcgcacg aaggcgatcg accccgacgc catcgtgatc gatgccaaat
     2401 cgggcatgac cggcgcgggc aggggagcga aggaggaaat gctgttctcg gaggtggcgg
     2461 aaggcttcca cgcctacggc gtcggtcatc accgtcacat ggccgagctc gaccaggaat
     2521 tcgccagggc cgccgggcgc gaggtcgtcg tcagcttcac gccgcacctg cttccgatca
     2581 accgcggaat tttctcgacc atctatgtgc gcgggctcaa aacctcgccc gacgggatgc
     2641 atgcgatcct ggcgagagct tacgccggag agccgttcgt gcacctgctc ccgttcggcg
     2701 agatgccgca gacccgccac gtgtgcggct ccaacatgat cttcatcggc gtaaccaagg
     2761 accgcgtcgc ggatcgcgcc atcatctgcg cggcgctcga caatcttgcc aagggtgcct
     2821 ccggccaggc ggtgcagaac atgaacctga tgctcggctt tcccgagacg ctcgggcttg
     2881 agcaggtggc gctgtttccg tgacgagcaa ttggtc
//
LOCUS       DATCWM010000498         2817 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_289822, whole genome shotgun sequence.
ACCESSION   DATCWM010000498 DATCWM010000000
VERSION     DATCWM010000498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2817)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2817)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2817
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_289822"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..655
                     /locus_tag="VIQ50_09735"
     CDS             <1..655
                     /locus_tag="VIQ50_09735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018259567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HEY9360705.1"
                     /translation="RRGLTAFLFHRHQPGFEIVRRIPIMGPEEHGGHCELVFEGLEVP
                     DENVLMEVGDGLRVTQIRLGPARLTHCMRWLGLAKRSMEIAQAYVAQREGFGMRLADR
                     ESVQIKLGEIAHQIQIGRLLVMHAAWKLDQGDHARKEVSMAKLHVADTLHRAADVAIQ
                     LNGARGYSKDTILEWIYRYARQARLVDGASEVHNMVLARFMREEGRDFWRWSAGNRV"
     gene            966..1808
                     /locus_tag="VIQ50_09740"
     CDS             966..1808
                     /locus_tag="VIQ50_09740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016839681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HEY9360706.1"
                     /translation="MQIRIGFEVVYEFVARTPMVLMLNVHPSRAADIIEPDELRTTPT
                     LPLTRYLDQFGNVCTRLVAPAGELTISTDALIADSGLPDAVELAARQHEIAELPHDTL
                     AFLLGSRYCETERLMEEAWSRFGNTLPGWPRVQAICDFVHSHVGFGYQHARATKTAAD
                     VMVERRGVCRDFAHLAITLCRCMNIPARYCTGYLGDINVPPEPEPMDFSAWFEVYLGG
                     RWHAFDARHNVPRIGRIVMARGRDAADVAFSTTFGQNVLKRFIVRTDEAEPSGIDLVE
                     RLVA"
     gene            complement(1821..2201)
                     /locus_tag="VIQ50_09745"
     CDS             complement(1821..2201)
                     /locus_tag="VIQ50_09745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360707.1"
                     /translation="MARERHDPLWFEFTLILIGAGFGPVPSLTAVAMQNVVPRHQFGI
                     SVGTMNFSRNLFATMLIAIFGAIVLAGTPAGQSLGSAFAAADPAEAFGQLFLVAAASM
                     SIALIAILLMEEKPLQTGTELDAR"
     gene            complement(2156..>2817)
                     /locus_tag="VIQ50_09750"
     CDS             complement(2156..>2817)
                     /locus_tag="VIQ50_09750"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9360708.1"
                     /translation="TAGGCGPLLGGLIADHLHWSVIFWINIPMGLSALVIATTLLRRL
                     PRYERPHHLDFIGAALIVIASVSFMLVLNVAGVRYAWTSPPVLGLLAVALIMGSLFVL
                     RLLHAPEPLIPIFILKHPIVRCAIVANAFGWGSIIGLNVFLPMYLQGVMGLSPSRAGL
                     SLVVVMVALNTSAGLAGQVLGRVRHYKLLPMGGLLLAVAAIMNLAWHANDMTRCGSSS
                     P"
BASE COUNT          566 a          880 c          885 g          486 t
ORIGIN      
        1 gcgccgcggg ctcacggcct ttctgtttca tcgccatcag cccggcttcg agatcgtgcg
       61 gcgcattccg atcatggggc cggaggagca cggcgggcac tgcgaactgg tcttcgaggg
      121 gctcgaagtg cccgacgaaa acgtgctgat ggaagtcggc gacgggttgc gggtcaccca
      181 gatcaggctc gggcccgcgc ggctcaccca ttgcatgcgc tggctcgggc tcgccaagcg
      241 ctcgatggag atcgcgcagg cctacgtcgc tcagcgcgaa ggcttcggaa tgcggctggc
      301 cgaccgcgag agcgtgcaga tcaagctcgg cgagatcgcg catcaaatcc aaatcgggcg
      361 gctgttggtg atgcatgccg cctggaagct cgaccagggc gatcacgcgc gcaaggaggt
      421 ctccatggcc aagttgcacg tcgccgatac cttgcatcgc gcggccgacg ttgcgatcca
      481 gctcaatggt gcgcgcggct attccaagga cacgatcctg gaatggatat atcgctacgc
      541 gcggcaagca cgcctggtcg atggcgcctc cgaggtgcac aacatggtgc tcgcgcgttt
      601 catgcgcgag gagggccgcg atttctggcg ctggagcgca gggaatagag tctgagcagt
      661 tctcgcaaaa aagacgggcc gctaatcgac agggccgcgc tggcgttttt tcaggcacgc
      721 caaatggctg tgcaggtcca aattggcgaa aatattcaaa gatgcgctat cgaagtaacg
      781 atctatccca aatggcgggg cattcggttc aataattagc gcggaaccaa tcgcaaagtt
      841 ttgtcgcaag gaattttgaa aattactggc catgatcccc atatttcggt atcggaccca
      901 gccccgaaac gttccgcgac gcagaagatt tgggcccgct gtgctcgcaa agcccgagat
      961 aaaccatgca gattcgtatc ggattcgagg tggtctacga attcgtcgcg cgcacgccga
     1021 tggtgctgat gctcaacgtt cacccgtcgc gtgcagccga catcatcgaa cccgatgagc
     1081 ttcgcaccac accgacgctg ccgctcacgc gatatctcga tcagtttggc aatgtctgta
     1141 ctcggctggt ggcgccagcg ggtgagctca caatttccac ggatgcgctg attgccgatt
     1201 caggcctgcc ggacgcggtc gagctagcgg cgcgccagca cgagatcgca gagctgccac
     1261 acgatacgct ggcgttcctg ctcggcagcc ggtactgcga gaccgagcgt ctgatggagg
     1321 aggcctggtc gcgcttcggc aacacgctcc cgggttggcc gcgagtgcag gcgatctgcg
     1381 attttgtcca ttcccatgtc ggcttcggct accagcacgc ccgcgccacc aagaccgccg
     1441 ccgacgtcat ggtcgagcgc cgcggcgtat gccgcgactt tgcccacctg gcgatcacgc
     1501 tgtgccgttg catgaacatc ccggcgcgtt attgcaccgg atatctcggc gacatcaacg
     1561 tccctccaga gcccgagccc atggatttca gcgcgtggtt cgaggtctat cttggcggcc
     1621 gctggcacgc attcgacgcc cggcacaacg ttccgcgcat cggccggatc gtaatggccc
     1681 gggggcgcga cgccgccgat gtcgcattca gcacgacctt tggtcagaac gtgctcaagc
     1741 gcttcatcgt gcgcacggac gaggcggagc cgtccggcat cgatctcgtc gagcgcctag
     1801 tggcctgagc cgatcgcagt ctagcgcgcg tcgagttctg tcccggtctg cagcggcttc
     1861 tcttccatca acaagatcgc aatcagcgca atcgacatgc tcgccgctgc gaccaggaac
     1921 aactggccga aagcctcggc cgggtccgcc gcggcaaacg cgctgccgag tgattggccg
     1981 gccggcgtac cggccaggac gattgccccg aatatcgcga tcagcatggt cgcgaacaga
     2041 ttcctgctga agttcatcgt tcccacggaa atgccgaact gatggcgcgg cacgacgttt
     2101 tgcatggcaa ccgcggtgag ggacggcacc gggccgaagc ccgctccgat caggatcagg
     2161 gtgaactcga accacagcgg gtcatgtcgt tcgcgtgcca tgccaagttc atgatcgccg
     2221 caaccgcaag cagcagcccg cccatcggca ggagcttgta gtgccgcacg cgaccgagca
     2281 cctgtccggc gagaccggcg ctggtattga gcgctaccat cacgaccacg aggctcagcc
     2341 cggcgcggct tggcgaaaga cccatcactc cctgaaggta catcggcaga aaaacgttga
     2401 gaccgatgat cgagccccag ccgaacgcat tcgccacgat cgcgcagcgc acgatcggat
     2461 gcttgaggat gaatatcggg atcagcggtt cgggcgcgtg cagcaagcgc agcacgaaga
     2521 gagagcccat gatcagcgcg accgcaagca gcccaaggac cggtggcgac gtccacgcat
     2581 agcgcacgcc cgcgacgttc aatacgagca tgaatgagac gctggcgatg acgatcagcg
     2641 ccgccccgat gaagtccaag tgatgcggcc gctcgtagcg gggcagccgg cgcagcagcg
     2701 tggttgcaat caccaatgcc gagagcccca tgggaatgtt gatccaaaaa atgacggacc
     2761 aatgcagatg gtcggcgatc aagccgccga gcagcggtcc gcagccgccg gcggtgg
//
LOCUS       DATCWM010000499         6220 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_170988, whole genome shotgun sequence.
ACCESSION   DATCWM010000499 DATCWM010000000
VERSION     DATCWM010000499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6220
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170988"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1806)
                     /locus_tag="VIQ50_09755"
     CDS             complement(<1..1806)
                     /locus_tag="VIQ50_09755"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEY9360709.1"
                     /translation="MTQGIGARVQRKEDARHLHGRGNFVSDMLLPGQSEVAFLRSPIA
                     HGRIRRIVKPRGAENQVFIRDDLAGVAAMVAPTTVPGYKLSEWHPLAHGKVRFVGEAI
                     AMCVAPTRAEAEDLSEQIEVEFDELPVLVDAQAARAEETVRVHEQWGDNLFLTLNYES
                     GFEAKAKGAPVVIQREIALARQAMVPMEGKAVLAQWDDRTGQILVHASTQVPHIIRVG
                     LAQFLGIDQGQVRVVSPDVGGGFGYKCILQPEELCVAWLALKFRRPFRYVEDRREHLV
                     VGANSRQHRYRVTAHADERGKLLALDAEVTIDGGAYSAWPFTVALEPGQATGNLPGPY
                     DFRGYRCRTYCVATNKPGFLPYRGVARTGVCFAMELVIDAIARAVGREPWEVRYDNLV
                     SAADMPYDNVARKHYDSGDYRKALTLAREKLGFEAWRERQRRGERDGRLIGIGFASYC
                     EQTAHGTSVFSGWGLPIIPGYDQATVRVTPDGGLEVRAGVHSHGQGMETTLAQIAHEI
                     TRVDIANIRVVLGDTGTTPYSTGTYASRSIVMAGGAVANACRALIPRFLAIGAHLMQA
                     AVATMKFENGEIVGPRKSVSLREVAEAWYLRPQELP"
     gene            complement(1877..2968)
                     /locus_tag="VIQ50_09760"
     CDS             complement(1877..2968)
                     /locus_tag="VIQ50_09760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEY9360710.1"
                     /translation="MQRRAFLIRAGAGIAATAIASPAIAQTAAPVRWRLATSWPKSLD
                     TLYGSVEAMCQRVGQITDKKFQIQCFAGGEIVPPLQVWDATQNGTVECGHTLTSFNIG
                     KNPAVAFDSGLAFGLNTRQQQAWMNYGGGLELIRALFKKDGILPIPCGNVGVQMGGFY
                     RKEINSVDDLKGLKFRIGGLGGMILSKLGVVPQQIPTADIYPSLERGTIDAAEWIGPY
                     DDEKLGLHKVARYYYYPGWWEGSAQVTLLVNLQHWEALPESYRAALEAACAETTVLMM
                     AKYDTRNPEALRRLLAAGVQLRQFPRPVLDACYKAAFETYDELAARNPDFKLIYEPWQ
                     KFLADSNLWFRIAENTLDNYRFTMSAQPR"
     gene            3159..3725
                     /locus_tag="VIQ50_09765"
     CDS             3159..3725
                     /locus_tag="VIQ50_09765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018425834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEY9360711.1"
                     /translation="MATRMKPSRRLVQSTPRGTKIRRRAASKASLRPGTVHSEMPLWG
                     RPGYLLRRLHQIHYALFLEECAGYDITPVQYGLLTTLSLNPNLDQNSLARELGIDRTN
                     VADVLNRLARRGLVERRRSPNDARMVLARLTRAGDRLTRKMYRPMQRAQKRLLSPLLP
                     QERDTLMITLIRLINGNNHLGRAIFQPS"
     gene            complement(3773..4417)
                     /gene="maiA"
                     /locus_tag="VIQ50_09770"
     CDS             complement(3773..4417)
                     /gene="maiA"
                     /locus_tag="VIQ50_09770"
                     /EC_number="5.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008597711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016034 - maleylacetoacetate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maleylacetoacetate isomerase"
                     /protein_id="HEY9360712.1"
                     /translation="MSRDLYTFFRSSTSYRLRIALAHKRLEYTPNYVSLPKMEHRTPS
                     YRALHAQGLVPLLIDGDRSLIQSMAIIEYLDEVYPDPPLLPAETDGRHYVRAVSQIIG
                     CDIHPLNNVRVLKHLQTQFGADEAATKAWYRHWIAEGLGGLETYVAGAGFAGRFCYGD
                     TVTMADICLVPQIFNAQRFDCPIDDYRTLVAIFERCMALEAFHATQPNTQADAF"
     gene            complement(4421..4795)
                     /locus_tag="VIQ50_09775"
     CDS             complement(4421..4795)
                     /locus_tag="VIQ50_09775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018425833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360713.1"
                     /translation="MAQEPLATKGNFLHIYDFRVIKGKEEEFVRSFEEFDYSDGNPMH
                     KSRAQVKDGVLCRDTQDPQRFFLIAEWSDIEEHARIRKVLANEIKPQFIKYIEGGTFI
                     PKYVEVVSSTPDEILNKAAAAE"
     gene            5025..6035
                     /locus_tag="VIQ50_09780"
     CDS             5025..6035
                     /locus_tag="VIQ50_09780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012317981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY9360714.1"
                     /translation="MRRNLLALTIGIAVLSVAAPVGAEDHRIYGAELEGFDYPHDVYR
                     YAFRSQGSDMSMAYMDVKPQTANGRTAVLLHGRNFCAATWEKTIAVLNKAGFRVIAPD
                     QIGFCKSTKPLGYQFSIQQLATNTNALLTSLGVSRPIVIGHSLGGMTAMRYALMFPDA
                     VEQMILVNPIGLEDWQAAGFPFIDLDKGFEIEKATTFDSIKQYEQRFYYAGQWRPEYD
                     RWVEMLAGMYRGPGAERVAQVQARIAEMLFTQPVVHEFERIRVPTLLMIGQLDRTAPG
                     ANRAPPELAKELGNYPELGRAAARRIPKAELIEFPELGHAPQIQAPDQFHEALLKSLG
                     GR"
BASE COUNT         1163 a         1965 c         1905 g         1187 t
ORIGIN      
        1 cggcagctcc tgcggccgca ggtaccaagc ctcggcgacc tcgcgcagcg agactgattt
       61 ccgcggtccg acgatttctc cattctcaaa tttcatcgtc gctacggcag cctgcatgag
      121 gtgcgcgccg atcgcgagga agcgcgggat gagcgccctg caggcattgg cgaccgcgcc
      181 gcccgccatc acgatgctgc gcgaggcgta agtgccggtg gagtacggcg tggttccggt
      241 atcgccgagc acgacccgga tgttggcgat atcgacccgc gtgatctcgt gcgcgatctg
      301 ggcaagcgtc gtctccatgc cctggccatg cgagtggacg ccggcgcgga cttcgagccc
      361 gccgtccggg gtcacccgca ccgtcgcctg gtcgtagccg ggaatgatcg gcaagcccca
      421 tccggaaaag acgctggtgc catgcgcggt ctgctcgcaa tacgaggcga aacctatacc
      481 gatgagccgg ccatcgcgct cgccgcggcg ctgacgctcg cgccaggcct cgaagccgag
      541 cttttcgcgc gctagcgtaa gtgccttgcg atagtcgccg ctgtcgtaat gtttgcgtgc
      601 cacgttgtcg tagggcatgt cggccgccga gaccagattg tcgtaacgga cctcccatgg
      661 ctcgcggccg accgcacgcg cgatcgcgtc gatcactaac tccatggcaa agcagacgcc
      721 ggttcgggcc acgccgcgat agggcaaaaa gccgggcttg ttcgtcgcca cgcaataggt
      781 ccggcagcga tagccgcgga agtcgtaggg tcccggcagg ttgcccgtcg cctgccccgg
      841 ctccaacgcg acggtgaacg gccaggccga gtacgcgccg ccgtcgatcg tgacctccgc
      901 gtcgagcgcc aacaacttgc cgcgttcgtc ggcatgggcg gtcacgcggt aacgatgttg
      961 tcgcgagttg gcgccgacca ccaggtgctc gcgacgatcc tcgacgtagc ggaacggtcg
     1021 ccggaatttc aacgcgagcc acgcgacgca cagctcttcc ggctggagga tacatttgta
     1081 gccgaagcca ccgcccacgt cgggcgagac aacccgcact tgtccctggt cgatgccgag
     1141 gaactgcgcc aagccaacgc ggatgatatg cgggacctgg gtcgaggcat gcacgaggat
     1201 ctgcccggtg cgatcgtccc attgggccag cacggccttg ccctccatcg gcaccatggc
     1261 ctgccgcgcg agcgcgatct cgcgctggat gacgaccggc gcgcccttgg cctttgcctc
     1321 gaagccgctc tcgtagttga gcgtgagaaa gaggttgtcg ccccattgct cgtgcacgcg
     1381 cactgtttct tccgcccgcg ccgcctgcgc gtcgacaagc accggcagct cgtcgaattc
     1441 gacttcgatc tgttcgctga gatcttcagc ctcggcccgg gtcggcgcga cgcacatcgc
     1501 gatcgcctcg cccacgaagc gcaccttgcc gtgcgccagc ggatgccact ccgagagctt
     1561 gtaccccggc acggtcgtcg gtgcgaccat cgccgccaca ccggcgagat cgtcgcggat
     1621 gaaaacctgg ttttcggcgc cgcgcggctt gacaatgcgc cggatgcggc catgcgcgat
     1681 gggactgcgg agaaaggcga cctcactctg cccgggcagc agcatgtcgg atacgaagtt
     1741 gccgcggcca tgcagatggc gggcgtcctc cttgcgctgg accctggctc cgatgccttg
     1801 cgtcatattc gatcccggct gcaaagccac accgcggccg ccgcccgcgg ttttgtcaca
     1861 cggcggcaga actgcgctag cgcggctgtg cggacatcgt gaagcggtag ttgtcgagcg
     1921 tgttctcggc gatgcggaac cagagattcg agtccgccag gaatttctgc cagggttcgt
     1981 aaatgagctt gaagtccgga ttcctggcgg cgagttcgtc gtaagtctca aacgccgctt
     2041 tgtaacaggc gtccaagaca gggcgcggaa attgccgcag ctgaacgccg gcggccaaca
     2101 gccggcgcag cgcctcgggg tttcgcgtgt cgtacttggc catcatcagg accgtcgtct
     2161 cagcgcacgc cgcctcgagc gcagctcggt aagattccgg cagcgcctcc cagtgctgaa
     2221 gattgacgag aagcgtgacc tgagcgctgc cctcccacca gccgggatag tagtagtacc
     2281 tggcgacctt atgcagaccg agcttctcgt cgtcgtaagg accgatccac tcggccgcat
     2341 cgatcgttcc gcgttcgagc gacgggtaga tgtcggccgt gggaatttgc tgcggtacca
     2401 cgccgagctt cgacaggatc atgccgccga gcccgccgat gcggaacttg aggcctttaa
     2461 ggtcgtcgac cgagttgatc tccttgcggt agaagccgcc catctgcacg cccacattgc
     2521 cgcagggaat gggcaggatt ccatccttct tgaacaacgc gcggatgagt tcgaggccgc
     2581 cgccgtaatt catccacgct tgctgctggc gcgtattgag tccgaacgcg agcccggaat
     2641 cgaaggcgac cgcggggttc ttgccaatat tgaacgaggt aagggtgtgg ccgcactcga
     2701 ccgtgccgtt ttgcgtcgcg tcccagacct gcagcggcgg cacgatctca ccgccggcaa
     2761 agcactggat ctggaatttc ttgtcggtga tttgccccac gcgttgacac atggcctcga
     2821 cactgccgta aagcgtatcg agacttttcg gccagctcgt cgccaaccgc caacgcaccg
     2881 gggccgcggt ttgagcgatc gccggacttg caatggcggt cgccgcaatg cccgcgcccg
     2941 cccggatgag aaacgcacgc ctttgcattt tggctctccc gctgagatta actgtttgga
     3001 gcccgcacct gtcgggactt gtaatttgtt tttggccgtt gcatctgcgt gcagcgtcga
     3061 taaaagccta ccacagcccc gagcgcgtgc aagtatgaca gtatactgaa catttgccgc
     3121 tgtgtcgggc ggcagttgtg cgccgaggag aagaatgaat ggcgacgaga atgaagccgt
     3181 cacgcaggct tgtgcaaagc accccgcgtg gaacgaaaat ccggcggcgc gcggcgagta
     3241 aagcctcatt gcgtcccggc acggttcatt ccgagatgcc gctgtgggga cggcccggct
     3301 atctactgcg gcgcctgcac caaatccatt acgccctgtt cttagaggaa tgcgcgggat
     3361 acgacatcac accggttcaa tacggattat tgacgacgct ttcactcaat cccaatctcg
     3421 accaaaattc tttggcccgc gaattgggaa tcgaccgtac caatgttgcc gacgtcctca
     3481 atcgactcgc aagacgcggc ctcgtagagc gtcgccgcag cccgaacgac gcgcgcatgg
     3541 tgcttgcgcg gctgacccgc gccggcgatc gactgacgcg gaaaatgtac cgtccgatgc
     3601 aacgcgcgca gaaacgtctg ctcagcccgc ttctcccgca ggagcgcgat accctgatga
     3661 taacgctgat ccggctgatc aatggcaaca atcacctcgg ccgggcgatt ttccagccca
     3721 gttgaaatcc gatcgagtgt gaggagcgcc ggcggcgccg gccgtgtgcc gttcagaatg
     3781 cgtcggcttg agtattgggc tgcgtcgcat gaaaggcctc gagcgccatg catcgctcga
     3841 agatggcaac aagggtgcga taatcgtcga tggggcaatc gaagcgctgc gcattgaaaa
     3901 tctgcggcac caggcaaatg tccgccatgg tgacggtatc gccgtaacag aaccgaccgg
     3961 cgaagcccgc gccggccacg tacgtctcga ggccgcccag cccctcggcg atccaatggc
     4021 gataccatgc cttggtcgcc gcctcgtcgg caccgaattg cgtctggagg tgcttgagca
     4081 cgcggacgtt gttgagaggg tgaatgtcgc atccgataat ttgcgacacc gcccgcacgt
     4141 aatggcgtcc atccgtttcc gccggcagca gcggcggatc cggatagacc tcgtccaaat
     4201 attcgatgat ggccatggat tggatcaagg accggtcgcc atcgatcagc aacgggacca
     4261 atccttgggc atgcagcgcc cggtatgagg gcgtacgatg ctccatcttt ggcaggctca
     4321 cgtagttcgg cgtgtattcg agccgcttgt gcgccagtgc aatgcggagc cggtacgagg
     4381 tggaggaccg gaagaacgtg tacaaatcgc gtgacaacgt ctactccgcc gcggcggcct
     4441 tgttgagaat ctcgtctggt gtggaggaga ccacttcgac atacttcggt atgaatgtcc
     4501 cgccttcgat atatttgatg aattgcggct tgatttcgtt ggcgagcact ttgcggatgc
     4561 gcgcgtgctc ttcaatgtcc gaccattccg cgatcagaaa gaaacgttgc gggtcctgcg
     4621 tgtcgcggca cagcacgccg tccttcacct gcgcccggga cttgtgcatc ggattgccgt
     4681 ccgaataatc gaattcctca aacgagcgga cgaattcctc ctctttcccc ttgatcacgc
     4741 gaaaatcata gatgtgcaga aagttgccct tcgtcgcgag cggttcttgc gccatggcgt
     4801 cctcctgttg tcttagatac gacggtacgc tgatgaattt ttgaaagcaa ccgcgccggt
     4861 cgcgtgctgg tacaggatct caacgatacg ttggccgcgg cgtgcgccag cagcctttcg
     4921 ggccatacga gcggatgata tggtttgctc cgttccgcct catctgaccg tggatcgctt
     4981 gcttgacgac ttgccgcggt tgaaaccctg gcaggaggga cggaatgcgt cgaaaccttc
     5041 tcgctctcac gatcggcatc gctgtgctga gcgttgcggc accggtggga gctgaagacc
     5101 accgtatcta cggcgccgag cttgagggtt tcgactatcc tcatgatgtg taccgctacg
     5161 ccttcagatc gcagggcagc gatatgtcca tggcctacat ggatgtgaaa ccgcaaaccg
     5221 cgaacgggcg aactgcggta cttttgcacg gccgcaattt ctgcgccgcg acctgggaaa
     5281 agacgatcgc cgttctcaac aaggccggct tccgcgtcat tgcgcccgac cagatcggat
     5341 tctgcaaatc gacgaaaccg ctcggctatc agttcagcat tcagcaactg gcgaccaata
     5401 ccaacgcgct gctgacctcc ctcggcgtct cccgacctat cgtcattggt cattccctcg
     5461 gcggcatgac ggccatgcgc tatgcgctga tgtttccgga tgccgtggag cagatgatcc
     5521 tggtcaatcc gatcgggttg gaggactggc aggcggcggg cttcccgttc atcgacctcg
     5581 acaaggggtt cgagatcgag aaggcaacga ccttcgacag catcaagcaa tacgagcaga
     5641 ggttctacta cgccggccag tggcggcccg aatacgaccg ctgggtggag atgctcgccg
     5701 gcatgtatcg cgggccgggc gccgaacgcg ttgcgcaggt gcaggcgcgg attgcggaga
     5761 tgctttttac ccagccggtc gtgcatgaat tcgagcgcat tcgggtgccg acgctgctga
     5821 tgatcggaca attggatcgc accgcgccgg gggcaaatcg cgcaccccct gaactcgcca
     5881 aagagcttgg caactatccc gagctgggcc gcgccgcagc aaggcgcatc cctaaggccg
     5941 aactcatcga gttcccggag cttgggcacg ccccgcagat ccaggcgccc gaccaattcc
     6001 atgaggctct gttgaaaagc ctcggcggcc gctaaagcgg atcgtcggca gcatgatgcc
     6061 gtcgggggcc cgcgccacgc gcatcatctc ttcacattac cgcaaaatcc gtccaatcac
     6121 cgcaaacgcc gcagagctag tcgccctttc catcactaat ctaagcacgc gtccggtttg
     6181 cggccccccc tctgccgaaa tcgggccttc gcgaccggcc
//
LOCUS       DATCWM010000500         2580 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_79263, whole genome shotgun sequence.
ACCESSION   DATCWM010000500 DATCWM010000000
VERSION     DATCWM010000500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2580
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79263"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..715
                     /gene="cobM"
                     /locus_tag="VIQ50_09785"
     CDS             <1..715
                     /gene="cobM"
                     /locus_tag="VIQ50_09785"
                     /EC_number="2.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007774540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0046026 - precorrin-4
                     C11-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="precorrin-4 C(11)-methyltransferase"
                     /protein_id="HEY9360715.1"
                     /translation="TVRGRDLLARCPVCLYAGSIIPHALLAHCPSGARIVDTAPMSLD
                     EIEAEFVSAQEQGLDVARLQSGDLSVFSALAEQLRRLDQHGIPYTLTPGVPAFAAAAA
                     ALGRELTVPEIAQSVVLTRIPGRASRMPEGETLAAFAATGATLAIHLAIHALDRVIAE
                     LIPFYGADCPVAVVAHASWPEEKIVRGTLGDIPSKLAAEPIERTALILVGRALAAEDF
                     RDSALYDADYRRRFRGGAA"
     gene            complement(682..1809)
                     /locus_tag="VIQ50_09790"
     CDS             complement(682..1809)
                     /locus_tag="VIQ50_09790"
                     /EC_number="2.1.1.195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008836462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalt-precorrin-5B (C(1))-methyltransferase"
                     /protein_id="HEY9360716.1"
                     /translation="MATKASPLRRGWTTGTCATAAAKAAYTALLTGEFPDPVEVTLPR
                     GGGRPAFALATTVRGEGSATAGVVKDAGDDPDVTHGALVLTTVRRGAQGSGVSFRAGE
                     GVGTVTRAGLPVPPGEPAINPVPRQMIRAAIAEIAAANGDPGDVEVEIAIPGGEALAA
                     KTMNGRLGIIGGLSILGTTGIVIPYSCSSWIQAIRSGIDVARAAGLTHVAGSTGAESE
                     RAVQRMYGLPEIALIDMGDFVGGMLKYLRSHPVPRVTIAGGVGKMTKLAQGLLDLHSK
                     RGSVDLVALAKLAERAGGSRDLAAYILTANTAAEAFVHAEAEGVALGDEVASAAREAA
                     TAVVAGKDIEIEVVLFDREGRLVGRAPFAASHAAPPRKRRR"
     gene            1863..>2580
                     /locus_tag="VIQ50_09795"
     CDS             1863..>2580
                     /locus_tag="VIQ50_09795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013894794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042242 - cobyrinic acid a,c-diamide
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobyrinate a,c-diamide synthase"
                     /protein_id="HEY9360717.1"
                     /translation="MTARGLIVAAPRSGAGKTTVTLGLLAALKRRGLAVQAAKAGPDY
                     IDPAFHQAATGRKSVNLDSWAMRPSLLDALVVEAASRADMLVIEGVMGLFDGIDAAAG
                     RTGSTADLAARFVLPVLLVIDVSGQSQSAAALLRGFVTHDPEVKIGGVVLNRVGSERH
                     RKFVADAIAASGIPVLGSVPRDEMIALPERHLGLVQAGEHGDLAERLDRLAAIAETHL
                     DLDRILKLAEPARLAEVQSEP"
BASE COUNT          393 a          889 c          854 g          444 t
ORIGIN      
        1 caccgtgcgc gggcgcgatc tcctcgcgcg gtgccccgtc tgcctctacg caggctccat
       61 tattcctcat gcgctgttgg cccattgccc atctggcgcc cgcatcgtgg atacggcgcc
      121 gatgtcgctc gacgagatcg aggcggagtt cgtttccgcg caggagcaag gcctcgacgt
      181 ggcgcggctg caatcgggtg atctttcggt gtttagcgca ttagcagagc agctgcggcg
      241 gcttgaccag cacggcattc cctacacgct gaccccgggc gttccggcct tcgccgcggc
      301 agcggccgcg ctcggtcgcg agctgaccgt gcctgagatt gcgcaaagcg tggtgctgac
      361 ccgcatccca ggccgcgcct cgcgcatgcc ggaaggcgaa accctcgccg ctttcgctgc
      421 gaccggtgcc acgcttgcaa ttcatcttgc catccatgcc ctcgacagag tcatcgccga
      481 gctgatcccg ttctatggcg cggactgccc ggtggccgtg gtggcccatg caagctggcc
      541 ggaggaaaag atcgtgcgcg gcacgctcgg cgatatcccg tcgaagctcg cggcggagcc
      601 catcgagcgc acagcgctga tcctggttgg ccgcgccttg gcagcggaag actttcgcga
      661 cagcgcgctt tacgacgccg attatcgccg ccgcttccgc gggggtgccg catgagaagc
      721 cgcaaacggc gcgcggccca cgagcctgcc ctcgcggtcg aacaaaacga cctcgatttc
      781 gatgtccttg cccgcaacga cggcagtggc tgcctcacgg gcggcactcg ccacttcgtc
      841 gccgagcgca acgccttcgg cctcggcatg aacgaaggct tcagccgctg tattggcagt
      901 gagaatgtac gcggcaaggt cgcgcgagcc gcctgcacgt tcggcaagct tggcgagcgc
      961 cacgaggtcg accgaaccgc gtttggagtg aagatcgagc agcccttggg cgagcttggt
     1021 catcttgccg acgccgccgg caatggtcac ccgcggcacc ggatggctgc gcagatattt
     1081 cagcatgccg ccgacgaagt cgcccatgtc gatcagcgct atctcgggga ggccgtacat
     1141 tcgttgcacc gccctctcgg actccgcacc ggtcgagcca gcgacatgcg tgagccctgc
     1201 cgcgcgcgcg acgtcgattc cgctcctgat cgcctggatc caggacgagc aggaataagg
     1261 aatgacgatt cccgtggtgc cgaggatcga gaggccacca atgataccga gccggccgtt
     1321 catcgtcttg gcggccagcg cctccccgcc tgggatggcg atctcgacct cgacatcgcc
     1381 tggatcaccg tttgccgcgg cgatctcggc aatcgccgcg cgtatcatct gccgcggcac
     1441 ggggttgatg gcgggctcgc ccggcggcac cgggagtccc gcacgcgtga ctgtgccgac
     1501 gccttcgccg gccctgaagc taaccccgct gccttgcgcg ccacggcgga cggtggtgag
     1561 gacgagcgcg ccgtgggtca cgtcagggtc atcgccggcg tccttgacca cgcccgcggt
     1621 tgcggacccc tcaccgcgaa ccgtcgtggc gagcgcgaag gcagggcgtc cgccgccgcg
     1681 cggcagcgtg acctcgaccg gatcgggaaa ctcgccggtg agcagcgcgg tataggcggc
     1741 cttggcggct gccgtggcgc aggttcctgt ggtccagccg cggcgaagcg gggatgcctt
     1801 cgttgccatg gcccccgcta taacgccccg ggacgcagcg gtcacttgac gtggtgggcc
     1861 ggatgacggc ccgtggtctc atcgtcgccg cgccgcgctc cggcgcaggc aagaccacgg
     1921 tgacgcttgg cttgcttgcg gcgttgaaac ggcgcgggct tgccgtgcaa gcggccaagg
     1981 ccggccccga ctatatcgac ccggccttcc accaagccgc gaccggcaga aagagcgtca
     2041 atctcgacag ttgggccatg cggccctcgc tgctcgacgc gctagtagtc gaggccgctt
     2101 cgcgcgccga tatgctcgtg atcgaaggcg tcatgggcct gttcgatggg atcgatgccg
     2161 ccgcaggccg gactggctcg actgccgacc ttgccgcccg tttcgtcctt ccggtcttgc
     2221 tggtcatcga tgtctcgggg cagtcgcaat ccgcagcggc gctcctgcgc ggcttcgtca
     2281 cccatgatcc ggaggtgaag atcggcggtg tcgtgctcaa tcgcgtcggc agcgagcggc
     2341 atcgcaaatt cgtggccgac gccatcgcag catcgggcat ccccgttctc ggctcggtgc
     2401 cgcgtgatga gatgatcgct ctgccagagc ggcatcttgg cctcgttcag gccggcgagc
     2461 atggagacct tgctgaacgg ctcgaccgcc tcgcggcaat cgccgagacc cacctcgacc
     2521 tggaccgcat cctgaagctt gccgagccag ctcgccttgc agaggtgcaa tctgaaccgg
//
LOCUS       DATCWM010000501         4686 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_537894, whole genome shotgun sequence.
ACCESSION   DATCWM010000501 DATCWM010000000
VERSION     DATCWM010000501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4686)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4686)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4686
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_537894"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..270)
                     /locus_tag="VIQ50_09800"
     CDS             complement(<1..270)
                     /locus_tag="VIQ50_09800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdenumtransferase MoeA"
                     /protein_id="HEY9360718.1"
                     /translation="MAQLTDDCFAFSGPLLPVDEVERIIGERVTPVAEVETVPLQAAD
                     GRVVARDVVAPIDLPPFDNSAVDGYAVRHADLDAKVDTRLTVAERV"
     gene            complement(270..797)
                     /gene="mobB"
                     /locus_tag="VIQ50_09805"
     CDS             complement(270..797)
                     /gene="mobB"
                     /locus_tag="VIQ50_09805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HEY9360719.1"
                     /translation="MRIIGLAGWSGSGKTTLLAKVIPRIVARGLEVSTLKHAHHGFDV
                     DQPGKDSHTHRMAGATEVLVGSAKRWALVHELRGEAEPALPALLEKLSPVDLVLVEGY
                     KREPHPKLEVYRASVSKPLMHPDDPAIVAIASDAPLPATRVPVVDIDDIERVADILIR
                     HAAPIAAVLAHAESR"
     gene            complement(848..1870)
                     /locus_tag="VIQ50_09810"
     CDS             complement(848..1870)
                     /locus_tag="VIQ50_09810"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019173740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009326 - formate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0008863 - formate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009061 - anaerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit gamma"
                     /protein_id="HEY9360720.1"
                     /translation="MPKLTARLRFIVGAMALALIVALAAPATAQQRNPDSSVNPTASS
                     VREDQLLNELDRISGRCTIPDQKACTIEQPAGRDWRHFHEVTLRWIGAISILGMLALL
                     VIFYLVRGMVRLESGRSGRVLVRFSAFERLVHWMTAACFILLAISGLNITFGRPLLLP
                     LIGPDAFTAWSQWAKYAHNYLSFPFTLGVFTIFLMWIAWNIPNRVDVEWLKRGGGIVG
                     HDHPPADRFNAGQKMIYWIVVLGGTAVAVSGYILMFPFYGTNIADMQVAQIVHGVAAL
                     LFVAVMLGHIYIGTIGMEGAFEGMWDGTVDVNWAKEHHRVWLEKETAEGHVAPPPPKG
                     KMQPAE"
     gene            complement(1960..2556)
                     /gene="fdh3B"
                     /locus_tag="VIQ50_09815"
     CDS             complement(1960..2556)
                     /gene="fdh3B"
                     /locus_tag="VIQ50_09815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase FDH3 subunit beta"
                     /protein_id="HEY9360721.1"
                     /translation="MARMKFLCDADRCIECNACVTACKNEHEVPWGINRRRVVTINDG
                     KPGERSVSMACMHCTDAPCAAVCPVNCFYTTADAVVLHSKDLCIGCGYCFYACPFGAP
                     QYPKVGNFGSRGKMDKCTYCSGGPEPDGSLAEFEKYGTNRLAEGKLPLCAEMCSTKSL
                     LAGDGEIIAQIYKERVVKRGYGSGAWGWKTAYRETIAS"
     gene            complement(2569..>4686)
                     /locus_tag="VIQ50_09820"
     CDS             complement(2569..>4686)
                     /locus_tag="VIQ50_09820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HEY9360722.1"
                     /translation="HATEFVRVRPGTHIPTIYGMLWHIFQNGWEDKEFIRQRVYGMDE
                     VRKEVEKWTPDEVERVTGLPEAQVKRVAEIFAKQRPSTLIWAMGQTQFTVGTANVRAS
                     CILLLATGNVGNFGNGANIFRGHCNVQGATDLGLDIVTLPLYYGLVEGAWKHWCRVWE
                     VDYDWMLSRFDSKQVMETPGIPSTRWFDATLLPKDQVAQKDNLKAMLVFGHGGNTVTR
                     MPQAAKGIEKLELLVVGDPHPTTWAALSERKNDTYLLPICTQFETSGSRTASNRSLQW
                     GEQIVKPIFESKDDYEAMYLLAKRLGLADLMFKNIKLEGSRPLAEDILREINRGGWST
                     GYCGQSPERLKLHMANQKDFELVTLRAKDGPAKGDYYGLPWPCWGTPEFKHPGTHTLY
                     NTNLNVKDGGSTFRARFGVEREVKLPDGTTRKDNLLAEGSYSLGSEIQDGYPEFTYGV
                     LKKLGWDKDLTPAEKAVIERVGGNNPDAVSWAIDLSGGIQRVAMEHGCIHYGNGKARA
                     NAWNLPDPIPVHREPIYTPRADLVAKYPTRPDAKEFRVPNTGFTVQKTAVEKGIAKQF
                     PLILTSGRLVEYEGGGEETRSNKWLAELQQDMFIEINPADAAERGIRDGGWVFVWGPE
                     MESGKATRMKALVTERVGKGVTWCPFHFAGWFQTVDQRGNYPKGCDPIVLGESVNTIT
                     TYGFDPVTGMQEPKATLCQIKAA"
BASE COUNT          804 a         1496 c         1509 g          877 t
ORIGIN      
        1 tacgcgctcc gccacggtga gccgcgtgtc caccttggca tcgagatcgg cgtggcgcac
       61 ggcgtagccg tcaaccgcgg aattgtcgaa cggcggcaga tcgatcggcg cgaccacgtc
      121 gcgcgcaacc acgcgcccgt ccgcggcctg gagaggaacg gtttcgacct ccgcgaccgg
      181 ggtaacccgc tcgccgatga tgcgctcgac ctcatccacc ggaagcagtg ggccggagaa
      241 cgcgaagcag tcgtcggtca gctgcgccat caccggctct ccgcgtgcgc caggacggcc
      301 gcgatcggcg ccgcgtgccg gatcagaatg tcggcgacgc gctcgatgtc gtcgatatcg
      361 acgaccggaa ctcgcgtcgc gggcaatggc gcatcggagg cgatggcgac gatcgccggg
      421 tcgtcgggat gcatgagcgg cttgctcacg ctggcacgat agacttcgag cttgggatgc
      481 ggctcgcgtt tgtagccttc gaccagcacg agatcgaccg ggctgagctt ctcgagcagt
      541 gcgggcagcg cgggctcagc ttctccgcgc agctcatgca cgagcgccca acgcttggct
      601 gagccgacca gcacctcggt tgccccggcc atgcgatggg tgtgggaatc cttgcccggc
      661 tggtcgacgt cgaaaccgtg atgggcgtgc ttgagcgtcg atacctcaag gccgcgcgcg
      721 acgatgcggg gaatgacttt ggcgaggagc gtggtcttgc cggagccgct ccagccggcg
      781 aggccgataa tgcgcatgca gcattatagc aggcctgcgc cgcggaaaag cgcgtagggt
      841 ttgggtccta ctccgccggc tgcatcttcc ctttcggcgg cggcggcgcg acatgaccct
      901 cggccgtttc tttttcgagc cacacgcggt gatgctcctt cgcccaattg acgtcgacgg
      961 tgccgtccca catcccttcg aacgcgcctt ccatcccgat cgtgccgata tagatgtggc
     1021 cgagcatgac ggcgacgaac agcagcgcgg ccacgccatg gacgatttgc gccacctgca
     1081 tgtcggcgat gttggtgccg tagaacggga acatgaggat atagccgctc accgcgaccg
     1141 cggttccacc gagcacgacg atccaataga tcatcttctg accggcgttg aagcgatcgg
     1201 caggaggatg atcgtggccg acaatgccgc cgcctcgctt cagccactcg acgtcgaccc
     1261 ggttcgggat attccaggcg atccacatca ggaagatcgt gaacacgccg agcgtgaagg
     1321 ggaagctcag ataattgtgc gcgtatttcg cccactgcga ccaagcggtg aaggcgtcgg
     1381 ggccgatcaa cggcagcagc aacggtctac cgaaggtgat gttgagaccg gaaatggcga
     1441 gaagaatgaa gcaggccgcc gtcatccagt gcaccaggcg ctcgaaggcg gaaaagcgta
     1501 ccagcacgcg tccggaccgc cccgattcga gtcggaccat gccgcggacc agatagaaga
     1561 tcaccagcag cgcgagcatg ccgaggatgg agatggcgcc gatccagcgc agcgtcacct
     1621 catggaagtg acgccagtcg cggccggccg gctgctcgat ggtgcaggcc ttctggtcgg
     1681 ggatcgtgca acggccggaa atgcggtcta gctcgttgag aagctgatcc tctcgcaccg
     1741 agctcgccgt ggggttgacc gagctgtcgg gatttcgctg ctgcgcggtc gcgggagccg
     1801 caagagcgac gatcaacgca agcgccatcg cgccgacaat gaaacggagg cgagcagtga
     1861 gtttcggcat ctctgcagtt cccttgatcg attctttcgt cgctcaagaa gcgtggtgga
     1921 ctcgccccgc ttgatcatgc ggctgcgcgc cgtcctcctc tatgaggcga tcgtctcacg
     1981 ataggctgtc ttccagcccc aggcaccgga cccgtagccg cgcttgacca cgcgctcctt
     2041 gtagatctgc gcgatgatct cgccgtcgcc ggcgagcagc gacttggtcg agcacatctc
     2101 ggcgcagagc ggcaatttgc cttccgccag ccggttggtg ccgtacttct cgaactcggc
     2161 caacgagccg tccggctccg gcccgcccga gcaataggtg catttatcca tcttgccgcg
     2221 cgaaccgaag ttgccgacct tggggtattg cggcgcgccg aacgggcagg cgtagaagca
     2281 atatccgcag ccgatgcaga ggtctttcga gtgcagcacc acggcgtcgg cggtggtgta
     2341 gaagcagttc accggacaga ccgccgcgca aggcgcgtcg gtgcagtgca tgcacgccat
     2401 gctgaccgag cgctcacccg gcttgccgtc attgatcgtg acgacccggc ggcggttgat
     2461 gccccacggc acttcatgct cgttcttgca ggcggtgacg caggcgttgc actcgatgca
     2521 acggtcggcg tcgcagagaa atttcatccg agccattgtc gagtctcctt acgcggcctt
     2581 gatctggcaa agcgtggctt tgggttcttg catgccggtg acgggatcaa atccgtaggt
     2641 cgtgatcgta ttcacgctct cgccgagcac gatcgggtcg cagcctttcg gatagttccc
     2701 gcgctggtcg acggtctgga accagccggc gaagtggaac ggacaccagg tcacgccctt
     2761 gcccacgcgc tcggtgacga gcgccttcat gcgcgtggcc ttgccactct ccatctccgg
     2821 accccagaca aagacccagc cgccgtccct aattccgcgc tcggcggcgt cggcaggatt
     2881 gatctcgatg aacatgtcct gctgcagttc ggcgagccac ttgttggaac gcgtctcctc
     2941 gccgccgccc tcgtattcca ctaaccggcc ggaggtgagg atgagcggga attgcttggc
     3001 gatgcccttt tccaccgcgg tcttttgcac ggtgaagccg gtgttcggca cgcggaattc
     3061 cttggcgtcg ggccgcgtcg gatatttggc gacgaggtcc gcccgcggcg tgtagatcgg
     3121 ctcgcggtgc accggaatcg gatcgggcag attccacgca ttggcgcgcg ccttgccgtt
     3181 gccgtagtgg atgcagccgt gctccatcgc cacccgctgg atgccgccgg agagatcgat
     3241 cgcccacgaa accgcatcgg gattgttgcc gccgacgcgc tcgatgacgg ccttctcggc
     3301 gggagtgagg tccttgtccc agccgagctt cttgagcacg ccgtaggtga actcggggta
     3361 gccgtcctgg atctctgagc cgagcgagta cgagccctcg gccaagaggt tgtccttgcg
     3421 cgtggtgccg tcgggaagct tgacctcgcg ctccacgccg aagcgggcgc ggaaggtgct
     3481 gccgccgtcc ttcacgttca gattcgtgtt gtatagcgtg tgggtgccgg gatgtttgaa
     3541 ctccggcgtg ccccagcacg gccacggcag gccgtaatag tcgcccttgg ccggaccatc
     3601 ctttgcccgc aacgtgacga gctcgaagtc cttctggttg gccatatgta gcttgagccg
     3661 ctccggcgat tggccgcagt aaccggtcga ccagccaccg cgattgatct cgcgcaggat
     3721 gtcctcggcg agcggccgac taccctcgag cttgatgttc ttgaacatca gatcggcgag
     3781 gccgagccgc ttcgccaaga gatacattgc ctcgtaatcg tccttggact cgaagatcgg
     3841 cttgacgatc tgctcgcccc attgcagcga gcggttcgac gccgtgcgcg atcccgaggt
     3901 ctcgaactgc gtgcagatcg gcaagagata ggtatcgttc ttgcgctcgc tgagcgcggc
     3961 ccacgtcgtt ggatgcgggt caccaaccac gagcagctcg agcttctcga tgcccttggc
     4021 cgcttgcggc atccgggtga cggtgttgcc gccgtgcccg aacaccagca tcgccttgag
     4081 attgtccttc tgggcgacct ggtctttcgg cagcagcgtc gcgtcgaacc aacgggtcga
     4141 cggaatgccc ggcgtctcca tgacctgctt ggagtcgaag cgcgacagca tccagtcgta
     4201 gtcgacttcc caaacgcggc accagtgctt ccacgcgcct tcgaccagac cgtagtagag
     4261 cggcagcgtc acgatatcga gaccgaggtc ggttgccccc tgcacgttgc aatggccgcg
     4321 gaagatgttg gcgccgttgc cgaagttgcc gacgttgccg gtcgccagga gcaggatgca
     4381 gctggcgcgg acgttggcgg tgccgaccgt gaactgggtc tgtcccatcg cccagattag
     4441 cgtcgagggc cgctgcttgg cgaatatctc ggcaacgcgc ttgacctgcg cttccggcaa
     4501 cccggtgacg cgctcgacct catccggcgt ccacttctcg acctccttgc gcacctcgtc
     4561 catgccgtag acgcgctgac ggatgaattc cttgtcctcc cagccgttct ggaagatgtg
     4621 ccacagcatc ccgtagatcg tcgggatgtg ggtgcccggc cgcacgcgca caaattcggt
     4681 cgcgtg
//
LOCUS       DATCWM010000502         4577 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_495057, whole genome shotgun sequence.
ACCESSION   DATCWM010000502 DATCWM010000000
VERSION     DATCWM010000502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4577)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4577)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4577
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_495057"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..783)
                     /locus_tag="VIQ50_09825"
     CDS             complement(106..783)
                     /locus_tag="VIQ50_09825"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016842663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEY9360723.1"
                     /translation="MGKHFSLTSADQFQLGAYRADPAGPAKGGIVVIQEIFGVNHHIR
                     AVCDRLAGEGYAALAPALFDRQHKDFESGYTPDEIANARKFVANPDWGAMLRDTQAAI
                     DELKKEGPVAIMGFCMGGTIAFLAACKLNGLSAAICYYGGQIAKNADEKPKVPTQMHF
                     GDQDASIPMSDVEMIKKKRGGDSEIYVYAGAQHGFHCDERGSFHEASAKTGWQRAMDF
                     LKKHLKK"
     gene            complement(912..1928)
                     /locus_tag="VIQ50_09830"
     CDS             complement(912..1928)
                     /locus_tag="VIQ50_09830"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEY9360724.1"
                     /translation="MLARPIALSVLDLSPVAAGSSGAVSLRNSLDLARLADRLGYTRY
                     WLAEHHNLPSIASSAPDIMIGQVAVATERIRVGSGGVMLPNHAPLMVAERFKVLEALF
                     PGRIDLGLGRAPGTDPVTSYALRRRQNAGEDDFLERLQELLLFESNAFPEGHPFRSVR
                     AMPQDVALPPIWLLGSSGYSAQLAAVLSAGFSFAHHFADHDPVAAMLSYRDQFKPSPA
                     RQAPYAILACAAVCADSEAEAQRLASTIDLNFVRRSHGEYSPLASPEDAAAYPYSPAE
                     RGLIARNRRRLFVGTKATVLEQLSQTIAATKADEVMITTMLYDHAARRRSYELLAEAF
                     GLRP"
     gene            complement(1938..2144)
                     /locus_tag="VIQ50_09835"
     CDS             complement(1938..2144)
                     /locus_tag="VIQ50_09835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360725.1"
                     /translation="MTPEQVSGALGVPLVYYSGRAGSEVYLAYGSPGIPGFYPTYSAL
                     ALQFRNGQLTGWKKDWRLRRPWPF"
     gene            complement(2420..3238)
                     /locus_tag="VIQ50_09840"
     CDS             complement(2420..3238)
                     /locus_tag="VIQ50_09840"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEY9360726.1"
                     /translation="MRFDDGDVSDENIVDGWEHLKPSGRQQTTTVRARVGAKHVTSQW
                     VDCERAFIAQRYDRIAGLIGLFDRLLFLPSHLRRRATMGLRLKPGDRVLEIGCGTGRN
                     LPFLREAVGPAGKVYGVDLSSGMLRRARALCRREQWENVELTQCDGLEFIPCEPLDGI
                     MFGLCYNTMPHHLAVLRHAWKHLHPGRRIVIMDGKLPHGRGGKLVLPFALWLMKHTLL
                     GNPFIKPWNDLAAIADEFEMEEFLFGSWYVCWGTKSAGAQSYDLLPAEQLLAAE"
     gene            complement(3402..4361)
                     /locus_tag="VIQ50_09845"
     CDS             complement(3402..4361)
                     /locus_tag="VIQ50_09845"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY9360727.1"
                     /translation="MSRSAAGKEPIPTSEATGVIAPAKTARREHVPLGILYMVGATVV
                     FAVSSAVSKWLVASYSIGEVLFTRTAIALLTCALFIIPQTGLAVFRTQRLRHHALRSV
                     SQGCSQTFLLIAFSLMPLAGAIAINFSSPLFATLISALVLKEAVGLARWLALLVGFCG
                     VLIVANPDAGTFQIGALFALANAVLYGSVTVGVRGMTATESAETLILYQLALLTAFFA
                     LLLPLGWAWPTPADTAWIVFNGVSNAVGQYWWTRALHLAPASAVAPFFYLSLVWASIL
                     GFAIWGDLPTISLVIGSAVVVASGLFLLWRESNARQTKLAATE"
BASE COUNT          862 a         1450 c         1508 g          757 t
ORIGIN      
        1 gagcgcgctc acgcacggcg ccttgggcgc gttcctcgcc tctgcgtcac gccccgaaac
       61 gacgggccgg caagctgatg cccggccaat cggccggcta gcggctcact tcttcagatg
      121 cttcttgagg aaatccatcg cgcgctgcca ccccgtcttg gcgctcgctt cgtggaagct
      181 tccacgctca tcgcaatgga atccgtgttg cgcgcctgca tagacgtaga tttcgctgtc
      241 gccgccgcgc ttcttcttga tcatttccac gtcgctcatc ggaatcgatg catcctggtc
      301 gccgaaatgc atctgcgtgg gtaccttcgg cttctcgtcg gcgttcttgg cgatttgccc
      361 gccgtaatag cagatcgcgg ccgaaaggcc gttgagcttg caggcggcga ggaaagcaat
      421 ggtgccgccc atgcagaagc ccatgatggc gactgggcct tccttcttca gctcgtcgat
      481 cgcggcttgc gtgtcgcgta gcatcgcgcc ccaatcggga ttggcgacga atttgcgcgc
      541 gttggcgatt tcgtccggcg tatagcccga ctcgaagtcc ttgtgctgac gatcgaacag
      601 cgccggggcc aacgccgcgt agccttcgcc ggcgagtcgg tcgcagaccg cgcggatgtg
      661 atgattgacg ccgaagattt cctggatgac gacgatgccg ccctttgcgg ggcccgccgg
      721 atcggcacga taggcaccca actgaaattg atcggcggac gtgagcgaga agtgcttacc
      781 caaggcgacc tcctttagag tgttgccggc ggcccaatgt gcctccccgg catcgcaccg
      841 caatgtcacg ctttcgtcgc cgcaaagcaa ctgcccgcga acgccgagcg agcatgctcg
      901 ccgccgggaa cttacgggcg cagtccgaac gcctctgcca gcagttcgta ggaacgccgg
      961 cgggcggcat ggtcgtagag catcgtggtg atcatcactt catcggcttt ggtggcggcg
     1021 atcgtctgtg aaagctgctc gagcaccgtc gccttcgtgc cgacaaacag gcgccggcga
     1081 ttgcgcgcga tcaatccgcg ctcggccggc gagtagggat aagccgcggc gtcctccgga
     1141 ctcgccaacg gcgaatattc cccgtgactg cggcgcacga aattgagatc gatggtcgag
     1201 gcgaggcgtt gcgcttccgc ctcgctgtcg gcgcaaaccg cggcgcaggc cagaatggcg
     1261 tagggcgcct gccgggcggg ggacggcttg aactgatcgc ggtagctgag catcgcggcg
     1321 accgggtcgt gatcggcgaa atgatgcgcg aaggaaaatc cggcactcag cacggcggcg
     1381 agctgcgcgc tgtagccgct cgatcccaag agccagatcg gaggcagcgc cacgtcctgc
     1441 ggcatggcgc gcacggaacg gaacggatgg ccttccggga aggcgttgct ctcgaacagg
     1501 agcagttcct gcagccgctc cagaaaatcg tcctcgccgg cattctgccg ccgccgcagc
     1561 gcataagagg tgaccggatc ggtgccgggc gcgcggccga ggccgagatc gatgcggccg
     1621 ggaaacagcg cctccagcac tttgaaccgc tcggccacca tgagcggagc gtgatttggc
     1681 agcatgacgc cgccggagcc gacccggatg cgttcggtcg ctaccgcgac ctgcccgatc
     1741 atgatgtcgg gcgcggaact cgcgatcgag ggcaaattgt ggtgttcggc taaccagtat
     1801 cgcgtgtagc caagccgatc tgccagccgc gcgaggtcga gcgaattgcg cagcgaaact
     1861 gcgccggagg agcctgcggc gaccggcgac agatcgagga cggagagagc gatgggtcgc
     1921 gccagcatac gcgcgcgtca gaacggccac gggcgacgca agcgccaatc ctttttccat
     1981 cccgtgagct gcccgttgcg aaactgcagc gcaagggcgg aataggtcgg atagaaaccg
     2041 ggtatgcccg gcgatccata ggcgagatag acctccgagc ctgcccggcc ggagtagtag
     2101 acgagcggca cgccgagcgc gcccgaaacc tgctcggggg tcatgccaaa agcgagcggc
     2161 gccgtattgg attcggttcc gcaaaaggcg gcccaacaga tgcaaagcga cgcaacgacg
     2221 cgcttgaatg ccaatgctcg tctcccgccg ggatgcggcg caacgcgcac ggccgtccgc
     2281 ccacgcgcgc gcccatcttc ggtccactca tggaagccag tcaagcttgt ggggagggcg
     2341 catattggcc gcgacgccgg cgcgcaacaa cgatgcgggc tgacggtttt cgccgcggct
     2401 atggcgcgtg cggagatttt tactccgccg cgaggagctg ctccgcgggc aacagatcgt
     2461 agctctgcgc gccggcggat ttcgttcccc agcagacgta ccaggagccg aagaggaact
     2521 cctccatctc gaactcgtcg gcgattgcgg cgaggtcgtt ccacggcttg atgaaagggt
     2581 tgccgagcag ggtgtgcttc atcagccaga gcgcgaaggg cagtacgagc ttgccgccgc
     2641 ggccgtgggg gagcttgccg tccatgatga cgatgcggcg gccgggatgc aggtgcttcc
     2701 acgcatggcg cagcacagcg aggtggtgcg gcatcgtgtt gtagcagagg ccgaacatga
     2761 tgccgtcaag cggctcgcag gggataaatt cgaggccgtc gcactgcgtc agctcgacgt
     2821 tctcccactg ctcgcgccgg cacagcgctc gcgcccggcg cagcatcccg ctcgagagat
     2881 cgacgccata taccttgccc gcgggcccga ccgcctcgcg caggaacggg agattgcgcc
     2941 ccgtgccgca tccgatttcg agcacgcggt cgcccggctt gagccggaga cccatggtcg
     3001 cgcgtcggcg caggtgcgac gggaggaaca acaggcggtc gaataggccg atcaggccgg
     3061 caatacgatc ataacgctgt gcgatgaacg cacgttcgca atccacccac tgggaggtca
     3121 cgtgcttcgc cccgacacgc gcgcggaccg ttgttgtctg ctgccgcccg cttggcttga
     3181 gatgttccca tccgtcgacg atgttttcgt ccgagacgtc gccatcgtcg aagcgcaaac
     3241 gtgaggcggc aggatgggca aggataggtg gcaaatagtc gcattatttt accgctgccg
     3301 cggtgcgacg ccgcgccgtc gagttatccc ttcgcacaaa gcgcgcgccc aactgcgcgc
     3361 gtgcgcaatg caaaaagatc caatttaggt gtaagcggcg cttactcggt cgcagccagc
     3421 tttgtctgcc gcgcgttgct ctcgcgccat aacaggaaga ggccggacgc gaccacgacg
     3481 gcggatccga tcaccagcga gatggtcggc aagtcgcccc agatcgcgaa cccaaggatg
     3541 ctggcccata cgagcgagag gtagaaaaac ggcgccaccg ccgacgccgg cgccaggtgc
     3601 agcgcgcgcg tccaccaata ttgccccacg gcattggaca cgccgttgaa cacgatccat
     3661 gccgtatcgg ccggggtggg ccaggcccac cccaagggca acagcagcgc gaagaacgcc
     3721 gtgagcaggg caagttgata gaggatcagc gtttccgccg attcggttgc ggtcattccc
     3781 cgcacgccga cggtgaccga gccgtagagc acggcgttcg ccagcgcgaa cagcgcgccg
     3841 atctggaacg tgccggcgtc gggattggcg acgatgagca ctccgcaaaa gcccaccagc
     3901 agcgctagcc aacgcgccag ccccaccgcc tccttgagca ccagcgccga gatcagcgtc
     3961 gcgaacaacg gagaagagaa gttgatggcg atggcgccgg cgagcggcat caggctgaac
     4021 gcgatcagca gaaacgtctg cgagcagcct tgcgataccg agcgcagcgc gtggtggcgc
     4081 aggcgttgcg tgcgaaaaac ggcgagcccg gtctgcggta tgatgaagag cgcgcaggtg
     4141 aggagcgcga tggcggtgcg ggtaaacaga acttcgccga tagaataact cgccaccaac
     4201 catttggaca ccgcgctgga aacggcgaac acgacagtgg cgccgaccat gtaaagaatg
     4261 ccgagcggga catgctcccg gcgcgcggtc ttcgcgggcg cgatcacgcc ggtcgcttcg
     4321 ctcgtcggga tcggctcttt gccggcagcg gatcgactca agttggccgc gcctcgcctt
     4381 cacgcgcgat ttcgccagcg ctcggtcgag caatacgcgc tgttcaactt tatgacatgg
     4441 caatggttgg ttcgtcattc ccggacggca tgacgggtga gccaatttaa tccttgcaat
     4501 gacgcaggga ttctgcgtcc cggcgccacg ccgtgcggca cggacactgc agtgctcttt
     4561 cgcgccatag tttatcg
//
LOCUS       DATCWM010000503         2282 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_73999, whole genome shotgun sequence.
ACCESSION   DATCWM010000503 DATCWM010000000
VERSION     DATCWM010000503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2282
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73999"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..603
                     /locus_tag="VIQ50_09850"
     CDS             <1..603
                     /locus_tag="VIQ50_09850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360728.1"
                     /translation="IEPGSPQTAATPAPGTQPGVTAAQKVVLYEEDPADPNGKRFVGS
                     AIWRTETITPGPGQPPELAIRADVEVPERKLAMTWSLRRNTDKGLPATHTVEIMFKLP
                     ADFPAGGISNVPGILMKQAEQTRGVPLAGLAVKVTPGFYLIGLSNADADKDRNIQLLK
                     ERSWFDIPVVYNNNRRAILALEKGTPGEQVFADAFKAWKQ"
     gene            complement(744..1652)
                     /gene="rpoH"
                     /locus_tag="VIQ50_09855"
     CDS             complement(744..1652)
                     /gene="rpoH"
                     /locus_tag="VIQ50_09855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020187734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HEY9360729.1"
                     /translation="MARAAALPILTAESGLTRYLEEIRRFPMLEPQDEFMLAKRWREH
                     GDRDAAHKLVTSHLRLVAKIAMGYRGYGLPISEVISEGNVGLMQAVKRFEPDKGFRLA
                     TYAMWWIKAAIQEYILRSWSLVKMGTTANQKKLFFNLRKAKSKISALEEGDLRPDQVK
                     LIAKRLGVTEQDVVDMNRRLGGDVSLNAPIRDDGDSGEWQDWLVDEVSDQETRLAEDE
                     ESDNRKKALGEALSVLNERERRIFEARRLADDPVTLEDLAAEFGVSRERVRQIEVRAF
                     EKVQRAVKNRLAAMESRPNAPALHAH"
     gene            complement(1863..>2282)
                     /locus_tag="VIQ50_09860"
     CDS             complement(1863..>2282)
                     /locus_tag="VIQ50_09860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HEY9360730.1"
                     /translation="PIGRHPRAREKMAVRADGRSAVTHWEVLEHYRGRDGTPVASLIA
                     CRLETGRTHQIRVHLASIGHPLLGDETYGSGFKTKANQLSSEAKAALGALGRQALHAY
                     LLVVEHPSQGTNLEFRSELPDDFLRLRHSLGAQGART"
BASE COUNT          401 a          741 c          721 g          419 t
ORIGIN      
        1 atcgagccgg gcagtccgca gaccgcggcg acgccggcgc cgggaacgca acccggtgtc
       61 acggccgcgc agaaggtggt cctctatgag gaggatcccg ccgatcccaa cggaaagcgc
      121 ttcgtcggct cggccatctg gcggaccgag accatcacgc cgggtcccgg acagccgccc
      181 gagcttgcca ttcgcgcgga cgtcgaggtg ccggaacgca agctcgccat gacctggtcg
      241 ctgcgccgca acaccgataa ggggcttccc gctacccaca cggtcgaaat catgttcaag
      301 ctgccggccg acttccccgc tggcggcatc tccaatgttc ccggcatcct gatgaagcaa
      361 gccgagcaga cgcgcggggt cccgcttgcg ggcctcgcgg tcaaggtcac gcccggcttc
      421 tatctgatcg gtctgtcgaa cgcggacgcc gacaaggacc gcaatattca attgctcaag
      481 gaacgaagct ggttcgacat cccggtggtt tacaacaaca accgccgcgc catcttggcc
      541 ttggagaaag gcacgccagg cgaacaggtc tttgccgacg cgttcaaggc gtggaagcag
      601 tagccgcgca gtcattgccg ggcttgacgc ggcaatccat cacctcgcgt aagacgcttt
      661 tccgatggat gcccgggtcg taagcgcgcc tacgcgcgtc ttcggcgcgc ttctgcccga
      721 gcatgacgca gaagagcgat gtcttaatgc gcgtgcagcg cgggcgcgtt gggacggctt
      781 tccatcgccg cgaggcggtt cttcaccgcc cgctgcactt tctcgaaggc ccgcacctcg
      841 atttggcgca cgcgctcgcg ggagacgccg aactcggccg ccagatcctc gagcgtgacc
      901 ggatcatcgg cgagccggcg tgcctcgaag atgcgccgct cgcgctcatt gagcaccgag
      961 agtgcttcgc cgagcgcctt tttgcggttg tccgattcct cgtcctccgc caaccgcgtc
     1021 tcttgatcgg agacctcgtc gacgagccaa tcctgccatt cgccggaatc gccatcgtcg
     1081 cggatgggag cgttgaggga cacgtcgccg ccgagacggc ggttcatgtc gacgacatcc
     1141 tgctcggtca cgcccagccg cttggcgatg agcttgacct ggtcgggacg taggtcgccc
     1201 tcttcgagcg ccgagatctt gctcttggcc ttgcgcaggt tgaagaacag cttcttctga
     1261 ttggcggtgg tgcccatctt caccagcgac caggagcgca ggatgtattc ttggatcgcc
     1321 gccttgatcc accacatggc gtaggtggcg aggcggaagc ctttatccgg ctcgaagcgc
     1381 ttgaccgcct gcatcaggcc gacattgcct tccgaaatca cctcggagat cggcaggcca
     1441 tagccgcggt aacccatcgc gatcttggcg accaggcgca aatggctggt gacgagtttg
     1501 tgcgccgcgt cgcggtcgcc atgctcgcgc cagcgcttgg ccagcatgaa ttcgtcctgc
     1561 ggttccaaca tcgggaaccg ccggatctcc tcaagatagc gggtaaggcc ggattcggcc
     1621 gtcagaattg gcaaagctgc agcacgggcc attatagcgc cctccaaagt ttgcccccgg
     1681 tgaccggcgg gcggagcaca ctgccgctcc ccgagccgac ggtgccaatt ttgctgcgac
     1741 cgcgaaggtt gatcgcgggc gcaacagtac aggaccaggg ggtacgaaca aagtgaactc
     1801 ggcgtcacgt cgccgtgacc ccgtcgtgta cacctaagcc cttgcttgga cttgatcttt
     1861 gctcaagtcc ttgcgccctg cgcaccgagg ctgtggcgta aacgcaagaa atcatccggc
     1921 agttccgagc ggaactccag attcgtgccc tgcgatgggt gttcgacaac caacaaatag
     1981 gcatggagtg cctgtctgcc aagggctccc agcgcggctt tggcttcgct ggaaagctga
     2041 ttcgccttgg tcttgaagcc gctgccatag gtctcgtcgc cgagaagggg gtggccgatc
     2101 gacgcgaggt ggacgcgtat ctggtgggtg cgtccggttt ccagccggca ggcgataagg
     2161 ctcgccaccg gcgttccatc gcggccgcga tagtgttcga gcacctccca atgggtgacc
     2221 gccgagcggc cgtcggcgcg cacggccatc ttctcgcgcg cgcgaggatg gcggccgatt
     2281 gg
//
LOCUS       DATCWM010000504         8303 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_160197, whole genome shotgun sequence.
ACCESSION   DATCWM010000504 DATCWM010000000
VERSION     DATCWM010000504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8303)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8303
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160197"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(200..964)
                     /locus_tag="VIQ50_09865"
     CDS             complement(200..964)
                     /locus_tag="VIQ50_09865"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY9360731.1"
                     /translation="MAALQKVAVVTGAGTGIGKAVALALMKEGYAAVFAGRRKDKLEE
                     AASEGKASGAKSLVVPTDVSDPAAIKALFAKTKDTFGRLDVLFNNAGIGAPAVPLEDL
                     PYETWKQVVDTNLTGMFLCTQEAIRIMKAQDPRGGRIINNGSISAHAPRPRSVAYTAT
                     KHAVTGLTKSTALDCRAYNICCGQIDIGNAATPLTERMVQGQGVMQADGRMAMEARMN
                     ADDVGRAVVYMANLPLDTNVLFMTVMANLMPFVGRG"
     gene            complement(1045..1791)
                     /locus_tag="VIQ50_09870"
     CDS             complement(1045..1791)
                     /locus_tag="VIQ50_09870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proteasome-type protease"
                     /protein_id="HEY9360732.1"
                     /translation="MTYCCGILVRDGLVMFADTRTNAGVDNIATFRKLHIFTRPGQRI
                     MAIASAGNLSISQSVVSILREGWENPETGETETLINAPTMFQAAQRVGHIVRQLYDIE
                     GKALEASDVKFDVSFLLGGQIKGERPRLFMLYSAGNFIECTQDTPYLQIGEHKYGKPV
                     LDRAITYDIDLYDALKVGLVSVDSTMRSNLSVGLPIDLLIARRDVCDAELNFRIEPGE
                     PYFHDLRERWSAALRAAHAGIPRPPYKNIR"
     gene            complement(1860..2084)
                     /locus_tag="VIQ50_09875"
                     /pseudo
     CDS             complement(1860..2084)
                     /locus_tag="VIQ50_09875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021271.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
     gene            complement(2142..3083)
                     /locus_tag="VIQ50_09880"
     CDS             complement(2142..3083)
                     /locus_tag="VIQ50_09880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018647008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-E domain-containing protein"
                     /protein_id="HEY9360733.1"
                     /translation="MLSRTADNLFWLARYVERAEYLARILEVTQRLTTLPLAYVGSSN
                     EWESAVATAGCAHAFAAAYPEANEEAVTDFLCFSTANPSSIRNCFEIARTNARAVRTA
                     LTVEMWDAINGTWLELKRFGNGSTSREEFMRFLRWVQESSLRFDGSAYRTMLRNDAYW
                     FSRLGVYMERADNTARILDVKYHMLLPAHERVGGPLDYFQWSAILRSVSALTAYHWVY
                     RESVKPWLIADLLILRDEMPRSLASCYENLVVYLDQIARAYGSQGPAQRHARAVRAQL
                     ENSRMDEIFQQGMHEFISEFIDNNNRLGAAIAEQYLM"
     gene            complement(3150..4568)
                     /locus_tag="VIQ50_09885"
     CDS             complement(3150..4568)
                     /locus_tag="VIQ50_09885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="circularly permuted type 2 ATP-grasp protein"
                     /protein_id="HEY9360734.1"
                     /translation="MLAAFDEMKGAEGTLRPAYNELFRWLSEVPSDVLDYRRREAEVL
                     FRRIGITFAVYGEADAQERLIPFDVLPRILAAAEWDILRAGLEQRVKAINLYLRDVYT
                     RREILKAGVIPEELVFQNPVFRPEMNGQKVPHDIYVHIGGIDIVRVDAESFYVLEDNA
                     RTPSGVSYMLENREIMLRLFPELFARHRVAPVENYPDELLATLKSVAPMTASADPTVV
                     LLTPGIYNSAYYEHSFLADKLGVELVEGRDLFVKDDLVFMRTTQGPKRVDVIYRRIDD
                     DFLDPLAFRADSVLGVPGLMSVYQAGNVTLANAVGTGIADDKAVYSYMPAIVKFYLGE
                     EPILKNVPTWRCREAEHLTYVLDNLEQLVVKEVHGSGGYGMLIGPKADKATIATFRAK
                     LKYNPKNFVAQPTLALSTCPTCVEEGVAPRHVDLRPFVLTGRDRIRIVPGGLTRVALK
                     KGSLVVNSSQGGGTKDTWVLDR"
     gene            complement(4902..5534)
                     /locus_tag="VIQ50_09890"
     CDS             complement(4902..5534)
                     /locus_tag="VIQ50_09890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008196659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEY9360735.1"
                     /translation="MIDLYTWTTPNGRKASILLEELALPYAAHPVDITKDEQFKPEYL
                     KISPNNRIPAIVDRDTGISLMESAAIMIYLADKTGKLLPKSGEPRYRALEWLMWQMGG
                     PGPMFGQVHHFVKYNKGKAPYAEERFLKEAQRLYGVLDRRLAGREFVADDYSIADIAI
                     WPWVSRYEWQTIDLNEYPNVKRWYTTIAKRPAVQKGYKVPKDVGEVPIPA"
     gene            complement(5853..6953)
                     /locus_tag="VIQ50_09895"
     CDS             complement(5853..6953)
                     /locus_tag="VIQ50_09895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEY9360736.1"
                     /translation="MGDRLSKIVIAALLVVLAVYVAQPYVDRWLFSASTPRTVEPRGS
                     LSDIERTSIELFEHASPSVVQVVGRAGAVELPQAEAENGPAQSGSGFVWDAAGHIVSN
                     NHVVEGTSSLAVRFASGQVLRAHIVGTAPNYDLAVIRVDNPRSLPPPIAIGTSDDLKV
                     GQWVFAIGNPFGLDQTLTTGIISALKRRLPTSGGREITNVIQTDAAINPGNSGGPLLD
                     SAGRVIGVTTAILSPSGTNAGIGFAIPIDSVNRVVPELIRRGSVPTPGIGIVAASEAA
                     ATRAGAQGVVIVQTAPGSSAERAGLRGIDPRSRKLGDIIVAVNGKSVRGLADLIQELE
                     RVGVGKRVTLTVQRDGRDVPVEVEVMDIGHRG"
     gene            complement(7056..>8303)
                     /locus_tag="VIQ50_09900"
     CDS             complement(7056..>8303)
                     /locus_tag="VIQ50_09900"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY9360737.1"
                     /translation="KAAAAIAADTIAKFLFTSGSTGLPKGVINTHGMLTANQQQLAQV
                     WPFLEEGAVVLLDWLPWNHTFGGNHNFNLVLRHAGTLFIDGGKPVPGLIDETARNLAE
                     VSPTIYFNVPAGYAALLPFLERDEALARAFFNKLRLIFYAGAALPQDLWERLEMVSLR
                     AIGERVPMTSSWGTTETSPCSTAAHFLIERAGPVGVPIPGVELKLVPVADKLEVRVRG
                     PNVTPGYWKRPDLTRAAFDEEGFYMPGDAVRFADPADPRQGIVFDGRLAEDFKLATGT
                     WVAVGVLRVGALAAASPALQDAIIAGENRKSLGMLAWLNAAGCRKLVGCDAPLPELAR
                     HPGLREHVREAIARWNAEHSGSSQKIARVLLLPDAPSIDANEITDKGYINQRLALERR
                     KAEVERLFASTPDADVLVVPIAP"
BASE COUNT         1458 a         2606 c         2726 g         1513 t
ORIGIN      
        1 cgcggctggc gagcccatgc aacattttcg ccaaggcgat cggcaacgtg aaggcgctgg
       61 cgaaggtgaa ggcgggtgcg aaagtcaacg tgaccctgat cgactagcgc ggcgcaacgc
      121 ccgcgcaagc gtaacgcatc cgatatcgcc cgctccgccg aggcgactgc gccgcaaaat
      181 tgcttcgagc gccggtgcat catccccgcc cgacgaacgg catcaggttc gccattacgg
      241 tcatgaacag gacgttggtg tcgagcggga ggttggccat gtacaccacg gcccggccga
      301 cgtcgtcggc gttcatgcgt gcttccatcg ccatgcggcc gtccgcctgc atcacgcctt
      361 ggccctgtac catgcgttcg gtcaacgggg tcgccgcgtt gccgatatcg atctgtccac
      421 agcagatgtt gtaggcgcgg caatcgagcg cggtcgattt ggtcagcccg gttaccgcgt
      481 gcttggtcgc ggtataggcg accgaacgcg ggcgcggggc gtgggcggag atcgagccgt
      541 tgttgatgat gcggccgccg cgcgggtcct gcgccttcat gatcctgatc gcttcctgcg
      601 tgcacagaaa catgccggtg agattggtgt cgaccacctg cttccaggtc tcgtaaggca
      661 ggtcctcgag cggaaccgcc ggggcgccga tgccggcatt gttgaagagg acgtcgagcc
      721 ggccgaaggt gtccttggtt ttggcgaaca gcgccttgat cgccgccgga tcgctcacgt
      781 cggtgggaac gacgaggctt tttgcgccgc tcgccttgcc ctcgctcgcg gcctcctcca
      841 gcttgtcctt gcgccgtccc gcgaatacgg cggcgtagcc ctccttcatc agcgccagcg
      901 caacggcctt gccgatgccg gtcccggcgc cggtgacaac agcgactttt tgcaacgcag
      961 ccatcagggt tcctcctcgc ggctcaaatt attggtcgaa ctgcagacgc ttgcgatgcc
     1021 cccagccggg ttcgcgctgc gccttcagcg gatgttcttg tagggcggac gcggaattcc
     1081 ggcgtgagcg gcccgcagcg ccgccgacca gcgttcgcgc aggtcgtgga aatacggctc
     1141 ccccggctcg atccgaaagt tgagttcggc gtcgcagacg tcgcggcgcg caatcagaag
     1201 gtcgatgggc aggccgacgc tgagattcga gcgcatggtg gaatcgaccg agaccagccc
     1261 gaccttgagc gcatcgtaga ggtcgatgtc gtaggtgatg gcgcgatcga gcaccggctt
     1321 gccgtatttg tgctcgccga tctgcagata gggcgtgtcc tgggtacatt cgatgaaatt
     1381 gccggcggag tagagcatga acagccgcgg ccgctcgccc ttgatctgac ctcccagcag
     1441 gaacgagacg tcgaatttca cgtccgaggc ttcgagcgcc ttgccctcga tgtcgtaaag
     1501 ctgccggacg atatgaccga cgcgctgcgc cgcctgaaac atggtgggcg cgttgatcag
     1561 cgtctcggtc tcgccggtct cgggattttc ccagccctcc cgcaggatgc tgaccaccga
     1621 ctggctgatg gagaggttgc cggccgaggc gatcgccatg atgcgctgcc caggacgggt
     1681 gaagatgtgg agcttgcgga aggtcgcgat gttgtcgacg ccagcgttgg tgcgggtgtc
     1741 ggcgaacatc acgagaccgt cgcgcaccaa gatgccgcag caataggtca tgacgttcga
     1801 acggctccct gcccagcggc cctatatacc gacccgggcg gcaagcccgc aatgcttcct
     1861 caattctgga tctgctgcgc cgcctgctcg acgcggacct tgaccgagag cgcctcgccg
     1921 gcgccgccgt aacgcgtcct gcgcaaggac gccgcgctca attcatcgag cccgacggcg
     1981 acccgcacat gggcgtcggt ggcgcaaagt ccgttggccg catcgaacgc gacccagccg
     2041 agcgtgggca cgaaagcttc cgcccatgcg tggccggcct cttgctcgct cgcctcgttg
     2101 gccgagtccg gttgcggccg tcgtgcggcc cagcgcccgc tctacatcag atattgttcg
     2161 gcgatggcgg caccgaggcg gttgttgttg tcgatgaatt cgctgatgaa ttcatgcatt
     2221 ccctgctgaa aaatctcgtc catgcggctg ttctcgagct gggcgcgcac tgcgcgcgca
     2281 tggcgctggg ctggtccctg gctgccatag gcgcgcgcga tctgatccaa atagaccacg
     2341 agattctcgt agcagctcgc cagcgaccgc ggcatttcat cgcgcaagat caagaggtcg
     2401 gcgatcagcc aaggcttcac gctctcgcga tagacccagt ggtaggcggt cagcgccgaa
     2461 accgagcgta gaatcgccga ccactggaaa tagtcgagcg ggccgcccac gcgctcatgc
     2521 gccggcagca gcatgtggta cttcacgtcg aggatgcgtg ccgtattgtc ggcgcgctcc
     2581 atgtagacgc cgagacggga gaaccagtag gcgtcgttgc gcagcatggt ccggtaggcg
     2641 gagccgtcga agcgtaacga ggactcctgc acccaacgca aaaaccgcat gaattcctcg
     2701 cgcgaggtcg agccgttgcc gaagcgcttg agctcgagcc aagtgccgtt gatggcgtcc
     2761 cacatttcca cggtgagtgc ggtgcgcacg gcgcgtgcgt tggtacgcgc aatttcgaag
     2821 cagttgcgga tcgaggacgg gtttgccgtt gaaaagcaga gaaaatccgt gaccgcctcc
     2881 tcgttcgcct ccggataggc ggcggcgaat gcgtgggcac agccggcggt cgcaacggcc
     2941 gattcccatt cgttggagga gccgacatag gcgagcggga gcgtcgtgag gcgctgcgtc
     3001 acctcgagga tgcgcgcgag atactccgcg cgttccacgt aacgcgcgag ccaaaagaga
     3061 ttgtcggcgg tgcgcgacag catctttcta tccgcaacgg cgcgccgtgc gcggcggcag
     3121 ggacatccgc atcgatcgtg cgttccgcct catcgatcca agacccaggt atccttggtc
     3181 ccgccgccct ggctggaatt gaccacgagt gatcctttct tcagcgccac gcgcgtgagg
     3241 ccgcccggca cgatgcggat gcgatcgcgc ccggtcagca cgaatgggcg cagatcgacg
     3301 tggcggggcg ccactccttc ctcgacgcaa gtggggcagg tggacaacgc gagcgtcggc
     3361 tgtgcgacga aatttttcgg attgtatttg agcttggcgc ggaacgtcgc gatcgtcgcc
     3421 ttgtcggcct ttggcccgat caacatgccg tagccgccgg aaccgtgcac ctccttgacc
     3481 acgagctgct cgagattgtc gagtacgtag gtgaggtgtt cggcttcacg gcagcgccag
     3541 gtcggcacgt ttttgaggat cggctcctcg cccaggtaga acttcacgat cgccggcatg
     3601 tagctgtaga ccgccttgtc gtcggcgatc ccggtcccga ccgcgttcgc cagcgtcacg
     3661 ttcccggcct ggtagaccga catcagtccc ggcactccga gcacggagtc cgcacggaag
     3721 gccagcggat cgagaaaatc gtcgtcgatg cggcgataga tcacgtcgac gcgtttgggt
     3781 ccttgcgtgg tccgcatgaa cacgaggtcg tccttcacga acaagtcgcg gccctcgacc
     3841 agctcgacgc cgagcttgtc ggcaagaaac gagtgctcgt agtaggccga attgtagatg
     3901 cccggcgtga gcagcacgac tgtcgggtcg gcactggcgg tcataggcgc cacggacttc
     3961 aaggttgcca gcagctcgtc cggatagttc tccaccggag ccactcgatg gcgggcgaag
     4021 agttccggga acaggcgcag catgatctcc cggttctcca gcatgtagga gacgccggag
     4081 ggcgtgcgcg cgttgtcctc gagcacgtag aagctctcgg cgtcgacgcg aacgatatcg
     4141 atgccgccga tatgaacgta gatgtcgtgc ggcacctttt ggccgttcat ttccggccga
     4201 aacaccggat tttggaacac tagttcttcc ggtattacgc cggccttgag aatctcgcgt
     4261 cgggtgtaga cgtcgcggag gtagaggttg atggccttga cgcgctgttc gagtcccgcg
     4321 cgcaggatgt cccactcggc ggcggcaagg atgcgcggca gcacgtcgaa cgggatgagc
     4381 cgctcctgcg cgtccgcttc cccgtacacc gcaaacgtga tgccgatgcg gcggaagagc
     4441 acctccgcct cgcgccggcg gtagtccagc acatcggagg gtacctcgga gagccagcga
     4501 aacagctcgt tgtaagcggg ccgcagggtg ccctcggcgc ctttcatctc gtcgaacgcg
     4561 gccaacatgg ctgttccctc gctcgtgtgc gctcgtcgcc ggagccctgc gcgacctgat
     4621 cctaactgca agccgcgcgc caaccaaagg gggcatccgc tgagcacgga ccaccccatg
     4681 tgcccagctt ttgggcggcg ctgatgaagg agtgacagtg tgggtcgcgc ggcgtctcgc
     4741 tggtggttat ggcgccgaca cctgctcgag gcgttcgacc ccgggccgcg ggctcgcgta
     4801 aaaccggcta agcaagctca tgcgcctgcg atgtccgctc cgatgcaggg gagggggcac
     4861 gatccgccgc gcgcttgatc gtgccgatac tcgagggatc attacgccgg gatcggaacc
     4921 tcgccgacgt ccttcggtac tttgtagcct ttctgcacgg ccggacgctt ggcgatggtc
     4981 gtgtaccagc gcttcacgtt ggggtactcg ttgaggtcta tcgtctgcca ctcgtagcgc
     5041 gacacccacg gccagatggc gatatcggcg atcgagtaat catcggcgac gaattcgcgc
     5101 ccggcgagcc tgcgatcgag cacgccgtag agccgctgcg cctccttgag gaagcgctct
     5161 tcggcgtagg gcgccttgcc tttgttgtac ttcacgaaat ggtggacttg gccgaacatc
     5221 ggcccaggcc ctcccatctg ccacatcaac cactcgagcg cgcggtagcg cggctcgccc
     5281 gatttcggca gcagctttcc ggtcttgtcg gcgagataga tcatgatcgc cgccgactcc
     5341 atcaggctga tgccggtgtc gcggtcgacg atggcgggaa tgcgattgtt cgggctgatc
     5401 ttcaagtact cgggcttgaa ctgctcatct ttggtgatgt cgacgggatg tgcagcatag
     5461 ggcagagcca actcctcgag caggatggag gctttgcggc cattgggcgt cgtccaggta
     5521 tagagatcga tcacggtttt ccttcctatg gtcgcgaatg ggcgtgaatg cggtttaaca
     5581 atttcgcatg ctagtgtccc gattccgaag ttcgcatcat tgtgctgcag cctcgtctgc
     5641 gaatttcgga atcgaaggac gctagcaact tattgatcta gtgtggcttt ggttcagaag
     5701 tccgcaattc ggtctcgctg caagaatgat gcggacttct gaaccgccac actagccggc
     5761 cgagccgagc acgcgtggta gctggaaatc gccagcgcgt cgatgcgaaa atcgctgcgc
     5821 ggaccgacac ggcggcggca ggattggcgc agtcatcccc tgtgcccgat atccatcacc
     5881 tcgacctcga ccgggacgtc gcggccgtcg cgttgcacgg tcagcgtcac ccgttttccc
     5941 accccgacgc gctcgagctc ctggatcaag tccgcgagcc cgcgcaccga cttgccgttc
     6001 accgccacga tgatgtcgcc tagctttctg ctgcgcgggt cgatgccgcg caacccggcg
     6061 cgttcggcgg aggagcccgg ggcggtttgc acgatgacga cgccttgcgc gccggcgcgc
     6121 gtcgccgcgg cttcgctggc ggcaacgatg ccgatccccg gcgtcggcac cgagccgcgg
     6181 cgaatgagct cgggcacgac gcggttgacg gaatcgatcg gtatggcgaa gccgattcct
     6241 gcgttcgttc cggagggaga aagaatggcg gtggtgacgc cgatcacgcg ccccgccgag
     6301 tcgagcaacg ggccgccgga attgccagga ttgatggctg cgtcggtctg gatcacgttg
     6361 gtgatttcgc ggcccccgct cgtgggcagg cggcgcttga gcgcgctgat gatcccggtg
     6421 gtcaaggttt gatccagccc gaacggattg ccgatcgcga acacccattg tccgaccttg
     6481 agatcgtcgg acgtgccgat cgcaatcggc gggggcaacg atcgcgggtt gtccacgcga
     6541 atgactgcca gatcgtaatt gggcgcggtc ccgacgatat gggcgcgcaa tacctggccg
     6601 gaggcgaagc gcacggcgag gctgctggtg ccttccacca catgattgtt gctgacgata
     6661 tgaccggctg catcccagac gaagcccgag cccgattgcg ccggaccgtt ctcggcttcc
     6721 gcttggggaa gttcgaccgc gccggcgcgc cccaccacct gcacgacgga cggagatgcg
     6781 tgctcgaaga gctcgatcga cgtgcgctcg atatcggaca agctgccgcg cggttcgacc
     6841 gtgcgcggcg tcgaggctga gaacaaccag cgatcgacat aaggttgcgc cacgtacacg
     6901 gccaggacga ccaggagcgc ggcaatcaca atcttcgaga ggcggtcgcc catcgcaggc
     6961 ctccggcatc ggtctatcga aaaagaacac gcaacacgaa ttggtttcgc acggcacgac
     7021 gagatccgac actctcgacc ccgtccgtct aggcgtcatg gagcgatcgg cacgaccagt
     7081 acgtcggcat cgggcgtcga cgcgaatagc cgttcgacct cggccttgcg ccgttcgagc
     7141 gcgaggcgct ggttgatata gcctttgtcg gtgatctcat tggcgtcgat ggaaggagca
     7201 tcgggcaaga gcagcacgcg cgcgatcttt tgcgacgagc ccgaatgctc ggcgttccag
     7261 cgggcgatgg cctcgcggac gtgctcgcgt aggccgggat gacgggcaag ctccgggagc
     7321 ggcgcatcgc agccgacgag cttgcggcaa ccggcagcgt tgagccaagc cagcatcccg
     7381 agcgacttgc ggttctcgcc ggcgatgatg gcatcttgca gcgcagggga ggccgcggcg
     7441 agcgcgccga cgcgcagcac gccgaccgcg acccaggtgc cggtggcaag cttgaaatct
     7501 tccgccaggc gcccgtcgaa gacgatgcct tggcgcggat cggccgggtc ggcaaagcgc
     7561 acggcatcgc ccggcatgta gaagccttcc tcgtcgaacg ccgcacgtgt gagatcgggg
     7621 cgtttccagt agcccggcgt cacgttcggg ccgcgcacgc ggacttcgag tttgtcggcg
     7681 accggaacga gcttgagctc gaccccgggg atcggcacgc cgaccgggcc ggcgcgctcg
     7741 atcaagaaat gcgcggcagt cgagcacggc gacgtctcgg tggtgcccca cgatgaggtc
     7801 atgggcaccc gctcgccgat cgcacgcagc gacaccattt cgagccgctc ccacagatct
     7861 tgcggcagcg cggcgccggc atagaagatc aggcgcagct tgttgaaaaa cgcccgcgcc
     7921 aacgcctcgt cgcgctcgag aaacggcaac agcgctgcat agcccgccgg cacgttgaaa
     7981 tagatcgtgg gcgacacctc ggcgagattg cgcgccgttt cgtcaatcag tcccggtacc
     8041 ggcttgccgc cgtcgatgaa cagcgtgccg gcatgacgca ggacgagatt gaaattgtgg
     8101 ttgccgccga aggtgtggtt ccacggcagc caatcgagca gcacgaccgc tccctcctcc
     8161 aggaacggcc aaacctgcgc gagctgctgc tggtttgccg taagcatgcc gtgggtgttg
     8221 atcacgccct tgggcaggcc cgtggaaccg gaagtaaaca ggaatttggc aatcgtatcg
     8281 gcggcaatcg ccgcggcggc ttt
//
LOCUS       DATCWM010000505         2601 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_467973, whole genome shotgun sequence.
ACCESSION   DATCWM010000505 DATCWM010000000
VERSION     DATCWM010000505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2601
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_467973"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            203..1657
                     /gene="gatB"
                     /locus_tag="VIQ50_09905"
     CDS             203..1657
                     /gene="gatB"
                     /locus_tag="VIQ50_09905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HEY9360738.1"
                     /translation="MKSKLIKSTSGDWEVVIGMEVHAQVTSRSKLFSGASTAFGGEPN
                     SHVSLVDAAMPGMLPVINEECIKQAVRTGLGLKARINLKSVFDRKNYFYPDLPPGYQI
                     SQYKSPLVGEGEVIVDLPDGETVTVGIERLHLEQDAGKSLHDRHSSMSFVDLNRAGVA
                     LMEIVSKPDLRSSEDAKAYVAKLRTIVRYLGTCDGDMEKGNLRADVNVSVRKPGAPLG
                     TRCEIKNVNSIRFIGQAIKHEARRQIEILEEGGHIEQETRLFDPDKGETRSMRNKEEA
                     HDYRYFPDPDLMPLELTAAYVEDLRLHLPELPDEKKGRFMRDYGLSGYDAGVLVAERQ
                     TADFFEAVAKGRDAKLATNWVINDLAGRLNKEGRDIAASPVSAWQLGAILDLISAGTI
                     SGKIAKDLFEICWNEGGDPHAIVEARGMKQVTDLSAIERVVDDIIAKNPDKVEQAKTK
                     PALIGWFVGQVMKASGGKANPQAVNELLKTKLGI"
     gene            2090..2329
                     /locus_tag="VIQ50_09910"
     CDS             2090..2329
                     /locus_tag="VIQ50_09910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360739.1"
                     /translation="MPDAAKTLVFLSRCSNPNAVFAIPAGTDDIATHSRLGGQHGEEA
                     KEDGEGSEKGRKKDQAPEEEVTARRASVFDFERRR"
BASE COUNT          546 a          771 c          834 g          450 t
ORIGIN      
        1 atcaactccg atcgttccga ctaggccaac gcccgcgccg gatcgaggtt cctgcgggga
       61 tgggcgcatg cggaactgcg gcagacttgt ggcgcatggt tggagcgttt aactaaagcc
      121 ggaaggggtg cctgacacgg atcatgcggg caaatgtcgc gggcgcggcg tccgcggcga
      181 tgcgtggata ggaagctcgc cgatgaagtc gaaactcatc aaaagcacca gcggcgattg
      241 ggaggtggtc atcggcatgg aggtccatgc ccaggtgacc tcgcgctcga aactcttttc
      301 cggcgcgtcg accgcgttcg gcggcgagcc caattcccac gtgtcgctgg tcgacgcggc
      361 gatgcccggc atgctgccgg tgatcaacga ggagtgcatc aagcaggcgg tccgcaccgg
      421 ccttgggctc aaggcgcgga tcaatctgaa atcggtgttc gaccgcaaga actatttcta
      481 ccccgatctg ccgccgggtt atcaaatcag ccaatacaag tcgccactcg tgggcgaggg
      541 cgaggtcatc gtcgatttgc ccgacggcga gaccgtgacc gtcgggatcg agcggctgca
      601 tctcgaacaa gacgccggaa aatcgctgca cgaccggcat tccagcatgt ccttcgtcga
      661 cctcaaccgc gccggcgtcg cgctcatgga gatcgtgtcg aaaccggatc tgcgctcgtc
      721 cgaggacgcc aaggcctatg tcgcgaagct gcgcaccatc gtgcgctatc tcggtacctg
      781 cgacggcgac atggaaaagg gaaacctgcg cgccgacgtg aacgtgtcgg tgcgcaagcc
      841 gggcgcgccg ctcggtacgc gctgcgagat caagaacgtc aactcgatcc gcttcatcgg
      901 ccaagcgatc aaacacgagg cgcgccgcca gatcgagatt ctggaggagg gcggtcacat
      961 cgagcaggag acccggctgt tcgaccccga caagggcgag acacgctcga tgcgcaacaa
     1021 ggaggaggcg cacgactacc gctactttcc cgatcccgat ctcatgccgc tcgagctcac
     1081 ggcggcttac gtcgaggatc tcaggctgca cctcccggaa ctgccggacg agaagaaggg
     1141 gcgcttcatg cgcgactacg gtctctccgg ctacgacgcc ggcgttctcg tcgccgaacg
     1201 gcagacggcc gacttcttcg aggcggtcgc gaagggccgc gatgccaagc tcgcaaccaa
     1261 ctgggtcatc aacgacctcg cgggccggct caacaaggag ggtagagaca tcgccgcttc
     1321 gccggtatcg gcgtggcaac tcggtgcgat cctcgacctg atctcggccg gcacgatttc
     1381 cggcaagatc gccaaggatt tattcgagat ctgctggaac gagggaggcg atccgcacgc
     1441 gatcgtggag gcgcgcggca tgaagcaggt gacagacctc tccgcgatcg agagggtggt
     1501 cgatgacatc atcgccaaaa atccggacaa ggtggagcag gcgaagacga agccggcgct
     1561 gatcggctgg ttcgtcggtc aggtgatgaa ggcatccggc ggcaaggcca acccgcaggc
     1621 ggtgaacgag ctgctcaaaa cgaagctcgg catctgatca ccaacacgca gcgcacgaca
     1681 aaagtcggac gagagcgacg atgtttttct gttgcctgtc ctgcgtgcgc cttctcccgc
     1741 ggtttgtttt cagcgaatca ctcccgggcc gattcgctcg attcttgcca aattcggcgc
     1801 tgggaagcgg gtttgagagc ctctgtgcag aaaatttttt gcacaagttg cttggtatgc
     1861 ttaacgcatc gttgcggccg ctttggtgat cgcacgcgcg tcacgcgctc agcgtactct
     1921 ctgcaatcgc gcaaaaagtc aaacacatcg aaaagctata ttttatcggc attttcgagc
     1981 gctcggaaaa atctcgtgct gggcgctgcg caatcgtgct gtgcaacatg tcgcgcgttt
     2041 tgcgcgtgct gctgaggtcg cacgacatgc tgccggcgca ggcacaaaca tgcctgatgc
     2101 tgcaaaaaca ctggtttttt tatcacgctg tagtaatccc aatgcagtgt tcgcgatccc
     2161 cgcgggcacg gacgacatcg ccactcactc acggctagga gggcagcatg gcgaagaagc
     2221 gaaggaagat ggcgaaggca gcgaaaaagg gcgcaaaaaa gaccaagcgc cggaagaaga
     2281 agtaaccgcg cgccgcgcat cagtcttcga tttcgaacga cgtcgatgac tgcgtcaaac
     2341 gggccggcgg aagtcgaaga gcggtgagcg cgcgtcgcgc tcgcacttcg aaatcgccgg
     2401 ccccggtcga cgacaggggg cgtcggcgag acaggggtcg agcttcacgg tccccgctcg
     2461 gcggacagtg aagatgagga aacggaagag ctccgtacct cgcggtggca aagcatttgc
     2521 cgccggactc gtagccccgg cctctcgccg acgccctcgg tatttttaaa agcgcgtgcc
     2581 gcgtggcgga ggggcgggcg g
//
LOCUS       DATCWM010000506         3897 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_349200, whole genome shotgun sequence.
ACCESSION   DATCWM010000506 DATCWM010000000
VERSION     DATCWM010000506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3897)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3897)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3897
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_349200"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..421
                     /locus_tag="VIQ50_09915"
     CDS             <1..421
                     /locus_tag="VIQ50_09915"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9360740.1"
                     /translation="NGSAEVAQAVLTKSVDFSFDGPSASLSLIQSGAFRVLAKFDPRP
                     FPPVPDLPIITAEVPNMDEITVWLGLVAPKGTPPAIIDKLQAEVAKILADPVIKAKAD
                     ASGLFPATSTPAEFSAFIRKEAQRWSVVVKETGMKYD"
     gene            431..1462
                     /locus_tag="VIQ50_09920"
     CDS             431..1462
                     /locus_tag="VIQ50_09920"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9360741.1"
                     /translation="MDSELVVSRFTVRFVGCFGALFAAALIGVLATAGAIAQRSDDSQ
                     TYPNRAVRIIVPFPPGGPTDILARVLAQRLSEVWGQPVVIENQPGANTAIAAARVAKM
                     PPDGYTLLAAMDVTLVLNPLTARNLAYDPLKDFAPISLASKNTSLMSVRAEDGPRTVK
                     ELIARAKASPGKLNYGAGIITTRLAGYLFNREAELDAQYIPFNGSAPTVQGLLTGAVD
                     YIIDGAATSLPLVHDGKLRALAKLNSRPLPALPEVMPLAVEAGIPALDDISTWVGLVA
                     PAGTARPVIDKIQRAIVKMYADPVIAGKLEKSGISAVSSTPEEFDAFVRKELDRWGQV
                     FKDSGIQLN"
     gene            1550..2518
                     /locus_tag="VIQ50_09925"
     CDS             1550..2518
                     /locus_tag="VIQ50_09925"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9360742.1"
                     /translation="MLRAFAVLAFVAITSSGSPAVAQDIWPSKPITVIVPFGAGGNTD
                     SLARIYSARLSARLGQQFVIENRVGAGSIIGITSLAKAAADGYTIGIGTSAGLAINPA
                     IMKENLGYSADKDFAYLHLMAIQPNLLVVHPSVPARTLPEFIAWVKANPDQAYATSGN
                     GSSQHLCGEMLIQAASIKMVAVAYRASNQQMQDLVGGQIRIACDNFSSAWEQVQAGKI
                     RAIAVTSAKRYSFGPDIPAVAETLPGFEVQAWFGWIAPVGVPKIVIDKLIAELNAIGQ
                     EPDVRKRLDTFTVEFSGLSGQAFADFARKERETLTPIVEKANIKLN"
     gene            2541..3677
                     /locus_tag="VIQ50_09930"
     CDS             2541..3677
                     /locus_tag="VIQ50_09930"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9360743.1"
                     /translation="MSKPKILIFAPREEPPETINALEGLGCELVFGDRAWQLPRSKHE
                     DAVIEAARGAVALMGTSMRHTPISRRIMQASQRLRIVAKYTVGVDDIDTEAATELGIM
                     VCHAPTESNCFGVAETTIAFMLSLLKKVAERDADVRAGKWRTADNFAYYVGSRTSDGF
                     PGQTIGLVGLGRIGTRVAQLLAPWRARIIAYDPYVPPSHFLTHGVMAVDYQTLLRESD
                     VVSFHVVLTRETRYMFGEAELKLMKPNAIVLNTARGKVVDETALARAIAEGRIRGAAI
                     DAFEEEPLPMDSPLHKLGDRVLLSPHSASYTEGGELRQGVAWATRSVITALKGGIPDN
                     VYNREVLPRWKERFGGRQRDLGLTPLDNRPILLESVRPQGEEII"
BASE COUNT          740 a         1262 c         1178 g          717 t
ORIGIN      
        1 caacggcagc gccgaagtgg cgcaagccgt gctcaccaag agtgtggatt tttcctttga
       61 cgggccgtcc gcctcgctct cgctcatcca gagcggggcg ttccgcgtgc tggccaagtt
      121 cgatccgcgc ccgttcccgc cggtgccgga tctgccgatc atcaccgccg aggtgccgaa
      181 catggacgag atcacggtct ggctcggtct tgttgcgccc aagggcacgc ctccggccat
      241 catcgacaag ctgcaggcgg aagtggctaa gatcctggcc gaccccgtca tcaaggcgaa
      301 ggcagatgcc tcgggcctgt tcccggccac cagcacgccc gcagaatttt cagccttcat
      361 tcgcaaggag gcacagcgct ggtccgtggt cgtgaaggaa accggaatga agtacgattg
      421 atcggcgtcg atggattccg agctagtcgt gtcgcggttt accgtccgct tcgttggttg
      481 tttcggcgcc ctgtttgccg cggcgctcat cggcgtgctc gcgaccgccg gcgctatcgc
      541 ccaacgcagc gatgacagcc agacgtatcc caaccgagca gtccggatca tcgtgccgtt
      601 ccctcccggc gggccgaccg acatcctcgc tcgcgtgctc gcacagcgct tgagcgaagt
      661 gtggggccag ccggtggtga tcgagaacca gccgggcgcc aacacggcca tcgcggccgc
      721 gcgcgtggcc aaaatgccgc ccgatggcta cacactgctt gcggcgatgg atgtcacctt
      781 ggtgctcaat cccctcaccg cccgcaatct cgcttacgac ccgctcaagg acttcgcgcc
      841 gatctcgctt gcgtccaaga acacgtcgct catgagcgtt cgcgccgagg acggcccgcg
      901 gacagtgaaa gagctgatcg cgcgcgccaa ggccagtccc ggcaagctca actacggcgc
      961 ggggatcatc acgacgcggc ttgccgggta tctgttcaat cgcgaggccg agctcgacgc
     1021 gcaatacatt ccgttcaacg gcagcgcgcc gacggtccag ggtctgctga ccggcgcggt
     1081 cgactacatc atcgacggcg ccgccaccag ccttcccttg gtccacgatg gcaagctacg
     1141 cgcgttggcc aagctcaaca gccggccgct gccggccttg cccgaggtca tgccgctcgc
     1201 cgtggaagcc ggcattccgg cgctcgacga tatctcgacc tgggtcggac tcgttgcgcc
     1261 cgccggcacg gcacgccccg tgatcgacaa gattcagcgc gcaatcgtta agatgtatgc
     1321 cgatcccgtc atcgccggga agctggaaaa atccggcatt agcgcggtga gcagcacgcc
     1381 ggaagaattc gatgccttcg tgcgcaaaga gctggatcga tggggtcagg tattcaaaga
     1441 cagcggtatc cagctgaatt agggcctcga ttcaatctcg tccgggttgc gccgcgagca
     1501 gcctttggca atcatttcat caagagcttg ccaaacaggg agggatcaca tgctgcgcgc
     1561 cttcgccgta ctggcatttg tcgccatcac ttcaagtggg tcgccagccg tggcacagga
     1621 catctggccg tccaagccga taaccgtgat cgttcccttc ggcgccggcg gcaatacgga
     1681 tagcctcgct cgaatttatt cagcgcggct atccgcacgt ctcggccaac agttcgtgat
     1741 cgaaaatcgg gtgggcgccg gaagcataat cggcataacg agcttggcga aggccgcagc
     1801 ggacggttac acgatcggca ttgggacctc cgctggtctt gccatcaatc cggcgatcat
     1861 gaaggaaaac ctcggctaca gcgccgataa ggactttgcc taccttcact tgatggctat
     1921 tcagcccaac ctgcttgtcg tgcatccctc cgtcccggca agaacccttc cggagttcat
     1981 cgcctgggtt aaggccaatc cagatcaggc gtacgccaca tccggcaacg gttcgagcca
     2041 gcacctttgc ggcgagatgc tgatacaggc cgccagtatt aagatggttg ccgtggcata
     2101 ccgcgcgtcg aaccagcaga tgcaggatct cgtcggcggc cagatcagga tcgcttgcga
     2161 taacttctca tccgcctggg aacaggtcca ggctgggaaa atccgtgcaa tcgccgtgac
     2221 ctcggccaag cgctactcct tcgggccgga tattccggcc gtcgccgaga cgttgccggg
     2281 cttcgaggtg caggcttggt tcgggtggat cgctccggtc ggggtgccga agatcgttat
     2341 cgacaagttg atcgcggagc tgaatgccat cggccaggag ccggacgtac gcaaacggct
     2401 cgataccttt acagtcgagt tctccggcct ttccgggcaa gccttcgcag acttcgcgcg
     2461 caaggagcgc gagacgctca cccccattgt tgagaaggcc aacatcaagc tgaattaggc
     2521 ccccgtgcca cggagcctgc atgtccaagc cgaaaattct catctttgcc ccgcgcgaag
     2581 agccacccga gaccatcaac gcgcttgaag gactgggctg cgagctcgtg ttcggcgacc
     2641 gcgcctggca attgccccgc agcaagcatg aagatgcagt gatcgaggca gcgcgcggcg
     2701 cggttgcgct catgggtacg tcgatgcgcc acactccgat cagccggcgg atcatgcagg
     2761 cctcgcagcg gctgcgcatc gtcgcgaaat acacggtcgg cgtcgacgac atcgacacgg
     2821 aagccgcgac cgagcttggg atcatggtgt gccacgcgcc gacggagtcc aactgcttcg
     2881 gcgttgccga gacgaccatc gcattcatgc tttccttgct gaagaaagtc gccgagcgcg
     2941 acgccgacgt gcgcgcaggc aaatggcgca ccgcagacaa ttttgcctat tacgtcggca
     3001 gccgcacctc cgacggattt ccaggccaga ccattggtct ggtcggcctc ggccgaatcg
     3061 gaacgcgcgt cgcccagctt ctcgcgcctt ggcgtgcgcg catcatcgcc tacgatccct
     3121 acgtgccgcc ttcgcacttc ctcacccacg gcgtcatggc ggtcgattat caaacgttgc
     3181 tgcgggaatc ggacgtcgtg tcgttccacg tcgtgctcac gcgggagacg cgctacatgt
     3241 tcggtgaagc cgagctcaag ctgatgaaac cgaacgccat cgtgctcaac accgcgcgcg
     3301 gcaaggtggt ggacgaaacg gcgctcgccc gcgccatcgc cgaggggcgc atccgcggcg
     3361 ccgcgatcga tgccttcgag gaggagccgt tgccgatgga ctcgcccctg cacaagctcg
     3421 gcgaccgggt gctgctttcg ccgcattcgg cctcctacac cgaggggggc gagttgcggc
     3481 agggcgtagc atgggccacg cgttccgtga tcaccgccct caagggaggc attcccgaca
     3541 acgtctacaa ccgagaggtc ttgcctcgct ggaaggagcg cttcgggggg cgccagcgcg
     3601 acctcggttt gacccccctg gacaaccggc ccattctgct cgaatcggtg cggccccagg
     3661 gcgaagaaat catttaattt ctgtgacaca tcatggcctt aggccatgca ttccttgcat
     3721 agctgcgccg caacatagcg cctaatgcag tgcaccatgg aaccttattt aaccgacaag
     3781 aagcgaattg ctcggcgtgg cgccgggcag aaaggcaatg aatatgttgg ttgcaatcct
     3841 caacttcctc cgcgcgtgga ggcgctataa cgcgagcctg agggaactca ctcagct
//
LOCUS       DATCWM010000507         3153 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_505771, whole genome shotgun sequence.
ACCESSION   DATCWM010000507 DATCWM010000000
VERSION     DATCWM010000507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3153)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3153)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3153
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_505771"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..455
                     /locus_tag="VIQ50_09935"
     CDS             <1..455
                     /locus_tag="VIQ50_09935"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEY9360744.1"
                     /translation="DKSKSAFVAPTLLRLKDTDNAQAVHQVEVFGPAATIVPYRDEQD
                     AAALIARGGGSLVASVYGEDKNFLARMISEIAPGHGRILAIDPTIATAHTGHGIVMPQ
                     CNHGGPGRAGAGEELGGLFGLRFYHQRLAVQGSSELLASLQATAASLH"
     gene            526..1986
                     /locus_tag="VIQ50_09940"
     CDS             526..1986
                     /locus_tag="VIQ50_09940"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008143435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase family protein"
                     /protein_id="HEY9360745.1"
                     /translation="MSSSEERKARSFVERHGLWNDEQFEAAALADKRIEDDGLDTVRL
                     SFPDQHGILRGKTVVATEAVAAMRNGCSITTTLLAKDTAHKTVFPVFTTGGGFGMAEM
                     EGGGDFLMVADPATFRVLPWAPRTGWVLCDIYFADGKPVPFSTRHLYRRALQRLAEAG
                     FDYVAGLEVEFHVFKLDDARLAPADATWPGAAPQVSLLTQGYQYLTETRFDQLEPILD
                     IVRREIVALGLPLRSIEVELGPSQCEFTFQPQVGLSPADTMMLFRSAVKQICRRQGCH
                     ATFMTRPKLDNVMSSGWHLHQSLRERRTGANAFAAKDNDLLSPVGRGFLAGLLAHARA
                     AAAFTTPTINGYKRYRSYSLAPDRVIWGRDNRGAMIRVLGGRGDAATRLENRAGEPAA
                     NPYLYMAAQIVSGVDGVDKSLDPGPSADTPYEVAAVPLPKSLEEALAALRGDTCLAAG
                     FGEDFIAYYLRIKEAELARYRAEVTDWEQREYFELF"
     gene            2101..2754
                     /locus_tag="VIQ50_09945"
     CDS             2101..2754
                     /locus_tag="VIQ50_09945"
                     /inference="COORDINATES: protein motif:HMM:NF020771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CerR family C-terminal domain-containing
                     protein"
                     /protein_id="HEY9360746.1"
                     /translation="MARQAKVTRVSKATREKIIRAASRAFALNGYEGASIRTIVAEAD
                     VNQAAINYHFGSKEGLYRAVLQAAVRALMSDGDGAEGPGTLSRKTALRRFVRGQLRPM
                     TARDELSDYVRIFNWETLKPSPVFRQFMAKEATPFLAGASALARRFLPEDATDEQAII
                     GALWLFGQCSIFVRNAEQLAKAPFRLELDERFVDRLADMIAGWAANGLGRLSSQARS"
     gene            2971..>3153
                     /locus_tag="VIQ50_09950"
     CDS             2971..>3153
                     /locus_tag="VIQ50_09950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360747.1"
                     /translation="MKSFIGKFAVKFIEMAGAGLASALCAYILGQVERAPVPTPMPAV
                     VYISPANVDTALREDHS"
BASE COUNT          535 a         1020 c         1036 g          562 t
ORIGIN      
        1 tcgacaagag taaatcggcc tttgtcgcgc cgacattgct caggctcaag gacacagaca
       61 acgcgcaggc tgtgcatcag gtcgaagtgt tcggtccggc cgcgaccatc gtgccgtatc
      121 gcgacgaaca ggacgccgcc gcgctcatcg cgcgcggagg cggctcgctg gtcgcatcgg
      181 tctatgggga ggacaaaaat tttctcgcgc gcatgataag cgaaatcgcg ccgggccatg
      241 gtcgcattct tgccatcgat cccacgattg cgacggcgca taccgggcac ggcatcgtga
      301 tgccgcaatg caatcacggc ggaccgggcc gggctggagc gggggaggag ctgggcggcc
      361 tttttggcct gcgtttctac catcagcgac ttgccgtgca gggatcgagc gagctgcttg
      421 ccagccttca ggcaacggct gcgagcttgc actgagcttc gatctcggcg cgctcgaacg
      481 gcgtggttaa atggactaac cttggttcag cagctgggtg gttcggtgtc gtcctcggaa
      541 gaaagaaagg cgcgcagctt cgtcgagcgc cacggcctgt ggaacgacga gcagttcgaa
      601 gcggcggcgc tcgcggataa acgcatcgag gatgacgggc tcgacacggt gcgcctgtcg
      661 ttccccgacc agcacggcat cttgcgcggc aagaccgtgg tggcgacgga agccgtggcg
      721 gcgatgcgca acggctgctc gatcactacc acgctcctcg ccaaggacac cgctcacaag
      781 acggtgtttc cggttttcac caccggcggc gggttcggca tggcggagat ggaaggcggc
      841 ggcgacttcc tcatggtcgc cgatcccgcc acgttccgcg tcctgccgtg ggcgccgcgc
      901 actggctggg tgctgtgcga catctacttc gccgacggca agccggtgcc gttctcgacc
      961 cggcaccttt atcgccgcgc actgcagcgg ctcgccgagg ccgggttcga ctacgtcgcc
     1021 ggcctcgagg tcgagtttca tgtgttcaag ctcgatgatg cgcggcttgc gccggccgat
     1081 gccacttggc cgggcgcggc gccccaagtc agcttgctca cccagggcta tcagtatctg
     1141 accgaaacgc gcttcgatca gctcgagccg attctcgaca tcgtgcgccg tgagatcgtc
     1201 gcgctcggct tgccgctgcg ctcgatcgaa gtggagcttg gcccgagcca atgcgagttc
     1261 accttccagc cgcaggtcgg gctttcgccc gccgacacca tgatgctgtt ccgcagcgcg
     1321 gtgaaacaga tctgccggcg gcaagggtgt catgcgacat tcatgacgcg tccgaagctc
     1381 gataacgtga tgtcgagcgg ctggcacctg caccagtcgc tgcgcgagcg gcgcaccggc
     1441 gccaacgcgt tcgcggcaaa ggacaacgac ctgctctcgc ccgtggggcg cggctttttg
     1501 gctggtctcc tcgcgcatgc gcgcgctgcg gcggcgttca ccacgccgac catcaacggc
     1561 tacaagcgct accgcagcta ttcgctcgcg cccgaccgcg tgatctgggg tcgcgacaat
     1621 cgtggcgcca tgatccgcgt gctcggcggc cgcggcgatg cggcgacacg gctcgaaaat
     1681 cgggccggcg aaccggctgc caatccctac ctctacatgg ccgcgcaaat cgtcagcggt
     1741 gtcgacggcg tggataaaag cctcgacccc ggcccgtcgg cggatacgcc ctacgaagtt
     1801 gcggcggtgc ctttgccgaa aagcctcgag gaggcgctcg cggcgctgcg cggcgatacc
     1861 tgcctggcgg ctggcttcgg ggaggatttc atcgcgtatt acctgcggat caaggaggcc
     1921 gagctcgccc gctaccgcgc ggaggtgacg gactgggagc agcgggaata tttcgagctg
     1981 ttttaaaaat ggcggccaac actcgtcatt cgcagcgccg ctcccctcgt atgagcgcga
     2041 gcttgtcggg ccggtcgctg cgcgctatat caaacgcccg tttgaaattg gatatggcac
     2101 atggcgcggc aggcgaaggt gacccgggtc tcgaaggcga cccgcgaaaa aatcatcaga
     2161 gcagcatcgc gcgccttcgc gctgaacggc tacgagggcg cgagcatccg caccatcgtc
     2221 gctgaggccg acgtcaacca ggccgcgatc aactatcact tcggcagcaa ggaaggcctt
     2281 tatcgcgcgg tgctgcaggc ggccgtgcgc gcgctgatga gcgacggcga tggggcggag
     2341 ggccccggca cgctgtcgcg caaaacggcg ctgcgccggt tcgttcgcgg gcagctgcgg
     2401 ccgatgactg cgcgcgacga gctcagcgat tacgtgcgca tcttcaactg ggaaacgctc
     2461 aaacccagtc cggtcttccg ccaattcatg gccaaagaag cgacgccgtt ccttgccggc
     2521 gcgagcgcgc tcgctcgccg cttcctgccg gaggatgcga cggacgagca ggcgatcatc
     2581 ggcgcgctgt ggctgtttgg ccagtgcagc attttcgtgc gcaatgccga gcagctggcc
     2641 aaggcgccgt ttcgcctcga gctcgacgaa cgctttgtcg accggctcgc cgatatgatc
     2701 gccggctggg cggcaaacgg gctcggccgg ctgtcaagcc aggcgcgctc atagggtgca
     2761 ttccgccgct gggcgtgcca actccttcgc tcaggcgcgt gccccgctgc cgtccccgcg
     2821 ctcgcccccc gctcgactgc ccgagcggcc atgcgcgtcg ccgggcgcta gttttccctc
     2881 aaattatcac gccccgcttc ctttccgcct cgaagttgtc tcaaacggat gtttgaaatt
     2941 caatcagtcg tttgaaatcg gagggcatcc gtgaaatcat ttatcgggaa attcgcggtc
     3001 aagttcatcg aaatggcggg cgcggggctc gcaagcgcgc tatgcgcgta cattttgggg
     3061 caggtggagc gggcgcctgt gccgacgccg atgcccgcgg tggtctacat atcgcccgcc
     3121 aacgtagaca ccgcgctccg cgaggatcat agc
//
LOCUS       DATCWM010000508         3869 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_376279, whole genome shotgun sequence.
ACCESSION   DATCWM010000508 DATCWM010000000
VERSION     DATCWM010000508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3869
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_376279"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..704)
                     /locus_tag="VIQ50_09955"
     CDS             complement(<1..704)
                     /locus_tag="VIQ50_09955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HEY9360748.1"
                     /translation="MALALLLFLSLTVVPAVALVLPTLSGRVVDDANILDPPTRAALD
                     QKLADLEAKTTDQLVVVTLKSLQGTSIEDFGVQLGRAWRIGQRDKNNGVLLIVAPSER
                     KVRIDVGYGLEGTLTDAVSKLIIENAIVPRFRANDVPGGVTRGVDDIVSVLTGDAEEW
                     KQRAAKRPDPPLPWGTILILILALAMFAVVFAMIVGAMPRQPNGRRRRSASPWGSGPW
                     WTGSSRGFSGGGGFSGG"
     gene            complement(829..1443)
                     /locus_tag="VIQ50_09960"
     CDS             complement(829..1443)
                     /locus_tag="VIQ50_09960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010912203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HEY9360749.1"
                     /translation="MNSKSSVWRLAGASVVIAALGLLLAGCGVNNIPSYEESAKADWS
                     QVLNQYQRRADLIPNLVETVKGYAAQERQVLEEVTNARARATQVQVQIPPDIVTNPEA
                     FKRFQDAQAQLTGALGRLLAVSERYPDLKSNQNFLTLQSQLEGTENRIAVARRDYIEA
                     VRRYNTELRTFPGVIWASTLYRNNKPMETFTVAEDVTRPPQVKF"
     gene            1807..3546
                     /locus_tag="VIQ50_09965"
     CDS             1807..3546
                     /locus_tag="VIQ50_09965"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011428033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEY9360750.1"
                     /translation="MERRLAAIFAADVVGYSRLIGADEEGTLARLKAHRRELIDRKIA
                     DHQGRIVKTTGDGVLAEFASPVKAVRCAIEVQHGMAERNADVPQDERIEFRIGINLGD
                     VVVDDEDIYGDGVNVAARLENIAEPGAVYISRAVRDFVNDAPELVLEDLGEQPLKNIA
                     KPVQVFRIPAPDRAPSATQAAAPAVPHKPSIAVLPFANMSGDAEQEYFSDGITEDIIT
                     DLSKISALFVIARNSSFAYKGKSVKVQEIGRDLGVRFVLEGSIRKAGNRVRITAQLID
                     AASGGHLWAERFDRDLTDIFATQDEVVEKIVGALAVNLTHGEARRLRRRGTASVEAYE
                     TWLRARECLNRSTREAVAQAKTIYRRAIELDQSFSAPHVGLALALIADYVSDWAEDPA
                     QALDEAERWARRALELNDQDPVSHLALGSVFLWRRNHDGALAECRRMIELDPNFAQGH
                     SATGLALMYAGHPAEALEAIAVAMRLDPHYSGIVLHFLAQANFSLGNYEAAVGQLRRR
                     IARTPGTDSSRMMLAACYGHLGRLEEARAMWAELMQVNPDFSFAQRERVLPYKDPRDF
                     QRIADGLAKAGLP"
     gene            3688..>3869
                     /locus_tag="VIQ50_09970"
     CDS             3688..>3869
                     /locus_tag="VIQ50_09970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360751.1"
                     /translation="MRRFAMVLVALLMAGGSAVADRVDPAVTAMLRTWSLLPPSAFRV
                     VICHGFGCAFRTEVGLG"
BASE COUNT          643 a         1275 c         1320 g          631 t
ORIGIN      
        1 ccgccgctaa atccgccacc gccggaaaag ccgcgagagg agccggtcca ccaggggccg
       61 gatccccatg ggctcgccga tcttcggcgc cggccgttcg gctggcgcgg catcgcgccg
      121 acgatcatgg cgaaaaccac ggcaaacatg gcgagcgcca ggatcaggat caggatcgtg
      181 ccccaaggca gcggcggatc gggtcgcttc gccgcgcgct gtttccattc ctcggcgtcg
      241 cccgtgagca cgctgacgat gtcgtcgacg ccgcgggtta cgccgcccgg gacgtcgttg
      301 gcgcgaaagc gcgggacgat tgcgttctcg atgatgagct tggagacggc gtcggtgagc
      361 gtgccctcga ggccatagcc gacgtcgatg cgcaccttgc gctcgcttgg cgccacgatc
      421 agcagcacgc cgttgttctt gtcgcgctgt ccgattcgcc aggcgcggcc gagctgaacg
      481 ccgaaatcct cgatcgaggt gccctgcagc gacttgagcg tgacgaccac gagctggtcg
      541 gttgtcttgg cttcaaggtc ggccagcttc tggtcgagcg cggcgcgcgt cggcggatcg
      601 aggatgttgg catcgtccac cacgcggccg ctgagcgtgg gcagcacgag cgcaacggcc
      661 ggaacgacgg tgagcgaaag aaaaagcaat aaggcaagcg ccaagcccgc gcgcaggcgt
      721 cggtcgtcgc cctctgcgcg gctccgtccc gcaagcttga gagcggccgc gccgcatgcg
      781 cagcgcgcac ccacatcgga ctggcgcgct gcgctcacgg cgcaaccgtc agaatttcac
      841 ctgcggcggc cgggtcacgt cttcggccac cgtgaacgtc tccatcggct tgttgttccg
      901 gtagagcgtc gaggcccaga tcacgccggg gaacgtgcgc agctcggtgt tgtagcggcg
      961 cacggcttcg atgtagtcgc gccgggcaac ggcgatgcgg ttctcggtgc cttcgagctg
     1021 cgactgaagc gtgaggaaat tctggttcga cttcaaatcg ggatagcgct ccgacactgc
     1081 aagcagccgc cccagcgcgc ccgtgagctg tgcctgcgcg tcctggaagc gcttgaatgc
     1141 ctccggattg gtgacgatgt ccggcggaat ctgcacctgc acctgggtcg cgcgcgcccg
     1201 cgcgttggtc acctcttcca gaacctgccg ttcctgcgcg gcatagccct tcacggtctc
     1261 gaccaaattg ggaatgaggt ccgcgcggcg ctgatattgg ttgagcacct gcgaccaatc
     1321 cgccttggcg ctttcctcat agctcgggat gttgttgacg ccgcagcccg cgagcaagag
     1381 accgagagcc gcgatcacga ccgaggcgcc agccaggcgc cacacgcttg atttgctgtt
     1441 catggatcaa atctccaaca tcccttcata gcaatgcgtc ggccgctgca acagcccatt
     1501 gcgggggaaa cgagggccgg ctcgcgtgac acgcgcgccg gtacggagtg ccctgcgttc
     1561 acggggtccg aggtgccggg tgattcgagg gcaagggacg gagtgcggat gaccttcact
     1621 ggattgcccg gcgaaggcgg agaaccgtcc gccgcgagcc gatgcagcaa gatcgtgtcc
     1681 gtgacgatgc cagtcgagaa tgctccaggg ggcacatacc gatccgcggc gcagacccca
     1741 tataatgtcc gggcgatctc ctcgccctcg tccgcggggt ccgatttgtt cgacaacgga
     1801 gctgtcatgg agcgtcggct cgctgccatt tttgccgcgg atgtcgtggg ttactcccgg
     1861 ctgatcggcg ccgacgagga gggcacgctg gcgcgcctca aggcacaccg gcgcgagctg
     1921 atcgaccgca agatcgccga tcaccagggg cgcatcgtca agacgaccgg cgacggggtg
     1981 ctggccgagt tcgcgagccc ggtcaaggcg gtgcgctgcg cgatcgaggt gcagcacggg
     2041 atggccgagc gcaacgccga cgtgccgcag gacgagcgca tcgaattccg catcggcatt
     2101 aatctcggcg acgtagtcgt cgacgatgaa gacatctacg gcgacggggt gaacgtggcg
     2161 gcgcggctcg agaacatcgc cgagccgggc gccgtctaca tctcgcgcgc ggtgcgcgac
     2221 ttcgtcaacg acgcgcccga gctggtgctc gaagatctgg gcgaacagcc gctcaagaac
     2281 atcgccaagc cggtgcaggt gttccgcatt ccggcgccgg accgcgcgcc gagcgcaacg
     2341 caagcagccg ccccggccgt gccgcacaaa ccctccatcg ccgtgctgcc gttcgcaaac
     2401 atgagcggcg acgccgagca ggagtatttc agcgacggca tcaccgagga tatcatcacc
     2461 gacctgtcga agatctcggc gctgttcgtc atcgcccgca actcctcgtt cgcctacaaa
     2521 ggcaagtcgg tgaaggtgca ggaaatcggg cgcgacctcg gcgtgcgctt cgtgctcgag
     2581 ggcagcatcc gcaaggccgg caaccgcgtg cgcatcaccg cgcagctcat cgacgccgct
     2641 agcggcgggc acctgtgggc cgagcgcttc gaccgcgatc tcaccgacat cttcgcgacg
     2701 caggacgagg tcgtggagaa gatcgtcggc gcgctcgcgg tcaacttgac acacggcgag
     2761 gcgcggcggc tgcgccggcg cggcaccgcg agcgtggagg cgtacgagac ctggcttcgc
     2821 gcgcgcgaat gtctcaaccg cagcacgcgc gaggcggtcg cgcaagccaa gacgatctac
     2881 cgccgcgcga tcgagctcga tcagagtttc tccgctccgc acgtcggcct ggcgctggcg
     2941 ctgatcgccg actatgtcag cgactgggcg gaggacccgg cgcaggcgct cgacgaggcg
     3001 gaacgctggg cacgccgcgc gctcgaactc aacgatcagg acccggtgag ccacttggcg
     3061 ctcggcagcg tgttcctatg gcggcgcaat cacgacggcg cgctggcgga atgtcgccgc
     3121 atgatcgagc tggatcccaa ttttgcccaa ggtcattccg cgaccgggct ggcgctgatg
     3181 tatgccgggc atccggccga ggcgctggag gcgatcgcgg tggccatgcg gctcgacccg
     3241 cactattcgg gcatcgtgct gcactttttg gcgcaggcaa atttcagcct gggcaactat
     3301 gaggcggcgg tggggcagtt gcgcaggcgc attgcccgca cgcccggcac cgattcgagc
     3361 cgcatgatgc tcgccgcctg ctacggccat ctcgggcgcc tcgaggaggc gcgggccatg
     3421 tgggcggagc tgatgcaggt caaccccgat ttctcgttcg cgcagcgcga gcgcgtgctg
     3481 ccgtacaagg acccgcgcga ttttcagcgc atcgccgacg gcctggccaa ggcaggcctg
     3541 ccgtagcggg gcggtgcaac caggctggca aataagtcac gctttgccga aatcgacgcg
     3601 aggctgtccc ttgcggccgg cgccgccttg gccgcgcctt aacctccgtt tgtaaattca
     3661 ccgacggttg catcggggga ggtggacgtg cgccggttcg cgatggtgct cgtggcgttg
     3721 ctgatggccg gcggctccgc cgtcgcggac agggtcgacc ccgcggtcac cgccatgctg
     3781 cggacatggt cgctcctgcc gcccagcgca ttccgcgtcg tcatttgcca cggattcggc
     3841 tgcgccttcc gcaccgaggt cgggcttgg
//
LOCUS       DATCWM010000509         2151 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_478643, whole genome shotgun sequence.
ACCESSION   DATCWM010000509 DATCWM010000000
VERSION     DATCWM010000509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2151
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_478643"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..827
                     /locus_tag="VIQ50_09975"
     CDS             <1..827
                     /locus_tag="VIQ50_09975"
                     /inference="COORDINATES: protein motif:HMM:NF021230.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TorF family putative porin"
                     /protein_id="HEY9360752.1"
                     /translation="ALPDSRSGEAIVPVTPVIWGFFGKRLLGATYRGISYSGHQPSVA
                     AYVDAQQGWLYGYTNFNSVKFSTSPAVEVTVAAGIRPTLGPLEFDIGAAYYYYPGELG
                     PELSNYWEAHATLSHKVTDKLAWGPTITYSPDVWQSGAWGVYAAGTLAYELPNEFLPT
                     GLGWSLSLDFGRWMFGPTSAGGGESAAGGGLALPSFNNWHAGLTFSYQVFKLGLNYTD
                     TSLSKENCYILTGDLGATPGGVGNPGNNPTGLRSRLCGAIFSATLGFEFSPLTLGK"
     gene            complement(973..1095)
                     /locus_tag="VIQ50_09980"
     CDS             complement(973..1095)
                     /locus_tag="VIQ50_09980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360753.1"
                     /translation="MKNIIAALALAALISIPTFNAAANAAPVSPASSSFGSNGY"
     gene            complement(1239..>2151)
                     /locus_tag="VIQ50_09985"
     CDS             complement(1239..>2151)
                     /locus_tag="VIQ50_09985"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEY9360754.1"
                     /translation="PAGTRVLVLENDHSSAVLEWTTRARAGRFTVDAVPRPDDGDWTA
                     AVLAAIDAPGTPPVELASISSVHWADGGTIDIDRVAAALRKQGAMLLVDATHAAGVMK
                     IDVRAFDPDFLVFPTYKWLLGPYGRAFLYIAKRRQDGVPLEQTSYGRRAINSEQETYY
                     RDIEFVAGARRFDMGERDHFISLEMASVGMELLAQWGCDAVQARLRTLTCRLADELRD
                     DGVTIPDVAVRAPHILSLQFPAGMPERLVRELADEQVYVAPRIGRMRISPHVYNDEED
                     IERFLASFRQLAPRERVTSRSRMVERQ"
BASE COUNT          370 a          706 c          690 g          385 t
ORIGIN      
        1 aagcgcttcc cgacagccga tccggggaag cgatcgtgcc agtaacgcca gttatatggg
       61 gtttttttgg gaagcggctg ctcggcgcta cctatcgcgg catcagctat tccgggcacc
      121 agccgtcggt cgccgcctat gtcgacgcgc aacagggctg gctctacggc tacacgaatt
      181 tcaacagcgt caagttctcg accagcccgg ccgtcgaggt gacggtcgcc gccggcatcc
      241 ggccgacgct tggcccgctc gagttcgaca tcggcgcggc ctattactat tacccgggcg
      301 agctcgggcc ggagctttcg aactattggg aggcgcacgc gacactctcg cacaaggtca
      361 ccgacaagct cgcgtgggga ccgacgatca cctactcgcc ggatgtctgg cagagcggcg
      421 cgtggggcgt ctatgcggcc ggcacgctcg cctacgagct gccgaacgag tttcttccca
      481 ccggcctggg ctggtccttg tccttggatt tcggccgctg gatgttcggc ccgacctcgg
      541 ccgggggcgg cgaaagcgcc gcaggcggcg ggctcgcgct gccgtccttc aacaactggc
      601 atgccggact gacgttcagc taccaggtct tcaagctcgg cctcaattac accgatacga
      661 gtctctcgaa agagaattgc tacatcttaa ccggtgacct cggcgccacc ccgggcggcg
      721 tcggcaatcc cggcaacaat cccacgggat tgcgctcgcg cctgtgcggc gcgatcttct
      781 cggcgacact cggtttcgaa ttcagtcctt taacgctcgg caaatgacga gacgctgacc
      841 gcgtcgttgc cttgggctca cggcccgaca gggggccgaa ctcccccgca tgcgcgcgcg
      901 gccggcgcag ggccggccgc ttcgcagctc aatccaaagc ggagctttgg attgctgatt
      961 ggagtttgcc gattagtagc cgttcgagcc gaatgaggag ctcgccgggg acaccggcgc
     1021 cgcattggca gccgcgttga acgtcgggat cgaaatcagg gcagccaggg cgagagcagc
     1081 gataatgttc ttcatgacac atctcctttt gtggaccatc gtccttgatt tccgtcggcg
     1141 ccgataggcc agcgcctatg cctgtaatat gcgtcggcac gcgccgccat gctgtgatgg
     1201 ccatcacatt ttcacgacac gtcaggacga ttgggatgtt actgtcgctc aaccattcgt
     1261 gagcgagacg tgacccgctc ccgcggcgct agctggcgaa agcttgcgag gaagcgctcg
     1321 atatcctcct cgtcgttgta gacgtgcggg cttatgcgca tgcgcccgat gcgcggcgcg
     1381 acgtaaacct gctcatccgc cagctctcgg accaaccgtt ccggcatccc ggcgggaaac
     1441 tgcaggctca ggatatgcgg cgctcgcacc gcgacatcgg ggatcgtgac gccgtcatcg
     1501 cgcagttcgt cggcaagacg gcaggtgagc gtgcgcagcc gcgcttgcac ggcatcgcag
     1561 ccccattgtg ccagcagctc catcccgacg gaggccattt ccagcgagat gaagtgatcg
     1621 cgctcgccca tatcgaagcg ccgcgcgccg gcgacgaact cgatgtcgcg atagtatgtc
     1681 tcctgctcgg aattgatggc gcgacggccg tagctggttt gctccagcgg cacgccgtcc
     1741 tggcggcgtt tggcgatgta gagaaaggcc cgcccgtaag gccccagcag ccacttgtag
     1801 gtggggaaaa cgaggaagtc aggatcgaag gcgcgcacgt cgattttcat caccccggcg
     1861 gcatgggtgg catcgaccaa cagcatcgcg ccttgcttgc gcagcgcggc ggcgacgcga
     1921 tctatgtcga tcgtgccgcc gtccgcccag tgcactgagg agatggaggc gagctcaacg
     1981 ggcggcgtgc cgggcgcgtc gatcgcggca aggaccgccg cggtccaatc gccgtcgtcg
     2041 ggccgcggca ccgcgtcgac ggtgaaccgc ccggcccgcg cgcgggtggt ccactccagc
     2101 accgccgacg aatgatcgtt ctcgagcacc agcacgcgcg tccccgccgg c
//
LOCUS       DATCWM010000510         3939 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_462537, whole genome shotgun sequence.
ACCESSION   DATCWM010000510 DATCWM010000000
VERSION     DATCWM010000510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3939)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3939)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3939
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_462537"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            84..560
                     /gene="ccmE"
                     /locus_tag="VIQ50_09990"
     CDS             84..560
                     /gene="ccmE"
                     /locus_tag="VIQ50_09990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HEY9360755.1"
                     /translation="MTRKQRRFSLIGIALAVLALAVALVLSALKDSIVFFNSPTEVVE
                     KNIKPGTRLRIGGLVKEGSVSRGDGLAVRFAVTDGNRTVPVAYQGVLPDLFREGQGVV
                     AEGALDPSGTFRADSVLAKHDETYMPKDVAEALKKQGHWKDDYEKKLGAAPQGTAR"
     gene            605..2587
                     /locus_tag="VIQ50_09995"
     CDS             605..2587
                     /locus_tag="VIQ50_09995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008135090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase CcmF/NrfE family subunit"
                     /protein_id="HEY9360756.1"
                     /translation="MIAEFGHYALVLALALALFEASVPMVGARKNDPVLMASAGPAAL
                     AQFCFVATAFAALTICYVRSDFSVLNVFENSHSAKPLVYKLSGLWGNHEGSMLLWVLI
                     LSLFGALVALFGGNLPARLKATVLAVQASIAVAFILFILVTSNPFLRIPNPPFEGRDL
                     NPILQDPGLAVHPPLLYLGYVGLSIAFSFAIAALIDGRIDAAWARWVRPWTLLAWMFL
                     TLGIAMGSYWAYYTLGWGGWWFWDPVENASLMPWLAATALLHSALVMEKRDALKVWTI
                     LLAIVAFSLSLIGTFLVRSGVLTSVHAFATDPTRGVFILAILVLFIGGSLALFALRAP
                     MLKQGGLFAPVSREGALVLNNLFLVSACATVFIGTLYPLALEALTGEKISVGAPFFNA
                     TFAPLFVPLLIAVPFGPLLAWKRGDVLGVAQRLVGAAAIGVITVAVVFAMEGGGPILV
                     PFAVGLALYVIAGALMEIVERTGLLKVPVATAFARARGLPRSTWGAAFAHAGLGITLL
                     GVIGETQWSLERIAELKPGQSISIRRYDLHFDGVSTRQGPNYRDLAAHFTVRRHGEFI
                     GVMEPAKRSFPSRGTAVTQTALMTRGVSQLYLSLGDPNPDGSLAVRLYYKALVLLIWL
                     GAVVMVIGGALSLSDRRLRVGAPRPARSKAALSPAE"
     gene            2595..3077
                     /locus_tag="VIQ50_10000"
     CDS             2595..3077
                     /locus_tag="VIQ50_10000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011442327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein"
                     /protein_id="HEY9360757.1"
                     /translation="MRSLCLIIVLLTVAAVPCAIAVEPDEVLSDAALEARARALSKEL
                     RCMVCQNQSIDDSEAPLARDLRILVRERLQAGDSDRQVIDFLVARYGEFVLLRPRFSW
                     HTAVLWLGPAAMLLIGGCAVLVLVRRYRTNSAAAANGQQELTAAEAARLSDILRDGER
                     "
     gene            3247..>3939
                     /locus_tag="VIQ50_10005"
     CDS             3247..>3939
                     /locus_tag="VIQ50_10005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007608315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEY9360758.1"
                     /translation="MTASVPAPKSRTLSARRLVLLAGVAGLGVTVLLGSAGILPQPGA
                     PLSAVAYAQGAERPMGFADLVEKVKPAVISVRVKMASGPKMMGFEGDTPIPPNVERFF
                     RRFGLPEGATPEERRAPREHLVTGQGSGFFISADGFAVTNNHVVDKAETVEVTADDGK
                     TYTAKVIGTDPRTDIALIKVDGRSDFPYVRLAEKAPRVGDWVLAVGNPFGLGGTVTAG
                     IVSARGRDIGAGP"
BASE COUNT          569 a         1298 c         1277 g          795 t
ORIGIN      
        1 ccggcgatgc ggtcaagctg cgccagttgg acgacctgct cagagggctc ggcctggaag
       61 gctgagggtc agaggaccgc gcgatgaccc gcaagcaacg acgcttctcg ctgatcggca
      121 tcgcgctcgc cgtgctcgcg ctcgcggtgg cgctggtgct cagcgcgctc aaggactcca
      181 tcgtcttctt taactcgccg accgaggtgg tggaaaaaaa catcaagccg gggacgcgcc
      241 tccgcatcgg cggcctggta aaggaaggca gcgtgtcgcg cggtgacggc cttgccgtcc
      301 gtttcgccgt gaccgacggc aatcgcacgg tgccggtcgc ctaccagggc gtcttgcctg
      361 atcttttccg cgaagggcag ggcgtggttg ctgaaggcgc gctcgacccg agcgggacct
      421 tccgcgccga tagcgtgctc gccaagcacg acgagaccta tatgccgaag gacgtcgccg
      481 aggccttgaa gaagcagggc cattggaaag acgattacga gaagaagctc ggcgccgcgc
      541 cacaaggcac ggcgcgatga tgcgtgccgc gcgttcgtgc gcggaacggt tgacgggata
      601 gaaaatgatc gccgagttcg gccactacgc cctcgtactt gcgcttgcgc tggccctctt
      661 cgaggcgagc gtgcccatgg ttggagcccg caagaatgat cccgtgctga tggccagcgc
      721 cgggcccgcc gcgctcgcgc aattctgctt cgttgcgacc gcttttgccg cgctgacgat
      781 ttgctacgtg cgctcggatt tttccgtgct caacgtgttc gagaactccc attcggcaaa
      841 accgctcgtc tacaagctca gcgggctatg gggcaatcac gaaggctcga tgctgctatg
      901 ggtgctcatt ctcagcctgt tcggcgcgct ggtggcactg ttcggcggca acctgccggc
      961 gcggctcaaa gctaccgtgc tcgcggtgca ggcctcgatc gcggtcgcat tcattctctt
     1021 cattctggtc acgtcgaatc catttttgcg catcccgaac cccccgttcg aagggcgcga
     1081 cctcaatccc attctgcagg atcccggcct cgccgttcat ccgccactgc tctacctcgg
     1141 ttacgtcggt ctctcgatcg cgttttcctt cgccatcgcc gccctcatcg atgggcgcat
     1201 cgatgcggca tgggcgcgct gggtgcggcc ctggacgctg ctcgcctgga tgttcctgac
     1261 gctcggcatc gcgatgggct cgtactgggc gtattacacg ctcggctggg gcggctggtg
     1321 gttctgggat ccggtggaga acgcctcgct gatgccctgg ctcgccgcca ccgcgcttct
     1381 gcactccgcg ctggtgatgg agaaacgcga tgcgctcaaa gtgtggacca tcctgctcgc
     1441 gatcgtggcc ttctcgctct cgctgatcgg taccttcctc gtgcgctcgg gcgtgctcac
     1501 ctcggtgcac gcttttgcca ccgacccgac tcgcggcgtc ttcatcctgg cgatcctggt
     1561 tctgttcatc ggcggcagcc tcgcgctgtt tgcattgcgc gcgcccatgc tcaagcaggg
     1621 cggcctgttc gcgccggtgt cgcgcgaagg cgcgctcgtg ctcaacaacc tcttcctggt
     1681 gagcgcctgt gcgaccgtat tcatcggcac gctttatccg ctcgcgctcg aggcgctcac
     1741 aggtgaaaag atttccgtcg gcgcgccatt cttcaatgcc accttcgctc cgctattcgt
     1801 cccgctcctc atcgccgtgc cgtttgggcc gctgctggcc tggaagcgag gcgacgtgct
     1861 cggcgttgcc cagcgtctcg tcggcgccgc agccatcggc gtgatcaccg ttgcggtggt
     1921 gttcgcaatg gaaggcggcg gaccgatcct ggtgccgttc gcggtcggcc ttgcgctcta
     1981 cgtgatcgcc ggtgccttga tggaaatcgt ggagcgcacg ggtttgctca aggtgccggt
     2041 cgcgaccgcg tttgcccgcg ccaggggttt gccgcgctcg acctggggcg ccgcctttgc
     2101 gcatgccggg ctcggcatca cgctgctcgg cgtcatcggc gagacgcagt ggagcctcga
     2161 acgcatcgcc gagcttaaac ctgggcaatc gatctcgatc cggcgttacg atcttcattt
     2221 cgacggcgtg agcacgcgcc aggggccgaa ctaccgcgat cttgccgccc atttcaccgt
     2281 gcgccgccac ggcgaattca tcggtgtgat ggagccggcc aagcgcagct ttccttcgcg
     2341 cggcacagcc gtcacccaga ccgcgctgat gacgcgggga gtctcgcagc tctatttgtc
     2401 gctcggagat ccaaatcccg acggttcgct cgcggtgcgg ctctattaca aggcgctggt
     2461 tttgctcatc tggctcggcg ccgtggtgat ggtgatcggc ggtgcgctgt cgctctcgga
     2521 tcggcggctg cgcgtggggg cgccgaggcc ggcgcgaagc aaggccgccc tctccccggc
     2581 ggagtagggt cgctatgagg tcgctctgtc tcatcattgt cctgctcacg gttgccgccg
     2641 tgccgtgcgc gatcgccgtc gagcccgacg aagtgctctc ggatgccgcg ctcgaagcgc
     2701 gcgcccgcgc gctgtccaag gaattgcgct gcatggtgtg ccagaaccag tcgatcgacg
     2761 attcggaggc gccgcttgcg cgcgacttgc gcattctcgt gcgtgaacga ttgcaggcgg
     2821 gcgacagcga ccggcaggtc atcgactttc tggtcgcgcg ctacggcgag ttcgtgctgc
     2881 tcaggccgcg gttctcatgg cacactgcgg tgttgtggct tggtccggcg gcgatgctgc
     2941 tcattggagg atgcgccgtg ctggtgcttg tgcgccgcta tcggaccaat tccgctgccg
     3001 cagcgaacgg ccagcaggag ctcacggcgg cggaagcggc gcggctctcc gacattttgc
     3061 gcgacggcga gcgatgagct catgccgaat gggctaagtg cctgacggcc ttcgctcttc
     3121 cgccttttgc cgaccttacc aacttttaat ttccccgaca gcgcccggta aggaagcgat
     3181 ctccatcttg tctgcactcg gggtgctgat cggcccccca ccgcacaaaa cgatggagtt
     3241 actcttatga ctgcgagcgt tcccgctccg aaatcgcgca ccctctccgc gcgtcgtctc
     3301 gttctgctcg ccggcgttgc cggtctcggt gtgaccgtgc tgctcggcag tgcggggatt
     3361 ctcccccagc ctggcgcccc gctcagtgcg gtcgcgtatg cccaaggcgc cgagcgcccg
     3421 atgggatttg ctgacctcgt cgagaaggtg aagcccgccg tcatctccgt tcgtgtcaag
     3481 atggcgagcg gtcccaagat gatgggcttc gagggcgata cgcccattcc gccgaacgtc
     3541 gagcgtttct tccgtcgctt cggcctgccg gaaggcgcca cccccgagga acgacgcgct
     3601 ccgcgcgagc atttggtgac cggccagggt tccgggttct tcatcagcgc cgacggtttt
     3661 gcggtgacca acaaccacgt ggtcgacaag gcggagaccg tcgaggtgac cgccgatgac
     3721 ggcaagacat acaccgccaa ggtgatcggg accgatccgc gcaccgacat cgcgctgatc
     3781 aaggtcgatg gccgcagtga ctttccgtat gtgcgactcg ccgagaaggc tccgcgcgtc
     3841 ggcgactggg tactcgcggt cggcaatccg ttcggcctcg gcggcaccgt gacggcgggc
     3901 atcgtctcgg cgcgcgggcg cgacatcggt gccggtccc
//
LOCUS       DATCWM010000511         3940 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_489545, whole genome shotgun sequence.
ACCESSION   DATCWM010000511 DATCWM010000000
VERSION     DATCWM010000511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3940)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3940)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3940
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_489545"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..468)
                     /locus_tag="VIQ50_10010"
     CDS             complement(<1..468)
                     /locus_tag="VIQ50_10010"
                     /inference="COORDINATES: protein motif:HMM:NF018979.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HEY9360759.1"
                     /translation="MSTDSRGYWREEFSLIALLLLFFIAIVALSYHIPFDARLFPLLI
                     GSAGILLTLGIAAEQVCRRGARDGSTPHNEEHVISVDWPRYATALLSAPVFGLLFWLF
                     GFIIAALAAMLLMPVLMGYANRWRLVVIAIVTVAVLALIGPYLLHVDLPHGLVG"
     gene            complement(497..1477)
                     /locus_tag="VIQ50_10015"
     CDS             complement(497..1477)
                     /locus_tag="VIQ50_10015"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9360760.1"
                     /translation="MNGKPRINRRGFLRNLGSAAIGVAASASPLRSTTRAQERFPARE
                     INWIIYQAPGGSIDTTARIIQPYLEKNGVKTSLDYVLGAGGRVARTKLHTARPDGYLM
                     MTESAPGGAIDEVIGRAGYKASDFIAIYGWSVVSWQLCVKKDSPIQTFQQFVDECKKR
                     RVVVGTIGRSGSSHIQLAALQKELNLPFGMVHFEGSGKAYPAVMGGHVDAAISGPGSG
                     SRMRESLHFLAVTGEEREKALPEVPTLTELGFRVTPIDQIWYAMATPKVPDDRIAALS
                     SAFAKAFEDKTLWEQMQKAGEYLKLLTRPQVEAMVGKQAEVIEKYKDLLG"
     gene            complement(1499..2500)
                     /locus_tag="VIQ50_10020"
     CDS             complement(1499..2500)
                     /locus_tag="VIQ50_10020"
                     /inference="COORDINATES: protein motif:HMM:NF014476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360761.1"
                     /translation="MTDGKGVLFILYHDTLGLLGVEDALRICEEVYGMHARGSVVLSS
                     PPSFKLDVAQEFHNHWHVKSVLLKEVPTTGVRLYNYYDDGVRNTVGDLGCTRYIVLSD
                     PHRGEPVAIVDEHWSYAIRSAAAATLACKWLGPRHPSILGLVGVGTMGTNSLRCLCSM
                     YKFEEIRCTSRRAETRAAFARKWSQALGIAVVPMDSIEAVVRGADIVVGGTTSGEVVS
                     REPWLKRGSTFISLARRELDPAGWAKMDKVVVDSWEFNMLQREFKLAVESGLFSREQL
                     HAEIHELVSGAKKGRERDDERILIHTCGLVSQDVALAHFLYRNALGKGLGLWLPRAR"
     gene            complement(2529..2897)
                     /locus_tag="VIQ50_10025"
     CDS             complement(2529..2897)
                     /locus_tag="VIQ50_10025"
                     /inference="COORDINATES: protein motif:HMM:NF014376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY9360762.1"
                     /translation="MFKILHLNECPVGPMAGGRGEQVKLINQSLGTDKLDVHFNRLLA
                     GGSRGKRHHHTTADNVYIVKRGEGTLTVDGETHIIRENDVVYIPAGMVHSLANLSDDV
                     FEIFEIYAPAGARFDFVLDE"
     gene            3143..>3940
                     /locus_tag="VIQ50_10030"
     CDS             3143..>3940
                     /locus_tag="VIQ50_10030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEY9360763.1"
                     /translation="MSRAAAIARAHTYFDSGEFLVDLGRRVAIPSTSQEPERAPALRR
                     YLDEEMLPSLAPLGFASRVLDNPSGPPFLVAERMEEGAALTVLIYGHGDTVRGLDDSW
                     RAGLSPWVLTVEGKRIYGRGTADNKGQHSINIAALAAVIAERGRLGFNGKILLEMGEE
                     VGSAGLREFCVKHKDDLLRADLLIASDGPRAAPDRPTLFLGARGGHPIELIVDLREGA
                     HHSGNWGGLLANPGIILAHALACITDARGTIQVPEWRPPLPASVRRAL"
BASE COUNT          729 a         1280 c         1204 g          727 t
ORIGIN      
        1 gcccaccagg ccgtgcggaa ggtcgacgtg gagcagatag gggccgatga gcgcgaggac
       61 ggcgacggtc acgatcgcga tcacaacaag gcgccagcga ttcgcatatc ccatcaatac
      121 cggcatgagc agcatcgctg cgagcgcggc gatgatgaag ccgaacagcc agaacaacag
      181 cccgaagacc ggcgccgaca gaagcgcggt cgcatagcgc ggccaatcga cactgatcac
      241 gtgctcctcg ttgtgcggcg tcgaaccatc gcgcgcgccg cgtcggcaaa cttgctccgc
      301 ggcaattccg agcgtgagca ggatgccggc gctcccgatg aggagcggga agagacgtgc
      361 gtcgaatggg atgtggtagg agagcgcaac gatcgcaatg aagaacagaa ggagaagcgc
      421 aatcagggag aactcttcgc gccaataacc tctgctatcc gtcgacattc aatgactggc
      481 cttgcggcag ggcgcttcag cccaacaggt ccttgtactt ttcgatcacc tcggcctgtt
      541 tgccgaccat cgcctcgacc tgcgggcggg taagcaactt tagatattcg ccggccttct
      601 gcatctgctc ccacagagtt ttgtcctcga acgccttggc gaacgcgctc gacaacgcgg
      661 cgatgcgatc atcgggtacc ttgggcgtcg ccatggcgta ccaaatctga tcgatggggg
      721 tgacccgaaa ccccaattcc gtcagcgtgg gcacttcggg cagggccttc tcgcgctctt
      781 cgccggtgac cgcaagaaaa tgcaggctct cgcgcatgcg cgagccggat ccaggtccgc
      841 taatcgccgc gtcgacatga ccgcccatga ccgcaggata ggctttgccc gagccctcga
      901 aatgaaccat gccgaacggc aggttcaatt ccttctgcag ggcggcgagc tggatatggc
      961 tcgatcccga acgtccgatg gtgcccacga ccacgcgacg ctttttgcac tcatcgacga
     1021 attgctggaa ggtttgaatc ggcgagtctt tctttacgca aagttgccag ctcacgacgc
     1081 tccatccgta gatcgcgatg aagtcactcg ccttgtatcc cgcccgcccg atcacctcgt
     1141 cgatggcgcc gcctggcgcc gactccgtca tcatcaagta gccatctgga cgcgctgtat
     1201 ggagcttcgt gcgcgcaacg cggccgcccg cccccagcac atagtcaagg ctggtcttga
     1261 ccccattctt ttcgaggtaa ggttggatga tacgcgcggt cgtgtcgatc gagccgccgg
     1321 gcgcctgata gatgatccag ttgatctcgc gggcgggaaa cctctcctgc gcccgggtcg
     1381 tcgagcgcag cggactcgcc gacgccgcca cgccgatcgc ggcgctgccc aggttgcgca
     1441 agaaaccgcg tcgattgatc cgcggctttc cgttcatctc gttctccctc gcctctcctc
     1501 agcgcgccct cggcagccac aagcctaggc ccttcccgag cgcatttcga tacaagaagt
     1561 gtgccagcgc cacatcttgc gacacgaggc cacaagtgtg gatgagaatc cgttcgtcat
     1621 cgcgctcccg gcccttcttt gcgcccgata cgagttcgtg aatttcggcg tggagctgct
     1681 cgcgcgagaa caggcccgac tccaccgcaa gtttgaactc gcgctgcagc atgttgaact
     1741 cccagctgtc gacgacgacc ttgtccatct tcgcccagcc ggccggatcg agctcccgcc
     1801 gcgcgagcga gataaaggtc gagccgcgtt tgagccacgg ctcgcgactg acgacttcgc
     1861 ccgacgtggt gccgccgacc acgatgtcgg cgccccgcac gacggcttcg atcgaatcca
     1921 tgggcacgac cgcaattccg agcgcctgcg accatttgcg cgcgaacgcc gcgcgcgttt
     1981 ctgcccggcg cgaggtgcaa cggatttcct cgaacttgta catgctgcac aggcagcgca
     2041 gcgaattcgt ccccatcgtg ccgacgccga cgaggcccaa aatgctcggg tgtcttggac
     2101 caagccactt gcaggcgagc gtcgctgccg cagcgctgcg gatggcgtag ctccaatgct
     2161 cgtcgacgat tgcaaccggc tcgcccctat ggggatcgga cagcacgatg taacgcgtgc
     2221 agccgagatc gccgaccgtg ttacgcacac cgtcgtcgta gtagttgtaa agccgaaccc
     2281 cggttgtggg gacctctttc agcaatacgg acttcacgtg ccaatgatta tggaactcct
     2341 gcgccacgtc gagcttgaag cttggcggcg acgacaacac cacgctgccg cgggcgtgca
     2401 tgccataaac ttcctcgcag atgcgtagcg catcctcgac gccgagcaag ccgagcgtgt
     2461 cgtggtagag gataaacagg acgcctttgc cgtcggtcat gtgtcgttta gccgatgagt
     2521 ttggcctttc actcatccag tacgaaatcg aatcgcgctc cggccggcgc gtagatttcg
     2581 aaaatctcga atacgtcgtc gctcagattg gctagtgaat ggaccatgcc ggcgggaata
     2641 tagaccacgt cgttctcgcg gatgatgtgg gtctctccgt cgaccgtaag cgtgccctcg
     2701 ccgcgcttga cgatatagac gttgtcggcg gtggtgtggt gatgccgctt gccgcgcgat
     2761 ccgccggcca gcaaccggtt gaaatgcacg tcgagcttat ccgtgccgag gctttgattg
     2821 atcaacttga cctgctcgcc ccgtcccccc gccatcggac cgaccggaca ttcgttcaaa
     2881 tgcaggattt tgaacacgcg cgatctccct tagcggtccc ggtgaaacgg gaatcggtcc
     2941 accgtaggaa acacgtggat ggctgtcctt gccgcggcgt cggtcgacat gcaatatccg
     3001 cgcgaccgta attgggcctt gcgaccaact caagcggcga gccgtgaacg tgggggagcg
     3061 ccaagttgaa tttcaacgag cgatgcacgc gtcgtcatgc ggcgcgcagg cggggcagcc
     3121 cgcagcgacg agggctgaca gcatgagccg cgccgccgcc atcgcccgcg cccacacata
     3181 tttcgacagc ggcgaatttc tcgtcgatct ggggcggcgg gtcgccatcc ccagcacgag
     3241 tcaggagccg gaacgcgctc ccgcgctgcg ccgctatctc gacgaggaga tgctgccgag
     3301 tctcgctccg ctcggatttg cctcgcgtgt tctcgacaac ccgtcgggcc ctcctttctt
     3361 ggtggcggag cgcatggagg agggcgccgc gttgaccgtg ctgatctacg gccacggaga
     3421 taccgttcgc ggccttgacg actcgtggcg tgctgggctg tcgccctggg tgctcaccgt
     3481 cgagggcaag cgcatctatg gccgcggcac ggccgacaac aagggccaac acagcatcaa
     3541 catcgccgcg ctcgcggcgg tgatcgccga gcggggccgt ctcggtttca atgggaagat
     3601 tctcctcgag atgggggagg aagtcggctc cgccggattg cgcgagtttt gcgtcaagca
     3661 caaagacgac ctgctgcggg cagacttgct gatcgcgtca gacggtccgc gagctgcacc
     3721 ggatcgaccg acgctctttc tcggcgcgcg cggcggccac ccgatcgagc tcatcgtcga
     3781 tctgcgcgag ggcgcccatc attccggcaa ctggggcggt ctactcgcca accccggcat
     3841 cattctcgcg cacgcgctgg cctgcatcac cgatgcacgc ggcaccatcc aggtgccgga
     3901 atggcggcca ccgctgccgg cgtcggtgcg gcgcgcgctt
//
LOCUS       DATCWM010000512         3358 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_203621, whole genome shotgun sequence.
ACCESSION   DATCWM010000512 DATCWM010000000
VERSION     DATCWM010000512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3358
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203621"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..202)
                     /locus_tag="VIQ50_10035"
     CDS             complement(<1..202)
                     /locus_tag="VIQ50_10035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007601027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360764.1"
                     /translation="MDIFLFEAAINGLLLAGVLALLTLGLNLIFGVIDVVWIAYADLV
                     MCGMYAVYWLFAVFGWPLPLAFA"
     gene            complement(208..912)
                     /locus_tag="VIQ50_10040"
     CDS             complement(208..912)
                     /locus_tag="VIQ50_10040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012043036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9360765.1"
                     /translation="MLSLVDVSAGYGSFRALFGVSLEIAAGETVGVIGPNGAGKTTLM
                     RVISGLVAAFAGGVSFDGRSIVGVPAHRIVARGIAHVPENRRLFPKLSVEDNLRIGAF
                     VPAARRHFAEQLAWVYQLFPQLRERRTQPAGTLSGGEQQMCAIGRALMSRPRLLLMDE
                     PSAGLAPLVVQELFELIRRIRAEGLTVLIVEQNIQHVLEVVDRAYLLEVGAIRLAGTS
                     TELKNNEFIRKAYMGL"
     gene            complement(919..1638)
                     /locus_tag="VIQ50_10045"
     CDS             complement(919..1638)
                     /locus_tag="VIQ50_10045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9360766.1"
                     /translation="MLVVTDLSRRFGGFLAVNRVSFEVREGEIVGLIGPNGSGKSTTF
                     NLVAGALRPTAGSIRFCGHDITGLPSHKIRHRGIARTFQIPRPFRKLSLVDNVMLAAY
                     YGEAGGIGREEARRRAEESLELVGLPSGTATTAGLGAAALKKLELARALATRPKLLLA
                     DESLGGLDTAEMERAADLLAHIRSRMGITIVWVEHIMGVLMRVVGRVIVLDHGEKIFD
                     GLPAEAARNARVAKVYLGRRA"
     gene            complement(1641..2960)
                     /locus_tag="VIQ50_10050"
     CDS             complement(1641..2960)
                     /locus_tag="VIQ50_10050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9360767.1"
                     /translation="MAAVTSRRSLLKNSAATLAAAGLGSKVVRAQDAPIRIGVIYDLS
                     GPFAAAGSVASAIGAQAAIDIVNERGGVAGKYKVQPINADSQSKADAAINEVERLINQ
                     EKVEIVLGVYASAHAVPLAAKVEAQKKILWITTAVATSVFKDQNRQYVFRTQIHSDQY
                     GQAFAAFVADNAKARLGVEPKAVKVAILHEDGPYGVGVAQATEQFGKERGLQLVLREG
                     YSSSAPDLSSLVTKLKRAGADVISHCGYNPDITLFLRQAREAGLRFKMLVGNGAGYSQ
                     LDKLRATFGKDVDNFCNIDPVPAQLLNPASLAPGLGDLTKMMVERYKAKTNATDVPPH
                     CSMGFNQTWILLNSVLPIAKEKYSGFDAEAVRKAALYVDIPPGGTIQGYGVKFYPPGT
                     QLSGQNERSTPVVMQNAGEHISVVWPENIKTQEPVLPLPASSIYAMR"
BASE COUNT          645 a         1042 c         1046 g          625 t
ORIGIN      
        1 cggcaaacgc cagaggaagc ggccagccga agacggcaaa cagccagtaa accgcgtaca
       61 tgccgcacat gacgagatcg gcataggcga tccagaccac gtcgattacg ccgaagatca
      121 ggttcaatcc gagggtgagc aacgccagga cgcccgcgag cagcaggcca ttgatcgccg
      181 cctcgaacag gaagatgtcc atccccgcta gagccccata taggccttgc gaatgaattc
      241 gttgttcttc agctctgtcg acgtgcccgc caagcgaatg gcgccgacct cgagcagata
      301 ggcgcgatcg accacctcga gcacgtgctg gatgttttgt tcgacgatga gaaccgtgag
      361 cccttcggcg cgaatgcgcc ggatcagctc gaacagttcc tgcacgacca gcggagcaag
      421 acccgcggat ggctcatcca tcaacaggag cctcggccgc gacatgagcg cgcggccaat
      481 cgcgcacatc tgctgctcgc cgccggagag cgtgccggcg ggctgagttc gtcgctctcg
      541 aagctgcgga aagagctgat agacccaagc aagttgttcg gcaaaatggc gccgcgccgc
      601 cgggacgaag gcgccgatcc tcaggttgtc ctccacgctg agcttgggaa acaaacgccg
      661 gttctcggga acgtgagcaa ttccgcgcgc aacgatgcgg tgtgcgggaa caccgacgat
      721 tgatcgccca tcgaaactga cgccgccggc aaacgctgcg acgagcccgg atatgactcg
      781 catcaaggtg gtcttgccgg cgccgttggg gccgatgacg ccgaccgtct cgcctgccgc
      841 aatctcgagc gataccccga acaacgcgcg gaacgagccg tagccggcgg aaacgtcgac
      901 gagcgacagc atgtccgctt aagcccgcct gccgaggtag accttcgcca cgcgtgcatt
      961 gcgtgcggct tcggccggca gtccatcgaa aattttctca ccatgatcga gaacgatgac
     1021 gcgcccgacg acccgcatga gcactcccat gatgtgctcg acccaaacga tggtgatccc
     1081 catgcggctg cggatgtgcg cgagcaggtc ggcggcacgt tccatctcgg cggtatcgag
     1141 gccgcccagg ctttcgtcgg ccaagagcaa cttcggccgc gtggcgagcg cgcgcgccag
     1201 ttccagcttc ttgagcgccg cagcgccaag cccggcggtc gtggcagtgc cactcgggag
     1261 accgacgagt tcgagcgatt cctcggcccg ccgccgcgcc tcctctcggc cgatcccgcc
     1321 tgcttcgccg tagtaggccg cgagcatgac gttgtcgacg agcgagagct tgcggaacgg
     1381 gcgcgggatc tggaacgtgc gggcaattcc ccgatggcgg atcttatggg atggcaggcc
     1441 ggtaatgtcg tggccgcaaa accggatgga tccggcagtg ggacgcagcg caccggcaac
     1501 gagattgaac gtcgtactct tgcccgatcc attcggtccg atgagcccga cgatttcgcc
     1561 ttcccggact tcaaaggaga cgcggttgac cgcgagaaac cccccgaagc gccgggaaag
     1621 atcggtgaca accaacatcg tcagcgcatg gcataaatcg atgaggcggg cagcggcagg
     1681 accggttcct gggtcttgat attttcgggc caaacgacgg agatatgctc gccggcattc
     1741 tgcatcacca cgggcgtcga gcgctcgttt tggccggaga gttgggttcc gggcgggtag
     1801 aacttcactc cgtagccctg aatggtgccg ccgggcggga tatccacgta gagcgcggct
     1861 ttgcgcaccg cctccgcgtc gaagccgcta tacttctcct tggcgatggg cagcacgcta
     1921 ttgagcagga tccaggtctg attgaatccc atcgagcaat gcggcggcac gtcggtcgcg
     1981 ttggtcttgg ccttgtaacg ctcgaccatc atcttcgtga gatcgcccag gccgggcgcg
     2041 agcgatgcgg gattgagcag ttgcgcgggg accggatcga tattgcagaa attgtcgacg
     2101 tctttgccga aggtagcgcg cagcttgtcg agttggctgt agccggcgcc gttgccgacc
     2161 aacatcttga agcgcagccc ggcttcgcgg gcttgccgca ggaataaggt gatgtcgggg
     2221 ttatacccgc aatgggatat gacatcggcc ccggcgcgct tgagcttcgt caccagcgaa
     2281 gagaggtcgg gcgcgctcga cgaatagcct tcccgcagca cgagctgcaa gccgcgttcc
     2341 ttgccgaatt gctccgtcgc ctgcgctacg cccaccccgt agggcccgtc ctcgtgcaag
     2401 atggcgactt tgacagcctt tggctcgacc ccgagcctcg ctttggcgtt gtccgcgaca
     2461 aatgccgcga aagcttgacc atactgatcg gagtgaatct gggtgcggaa cacgtattgg
     2521 cgattttggt ccttgaacac cgaagttgct accgccgtgg tgatccaaag aatcttcttc
     2581 tgcgcctcga ccttggcggc gagcggcacg gcgtgcgcgc tggcatatac gccgagcacg
     2641 atttcgacct tctcctgatt gatcagccgc tcaacctcgt tgatggcagc atccgccttg
     2701 ctttgcgaat cggcattgat cggctgcacc ttgtatttgc cggcgacccc accccgttcg
     2761 ttgacgatgt cgatcgcggc ttgcgcaccg atcgcactgg caaccgaccc tgctgccgcg
     2821 aagggcccgg aaagatcata aatgacgccg atccggatcg gcgcgtcctg cgcgcgaaca
     2881 accttgctgc cgagaccggc tgccgcgagg gtcgcggccg agttcttaag gagcgatctg
     2941 cgcgacgtta ctgctgccat gatgatctcc ctatggaatg ctccgcgccg gtcgcgacgc
     3001 cgcagctttt taggggagta tttgaagaac ctcttgcgga gtcaacgcgc ccgtcagaga
     3061 ccggccagcc cccgagcacg gaccgacccg tccggaaccc attgcacatg cggttgagga
     3121 ggtccggctg cgttctttcg gcaaggcctt gttcggccta gaccccggaa agcggttttt
     3181 tgtgatggcc atcacgtcct ttagttcggg gccggcctaa gatgtgccca tagtctagat
     3241 gtgggggatg ccatgacgat ggtgggcgcg agggctagat ccttcggcag cctgagtgtc
     3301 ggagtgttcc aacaataatg cacgttcacg ttcaaactct ctcatttttt catccaag
//
LOCUS       DATCWM010000513         2110 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_284428, whole genome shotgun sequence.
ACCESSION   DATCWM010000513 DATCWM010000000
VERSION     DATCWM010000513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2110
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_284428"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..731
                     /locus_tag="VIQ50_10055"
     CDS             <1..731
                     /locus_tag="VIQ50_10055"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HEY9360768.1"
                     /translation="GVKIIAIPKTMDNDVHNTEYCIGFSTAITRASDAIQRQRTTVAS
                     HERIGIFRVFGRDAGFTALFTAHTTSIRCVVPEYKVNLDKLIRLLTEDKRANSSNYAL
                     IVLSEGAEWEGYQVRKYGEPDAYGHRKKASVAESLADEIKWRTGEETMTSDLTYDLRS
                     GEPDFVDKLVALTFGNMAYDAMLDGKTGLMSALVNGRYELVPIPDPVLGPRKVDVATM
                     YNTERYRPMYANKRGLSVFLQRAS"
     gene            750..1937
                     /locus_tag="VIQ50_10060"
     CDS             750..1937
                     /locus_tag="VIQ50_10060"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009799008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEY9360769.1"
                     /translation="MFRTLDEADLRGKRVLVRVDLNVPVENGKVADTTRIERVAPTIR
                     EIADKGGKVILLSHFGRPKGPDPKQSLKPFAPAIAAVLKRPVAFAEDCIGERAAAAVN
                     AMKSGDILCLENTRFHPGEERNDPAFVAQLAALGDIFVNDAFSVAHRAHASVEGIGHR
                     LPAYAGRTMQDELEALTKVLQSPTRPLAAIVGGAKVSTKLDLLGNLLAKVDTLIIGGG
                     MANTFLAARGYSVGKSLCERDLLPTAREIMAQAKAKGREFVLPVDAVVAKTFAANVPS
                     RVVAVDSVGSDEMILDIGPRSIEHVCSVLARVKTLVWNGPFGAFELEPFDIGTVEVAE
                     AAAELTAAGKIITVAGGGDTVAALNAAGAAGRFTYVSTAGGAFLEWLEGKPLPGVEVL
                     RVR"
BASE COUNT          404 a          661 c          683 g          362 t
ORIGIN      
        1 tcggcgtcaa gattattgcc attccgaaga cgatggataa cgatgttcat aacaccgagt
       61 actgcatcgg cttttcgacc gcgatcaccc gcgccagcga cgccatccag cgccagcgga
      121 ccacggtcgc ctcgcacgag cgaatcggca ttttccgcgt cttcggccgc gatgccggct
      181 ttacggcgct cttcacggcg cacaccacct cgatccgctg cgttgttccc gaatacaaag
      241 tcaacctcga caagctcatc cggctgctca cggaggacaa gcgcgcaaac tcgagcaact
      301 atgcgctgat tgtgctcagc gagggcgccg agtgggaggg ctaccaagtg cgcaaatacg
      361 gcgaaccgga cgcatacggt caccgtaaga aggcgagcgt ggccgagtcg cttgccgacg
      421 agatcaagtg gcgcaccggc gaggaaacga tgacgtctga cctcacctac gatctgcgct
      481 cgggcgagcc cgacttcgtc gacaagctag tagctttgac gttcggcaac atggcatacg
      541 atgccatgtt ggatggcaag accggcctta tgtcggcgct agtaaatggc cgatacgagc
      601 tggtgccgat ccctgatccc gtgctcgggc cgcgcaaggt ggacgtcgcc accatgtaca
      661 atactgagcg gtaccgcccc atgtacgcca acaaacgggg gctttcggtc tttctgcagc
      721 gcgcgtcgta gcgcaggaag agcaccgaca tgttccgcac gctcgatgag gccgacctga
      781 ggggcaagcg cgtgctcgtg cgcgtcgatc tcaacgtgcc ggtcgagaac ggcaaggtgg
      841 cggacacgac ccgtatcgag cgcgttgctc cgaccatccg cgagattgcc gacaagggcg
      901 gcaaggtgat tttgctctcc catttcgggc gcccgaaagg gcccgatcca aagcaatcgc
      961 tcaagccgtt cgcgccggcg attgcggccg tgcttaagcg gccggttgcg ttcgcggagg
     1021 attgcatcgg cgaacgggcg gcagcggcag tgaacgctat gaagtcgggc gacatcctgt
     1081 gcctggagaa cacccgcttc catccgggcg aggagcgcaa cgatcccgcc ttcgtcgcgc
     1141 aactcgctgc gctcggcgac atcttcgtca acgacgcctt ctcggtggcg caccgcgccc
     1201 atgcctcggt cgagggcatc ggtcacaggc tgccggccta cgcggggcgc accatgcagg
     1261 atgaactcga ggcgctcacg aaagtattgc aaagcccgac ccgtccgctc gcggcgatcg
     1321 tcggcggagc caaggtgtcg accaagcttg acctgctcgg caacctgctg gcaaaggtcg
     1381 acactctcat catcggcggc ggcatggcca acacgtttct ggccgcgcgc ggatattcgg
     1441 tgggtaagtc gctgtgcgag cgcgatctcc tgccgaccgc acgcgagatc atggcccaag
     1501 cgaaggccaa aggccgcgag ttcgtattgc cggtcgacgc cgtggttgcc aagaccttcg
     1561 ccgccaacgt gccctcgcgc gtggtcgcgg tggacagcgt gggcagcgat gagatgattt
     1621 tggacatcgg cccgcgcagc atcgagcatg tctgctccgt gctcgcgcgg gtcaagacgc
     1681 tggtctggaa cgggccgttc ggggccttcg agctcgagcc tttcgatatc ggcacggtcg
     1741 aggtcgccga agccgcggcg gaactcaccg ccgccgggaa gattattacg gtggcaggcg
     1801 gcggtgacac ggtcgcggcg ctcaatgccg ccggcgcggc cgggcggttc acctatgtct
     1861 cgaccgctgg cggcgccttc ctcgaatggc tggagggcaa gccgttgccg ggggtcgagg
     1921 tgcttagggt cagataacgg tcggccgtga agaaaggcgc gccagaaaac cagcgacagt
     1981 gccgtaaaca tcaagaaaga cttggatcat gaaccttccc cgcgagctcg ttgctatgcc
     2041 cgacagatgt ccggggtaat cggcggccgg gacttgccac gacgcacggg gttagggcgc
     2101 atcatgacca
//
LOCUS       DATCWM010000514        10807 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_90141, whole genome shotgun sequence.
ACCESSION   DATCWM010000514 DATCWM010000000
VERSION     DATCWM010000514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10807)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10807)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10807
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90141"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1259
                     /locus_tag="VIQ50_10065"
     CDS             <1..1259
                     /locus_tag="VIQ50_10065"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009026364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cisplatin damage response ATP-dependent DNA
                     ligase"
                     /protein_id="HEY9360770.1"
                     /translation="IGVSARLAKTAAAALGDKDPQEVELIWPAMRPPYLELFAWLEGR
                     GDKPTSRDPAPFRPPMLAHAVEERDLGALDPKDFLGEWKWDGIRVQAVAGTGEDGRSV
                     ARLYSRTGEDISASFPDLTGSLRLAGAIDGELLIMREGRVQSFNVLQQRLNRKTVSTK
                     LLADFPAHLRAYDLLVDGVEDLRERPFAERRARLEQFVVRLDDARVDLSPLIAFVTWE
                     DLIAARANPAAGGAGADADAVEGIMLKRRDVPYVPGRPRGLWWKWKRDPFIVDAVLIY
                     AQRGHGKRSSYYSDYTFGVWTKGEEGEVLVPVGKAYFGFTDEELLQIDRFVRRNTVER
                     FGPVREVVHEAERGLVLEVAFEGLQRSTRHKSGLAMRFPRINRLRWDKRPADADRLET
                     LERILETIERGRAAPDAANQRDRILS"
     gene            1256..1549
                     /locus_tag="VIQ50_10070"
     CDS             1256..1549
                     /locus_tag="VIQ50_10070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6460 domain-containing protein"
                     /protein_id="HEY9360771.1"
                     /translation="MNTPTQRESNYVNRFFGGPPLSVIFRLILLSILIGVILQVLGLD
                     PWNIFDSLRRLVLHVWDMGFDALRWLWRYLLLGAVIVVPIWLIVRLMRVAQDR"
     gene            complement(1601..2695)
                     /locus_tag="VIQ50_10075"
     CDS             complement(1601..2695)
                     /locus_tag="VIQ50_10075"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HEY9360772.1"
                     /translation="MIGLLESLARPLLRMLDAEDAHRLAINALKIPPFVKLVAEDSKL
                     AVRAFGLNFPNPVGMAAGFDKHAEVPDALLKLGFGFVEVGTVTPSPQSGNPRPRVFRL
                     DRDEGVINRLGFNSEGAAAVLRRLAARADNGGIVGVNIGANRDSTDRIADYVRLIETF
                     APVASYFSVNISSPNTPGLRDLQQGKMLDDLLGRIVDARTRVSREAGTTPVLIKIAPD
                     LSLGDLDDVVAAARRHRVDGMIVGNTTVARPQALRDRATARESGGLSGRPLFALATRM
                     LGETYVRVEGAFALVGAGGIDSGEAALAKIRAGACLIELYSALVFHGLRLVAAIKSEL
                     SDALRREGRTSIDELVGTDAAAITAQPWPI"
     gene            complement(2692..3036)
                     /locus_tag="VIQ50_10080"
     CDS             complement(2692..3036)
                     /locus_tag="VIQ50_10080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF952 domain-containing protein"
                     /protein_id="HEY9360773.1"
                     /translation="MATIYKICAEALWRQAEREGIFRGAPVDARDGFIHFSSGAQVRE
                     TAAEYFAGLENLLLIAVDADALGEALRWEVSRGGELFPHLYGDLPLAVVRWVKPLPLG
                     TDQRHIFPELTP"
     gene            3445..3843
                     /locus_tag="VIQ50_10085"
     CDS             3445..3843
                     /locus_tag="VIQ50_10085"
                     /inference="COORDINATES: protein motif:HMM:NF042760.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HEY9360774.1"
                     /translation="MVLACIDPRMQEPVHRYTVEQNLTGKFSQFVIAGAAIGVVAPAF
                     QDWHKAFWDNLATTIQLHRIKKVIAIDHRDCGAAKIAYGEAKVATPQAETETHRAALA
                     EFRKQVGERHPQLGVQTGLMALDGKMEMFS"
     gene            complement(3875..4618)
                     /locus_tag="VIQ50_10090"
     CDS             complement(3875..4618)
                     /locus_tag="VIQ50_10090"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEY9360775.1"
                     /translation="MAPSVLALLGATIVFTSFLSGVFGMAGGMILLGVLLNYFDVATG
                     MILFSIIQLFANGWRALQWRRYVLWPIFGWYVVGAAISFAGMWMIAFVPDKAMVFLTL
                     GLMPFAIEALPAAARPNIEWRGVPFLTGVATTVIQILAGVGGMFLDIFFQKSMLDRKT
                     TNATKAVTQSFSHVVRAVYFGSLSGIGDVPLWATGPAILLAIGGTSLAPFVIERMTDH
                     GFRQWTRVVIFAISVVYLVRAGFLIWHRS"
     gene            complement(4629..6272)
                     /locus_tag="VIQ50_10095"
     CDS             complement(4629..6272)
                     /locus_tag="VIQ50_10095"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006615236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HEY9360776.1"
                     /translation="MSTPEAQVPALREIAENSNAWPFQEARKIVVRLKKHRKDEVVFE
                     TGYGPSGLPHIGTFGEVARTTMVRHAFRVLTEDKIKTRLIAFSDDMDGLRKVPDNVPN
                     REMMAQHLGKPLTRVPDPFSNEYPSFGAANNARLRAFLDQFGFEYEFLSSTECYTSGR
                     FDATLLRVLERFDTVMNIMLPSLREERAQTYSPFLPISPRTGIVLQVPILAHDAGAGT
                     ITYEDPDSKERVTTLITGGRAKLQWKPDWAMRWLALGVDYEMAGKDLIDSVKLSGEVS
                     RALGGTPPEGFNYELFLDEKGQKISKSKGNGLTIDEWLRYASPESLSLFMYREPRAAK
                     RLYFDVIPRHVDEYQQFLEAYERQDLKQQLSNPVWHIHAGSPPKPDMPISFSMLLTLV
                     ASSNAENAETLWGFIGRYRPGVTPQTHPKFDALVRYAIHYFRDFVLPQKRFREPSESE
                     RAALLDLREALAQLPADASAEDIQQVVYEVGRREPFLDKTGKIKTKDGKPGVALDWFN
                     MLYQVLLGQEKGPRFGSFVALYGLNNAIDMIDGALARSA"
     gene            complement(6418..6582)
                     /locus_tag="VIQ50_10100"
     CDS             complement(6418..6582)
                     /locus_tag="VIQ50_10100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp family type IVb pilin"
                     /protein_id="HEY9360777.1"
                     /translation="MRVLLARFLCEESGTTAIGYALIAAGMAVAIITVLSGLGSKLSM
                     ALTTVRAALD"
     gene            complement(6790..7599)
                     /locus_tag="VIQ50_10105"
     CDS             complement(6790..7599)
                     /locus_tag="VIQ50_10105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008136489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEY9360778.1"
                     /translation="MAEPAPTAGATPAPPPVRVPGFWDPRRRPEKPDLARISVIRFLT
                     ETDYPPFNYAGPDGNPQGFNIDLARMLCEELKLACTIQMRRFETLIPALNGNQGDAAI
                     ASITATLDIRTRVDFTDPYYRTPARFVARRDSAIEDPLPERLEGKKVGVVGGTAHEAY
                     LKTLFTEAEIRAYPTDEAARAALRGGEVDLLFGDAITLAFWLNGTDSENCCAFRGGPY
                     IDSRYFGEGVGIAVKKGNDTMRMALNWALFRVWEQGRFTDLWLRYFPLSPF"
     gene            complement(7833..8429)
                     /locus_tag="VIQ50_10110"
     CDS             complement(7833..8429)
                     /locus_tag="VIQ50_10110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008136487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031966 - mitochondrial membrane
                     [Evidence IEA];
                     GO_process: GO:0033617 - mitochondrial cytochrome c
                     oxidase assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HEY9360779.1"
                     /translation="MTARNSRILLMAAAFVAGLALCFGVVLILAGRLSSPVAQQIAAI
                     GGPFKLTDQNGQVVTDQDLKGHPFLVFFGFTHCPDVCPTTLFEVSEILRALGPDVDRA
                     RALFITVDPERDTPAVMKDYLSSFDPHLSGLTGDPAEITAVAKAYRVYFKKVPLDEGY
                     TMDHTAIVYLMDKTGRFVSPFNIKRPTDVAVADLRRYL"
     gene            complement(8458..8622)
                     /locus_tag="VIQ50_10115"
     CDS             complement(8458..8622)
                     /locus_tag="VIQ50_10115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360780.1"
                     /translation="MPETASATTSLLSRPLMLLAAAVAILLAGTLALWAHYGTAVFYE
                     MIVAGIAACL"
     gene            9267..9581
                     /locus_tag="VIQ50_10120"
     CDS             9267..9581
                     /locus_tag="VIQ50_10120"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360781.1"
                     /translation="MAKKGKSPHSSAAREAFEEAGVLGAVAKRPVGSFSYQKRLKSGA
                     VVLCDVHVFPLEVRRQSKQWPEKQERVIKWLSGSQAAEKVDEPMLSEIIRRLARKYNG
                     RH"
     gene            complement(9910..10398)
                     /locus_tag="VIQ50_10125"
     CDS             complement(9910..10398)
                     /locus_tag="VIQ50_10125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017485168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin-like domain-containing protein"
                     /protein_id="HEY9360782.1"
                     /translation="MSAFKCLVAVVGWLVAAQPSFADDREKVIGIWKLVSQEIEIQAS
                     GQKEPVMGRSPTGYAIFTPEGRVMFVLTGEGRKPPQTVQDRADLLNSMAAYTGMYRLE
                     GDKWITQVDVAWNPEWVGTEQTRFFKLDGDRLHVTSTWRIMPNWADKGMQRSLLVFEK
                     TK"
BASE COUNT         2059 a         3409 c         3422 g         1917 t
ORIGIN      
        1 ggatcggcgt ctccgcgcgt ctcgcgaaga ccgcagccgc cgcgctcggc gacaaagatc
       61 cgcaagaggt cgaactgatc tggcccgcca tgcggccgcc ctatctcgaa ctgttcgcct
      121 ggctggaagg ccgcggcgac aagccgacga gccgcgaccc cgctccgttc cggccgccga
      181 tgctcgccca tgcggtcgag gagcgcgatc tcggcgcgct cgatcccaag gattttttgg
      241 gcgaatggaa atgggacggc attcgcgtcc aggccgtcgc cggcacgggt gaggacggca
      301 ggtccgttgc gcggctttac tcgcgcaccg gcgaggatat ttcggctagc tttcccgacc
      361 tgaccggttc cttgcggtta gcgggcgcaa tcgacggcga actcctgatc atgcgcgagg
      421 gacgcgtgca aagcttcaac gtgctgcagc agcggctcaa tcgcaagacg gtaagcacca
      481 aactgctggc cgattttccc gcccatctgc gcgcctacga tctcctggtc gacggcgtgg
      541 aagacctgcg cgagcgtcct ttcgccgagc ggcgggcgcg gctcgaacag ttcgtcgtcc
      601 gcttggacga tgcgcgcgtc gatctctcgc cgctgatcgc gttcgtcact tgggaggatc
      661 ttatcgcggc gcgggcgaac ccggccgcgg gcggcgcagg cgccgatgcc gatgcggtcg
      721 agggcatcat gctcaagcgg cgcgatgtgc cctatgtccc cggccgtccc aggggcctct
      781 ggtggaagtg gaagcgcgat ccgttcatcg tcgacgccgt gctgatctac gcccagcgcg
      841 gccatggcaa gcgctcgtcc tactactccg actatacttt cggggtctgg accaagggcg
      901 aagagggcga ggtgctggtg ccggtgggca aggcatattt cggtttcacc gacgaggagc
      961 tccttcagat cgaccgcttc gtccgccgca acacggtaga gcggttcggc ccggtacgcg
     1021 aagtggtgca cgaggccgag cgcggcctgg tgctcgaggt ggcgttcgag ggattgcagc
     1081 gctcgacgcg acacaaatcg ggccttgcga tgcgctttcc ccgcatcaac cgactacgct
     1141 gggacaagcg gcccgccgac gccgatcggc tggaaacgct ggagcgaatt ctggaaacga
     1201 tcgagcgcgg gcgcgccgcg cccgacgccg cgaatcaacg tgataggata ttgtcatgaa
     1261 cacgccgacg cagcgggaga gcaactacgt caaccggttc tttggcggtc cgcctttatc
     1321 ggtcatcttc cggctgatcc tgctgtccat cctgatcggc gtgatcctgc aagtgctcgg
     1381 gctcgaccca tggaatatct tcgatagcct gaggcggctc gtgctgcacg tttgggacat
     1441 gggctttgac gccctgcgtt ggctgtggcg ctatctgctg ctcggcgctg tcatagtggt
     1501 gccgatctgg ctgatcgttc ggctcatgcg ggtggcccaa gaccggtaag cgcctaaacg
     1561 tcatgcgaga cttcggggag ttcggtgcac gaaccgctcg ttagatcggc cacggttgcg
     1621 cggtgatcgc cgccgcatcc gtcccgacaa gctcgtcgat gctcgtgcgt ccctcccggc
     1681 gcagtgcatc cgacagctcg gatttgatgg ccgcgaccag ccgcagcccg tggaacacca
     1741 gcgcgctgta gagctcgatc aagcacgcgc ccgccctgat tttcgcaagc gccgcctcgc
     1801 ccgagtcgat gccgcccgcg cccacgagcg caaacgctcc ttcgacccgc acgtaggtct
     1861 cccccagcat ccgcgtcgcc agcgcgaaca gcggccgccc cgacagccct ccagattccc
     1921 gcgccgtggc gcgatcgcgc aacgcctgcg gccgcgcgac ggtggtatta ccgacaatca
     1981 tgccgtcgac ccggtgcctg cgcgccgccg ccacgacgtc gtcgaggtcg ccgagcgaaa
     2041 gatccggcgc gatcttgatc aacacagggg tcgtcccggc ctctctgctc acgcgggtgc
     2101 gcgcatccac gatgcgtcct agcagatcgt cgagcatctt gccctgctga aggtcgcgca
     2161 gcccgggagt gttgggcgag gagatgttga cggaaaaata gctcgccacc ggagcaaagg
     2221 tttcgatcag ccgtacataa tccgcgatgc gatcggtgct gtccctgttg gcgccgatgt
     2281 tgacgccgac aatgccgccg ttgtcggcgc gcgcagcgag gcgccgcagc acggcggcgg
     2341 caccctcgct gttgaaaccc agccgattga tcacgccctc gtcgcgatcg aggcgaaaca
     2401 cgcgtgggcg cgggtttccc gactgcggcg aaggcgtgac ggtgccgacc tcgacgaagc
     2461 cgaaaccgag cttgagcagc gcgtcgggaa cctccgcatg cttgtcgaag cccgccgcca
     2521 tgccgaccgg attgggaaag ttgagcccga aagcccgcac tgccaatttc gaatcctcgg
     2581 caaccagctt gacgaacggc gggatcttta gcgcattgat cgcaagccga tgcgcgtcct
     2641 cggcatcgag catgcgcagc aacggccgcg ccagcgattc gagaagcccg atcacggcgt
     2701 aagctccgga aagatgtgcc gttgatcggt ccccagaggc agcggcttaa cccatcgcac
     2761 cacggcgagc ggcaaatcgc cgtaaagatg cggaaacaat tcgccgccgc gcgacacctc
     2821 ccatctcagc gcttcgccga gcgcgtccgc gtcgaccgcg atcagcagca aattctcgag
     2881 cccggcaaaa tactcggcgg cggtttcgcg gacctgcgcg ccggaggaga aatggatgaa
     2941 gccgtctcgc gcatcgacgg gcgcaccgcg gaagataccc tcccgctcgg cctgacgcca
     3001 aagcgcctcc gcacagatct tataaatggt cgccacggtg cggtcccacg aactttgctt
     3061 gtaattagtt ctaacctcat aagctgttgg agggcgagag gctacaactc ggtactgcac
     3121 aactccggtg gcgctccagg cgggtcgatg tcggctcgag agggcccgcc cgcggcgctt
     3181 gcgacaaggc gcgtgccttg tgatactgct gcgtgccttg tcggcccgtg tgcctgggac
     3241 cgatatcttc cgccaagcgc gactagcgtg ccgccgtcaa aagagaggga caatggcaaa
     3301 attgcatgag gctttctgcg cgtgctgcag cggtattacg gccatattcc atcgccgaga
     3361 gtttctgcgc gccatgggaa tcggtggcgc cgctctcgcc ttcgctccag atgtcgcgca
     3421 cgcgccgaag gggagtacga ggcgatggtt ttggcctgca tcgatcctcg catgcaggaa
     3481 ccggtgcacc gatatacggt cgagcagaac ctgaccggca agttcagcca gttcgtcatc
     3541 gcaggcgcgg cgatcggcgt cgtcgccccc gcgttccagg attggcacaa agcattttgg
     3601 gacaatctcg cgacgacgat ccagctgcac cgcatcaaga aggtcatcgc catcgaccat
     3661 cgcgattgcg gcgccgccaa gatcgcctat ggcgaggcga aagtcgcaac cccgcaggcg
     3721 gaaaccgaga cacacagggc ggcgctcgca gaattccgca agcaagtcgg cgagcgtcac
     3781 ccgcagctcg gggtgcagac cggcctcatg gcgcttgacg gcaagatgga gatgttcagc
     3841 tgaggcgacg ggcgcctcgg cccccgcagg ctgttcagga gcgatgccaa atcaagaagc
     3901 cggcacggac gagataaacg acgctgatgg cgaagatgac cacccgtgtc cattggcgaa
     3961 atccgtggtc ggtcatgcgc tcgatcacga acggcgccag cgaggtgcct ccgattgcta
     4021 acaggatcgc cggccccgtg gcccagagcg gtacatcgcc gatcccggag agcgagccga
     4081 agtagaccgc gcgcacgaca tggctgaacg actgcgtcac cgccttggtg gcgttggtcg
     4141 ttttgcgatc gagcatgctc ttctgaaaga agatgtcgag aaacatccct ccgacgccgg
     4201 cgaggatctg gatcaccgtc gtcgccacgc cggtgaggaa cggcacgccg cgccactcga
     4261 tgttcggacg cgcggcggcg ggcagcgcct cgatcgcgaa cggcatcagt ccgagcgtga
     4321 gaaagaccat cgccttatcc ggcacgaagg caatcatcca catgccggcg aaggagatgg
     4381 cggcgccaac cacataccag ccgaagatcg gccagagcac gtagcggcgc cactgcagcg
     4441 cgcgccagcc attggcgaac agctgaatga tcgagaacag gatcatgccc gtggcgacgt
     4501 cgaaatagtt gagcagaacg ccgagcagga tcatgcctcc ggccatgccg aacacgccgg
     4561 agagaaaaga agtaaaaacg atggtggctc ctaggagagc caggacggaa ggggccattg
     4621 cgggatgact atgccgatct cgccagcgcg ccgtcgatca tgtcgatcgc attgttgagc
     4681 ccatagagtg ccacgaacga gccgaagcgc gggccttttt cctggccgag cagcacctgg
     4741 tagagcatgt tgaaccagtc gagcgcgaca cccggctttc catccttggt cttgatcttg
     4801 ccggtcttgt cgagaaacgg ctcgcgccgg ccgacctcgt agaccacctg ctgaatgtcc
     4861 tcggcgctgg cgtcagcggg aagctgcgcg agcgcttcgc gcaggtcgag caacgcggca
     4921 cgctcgctct cgctcggctc gcggaagcgc ttctgcggca gcacgaaatc gcgaaaatag
     4981 tggatggcgt agcgcacgag cgcgtcgaat ttcgggtgcg tttgcggcgt cacgccgggg
     5041 cgatagcgcc cgatgaagcc ccacagcgtc tccgcgttct cggcgttcga ggatgccacc
     5101 aaggtcagca gcatcgagaa ggagatcggc atatccggct tgggcgggct gcccgcatgg
     5161 atgtgccaga ccggattgga gagctgctgc ttgaggtcct gccgttcata ggcttccagg
     5221 aactgctggt actcgtcgac atggcgcggg atgacgtcga aatagagccg ctttgccgcc
     5281 ctcggctcgc ggtacatgaa cagcgagagc gactccggtg acgcatagcg cagccactcg
     5341 tcgatggtca gcccgttgcc tttggacttc gagatctttt ggcccttctc gtcgaggaaa
     5401 agctcgtaat tgaagccctc gggcggcgtg ccgccgagcg cccggctcac ctcgccggag
     5461 agcttgaccg aatcgatcaa atccttgccc gccatctcgt aatcgacgcc gagcgccagc
     5521 caacgcatcg cccagtcggg cttccactgc agtttggcgc gccctcccgt gatgagggtc
     5581 gtcacgcgct ccttgctatc cggatcttcg taggtgatcg tccccgcccc ggcgtcgtgc
     5641 gccagaatgg gcacctgcaa cacgatgccg gtgcgcggcg agatcggcag gaacggcgaa
     5701 taggtttgcg cgcgctcctc gcgcagcgac ggcagcatga tgttcatgac cgtgtcgaag
     5761 cgctcgagca cacgcagcag cgtggcgtcg aaccggcccg acgtatagca ctcggtcgac
     5821 gacagaaact cgtattcgaa gccgaactga tcgaggaatg cgcgcagccg cgcgttgttg
     5881 gcggccccga acgaagggta ctcgttcgag aacgggtcgg gcacgcgcgt gagcggcttg
     5941 cccaggtgct gcgccatcat ctcccggttc gggacgttgt cgggcacctt gcgcagcccg
     6001 tccatgtcgt ccgagaacgc gatcagacgc gtcttgatct tgtcctcggt gagcacgcgg
     6061 aaggcgtggc gcaccatggt ggtgcgcgcg acctcaccga acgtgccgat atgcggcagg
     6121 ccggaagggc catagccggt ctcgaacacc acctcgtcct tgcggtgctt cttgagccgc
     6181 acgacgatct tgcgcgcctc ctggaacggc caggcgttcg agttttcggc gatctcgcgc
     6241 agcgcaggaa cttgcgcttc gggtgtggac atcagcggct ctccgccgcg gacactaaaa
     6301 accacacccc cttgcgtcaa tcgaaacgcg ccggcgctgc tcgcctgcga agtgtgatgc
     6361 aggtacgagc cgtttgcacc tgccacgtct tcttcgcgct gcgggcgcgg atcatgctca
     6421 atcgagcgcc gcgcgcaccg tcgtcaatgc catgctcagc ttcgagccga gtcccgacaa
     6481 cacggtaatg atggcgaccg ccatgccggc tgcgatcagc gcgtagccga tcgcggtcgt
     6541 accgctttcc tcgcacagga aacgcgcaag gagcactcgc atgtcgataa ctccgccggc
     6601 cactgggtac ggcggcaagt caaccattcc cgcgcttcga tatcgttgcg cggtttgcta
     6661 aaattgcgcg tattgggtcc tctccgggct gcgtgttcgg acacgcacga gcgttgcggc
     6721 acgcgcaggc aagcgcatgg cggcaatgca gttttcgggt cggggtggcc taccggagcc
     6781 gtccgggcat caaaacgggc tgagcgggaa atagcgcagc cacagatcgg tgaaacggcc
     6841 ctgctcccac acgcggaaca gcgcccagtt cagcgccatc cgcatggtat cgttgccttt
     6901 cttgaccgcg attccgaccc cttcgccgaa atagcggcta tcgatgtagg ggccgccgcg
     6961 aaacgcacag caattttcgg agtccgttcc gttgagccag aaggcgagcg tgattgcatc
     7021 cccgaacaga agatcgacct cgccgccccg cagtgcggcc cgcgccgcct cgtcggtcgg
     7081 ataggcgcga atctcggctt cggtaaacag agttttaaga tacgcctcgt gcgcggtacc
     7141 gccgacgacg ccgaccttct ttccctccag ccgctccggc agcggatcct caatcgccga
     7201 atcgcgcctg gccacgaaac gcgccggcgt gcggtaatac gggtcggtga aatcgaccct
     7261 ggtgcgtatg tccagggtcg ccgtgatcga agcgatcgcg gcatcgccct ggttgccgtt
     7321 gagcgccgga atgagcgtct cgaagcggcg catctgaatg gtgcaggcga gcttgagctc
     7381 ctcgcacagc atgcgcgcca gatcgatgtt gaagccctgc gggttgccgt ccgggccggc
     7441 gtaattgaac ggcggatagt cggtctcggt gaggaaacgg atcacgctga tgcgcgccaa
     7501 atcgggtttt tccggtcggc gccgcggatc ccagaagccg ggcacgcgca ccggaggcgg
     7561 ggcgggcgtg gcgcccgcgg tgggagccgg ctctgccact gcctcccgcc cggcgaaaac
     7621 cggcgcgatg agcaacagcg cgacgatcaa gcccccgatg caagcccgca gcaagtattc
     7681 cggcacgcgt gacctctatg actgcttggg tccagtgcta ggctccaaaa gccctgtcgg
     7741 accgctgtgt ataaacgagg cggttaaggc ggatcagtgg cggcccgagt ccctcggcaa
     7801 gtcctcaagg actatcggtg cggtcggctg catcacaagt aacggcgcag atcggcaacc
     7861 gcgacatcgg tcgggcgctt gatattgaag ggcgacacga agcggcccgt cttgtccatg
     7921 agatagacga tggccgtgtg gtccatggta tagccctcgt cgagggggac cttcttgaaa
     7981 taaacgcgat aggccttcgc caccgccgtg atctccgcag gatcgccggt cagaccggac
     8041 agatgcggat cgaagctcga cagatagtcc ttcatgacgg cgggcgtgtc gcgctcgggg
     8101 tcgacggtga tgaacagcgc gcgcgcgcgg tccacgtcgg gtccgagcgc gcgcaaaatc
     8161 tcggacacct cgaacaaggt cgtgggacat acgtcagggc aatgggtgaa accgaagaac
     8221 accaggaagg ggtgcccctt caaatcctga tcggtgacca cttgaccatt ctgatcggtg
     8281 agcttgaagg gtccgccgat ggcggcgatc tgttgcgcga ccggcgagga gagccgcccg
     8341 gccaggatca ggacgacgcc gaagcaaagc gccaggcccg cgacaaaggc ggcggccatc
     8401 agaagaatgc ggctgttgcg tgcggtcatc tcggaatgcc ttaagccgac ggctggatca
     8461 caagcaggcg gcgatcccgg cgacgatcat ctcgtagaac accgcggtgc cgtagtgggc
     8521 ccagagcgcc agcgtcccgg ccagtaggat cgcgacggct gcggcgagga gcatgagtgg
     8581 ccgtgagagc agcgacgtcg ttgcagaagc ggtttcgggc atcgatggtc ccgcatccgg
     8641 ccggccaagt ggacagccgc agccttacca aataggacgg cttgcggccc gcgacaatag
     8701 cgattgccgc gcgttgccgg cctactcggc actcacgccc gccgccgcag acccgccttc
     8761 cgccgcgttc gtcgcggcga tgcctgcagc cgagggcggg cgcatccggg tgagccggtg
     8821 acttgatgcc gcaccccgcg tcctcgagcg aaggcggcga gtgccgcgat gtgccggcgg
     8881 cccgtgcggc catgcgctgc cgcggctaca tcggcgcgcg gtcgtggtta acgcaagcaa
     8941 atgcaaccgt cacaggcgct cctcgggctt cggcagagcc tcgtttgtcg actttgcgac
     9001 tcttccgcgg acagccctct tcggcgccgc ttcctgtgct ctccataaag gtctttcctg
     9061 gcgctcctgg cgggagtaat tttgccacgt tgtttgcgta acgaagatgc cggttcgcca
     9121 atgccaatgc gtagcctgag taaaaccact gctgcaaagc gccgccagta cggcgccttg
     9181 ccataccggt tgcgggacgg ctcccgccgg ccgcagatca tgctcatcac atcgcgggaa
     9241 aaccagcgct gggtcatccc gaagggctgg ccaagaaagg caaatcgccg cactcttcgg
     9301 ctgcgcgcga ggccttcgaa gaggccggcg tgctgggcgc cgttgccaag cgccccgtcg
     9361 gctccttctc ctatcaaaag cggctcaaga gcggcgccgt cgtcctctgc gacgtgcatg
     9421 tgtttccgct ggaagtgcgg cgccaaagca agcaatggcc ggaaaagcag gagcgagtca
     9481 tcaagtggct ctccggctcg caagcggcgg aaaaggtcga cgagccgatg ttgagtgaga
     9541 ttatccggcg cctggcgcgc aagtataacg gccgccactg actgagctgc tcccgcgctt
     9601 tcatcgcgcg gatcgaacca actgccgtca tgcggcggcg ttgcgcgggc atgacggatg
     9661 agaggtcaac tggccggcgc ggtagctacc ttcctcgagt tagttaggcc gtgcactcat
     9721 aaatctggac gctgggatca gacgcctttg atgtccgctt gtcccctaac cgcggcagaa
     9781 ggcgggcatc gcaagatttc cgagtcgggg ccagcaagga ctcctgcagc acaacagaag
     9841 gcgctcaggg aattgctctc gtgggtgcac ccatagccgc ccggctcgcg aaggcgattg
     9901 tctaagcttc tatttcgttt tttcgaacac aaggaggctc ctctgcatcc ccttgtctgc
     9961 ccagttgggc attatccgcc acgtcgaggt gacgtgaagc cgatcgccgt caagtttgaa
    10021 gaagcgtgtt tgctcggtac caacccattc agggttccaa gcaacatcga cctgcgtaat
    10081 ccatttgtcc ccttcgaggc gatacatgcc ggtataggcg gccatactgt ttagcagatc
    10141 ggcgcgatct tggaccgttt gtggtggctt gcgtccttct ccagtcagga caaacattac
    10201 ccgaccctcg ggcgtgaaaa ttgcgtatcc cgttggggaa cgtcccatga caggttcttt
    10261 ctgcccgctg gcttgaattt cgatttcttg agaaaccagt ttccagatgc caatcacttt
    10321 ttcacggtca tcagcgaagc ttggctgcgc cgcaacaagc cacccaacga cggcaacaag
    10381 gcatttgaac gcagacataa gaatttcctt tcattgcact gccttttgat ccagtgggct
    10441 taatattggc ggaaaaattg agctgctcca actgcggaca tcgatccgcg cgactttgcg
    10501 cgttgatgac agcaacggcc gggaatgcaa ccgccatgcg gggcatctag cggcaacggt
    10561 tagcgatggc gcgtggctcg ctcctcgccc aaaccaactg atgcgcgcac attgcgcgag
    10621 gaatgcagct gaagattcat tcatcaagta aacaaccatt catatcgata aacatcaatt
    10681 cacgtacatg ggagaattgt aattaggaaa aatcagaaga cgttctaaca tgagtgacga
    10741 agcaaatagc agctatttgc ttgcgatcac ccaaggagga catcatgaat aagctcgtgc
    10801 tggcact
//
LOCUS       DATCWM010000515         3434 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_505806, whole genome shotgun sequence.
ACCESSION   DATCWM010000515 DATCWM010000000
VERSION     DATCWM010000515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3434)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3434)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3434
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_505806"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1739)
                     /locus_tag="VIQ50_10130"
     CDS             complement(<1..1739)
                     /locus_tag="VIQ50_10130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360783.1"
                     /translation="MRPAARATAWTLSLFVSLAANTSQAADLVWEVESPFRFFKPSRS
                     FDLHEAAFKTVRGDPFAAPPADIIWRTERALNDPDCKDGSTPDRCAATAGKRYQQSRL
                     GWAAQTLAETCYESNGRPPRYSPVCERRYSWGAATEDYVLPQAHTVAIHIASEQLATA
                     TGDCTWSWHPRKPGGKTQSKRIACTDKLVIPRVPYAFDRANSGVFVTVSLPDGRELTE
                     PEVVVEDLFIVALGDSFASGESNPDRPVQFSAGREMVYEPALLRAGLASRMPNKRATP
                     SFDVASTEDRHNPKVLPRRYMEDEAAERFYGLGSPQFLAAFEKASARWLSRDCHRSQY
                     GYPFRVALELALEDRHRSITFASFTCSGAEVTDGLFLDMEAREAASEIPGGKVRAQFD
                     QLSDFICRGARSQRAGYALPTYAHGSVRISAQTIVKAWCPLQSRKRAIDIVLMSIGGN
                     DVGFSALAAYSLTENMADLAPIAGLAGRTSRFGPQVSRAYLEMLDERMKAVKEALYDG
                     FGVAPSRVVQSSYEPIQYDETGALCGAQPTLGMDVHPGLRVDRHRLQETADFLRDFLA
                     RLECISGGKSRAG"
     gene            1943..2941
                     /gene="meaB"
                     /locus_tag="VIQ50_10135"
     CDS             1943..2941
                     /gene="meaB"
                     /locus_tag="VIQ50_10135"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012043160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HEY9360784.1"
                     /translation="MALRHRPAIPDLADLARGIRARERAVIARAITLIESRRSDHQHA
                     ARRLVQELLPLTGKAIRVGITGAPGVGKSTTIDALGTFLTSKGHKVAVLAVDPSSTRS
                     GGSILADKTRMPRLSSDANAFVRPSPSSGTLGGVATKTRESMLICEAAGYDVVLVETI
                     GTGQSETMVADMTDFFLVLMLPGAGDELQGLKKGVIELAEMIAINKADGDNIKRAQLA
                     AAEYRAALHILNPRSPSWSPPVVTYSALTGAGIAELWGGILEHRQRMGKAGELDARRR
                     EQQVKWMWAMLEERVFARLKSNPALRAKLPRIEAAVAAGRMSPALAVEEIASLLDV"
     gene            3049..>3434
                     /locus_tag="VIQ50_10140"
     CDS             3049..>3434
                     /locus_tag="VIQ50_10140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011442422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyroglutamyl-peptidase I"
                     /protein_id="HEY9360785.1"
                     /translation="MTATILITGFGPFPGAPFNPSEPLALELARRRHRAFAGVRRVGH
                     VFRVTYEAVDAELPALIAREKPAALVMFGLAARTKHVRIETRARNVLTHVLPDADGQI
                     RTAATIAPGAPVALSLRAPTHRLLLAA"
BASE COUNT          618 a         1129 c         1082 g          605 t
ORIGIN      
        1 caacctgcgc ggctcttgcc gccgctgatg cattcgagcc gggcgagaaa atcgcgcaga
       61 aaatcggctg tctcttgcag acggtgtcga tcgactctca aaccgggatg cacatccatg
      121 cccagcgtgg gctgcgcgcc gcacagcgcg ccggtctcgt cgtattggat cggctcatag
      181 gaggactgca cgacgcggga aggcgcgacg ccgaagccgt catacagcgc ctctttgacc
      241 gctttcatgc gttcgtcgag catctcgaga taggcgcgcg agacttgcgg tccgaagcgg
      301 ctcgtgcgtc cggctaggcc ggcgatgggc gcaaggtcgg ccatgttctc cgtcaaggag
      361 tacgccgcaa gcgcgctgaa gcccacgtca ttgcccccga tcgacatcag gacgatatcg
      421 atcgcccgct tgcgcgattg cagcgggcac caggccttca cgatcgtttg cgccgaaatg
      481 cgaacgctgc cgtgcgcgta ggtcggcagc gcatagcccg cacgctgcga acgcgcgccg
      541 cggcagatga agtcgctgag ctgatcgaac tgcgcgcgga ctttgccacc ggggatttcg
      601 ctcgcagcct cgcgcgcctc catgtcgaga aataagccat cggtcacctc cgcgcccgag
      661 caggtgaagc ttgcgaacgt gatcgagcgg tggcggtcct caagagcaag ctcaagcgcg
      721 acgcggaagg gataaccata ctgcgagcga tggcagtcgc ggctgagcca ccgcgccgac
      781 gctttctcga atgcggcgag gaattgcggc gatccgagcc cgtaaaaacg ctccgccgcc
      841 tcgtcctcca tgtaccggcg cggcagtacc ttcggattgt ggcgatcctc cgtggatgcg
      901 acatcgaagc tcggtgtcgc gcgcttgttc ggcatcctcg aggcaagacc cgcgcgtaac
      961 aaggccggct cgtacaccat ttcgcgcccg gcgctgaatt gcaccggccg atcggggttg
     1021 ctttctccgg aggcgaaaga atcgccgagg gcaacaatga agagatcctc aaccaccacc
     1081 tccggctccg tgagttcgcg gccgtcgggt aagctgaccg tcacaaacac tccggaattc
     1141 gctcgatcaa acgcataagg cacgcggggg atgacgagct tatctgtgca ggcgatgcgc
     1201 ttgctctggg tttttccccc gggcttgcgc ggatgccagc tccaagtgca gtcgccggtt
     1261 gcagttgcaa gctgctcgga cgcgatgtgg atggcgaccg tgtgcgcttg cggcaaaacg
     1321 taatcttcgg tcgccgcacc ccatgagtat cgacgctcac agaccggcga atatcgcgga
     1381 ggacgaccgt tgctctcgta gcaggtttcg gccaacgtct gcgccgccca accgaggcgg
     1441 ctttgctgat agcgcttgcc cgccgtggcg gcgcagcggt caggcgtcga gccatccttg
     1501 caatcaggat cattgagcgc ccgttcggtg cgccagatga tatcagctgg cggcgcagcg
     1561 aatggatcgc cacgtaccgt cttgaatgcc gcctcgtgca aatcgaaaga tcggctcggc
     1621 ttgaagaacc gaaatgggct ttcgacttcc cagaccagat cggcggcctg gctggtgttg
     1681 gcggcgaggc tgacgaataa agataaagtc caagcggtcg cgcgcgctgc tggacgcatg
     1741 catgcctccc gaccccatcc gcaggctata atagagccgg gccggcctgg ctggcgaggg
     1801 aactcggcac ccggtagcca gttacggatc atcctgtttg ccgtcgagct atcccactga
     1861 aattcatatg gaacgcgcat tggatcgcag ccggccagcg ccccgcgagc ggctcctgcg
     1921 gacgcgtctc tagggcaaat tcatggcttt gcgtcatcgc cccgccattc ccgatcttgc
     1981 cgatctggcg cgcggcattc gtgcgcgcga gcgcgcagtc attgcccgcg ccatcacgct
     2041 gatcgagagc cgccgcagcg atcatcagca cgcggcccgc cgtctggtgc aggagcttct
     2101 gccgttgacc ggcaaagcga tccgagttgg catcaccggc gcaccgggcg tgggcaagtc
     2161 gaccactatc gacgcgctcg gcacgttcct caccagcaag gggcacaagg tcgccgtcct
     2221 tgccgtcgat ccttcttcta cccgcagcgg cggctcgatt ctggccgaca agacccgaat
     2281 gccgcgcctc agcagcgatg ccaatgcctt cgtacgcccc tcaccgtctt ccggcacgct
     2341 cggcggcgtc gccacaaaaa cacgtgagtc gatgctcatc tgcgaggcgg cgggctacga
     2401 tgtggtgctg gtcgaaacca tcggcacggg tcagtcggag accatggtcg ccgacatgac
     2461 cgattttttc ctggtgctga tgctgcccgg cgccggcgac gaactgcaag gactcaagaa
     2521 aggcgtcatc gagctcgccg aaatgatcgc gatcaacaag gccgacggcg ataacatcaa
     2581 gcgcgcccag ctggccgcgg ccgaataccg cgccgcgctg cacattctca atccccgctc
     2641 gccgagttgg tcgccgccgg tcgtgaccta ttcagctctg actggagccg gcattgccga
     2701 attatggggc ggcattctcg agcatcggca gcgcatggga aaagccgggg agctcgacgc
     2761 gcgccggcga gagcagcagg tgaaatggat gtgggccatg ctcgaagagc gcgtgttcgc
     2821 gcgcctgaaa tccaatccgg cgctcagagc gaagctgcct cgcatcgagg ccgccgtcgc
     2881 tgcgggacgg atgtccccag ccctcgccgt cgaggagatc gcgtcgctgt tggacgtctg
     2941 aacctagacg tctcggatga ggccattccc agcaaatccc ggcccgatat attctgggtc
     3001 ggcgctcacg tattgcgcgg aacttctccc ctgactagct caggtcgcat gacggcgacg
     3061 atccttatca ccggcttcgg cccgtttccc ggagcgccat tcaatcctag cgagccgttg
     3121 gccctcgaat tggcgcggcg ccgccatcgc gcgttcgccg gcgttcgtcg cgtcgggcac
     3181 gtttttcggg taacgtacga ggcggtcgat gcggaactgc cggcgctgat tgcgcgcgaa
     3241 aaacccgccg ccttggtcat gttcgggctg gcagcccgca ccaagcacgt gcgcatcgag
     3301 acccgcgcgc gcaatgtgct cacgcacgtc ctgcccgatg ccgacgggca aatccggacc
     3361 gccgccacca tcgccccggg cgcgccggta gcgctgtcgc tgcgagcgcc cacgcaccgg
     3421 ctgctgctgg cggc
//
LOCUS       DATCWM010000516         4138 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_316836, whole genome shotgun sequence.
ACCESSION   DATCWM010000516 DATCWM010000000
VERSION     DATCWM010000516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4138
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_316836"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..300
                     /locus_tag="VIQ50_10145"
     CDS             <1..300
                     /locus_tag="VIQ50_10145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012329592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY9360786.1"
                     /translation="GGALLEHCIYDARGQLLNGNMADYLVPMAAEMPDIEVGHVVTPT
                     ADSELGAKGAGEAGTAGAPGAVMNAINDALRPLGAKPLTHMPFTPGKILHALGKV"
     gene            308..1483
                     /locus_tag="VIQ50_10150"
     CDS             308..1483
                     /locus_tag="VIQ50_10150"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HEY9360787.1"
                     /translation="MFTATKGKALITTTTGALPRPSWYTANLRGMPLSHGLSQAAYRE
                     QHFDCLACNVAAQHRAGIDIFVDGDARLDDDVAGRSWVSYATERIAGIGKPRVEVPPA
                     HFMADKGPGDLMWEVIETRMTPPVEGRIGATALELDRAYKAIAAMTDRPVKIGSISAQ
                     ILALMLTDEHYRDRLKLLFDLSAALNREYHALADAGAPMVQIEEPAIHQVIADPNAAI
                     APAQWVEAFNAEVAGLRSKCEVWCHTCWGSPAAQRVASRDQSYRDALPYFDQLDVDVI
                     TFEGAFNRGMDFEAIGRTISKDKKVALGVISHRTLQVERPEEIAELIRLALRYVEPER
                     LILTSDCGFGRQSMSRMHAYYKMVALVRGANIVRRELGLPEAYIPGADPRLSMVPME"
     gene            1605..2558
                     /locus_tag="VIQ50_10155"
     CDS             1605..2558
                     /locus_tag="VIQ50_10155"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEY9360788.1"
                     /translation="MDIKVGRQAIAEATEKLKNWGRWGKDDQIGTLNHVTPEDIVKAA
                     RLIRTGKVFALGIPLDSNGPQTGLFGGRFNPIHQMLATGTDAVAGRQDWNKIRYADDT
                     LNLCVQGATHWDALGHIFYEERAYNGYDAKLIDAKGLNVLGIEHSKSKMVGRGVLLDI
                     ARFRGVDWLNDGEGIANDELDRCAKKQKVEIGRGDFVIIRTGQLERCLKEKKWGGYAG
                     GDAPGVKFENCYWCQDKQIAAICSDTWGVEVRPNETTEANQPWHWVVIPAMGLCMGEI
                     FYLKELAEHCAADGVYEFFFCGPPLIITGGTGSPINPQAIK"
     gene            2684..3991
                     /gene="hisD"
                     /locus_tag="VIQ50_10160"
     CDS             2684..3991
                     /gene="hisD"
                     /locus_tag="VIQ50_10160"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018517387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEY9360789.1"
                     /translation="MARYLKRGMDASAIKAADAKVRETVESILAEVEARRDAAVRELS
                     QRFDGWSPPSFKLDAGEIERAISRVGKRDLDDIKFAQAQVRNFAQKQKETMRDLEVET
                     LPGVVLGHRHIPVNSIGCYVPGGRYPMVASAHMSIVTARVAGVNRIIACAPPFKGGPH
                     PAIVAAMHFGGADEIYVLGGVQAVAAMALGTETIGAVDMIVGPGNAYVAEAKRQLFGR
                     VGIDLLAGPTETLIIADDSVDGEICATDLLGQAEHGPTSPAILITNSEKLARDTMREV
                     ERLLALLPTADAAGKAWADFGEVIVCESEEEMVREADRVASEHVQVMTRNPDYFLDTM
                     KNYGSLFLGPRTNVAYGDKVIGTNHTLPTKKAARYTGGLWVGKFLKTCTYQKVLTDEA
                     SALVGEYCSRLCILEGFYAHAEQANVRVRRYGGRNVAFAQAAE"
BASE COUNT          796 a         1340 c         1357 g          645 t
ORIGIN      
        1 ggcggggcgc tgctcgagca ttgcatctac gacgcgcgcg gacagctgct caacggcaac
       61 atggcggatt atctcgtgcc gatggcggct gaaatgcccg atatcgaagt cggccacgtg
      121 gtcacgccga ccgccgattc cgagctgggc gccaaaggtg ccggggaagc gggcacggct
      181 ggcgcgccgg gcgcggtcat gaatgccatc aacgacgcgc tgcggccact cggcgccaag
      241 ccgctcaccc acatgccgtt cacgcccggc aagattttgc acgcgctcgg caaggtgtag
      301 cggcggcatg ttcacggcga ccaaaggcaa ggcactcatc accaccacga ccggcgcgct
      361 accgcggccg agctggtaca cggccaacct gcgcggcatg ccgctctccc atggtctgtc
      421 gcaagccgcc taccgcgagc agcatttcga ttgtctcgcc tgcaacgtcg ccgcccagca
      481 tcgcgccggc atcgacattt tcgtcgacgg cgatgcgcga ctcgacgacg acgtcgccgg
      541 ccgcagttgg gtgagctacg ccaccgagcg catcgccggg atcggaaagc cgcgcgtcga
      601 ggtgccgccg gcacacttca tggccgacaa gggccctggc gacttgatgt gggaggtgat
      661 cgagacgcgc atgacgccgc cggtcgaagg ccggatcggt gcgaccgcgc tcgagctcga
      721 tcgcgcttac aaggcgatcg ccgccatgac cgaccggccg gtgaagatcg gttcgatctc
      781 ggcccagatc ctcgcgctga tgctgacgga tgagcactac cgcgaccggc tgaagctgtt
      841 gttcgacctc tccgccgcgc tcaaccgcga gtaccacgcg ctggccgacg ccggcgcgcc
      901 gatggtgcag atcgaggagc ctgcgatcca tcaagtcatc gccgacccga acgccgcgat
      961 cgcgccggcg caatgggtcg aggcgttcaa cgccgaggtc gcaggcttgc gcagcaaatg
     1021 cgaggtgtgg tgccacacct gctggggcag ccccgccgcc cagcgcgtgg cgagccgtga
     1081 ccagtcctac agggatgcgc tgccgtattt cgaccagctc gacgtggacg tcatcacctt
     1141 cgagggcgca ttcaaccgcg gcatggattt cgaggccatc ggcaggacga tctccaagga
     1201 caagaaggtt gcgctcggcg ttatcagtca ccgtacgctg caggtcgagc gcccggagga
     1261 gatcgccgaa ctgatccgcc tcgcgctgcg ctacgtcgag ccggagcggc tgatcttgac
     1321 gagcgactgc ggcttcggcc ggcagtcgat gagccgcatg cacgcctact acaagatggt
     1381 cgcgctggtg cgcggcgcca acatcgtgcg gcgggaactc gggttgccgg aagcctacat
     1441 tcccggagcc gatccgcggc tgtcgatggt gccaatggaa tagcagcgct tgcgtcgcct
     1501 gacggtgccg gccgctcgcg cttcaacgat agcgcccgat ttgcaaatgg acgaagttcg
     1561 ccggagaggt cacaatccct gcgatgagga ccagggagta gtcgatggac atcaaagtgg
     1621 gccggcaggc gatcgcagag gccacggaga agctgaagaa ctggggccgc tggggcaagg
     1681 acgatcagat cggcacgctc aaccacgtca cgcccgagga tatcgtcaag gccgcccgtc
     1741 tgatccgcac cggcaaggtg tttgcgctcg gcattccgct cgacagcaac ggcccgcaga
     1801 ccgggctgtt cggcgggcgc ttcaatccga tccaccagat gctggcaacc ggcaccgacg
     1861 ccgtggccgg ccggcaggac tggaacaaga tccgctacgc cgacgacacg ctgaacctgt
     1921 gcgtgcaggg cgcgacccac tgggatgcgc tcggacacat cttctacgag gagcgcgctt
     1981 acaacggcta cgacgccaag ctcatcgatg ccaaagggct gaacgtgctg ggcatcgagc
     2041 attccaagag caagatggtg ggacgtggcg ttctgctcga catcgcacgc ttccgcggcg
     2101 tggactggct caacgacggc gaagggattg ccaatgacga actcgaccgt tgcgccaaga
     2161 agcagaaggt cgagatcggg cgcggcgact tcgtcatcat tcgcaccgga cagctcgagc
     2221 gctgtctcaa ggaaaagaaa tggggcggct atgccggcgg cgacgcgccc ggcgtcaaat
     2281 tcgagaactg ctactggtgt caggacaaac agatcgcggc gatctgctcg gatacctggg
     2341 gggtcgaagt gcggcccaac gagaccacgg aagcgaacca gccctggcat tgggtggtca
     2401 ttcccgccat ggggctgtgc atgggcgaaa tcttctatct caaggaactg gcggaacatt
     2461 gcgccgccga cggcgtctat gagttcttct tctgcgggcc gccgctgatc atcaccggtg
     2521 gcaccggctc gccgatcaat ccgcaggcaa tcaaatgacg ccataggttg cggccgatac
     2581 cgcaccgagt acggatagcc cacgtccgcg gatataatga gggtcgacga cgcgtgcggc
     2641 cgggaccagg ctgagcgcga caaaacctga aacggaggct cccatggccc gctacctcaa
     2701 gcgtggaatg gacgcgagcg cgatcaaagc cgccgacgcc aaggtacgcg agacagtgga
     2761 aagtatcctc gcggaggtcg aggcgcggcg cgacgcggcg gtgcgcgagc tatcgcaacg
     2821 cttcgacggc tggtcgccac cctcgttcaa gctcgatgct ggcgagatcg agcgcgcgat
     2881 atcgcgggtc ggcaagcgag acctcgacga catcaaattc gcgcaggcgc aggtgcgcaa
     2941 cttcgcgcag aagcagaaag agaccatgcg cgatctcgag gtcgagacgc tgcctggcgt
     3001 cgtgctggga caccggcaca tcccggtgaa ctcgatcggt tgctacgtgc cgggcggacg
     3061 ctatcccatg gtcgcctcgg cgcacatgtc gatcgtgacg gcgcgcgtcg cgggggtgaa
     3121 ccgcatcatc gcctgcgcgc cgccgttcaa aggcgggccg cacccggcga tcgtcgccgc
     3181 gatgcatttt ggtggcgccg acgagattta cgtgctcggc ggcgtgcaag cggtcgccgc
     3241 catggcgctc ggcaccgaga caatcggcgc ggtggacatg atcgtcgggc ccggcaacgc
     3301 ctatgtggcg gaagccaagc gccaactctt cggccgcgtc ggcatcgacc tgctcgccgg
     3361 tccgaccgaa accctgatca tcgccgacga cagcgtggac ggcgagattt gcgccaccga
     3421 tctgctcggc caggccgagc acggcccgac ctcacccgcc atcctcatca ccaattcgga
     3481 gaagcttgcg cgcgacacca tgcgcgaggt cgagcggctg ctcgccttgc ttccgacggc
     3541 ggacgctgcc ggcaaggcgt gggcggattt cggcgaggtc atcgtctgcg agagcgagga
     3601 ggagatggtg cgcgaggccg accgcgtcgc ctccgagcac gtgcaggtga tgacgcgaaa
     3661 tccggattac ttcctcgaca ccatgaagaa ctacggctca ctgtttctcg gcccccgcac
     3721 caacgttgcc tatggcgaca aggtgatcgg gaccaaccac acgctgccga ccaagaaggc
     3781 cgcacgctat accggcggct tgtgggtggg gaaattcctc aaaacctgca cctaccaaaa
     3841 agtgctcacc gacgaagcat ccgcactggt cggcgaatat tgctcacggc tgtgcatcct
     3901 cgaggggttc tacgcccatg ccgagcaggc caacgtgcgc gtgcgccgct acggcgggcg
     3961 caacgtggcc ttcgcccagg cggcggaatg agcggccacg cgcttgccgt cgccatgcca
     4021 agtcaagaca cgaggtcaag gccggtcatc tccgcgatcg ccgcggagct attcgtcgcc
     4081 gacatcaagg catcgtgcga tttcttcacc cagaagctcg gcttctcaat tgtgttca
//
LOCUS       DATCWM010000517         3903 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_430438, whole genome shotgun sequence.
ACCESSION   DATCWM010000517 DATCWM010000000
VERSION     DATCWM010000517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3903
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_430438"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..395
                     /locus_tag="VIQ50_10165"
     CDS             <1..395
                     /locus_tag="VIQ50_10165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016842716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="peroxidase"
                     /protein_id="HEY9360790.1"
                     /translation="SAHNALTTITENGKEFQIVRDNMPFGRAGSGEFGTYFIGYCRTP
                     RVTEQMIENMFVGRPPGNYDRLLDFSRAVTGTLFFVPSATFLESVNDDPAAAIRDPQS
                     TLEPAPPDPGAPDGSLAVGSLKGENRHE"
     gene            388..1206
                     /locus_tag="VIQ50_10170"
     CDS             388..1206
                     /locus_tag="VIQ50_10170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016842715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0140737 - encapsulin nanocompartment
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 1 encapsulin nanocompartment shell
                     protein"
                     /protein_id="HEY9360791.1"
                     /translation="MNNLHRELAPISDAAWADIEEETTRTLKRYLAGRRVVDVQGPGD
                     VSLSAVGTGHLKTIAEPGKGILARQREVKALVELRVPFELNRQQIDDVERGANDSDWQ
                     PAKDAAQKIAYAEDRAIFEGYPAAGIGGIRQGTSNPIMTLPADVRHYPDAIAQALNQL
                     RLVGVDGPYSVLLSAEAYTALAETSDNGYPVLEHVKKLVKDEIIWTPAIAGAFVLTTR
                     GGDFDLHIGQDLSIGYLSHTDSVVRLYLQETLTFLLLTTEAAVALAPAAKGRRP"
     gene            1343..2608
                     /locus_tag="VIQ50_10175"
     CDS             1343..2608
                     /locus_tag="VIQ50_10175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018044829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate/amino acid:cation symporter"
                     /protein_id="HEY9360792.1"
                     /translation="MRSKLTTIILIGMVLGILVGYACHILWPDPKTAKTIADYISLFT
                     DIFLRLIKMIIAPLVFSTLVVGVAHMGDTKSVGRIGGKAMVWFIGASLVSLLVGMILV
                     NILRPGDNLNLPLPDAEASTNLKVASLSMKEFVAHLVPRSIVEAMATNEILQIVVFSL
                     FFGVACAALGERTRNLVEGIEQLSFVILSITGYVMALAPIAVFASMAAIVTTQGLGIL
                     VTYGKFVIEFYFGLAVLWCLLIAVGFVIFGRHSFRLLNLIREPFLLAFSTASSEAAYP
                     KTMEQLEKFPISKKIISFVLPMGYSFNLDGSMMYCTFATLFIAQAYNIELSIGEQITM
                     LLLLMLTSKGMAGVPRASLVVIAATLASFNIPEAGLLLIIGIDQFLDMGRSATNVIGN
                     TLATAAIAKWEGERVDLGELEAALAPKAA"
     gene            2608..3570
                     /locus_tag="VIQ50_10180"
     CDS             2608..3570
                     /locus_tag="VIQ50_10180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEY9360793.1"
                     /translation="MRVMRAKHAWREAAGAGSVLGRARTVIAAASILVLVAPANAQES
                     ANVGALSGTLKKIKGTGTITLGYRESSLPFSYLNRRQQPIGYSIDLCREIVEDASAEL
                     DGIEIKIAFAPVTPANRLQKVASGEIDLECGSTTGNVQRRKEVAFSPIFFVAGTKLMV
                     PKSSSISSYRDLAGKTAVVTAGTTNEAALRTLSDKQKLGITIITAPDHAQSLEMLASG
                     KAAAFATDDVLLYGFIATAKDSRDMKVVGEYLSYDPYGLVYRRDDPAFAAVVERAFAR
                     MAAERRLTELYNKWFLRRLPTGETLNLPMSPQLEEVFRMLGQPE"
     gene            3693..>3903
                     /locus_tag="VIQ50_10185"
     CDS             3693..>3903
                     /locus_tag="VIQ50_10185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9360794.1"
                     /translation="MRAQAYPTRPITIVVAYPPGAATDIVARILSENLPGSLGQPVIV
                     ENVAGANGSIGAGRVARAAPDGYTLI"
BASE COUNT          711 a         1268 c         1159 g          765 t
ORIGIN      
        1 cctcggcgca caacgccctc accacgatca ccgagaatgg caaagagttt cagatcgtac
       61 gcgacaacat gcccttcggc cgagctggca gcggcgaatt cggcacctac ttcatcggct
      121 attgccgcac tccgcgagtg accgagcaga tgatcgagaa catgttcgtc ggccgcccgc
      181 ccggcaacta tgatcgactg ctcgacttca gccgggcggt gaccggaacc ctgttcttcg
      241 tgccatccgc gacattcctg gaatccgtga acgacgaccc tgcagcggcg atacgcgatc
      301 cgcaatcaac gctcgagcct gcacctccag atcctggggc gcccgacggt tcgctcgcag
      361 taggctccct caaaggagaa aaccggcatg aataatcttc accgcgagct cgctccaatt
      421 tccgatgcag cgtgggcaga tatcgaagag gagacgacgc gcacgcttaa gcgctatctc
      481 gccgggcggc gcgtggtcga cgtccagggg ccgggtgatg tgagcctttc cgccgtcggc
      541 accggccacc tcaagacgat tgcggagccc ggcaagggca tccttgcgcg gcagcgcgag
      601 gtcaaggcgc tggtcgagtt gcgggttccc ttcgagctca atcgtcagca gatcgatgac
      661 gtggaacggg gtgcgaacga ctccgactgg caaccggcga aggacgccgc gcaaaagatt
      721 gcctatgccg aggaccgcgc catcttcgag ggctatcccg cggcgggcat cggcggcatc
      781 cggcagggca ccagcaaccc gatcatgacg ctgcccgccg acgtccgtca ctatcccgac
      841 gccatcgcac aggccttgaa ccagttgcgc ctcgtcggcg tcgatgggcc ctattcggtg
      901 ctgctcagcg ccgaggctta tacggcgctc gctgagacca gcgacaacgg gtatcccgtg
      961 ctggagcatg tcaaaaagct cgtcaaggac gagatcatct ggacgccagc catcgccggt
     1021 gccttcgtgc tcaccacgcg cggcggtgat ttcgatctgc acatcgggca ggacctctcg
     1081 atcggttatt tgagccacac cgacagcgtc gtgcgccttt atctccagga gacgttgacc
     1141 ttcctgctgc tcaccaccga ggccgctgtc gcgctggcgc ctgccgcaaa agggcgacga
     1201 ccttaagtcg tcggcgatag cgtgttgggc agagtttttt tgcatatcta tgaggcctgc
     1261 ctccgctgca gtgcataggt ctgcttttgc gcggcgtctt ttctgctagg ctgctgctct
     1321 ggcacaacgc agggggcaaa ccatgcgctc gaagctcacc acgattattc ttatcggcat
     1381 ggtgctgggc attctcgtcg gttacgcctg tcacatcctg tggcccgatc cgaaaacggc
     1441 aaagaccatc gccgactaca tctcgctgtt caccgacatc ttcctgcgcc tcattaaaat
     1501 gatcatcgcg ccgctcgtgt tctcgacgct cgtggtcggc gtggcgcata tgggcgacac
     1561 caagtcggtc ggccgcattg gcggcaaggc gatggtctgg ttcatcggcg cgtcgctggt
     1621 atcgctcttg gtaggcatga tcctggtcaa catcctcagg ccgggcgaca acctcaatct
     1681 gccgctcccc gacgcggagg cttcgaccaa cctcaaggtt gcgtcattgt cgatgaagga
     1741 attcgtcgcg cacctcgtgc cgcgttcgat cgtcgaggcg atggcgacca acgaaatcct
     1801 gcaaatcgtc gtgttctcgc tgttcttcgg tgtcgcctgc gcggcgctcg gcgagcgcac
     1861 ccgcaacctg gtcgaaggca tcgagcagct ttcctttgtc atcctgtcga tcaccggtta
     1921 tgtcatggcg ctcgcgccga tcgcagtgtt cgcgtcgatg gccgcgatcg tgacaaccca
     1981 aggcctcggc atcctcgtga cctacggcaa gttcgtcatc gagttttact tcgggcttgc
     2041 cgtgctgtgg tgcctcctga tcgccgtcgg cttcgtgatc ttcggccgcc atagcttccg
     2101 gctcctcaat ctgatccgcg agccgtttct gctcgcgttc tccaccgcga gcagcgaggc
     2161 agcctatccc aagaccatgg agcagctcga aaagtttccg atcagcaaga agatcatcag
     2221 cttcgttctg ccgatgggct actcgttcaa tctcgacggc tccatgatgt actgcacctt
     2281 tgccacgctg ttcatcgcgc aggcctacaa tatcgagctg tcgatcggag agcagattac
     2341 gatgctcttg cttctgatgc tcaccagcaa gggcatggcc ggcgtgccgc gcgcttcgct
     2401 cgtggtcatc gccgcgacgc ttgccagctt taacattccc gaagcgggat tgctgctgat
     2461 catcgggatc gatcaattcc tcgatatggg ccgctcggca acgaacgtga ttggcaacac
     2521 gctggccacg gccgcgatcg cgaagtggga gggcgaacgg gtcgatctcg gggaactgga
     2581 ggccgcgctc gcgcccaagg ccgcctgatg cgcgtcatgc gagcgaagca cgcctggaga
     2641 gaagccgccg gcgcgggcag cgtcctgggc cgggcgagga ctgttatcgc cgcggcgtcc
     2701 atccttgtcc tcgtcgcccc cgccaacgcc caggagtcgg cgaatgtcgg ggcgctctcc
     2761 ggaacgctca agaagatcaa gggcaccggc acgatcacgc tcggctatcg cgaaagctcg
     2821 ttgccgttct cctatctcaa tcgcaggcaa caaccgatcg ggtactcgat cgacctttgc
     2881 cgcgagattg tggaagacgc gtccgccgaa ctcgacggca tagagatcaa gatcgcattt
     2941 gcgccggtga ccccagccaa tcgcctgcaa aaggtggcgt ccggcgagat cgatctcgaa
     3001 tgcggctcga ccacgggcaa tgtccaacgc cggaaggaag tcgcgttctc gccgatcttt
     3061 tttgtcgccg gcaccaagct gatggtgccg aagtcgtctt ccatcagttc ctaccgtgac
     3121 ctcgccggca agaccgcggt cgtgaccgcc ggcacgacca acgaggccgc cctgcgcacg
     3181 ctctcggaca agcagaagct cggcatcaca atcatcaccg cccccgatca cgcccagtcg
     3241 ctcgagatgc tcgcatccgg caaggcggcc gcgttcgcaa ccgacgacgt tcttttgtac
     3301 ggcttcattg cgaccgcgaa ggactcgcgc gacatgaagg tcgtcggcga atatctgtcc
     3361 tatgatccct atggtctagt ttaccggcgc gacgatccgg cttttgccgc cgtggtcgag
     3421 cgcgctttcg cgcgaatggc ggccgagcgg cggctcaccg agctctacaa caagtggttc
     3481 ctgcgccggc tgcccaccgg cgagacgctc aatctgccga tgagcccgca actggaagag
     3541 gtgttccgca tgctgggcca accggaatag aaatcgcgcc gctatattcg atgaggcgct
     3601 gcattccaga gattcgatcg atcgcaacct cgcgccggcg tgcgttccgt ctcgcggctg
     3661 gcgctgcggc cctctccatc atgccgcgaa cggtgcgggc gcaagcgtat cccacgcggc
     3721 caatcacgat tgtggtcgct tatcctcccg gcgcggcgac cgatatcgtc gcaagaatct
     3781 tgagcgaaaa tctgccgggg tcgctcggtc aacccgtgat tgtcgagaac gtggccggtg
     3841 cgaacggaag cattggcgcc ggccgcgtgg cccgtgctgc tcccgatggc tacacgctca
     3901 tcg
//
LOCUS       DATCWM010000518         3449 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_14378, whole genome shotgun sequence.
ACCESSION   DATCWM010000518 DATCWM010000000
VERSION     DATCWM010000518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3449)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3449)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3449
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14378"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..893)
                     /locus_tag="VIQ50_10190"
     CDS             complement(<1..893)
                     /locus_tag="VIQ50_10190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEY9360795.1"
                     /translation="MIKASNGHGGYWTKGFAVADDFEEPDGTHVLTFHQAGDAGKALA
                     RGKADTADSKPMTVADALARYKIDLKSRGGHLSNATRVEKHLTSTLAGKPVALLTVRD
                     LQTWRNGLKEKMEPSSVNRTRTGLRAALELAATLDHRITNRHVFRLGLRGLPGSNKAR
                     RIVLPDADVLRILKAAYDVDRAFGLLVEVLAVTGARLSQAARLTCADLQAERSDPRLM
                     MPSSFKGRGQKKITHRPVPITPALAAVLKNAKGDRPADAPLLRKRDGTAWQATSTDDH
                     RDLFRRAVERAELGVAGVTSYA"
     gene            1150..1611
                     /locus_tag="VIQ50_10195"
     CDS             1150..1611
                     /locus_tag="VIQ50_10195"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9360796.1"
                     /translation="MECYGRLWRPAKPYRGTAQSTLDLLEGRVEMQFGTIPPALTHIR
                     AGKLRALAVTSAARNPALPEVPTLAESGLQGYECSLWQAIVAPAAASPALITRLNREI
                     GAVLDDPELRAAFVKNGIEAQASSPAELGARINADAKKWRDVIISAGIRAN"
     gene            complement(1705..2676)
                     /locus_tag="VIQ50_10200"
     CDS             complement(1705..2676)
                     /locus_tag="VIQ50_10200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9360797.1"
                     /translation="MSYLLRFVSIAVLSLLMPTAQAAESYPDRVVRIVNPYPPGGSVD
                     VMARILAQKLTEALGQQVIVENRSGGGGNTGSDFVAKSEPDGYTLLFTAPGPLTVNQT
                     LYGKLPFDPAKDFAPVALFATAPIVLIVNPGLPAYNVQELIALARKQPGKINFASAGI
                     GTTNHLSGELFKSMAKIDIVHVPYRGAGPAMNDLVAGHVQMFFDLMPVVLPQIAAGNV
                     RPLANAGAKRPAALPDLPTVAEQGLAGFDASSWYGLVAPAKTPEPVLAKLRDDVAKIL
                     DAPDVVARIRELGSEPGAVSGNDFAAFLAAETKKWAEVIRASGAKAD"
     gene            3011..>3449
                     /locus_tag="VIQ50_10205"
     CDS             3011..>3449
                     /locus_tag="VIQ50_10205"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9360798.1"
                     /translation="MSKLRLTFACGPYDRTLALRDGSVQPEGIEINYIASQPPDIFWR
                     MLQFNEFEISEMSLSNYATLVSTGEAPFIAIPVFPSRVFRHGYFFINTEKGIKTPADL
                     KGRRGGVPEYTMTAAVYMRGLLEHEYGVKPSDVEWVQGRADRLG"
BASE COUNT          649 a         1082 c         1074 g          644 t
ORIGIN      
        1 gcgtaactgg tgaccccagc aacaccgagc tcagcccgct caacagcgcg tcgaaataga
       61 tcacggtgat cgtccgtgga cgtcgcctgc cacgcggttc cgtcgcgttt gcgcaacagc
      121 ggtgcgtccg cgggtcgatc gcccttcgcg ttcttgagca cggccgcgag cgccggagtt
      181 atcggcactg gtcgatgggt gatcttcttc tgcccacgcc ccttgaacga tgacggcatc
      241 atcagacggg gatccgatcg ctccgcttgt agatccgcgc atgtgagccg agccgcctgc
      301 gataaccgcg cgccggtcac cgccagaact tcaaccagca atccgaaggc gcgatcgacg
      361 tcgtaggccg ccttgagtat acgcagcaca tccgcatccg gcagcacaat gcgacgcgcc
      421 ttgtttgaac ccggcagacc acgaaggccc agccggaaca cgtggcggtt tgtgattcgg
      481 tgatcgagcg tcgcggctag ttccaacgcc gcgcgcaagc cggttcgggt gcggttgacg
      541 ctcgacggct ccattttctc cttgaggcca ttgcgccacg tctgcaaatc ccggacggtg
      601 agcagcgcca ccggcttgcc ggccagcgtg ctggtcaggt gcttctcgac cctggtcgca
      661 ttgctgagat ggccgccccg gctcttgaga tcgatcttgt atcgcgccaa tgcatcagca
      721 accgtcatgg gcttgctgtc ggcggtatcg gccttgccgc gggccagcgc cttgcctgcg
      781 tcgccggcct ggtggaaggt gaggacatgc gtgccgtccg gttcctcaaa gtcatcggcc
      841 accgcaaagc ccttggtcca gtagccgccg tgaccgttgg aggcctttat cacccacgtt
      901 ccgttggtcc tgttcctgcg atagagaaga tgaattcctc gcgcgagggc tggtccggta
      961 tatggcttct ttcggatggg tagacgcagt ctcgcgctgc gactctccag ttttgagtcc
     1021 cgtattttgc gtgccatggc atccctagtg tcccatgaac tgtctccaac atgggcatgg
     1081 aagcctgtgg aggccctaag acgtaagtgg acataaattg ccgcacatca agatgttacg
     1141 gcaacgaccg tggaatgcta tggaaggctg tggaggcctg caaagcccta tcgcggcacc
     1201 gcgcagtcca cgctcgatct gctcgaaggc cgcgtcgaga tgcagttcgg gaccatcccg
     1261 ccggcgctga cgcatattcg cgcgggtaag ctgcgggcct tggcggtgac cagcgcggcg
     1321 cgtaatccgg ctctgcccga ggtgccgacg ctcgccgaat cgggcttgca aggctacgaa
     1381 tgttcgctgt ggcaggcgat cgtcgcaccg gccgctgcat cacccgcgct catcacacgg
     1441 ctgaaccgcg agattggcgc tgttctcgac gatcctgagc tgcgcgccgc gttcgtgaaa
     1501 aacggcatag aagcgcaggc aagttcgccc gcggagctgg gcgcgcgtat caacgccgac
     1561 gcgaagaaat ggcgtgatgt catcatcagc gcggggattc gcgcgaattg actttgtgca
     1621 aactgcaagt gccgtcgaat ttagaaatcg ttggcttaaa atgccgtcag cgcgtggcac
     1681 ccaccattcg catgggatcg acaatcaatc cgctttcgcc cccgaggcac ggatgacctc
     1741 ggcccatttc ttggtctccg ccgccaggaa tgccgcgaag tcgttgccgg agaccgcgcc
     1801 gggctccgaa ccaagctcgc ggatacgcgc gaccacgtcg ggcgcatcga ggattttggc
     1861 gacatcgtcg cgcagtttcg caagcaccgg ttctggggtc ttcgccggag ccacgaggcc
     1921 gtaccaggag gaggcatcaa aaccggcgag cccttgctca gcgaccgtgg gcagatcggg
     1981 cagtgccgcg ggccgcttcg ctcccgcgtt ggcgagcggg cgcacattgc cggcggcaat
     2041 ttgcggcaac accaccggca tgaggtcgaa gaacatctgg acgtgcccgg ccacgagatc
     2101 gttcatcgcc ggtccggcgc cgcgataggg aacgtgcacg atgtcgattt tggccatgct
     2161 cttgaacagc tcaccggaca gatgattggt cgtgccgatc cccgccgagg caaaattgat
     2221 tttgcccggc tgtttccgcg ccagcgcgat tagctcctgc acgttgtacg ccggcaggcc
     2281 aggattgacg atcagcacga tgggcgcagt cgcaaacagc gcgacgggag caaagtcctt
     2341 tgccgggtcg aacggaagct tgccgtaaag ggtctggttg acggtgagcg gcccgggcgc
     2401 agtgaacagg agcgtgtagc cgtcgggctc cgacttggcc acgaaatcgc tgccggtatt
     2461 gccaccgccg ccggagcgat tctcgacgat gacttgctgg ccgagagcct ccgtgagctt
     2521 ctgtgccaga attcgcgcca ttacgtcgac cgatccgccc ggcggatagg ggttgacgat
     2581 gcgaacgacg cgatccggat agctctccgc ggcctgagca gtgggcatga gaagtgacag
     2641 cacggcgatg gagacgaaac gtaagaggta tgacatccgc gtaccttcca tgcgctccca
     2701 ttctgacccg gcagccgaac ctatgtcata tcgcccagtg ccgaccagcg cccagtcatg
     2761 cggcacaggc aatcacgccg gtcgaattga cgcacaatga ggctgcatgg cgggccaaga
     2821 ccgtctcgtg gcgctgaacg ttccggcgcg tggtgaggct gcccggcttg acagtactca
     2881 agcctcgcga cagcgtcggc ttaggtgaat gatccgtcgt tgccgggtcc aattctgcga
     2941 tcctggtctg acgaaaaata cataccgggc caatcccgcg caggacatcg gccggacgag
     3001 gaaccatgcc atgagcaagc tgcgcctaac cttcgcgtgc ggcccctacg accgcacgct
     3061 tgcgctgcgc gacgggtcgg tacaacccga gggcatcgag atcaattaca tcgcctcgca
     3121 gcctcccgat attttctggc gcatgttgca atttaacgag ttcgagatct cggagatgtc
     3181 gctgtcgaac tacgccacgc tggtgagcac cggcgaagcg ccgttcatcg ccatcccggt
     3241 atttccgtca cgcgtgttcc gccacggcta cttcttcatc aacaccgaaa aggggatcaa
     3301 gacaccggcc gacctcaaag gcaggcgcgg gggagtacct gaatacacca tgaccgcagc
     3361 ggtctacatg cgcggcctgc ttgagcacga atacggcgtc aagccgagcg atgtggaatg
     3421 ggtccagggc cgcgccgacc ggctcggcc
//
LOCUS       DATCWM010000519         3321 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_290022, whole genome shotgun sequence.
ACCESSION   DATCWM010000519 DATCWM010000000
VERSION     DATCWM010000519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3321)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3321)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3321
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_290022"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1087)
                     /gene="proB"
                     /locus_tag="VIQ50_10210"
     CDS             complement(<1..1087)
                     /gene="proB"
                     /locus_tag="VIQ50_10210"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004349 - glutamate 5-kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HEY9360799.1"
                     /translation="MSRKAPSLADFRRLVVKVGSSLLVDSDGGRMHDAWLSSLVADIA
                     KLHQSTRDVLVVSSGAIALGRAVLKLPAGPLKLEDSQAAAAVGQIALARTWSEVLGRH
                     GITAGQLLVTLQDTEERRRYLNARSTIDKLLDWRAVPVINENDTVATNEIRYGDNDRL
                     AARVATMASADLLVLLSDVDGLYDSPPAEDATAELVPLVEGITPGIEAMAGAAGSELS
                     RGGMHTKIEAAKIATQAGTHMVIASGRIAHPLEAIASGARCTWFLTPANPITARKKWI
                     AGSLEPKGVLTIDAGAVAALRSGKSLLPAGVIQVDGSFARGDAVVIRGPDGLEVGRGL
                     VAYDAQDALKIKGRPSADILSLLGFGGR"
     gene            1181..2011
                     /locus_tag="VIQ50_10215"
     CDS             1181..2011
                     /locus_tag="VIQ50_10215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HEY9360800.1"
                     /translation="MSKVFIGTSGWTYDGWRGPFYLETLRKSDWLTWYASQFPTTEIN
                     GSFYRTPSLDAVRSWRDQTPRDFLFAWKASKFITHWKRLGETCPNSIELMESRLKALS
                     PKVAAVLFQLPPQFSKNRDRLAAFLEMLPRGYRFAFEFRHKSWYDDDVFSLLHEHDVS
                     LCLSDHHDAPSPWQVTARHVYVRAHGPTGRYKGNYSDRRLRAWADAIVGWRRQRRPVF
                     VYFDNDQKSAAPADARRLMEMLKSIGADQGVGEARPDRSVAQPPGYQALTAALGRSSS
                     "
     gene            complement(1957..2991)
                     /gene="obgE"
                     /locus_tag="VIQ50_10220"
     CDS             complement(1957..2991)
                     /gene="obgE"
                     /locus_tag="VIQ50_10220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HEY9360801.1"
                     /translation="MKFLDEAKVYVRSGDGGNGCVSFRREKFIEFGGPNGGHGGRGGD
                     VIVEAVDGLNTLIDYRYQQHFKAKNGRAGMGKDRHGASGQDIVLKVPAGTQVYEENGE
                     VLLADLTEVGQRAVIARGGNGGFGNAHFKSSTNRAPRHANPGQPGEELTIRLRLKLIA
                     DAGIVGLPNAGKSTFLSAVSAAKPKIADYPFTTLHPQLGVVEIDGREFVLADIPGLIE
                     GAHAGTGLGDRFLGHVERCRALLHLVDGTLEHAGVAYKTVRAELAAYGEGLDEKPEVV
                     ALSKADALTPEQLKRQSALLKRAAKAKPLVVSAATGLGVSDVLRALLQIIDQDEERPR
                     AAVKAWYPGG"
BASE COUNT          571 a         1072 c         1068 g          610 t
ORIGIN      
        1 cgcggccgcc gaacccgagg agcgagagaa tgtcggcgga ggggcggcct ttgatcttga
       61 gtgcgtcctg cgcgtcatag gcgacgaggc cgcgaccgac ctcaagtccg tcgggcccgc
      121 ggatgaccac ggcatctccg cgcgcgaaac taccgtcgac ttggatgacg cccgcgggca
      181 gtaggctctt gccactgcgc aacgcggcga ccgcgccagc atcgatcgtc aggactccct
      241 tgggctcgag ggagcccgca atccatttct ttcgcgccgt gatcggattg gccggcgtga
      301 gaaaccaggt gcaacgcgcg ccgctcgcga tcgcctcgag cggatgcgcg atgcgaccgg
      361 atgcgatgac catatgcgta ccggcctgcg tagcgatttt cgcggcttcg atcttggtgt
      421 gcatgccgcc gcgggaaagt tcggaacccg cggcgcctgc catcgcttcg atgccgggcg
      481 tgatgccctc gaccaggggc accagctccg ccgtggcatc ctccgccggc ggcgagtcgt
      541 agaggccatc gacatcggat aagagcacca gaagatctgc gctggccatg gtggcgacgc
      601 gggcggccag ccgatcgttg tcgccgtaac ggatttcgtt ggtcgcaacg gtatcgttct
      661 cgttgatcac cggcacggcc cgccagtcga gcaatttgtc tatcgtcgag cgcgcattga
      721 gatagcgccg gcgctcctcg gtatcctgca gcgtgaccaa gagctgcccg gccgtgatgc
      781 cgtgccgccc gagcacctcc gaccacgtgc gcgccagcgc gatctggccc acggcggcgg
      841 cggcctggct atcctcgagc ttcagcggcc cggccggcag cttgagcacg gcgcgcccga
      901 gcgcgatcgc tcccgaggag actacgagca catcgcgcgt gctttgatgc agcttggcga
      961 tgtcagccac gagcgaggag agccaagcgt cgtgcatgcg tccgccgtcg ctgtcgacca
     1021 gcagcgagga gccgaccttt accaccaagc ggcggaaatc ggcgagagaa ggcgctttgc
     1081 gggacatgct gagggttcgt ctgaccggca ggcgacaacc attgtcgcac tgaggcgttg
     1141 tttagcatgc gtcttcgggt ccgcgccaag gtgtgacggc atgagcaagg ttttcatcgg
     1201 tacttcgggc tggacttatg acggttggcg cgggcccttc tacctcgaga ctttgcgaaa
     1261 aagcgattgg ctcacctggt acgccagcca atttccaacg acggaaatca acggttcatt
     1321 ctaccgcacc ccgtcgctgg atgcggtgcg gtcgtggcgc gatcagaccc cgcgggattt
     1381 cctgttcgcc tggaaggcct ctaagttcat cacccattgg aagcggctcg gcgagacatg
     1441 cccgaactcg attgagttga tggaaagccg actcaaggca ctttcgccga aggtcgccgc
     1501 ggttctgttc cagcttccac cgcaattttc gaagaatcgg gatcggctgg cggcgttcct
     1561 tgaaatgctc ccgcgcggct accgcttcgc attcgagttt cgccacaaga gttggtacga
     1621 cgacgatgtc ttcagtctgc tgcacgagca tgacgtttcg ctctgtctct cggaccacca
     1681 cgacgcgccc tccccgtggc aagtgacggc gcgccacgtt tacgtgcgcg cacacgggcc
     1741 taccggccgc tacaagggca attattcgga tcggaggctg cgcgcctggg cggacgctat
     1801 cgttgggtgg cgccgccagc ggcgaccggt gttcgtctat ttcgacaacg atcaaaagag
     1861 cgccgccccg gccgatgcgc gcaggctgat ggagatgctc aaatcgatcg gagctgatca
     1921 gggggtgggc gaggcgaggc cggacaggtc agtcgctcag ccgccgggat accaggcttt
     1981 gacggcggcc ctcggccgtt cttcgtcctg atcgatgatc tgcaagagtg cgcgcaggac
     2041 gtcggagacg ccgagtccgg tcgcagccga gacgaccagt ggcttcgcct tggcggcgcg
     2101 tttgagcagt gcgctctgcc gcttcaactg ctcgggcgtc agtgcgtcgg ccttgctcag
     2161 cgccacgacc tcgggttttt cgtcgagccc ctccccatag gcggcaagct ccgcgcgtac
     2221 ggtcttgtag gctactcccg cgtgctcaag ggtgccgtcg acaagatgca ggagcgcgcg
     2281 gcagcgctcg acgtggccga gaaaacggtc gccaagtccg gtgcccgcgt gggcgccttc
     2341 gatgaggccg gggatatctg ccagcacgaa ttccctgccg tcgatctcga ccacaccgag
     2401 ttggggatgc agcgtcgtga acggataatc ggcgatcttc ggtttggctg cgctcactgc
     2461 cgagagaaag gtcgatttgc ctgcgttagg cagcccgaca atgccggcgt ccgcaatcag
     2521 cttaagacgc aaccggatcg tcagttcctc accgggctgg ccggggttgg cgtggcgcgg
     2581 cgcacggttg gtcgaactct tgaaatgggc gttgccgaag ccgccattgc ctccgcgcgc
     2641 gattaccgcg cgctgaccga cctcggtgag atccgcgagc aagacctcgc cgttctcttc
     2701 atagacctgc gttccagcgg gcactttcag cacgatatcc tgaccgctcg caccgtggcg
     2761 gtccttgccc atcccggcgc ggccgttctt ggccttgaaa tgctgttggt agcggtagtc
     2821 tatgagcgtg ttgaggccat cgaccgcctc tacgatcacg tcgccgcccc tgccgccgtg
     2881 gccgccgttc ggtccgccaa attcgatgaa tttttcccgc cggaacgata cgcagccgtt
     2941 cccgccatcg ccggatcgta catagacctt ggcttcatcg agaaatttca tgacgcacga
     3001 tatgcgatcg cggacgcaaa atacgagagc ccgcacggac acgcggcccg cacggcgcaa
     3061 acaaaatccg gcacgaaggt gaggtgatgg cgagtatccg tcgggagggg ccagggcggg
     3121 ccatgcctca ctgatgcggc ccaagaggcc gctcccgacg ctaccgttcg cgaagtctgc
     3181 cgctacgcct cggcccgaac gctgccgcgg cgatcatcgc ggccaaagtg acccgggggc
     3241 attgcacctc cctcggttga gtgcgtgtca ccccgacagt gaccggacac agtcacaatc
     3301 ctcgtcatcg ccagcgccgc t
//
LOCUS       DATCWM010000520         2967 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_462625, whole genome shotgun sequence.
ACCESSION   DATCWM010000520 DATCWM010000000
VERSION     DATCWM010000520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2967)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2967)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2967
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_462625"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..820)
                     /locus_tag="VIQ50_10225"
     CDS             complement(<1..820)
                     /locus_tag="VIQ50_10225"
                     /inference="COORDINATES: protein motif:HMM:NF039346.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY9360802.1"
                     /translation="MANKMPREIAPGVFWIGDCLAQRHKGKVYHGYNAAFLVAGASAS
                     VLVETGHPKDFPVIERHLAELFARGVPPLKYLFVTHQETPHCGGLGRILTRFPETILC
                     GDVSDYHLAFPQFEHRMRWMKEGDAIDLGGRSLMAVEPVIRDLRTTWWGFDTGERVLF
                     PGDGFASSHYHQDGHCGLVAEEAVSLDLPDVSAVFADLALFWTKFANMEAYCDRLDHL
                     IERLGVKTIAPTHGLPITDVEATVPKVKEGLKAAALVPESGTNEKASSVAAPAPA"
     gene            complement(823..1737)
                     /locus_tag="VIQ50_10230"
     CDS             complement(823..1737)
                     /locus_tag="VIQ50_10230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360803.1"
                     /translation="MSVLTQPAPRNARETSGFAGGIAALAKGKLYALQNPFVLDGRVS
                     SYPASARGYSVANSFLLTQSDAAMLIDTGFGKDEPVIRAQIESLIAPGLPLSLFPLRL
                     NEFMSINNVETFAGHFNVETCYTSNVDAALWFDFGARANGRSVLESMKVTAVSRADTI
                     QLGNKGRAIDVMQAPIRLIATRWLYDRATRTLFSSDMFTHVWRARAEGPWIVTDVDDA
                     TSPRDLRSFLLNTRYWWLEGAPTDSIRRGIADVFDKCDVETIAPGYGCILHGRKVVAR
                     HVEMLDEIFKGLDKSVAVSRYVDRDEER"
     gene            complement(1811..2104)
                     /locus_tag="VIQ50_10235"
     CDS             complement(1811..2104)
                     /locus_tag="VIQ50_10235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360804.1"
                     /translation="MIPFVPIAFAVLALFAWRYDTRARRAYEATLSGAEKRQFRALRR
                     VHPSQWRATIALKHAETGIASTQDNAPRAPKKRSRTSATRRTARKRKAGAKTR"
     gene            complement(2184..2666)
                     /locus_tag="VIQ50_10240"
     CDS             complement(2184..2666)
                     /locus_tag="VIQ50_10240"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEY9360805.1"
                     /translation="MTELATRKRFGVVADEQQRALSGIEFVQGLADGTLPLNSMAQTL
                     GYDIIKVAKGHVVAAVEPHAGHLNPSATVHGGLAATLLDSAMGLAIRTMLEKGFAQTT
                     LEFKISMVRPITPQTGLVKAEGKVISCGRRIGTAEGTVRDTNGRVLAHGTTTCLIFEL
                     "
BASE COUNT          488 a          960 c          998 g          521 t
ORIGIN      
        1 ccgccggtgc gggggcggcg acgctgctcg ccttctcgtt cgtccccgac tccggtacca
       61 gcgcggcggc cttgagccct tccttgacct tgggcaccgt cgcttccacg tcggtgatcg
      121 gcaggccgtg ggtcggcgcg atggtcttga cgccgagccg ctcgatcaaa tggtcgagcc
      181 gatcgcaata ggcctccata ttggcgaact tggtccagaa caaagccagg tccgcgaaca
      241 ccgccgagac gtcgggcagg tcgagcgaga ccgcctcctc ggcgacgagc ccgcaatggc
      301 cgtcctggtg atagtggctg gaggcgaagc cgtcgccggg aaacagcacg cgctcgcccg
      361 tgtcgaatcc ccaccaagtc gtgcgcaggt cgcggatcac cggctcgacc gccatcaggc
      421 tgcggccgcc gagatcgatc gcgtcgccct ccttcatcca gcgcatgcgg tgctcgaatt
      481 gcgggaaggc gaggtggtaa tcgctgacgt cgccgcacag gatcgtctcg ggaaagcgtg
      541 tgaggatacg cccaagcccg ccgcaatgcg gtgtctcctg atgggtgacg aacagatatt
      601 tcagtggagg cacgccgcgg gcgaagagct ccgccaggtg ccgctcgatc accggaaagt
      661 ccttcgggtg gccggtctcg accagcaccg aagcgctcgc tccggcaacg aggaatgcgg
      721 cgttgtagcc gtgatagacc ttgcccttgt ggcgctgcgc caggcagtcg ccgatccaga
      781 acaccccggg cgcgatctcg cgcggcattt tgttggccat gctcagcgct cctcgtcgcg
      841 gtcgacgtag cgcgacaccg ccacgctctt gtccagtcct ttgaaaatct cgtcgagcat
      901 ctcgacgtgc cgcgccacga ccttgcggcc gtgcaggatg caaccgtagc cgggcgcgat
      961 cgtctcgacg tcgcatttgt cgaacacgtc ggcgatgccg cgccggatcg agtcggtcgg
     1021 cgccccttcc agccaccagt agcgcgtgtt gagcaggaac gatcgcaagt cgcgcgggga
     1081 ggtcgcgtca tcgacatcgg tgacgatcca gggtccctcc gcgcgggcgc gccagacatg
     1141 ggtgaacatg tcggaggaga acagcgtgcg cgttgcgcgg tcgtagagcc agcgcgtggc
     1201 aatcaggcgg atcggcgcct gcatgacgtc gatcgcccgg cctttgtttc cgagttggat
     1261 ggtatccgcc cggctcaccg ccgtgacctt cattgattcg agcacgctgc ggccgttcgc
     1321 cctggcgccg aaatcgaacc acagcgccgc gtcgacattg ctggtgtagc aggtctcgac
     1381 gttgaagtgc ccggcgaaag tctcgacgtt gttgatcgac atgaattcgt tgagccgcag
     1441 cggaaacaac gacagcggca agcccggcgc gatcagcgac tcgatctgcg cgcggatcac
     1501 cggctcgtcc ttgccgaagc ctgtgtcgat cagcatcgcc gcgtcgctct gggtgagcag
     1561 gaaactgttc gccaccgaat agccgcgcgc gctcgcggga taggagctga cgcggccgtc
     1621 gagcacgaac ggattctgca gcgcgtagag cttgcccttg gcgagcgcgg caattccgcc
     1681 ggcaaagccg ctcgtctcgc gagcgttgcg gggcgcgggc tgcgtcaaga ccgacatggc
     1741 gcaaccttat cgggcttacc cggcgaaggg aacagggctc acgctcacgc cgcgctgcgg
     1801 agagcgcatg tcatcgcgtc ttcgcgccgg ccttgcgctt gcgcgcggtg cgccgcgtag
     1861 cggaggtccg acttcgcttt ttcggcgcgc gcggcgcgtt gtcctgtgtg gacgcgatgc
     1921 cggtctcggc gtgcttgagg gcgatggtcg cgcgccattg cgaaggatga actcgccgca
     1981 gcgcccggaa ttgccgtttc tccgcgccgc ttaacgtggc ctcataggct cgccgcgcgc
     2041 gcgtgtcata gcgccaagcg aacagcgcca acacggcaaa cgcaatcgga acgaagggaa
     2101 tcatggccga atggatagca cagatcgggc aggcgcgcgc ggcgtcgcac ctcgcaggcg
     2161 catctggctt tcgtcgttgt gcgttacagc tcgaagatga ggcaggtcgt ggtgccgtgc
     2221 gcgagcacgc gaccatttgt gtcgcgcacg gttccctcgg cggtaccgat gcggcgcccg
     2281 cagctgatga ccttgccttc ggctttcacc aggccggtct gcggcgtgat cggacgcacc
     2341 atcgaaatct tgaactcgag cgtcgtttgc gcaaagccct tctccagcat ggtgcggatg
     2401 gcgagcccca tggcgctgtc gagcaaggtc gcggcaagac caccatgcac ggtggcggag
     2461 ggattgagat gcccggcgtg cggctcgacc gcggcgacga cgtggccctt cgccaccttg
     2521 atgatgtcgt agccgagcgt ctgcgccatg ctgttgagcg gcaacgtgcc gtcggcgagc
     2581 ccctgcacga actcgatgcc gctgagcgcg cgttgctgct cgtcagcgac gactccgaag
     2641 cgtttgcgag ttgcgagttc ggtcatgatc gatttgtgag gatcgcacgc cagtaagtcc
     2701 gacacactcc atttcttgcc gcggaattca gccgcgccga ggtgcgagac cgcgcgtaga
     2761 tggttaacgg gccccggccg ggtggccaag cgccccgggc gccgcagatc gagcctgcct
     2821 ccgttccgcc gcatccgggt ggcaaggatg gcgaatccac gcatttcgaa ggggccgaac
     2881 atgtatcgat cgttgggggc tgcagcctta ctcgccattg ccattgccgc gccggttaag
     2941 gacgcggccg cgcaggaccc ggtgggc
//
LOCUS       DATCWM010000521         8265 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_219719, whole genome shotgun sequence.
ACCESSION   DATCWM010000521 DATCWM010000000
VERSION     DATCWM010000521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8265)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8265)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8265
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_219719"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..402
                     /locus_tag="VIQ50_10245"
     CDS             <1..402
                     /locus_tag="VIQ50_10245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9360806.1"
                     /translation="GGVATLLLGSVLQGVALFLYLLFDGLDSLYVISALFGLFQGGIV
                     PMYAIIVRQYFSPREAATRVGLVLLATLLGMALGGWMSGALFDLTGSYRAAFVNGLIW
                     NLLNVSIALWLLMRTAGGPRMGEARLKHARL"
     gene            complement(484..975)
                     /locus_tag="VIQ50_10250"
     CDS             complement(484..975)
                     /locus_tag="VIQ50_10250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HEY9360807.1"
                     /translation="MFVVSYRCAAIGLACLLVTPASAQLLARKDLSAAIAVDIVQTAM
                     ATCSANGYRVSATVVGRNGEVLVQIRGDGTPPHTMENSFKKAFTARTFRIPSGEMEER
                     LKKNPQMGAQYLTGFTTARGALPIMVGEDVVGAAGVSGAPGGEKDEACVKAALDKVAD
                     QLK"
     gene            1192..2175
                     /locus_tag="VIQ50_10255"
     CDS             1192..2175
                     /locus_tag="VIQ50_10255"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9360808.1"
                     /translation="MSARRILVTGGSGFLGSALVKALVRRGEAVRVFDDNSRGALRRL
                     REVERDIEFVNGDIRDAAAVDGAMRGVEEVHHLAFVNGTATFYSAPDLVLDVGVKGIV
                     NVIDACRHRGAGRLILASSSEVYQTPPRVPTDESAPLVVPDPLNPRLSYAAGKIISEM
                     MAINQGRKHLERVLIFRPHNIYGPDMGFDHVIPQFAVRLKRSLDKHASGAVAFAIQGS
                     GAETRSFCHVDDLVQGVMVMRDKGEHLGIYHVGSTEEVSIADLARRMANIVGREIVLV
                     PSELREGSTPRRCPDISKLAALGYRPGISLDQGLPATLKWYWDHESVAPAA"
     gene            2172..3461
                     /locus_tag="VIQ50_10260"
     CDS             2172..3461
                     /locus_tag="VIQ50_10260"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF020073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY9360809.1"
                     /translation="MSRSLKEIALRPGKVARAAGSGASVPVECCQVCGHAPLSKVLSL
                     GYMPPVNQMVAVGEVPRQQPWFPTDLMHCAECELVQLGLAVDPVIIFPPEYPYTSGTT
                     KLLRDNFAELYCEASAMLKLAAQDLVIDIGSNDGTLLSNFKKHRILGIEPTEVGKIAD
                     GRGVPTLMRYFVPAVAAEVKHEHGPARVVTAANCFAHIEDVHSIVQGILDLLAPDGVF
                     ISESHYLIGLLDRLQYDTVYHEHLRYYSLTSLANLLSMHGLEVFHARAIPTHGGSIRV
                     YAARQGAWPVDESVAKMLAAEPRGEAMLARLKRFRNDVMLSKLRLLAMIRELKEQGAR
                     ICGISAPSRASTLVNYLGLDEAIIDYICEIAGSLKIGKCMPGTSIPVVEESRLFSDQP
                     DCAVIFSWHIADELAPKLRAKGYRGKLVTPLPVPREL"
     gene            3565..4806
                     /locus_tag="VIQ50_10265"
     CDS             3565..4806
                     /locus_tag="VIQ50_10265"
                     /inference="COORDINATES: protein motif:HMM:TIGR03026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003979 - UDP-glucose 6-dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HEY9360810.1"
                     /translation="MNIAGSKPTAATSARVEGADLTVIGGAGHVGVPLVLAFAEAGYR
                     VNVHDLNRDALATLRSGRLPFIEHGGEELLLRALKRDRLVFTSSPADISQTGPLIIAI
                     GTPIDEFLNPVRQVVQDCIDALLPHLADGRLLVLRSTVFPGTTDWLDAYLRRKNRNLK
                     VAFCPERMVQGHGIKELKETPQIISGTTPAAEEEAAKLFSAIAPELIAVQPREAEFAK
                     LFSNAYRYIEFATANQFYLIAKSAGLDFRNIYDAMKRNYPRARGIPTPGFAAGPCLMK
                     DTMQLAAFAQNQFSLGNAAMLVNEGLVLNVCDDLRRRYDLSRITVGLLGMAFKADIDD
                     TRASLSYKFKKALAGLAQAVLTTDPFVTTDPDLLPLDEVITRSDVLILCAPHSAYRDL
                     DFAGKPAVDVWGYLRKANVIG"
     gene            5002..5517
                     /locus_tag="VIQ50_10270"
     CDS             5002..5517
                     /locus_tag="VIQ50_10270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360811.1"
                     /translation="MKLSGRSKAVLCAVLHRCAVALAAAVLAGSAAHADPSSQQPATV
                     EFVCLHGSVKSVMAAAHFNRIAKERQLPFVAVARGVDPDREIPASIRQGLAQDGLTPA
                     DEVPHALTADEASAAATVFAFDEVPSDRKGNATVTYWRNMPPASKDYSAARDAIVRRV
                     EEAAASLTSRR"
     gene            6144..6722
                     /locus_tag="VIQ50_10275"
     CDS             6144..6722
                     /locus_tag="VIQ50_10275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY9360812.1"
                     /translation="MGGVAALPAQAAAPETSSDEMLIKRIARGDQLAMRTLFGRHRVL
                     LYRWFLRLVRDEALAEDLLSDVFLDVWRQAAAFEARSSVSTWLLAIARYKALSARRRP
                     TDAELDEKVASTVADTADDPEVALQKKTRAELLRHSVARLSPEHGEVINLVYFHGKSI
                     KEVAEIVGIAEATVKTRMFYARKKLADFVAAA"
     gene            7043..7900
                     /locus_tag="VIQ50_10280"
     CDS             7043..7900
                     /locus_tag="VIQ50_10280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015316694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEY9360813.1"
                     /translation="MVKDTVLAFIDDEALSRGAAIAFYTVTSIAPVLLIVIAIAGLAF
                     GRDAAQNGITEQLSGLMGRQTAEVLQTAVASAASKSSGVVATIIGIITLIVTASGVFG
                     EMQTALNVIWKAKPEGTTVSRLIRGRAASLGLVAALGFLLMVSLVVSTLLTAFGNYLN
                     SILPFGQVILTVLNVIVSLVLISFLFAAIYKVLPDRDLEWGDVVVGAIVTAVLFTAGK
                     SLISWYLGSSAVASSFGAAGALIVLLLWVYYSAQIFLLGAEFTKVYANSHGSKQGAPV
                     SEHAPSPST"
BASE COUNT         1488 a         2564 c         2569 g         1644 t
ORIGIN      
        1 ggcggcgtgg cgacgctgct tctgggctcc gtcctgcagg gcgtggcgct gtttctctac
       61 cttctgttcg acggcctcga ctcgctgtac gtgatctcgg cactgttcgg gctgttccag
      121 ggcggcatcg tgccgatgta cgcaatcatc gtgcgccagt atttctcgcc gcgcgaggcg
      181 gccacccggg ttggcctcgt gctactggca accttgctcg ggatggcact cggcggttgg
      241 atgtccggcg cgctcttcga tctcaccggc tcctaccgcg cggccttcgt caacggcctc
      301 atttggaatc tgctgaacgt ctcgatcgcg ctgtggctgc tcatgcgcac ggcaggcggg
      361 ccgcgcatgg gcgaggcacg cctgaagcac gctcgtctgt gaggcgaaac ggtcagccgg
      421 cttgcaccct ccctctcccg caggattacg ggcaaagggt gcagaccgaa tttgccgccg
      481 cgttcatttg agctgatcgg cgaccttgtc gagggcggcc ttcacgcacg cttcatcctt
      541 ctcgccgccg ggagcgccgg agacgccggc cgcgccgacc acgtcctcgc cgaccatgat
      601 cggaagcgca ccgcgcgcgg tggtgaagcc ggtgagatac tgcgcgccca tctgcggatt
      661 cttcttcagc cgctcttcca tctcacccga ggggatgcgg aaggtgcgcg ccgtaaaggc
      721 tttcttgaag ctgttctcca tggtgtgcgg cggagtgccg tcaccgcgga tctgcaccag
      781 cacctcgccg ttgcgtccga cgacggtcgc cgaaacgcgg tagccgttcg cgctgcaggt
      841 ggccatcgcg gtttgcacga tatcgacggc aatggccgcg gaaaggtcct tgcgcgcgag
      901 tagttgggcg ctggcgggcg tcaccaacag acaggccagt ccgatcgcgg cgcagcgata
      961 cgacaccaca aacatgttga gatcctcccc ttaagcgtta cgcgggaccg ttgcttgcgg
     1021 tccgccagaa aagcctatcc catttcaccc ggtttgtatg ggctcaattc cgcctagtcg
     1081 tagcgcggtc acggcagtcg ctgcgtctcg acagaggcgg ctgtctcgga tttcgcctcc
     1141 gcgcacccga tatggtatgc gggcggcggc agaaggcggg aatgtcaggc gatgagcgca
     1201 cggcgcattc tggtcaccgg cggcagcggc tttctcggct cggcgctggt caaggcgctt
     1261 gtgcgtcggg gcgaagcggt gcgggtcttc gacgataatt cccgcggcgc cttgcgccgg
     1321 ctgcgtgagg tcgagcgcga catcgagttc gtcaacggcg acatccgcga tgccgccgcc
     1381 gtcgatggcg ccatgcgcgg cgtcgaagag gtgcaccacc tcgcctttgt caacggcact
     1441 gcgactttct acagcgcccc cgatctcgtg ctcgatgtcg gcgtcaaggg catcgtcaat
     1501 gtcatcgacg cctgccgcca ccgcggggct gggcggctga tcctcgcatc gagctcggag
     1561 gtctaccaga cgcccccgcg tgtgccgacc gacgagagcg cgccgctcgt cgttcccgac
     1621 ccgctcaatc cgcgcctctc ctatgccgcc ggcaagatca tcagcgagat gatggccatc
     1681 aaccaaggcc gcaagcacct cgaacgggtg ctgatcttcc gcccgcacaa catctacggg
     1741 cccgacatgg gattcgatca tgtgatcccg caattcgccg tccggctgaa acgctcgctg
     1801 gacaaacatg cgagcggcgc ggtggcgttt gcgatccaag gcagcggcgc cgaaacccgc
     1861 agcttctgcc acgtggacga tctggtgcaa ggcgtgatgg tcatgcgcga taagggcgag
     1921 cacctcggca tctatcacgt cggcagcacg gaggaggtca gcatcgccga tctcgcccgg
     1981 cgcatggcca acattgtcgg acgcgagatc gtgctcgtcc cgtccgagct gcgcgagggc
     2041 agtacgccgc gccgctgccc agatatttcg aaactcgccg cgctcggcta tagacccggt
     2101 atctcgctcg accaaggcct gccggccacg ctcaaatggt attgggatca cgagagcgtg
     2161 gcgccggcgg catgagccgc tcgctcaagg agattgcatt gcgtcctggg aaagtcgccc
     2221 gcgccgccgg cagcggcgcc agtgttccgg tggaatgctg tcaggtctgc ggccatgcgc
     2281 cgctctcgaa ggtgctttcg ctcggctaca tgccgccggt gaaccagatg gtcgcggtcg
     2341 gcgaagtgcc gcggcagcaa ccgtggttcc ccaccgatct tatgcactgt gccgaatgcg
     2401 agctggtgca gctcggcttg gcggtcgatc ccgtcatcat cttcccgccc gaatatccct
     2461 acaccagcgg caccaccaag ctgttgcgcg acaattttgc cgagctctat tgcgaagcgt
     2521 cggccatgct caagcttgcc gcgcaagatc tcgttatcga catcggctcg aacgacggca
     2581 cgctgctctc gaacttcaag aagcatcgca tcctcggcat cgagccgacc gaggtcggca
     2641 aaatcgccga cggccgcggc gttccgacgc tcatgcgtta cttcgtgccg gcggtggcgg
     2701 ccgaggtcaa gcacgagcat ggccctgcgc gcgtggtgac ggcggcgaat tgcttcgcgc
     2761 atatcgaaga cgtgcattcg atcgtgcaag gaattctcga tctgctcgcg cccgacggcg
     2821 tgttcatatc cgagtcgcac tacctcatcg gtttgctgga caggctgcaa tacgacaccg
     2881 tctatcatga gcacctgcgc tattactcgc tcaccagcct tgccaacctg ttgtcgatgc
     2941 atggcctcga ggtttttcac gcgcgcgcca ttccgaccca tggcggatcg atccgcgtct
     3001 atgccgcacg gcagggcgcg tggccggtcg acgagagcgt cgcgaagatg ctggccgccg
     3061 agccgcgcgg ggaagcgatg ctcgcgcggt tgaagcgctt ccgcaacgac gtgatgctgt
     3121 cgaaactcag gctccttgcc atgatccgcg agctcaagga gcaaggcgcg cgcatctgcg
     3181 ggatcagcgc gccctcgcgc gcctcgacct tggtgaacta tctcgggctg gatgaggcga
     3241 tcatcgacta tatttgcgag atcgcgggct cgctcaagat cggcaaatgc atgccgggga
     3301 cctcgatccc ggtggtcgag gagagccgcc tgttctccga ccagcccgat tgcgcggtca
     3361 ttttttcctg gcacattgcc gacgagcttg cgcccaagct gcgcgcgaag gggtatcgcg
     3421 gcaagctggt gacgccgttg ccggttccgc gcgagctttg atggcaaggc gcacccctgg
     3481 aacctttgtg ctgcgaaggc ggctgggcta tcactcggcc gggccgccgc gatcttctct
     3541 cggcgccgag tttggagcat ttgcgtgaat atcgccggaa gcaagccgac cgcagcgacg
     3601 tctgcgcgag tggagggtgc cgatctgacg gttatcggcg gagccggtca cgtcggcgtg
     3661 ccgctcgtgc tggcattcgc cgaggccggc tatcgcgtca atgtgcacga cctcaatcgc
     3721 gatgcgcttg cgaccttgcg atcgggccgg ctgccgttca tcgaacacgg cggggaagag
     3781 ctgctgctgc gagcgctcaa acgcgatcgg ctcgttttca cctcctctcc ggcggatatt
     3841 tctcaaaccg gtccgctcat catcgccatc ggcacgccga tcgacgagtt cctcaacccg
     3901 gttcgccagg tggtgcaaga ctgcatcgac gcgttgctcc cgcatctcgc ggacggcagg
     3961 ctcttagtgc tgcgctcgac ggtgttcccc ggcacgaccg attggctcga cgcctatctg
     4021 cggcgaaaga accgcaacct caaggtcgcg ttttgcccgg agcgcatggt gcaaggacac
     4081 ggcatcaagg aactcaagga aacgccgcaa atcatcagcg gcacgacgcc cgcggcggag
     4141 gaggaggccg cgaagctttt ctccgccatc gcccccgagc tcatcgccgt gcagccccgc
     4201 gaggcggaat tcgcaaagct cttcagcaac gcctaccgct acatcgagtt cgcgaccgcg
     4261 aaccagttct acttgatcgc aaagtcggcg gggctcgatt tccgcaacat ctacgatgcg
     4321 atgaagcgca actacccgcg cgcccgcggt attccgactc ctggcttcgc cgccggtccc
     4381 tgtttgatga aagataccat gcagctcgcc gccttcgccc agaaccagtt cagcctcggc
     4441 aacgccgcca tgctggtcaa cgaaggtttg gtgctgaacg tctgcgacga tctgcgccgg
     4501 cgctatgatc tctcacgcat cacggtcgga ttgctcggaa tggcattcaa ggcggacatc
     4561 gacgacaccc gcgcttcgct gagctacaag ttcaagaagg cgctcgcggg gctggcgcaa
     4621 gcggtgctga ccacggaccc tttcgtgacc accgatcccg acctgctccc gctcgacgag
     4681 gtgataacgc gcagcgacgt cctcatcttg tgcgcgccgc attcggccta tcgcgacctc
     4741 gacttcgccg gcaaacccgc ggtcgatgtg tggggatatc tacgcaaggc gaatgtgatc
     4801 ggctaggcgt gtcacgacgc gcgactcatc ggaacgccga tgtagccgca cgtttgcttt
     4861 cggggcaaag cacgagcagc atgagaattt ctaatgaggg atagagaaat gatgctttgc
     4921 acgtaggtcc ggcacttggc agttcaggct cacttccgag cgtgggtgcg aatagcaatc
     4981 agcattcagg agaaagaaag aatgaaatta tccggtcgaa gcaaggctgt tctctgtgct
     5041 gtgctccatc gatgtgccgt tgcccttgcg gccgcggttc tggctggaag cgcggcgcat
     5101 gcagacccta gttcgcagca accggcgacg gtcgaatttg tatgtctcca tggttctgtg
     5161 aaaagcgtga tggcggcggc acatttcaat cgtatcgcaa aagagcgcca gctgccattc
     5221 gttgctgtcg ctcggggcgt cgatcccgat agggagatcc cggcgagcat tcgccaaggg
     5281 ctggcgcagg acgggcttac tcccgcggat gaggtcccgc acgctctcac cgccgacgag
     5341 gcaagtgcgg ccgcgacggt gtttgctttc gatgaggtgc cgtccgatcg caagggtaat
     5401 gcaaccgtaa cctactggcg caacatgccg cccgccagca aggactacag tgccgctcgg
     5461 gatgcaattg ttcgacgtgt tgaagaagca gcagcttccc tcacgtcgag acgctaggcg
     5521 tttcgaggcc agcttcggcc acggagccga gttgaagacg gtgtgctctc gctggtgctg
     5581 ccaaggtcga ggaagctaaa tctcacacaa ttcaagtccg atgaagggag gaggctcgcg
     5641 gtttgaaacc aagccagccg gcaaccaatg ctgccgtcta gcgtttgata cagaggacgc
     5701 cacaatcgat cagccctaac gcaaggggcg tgtatagtcg tgtcggacga aatcagaagt
     5761 aggcgcggag gcaaagctcc gccatgccca cgctgtcgag ccacgatgga ggaagtggtg
     5821 agcatcgcgc cggtggcagg cgaacctggc ttgacggcgt atgagtgccc caagtgcggg
     5881 tacgtgacga gcgtgctcca gcagccgaag gatgggcgtt agttcggcgc gcgcaatgtc
     5941 actgcgaatg ctggctgcta caaccagccc tacgagcact atttcacaag gttcccaggc
     6001 caaattaact gttgcggccg gaacacggta aattttgacg gtcgatggat cggcgtaggg
     6061 gggtgcaacc ttttacctct gagcggattg ttggggcggg acgtgactaa ggggactatt
     6121 tcatgagtat cgcttgcacc cgtatgggcg gggtggccgc tttgcctgca caggcggcgg
     6181 cgccggagac ttcttccgac gaaatgctga tcaagcggat tgcgcggggc gatcagctcg
     6241 ccatgcgcac gctgtttggc cggcatcgcg ttcttttgta tcgctggttc ctgcggctcg
     6301 tccgcgacga agccttggcc gaagacctct tgagcgacgt gtttctcgac gtttggcgcc
     6361 aagccgccgc gtttgaagcc cgctcgtcgg tttcgacttg gctgctggcg attgcgcgtt
     6421 acaaggcgct ctcggcgcgc cggcgcccga cggatgcgga attggatgag aaggtcgcat
     6481 ccaccgtcgc tgacacggcg gacgatccgg aggtcgcgtt gcaaaagaag acccgggcag
     6541 aactgctgcg ccactcggtg gcccgcctgt cgccggagca cggtgaggtc atcaacctcg
     6601 tctattttca cggcaaatcg atcaaagagg tcgcggagat cgtcgggatc gccgaggcca
     6661 ccgtgaagac gcgcatgttc tacgcgcgca agaagttggc ggacttcgtt gcagcggcct
     6721 aggacgtggt gattttttgg cgggcatgac gggcaaacag cgatagattg catctaaggc
     6781 atccgctttc agccttcctt cagtcccgct tgacggcaca gccgacaata gagaaacgac
     6841 agcaaattca gccgaagaaa gaaggatagg ccgcctctgc cggctgcctc cactttttta
     6901 tcgctaggtc ttttgatcag gcgtcgctcg tggggcagac aaactcatcc ccgggaacca
     6961 gcgtggcagc ccgccgttga ggcagtgtaa aatcgcaata tttgctgctc gtgaggtcgg
     7021 tatgttctca gccgcttgga ggatggtgaa ggacaccgtg ctcgcattca tcgacgatga
     7081 agcactgagc cgcggagctg cgatcgcctt ctacaccgtg acttccatcg cgccggtctt
     7141 gctcattgtg attgccatcg cgggactagc cttcggtcgc gatgccgctc agaatgggat
     7201 caccgagcag ttgagcggcc tcatgggccg gcaaaccgca gaggtcttgc aaactgcggt
     7261 agcgagtgcc gccagcaagt catccggtgt cgtggcgacg attattggca tcatcacctt
     7321 gattgtgacg gcctcgggcg tcttcggcga aatgcagacg gcgttaaatg tgatctggaa
     7381 ggctaagcct gagggcacca ccgtctcgcg gctaattcgc ggccgcgctg ccagtctggg
     7441 cttagtcgca gcattgggat tcctgcttat ggtgtcgctc gttgtgagca cactgctgac
     7501 ggcgttcggc aactacctca attcgattct tccattcgga caggtcatcc taactgttct
     7561 gaacgtcatc gtttctctag tgctcatttc gttcctgttc gccgccatct ataaggtctt
     7621 acccgaccgg gatcttgaat ggggcgacgt ggtggtcggc gctattgtta ccgcggtcct
     7681 gttcactgcc ggaaaatcgc tcattagctg gtacctcgga agcagtgcag ttgcttcgag
     7741 cttcggagcc gcgggggcgc tgatcgtcct tctcctgtgg gtttattatt cggcccagat
     7801 atttttactt ggggcagagt tcactaaagt ctacgcaaac tcgcacggca gcaagcaagg
     7861 cgccccggtt tccgagcacg ccccctcccc gtcaacttga agaccggcac ggtcggccga
     7921 gcatcgcgtt gccgccaacg ttggtggccg tagtcccccc taccctatca ctttcgatga
     7981 gcgctttgcc ccgtcatcgc cgtggaaccc gactgcatgc tcatggggtt caacaggaca
     8041 acgcgccaga gtcttttccg ttctggtcgg cacagcattc ccaccgcccg ggggtgcttc
     8101 tgaagcactt cggacatcac gtgtgccgga ctcgggcgcg gttgggcaat ctacaatgct
     8161 ctccgtcttg cgtttgatca tggtccaggc caaccaaccc aatacaagta cgcccagagc
     8221 cgcgaggcta agcgcaggcg agtgcgcccc gaacgcgatt gccca
//
LOCUS       DATCWM010000522         7466 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_306140, whole genome shotgun sequence.
ACCESSION   DATCWM010000522 DATCWM010000000
VERSION     DATCWM010000522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7466)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7466)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7466
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_306140"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..206)
                     /locus_tag="VIQ50_10285"
     CDS             complement(<1..206)
                     /locus_tag="VIQ50_10285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360814.1"
                     /translation="MTEPSQDELALFAVRHFEAKQREDDWVRRLANSSDGGFGSLRFQ
                     PTQASAIDKGLRVLAYGRTPKFGNS"
     gene            complement(363..485)
                     /locus_tag="VIQ50_10290"
                     /pseudo
     CDS             complement(363..485)
                     /locus_tag="VIQ50_10290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013215994.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
     gene            complement(733..1950)
                     /locus_tag="VIQ50_10295"
     CDS             complement(733..1950)
                     /locus_tag="VIQ50_10295"
                     /EC_number="2.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008776 - acetate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006083 - acetate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006113 - fermentation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate/propionate family kinase"
                     /protein_id="HEY9360815.1"
                     /translation="MDAILVVNAGSSSVKFQIFGIGEAGALRRLVKGQIDGIGTRPRL
                     AAKAADGSALIDKAYAPGEIADVPAAIAVVASWLRQTQSLDLLAVGHRVVHGGPKYDR
                     PLVIDETVAANLEKYVSLAPLHQPNNLAPIRALLKSRPRLLQVACFDTAFHHGHSAVA
                     DHYAIPDHLYAEGVRRYGFHGLSYEYIARRLREIAPTVAAGRVIVAHLGSGASMCALA
                     NGRSVESTMGFTALDGIPMGTRPGQIDPGVLLYLLMEKGMAPNEVEDLLYRESGLKGL
                     SAISNDMRELQSNADPRAKLAVDHFVYRVGLNAGMLAAALGGLDAFVFTAGIGENSPI
                     IRARVAEKVAWLGAVFDPAANADGKSLISRPESRVVLLVVPTDEELMIAQHTLALLPK
                     DSAGKVVRERLAG"
     gene            complement(1956..2945)
                     /locus_tag="VIQ50_10300"
     CDS             complement(1956..2945)
                     /locus_tag="VIQ50_10300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018237364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HEY9360816.1"
                     /translation="MLKDSEIGNIAALGPAGDPPASKYERLIARAKQVPAARTVVVHP
                     CEETALRGPVEAAHAGIIVPILVGPAAKIGALAREHSLDISRFEIVDVPHSHAAAAKA
                     VELIQQSKGELLMKGSLHTDELMHEVASSKTGLRTERRISHIFIMDVPGYAETLFLTD
                     AAINIFPDLDAKRDIVQNAIDLFTQVGLGTPRVAILSAVETVTSKIPSTIEAAALCKM
                     ADRGQITGGILDGPLAFDNAIDPQAARIKGIKSEVAGRAQILVVPDLEAGNMLAKNLA
                     FMVKADTAGVVLGARVPIILTSRADSVRSRMASCAAAVLYADARRRTAALPKA"
     gene            complement(2939..4363)
                     /locus_tag="VIQ50_10305"
     CDS             complement(2939..4363)
                     /locus_tag="VIQ50_10305"
                     /inference="COORDINATES: protein motif:HMM:NF022783.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3141 domain-containing protein"
                     /protein_id="HEY9360817.1"
                     /translation="MGGHVNLNAEEIQFIVDQLFIGNNLAAGRIQTSDGTAIDLRNIR
                     SPIVVFCSKGDNITPPQQALGWIVDLYQNVDEIRSYGQTIVYTIHETVGHLGIFVSGG
                     VAKKEHGEFSSNIDLIDTLPPGLYEAVFELKTEDTVNADLAIGNWVMRCEERTLDDIR
                     ALGGNDAADERRFATAARVSDINLALYRTFAQPMVRALVSSPLAEWMHQLHPVELPYE
                     VFSDANPMMAPIAAMAEEVREKRRPVAADNPFVDMQETVSRQIVAGLNAWRDMTEALA
                     ERTFLAVYGSPVLQAAVGIDPAGTCPLRKASKQPLHHELLQKRIADLKSRIPVGGLRE
                     ASIRALVYVGLARGTIDERGFEALRRIRRTHGDMPLPEFKSLVREQFLILLVDTEAAL
                     AALPSMLPADADTRRKAFDLIKQVLSARGELSAEEKERLQRIAPAFGVDEASPAARNL
                     TVVRSAKASLTERFGRNARDEPSC"
     gene            complement(4411..5094)
                     /locus_tag="VIQ50_10310"
                     /pseudo
     CDS             complement(4411..5094)
                     /locus_tag="VIQ50_10310"
                     /inference="COORDINATES: protein motif:HMM:NF022783.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3141 domain-containing protein"
     gene            complement(4988..5212)
                     /locus_tag="VIQ50_10315"
     CDS             complement(4988..5212)
                     /locus_tag="VIQ50_10315"
                     /inference="COORDINATES: protein motif:HMM:NF022783.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3141 domain-containing protein"
                     /protein_id="HEY9360818.1"
                     /translation="MSSNQAPTQQPQVSFQMFGLFGPAMDYAIDAAQRSVLFWDVMRQ
                     RGNQYREHLAEAVPNVLDYEVELVLSGKDA"
     gene            complement(5461..>7466)
                     /locus_tag="VIQ50_10320"
     CDS             complement(5461..>7466)
                     /locus_tag="VIQ50_10320"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY9360819.1"
                     /translation="PLVLAIVFAAMYALGIDLQRISLGALIISLGLLVDDAMITIEST
                     VFRLERGDDKSQAATFAYASTALPRLTGTLVTIAAFVPVGFARSDAGEYTFSLFAVVA
                     IALLASWVVSGICAPVAGIALLRPPKHPHGETLSAPMRLFKRCLLGAMGAKWITILVT
                     LALFAASLWGLRFVPEQFFPSSDRSELLVDLKLQDNASVLATREAAAEFDKMLAADPD
                     VVRFSTYIRQGAIRFYLPLDVALPNDFFAQSVVVTKGLQERDQVRARLEQAVAVRLPA
                     VVARIYPLELGPPVGWPVKYRVSGPDLARVHEIALKVAEQLEAMTGIRHINFDWAEPA
                     RVMRVRIDQDQARQLGLSSQDVSLALYGVVSGSTITQVRNSIYLINVDTRAEHTQRTS
                     LESIRSLQIPLRDGKVVPLRQIASFEYTQEYPIVWRRDRIPTLTVQADVVPGLLPATA
                     VKAVQPSIDRLAATLPSGYRIVPGGSVEESAKAQASVQAVLPAMAVLVLTILMFQLQS
                     FQRVLLVLSVAPLGLIGVVAALLLGQKPMGFVAILGVLALVGMIARNSVILIDQIGTE
                     IAAGHHPWDAVVIAAIHRTRPILLTASAATLGMIPIAPTVFWGPMAFAIIGGLAVATL
                     LTLIFLPALYVAWFRISEPVPSKNVSEPAPPLSPLSEPALHTP"
BASE COUNT         1454 a         2296 c         2378 g         1338 t
ORIGIN      
        1 gaattgccga acttgggtgt cctgccatag gcgagaaccc gaaggccttt gtcgatcgcg
       61 gaggcttgcg tcggttggaa gcggaggctg ccgaagccgc catccgaaga gttcgcgagg
      121 cggcgtaccc aatcatcttc acgctgtttg gcttcaaaat gcctcacggc aaagagcgca
      181 agctcatcct ggctcggctc ggtcaagact tggctcgcat cgaggagaac ttgggatata
      241 gaccacgagg cgcgccgcaa ggcatcggcg agcggagggt tgaccgcgtg cgccgttcgc
      301 ggaagcgcaa gcaaagttaa gtactctggt aagcaagcgc gcccaattgg cccgcctaat
      361 cacgtaccgc cgagcacgcc gattaaaatg accggcattg gggtgctcag gctttttgcc
      421 gcgagtggac gcaatatatt gtcgagtaag ttcaccggca ccatgtaaag cgtaaacaga
      481 accgccgtcg gtcggatcag gattaaagac cagtagccca ccaatcccaa gcagattatg
      541 cgaatggcca acagcaagag catgtcgttt gctgcactga gcttcgaatg tttcaccgct
      601 ggggggtcct cctcaaatcg agagcaagga cgatcttgca aggcaaggta caagaaaatg
      661 ggtagcgtcg aaggcaggct cgaagcgaat gggatcggcg cggctagagg attgcctctg
      721 tacaggcacc cctcatcccg caagtctttc gcgaacgact ttgccggcgc tgtctttcgg
      781 cagcaacgcg agggtgtgct gcgcgatcat caactcctcg tccgtcggca cgacgaggag
      841 gacaacccgg ctctccggcc gcgaaataag cgatttgccg tctgcattcg ctgccgggtc
      901 gaagacggcg ccgagccatg caaccttctc cgcaacgcgg gcgcggatga tcggcgagtt
      961 ctcgccgatg ccggccgtga acacgaacgc gtccaggccg cccagcgcgg cggccaacat
     1021 cccggcgttc agcccaacgc ggtaaacaaa atgatcgacg gcgagcttgg cgcgaggatc
     1081 ggcattcgat tgcagctccc gcatgtcatt actgatggcg gacaggcctt tgaggccgct
     1141 ttcgcgatag agcagatcct cgacctcgtt cggggccatg cctttttcca tgagcaggta
     1201 aaggagaact cccgggtcga tttggcccgg ccgcgtgccc atgggtattc cgtcgagcgc
     1261 ggtaaagccc atggtgcttt cgacgctgcg gccgttggcc agagcgcaca tggacgcgcc
     1321 gctgccgaga tgcgcgacga tcacgcggcc cgctgccaca gtcggggcga tctcgcgcaa
     1381 gcgccgggcg atgtattcgt aggacagccc atggaacccg tagcgtctga ctccctccgc
     1441 gtacaaatgg tcgggaatcg cgtaatggtc cgcgacggcg ctgtggccgt gatggaacgc
     1501 ggtgtcgaag caggcaacct gaagcagacg aggtcgactc tttagtaggg cccggatcgg
     1561 cgcgaggttg ttgggctgat gcagcggtgc gagcgaaacg tatttctcta ggttagccgc
     1621 caccgtttca tcgatgacca aaggccggtc gtatttcggc ccgccatgga cgacccggtg
     1681 accaacggcg agaagatcca agctctgcgt ctggcgaagc caggacgcca ccacggcgat
     1741 cgcggccgga acgtcggcga tttcgcccgg cgcataggct ttgtcgatca gcgcggatcc
     1801 atcggcggct ttggcagcca gccgcggccg cgtaccgatg ccatcgatct gacctttgac
     1861 caggcgccgc agcgcgccgg cttctccaat gccgaatatc tgaaacttga cgcttgaaga
     1921 acccgcattg acgacgagta ttgcatccat atcgatcagg ccttcggcag cgccgcagtc
     1981 cgtcggcgtg cgtcggcgta gaggacggcc gccgcgcagg aggccatgcg cgaacgcacg
     2041 gaatccgcgc gcgaggtcag gatgatgggc actcgcgcgc caagaacgac gcccgccgta
     2101 tccgccttga ccatgaacgc gagatttttt gccagcatat tgccggcctc gagatccggc
     2161 accaccagga tctgcgcgcg cccggcaacc tcggacttga tgcccttgat ccgcgcggcc
     2221 tggggatcga tggcattgtc gaaggccaga ggtccatcga ggatgccgcc cgttatttgt
     2281 ccccggtcgg ccatcttgca aagcgcggcc gcctcgatgg tcgagggtat cttggaggtt
     2341 acggtttcga cagcggacag gatcgcgacc cgcggcgtgc ctaggcctac ctgcgtgaac
     2401 agatcgatcg cgttctgcac gatgtcgcgt ttggcatcta ggtcgggaaa aatgttgatg
     2461 gctgcgtcgg taaggaaaag cgtctcggca tagcccggca cgtccatgat gaagatatgg
     2521 ctgatgcgcc gttccgtgcg caggccggtc ttgctagatg ccacctcgtg catgagctcg
     2581 tccgtgtgga ggctgccctt catcaagagc tcgcctttcg attgctggat gagttccacc
     2641 gcctttgccg ctgccgcatg gctatgcggc acgtcgacga tctcgaagcg actgatgtcg
     2701 agactgtgct cgcgggcgag ggcgccaatc ttggcggcag gtccgacaag gattggaacg
     2761 atgatgccgg cgtgcgccgc ttcgacggga ccgcgcagcg ccgtctcttc gcaggggtga
     2821 acgacgacgg tcctcgcggc cggcacctgc ttggccctgg cgatcagccg ctcgtacttc
     2881 gaagcgggtg ggtcgccggc cgggccgagc gccgcgatgt tgccgatctc actgtccttc
     2941 aacatgacgg ttcgtctcgt gcattccggc cgaaccgctc ggtcagggaa gcttttgccg
     3001 accggacaac cgtcaggttt cgggccgccg gcgatgcctc gtcgacgccg aaggcggggg
     3061 cgattcgctg caggcgctcc ttctcttcgg cagacaactc accccgcgca ctcaaaacct
     3121 gtttgatcag atcgaacgcc ttgcgccgcg tgtcggcgtc ggcggggagc atggacggaa
     3181 gcgcggcgag cgcagcttcc gtatcgacca gcagaatcaa gaattgctcg cgcacgagcg
     3241 acttgaattc cggcaagggc atgtcgccgt gcgtgcgccg aatgcggcgc agagcttcaa
     3301 agccgcgctc atcgatcgta ccccttgcga gccccacata gacgagggcg cggatgcttg
     3361 cttcgcgcag tcccccgacc ggaatgcgcg atttcaggtc ggcaatccgc ttctgcagca
     3421 gctcgtgatg caacggctgc ttgctcgcct tccgcaaggg gcacgtcccc gcaggatcga
     3481 tgccgacagc cgcctgcagc accggcgaac catagactgc caggaacgtg cgctcagcca
     3541 gcgcctcggt catgtctcgc catgcgttga gtccggcgac aatctggcga gagacggtct
     3601 cttgcatgtc gacaaatgga ttatcggcgg cgaccggcct gcgcttctcg cgaacctcct
     3661 cagccatggc ggcgatcgga gccatcatgg ggttcgcatc ggagaagacc tcgtacggca
     3721 attccaccgg atgcagttgg tgcatccact ctgccagcgg cgaactcacg agtgcgcgaa
     3781 ccatcggctg cgcgaacgtg cggtaaagcg caaggttgat gtccgatacg cgagcggcag
     3841 tcgcgaaacg gcgctcatcc gcggcatcat tgccgccgag cgcgcggatg tcgtccaagg
     3901 tcctttcttc gcaccgcatc acccagtttc cgatcgccag atcggcgttg accgtgtcct
     3961 cggtcttgag ctcgaacacc gcctcgtaga ggccgggcgg caacgtgtcg atcaggtcga
     4021 tattgctgga aaactcgccg tgctcttttt ttgcaacgcc gccggaaacg aagatgccga
     4081 gatggccgac ggtctcgtgg atcgtataga cgatggtttg cccataggag cggatttcat
     4141 cgacgttctg gtagagatcg acaatccagc cgagcgcctg ctgcggcggc gtgatgttgt
     4201 ccccttttga gcagaacacg acgatcggag atcggatatt gcggaggtcg atcgcggttc
     4261 cgtccgatgt ttgtattctg ccggccgcga gattgttgcc gatgaacagc tggtcgacga
     4321 tgaactggat ctcctcggca ttgagattga cgtgcccccc caccagcgct cgaaacccag
     4381 ataacgcggt gcctcggtgt cgatcttgga atagaggctg tactgcttgc tccaaagcgt
     4441 gttggcaggg ttctggttct cgaaattctc caccagccaa gccccgtcga atttcccgtt
     4501 gccgaggtcg ctggtgaagg cggtcaacca gctgccaccc aggaggccgc cgctgtagcg
     4561 catcggattc ttgccgtgca cgccggccca gtacgagagc ggcgctccgg cgatgatgat
     4621 cgggccgaac aattcgggac gaatggcggc gagcatcatg atcgcccagc cggcctggca
     4681 attgccaatc acgcacggct tgccgtcggc ctcgggatgc agggcggcga ctttctcgag
     4741 aaaaaccgcc tcggcgcgtg cgatgtcctc gatcgtttgg ccggggacgg gatcggggag
     4801 gaagccgatg aaatagcagg ggtgaccggc tttgaatgca acgccgattt cgctgtcggc
     4861 cttgaatccc ccaatcccag ggccgtgccc ggcgcgcggg tcgacgacga cgaacggcct
     4921 tcgcgtcgag tcgatctcgg tgcccggcgg cggaacgacg ctcacgagcc cgtagttgac
     4981 gggtcgatca agcgtctttg ccgctgagga ccaactccac ttcgtagtcg agcacatttg
     5041 gcacggcctc ggccaagtgt tcgcgatact gattgccgcg ctggcgcatg acatcccaga
     5101 acagcacgct gcgctgcgcg gcatcgatcg cgtaatccat tgccgggccg aataagccga
     5161 acatctggaa tgacacctgc ggctgctggg taggcgcttg attgctgctc attgagacct
     5221 ccgcttccgt tcagccccag ctcagagtca tggcgacgtc acccggcaga ccgccgggaa
     5281 aatcgaaatg cgtcggggtt actcatcatg ctttcctacg tgcgtcagca ggagcgcgca
     5341 actttattgc caaattcgcg cgcggcaatc ttaattcctg caaagtgcgc cggagcagaa
     5401 ggcggaggaa aataccgcct ggaggcaaca cggatatgac gccggatccg gtcaaagcac
     5461 tcatggcgta tgcaacgctg gttcggacaa cggagataac gggggagctg gttcggacac
     5521 attttttgag gggacaggtt ccgaaatcct gaaccaagcc acatacaagg ctggcaggaa
     5581 aatcagagtc agcagggttg ccacggcgag cccgccgata atcgcaaacg ccatggggcc
     5641 ccagaatacg gtcggcgcga tcgggatcat cccgagcgtc gctgccgagg cggtgagcag
     5701 gatggggcgg gtccggtgga tcgcggcgat cacgacggcg tcccacggat ggtgcccggc
     5761 tgcaatctcg gtcccgattt ggtcgattag aatgaccgaa ttgcgcgcga tcatgccgac
     5821 gagcgccagc acgccgagta tcgcaacgaa acccatcggc ttctgcccaa gcagcagtgc
     5881 cgcaaccacg ccgatgagcc cgagcggcgc cacgctcagc accagcaaca cgcgttggaa
     5941 gctctgcaat tggaacatca ggatggtcaa gacgagcacc gccattgccg gcaaaactgc
     6001 ctgcacggac gcctgggcct tggcactctc ctcgaccgat ccacccggaa cgatccggta
     6061 gccgctgggc agtgtcgccg cgagccggtc aatgctgggc tgcacggcct tcacagccgt
     6121 cgccggcagc aggccaggca ccacgtcggc ctgcactgtc agggtcggga tccgatcccg
     6181 ccgccagacg atcggatatt cctgggtgta ttcgaagctg gcgatctggc gcaatggcac
     6241 gaccttcccg tcgcgtaggg ggatttgcag cgagcggatg gattcaagtg aggtccgctg
     6301 cgtgtgctct gcgcgcgtat cgacgttgat caggtatatg ctattgcgca cctgggtgat
     6361 cgtgctgccg gatacaacac catagagagc cagcgacacg tcctgggagc tgagccccag
     6421 ctggcgcgcc tggtcctggt cgatccgtac gcgcatgacg cgcgccggct ccgcccagtc
     6481 gaagttgatg tggcgtatcc ccgtcatcgc ctccagctgc tcggcaacct tcagcgcgat
     6541 ctcatgcacg cgcgcgaggt ccggtccgct gacgcggtat ttgaccggcc agccgacggg
     6601 aggccctagc tcgagcggat agatgcgtgc gaccaccgcg gggagccgca ctgcgactgc
     6661 ctgctccaga cgcgcgcgca cctggtcacg ctcctgcaga cccttggtga ccaccaccga
     6721 ctgcgcgaaa aagtcgttgg gcagcgcgac gtcgagcggc aaatagaagc gaatggcgcc
     6781 ctgcctgata taggtcgaga agcgcacgac atcggggtcg gcggcgagca tcttgtcgaa
     6841 ctccgctgca gcctcacgcg tggccagcac ggaggcattg tcctgcagct tcaggtccac
     6901 caggagctcc gaacggtcgg aggacgggaa gaactgctca gggacgaagc ggagccccca
     6961 tagcgatgcc gcgaacaagg cgagcgtcac cagaatggtt atccacttcg cccccatcgc
     7021 gcccagcaga cagcgtttga atagccgcat cggcgcgctc agtgtctcgc catgtggatg
     7081 cttcggcggc cgcagcagcg caatcccggc gacgggtgcg cagatgcccg agaccaccca
     7141 ggaggccagc agcgcgatgg ccacgaccgc gaaaagcgaa aacgtgtact cgccggcgtc
     7201 gctgcgcgcg aagccgaccg gcacgaatgc ggcaatagtg acgagtgtgc cggtaaggcg
     7261 cggtagggca gtggacgcat aggcgaatgt ggccgcctgg gatttgtcgt ccccgcgctc
     7321 cagccggaac acagtgctct cgatggtgat catggcgtcg tccaccagca ggccgagaga
     7381 tatgatgaga gccccgagcg agatgcgctg aaggtcgatc cccaacgcgt acatggccgc
     7441 gaacacgatc gcgagcacca gcggaa
//
LOCUS       DATCWM010000523         2086 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_46918, whole genome shotgun sequence.
ACCESSION   DATCWM010000523 DATCWM010000000
VERSION     DATCWM010000523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2086
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46918"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(69..827)
                     /locus_tag="VIQ50_10325"
     CDS             complement(69..827)
                     /locus_tag="VIQ50_10325"
                     /inference="COORDINATES: protein motif:HMM:NF011405.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HEY9360820.1"
                     /translation="MSKSAPLHTAEIGDFAVPRHVAIIMDGNGRWAAARGLPRGEGHR
                     RGVEALRRTVRAAGDLGIAFLTIFSFSAENWSRPPAEIRELMVLLRRFIRRDLADLHR
                     RGVRVRVIGEREDLDSDIRRLLDEAEELTKHNSRLVLVVAFNYGARQEIARAARRMAA
                     EVAAGDLALNAVTADKLASYLDAPDVPDPDLIIRTSGEQRLSNFLLWQAAYSELVFVP
                     AYWPDFDRAALEDAIIEYRRRERRFGGLVAKTGS"
     gene            complement(839..1402)
                     /gene="frr"
                     /locus_tag="VIQ50_10330"
     CDS             complement(839..1402)
                     /gene="frr"
                     /locus_tag="VIQ50_10330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016844334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HEY9360821.1"
                     /translation="MANPTHDINELKRRMQGAIQLLKQELGGLRTGRASASLLEPVQV
                     EAYGTHMPLNQVATVSVPEPRLISVQVWDKSMIHAVEKAIAASNLGLSPSTEGQVLRL
                     RIPELNEERRRELVKVAHKYAEAARVAVRHVRRDGLDVLKRLEKDHKISEDDGKRSSE
                     QVQKTTDDAIAEVDRMLANKEKEILTV"
     gene            complement(1458..>2086)
                     /gene="pyrH"
                     /locus_tag="VIQ50_10335"
     CDS             complement(1458..>2086)
                     /gene="pyrH"
                     /locus_tag="VIQ50_10335"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033862 - UMP kinase activity [Evidence
                     IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HEY9360822.1"
                     /translation="LERIAADLLAARALGVAIAVVVGGGNIFRGVHVSAKGTPRATGD
                     LMGMLATVMNALALESAMEGAGLPASTMSALSMPQICETYERRRALRHMEQGRMVVLA
                     GGTGNPFFTTDTTAVLRAAELGAEAVLKATNVDGVYSADPKQNSGAKRYDRLTHQEAL
                     ERNLKVMDTAAFALARENRMPIIVFSIREKGAIAAVLRGEGRFTVVGN"
BASE COUNT          349 a          718 c          636 g          383 t
ORIGIN      
        1 acccgcaacg ccagctcgct gccgcgaagg gtgccggcgc gcgatgggtg gtccgcccct
       61 accacgaatt aggatccggt cttagcgacg agaccgccga agcgccgttc gcgccggcga
      121 tactcgatga tcgcatcctc gagtgccgcg cggtcgaaat ccggccaata ggccggcaca
      181 aacacgagct cgctataggc cgcttgccac agcaggaaat tggagagcct ttgctcgccg
      241 ctggtgcgga tgatgagatc gggatccggc acgtcgggcg cgtcgagata gctggccagc
      301 ttgtcggccg tcaccgcatt gagcgccaaa tcccccgccg cgacctccgc cgccatgcgg
      361 cgggccgcgc gcgcaatctc ctgccgggct ccgtaattga aggcgacgac caaaaccagc
      421 cggctgttgt gcttggtcaa ctcctcggct tcgtcgagca gtcgccggat gtcggaatcg
      481 agatcctctc gttcgccgat cacgcgcacg cgcacgccgc gacgatgcag atcggcgaga
      541 tcgcggcgaa tgaagcgacg caacaatacc atcagctcgc gaatttctgc gggcgggcgc
      601 gaccagttct cggcgctgaa ggaaaaaatg gtaagaaatg ctattccgag atcgccggcg
      661 gcacgcacag tgcggcgcag cgcctcgacc ccgcgtcgat gtccctcccc gcgcggcagc
      721 ccgcgcgccg ccgcccagcg tccattgccg tccatgatga tggcaacgtg ccgcggtacg
      781 gcgaaatcgc cgatctcggc agtatgcagc ggcgcgctct tcgacatccg cttgaacatc
      841 acaccgtgag gatttccttt tccttattcg ccaacatccg atcgacctcg gcgatggcat
      901 cgtctgtcgt tttctgcacc tgttcggacg agcgcttacc gtcgtcttca ctgatcttgt
      961 ggtccttttc gagcctcttg agcacgtcaa ggccgtcgcg ccggacgtgc cgcacggcaa
     1021 ctcgcgccgc ctcggcgtat ttatgcgcaa ccttgaccag ctccctgcgc cgctcctcgt
     1081 tgagttcagg gatacgcagt cgcagcacct ggccttcggt cgagggacta agcccgaggt
     1141 tggaggcggc gatggccttc tccaccgcat gaatcatcga tttgtcccac acctgcacgg
     1201 aaatgagcct gggctcgggc acgctcacgg tagcgacctg attgaggggc atgtgagtgc
     1261 cataggcctc gacctgtacc ggttcgagca ggctcgccga ggcacggccg gtgcgcagcc
     1321 cgcccagctc ctgcttgagc aactggattg caccttgcat gcggcgcttg agctcgttga
     1381 tgtcgtgcgt cgggtttgcc atggcgtccc tcgaacaatt ggtcgatccg ccgcgttgcg
     1441 cgggcgccgg caccgggtca attgccgacg acggtgaagc gcccttcccc gcgcagcacc
     1501 gcagcgattg ctcctttttc gcggatcgag aacacgatga taggcatacg gttctcccga
     1561 gcaagcgcga aggcggccgt atccatcact ttcaggttgc gctcgagcgc ctcctggtgc
     1621 gtcaagcgat cgtagcgctt ggccccgctg ttctgcttcg gatcggcgct atagacgccg
     1681 tcgacattgg tggccttgag cacggcctcc gcgccgagct ccgccgcccg cagcacggcg
     1741 gtggtatcgg tcgtgaagaa cggattgccg gttcctcccg ccaacaccac catcctcccc
     1801 tgctccatgt ggcgcaatgc tcggcgccgc tcgtacgtct cgcaaatctg cggcatgctc
     1861 agcgccgaca tggtgctcgc cggcaatccc gccccttcca tagcgctctc gagcgcgagc
     1921 gcgttcatga ccgtcgcgag cattcccatc aggtcgccgg tggcacgggg ggttcctttg
     1981 gccgacacgt gcacgccgcg aaagatattg cccccgccga ccaccaccgc gatcgccacg
     2041 ccgagcgccc gcgcggccag aagatcggcc gcgatgcgct cgagcg
//
LOCUS       DATCWM010000524         3394 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_14419, whole genome shotgun sequence.
ACCESSION   DATCWM010000524 DATCWM010000000
VERSION     DATCWM010000524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3394)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3394)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3394
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14419"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(69..1568)
                     /locus_tag="VIQ50_10340"
     CDS             complement(69..1568)
                     /locus_tag="VIQ50_10340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018386975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEY9360823.1"
                     /translation="MDFISNLGLGLAVALTLQNAAYCFIGVLLGTVIGVLPGIGPVTT
                     VAMLLPISFTLQPEAALIMLAGIYYGAQYGGSTTAILVNIPGEASSVVTTIDGHQMAR
                     QGRAGPALGIAALGSFFAGCVSTLLIALAAPPLASIALQFGPAEYFSLMVCGLIAAVV
                     LARGSLLKAVAMVVLGLLLGLVGTDVNSGARRFNFGMTGLADGIEFVAISMAIYGIAE
                     VVYNLEKQQTTSVVADAVGRVWPSLTDLKQCAGSILRGTALGAILGVLPGGGALLASF
                     AAYTLEKKVASAPRQFGNGDIRGVAAPESANNAGAQTSFIPMLTLGIPGNPTMAMMIG
                     ALMIHGIAPGPRVMTDRPGLFWGLIASMWLGNLMLVVLNLPMVGVWVRLLRVPYRLLY
                     PAIIAFCCIGAYTINNKPFDAFVMAFFAVFGYVALKLDCEPAPLILGFVLGPMMEENL
                     RRALLISRGDPMVFLQEPISLAFLLVAAGLLVVIAAPAIRVGREEALKE"
     gene            complement(1573..2019)
                     /locus_tag="VIQ50_10345"
     CDS             complement(1573..2019)
                     /locus_tag="VIQ50_10345"
                     /inference="COORDINATES: protein motif:HMM:NF018979.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HEY9360824.1"
                     /translation="MKIRAPKDFWSGVMFCSFAAVAIFAARGYSLGSAGRMGPGYFPL
                     LLAGLLAALGAALIARSVVVSGEPLSRFHVLHLVLIAAAVCLFGVLIEPLGLVISLAV
                     LTLMAALSGGQFRLMETLTLAAVLIVFSVGVFVYALGLPLNAWPSL"
     gene            2291..>3394
                     /locus_tag="VIQ50_10350"
     CDS             2291..>3394
                     /locus_tag="VIQ50_10350"
                     /inference="COORDINATES: protein motif:HMM:NF012348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase"
                     /protein_id="HEY9360825.1"
                     /translation="MKRPLAFIARHGLWTDEQRRQAEDLKRRVKQEDLHLVRLVWADP
                     HGAARAKAVTVPVFLSALEIGYNINVATTTLDSANARTFASFTRGGGMGLDEMTGSPN
                     LTIVPDPSTFRVLPWAPGVGWVLCDEYFNSGVPFHFSPRHLLRQQLQRLANKGMRLLV
                     GLEIEWYLLRVAQDALGDDNIGFPGVRGQPIKTVPAEPGFSYHSESNMDLMQPVLSAL
                     ADHLAKIGLPLRSIENEWGPGQLECTFAARPALEAADHALLFRTAARQICRRMGYFAT
                     FMCRPALKGYYSSGWHLHQSLLDGRSERNLFMPEREPDRLSPLGRAFLGGLIRHAAPA
                     TAFATPTINGYRRFRPNSLAPDRAAWCYDHRGVM"
BASE COUNT          684 a         1107 c         1062 g          541 t
ORIGIN      
        1 ccggctttgc gctgattgga aaggtgatct ggagctggat cgccggtttg ttccgacggc
       61 cgtagcggct actccttgag cgcctcttcc cggcccacgc ggatcgctgg cgcggcaatt
      121 accaccagaa ggccggccgc cacgaggagg aatgcgaggc tgatcggctc ctgcaggaac
      181 accatcggat cgccgcgcga gatcagaagc gcccgacgaa gattttcctc catcatcggc
      241 cccagcacaa aaccgagaat gagcggcgcc ggctcgcaat cgagcttgag agcgacgtag
      301 ccgaagaccg cgaagaacgc catcacgaag gcgtcgaacg gcttgttgtt gatcgtatag
      361 gcgccgatgc agcagaacgc gatgatggct ggatagagca gccggtaagg cacgcgcagc
      421 aatcgcaccc aaacgccgac catcggcaaa ttcaacacca ctagcatcag attgccgagc
      481 cacatgctgg cgatcaggcc ccagaacaat cccggccgat ccgtcatcac gcgcgggccc
      541 ggcgcgatgc cgtggatcat cagcgccccg atcatcatcg ccatggtcgg attgccggga
      601 atgcccaagg tcagcatcgg gatgaacgac gtctgcgcgc ccgcgttgtt ggcggattcc
      661 ggggccgcca cgccccggat gtcgccgttg ccgaattggc gcggggcgct cgcgaccttt
      721 ttctcgagcg tataggcggc gaaggaagcg agcagcgcgc cgcctccggg caggacgccg
      781 agaattgcgc ccagcgcggt gccacgcagg atcgagccgg cgcattgctt gagatcggtg
      841 aggctcggcc acactcggcc caccgcgtcg gcaacgacgc tcgtcgtttg ctgcttttcg
      901 agattgtaga cgacctcggc gataccatag atcgccatcg agatcgcgac gaactcgatg
      961 ccgtcggcga gcccggtcat gccgaaattg aagcgtcgtg cgcccgaatt cacgtcggtg
     1021 ccgacgaggc cgagcagcag gccgagcacg accatcgcga ccgccttcag cagcgatccg
     1081 cgcgccagaa cgacggctgc gatcaagccg cagaccatca gcgagaagta ttccgccggg
     1141 ccgaattgca gcgcgatgct cgcaagcggc ggcgccgcga gcgcaatcag cagcgtcgag
     1201 acgcaaccgg cgaagaagga accgagcgcg gcaatgccta gcgccggtcc ggcgcgacct
     1261 tgacgcgcca tttggtggcc gtcgatggtg gtgacgaccg acgacgcctc gccgggaatg
     1321 ttgaccagga tggccgtggt cgagccgccg tactgggccc catagtagat gccggcgagc
     1381 atgatgagcg ccgcctccgg ctgcagcgtg aacgagatcg gcagcaacat ggcaaccgtg
     1441 gtgaccggac ctatcccggg cagtacgccg atgacggtgc cgagcaggac accgatgaag
     1501 caataggcgg cgttctggag tgtcagcgcg acggcaagtc ccagcccgag attcgagatg
     1561 aagtccatcg ccctacaggc tcggccaggc gttgagcgga agacccagtg cataaacaaa
     1621 aacgccaacg gaaaagacga tgagcacggc ggccaacgtg agcgtctcca tcagacgaaa
     1681 ctgcccgccg gatagagccg ccatcagcgt caatacggcg agcgagatca cgagccccaa
     1741 cggttcgatc aagaccccga acaggcagac cgccgccgcg atcagcacca ggtgcagaac
     1801 gtgaaagcgc gagagcggct caccgctgac gacgaccgag cgggcaatca acgctgcgcc
     1861 aagcgccgca agcaggcctg caagcagcag cgggaaatat cccggtccca tcctgccggc
     1921 gctgcccagg gaatagccgc gcgccgcgaa gatcgcgacc gcggcgaagc tgcagaacat
     1981 cacgcccgac cagaaatcct tcggcgcacg aattttcatg tctgttagtc agcccggttg
     2041 cgccgccacg ggagatcaag tcggcgagtg tcgtggagtt gaagcttccc caagctcgta
     2101 taggacgttc aaatccaaaa ccacactagc accataaatt tgcttgtgtc ccttgttggg
     2161 aagttcgcgt cgcagggtgc cgcaaacggc atgcgaactt caggatcgga cgacaagtgc
     2221 ttcttgcgtc attagcggcg tcatctacat tgcaatcctc ccgcggacgc gtgcgcacgg
     2281 aatggtgcag gtgaaaagac ccctcgcatt catcgccaga cacggtctgt ggaccgacga
     2341 gcagcggcgc caagccgagg atctcaagcg gagggtcaag caggaggatc tccatctcgt
     2401 acgcctggtc tgggcggacc cgcacggcgc cgcgcgcgcc aaggcggtga ccgtgccggt
     2461 tttcctcagc gcgctcgaga tcggctacaa catcaacgtc gcgaccacta cgctcgactc
     2521 cgccaatgcc cgcaccttcg cctcgttcac ccgcggcggc gggatgggcc tcgacgaaat
     2581 gacgggctcg cccaatctca ccatagttcc cgatccttcc acctttcgcg tgctgccctg
     2641 ggcgcccggc gtcggctggg tgttgtgcga cgaatatttc aacagcggcg tgccgttcca
     2701 tttctcgccg cgccatctgc tgcgccagca gcttcagcgg ctcgccaata agggcatgcg
     2761 cctgctcgtc gggctggaaa tcgagtggta tctgctgcgc gtcgcgcagg acgcgctcgg
     2821 cgacgacaat atcggctttc ccggcgtgcg cgggcagccg atcaaaacgg tcccagccga
     2881 accgggcttt tcctatcaca gcgaatcaaa catggatttg atgcagccgg tgctctccgc
     2941 gctggccgat catttggcaa agatcggact gccgctgcgg tcgatcgaga acgagtgggg
     3001 accggggcaa ctcgagtgta cctttgccgc gcggccggcg ctcgaagccg ccgaccatgc
     3061 gctgctgttc cgtacggcag cgcgacaaat ttgccgccga atgggatatt tcgccacgtt
     3121 catgtgccgg ccggcgctca agggctatta ctccagcggc tggcacctgc atcagtcgct
     3181 tctcgacggc aggagcgaac gcaacttgtt catgccggag cgcgagcccg accgtttgtc
     3241 gccgctcggc cgcgcgtttc tcggcggttt gatcagacat gccgcccccg cgaccgcctt
     3301 tgccacgccg acgatcaacg gctaccggcg atttcggccg aactcgcttg cgcccgaccg
     3361 cgccgcatgg tgctacgacc accgcggcgt catg
//
LOCUS       DATCWM010000525         2297 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_52567, whole genome shotgun sequence.
ACCESSION   DATCWM010000525 DATCWM010000000
VERSION     DATCWM010000525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2297
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52567"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1175
                     /locus_tag="VIQ50_10355"
     CDS             <1..1175
                     /locus_tag="VIQ50_10355"
                     /inference="COORDINATES: protein motif:HMM:NF014062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nodulation protein NfeD"
                     /protein_id="HEY9360826.1"
                     /translation="MNTPGGLDTSMREIIRAILSSPVPVVTYVAPSGARAASAGTYIA
                     YASAIAAMAPGTNLGAATPIHLGGTPSLPGGTQPAAQKDKEKRGEGSSNSSEPADAES
                     RKAVNDAVAYIRGLAELNGRNADWAAEAVRSAVSLPASEALKLHVIDVIADNVPDLLR
                     KIDGRSVNVGGKSEPLATADLEIVSARPDWRTELLAVITDPNVAFILMLIGVYGLIFE
                     FLNPGAVAPGLVGSISLLVALYALNLMPINYAGAALVLLGIGLMVAEAHIGSFGVIGI
                     GGIVAFVIGAIMMFPSGAPGFALSLSVVAAATLITAALFLLVLTMLLRSRRRPVVTGK
                     EGLLGAEGETVVWDGAEGRVRVQGEIWRARAQQPLQAGERIRVVEREGLVLVVEPA"
     gene            1204..1968
                     /locus_tag="VIQ50_10360"
     CDS             1204..1968
                     /locus_tag="VIQ50_10360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="slipin family protein"
                     /protein_id="HEY9360827.1"
                     /translation="MLSLATVAVLAIFVVIILFSAVRILREYERGVVFTLGRYTGTKG
                     PGFFLLVPLVQQMVRIDLRVVVDEVPTQDVISRDNVSVKVNAVIYFRVVDAERAVIQV
                     YNYLAATSQLAQTTLRWVLGKHDLDQMLAERDKLNADIQDVLDKQTEAWGIKVSTVEI
                     KRIDLDESMIRAIARQAEAERTRRAKIINAEGEQQAAQKLVEAAQILAPVPQAMQLRY
                     LATLFDIAGERSSTIVFPFPIDLMQAWAAHGSPERG"
     gene            2068..>2297
                     /locus_tag="VIQ50_10365"
     CDS             2068..>2297
                     /locus_tag="VIQ50_10365"
                     /inference="COORDINATES: protein motif:HMM:NF018630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1289 domain-containing protein"
                     /protein_id="HEY9360828.1"
                     /translation="MNIRPSGDIRPAQASDRHSPCVGVCTLDPAMGWCLGCGRTGDEI
                     ARWIGLDDAQRLAIWNELPARLDRLAVRARLLP"
BASE COUNT          397 a          738 c          757 g          405 t
ORIGIN      
        1 gcatgaacac gccgggcggg ctcgacacct ccatgcgcga gatcattcgc gccatcctct
       61 cctcgccggt gcctgtcgtc acctacgtgg ccccgagcgg cgcacgcgcg gcgagcgccg
      121 gtacctacat cgcctatgcg agcgccatcg ccgccatggc tccgggcacc aatctcggcg
      181 ctgccacccc gattcacttg ggcggaaccc caagccttcc cggcgggact cagcccgctg
      241 cccagaagga taaagagaag cgcggggagg ggagtagcaa ttccagcgag ccggcggatg
      301 cggagagccg caaggccgtc aacgacgcgg tcgcctatat ccgcggcctc gctgagctca
      361 acggccgcaa cgccgattgg gcggccgaag cggtacgctc ggcggtaagc cttccggcat
      421 ccgaggcgct caagcttcac gtcatcgacg tgatcgcgga caacgtgccg gatctgcttc
      481 gcaagatcga tggccgcagc gtcaacgtcg gcggcaagtc cgaacccctg gcaaccgcgg
      541 atctcgagat cgtgagcgca aggccggatt ggcggaccga gctgctcgcc gtcatcaccg
      601 atcccaacgt cgctttcatt ctgatgctca tcggggtgta cggattgatc ttcgagtttc
      661 tcaatccggg agcggtggct ccgggactgg tcgggagcat cagccttttg gtcgcgctat
      721 acgcgctcaa cctgatgccc atcaactatg caggcgcagc cctcgttctg ctcggcatcg
      781 gtctcatggt tgccgaggcg cacatcggct ccttcggcgt gatcggcatc ggcggcatcg
      841 tcgccttcgt gatcggcgcg atcatgatgt ttccatccgg cgcgcccggc tttgcgctct
      901 cgctgtcggt ggtcgcagcc gccacgctca tcaccgccgc gctgttcctg ctggtcctca
      961 cgatgctctt gcgctcgcgg cgccggcctg tcgtcacagg gaaggagggg ctgctcggcg
     1021 ccgagggcga gaccgtggtg tgggacggag cggagggacg cgtgcgggtg cagggcgaga
     1081 tctggcgcgc gcgcgcgcag cagccattgc aagccggcga gcggatcaga gtggtcgaac
     1141 gcgaaggtct cgttctcgtc gttgagccgg cctgacgagc cctcgacaac aaggaggaaa
     1201 gttatgctgt ccctcgccac cgtcgccgtt ttggcgatct tcgtcgtgat catcttgttc
     1261 tcggcggtgc gcatcctgcg cgaatacgag cgcggcgtcg tgttcacgct cgggcgctac
     1321 accggcacga aggggccggg gttcttcctc ctcgtgccgc tggtgcagca gatggtgcgg
     1381 atcgatcttc gcgtggtcgt ggacgaggtg cccacccagg acgtgatttc ccgcgacaac
     1441 gtgtcggtca aggtgaacgc cgtcatttat ttccgcgtcg tcgacgccga acgggcggtg
     1501 attcaggtct acaactatct tgccgccacg agtcagcttg cgcagacgac cttgcgctgg
     1561 gtgctcggca aacacgacct cgaccagatg ctggccgagc gcgacaagct caacgccgac
     1621 atccaggatg tgctcgacaa gcagaccgag gcgtggggga tcaaggtgtc cacggtcgag
     1681 atcaagcgca tcgacctcga cgagagcatg atccgggcga tcgcccgcca agccgaggcc
     1741 gaacgcacgc gtcgcgccaa gatcatcaac gcggagggcg agcagcaggc cgcgcaaaag
     1801 ctcgtcgagg cggcgcagat cctggcgccg gtgccacagg cgatgcagct gcgttatctc
     1861 gccacgctgt tcgacatcgc gggtgagcgc agctcgacca tcgtatttcc gttcccgatc
     1921 gacctgatgc aggcatgggc ggcgcacgga tcgcccgaac gaggctgatg gtcgcgattg
     1981 ccagtagcgc ccgtggcaaa catgatgctt cgcgtgctcg accaattcgg ctatgacgga
     2041 cagtccgcat aatcgagcga gcgccacatg aatatccgac cgagcggaga catcagacct
     2101 gcgcaggcat ccgaccgaca ctcaccatgt gtcggggtgt gcacgctcga tccagccatg
     2161 ggatggtgtt tgggttgcgg acgcacgggc gatgagatcg cgcgctggat cgggttggac
     2221 gacgctcagc ggctcgccat ttggaacgag ctcccggcga ggctcgaccg attggcagtc
     2281 agggcgaggc tcttgcc
//
LOCUS       DATCWM010000526         8491 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_155052, whole genome shotgun sequence.
ACCESSION   DATCWM010000526 DATCWM010000000
VERSION     DATCWM010000526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8491)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8491)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8491
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155052"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(484..1500)
                     /locus_tag="VIQ50_10370"
     CDS             complement(484..1500)
                     /locus_tag="VIQ50_10370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HEY9360829.1"
                     /translation="MDALPEFALVRAATLEEVIGARARHPDSRLLGGGTDLVVNIRRG
                     IIAPPVLIDINRVAELRAIRADARSLEIGAAVNIAEVAAHQEVMRHYPVVAQAAEFIA
                     GPTHRNMGTVGGNLCLDTRCLFYNQSEWWRAANHHCLKTTGEVCHVAPKSRGVCFATF
                     SGDLAPALLALNAEVDLAGPAGRRTIALENLYIGYARQDRPITENEGDGKYYLSLRPG
                     EFVTAVRASNTVGLRSAYDKVRIRRSIEYPVTGVAVALRREGDVLADLRVAFTGTNPR
                     PVMLEGTAELCGGPLEARVFNGLDALVRDQIMSMKTTFTPGHYRRRVAGVLARRLIAR
                     LFAG"
     gene            complement(1500..3839)
                     /gene="hcrA"
                     /locus_tag="VIQ50_10375"
     CDS             complement(1500..3839)
                     /gene="hcrA"
                     /locus_tag="VIQ50_10375"
                     /EC_number="1.1.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoyl-CoA reductase subunit alpha"
                     /protein_id="HEY9360830.1"
                     /translation="MNEIAAAHSIGAHVPLIDGPDKVSGRAKYTADFVAPGLLAGRIF
                     RSPYSHAEILEVDVSAALRLPGVKAIVTGADCDKTFGVLPIARSEHPLAREKVRYRGE
                     PVAAVAAIDDATAKHALDLIKLKVRELPAYYSSKQAMAAGASAIHAHRPNNVERDVLF
                     ELGSVAQGFREADLVREGTYDCAEVCQNQMEMHAAVAEYDAIRERMTVYASTQVPYYV
                     HLMLAQILDMDMSRIRVIKPHVGGGFGCRTEALNVELIAALLARKAGGSVRLVINREE
                     TFITHRGRPQTDIRLKLGMRKDGRITAVECECYQRGGAHSGYGIVTILYSGSMLYAIY
                     DLHNVKYIGKRVLTNTPPCGAFRGHGTVDIRFAFESLLDEMASELALDPLAVRRANYL
                     TAPTFTDNDLMVNSYGLPQCVDWVEQASGWRARKGKLPKGKGLGFACSHYISGASKPV
                     NWTGEPHATVKIKLDFDGSIVVLSGAADIGQGSSTILVQTVGEVLGLPLSRIRIVTGD
                     SEVVPKDNGSYSSRVTFMVGNAAIDAAQNLKRVLVAAAARKLEANPEEIECLGELYRA
                     GAQDRGLTFNEVVVEALKDSGTITVTGNYSTIPQSHGGKKYRGAAIGGTMGYSYSAQV
                     VEVSVDEETGVVIVDKVWVAHDCGKALNRLSVEGQVQGSVWMGMGQAMSEETAYHEGL
                     LVTGNMLDYRVPTIEDSPPIEVGIIESNDPHGPFGAKEAGEGSLAAFLPALTNAVANA
                     IGVRFNTLPVTPDRVFAALEKRRRAGNGNAGKASNADPR"
     gene            complement(3904..4386)
                     /locus_tag="VIQ50_10380"
     CDS             complement(3904..4386)
                     /locus_tag="VIQ50_10380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010975049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEY9360831.1"
                     /translation="MARILELVLNGRRRVDAVADNLLLLDYLREVVGLTGTKTGCDGG
                     ECGACTVLVDDQPRLSCLTLAAGVNGQRIDTVESLAQDGRLSAVQRGFHEKLGSQCGY
                     CTPGFIMASAGLLRRNPRPSEQEIRAALGSNICRCTGYVKIIEAVRYAAELHAGGVAP
                     "
     gene            4647..5684
                     /locus_tag="VIQ50_10385"
     CDS             4647..5684
                     /locus_tag="VIQ50_10385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360832.1"
                     /translation="MQLANTRIPAALIALSALTATGLTCASAADYYAGKSIDLLIGAP
                     PGGGYDIYARTLARHYGRHIPGQPSIVAKNMPGAGSARAAGFIGTMAPRDGTAIAAIM
                     PGAVMGPLLDEKAEGLFDPTKVLYLGTANSGTRVCVARQGSKIKTFNDARVQKAAFGG
                     VSTNDSTREYGFMLKKTAGALYDVVSGYSGTAEIALAMERGEIDGACGWDWASLKSQR
                     PDWIRDGKINVLLQVGLEPNDELTRMGVPSVFKYVSHEDDRKVVELIISQQVFQRSYI
                     AAPALTAEQLDTLRSAFDATVHDPEFLKDAETVRIDISPLSGAKVQDLVAKLYAASKD
                     IVVRARQAISP"
     gene            5692..6564
                     /locus_tag="VIQ50_10390"
     CDS             5692..6564
                     /locus_tag="VIQ50_10390"
                     /inference="COORDINATES: protein motif:HMM:NF025091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/PEP mutase family protein"
                     /protein_id="HEY9360833.1"
                     /translation="MQTKPTWKKLLARGEPLLLPCAYDALSARLIERASFVAYAVGGY
                     ALVGARHALPDIGLVGFGEMSAGIRDIMAASSLPVLVDCDDGYGDVKNVARTIAGYEA
                     MGVSAIFMEDQRAPKRCGHMAGKDVIEADVMAAKVRAAADARRSAEFFIIARTDARAV
                     HGLDDALRRAEIYLKAGADGLFIEAPQSAEELTRIGRAFAGVPQLANMVEGGGRTPVL
                     PPHELYRLGFAMVAYPTTLIFRVARALEAALADLKAARPAGKNDGVDFETFKDIVSLG
                     RWAEVEQRNAASGK"
     gene            7063..7677
                     /locus_tag="VIQ50_10395"
     CDS             7063..7677
                     /locus_tag="VIQ50_10395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011504583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEY9360834.1"
                     /translation="MFGMRHSCGSPFPGKWAAGRGWRGHFRSGWGGRHGMGGNMMRAG
                     RMLAQGDLRLIALALIAEQPRHGYEIIKVLEDKTAGWYSPSPGIVYPTLTYLEEAGYV
                     TAQAEGAKKLYTITEEGRAYLDDNRDFVDAVLERLAAIGEKVARMRRRFGGEDEERHG
                     MPPLVRAALENLRDVAAKRLDDDAEAETKVVEVLARAAAELKKA"
     gene            complement(7697..>8491)
                     /locus_tag="VIQ50_10400"
     CDS             complement(7697..>8491)
                     /locus_tag="VIQ50_10400"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9360835.1"
                     /translation="QQVVVDNRAGGSGLIGTRVVIKSAPDGYTLFLGHTGSIAINPSL
                     YTNAGFDPRKDFAPIGLIASMPVALLAHPSFPAKTIGEAVTIAKSAGPNFNIGTSAVG
                     TGGYLTAELFKSVTRIDATIIPYKGTAQVMNDLLGNHVPIAFGVLPPALGNLQAGTLR
                     AIAVLAPARFSLLPDVPTANESGLPGFESVLHYGLLAPAGTPQPIVERLNRALRVVVD
                     SDDVKQRILAEGGDPLTSTPEDYAKDIDGEETKWGTLVRKLDLKVE"
BASE COUNT         1495 a         2759 c         2754 g         1483 t
ORIGIN      
        1 ccgtgacggc acgttagagc gggccggtgt cacatatgat gtagctggct gtacaatggt
       61 cgcgacggac ggctcgtaag gagcgaccgc ctggcttttc accgcgggct caatcaacca
      121 atggaagccc accgcaaaga cggtgtaaac cgccacgcat cctccgatca ctgctaccac
      181 ggaggagctt cgtgaccgcg acctgcccaa acgcaactta gacccccgca tgcgccaccc
      241 atgatctacc atcacttagt cgcagcggac ggcagattgg ttcaatcccc cctattgcac
      301 cgcactggcc tgtaattgcc tgtaattggc gggatgcgag ctgatctgga cgccagggcg
      361 ggcgtgcacg gatgggattg ctgcctaggg taactgcgta ccggcccccg ctgcgccgtc
      421 ctcccgtcat ccattccggg aaatcgaaat ggacacggtc ccctcaccct gggggcctta
      481 tggtcacccc gcgaagagcc gcgcgatcag ccgccgcgcc agcaccccgg ccacgcggcg
      541 ccgataatgg ccgggggtga acgtcgtctt catcgacatg atttggtccc gcacgagcgc
      601 gtcgagaccg ttgaacacgc gggcctcgag cggtccgccg cacagctccg cggtgccctc
      661 gagcatgacc ggccgtggat tggtgccggt gaaagcgacg cgcagatctg ccagcacgtc
      721 gccttcgcgg cgtaacgcca cagccacccc tgtcaccgga tattcgatcg agcggcgtat
      781 gcggaccttg tcgtaggccg agcgcaggcc gacggtgttg ctcgcccgca ccgcggtgac
      841 gaactcaccc ggccgcagcg agagataata cttgccatca ccctcgttct cggtgatcgg
      901 ccgatcttgc cgcgcatagc cgatatagag gttctcgagc gcgatggtgc gcctgcctgc
      961 ggggccggca agatcgacct cggcgttgag agcgagcaag gcgggcgcga gatcgccgct
     1021 gaaggtcgcg aagcacacgc cgcggctttt cggcgcgaca tgacagactt cgcccgtggt
     1081 cttgagacaa tggtggttgg cggcgcgcca ccattcgctc tggttataga aaagacagcg
     1141 cgtgtcgaga caaaggttgc cgccgaccgt ccccatgttg cgatgagtcg gtccggctat
     1201 gaattccgca gcctgcgcca ccaccggata gtgccgcatc acctcttggt gcgcggcgac
     1261 ctcggcgatg ttgacggcgg cgccgatctc gagcgagcgc gcatcggccc tgatcgcgcg
     1321 cagctccgcg acgcgattga tgtcgatgag caccggcggg gcgatgatgc cgcgccggat
     1381 attgaccacg aggtcggtgc cgccgcccag gagacggctg tcgggatggc gtgcgcgtgc
     1441 gccgatcacc tcctcgagcg tcgctgcccg cacgagcgca aactccggca acgcatccat
     1501 tatcgcgggt ccgcgttgct tgctttgccc gcgtttccat tgcccgcgcg ccgccgcttc
     1561 tccagcgcgg cgaacacacg gtcgggggtg accggcagcg tgttgaacct cactccgatt
     1621 gcgttggcga cggcattggt cagcgccggc aggaacgccg cgagcgagcc ctcgcccgcc
     1681 tccttggcgc cgaacggccc gtgcggatcg ttgctctcga tgatgccgac ctcgatcggc
     1741 ggtgaatctt cgatcgtcgg gacgcggtaa tcgagcatgt tgccggtgac gagcaagccc
     1801 tcgtggtacg cggtttcctc gctcatcgcc tgccccatgc ccatccacac cgagccctga
     1861 acctggccct cgacgctgag gcggttgagc gccttgccgc aatcgtgcgc gacccacacc
     1921 ttgtcgacga tcaccacgcc cgtctcctcg tcgacgctga cctccaccac ttgcgcggag
     1981 tagctgtagc ccatggtgcc gccgatggcg gcgcctcgat acttcttgcc gccatgcgat
     2041 tgcgggatgg tcgagtaatt gccagtcaca gtgatggtgc cgctgtcctt gagcgcctcc
     2101 accaccacct cgttgaaagt gagccccctg tcctgcgcgc cggcgcggta gagctcgccc
     2161 aggcactcaa tctcctcggg gttggcctcg agcttgcgcg cggccgcggc gaccagcacg
     2221 cgtttgagat tctgcgccgc atcgatggcg gcattgccaa ccatgaaggt cacgcgcgac
     2281 gaataggagc cgttgtcctt cggcaccacc tcgctatcgc cggtgacgat gcgaatgcgc
     2341 gagaggggaa gcccaagcac ctcgccgacg gtctggacca ggatcgtcga cgagccctgc
     2401 ccgatatcgg cggcgcccga gagcacgacg atggagccgt cgaaatcgag cttgatcttg
     2461 acggtcgcgt gcggctcgcc ggtccagttc acgggcttcg aggcgccgct gatgtaatgc
     2521 gagcaggcga atcccaggcc cttgcccttg ggcagcttgc ccttgcgcgc ccgccaaccg
     2581 ctcgcctgct cgacccaatc gacgcactgc ggcagcccgt agctattcac catcaaatcg
     2641 ttgtcggtga aagtcggcgc cgtcaaatag ttcgcgcgtc gcaccgccag cggatcgagc
     2701 gcgagctcgc ttgccatctc gtcgagcagg ctctcgaagg caaagcggat gtcgaccgtg
     2761 ccgtggccgc ggaacgcgcc gcagggcggc gtgttggtga gcacgcgctt gccgatatat
     2821 ttgacgttgt ggagatcgta gatggcatag agcatcgagc cggaatagag gatggtcacg
     2881 atgccgtagc cggaatgggc gccgccgcgc tgatagcatt cgcattcgac cgcggtgatc
     2941 cttccgtcct tgcgcatgcc gagcttgagg cggatatcgg tctgcggccg cccgcgatgc
     3001 gtgatgaaag tctcctcgcg gttgatcacc aggcgcacgc tgccgccggc cttgcgcgcg
     3061 agcaatgcgg cgatcagctc gacgttgagc gcctcggtgc ggcagccgaa gccgccacct
     3121 acatgcggct tgatcacgcg gatgcgggac atgtccatgt cgaggatctg cgccagcatc
     3181 agatgcacgt aataggggac ctgcgtgctg gcgtagacgg tcatgcgctc gcgtattgcg
     3241 tcgtactccg cgacggcggc gtgcatctcc atctggttct ggcagacctc ggcgcaatcg
     3301 taggtgccct cgcgaacgag gtcggcttcg cggaagccct gcgccacgct gccgagctcg
     3361 aacagcacgt cgcgctcgac attgttcggc cgatgggcat ggatcgcgct cgcgccagcc
     3421 gccatcgcct gtttcgagct gtagtaggca ggcagctccc gcactttgag cttgatgaga
     3481 tcgagcgcgt gcttggcggt ggcgtcgtcg attgcggcca ccgccgcgac cggctcgccg
     3541 cgatagcgca ccttctcgcg cgccaaggga tgctcgctgc gtgcgatggg cagcacgccg
     3601 aaggtcttgt cgcaatcggc gccggtgacg atcgccttca cgccagggag ccgcaaggcg
     3661 gcggagacat cgacttcgag gatctcggca tgggaatagg ggctgcggaa gatgcggccc
     3721 gccagcaggc ccggcgcgac gaaatcggcg gtgtatttcg cccggccgga gaccttgtcc
     3781 ggaccatcga taaggggcac gtgggcgcca atgctgtgcg ctgcggcgat ctcattcatg
     3841 gcgcgagccg gtgctctctc cacccactgg aggcagcgcg gtgtcgtcgc tgcgccgcga
     3901 gtgtcacggc gccactccgc cggcgtgaag ctcggcggcg tatcgcaccg cctcgatgat
     3961 tttgacgtag ccggtacagc ggcagatgtt gctgccgagc gccgcgcgaa tctcttgctc
     4021 gctggggcgg ggattgcggc gcaacaagcc ggccgatgcc atgatgaacc ccggcgtgca
     4081 atagccgcac tgggagccaa gcttctcgtg gaagccgcgc tgcaccgccg aaaggcgccc
     4141 atcctgagcg agcgattcca ccgtatcgat gcgttggcca ttcacgccgg ccgcaagcgt
     4201 gagacacgac aaacgcggtt gatcatcgac cagcacggtg caggcaccgc actcgccgcc
     4261 gtcgcagccg gtttttgttc cagtcaggcc gacaacttcc cgcaaataat ccagcagcaa
     4321 cagattgtcc gccaccgcat cgacgcggcg acggccattc aaaacaagct cgagaatgcg
     4381 ggccatgcgt gccgttccaa tatcaatatt cggcacgacc ttcaaatcgg atgccgcgca
     4441 tgtacgcgca aggggcgcca ggcgtcgcag gcgtaggatc ggttgagcgc agcgaaccca
     4501 acgcgagcga taaccgtgat caaagccttg gcctcacgtc gagctgattt cgtggagact
     4561 ttctcggttg cgcggcagac gacgagttgt acggcgattg cggatgactt agctttcgcg
     4621 atgcctttgt acggcggaga tttgcgatgc agctcgccaa tacccgcatc ccggccgcgc
     4681 tgatcgcgct cagcgcgctg acagcgacgg gactgacctg cgcctccgcc gccgattact
     4741 acgccggcaa gagcatcgat ctcctaatcg gggcgccgcc cggcggcggc tacgatatct
     4801 atgcgcgcac gctcgcgcgc cattatgggc gccacattcc cggccagccc tcgatcgtgg
     4861 cgaagaacat gccgggcgcg ggcagcgcgc gagcggccgg tttcatcggc acaatggcgc
     4921 cgcgagacgg gacggcgatc gccgccatca tgcctggcgc ggtgatgggg ccgctgctcg
     4981 acgagaaagc cgaggggctg ttcgacccga ccaaggtgct ctatctcggc accgccaaca
     5041 gcggcacgcg cgtctgcgtc gcgcgccagg gctccaagat caagactttc aacgacgcgc
     5101 gcgtgcagaa ggccgccttc ggcggcgtct cgaccaacga ttcgacccgc gaatacggct
     5161 tcatgcttaa aaaaactgcg ggcgcgctct acgacgtggt ttccggctac agcggcaccg
     5221 ccgagatcgc gctggcgatg gagcgcggcg agatcgacgg cgcgtgcggc tgggactggg
     5281 caagcttgaa gtcgcagcgc cccgattgga ttcgagacgg caagatcaac gtgctgctgc
     5341 aggtcggtct ggaaccgaac gacgagctca cgcgcatggg cgtcccctcg gtgttcaaat
     5401 acgtgagcca tgaggacgac cgcaaagtcg tcgaactgat catcagccag caggttttcc
     5461 agcgctccta tatcgccgcg cccgcgctaa cggcggagca actcgacacg ctgcgttccg
     5521 ccttcgacgc caccgtgcat gacccagagt tcctcaagga cgcggagacc gttcgcatcg
     5581 atatctcgcc gctttccggc gccaaggtgc aggacctggt cgcgaaactt tacgccgcgt
     5641 cgaaggacat cgtcgtgcgg gcgcggcagg cgatcagccc ctaggctgtg catgcagaca
     5701 aaaccgacat ggaagaaatt gctggcgcgg ggggagccgc tgctcctgcc ctgcgcttat
     5761 gacgcgcttt cggcgcgcct catcgagcgc gcgagctttg tcgcttatgc agtcggaggc
     5821 tatgcgctcg tcggtgcgcg ccatgcgctg cccgacatcg ggctcgtggg cttcggcgag
     5881 atgagcgccg gcatccgcga catcatggca gcgagcagcc tgccggtgct ggtcgactgc
     5941 gacgacggct acggcgacgt caagaatgtc gcgcgcacga tcgccggcta cgaagcgatg
     6001 ggcgtgtcgg cgatcttcat ggaggatcag cgcgcaccca aacgctgcgg ccacatggcg
     6061 ggcaaggatg tgatcgaggc tgacgtcatg gcggcgaagg tccgcgcagc ggcggatgca
     6121 cgccgcagcg cggaattctt catcatcgcg cgcaccgacg cccgcgcggt gcacgggctc
     6181 gacgatgcgc tgcggcgcgc ggagatttat ctcaaagccg gcgcggacgg cctgtttatc
     6241 gaggcgccgc aatcggccga ggagttgacg cggatcgggc gcgcgtttgc aggcgtgccg
     6301 caactggcca atatggtcga gggcggcgga cgcacgccgg tgctgccgcc gcacgagctc
     6361 taccgtctcg gcttcgccat ggtcgcttac ccgaccacgc tgatcttccg cgtcgcacgc
     6421 gcgctcgagg ccgcgctcgc cgatctcaag gccgctcggc ccgcaggcaa gaacgacggc
     6481 gtcgacttcg agaccttcaa ggacatcgtc tcgctggggc gctgggccga ggtcgagcaa
     6541 cgaaacgcgg cttcgggcaa gtgacgagcg cgatcaaacg ctcccttgcc aggctcttca
     6601 ctggtgactc cgcagcttcg cgtattcccg ctgaaaagcc tcgtccaaga gcttagtgga
     6661 tcccgggtcg agcgattttg cgccgcaagc ttcgcaggtg ccgatcgaga ccgtgacttc
     6721 gcaacggaca tatcctttgt cgctcgattg tcgaaaggcc attgcttcca tgcgcttgtg
     6781 gacacggccc tttctgcaaa tgtcgcaagt cacaggttct tcctcggcga acatcgccta
     6841 tcccctcgcc gtcaccctgc cggcttagtg tgcgggacga cttttcaggg gtgtgtgagc
     6901 tacttcacac ttgggggaaa tctcagattc tcgcctgctc caacttcacc ggagcattcc
     6961 gcaacagcgc gggagcccgg gcggacgatc aaaagatata tcttgcgcta catcgatgaa
     7021 agttgtatct acagatatat ctgaaaccta agggaggccg agatgttcgg catgagacat
     7081 tcgtgtggat caccatttcc tggaaagtgg gcggccggcc ggggctggcg cgggcacttc
     7141 cgctccggct ggggcggccg tcacggcatg ggcggcaata tgatgcgggc cggccgcatg
     7201 cttgcgcagg gcgacttgcg cttgatcgcg cttgcgctga tcgccgagca gccgcggcac
     7261 ggctacgaga tcatcaaggt gctcgaggac aagaccgccg gctggtattc gccgagcccg
     7321 ggcatcgtct atccaacgct gacttatctc gaagaagccg gatacgtcac cgcgcaggcg
     7381 gagggcgcca agaagctcta taccatcacc gaggagggcc gcgcctacct cgatgacaac
     7441 cgcgatttcg tcgacgccgt gctcgagcgt cttgctgcca tcggcgagaa ggtcgcgcgc
     7501 atgcgacgtc gcttcggcgg cgaggacgag gagcgccacg gcatgccgcc gctcgtgcgg
     7561 gcggcactgg aaaatctgcg cgacgtcgcg gccaagcggc tcgatgatga cgcggaagcg
     7621 gaaacaaagg tggtcgaggt gctcgcacgc gccgcggcgg aactgaagaa ggcgtaaaca
     7681 ggccaggcgg cgcgccttac tccaccttca gatcgagctt gcgcacaagc gtgccccact
     7741 tcgtctcctc gccgtcgatg tccttggcgt agtcctccgg cgtcgaggtc aaagggtcgc
     7801 cgccttcggc caggatccgt tgcttcacat catcactgtc gaccaccacg cgtaacgcgc
     7861 ggttgagacg ctcgacgatc ggttgcggcg tgcccgccgg cgccagcagc ccgtaatgca
     7921 ggaccgactc gaatccagga agtcccgact cgttcgcggt cggcacgtcg ggcagaaggc
     7981 tgaaccgcgc gggagcgagc accgcgatcg cgcgcagcgt gccggcttgc agattgccga
     8041 gtgcgggcgg cagcacaccg aacgcaatcg gcacatggtt gccgaggagg tcgttcatca
     8101 cctgcgccgt acctttgtaa gggatgatcg tcgcgtcgat cctggtgacc gatttgaaca
     8161 actcggcggt gagatagccc ccggtgccga ctgccgaggt cccgatgttg aagttcggcc
     8221 ccgcgctctt tgcgatcgtg accgcctcgc cgatcgtttt cgccgggaac gaagggtgcg
     8281 ccagcagtgc cacaggcatc gacgcgatca gcccgatcgg tgcgaagtcc ttgcggggat
     8341 cgaagccggc attggtgtag aggctgggat taatggcaat cgatccggtg tggccgagaa
     8401 acagcgtgta gccgtcgggc gcgctcttga tgacgacgcg agtgccgatc aggcccgaac
     8461 cgccggcgcg gttatccacc accacctgct g
//
LOCUS       DATCWM010000527         5686 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_371101, whole genome shotgun sequence.
ACCESSION   DATCWM010000527 DATCWM010000000
VERSION     DATCWM010000527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5686)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5686)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5686
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_371101"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(81..1142)
                     /locus_tag="VIQ50_10405"
     CDS             complement(81..1142)
                     /locus_tag="VIQ50_10405"
                     /inference="COORDINATES: protein motif:HMM:NF014899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360836.1"
                     /translation="MMSSVIGGAMLPHAPQFFTLPETEDKNVVEHVRQVGADIGRKLR
                     ALRPDLWIIFSNDHAEQFFHTTAPPFTIHVGGEATGDFAGRKFYWKIPSEIGFEIVRQ
                     LYRQNFDPAFTSTAKIDYAIGIPLTHLGHTDPVLPIYVNAYLPPQPTMERCYAFGQAV
                     ARTVTALGLKTVVLASGGMSHFPGTDRYANPELDWDRRALGKLEAGHLKSLIGYDERE
                     LDDTGNIELRCWACAAGALGERKPDVVSMDPSWHHNYASLGWTGSSAEAQRAAHYPSI
                     KPELVELTSALHGLAHDAELRAQYLSDPPAFADKFQLPPDQREALIKLDLASIVKMGA
                     HPLVPFLAQLQVQRQRPRP"
     gene            1324..2316
                     /locus_tag="VIQ50_10410"
     CDS             1324..2316
                     /locus_tag="VIQ50_10410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9360837.1"
                     /translation="MVEVPITIACGNYDRTRAIRDGRVKVEGCAATYLPLYPEEIFFR
                     AFRYQEFDVSELSFSSYIRTVAAGNSAYIGIPAFVSRLFRHSGIYVRADAGIRAPADL
                     KGKRVGLPEYQITAVVWMRGMLQHEYGVLPSEIHWRSGGQEEPGRDERTPLKPIAGLD
                     LKPIGREQTLVGMLRDGELDALFTARAPSSFLRGEPHIRRLFPNTREAEQAYYKKTRM
                     FPLMHLVGIRKELVQKYPWLPSSVYKAFCEAKALAMVDLLDVNALMVTLPWLIPETEE
                     TMAIMGKDFWPYGIAENMREITALTQYLHEQGLIERKVAVEELFHPSMFEISKV"
     gene            2402..3634
                     /locus_tag="VIQ50_10415"
     CDS             2402..3634
                     /locus_tag="VIQ50_10415"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY9360838.1"
                     /translation="MRQDDRVIVVGAGPVGAVTALALVRKGIPVTLIEAEAEPPEDQR
                     AATIHPPTVEMLAELGLRNEAFAEDASGGLLSPIFHFRDRVTGELVAVFDISLLEGEV
                     PYPFVVQWEQYKLVRAAKPHLEASGIAEIRFSTKVTGLTQGADYVEVTLAGAERDSER
                     LLGRYVIGADGGRSTVRRLSEIDFEGFTWPERFIKIGTSFDFGATGRGFCTRNYFSDP
                     NEWLNLFKVKGNGPPGIWRGIMPVPADESDEQALSMESIQRRLHGIHAKSGDYEIPYH
                     ALYSVHQRVAATFNTGRVLLAGDAAHVNNPIGGMGMNGGIHDAMNLTAKLVDVWFGRA
                     GPEVFDRYTRQRRKAQVDYVQAQTIQNKRSLEEKDPVIRRKHLDELRRISEDVKLHKQ
                     FLYRAALFDSLNSANAVE"
     gene            complement(3701..5116)
                     /locus_tag="VIQ50_10420"
     CDS             complement(3701..5116)
                     /locus_tag="VIQ50_10420"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HEY9360839.1"
                     /translation="MYKDLREFIELVEKLGALRRIEGADPRFEIGAITEIAAGRSDGP
                     ALLFDAIKGFPRGFRIFTNATTSPQRAALALGVDPTLRPLDALKAWIEKRKSLKPRAP
                     VTVQEAAFLQHSLSGKDVDLAKFPAPIWHRHDGGAFIGSGSIVIMRDSDGGWINASIY
                     RVQVHGRDKVTVQFDHAGRHGAIIAKRYWEQDKPCPVAVVSGEDPALFVAGFEYLPAG
                     QSEYEFAGGIKGAPIEVHPGPLTGLPIPAHAEIVLEGHLLPISESALPEGPFGEFTGY
                     YASEARPAPVMQVSAVHHRADPILLGSPPMKPPRFHFGLPFRAATIWQNLDAAGVTDV
                     VGAWQHVSQLMTVVALKQRYDGHAKRAALVAAAHSYMARLVVVVDDDVDPSDLNDVMW
                     AVATRCEPSEQIDIVRNAWSSALDPRISAADKSRGITAHSKLIIEACRPFAWIGKFPP
                     TSALSLAEARAIEEKWGAALT"
     gene            5233..5631
                     /locus_tag="VIQ50_10425"
     CDS             5233..5631
                     /locus_tag="VIQ50_10425"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY9360840.1"
                     /translation="MAKLRHIALIVPDPEKAAKFFENAFDMKVAGKARRGLYVSDGTV
                     NVALLKQEGDEKVGIYHFGMWVDDLDEAEKKVVGAGGKYLAGRPESAARGATAHSYYE
                     AKYKDPLGIVFDLTHTGWVGAVKDVVAAKS"
BASE COUNT         1061 a         1786 c         1841 g          998 t
ORIGIN      
        1 cgctcgcagc gcctagttga ataccaatgt gcgcccgcgt caacgaccga aggcgcatgc
       61 agcttcgcaa atggcccgcg ctacggccgc gggcgctgcc gctgaacctg caattgcgcc
      121 aggaacggaa ccaagggatg cgcgcccatc ttcacgatcg aggcaaggtc gagcttgatg
      181 agcgcctcgc gctgatcggg cgggagttgg aatttgtcgg caaaggccgg cggatcggat
      241 agatattgcg cgcgcagctc ggcgtcatgg gcgagaccgt gcagcgccga cgtcagctcg
      301 acgagctccg gcttgatcga gggatagtgc gccgcgcgct gcgcctcggc ggagctgccg
      361 gtccaaccga gcgacgcata gttgtgatgc cagctcggat ccatcgacac gacgtcgggc
      421 ttgcgctcgc ccagcgcgcc ggccgcgcac gcccagcagc gcagctcgat attgccggta
      481 tcgtcaagct cgcgctcgtc atagccgatc aaggatttca agtgcccggc ctcgagcttg
      541 ccgagcgcgc gccgatccca gtcgagctcc ggattggcgt agcggtcggt gcctgggaaa
      601 tgcgacatgc cgccgctcgc cagcaccacg gtcttgaggc cgagcgcggt caccgtgcgc
      661 gcgacagcct gcccgaaggc ataacagcgc tccatcgtag gctgcggcgg caggtaggca
      721 ttcacataga tcggcagcac cgggtccgtg tggccgagat gcgtcaatgg aatgccgatc
      781 gcataatcga tcttggccgt gctggtgaag gcgggatcga agttctgccg atagagctga
      841 cgcacgatct cgaagccgat ctcgctcgga atcttccagt agaatttacg gccggcgaaa
      901 tccccagtcg cctcgccgcc cacgtggatg gtgaacggcg gcgcggtggt atggaagaac
      961 tgctcggcat gatcattgga gaagatgatc cagaggtcgg gccgcagcgc gcgcagcttc
     1021 ctgccgatat cggccccgac ctgtcgcacg tgctcgacga cgtttttgtc ttcggtttcg
     1081 ggcagggtga agaactgagg cgcatggggc agcatggcgc cgccgatcac gctcgacatc
     1141 atgacttttc tcctcgggcg cttccgatgc aggcgagcat caggtcgcgt cgcaggcatg
     1201 aaaatatcgc gcagatcagg gtacaacaag gcgacgcttc acagccaaaa cagaagcaag
     1261 taccctctgc cggaccccgc cgtttgtacc catcccgcca ccaagccgat caggagcccc
     1321 taaatggtcg aggtgccgat aacgattgcg tgcggcaatt acgatcgcac gcgtgccatc
     1381 cgggacggcc gggtgaaggt ggaaggctgc gcggcgacct acctgccgct ctatcccgag
     1441 gagattttct ttcgcgcctt ccgctaccag gaattcgacg tctcggaact ttcgttctcg
     1501 agctacatcc gtaccgtggc ggcagggaat tcggcctata tcggcattcc ggccttcgtg
     1561 tcgcggctgt tccgccattc cggcatttac gttcgcgccg atgccggcat ccgcgctccc
     1621 gccgatctca agggcaagcg ggtcggcttg ccagaatatc aaatcaccgc cgtggtctgg
     1681 atgcgcggga tgctgcagca cgaatacggc gtgctgccga gcgagatcca ttggcgcagc
     1741 ggcggccagg aggaaccggg acgcgacgag cgcacgccgc tcaagccgat tgcaggtctc
     1801 gacctcaaac ccatcggcag ggaacagacg ctcgtcggca tgctccgcga cggcgaactc
     1861 gacgcgctgt tcacggcacg cgcgccctcc tcgttcctgc gcggggaacc gcacatcagg
     1921 cgactctttc ccaacacgcg cgaggccgag caggcctact acaagaaaac ccgcatgttt
     1981 cccctcatgc atctcgtcgg catccgcaag gagctcgtgc agaagtaccc gtggctaccg
     2041 tcgagcgttt acaaggcgtt ctgcgaggcc aaagcgctgg cgatggtcga cctgctcgac
     2101 gtcaatgcgc tgatggtgac gcttccttgg ctgatcccgg aaacggaaga gaccatggcg
     2161 atcatgggga aagatttctg gccctacggc atcgcagaga acatgcgaga gatcacggcg
     2221 ttgacgcaat atctgcacga gcagggcttg atcgagcgaa aagttgcggt cgaggaattg
     2281 tttcatcctt cgatgttcga gatttcgaag gtctgatatc gaagcctccg cgcgcgagct
     2341 gctgccacgc cgcgccattg cggcggacta acgtgtatag tgcgatgcgt tggagcggat
     2401 gatgcggcag gatgaccggg tgatcgtggt cggagccggg cccgtggggg ccgtgaccgc
     2461 gcttgcattg gtcagaaagg gcatcccggt cacgctcatc gaagccgagg ccgaaccgcc
     2521 cgaggatcag cgcgccgcca ccattcatcc tccgaccgtg gaaatgctgg ccgagctcgg
     2581 gctcaggaat gaagcctttg ccgaagatgc gagcggcggc ttgctctcgc cgatcttcca
     2641 ctttcgcgac cgcgtcaccg gcgagctggt cgccgtgttc gacattagcc tgctcgaggg
     2701 cgaagtgccc tacccgttcg tggtgcagtg ggagcagtac aagctggtgc gggcggcaaa
     2761 accgcacctc gaggcgagcg gcatcgccga gatccgtttc tccacaaagg tgaccggcct
     2821 cacccagggc gccgactacg tcgaggtgac gctggccggc gcggagcgcg acagcgaaag
     2881 acttctcggc cgctatgtca tcggtgccga tggggggcgc agtacggtgc ggcggctgtc
     2941 ggagatcgat ttcgagggtt tcacctggcc cgagcggttc atcaagatcg gcaccagctt
     3001 cgacttcggc gcaaccggcc gcggcttctg cacgcgcaac tatttttccg accccaacga
     3061 gtggctcaat ctattcaagg tcaagggcaa cggcccgccc ggaatctggc gcggcatcat
     3121 gccggtcccc gccgacgaat ccgacgaaca ggccttgagc atggagagca tccagcgccg
     3181 cttgcacggc attcacgcca agagcggcga ctacgagatt ccttatcacg cactctattc
     3241 cgtgcatcag cgagtggccg cgacgttcaa cacgggccgc gtcctgctcg ccggcgatgc
     3301 cgcccacgtc aacaatccga tcggcggcat ggggatgaac gggggcatcc atgacgcgat
     3361 gaatctcact gccaagctcg tcgacgtctg gttcggccgc gccggacccg aggtgttcga
     3421 ccgctacacg cgacagcggc gcaaggcgca agtcgattac gtgcaggcac agacgattca
     3481 gaataagcga tcgctcgagg aaaaagatcc ggtgatccgc cgcaagcatc tcgacgaatt
     3541 gcgccgcatc tcggaagacg tgaaactgca caagcagttt ctctatcgcg ccgcgctctt
     3601 cgacagcctc aattcggcca acgcggtgga gtgagttccg gttcgccggc accgtccgcc
     3661 gggatgacga gtcgatgggg gagccgagaa ccagaagcgt tcacgtcagc gccgctcccc
     3721 acttctcctc gatcgcccgg gcctcggcca gcgagagcgc cgaggtcggc ggaaatttcc
     3781 cgatccaagc gaacggccgg caagcttcga tgatcagctt cgaatgcgct gtgatgccgc
     3841 gcgacttatc ggcggcggaa atgcgcggat cgagcgccga gctccaggcg ttgcgcacga
     3901 tgtcgatctg ctccgacggt tcgcaccggg tcgcgaccgc ccacatcacg tcgttgaggt
     3961 cggacggatc gacgtcgtcg tccacgacga cgacgagtcg cgccatgtag ctgtgcgcgg
     4021 ccgcaacgag cgcggcgcgc ttggcgtggc cgtcgtagcg ctgcttgagc gccactacgg
     4081 tcatgagttg cgagacgtgc tgccacgcac cgaccacgtc ggtgaccccc gcggcgtcga
     4141 ggttctgcca gatggtagcg gcgcggaacg gcagcccgaa atgaaaccgc ggcggcttca
     4201 tcggcggtga gccgagcagg atcggatcgg cacgatgatg cacggcgctc acttgcatga
     4261 ccggggcagg ccgtgcctcc gaggcgtaat agccggtgaa ctcgccgaac ggaccttcgg
     4321 gcaatgcgct ctcgcttatc ggcaggagat gcccttcgag cacgatctcg gcgtgggctg
     4381 gaatcggcag cccggtcagc ggcccgggat gcacctcgat cggtgcgcct ttgatgccgc
     4441 cggcgaactc gtattccgat tgcccagcag gcaggtactc gaatccggcg acgaacagcg
     4501 cgggatcctc gccgctgacg acggcgaccg gacaaggctt gtcctgctcc cagtatctct
     4561 tggcgatgat ggcgccgtgc cggccggcgt gatcgaactg caccgtcacc ttgtcccggc
     4621 cgtgcacctg cacccgatag atcgaggcgt tgatccagcc gccgtccgaa tcgcgcatga
     4681 tcacgatcga gcccgagcca atgaaggcac cgccgtcgtg gcgatgccag atgggcgccg
     4741 gaaacttggc gaggtcgacg tccttgccgc tgagcgagtg ttgcagaaaa gcggcctcct
     4801 ggaccgtaac gggcgcgcgc ggcttgagcg acttgcgttt ctctatccag gccttgagtg
     4861 cgtcgagtgg ccgcaatgtc ggatcgacgc cgagcgcgag cgccgcccgt tgcgggctcg
     4921 tggtcgcatt ggtgaagatg cggaaaccgc gcggaaagcc cttgatcgcg tcgaatagaa
     4981 gggcgggtcc gtcggatcgc ccggccgcga tctcggtgat ggcgccgatc tcgaaacggg
     5041 gatcggcacc ctcgatgcgg cgcagcgccc cgagcttctc gacaagctca atgaattcgc
     5101 gcaagtcctt gtacatggcg ttcgcccctg ccgcgctcgg cgcgggtcag catagcaggc
     5161 cgcgcgcctt gtggtcaggc gcgcttcctc gctattctct tcaactccaa cggttcacga
     5221 aggacagagg tcatggccaa gcttcgccac atcgcgctca tcgttccaga tccggaaaag
     5281 gccgccaagt ttttcgagaa cgccttcgat atgaaggtgg cgggcaaggc gcgccgtggc
     5341 ctttatgtct ccgacggcac cgtcaacgtt gcgctgctca agcaggaggg agacgagaag
     5401 gtcggcatct accatttcgg aatgtgggtg gacgatctcg acgaggcgga gaagaaggtg
     5461 gtgggcgcag gcggcaagta tcttgctggt cggcccgagt cggcagcgcg aggggcgacg
     5521 gcgcattcct actacgaggc taagtataag gatccgctcg gcatcgtgtt cgatctcacc
     5581 cacaccggct gggtcggcgc ggtgaaggac gtggtcgccg cgaagagttg acgtcgcgca
     5641 ctgtgtgctc gctctcgaga cacactcggt ctgctccctc tcccat
//
LOCUS       DATCWM010000528         2030 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_160357, whole genome shotgun sequence.
ACCESSION   DATCWM010000528 DATCWM010000000
VERSION     DATCWM010000528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2030
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160357"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            315..1283
                     /locus_tag="VIQ50_10430"
     CDS             315..1283
                     /locus_tag="VIQ50_10430"
                     /inference="COORDINATES: protein motif:HMM:NF033542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEY9360841.1"
                     /translation="MEMLSFGGIDVSKDRLDITVLPDEQCSSVSNDAAGWAELIEQLR
                     GSLITAIGVEASGGYERGVVRALLAAGMSVRQINPFKLRQFAKASGILAKNDRLDARM
                     IASFVAIMPTRPAQRQTPMIEQLAAMLTVRRQLSDHKVATENASRLLEDAMLQRLSRR
                     RVARLTADIDLLDQRLVEIVTADPALAHRFRLLTSMPGVGAVLACTLIALLPELGQMS
                     RKQVAALVGLAPYDFDSGKLKGRRCIWGGRARVRHVLYMAALSASNWNPALKAFHDRL
                     AATGKKPKVVIVAVMRKMITTLNAMLRDGTAWVDRYSGRRSASTAR"
     gene            complement(1406..>2030)
                     /locus_tag="VIQ50_10435"
     CDS             complement(1406..>2030)
                     /locus_tag="VIQ50_10435"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9360842.1"
                     /translation="PVALGLVDSLKRPGGNLTGVATLTVQLGPKQLEILHELVPTATI
                     IALLVNPTNATNAETLSRDLQAAARTLGLQLHVLHASTERDFDTVFATLSRLRAGALV
                     IGSDPFFNSRSQQLAALAFRHAMPTMYPFREYAIAGGLISYGNSFADAHRQSGVYTGR
                     ILKGEKPADLPVQQSTKVELILNLRTAKTLGLTVPLPLLARADEVIE"
BASE COUNT          349 a          613 c          680 g          388 t
ORIGIN      
        1 ctcgatcgtg ccaggcgatc tgcggtcgag gaacccgatc accggcattg cgccttgctg
       61 cgcgcgcgcc gtgagcggcc acgccgccgc cgcgccgccg agcagcgtga tgaactcgcg
      121 gcgctttgta tgtcgggaaa gcagcattct gaggggcgac gggggttcgg tcatgaccgt
      181 ctccccgtcg cgaccggaag cccgcaggcg cttcggatcc gaaaccgcga atgagcttgg
      241 agctccagtc gcttcttcca tacccgaaca gttgcctggg cgcgagcccg catcaacaag
      301 gaagggatac gaagatggaa atgctgtctt tcggtggtat cgacgtgtcg aaggatcgtt
      361 tggacatcac ggtgttgccc gacgagcaat gttcttcggt gagcaatgac gctgccggct
      421 gggccgaact gatcgagcag ctgcgcggct ccttgataac ggcgatcggc gtcgaggcaa
      481 gtggtggcta cgaacgtggt gtcgtccggg ccttgcttgc ggccggcatg tccgtgcgcc
      541 agatcaatcc gttcaagctg cggcagttcg ccaaggccag cgggattctg gccaagaacg
      601 atcgacttga tgcgcgcatg atcgcatcgt tcgtcgccat catgccgacg cgaccggcgc
      661 agcggcagac gccgatgatt gaacagcttg ccgcgatgct tactgtccgg cgccagctca
      721 gtgatcacaa agtcgccacc gagaatgcgt ccagactgct ggaggatgcg atgctgcaac
      781 gtctttctcg ccgccgcgtc gctaggctta ccgccgacat cgacctgctc gaccagcgcc
      841 tggtcgagat cgttactgcc gatcctgctc tcgcccatcg tttccggctg ctcacctcca
      901 tgccgggggt cggcgccgtg ctggcttgca cgctgatcgc gctcttgccc gagctcggcc
      961 agatgagccg caaacaggtt gccgctctcg tcgggcttgc gccctatgac ttcgatagcg
     1021 gcaagctcaa aggacgccgt tgtatctggg gtggtcgcgc gcgtgtccgc cacgtgctct
     1081 acatggcggc gctgagcgct agtaattgga atcctgcgct caaagcattc cacgatcgcc
     1141 tcgcggcgac cggaaagaag ccgaaggtcg tcatcgtggc ggtgatgcgt aagatgatca
     1201 ccacgctcaa cgccatgctc cgtgacggta cggcttgggt cgaccgttac agcggtcggc
     1261 gcagcgcgtc gaccgcacgg tagccgttgc gctgagcgat ttggccgagt caaggccgta
     1321 gccgcgcgta gcgcgggggc gcgaagcgcc agccttgacg cggccaagtc gatcagcgat
     1381 ctccctgcga caaggtgaca gttgctcatt cgatcacctc gtcggcgcgg gcgagcagcg
     1441 ggagcggcac ggtgaggccg agcgtcttgg cagtcctgag attgaggatc agctcgacct
     1501 tcgtggattg ctggaccggt aggtcagcgg gcttctcgcc cttgagaatg cggccggtgt
     1561 agacgccgct ctgacggtgc gcatccgcaa agctgtttcc gtagctgatg aggccgcctg
     1621 ctatagcgta ctcgcgaaat gggtacatcg tgggcatcgc gtggcgaaag gccaatgcgg
     1681 cgagctgttg gctccggcta ttgaagaatg gatcgctgcc gatcacgagc gcgccggctc
     1741 gcagtctgga taaggttgcg aaaaccgtat cgaagtcgcg ctcggtgctc gcatgcagga
     1801 catgaagctg cagcccgagg gtgcgggccg ccgcctgcag gtctcgcgat agggtctcgg
     1861 cattggtggc attagttggg ttaacgagca gggcgatgat ggtggccgtg ggaaccagct
     1921 cgtgcagtat ttccagctgc ttcggcccta gctgcacggt cagggtggcc acgcccgtga
     1981 ggttgccgcc cggccgcttg aggctgtcga caagtcccag cgcgaccggg
//
LOCUS       DATCWM010000529         5069 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_198177, whole genome shotgun sequence.
ACCESSION   DATCWM010000529 DATCWM010000000
VERSION     DATCWM010000529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5069
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198177"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(133..1836)
                     /locus_tag="VIQ50_10440"
     CDS             complement(133..1836)
                     /locus_tag="VIQ50_10440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008962779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HEY9360843.1"
                     /translation="MNDMAWIKSYPEGVRWDVEIVPGAVQSILDNAVANWPDRPAIDF
                     MGKRISYRELGRLADRAARGLQQLGVKPGVHVGLFLPNTPHYVISFFGVLKAGGTVVN
                     YSPLDAAKVLEHKIEDSRTDILITLDMASLYPQMAAMLGKTRLKKLVVGSLAEITADP
                     DAVISEMKAARQLCEVAWDDRHVSFGQLIHNDGAFEAYPVADPAETIAVLQYTGGTTG
                     LPKGAMLTHANLTSACQQYKATTAGSPPVLVEGSERMLAVLPPFHIYALSVNVLFGVL
                     LGAEIIQHVRFDPKAALEEISSKQISVFCGVPTMFTALINHPETPKHSLRTLKYCGSG
                     GAPLPLEVAQQFTAITGCNLSEGWGMTETSPSGTFTPAQVGSMRKLGSCGMPMPGIVI
                     KFLGLEDDTRYVPPGERGEICIKGPNVMKGYWKKPDATADVTTADGFLRTGDVGYMDS
                     DGFVFIVDRTKDMLLCSGFNVYPRVLEEAIYKHPAVELVAVIGIPDKYRGQSPKAFVK
                     LKAGATAFTLEQLQAFLKDKLGKHEMVQALQILPELPMTAVGKPFKTALYDEEERKRA
                     V"
     gene            complement(1867..2634)
                     /locus_tag="VIQ50_10445"
     CDS             complement(1867..2634)
                     /locus_tag="VIQ50_10445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY9360844.1"
                     /translation="MSLAKLQDLKGRVALVTGGSRGLGLQIAEVLGELGAKVAITARK
                     QDELDAAAKHLNSLGIEALPLVCDMSRLETIAPMVERVISALGPIDILVNNAGTSWGA
                     PTIEHTIEGWNKVINLNVTAIFIVTQEVGRRCMVPRRSGKVINIASIQGLTGCYPDGT
                     PTIAYNASKGAVVNMTRTLANEWAPLGINVNAIAPGYFPTKMTAQLDQGATAQMSPMN
                     RGGGPEDLKGAAALLASDACAFITGQTIAVDGGVTAV"
     gene            complement(3223..4029)
                     /locus_tag="VIQ50_10450"
     CDS             complement(3223..4029)
                     /locus_tag="VIQ50_10450"
                     /inference="COORDINATES: protein motif:HMM:NF024039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator
                     ligand-binding domain-containing protein"
                     /protein_id="HEY9360845.1"
                     /translation="MHVTAYEMYGYALLSSATQADARSFAARYVRVVGPFCDFSYTYD
                     GGTVAVAFEPLHWPNPTEVVHCFAVEFALSAHLTTIRDRVSPAFAFSRVMLDYAPPAH
                     AAAYQSVFECQVLFGQRSCGYEYDRDDGPAALADARTHAMALEMCEQLLDEVNRAGGV
                     AADIRRLLIEQPGRYPSIETIASQLNMHPRALRRRLEAEGTSYRELLAEVRMRLAIEY
                     LRKTQMTNEEIASRLGYSEAANFRHAFTRWTGKSPSDFRGAAGAQHQSGR"
     gene            4390..>5069
                     /locus_tag="VIQ50_10455"
     CDS             4390..>5069
                     /locus_tag="VIQ50_10455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetate decarboxylase"
                     /protein_id="HEY9360846.1"
                     /translation="MKREQVLNQLTTPIGAPAFPRGPFRFTNREYLNILYRTDIDALR
                     AVVPEPLEIDDPLVRWEIMRMPDTSGLGDYTECGQVIQVRFGEEKGEYLHAMYLDNLP
                     ALASGREISAYPKVIGKPRLYIDSDTLVGTMDYGSLRVATATMGYKHRAMDLEEAKRE
                     ICVPTFMLKILWTYDSPKPGGEPRICELLRTEITDITVKGAWTGPARLELFAHALAPM
                     ADFPVREIV"
BASE COUNT          922 a         1613 c         1558 g          976 t
ORIGIN      
        1 cttatgataa actcgttgat caatggactc atcgccggac taaggttgcc gaggctgctg
       61 atgagcgcga gaccgcccgt catcgcgatc gcatgttcgt gtgaccgcct ggtaaagccc
      121 tcagatcagc acctagaccg cgcgtttgcg ttcctcctcg tcgtacaacg ctgtcttgaa
      181 aggcttgccg accgcggtca tcggcagttc ggggagaatt tggagcgcct gcaccatttc
      241 gtgcttgccg agcttgtcct tcagaaacgc ctgcaattgt tcgagggtga aagccgtggc
      301 accggccttc agcttgacga aggccttggg cgactggccg cgatatttgt cggggatgcc
      361 gattaccgcg accaattcga ccgccgggtg cttgtagatc gcttcctcaa ggacacgcgg
      421 atagacgttg aagccgctgc acagcagcat gtccttggtc cggtccacga tgaagacgaa
      481 cccgtcgctg tccatgtagc cgacgtcacc ggtgcgcagg aatccgtccg ccgtcgtgac
      541 gtcggccgtc gcgtcgggct tcttccagta acccttcatg acgttcggac ccttgatgca
      601 gatctcgccg cgttcgccgg gcggaacgta cctcgtgtcg tcctcgagac cgaggaactt
      661 gatgacgatg cccggcatcg gcatcccgca ggagccgagc ttgcgcatgc tgcccacctg
      721 ggccggggtg aaggttccgc tcggcgaggt ctcggtcatg ccccaaccct cgctcagatt
      781 gcagccggtg atcgcggtga attgctgcgc cacttcgagc ggtagcggcg cgccgccgga
      841 tccgcagtat ttgagcgtac ggaggctgtg cttcggcgtc tcgggatggt tgattagcgc
      901 cgtgaacatg gtcgggacgc cgcagaagac gctgatctgc ttgctcgaga tttcctcaag
      961 cgccgccttc ggatcgaagc gcacgtgctg gatgatctcc gctccgagga gaacgccgaa
     1021 cagcacgttc acggagagcg cgtagatgtg gaacggcggc agcaccgcaa gcatgcgctc
     1081 gctcccttcg accagcaccg gtggagaacc ggcggtcgtt gccttgtact gctgacacgc
     1141 gctggtcaga ttagcgtgcg tgagcatcgc gcccttgggc agtcccgtcg taccgccggt
     1201 atactggagc acggcaatgg tctcggccgg atcggcaacc ggatatgcct cgaaagcccc
     1261 gtcgttgtgg atcaactggc cgaagctgac atggcggtcg tcccaggcga cttcgcagag
     1321 ttgacgggcg gccttcattt ccgagatcac cgcatcggga tccgcggtta tctcggcgag
     1381 gctgccgaca accagcttct tcagccttgt cttgcccaac atcgccgcca tctgcggata
     1441 gagcgaagcc atatcaagcg tgatcaggat atcggtgcgg ctgtcctcga tcttgtgttc
     1501 gagaaccttg gcggcatcga gcggtgaata gttgacgacg gtcccgccag ccttgagcac
     1561 accgaaaaac gagatcacgt agtgcggcgt attgggcagg aacaagccga cgtgaacgcc
     1621 cggctttacc ccaagctgtt gcagtccgcg cgccgcacgg tcggccaggc gcccgagttc
     1681 gcggtagctg atccgcttgc ccataaagtc gatggcagga cgatccggcc aattggcgac
     1741 ggcgttgtcc aggatgctct gcaccgctcc gggcacgatc tcgacgtccc agcgcacgcc
     1801 ttcgggatag gatttgatcc aggccatgtc gttcatgagg tctctcactc tcctgtttat
     1861 cgtcgttcag accgccgtga ccccgccgtc caccgcgatg gtctggccgg tgatgaaggc
     1921 gcaggcgtcc gacgcgagca gcgctgccgc gcccttgagg tcttccgggc cgccgccacg
     1981 attcattgga gacatctgcg cggtcgcgcc ctgatcgagc tgcgcggtca tcttggtcgg
     2041 gaaatagccc ggcgcgatcg cgttgacgtt gatgccgagc ggcgcccatt cattggccag
     2101 cgtgcgggtc atgttcacga ccgcgccctt gctggcgttg taggcaatcg tgggcgtccc
     2161 atccggatag cagccggtca ggccctggat cgacgcgata ttaatgacct tgccggaccg
     2221 ccgcggcacc atgcagcggc gccccacctc ctgtgtgacg atgaagatcg ccgtcacatt
     2281 gaggttgatc accttgttcc agccctcgat cgtatgttcg atggtcggcg cgccccacga
     2341 cgtgccggca ttgttgacga ggatatcgat cggcccgagc gcagaaatga cccgctccac
     2401 catgggcgcg atcgtttcca gcctgctcat gtcgcagacc aagggcagcg cctcgatgcc
     2461 gagcgaattc agatgcttgg ccgccgcatc cagctcatcc tgcttccgcg cggtgatcgc
     2521 gaccttcgct ccgagttcac ccagcacctc ggcaatctgc agacccagtc ccctggatcc
     2581 gccggtgacg agcgccaccc gtcctttcaa atcctgcaac ttggctagac tcatggtttc
     2641 ctcgcgaaat agctgacgcg tcgaactgca tccagggtgg actgcttgct ctcttccata
     2701 ggcttcctcc gttcggtgtt gagttgtagc gacaaaagac ttctgtggcg gtctgcgtgt
     2761 tatcctcgca ttatccgggc ctgaaccgcg gaaatgccgc cgtccgcgcc acttgcttcg
     2821 atcgacgccg gatgcctcca agctcggatc gccgaccgtg cagctttatc tggggtcaac
     2881 gctatcgagc gcgcggaagc gttgaaaggt gcgattggcc cgcctgaccg gttagtttgg
     2941 gacatcgcgc ggcgtcgata gtcggcgatg cgggctgcga cgtcggatca ctacccgggc
     3001 attcaacaat tgcgccgccg acgcggtacc ctcagccgct gcggaaggcg gacggacttt
     3061 tccccgtcca ccgcgcgaat gcgtgacgga agtttgccgc atcgctatag ccgcgccggc
     3121 gctccagtgg ggagaacgct atcgcgcgcg tgccagatta ccgacctccc cccgggcgaa
     3181 aagtgcgagc gcgccgcttt ttgagtgaat tcgggacagg gctcaccgcc ccgattggtg
     3241 ctgggcgccg gcggcgcctc gaaagtcgga cgggctcttg ccggtccaac gcgtgaaggc
     3301 atgacggaaa ttcgcggctt cgctatagcc cagccggctg gcgatctcct cgttggtcat
     3361 ctgcgtcttg cgaagatact cgatcgcgag ccgcatgcgc acctccgcca gaagctcgcg
     3421 ataggaggtg ccttcggctt ccagcctgcg gcgcagtgca cgtggatgca tgttcagctg
     3481 cgacgcgatc gtctcgatgc ttggatacct gccgggctgt tcgatcagga gccgccgaat
     3541 atcggcggcg acaccccctg cacggttgac ctcgtcgagc aattgctcgc acatctccag
     3601 cgccatcgca tgggtccgcg catcggcaag agccgccggc ccgtcatcgc gatcatactc
     3661 atagccgcag ctccgctgcc caaacagcac ctggcactcg aacacgctct ggtaggcggc
     3721 ggcgtgcgct ggcggcgcat agtcgagcat gacgcgcgag aaggcgaacg ccgggctgac
     3781 gcgatcccga atcgtggtca ggtgtgccga cagcgcgaac tcgacagcaa aacaatgcac
     3841 gacctccgtc gggttcggcc agtgcagggg ctcgaacgcg acagcgactg ttccgccatc
     3901 gtaagtgtac gagaagtcgc agaacggacc aacgactcga acgtaacgcg cggcaaagct
     3961 gcgggcatcc gcctgggttg cgctgctcaa cagtgcgtag ccgtacattt cgtaggcggt
     4021 gacatgcata cgcaggcccg cccgcagcgc gatggccgga tcagccgata gacgcaacgc
     4081 atgacggcat cgagctgtcg gtacgatatc ttcgtcatgt gctgttcgag ctgcgccgta
     4141 ggtgaccgag taagcctcaa gcgcccgcgc attgcaatga tcgcgctgtg gacatgccgc
     4201 catttttaga tcaggatggc agcattcggc tccctcaact ttgtccccaa ctcacccggt
     4261 gagcggtcca atcgcacctt tctcaccaat gcaggttcgc tacgttccat gtaacggacg
     4321 cggccccgag cggcagcggg ccagatgcac gattggcatc acgcaacagc aagtccaggg
     4381 agctcgccga tgaagcgcga acaagtgctg aaccaattga cgacgccgat cggcgcgcca
     4441 gcctttccac gtggaccatt ccgcttcacc aatcgcgagt acctcaatat tctctatcgc
     4501 accgatatcg acgcgttgcg cgcggtcgtg cccgaaccgc tggagatcga tgatccgctg
     4561 gtgcgctggg aaatcatgcg catgcccgat acgtcgggcc ttggtgatta caccgaatgc
     4621 ggacaggtga tccaggtgcg cttcggtgag gaaaagggcg agtacctgca tgcgatgtat
     4681 ctcgacaacc tgccggcgct ggcgtcgggc cgcgaaatca gcgcttaccc gaaggtgatc
     4741 ggcaagccgc ggctgtacat cgactccgac accctggtcg gcaccatgga ctacggcagc
     4801 ttgcgcgtcg cgacggcgac catgggctac aagcaccgcg ccatggacct cgaggaagcc
     4861 aagcgcgaga tctgcgtgcc gaccttcatg ctgaagatcc tctggacgta cgacagcccc
     4921 aaacctggcg gcgagccgcg catctgcgag ctgttgcgaa ccgagatcac cgacatcacg
     4981 gtcaagggcg cctggactgg accggcacgg ctggagctgt tcgcccacgc gctggcaccg
     5041 atggccgatt tcccggtccg ggagatcgt
//
LOCUS       DATCWM010000530         3614 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_25476, whole genome shotgun sequence.
ACCESSION   DATCWM010000530 DATCWM010000000
VERSION     DATCWM010000530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3614
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25476"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            55..1464
                     /gene="cysS"
                     /locus_tag="VIQ50_10460"
     CDS             55..1464
                     /gene="cysS"
                     /locus_tag="VIQ50_10460"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012043602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEY9360847.1"
                     /translation="MELALYDTLTREKRPFTPLDPARVRMYVCGPTVYDFAHIGNARP
                     VIVFDVLFRLLRHLYGADHVVYVRNITDVDDKINARAAEEYPDLPLNQAIRRVTEQTD
                     KQFHEDVAALGCLPPTVEPRATEHIAEMRALIERLVTQGCAYVAAEHVLFRVGSMADY
                     GKLSKRSLEEMVAGARVEVAPYKRDPMDFVLWKPSKPGEPAWPSPCGIATPGRPGWHI
                     ECSAMAWKHLGETFDIHGGGIDLVFPHHENEIAQTRCAFHTPGMANVWMHNGFLQVEG
                     RKMAKSEGNFITISELLRSDNFGGRAWSGDVLRLAMLQTHYRQPIDWTVNGLELAFHT
                     LDDWFRAAAPSPNGPPNQGVVDALLDDLNTPRMIAELHAIRKQISRAQQGEAASELAN
                     TLSFLGFMQQNFFAWIAKMNDQVVGDSGRIDTLIDARNAARKTKDFKEADRIRDELHA
                     MGVELEDHKDGTTTWKVKR"
     gene            1464..1967
                     /locus_tag="VIQ50_10465"
     CDS             1464..1967
                     /locus_tag="VIQ50_10465"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY9360848.1"
                     /translation="MADAKPNPALRPFLPADAPLLAEIFRASIAELTGDDYSETQQEA
                     WAASADDAGAFAARLAGALTLLGTIDGSPVGFASLAETERVDMLYVHPAAARQGVGTM
                     LIDALEKLAAARGASRLTADVSDSAQDFFRRRGFVATQRNSIELGGEWLATTTMEKRL
                     AAKERAQ"
     gene            2108..>3614
                     /gene="cimA"
                     /locus_tag="VIQ50_10470"
     CDS             2108..>3614
                     /gene="cimA"
                     /locus_tag="VIQ50_10470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011927525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043714 - (R)-citramalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citramalate synthase"
                     /protein_id="HEY9360849.1"
                     /translation="MGLERLYLFDTTLRDGAQTNGVDFTLNDKLAIARMLDELGIDYI
                     EAGYPGANPTDTQLFAEERGLRATFTAFGMTRRPGRSTSNDPGLAALLEAKADAICFV
                     AKSWDYHVRVALETSAEENLASIRDSVRAAVRKKREVLLDCEHFFDGYKADARFALAC
                     AKTAYDEGARWVVLCDTNGGALPHEVEKIVGEVVKVIPGSHVGIHAHNDTEQAVANSL
                     AAVRAGARQIQGTLNGLGERCGNANLVSIIPTLKLKGEFAGRFEIGVSDAQLKTLAHA
                     SRTLDEMLNRAPNRHAAYVGESAFATKAGIHASAIMKEPTTYEHVPPETVGNQRKLLV
                     SDQAGKSNVLAELERIGLKVDREDPRIGRLLEVVKEREAIGYAYEAADASFELLARRV
                     LGKVPNYFDVEKFDVTVEQRDNALGQRVTVSLAVVKVKVDGEHLISAAEGNGPVNALD
                     LALRKDLGKYQSYISGLELTDYRVRILNGGTEAVTRVLIESTDELGERWTTI"
BASE COUNT          684 a         1153 c         1167 g          610 t
ORIGIN      
        1 gaggccgcgg cggccgtttt ccgtcgccga ggtacgggaa gagattgtgg tgcgatggag
       61 cttgccctct acgatacgct gacgcgggag aagcgcccct tcacgccgct cgatccggcg
      121 cgcgtgcgca tgtatgtgtg cgggccgacg gtctatgact tcgcccatat cggcaacgcc
      181 cgcccggtca tcgttttcga cgtcttgttc cgcctgctgc gccacctcta tggcgccgac
      241 catgtcgtct atgtgcgcaa catcaccgac gtggacgaca agatcaacgc gcgcgcggcg
      301 gaggaatatc cggatctgcc gctgaaccag gcgatccggc gggtgacgga gcagaccgac
      361 aagcagtttc acgaggacgt ggctgcgctc ggctgcttgc cgccgacggt cgagccgcgc
      421 gcgaccgagc atatcgcgga gatgagggcg ctgatcgagc gtctcgttac gcaagggtgc
      481 gcctatgtcg ccgccgagca cgttctgttt cgcgtcggct cgatggcgga ttacggaaag
      541 ctttccaaac gctcgctcga ggagatggtc gcgggagccc gcgtcgaggt cgcgccctat
      601 aagcgcgacc ccatggattt cgtgctgtgg aagccctcga agccgggcga accggcctgg
      661 ccctcgccgt gcggcatcgc gacgccgggc cggccgggct ggcacatcga gtgctcggcg
      721 atggcgtgga agcacctggg cgagacgttc gacattcacg gcggcggcat cgatctcgtc
      781 ttcccgcacc acgagaacga aatcgcgcag acgcgttgcg ccttccacac gccggggatg
      841 gcgaatgtct ggatgcacaa cggctttctg caggtcgaag gccgcaagat ggcgaagtcc
      901 gagggcaatt tcattacgat cagcgaattg ctgaggagcg ataacttcgg tggtcgagct
      961 tggtcggggg acgtgttacg gctcgcgatg ctgcaaactc actaccggca gcctatcgac
     1021 tggaccgtga atggactcga gttggctttt cacacgctcg atgattggtt ccgcgcagct
     1081 gctcccagtc cgaacggacc gccaaaccaa ggtgtcgtcg atgccctctt ggatgacttg
     1141 aacacaccta gaatgatcgc ggagttacat gccatcagaa aacaaatatc ccgcgctcag
     1201 cagggagagg ctgcgagcga gctagccaac acactttctt ttcttggttt tatgcaacag
     1261 aatttctttg catggatagc caagatgaat gatcaggtgg ttggtgattc cggccgcatt
     1321 gacacgctga tcgacgcacg caatgccgct cgcaaaacga aagactttaa agaagctgac
     1381 cgcatccgcg atgaactcca tgccatgggc gtcgaactcg aggatcacaa ggacggcacc
     1441 acgacatgga aggtgaagcg atgatggcgg acgcaaagcc taatccggcg ctgcggccgt
     1501 tcctgccagc ggacgcgccg ctgctcgcgg agatatttcg cgccagcatc gccgagctga
     1561 ccggcgatga ctacagcgaa acgcagcagg aggcctgggc ggcgagcgca gacgatgcgg
     1621 gcgccttcgc cgcgcgcctc gccggcgcgc tgacgttgct cggcaccatc gacggctcgc
     1681 cagtcggatt tgcttcgctt gccgaaacgg agcgcgtcga catgctttac gtccatcccg
     1741 ccgccgcgcg gcaaggtgtc ggcaccatgc tcatcgatgc gctggagaag ctcgccgccg
     1801 cccgcggcgc atcccgtttg accgccgacg tgagcgacag cgcgcaggat ttcttccgcc
     1861 gccgcggttt cgtggcgacg cagcgcaatt cgattgaact cggcggcgaa tggctggcca
     1921 ccacgaccat ggaaaagcgg cttgccgcca aggagcgcgc acaatgaaac ggctccggac
     1981 gccgcagggc ggcttgcagc gccaccacgt cgtgatggcg gtcgtcgcca tcgcggtcgc
     2041 gatcgcgctg gtgctgaact attatctgtg gtgagccatt cgtagtaagt catcatcgta
     2101 gtaagccatg ggtctcgaac gcctttacct cttcgacacc accttgcgcg acggcgcgca
     2161 gaccaacggt gtcgatttca cgctcaacga caagctcgcc atcgcgcgca tgctggacga
     2221 gctcggcatc gactatatcg aggccggcta tcctggcgcg aacccgaccg acacgcagct
     2281 gttcgcggaa gagcgcggat tgcgcgcgac cttcaccgcc ttcggcatga cgcgccgccc
     2341 cgggcgctcg acctcgaacg atcccggcct cgcggcgctg ctcgaggcca aagccgacgc
     2401 catctgcttc gtggcgaaat cctgggatta ccacgtgcgg gtcgcgctcg agacgagcgc
     2461 ggaggaaaac ctcgcctcga tccgcgacag cgtgcgcgcg gccgtgcgca agaaacgcga
     2521 ggtgctgctc gactgcgagc acttcttcga cgggtacaag gcggatgccc gcttcgcgct
     2581 cgcctgtgcc aagaccgcct acgacgaagg cgcgcgctgg gtggtgctct gcgacaccaa
     2641 cggcggcgcc ttgccgcacg aggtcgaaaa gatcgtcggc gaggtggtca aggtcatccc
     2701 cgggagccac gtcggcattc acgcccacaa cgataccgag caggcggtgg ccaattcgct
     2761 cgccgccgtg cgcgccggcg cccggcagat ccaaggcacc ctgaacgggc tcggtgagcg
     2821 ctgtggcaac gccaatctcg tgtccatcat tccgacactg aagctcaagg gcgaattcgc
     2881 cgggcgcttc gagatcggcg tgtcggacgc gcagctcaag accctggcgc atgcctcgcg
     2941 cacgctcgac gagatgctca accgcgcgcc caatcggcac gccgcctatg tcggggaaag
     3001 cgcgttcgcg accaaggccg gtattcacgc ctccgccatc atgaaagagc ccacgaccta
     3061 cgagcacgtg ccgcccgaga cggtcggcaa ccagcgcaag ctcctggtct cggatcaggc
     3121 gggcaagtcg aacgtgctcg ccgagctcga gcggatcggc ctcaaggtcg accgggaaga
     3181 tccccgcatc ggccggctgc tcgaggtggt gaaggagcgc gaggcaatcg gctatgccta
     3241 cgaggcggcg gacgcctcct tcgaactctt ggcgcggcgc gtgctcggca aggtgcccaa
     3301 ctatttcgac gtcgagaaat tcgacgtcac cgtcgagcag cgcgacaacg cgctcgggca
     3361 acgggtgacc gtgtcgttgg cggtcgtgaa ggtgaaagtc gacggcgagc atttgatttc
     3421 ggcggcggaa ggcaacgggc cggtcaacgc gctcgatctc gcgctgcgca aggacttggg
     3481 caagtaccag agttatatca gcgggctcga gctcaccgac taccgcgtgc gtatcctcaa
     3541 cggcggcacc gaggcggtca cccgcgtgct gatcgagagc accgacgagc tcggcgagcg
     3601 ctggaccacg atcg
//
LOCUS       DATCWM010000531         3878 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_516896, whole genome shotgun sequence.
ACCESSION   DATCWM010000531 DATCWM010000000
VERSION     DATCWM010000531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3878)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3878)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3878
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_516896"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..222
                     /locus_tag="VIQ50_10475"
     CDS             <1..222
                     /locus_tag="VIQ50_10475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2497 domain-containing protein"
                     /protein_id="HEY9360850.1"
                     /translation="EERGLLSAATTAAVDAAFEALARTAQARNGRTLEEVVSELLRPM
                     LKTWLDDNLPAIVERLVRAEIERLSRGRE"
     gene            complement(398..793)
                     /locus_tag="VIQ50_10480"
     CDS             complement(398..793)
                     /locus_tag="VIQ50_10480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360851.1"
                     /translation="MPRINQQALKTELAKRGFESISIKRELPDGRVEVEANKLHPVHV
                     EKGEAIYAPVPVSLSIKLDARGQVKSIEGDTPKPAAVADAARYMKTLRDSGQLAASGE
                     AAPARGVTHQIERDAQGRHVLRRKRFSMY"
     gene            complement(857..2377)
                     /locus_tag="VIQ50_10485"
     CDS             complement(857..2377)
                     /locus_tag="VIQ50_10485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360852.1"
                     /translation="MAKKRSKRAAKKSAARTGRRKARAVSTERGAQPKGVINGWEDDP
                     GAGNQPSGGQVVQRPVPVLRDQPFPTRIVNPSSAPAAKPHPPGTAEFRYWAAAEALRR
                     GADFWGALVPGIPWEVGAILPVDLDFGVDLNAFYDREGLKFFHGSAAGRTVFSGESPD
                     IVCHELGHALLDSFKPQLFDAASIEVAAFHESFGDMSAILSALQLSSVREGVLAETGG
                     VLHRSSRLSRLAEQLGWAIRQSVPSAVEPDCLRNAMNTFFYRDPDTLPTTAPATSLSS
                     EPHSFSRVFTGAFFEGLAGMLGTTASRDEAALLQVSQDIGAILVQGIRAASVVPTFMS
                     QVAASMLAVAAARFSAQGYEAPLRSGFIRHGILPPSMAVAATHAPARIAALAASPSES
                     KTLPTLQLSVAEYGLGVPSIVVYAAAEPKRLQVAGAALAVGAAPSPGEDQAAKSFFED
                     LLRRGRLKIPGPAKGAAETVRAAAPQTHETHTHELRREGKHMVLRRIRIDCGLAHH"
     gene            complement(2591..3793)
                     /locus_tag="VIQ50_10490"
     CDS             complement(2591..3793)
                     /locus_tag="VIQ50_10490"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9360853.1"
                     /translation="MPTRSIILLAGAGFASQAMVRVTDSLLPQIAADFGTTVGAASIV
                     VAAYAVSHGSIQLVIGPVGDRFGKYRTVAVMCALASILVALCGTVQSLSALAVARFAS
                     GAAAGWIIPLSMAYVGDVTPYERRQPILGRYLTGQISGQLFGQAAGGVLGDLFGWRNV
                     FFVLAAMFALATAGLVFELLVNPRTRAVRHSAETTPGFRAGYRALFSNPWARLVILAV
                     FIEASIAWGAFAYVGADLHLRFGLSFGAIGLIVGTFGVGGLLYAACVSLLVNRLGQAG
                     LAMFGGVLLGLAYLTLAIGAHWWLAPIAVTAIGLGFYALHNTLQTNATQMTPQARGTA
                     VAIFSSAIYFGQTLGVAAGALVFDRFTAVPLFAATAVALPALAWWFARKLRKHAIHTE
                     AKTKSARA"
BASE COUNT          685 a         1285 c         1287 g          621 t
ORIGIN      
        1 gaggagcgcg gcctgctctc tgccgcgacc accgccgcag ttgatgccgc tttcgaggcg
       61 ctggcgcgca cggcgcaggc gcgcaacggt cgtaccctcg aggaggtggt cagcgaactg
      121 ctgcggccga tgctcaagac ctggctcgac gacaatctgc cagcgatcgt cgagcgcctg
      181 gtgcgcgccg agatcgaacg gctctcgcgc ggacgggagt gagcggcggc agcaatcgcg
      241 cgcgctttgt ccggctcaca agtatgactt tgtcatggcc ggggttgtcc cggccatcca
      301 cgtcttgggt aacttataag aaagacgtgg atgcccgcga cacaagcgcg ttcacgtgcg
      361 tcttccgacg cgctatgcgc gggtatgacg attcagttca atacatcgag aagcgcttgc
      421 gccgcaggac gtgccggcct tgtgcatcgc gctcgatttg atgagtgact ccacgcgccg
      481 gcgcggcttc tccggaggca gcgagctgcc cgctgtcgcg cagcgtcttc atgtagcgcg
      541 cggcatcggc gacagcagcc ggcttcggag tgtcgccctc gatcgacttc acctggccgc
      601 gcgcgtcaag cttgatcgat aacgacaccg gcacgggcgc gtaaatggcc tcgccttttt
      661 cgacgtgcac ggggtgaagc ttgttggcct cgacctcgac tcggccgtcc ggcaactcgc
      721 gtttgatcga gatcgactcg aagccgcgct tggcaagctc cgtctttagc gcctgttggt
      781 tgatgcgcgg cattggtcag ccatgtgcgg cccccgaatt tccgccgcgc atcatacagg
      841 tgccgaaccc ccgcgctcaa tggtgagcga gcccgcagtc gatacgaatg cggcgaagca
      901 ccatgtgttt tccttcccgc cgcaactcgt gggtatgcgt ctcgtgggtc tgcggcgccg
      961 cggcacgtac ggtctcggcc gctcccttgg cggggccagg gatcttgagc cgcccgcgcc
     1021 gcagcaagtc ctcgaagaag gacttggccg cttgatcctc gcccggcgag ggcgccgcgc
     1081 cgacggcgag cgccgcgccg gcgacctgca ggcgctttgg ttccgcggcg gcatagacga
     1141 cgatcgacgg gacgccgagg ccatactcgg ccacggaaag ttgcagcgtc ggcagcgttt
     1201 tcgattcgct cgggcttgct gcaagggctg cgatgcgcgc gggcgcatgc gtcgccgcca
     1261 ccgccatcga aggcggcaga atgccgtggc ggatgaaccc gctccgcagc ggcgcttcat
     1321 agccttgcgc ggagaatcgt gccgccgcga cagcgagcat gctggcggcc acttgactca
     1381 tgaaggtcgg cacgacggat gcggcgcgaa tgccctggac cagaatcgcg ccgatatctt
     1441 ggctcacttg cagcagcgcg gcttcgtctc tcgaggccgt cgtgcccagc atgccggcca
     1501 gtccttcgaa gaacgcgccg gtgaagacgc gcgagaagga gtgcggctcc gagctcagcg
     1561 acgttgccgg tgcggtggtg ggaagcgtgt cgggatcccg gtagaagaac gtattcatcg
     1621 cgttccgcag acagtcgggc tcgaccgccg acggaaccga ttgacggatg gcccagccga
     1681 gctgttccgc caggcgtgag agccgcgacg agcggtgcag cacaccaccg gtttccgcta
     1741 aaactccctc gcgcacgctc gacagctgca gcgccgacag aatcgcgctc atgtcgccga
     1801 aggattcgtg gaacgcggcg acctcgatgc tcgccgcgtc gaacagctgc ggcttgaacg
     1861 agtcgagaag cgcatgcccg agctcatggc acacgatgtc ggggctctcg ccggaaaaga
     1921 ccgtgcgtcc ggcggccgaa ccatggaaga acttgagccc ctcgcggtcg tagaacgcgt
     1981 tgagatcgac gccgaaatcg aggtccacgg gcaggatcgc gcccacttcc cacggtatcc
     2041 cagggaccaa tgctccccag aaatcggcgc cgcgccgcag tgcttcggca gccgcccagt
     2101 agcgaaactc cgcggtcccc ggcggatgcg gcttcgccgc cggcgcagag gacgggttga
     2161 cgatccgggt cgggaacggc tgatccctca gaaccggaac gggtctttgg acgacttgac
     2221 ctccgctcgg ttggttgccc gcgccgggat cgtcctccca accattgatc actcccttcg
     2281 gctgcgcccc gcgttcggta gagaccgcgc gtgccttgcg cctgccggtg cgcgcagccg
     2341 acttcttcgc ggcgcgcttg gatcgcttct tggccatggc atctctccat tgctgcatcg
     2401 ccgacgtgac acaccggcga ggcgagctcg ccgaggtggc ggccttgcca ttatcctccg
     2461 gtcacgggcg atgccgaggt gagatagatc acgttcctat gaactgatcg tcgttgtgcc
     2521 ggcaaggcac cagcgtcagc gcagctgtca taaatgcaat cgcgtgacga cctcagcgcc
     2581 agcgccagtc ttacgctcgc gcgctcttcg tcttcgcttc ggtgtggatc gcatgtttcc
     2641 gaagttttct cgcgaaccac cacgccaaag caggcagcgc gactgcggtt gccgcaaaca
     2701 acggcacggc cgtgaagcgg tcgaacacga gcgcgcccgc cgcgacgccg agcgtctggc
     2761 cgaaatagat tgccgacgag aagatcgcga ccgccgtgcc gcgcgcttgc ggcgtcattt
     2821 gcgtggcgtt ggtctgcagc gtgttgtgga gcgcatagaa gccgagcccg atcgcggtga
     2881 ccgcgatggg cgcgagccac cagtgcgcgc cgatcgccag ggtcagatag gcgagaccca
     2941 gaagcacgcc gccgaacatc gcaagtccgg cttgtcccag ccggttgacc agcagcgaca
     3001 cgcaggcggc ataaaggagc ccgccgacgc cgaacgtgcc gacgatcagc ccgatcgcgc
     3061 cgaacgaaag cccgaagcgt agatgcagat ccgcgccgac ataggcgaag gcgccccagg
     3121 cgatgctcgc ctcgatgaac accgcgagga tgacgagccg tgcccacgga ttcgagaaga
     3181 gggcgcggta accggccctg aatcccggcg tggtttcggc cgagtggcgg accgcgcgag
     3241 tgcgcgggtt gacgagaagc tcgaagacca gcccagcggt cgcgagcgcg aacatggccg
     3301 cgagcacgaa gaacacgttg cgccaaccga acaggtcgcc gagcacgccg ccggccgctt
     3361 ggccgaagag ctggccggaa atctgtcccg tgagatagcg ccccaggatc ggttggcgac
     3421 gctcgtaggg cgtcacgtct ccgacatagg ccatcgagag cggaatgatc catccggccg
     3481 ccgcacccga agcgaagcgc gcaacggcga gggccgacag cgattgcacc gtgccgcaca
     3541 gcgccaccag gatcgaggcg agcgcgcaca tcaccgcgac cgtgcgatac ttgccgaacc
     3601 ggtctccgac cggtccgatg acgagctgga tcgagccgtg gctcacggca taggcagcga
     3661 cgacgatcga ggccgctccc accgtggtcc cgaaatcggc cgcgatctgc ggcaggagcg
     3721 agtcggtgac ccgcaccatc gcctggctcg cgaaccccgc gcccgccaac aggattatgg
     3781 agcgcgtcgg cacgccctgg gctgacggcg agctcatact agtggcgcgg attgtctgtt
     3841 catcatgccc ggcacgcagt taagcttgcg cagactgc
//
LOCUS       DATCWM010000532         2309 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_290141, whole genome shotgun sequence.
ACCESSION   DATCWM010000532 DATCWM010000000
VERSION     DATCWM010000532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2309
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_290141"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            149..841
                     /locus_tag="VIQ50_10495"
     CDS             149..841
                     /locus_tag="VIQ50_10495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016842935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY9360854.1"
                     /translation="MTTEVSVVLTHGAWADGSSWARVITPLKAETVKVFAAPLPLTSL
                     ADDVAALNRSLDRTEGPIVLAGHAYAGAVIALARSERVKALVYVTALAPDEGEKVADV
                     FYRLAPHPQAPRLAPDNNGLVWLPEEAFAAAFAPHASTEDQAVLYAVQRPISLNCITV
                     PVGRPLWKDIPSWFLVAEDDRMIVPETQRYMAERMKAKTKVHAVDHTPSVTAPGVVVE
                     IIRDAMRSVTGN"
     gene            1337..1822
                     /locus_tag="VIQ50_10500"
     CDS             1337..1822
                     /locus_tag="VIQ50_10500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012109662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RT0821/Lpp0805 family surface protein"
                     /protein_id="HEY9360855.1"
                     /translation="MSVVRLIAAACVATSLTACAGTPETGQGPKENTGTLVGALAGGL
                     IGSQFGGGTAERIAAGIGGAAIGGLIGNRIGAGMDDDDKRRAYAAQMQALEAGKSGVA
                     VAWKNPDSGRYGSVVPGPAYESNGLQCRPYTHTIYIDGRPQVARGNACRNPDGTWTAV
                     G"
BASE COUNT          444 a          694 c          721 g          450 t
ORIGIN      
        1 gtcgcacgat tgcccattcg aagcgcaaag gttccaatcg cataaccgga tcaagcgggt
       61 cgttgacaag ttatgacctg ctacataacc tgataatcat cactttacag gttatgcgct
      121 gtcgacccgt gatgccagga gcaacaggat gacgacggaa gtgagcgtcg tgcttaccca
      181 tggagcctgg gcggatggat caagttgggc acgggtcatt acgccgctca aggcagagac
      241 cgtgaaagtg ttcgcggcgc cgcttcccct gacatctctt gctgacgacg tggctgccct
      301 taaccgcagt ttggaccgga ccgaagggcc gattgtgttg gcgggacacg cctacgccgg
      361 tgcggtcata gctctcgcac gttctgaacg cgtgaaggcc ctagtctatg taaccgctct
      421 tgcccccgat gaaggcgaga aggtcgcaga cgtgttctat cgccttgccc cccatcccca
      481 agcgcccagg ctggcaccag acaataatgg cttggtttgg ctgcctgaag aagcctttgc
      541 ggccgcgttc gcgccgcatg catccaccga ggatcaagcc gtgctctacg ccgtgcagcg
      601 accaatctcg ctgaactgca tcacggttcc agtcgggcgc ccgctttgga aggacattcc
      661 gagttggttt ctcgttgccg aggatgatcg aatgatagtt cccgagacgc agcgctacat
      721 ggcggaacgc atgaaagcga aaacgaaggt gcatgccgtc gatcacacac ccagcgtcac
      781 cgctccaggc gttgtggtcg agattatccg cgatgcaatg cgctccgtaa ccggtaactg
      841 aggcaggtct cacagcggat tattgctgct ttcacagata actgctttaa tgcaattata
      901 agggttacaa gttcgaacgc atggcaatga aatcgcgggt gcgtccgcga tttctatcgc
      961 gttccaaatg agaatccgtc ggccctcccg gctgcgccgg ccgatggagg tgcaccgctc
     1021 acacctcgaa aggagtagtc ttatgagtga cgttcatcat atcggccgcc gccccatcct
     1081 tgccgggatc ggggccgccg cgctcgtcac ctctttcgaa ggccgtcgcg gaccagatca
     1141 tcgcacgaaa tgggtaagaa atacccttgg ccgctcaatg ccgccgtgcg cgtaggtttg
     1201 ccagcatagg ccgttgaatt tgcggcgatg ttttattttt gccctaattt tggccactag
     1261 ttaaagggtc ggcatcggca ttgggggacg ccggcccgtt caaaatgctg aacggatcag
     1321 ctgggggctc gcgctaatgt ctgtcgttcg cctgattgct gccgcgtgcg tcgcgacgtc
     1381 gcttacggcg tgcgctggta cgcctgagac cggccaagga ccgaaggaaa acacgggcac
     1441 gctcgtcggc gcgctggcag gcggcctgat cggctcgcag ttcggcggcg gaaccgccga
     1501 gcgcatcgcc gcggggatcg ggggcgccgc gatcggcggg ctcatcggca atcgcatcgg
     1561 cgccggcatg gatgacgacg acaagcggcg cgcctatgcg gcgcaaatgc aagcgctcga
     1621 agccggaaaa tcgggtgtgg cggtggcgtg gaagaacccc gactcgggtc gctatggatc
     1681 ggttgttccc ggtcccgctt atgagtcgaa cggactgcaa tgccggccgt acacgcacac
     1741 gatctatatc gacggccgtc cgcaggtcgc gcgcggcaac gcttgccgca acccggacgg
     1801 gacctggacc gccgtgggct gatcgcaggc gccatcgcgg cgcctcagcc ctggcggcgt
     1861 tgaccggaat cgccgaggtc agcgcgcatg cgggcgtagc ctcggcaacg cagcgacaca
     1921 gccgagccga atgtgcatga tcgcctgagg cggggcgctg caatcgcaag cgagccatga
     1981 tctgcgccga gcttgaggcc cgcccatgcg cggtgaatgg ctgcaaatgc gcggccaccg
     2041 ccggtgatgc ggaacctcgg cggaatctac acaagttacg acaaatttac gcaagttctg
     2101 cgtacgcccg cttccccatg tcgcgggcgc cagggtgttt cggcattgca agcgggctgt
     2161 tcggcatgat gtaaccacgc cggacgtgcc cgggatcgac ggcactccct tttcgccgca
     2221 tcgcctcggc aatgttacat tcgactcggc ggattgactt atgaccctgt ggttcggtgt
     2281 cgcactcatg acagccgcgg cggtttggg
//
LOCUS       DATCWM010000533         3218 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_284613, whole genome shotgun sequence.
ACCESSION   DATCWM010000533 DATCWM010000000
VERSION     DATCWM010000533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3218)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3218)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3218
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_284613"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(202..888)
                     /locus_tag="VIQ50_10505"
     CDS             complement(202..888)
                     /locus_tag="VIQ50_10505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RraA family protein"
                     /protein_id="HEY9360856.1"
                     /translation="MTAPSRAQLEFLQSIDTPTVCNLVEIVAPERRGFGYTVRHLHCP
                     FPELPPIVGFAKTVTFKAKGAVPLGEAGYMQKRLDYLDYVAGSPRPSIMVMEDLDGEH
                     VGYGAFWGEVQSNVHKALGCLGVVTNGSIRDIPAIAPDFQMLAGSIVPSHAYVHVVDF
                     GIDVTVHGMAVKSGDLIHADRHGAVVVPTDKIEAMQATLGAVSAREAKIIAAAKAGGD
                     VAAIKAAMKG"
     gene            complement(921..2078)
                     /locus_tag="VIQ50_10510"
     CDS             complement(921..2078)
                     /locus_tag="VIQ50_10510"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9360857.1"
                     /translation="MAVDPRKIAVAIAGFCTFLNLYSPQALLPALAGEFGVGAAEIST
                     IMTASTLAIALTAPFTGAIADVLGRKRVIAAAMLAVVVPTIGAAFAPDVQALVVLRFI
                     QGLLLPPIFAVTVAYIGDEWPPAQVAGVAGIYIAGSSLGGFCGRFLPGLLSDLISWRA
                     AFLALAGLSFVGALALALLLPQEKGFVRSPGLTASARGMLRHLRNPQLLATYGIGFGV
                     LFNFIAVFTYVSFHLAAPPYRFSSTLLGLIFVTYLAGTVIAPMTGWMVARLGRRRFIL
                     ALIAGWAGGALLTLLPPIPAIIAGLTLCAGCGMLCQTIATGYVTQIAKEGRSSAVGLY
                     VTSFYAGGSMGAFLPGLVWDWGGWPATIALVVTMLAAMALIATLAYRRATA"
     gene            complement(2116..>3218)
                     /locus_tag="VIQ50_10515"
     CDS             complement(2116..>3218)
                     /locus_tag="VIQ50_10515"
                     /inference="COORDINATES: protein motif:HMM:NF025052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY9360858.1"
                     /translation="AKPVEAGPWIAALADYIEQNDTAFRDMAEFFPAAEAATLARRSR
                     AAHSRIRPLLRERGERGLIRHLHGDLHLGNIVLLGGRPVPFDAIEFSPLIASGDVLYD
                     LAFLLMDLVERGLNPAANRVLNRYLTETKRAEDLDALATLPLFLSLRAAIRAKVTAAR
                     IDHAAPDQRAAIARSARTYFEFARRFIEPGMPRLVAVGGLSGTGKSALAQALAGELAP
                     DPGAVVLRSDVERKALFGKDEHERLPQDAYSPAVTARVYAIITDKARRAVAAGHSAIL
                     DAVFATRPERAAAAASAEIFGVAFYGLFLEADLDTRLARLSARGRDPSDADAAVARMQ
                     QSYDLGALDWTRIDASGPPDETLARARKAVNP"
BASE COUNT          601 a         1038 c         1077 g          502 t
ORIGIN      
        1 gccgccgttg cagtcgacct catgccaata cctcacctcg aggcggtaaa gagcatgcca
       61 aaggctggcc tcctcgcgcg cgtccatgct gagcctccct atggtgtcgg catgcctatg
      121 cgaaaaaact cgcagaaggc aaaccctcgt cccaacgccg acacccggcc tccggttgcc
      181 atcgcgcgcg gcggcgcgcc tttagccctt catcgccgcc ttgatcgccg cgacgtcgcc
      241 gcccgccttc gccgccgcga tgatctttgc ttcgcgcgca gaaaccgcgc cgagcgttgc
      301 ctgcatggct tcgatcttgt cggtcgggac cacgaccgcg ccgtggcggt cggcatggat
      361 gaggtctccg ctcttgaccg ccataccatg cacggtcacg tcgatgccga aatcgaccac
      421 gtgcacataa gcgtgggagg gaacgatcga gccggccagc atctggaagt ccggcgcgat
      481 cgccgggatg tcgcggatcg acccgttggt gaccacgccg agacagccga gcgccttgtg
      541 cacgttcgac tggacctcgc cccagaacgc gccatacccg acgtgctcgc catcgaggtc
      601 ttccatgacc atgatgcttg gccgcggcga gccggcgacg tagtcgaggt agtcaagccg
      661 cttctgcata tagccggcct cgccgagcgg gacggcgccc ttcgctttga aggtcacggt
      721 cttggcgaag ccgacgatgg gtggaagttc gggaaaggga caatgcaggt gtctgacggt
      781 atagccgaag ccgcggcgct ccggcgcaac gatctcaacc aagttgcaca cggttggggt
      841 gtcgatcgat tgcagaaatt cgagttgggc tcggcttggc gcggtcattc atgttcccct
      901 ttgggcgtga aaaagcgaac ctaggccgtc gcgcggcgat aagcgagcgt tgcaatcaag
      961 gccatggccg ccagcatcgt caccaccaag gcgatcgttg ccggccatcc gccccagtcc
     1021 cagacgagcc ccggtaggaa cgcccccatg ctgccgccgg catagaacga cgtcacgtag
     1081 agcccgacgg ctgacgagcg tccttccttc gcgatttggg tgacatatcc ggtcgcgatc
     1141 gtctggcaca gcatgccgca tccggcgcaa agggtaagcc ccgcgatgat ggctggaatt
     1201 ggcggcagca acgttagaag cgcaccgccc gcccagccgg caatcagcgc aagaatgaag
     1261 cgccgacgtc cgaggcgcgc caccatccag ccggtcatcg gcgcgatcac ggtgccggcg
     1321 agataggtga cgaagatcag cccgagcaag gtcgaggaaa agcgataggg cggcgcggcg
     1381 aggtggaagc tcacgtaggt gaatacggcg atgaagttga agagcacgcc gaatccgatg
     1441 ccgtaggtgg cgagcagttg cggattcctc aaatgccgca acatccctcg tgcagacgcg
     1501 gtaaggccgg gcgagcgaac aaaacccttc tcctgcggca gcaacagcgc gagtgcgagc
     1561 gcgcccacga acgacaagcc cgcaagcgcc aagaaggcgg cgcgccagct gatgagatcg
     1621 ctgagcagac ctgggaggaa gcggccgcag aacccgccga gactggatcc cgcgatgtag
     1681 atgccggcaa cgcccgccac ctgcgccggc ggccactcgt cgccaatata ggcgacggtg
     1741 acggcgaaga tcggcggtaa cagcagtccc tggatgaagc gcaaaacaac gagcgcctgc
     1801 acgtccggcg cgaacgccgc gccgatcgtg ggcacgacca ccgccagcat cgccgcggcg
     1861 attacgcgct tgcgcccgag cacgtcggca atggcgccgg tgaacggcgc ggtcaaggca
     1921 atggcgagcg tgcttgcggt catgatcgtg ctgatttccg cggcgccgac gccgaactcc
     1981 cccgccagcg ccggcaacag cgcctgcggc gaatagaggt tgaggaaggt gcaaaagccg
     2041 gcgatggcga cggcgatttt gcggggatcg acggccattg cgtttaggtt gccttgcaga
     2101 ccggggcagt ccttctcatg ggtttactgc cttgcgcgct cgcgcgaggg tttcatccgg
     2161 cgggccggag gcatcgatgc gcgtccagtc gagggcgccg aggtcgtagc tctgctgcat
     2221 tcgggcgacc gccgcgtcgg catcggaggg atcgcggccg cgcgcgctca ggcgtgcgag
     2281 gcgggtgtcg agatcggcct cgaggaaaag tccgtaaaaa gcaacgccga agatttcggc
     2341 cgatgccgct gccgcagcgc gctccggtcg ggttgcgaaa accgcgtcga ggatggcgga
     2401 atggcccgcc gccaccgccc ggcgcgcctt gtcggtgatg attgcataaa ccctcgccgt
     2461 cactgccggc gaataggcat cctgcggcag ccgctcgtgc tcgtccttgc cgaacagcgc
     2521 cttacgctcc acgtccgagc gcaacaccac tgctccggga tcaggggcga gctctcccgc
     2581 gagcgcttgg gcgagcgccg atttgcccgt gccggacagc cctccgaccg cgacgaggcg
     2641 cggcatgccg ggttcgatga accggcgcgc aaattcgaaa tatgtgcgcg cgctgcgcgc
     2701 gatcgcggcc ctctgatcgg gagcggcatg gtcgatccgc gccgcggtca ctttggcgcg
     2761 gatcgcggcg cgcagcgaca ggaagagcgg cagcgttgcg agcgcgtcga gatcttcggc
     2821 ccgcttcgtt tcggtgagat aacggttcag cacgcgattc gctgccgggt tcagaccgcg
     2881 ttcgaccaaa tccatgagta ggaaggcgag atcgtagagc acgtctcccg atgcgatgag
     2941 tgggctgaat tcgatagcat cgaacggaac cggccgcccg ccgaggagga cgatattgcc
     3001 gagatgcagg tcgccatgca gatgccgtat cagcccgcgc tcgccgcgct cgcgaaggag
     3061 cggacggatg cgggagtgcg cggcgcggct acgccgcgcc agtgttgcgg cctccgcagc
     3121 gggaaaaaac tccgccatgt cgcgaaatgc ggtgtcgttc tgctcgatat agtcggcaag
     3181 cgccgcgatc catggcccgg cttcgaccgg cttggcgc
//
LOCUS       DATCWM010000534         7898 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_155111, whole genome shotgun sequence.
ACCESSION   DATCWM010000534 DATCWM010000000
VERSION     DATCWM010000534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7898
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155111"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1669)
                     /gene="treZ"
                     /locus_tag="VIQ50_10520"
     CDS             complement(<1..1669)
                     /gene="treZ"
                     /locus_tag="VIQ50_10520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malto-oligosyltrehalose trehalohydrolase"
                     /protein_id="HEY9360859.1"
                     /translation="MTASARFGAEVERGGATFRLWAPAAKRVEVMLDRIYPMQARPEG
                     WYEVMIPHAGAGTLYKYRIDGELEIPDPASHFQPQDVFGPSEVVDHDRFEWRTNEWRG
                     RPWEHAAILELHVGTFTPGGTFRGAIDKLDHLREAGLTAIELMPIADFAGRRNWGYDG
                     VLLYAPDSVYGRPDDLRMLIDEAHARGLMVFLDVVYNHFGPEGNHLHRYAPAFFASAH
                     TPWGHAIDYRVPQVRAFAIENALHWLKRYRFDGLRLDAVHMLLETGQPSVLHDLSRAV
                     GDFAAATGRLIHLVLENDDNRASLLDPLTNPPHGKYRAQWNDDYHHAWHRLLTGEAGG
                     YYEDYGPDPRRHLARVLGSGFAYQGEPSPHRHDCTRGEASGSLSPLAFVNFLQNHDQI
                     GNRPLGDRLSAHASEAAMTAALAITLLAPMPPLLFMGEEWGSTCPFPFFCDFQGALAD
                     AVRKGRREEFKAAYAEFAHAIPDPLEEATSRMAMLDWGAPASPSGRKRLALVRDLLAI
                     RRREIVPRLADASFAATELEACVLIADWSLGDGDTLRLLANLSGGEAN"
     gene            complement(1666..3738)
                     /gene="glgX"
                     /locus_tag="VIQ50_10525"
     CDS             complement(1666..3738)
                     /gene="glgX"
                     /locus_tag="VIQ50_10525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004133 - glycogen debranching enzyme
                     activity [Evidence IEA];
                     GO_process: GO:0005980 - glycogen catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HEY9360860.1"
                     /translation="MRISAGAPHPLGATWDGRGTNFALFSANAEKVELCLFDSYGRRE
                     IERIALPERTEDVWHGYLADVVPGQLYGYRVHGPYHPERGLRFNSHKLLIDPYAKQLV
                     GRLVWSDAHFGYRAGSARADLSFDRRDNARGMPKSMVVDEAFTWGEERRPSIPWQDTI
                     IYEAHVKGLTQLREDVPPAWRGTYRGLTAPAVVNHLKRLGVTTVELLPIHAFIDDRHL
                     IERSLSNYWGYNTVGFFAPEARYAVDAPLDAFRSTVSRLHDAGIEVILDVVYNHTAEG
                     NHLGPTLSFRGIDNPSYYWLLPDQPRYYADFTGCGNALNLTHPGVLQMVMDSLRYWVQ
                     VCHVDGFRFDLASTLGRGPNGFDGGVGFFAAVRQDPILARVKLIAEPWDLGLGGCRVG
                     GFPLGWSEWNDRFRRTLRRYWSGEGNLIGELGRRMTGSADLFDHDNRSPRSSVNFVTV
                     HDGFTLADLVSYERKHNEANGEDNRDGSDENDSTNFGVEGPTDDANILALRRQTRRNQ
                     LASLMLAQGVPLMLAGDEIGNSQGGNNNAYCQDNPIGWVDWSVLGNDDDDMTSLLSEL
                     NGLRRRFSQLRARRWVEGRRPDGSFGVLWLTPHATEMTEQDWNFPEGRFLSYVLGPVQ
                     QTDAPLYIVLNAAPQTIEFMLPALAEYSRWTPCLQTAREPQLGGELPAGSKAHAPPRS
                     ILVFSGSP"
     gene            complement(3740..5896)
                     /gene="glgB"
                     /locus_tag="VIQ50_10530"
     CDS             complement(3740..5896)
                     /gene="glgB"
                     /locus_tag="VIQ50_10530"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008141016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003844 - 1,4-alpha-glucan branching
                     enzyme activity [Evidence IEA];
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0043169 - cation binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching protein GlgB"
                     /protein_id="HEY9360861.1"
                     /translation="MRSLTPEAYAVIEGRHSDPFRYLGPHLENGASVVRVFLPDAEEV
                     AVIDDEGHERDLKRIHDAGLFEGRLGNGPRHYRLRARYGDRQVEIEDPYRFPPVLSDF
                     DLYLLGEGTHMHPYEKLGAHPMVLDGVEGVAFAVFAPAAKRVSVVGDFNFWDGRRHAM
                     RVRGNGFWEIFVPEAKPGTRYKYEIVGPDGRLLPLKSDPLAFAAELRPQTASIIVDQN
                     TIPRPQRSPPGVNALSAPISIYEVHLGSWRRHPRHKGRWLNYRELAEQLPAYAHDMGF
                     THVEFLPVSEHPFDGSWGYQPTGLFAPTSRFGTPADFAALIEECHRKGLAVILDWVPG
                     HFPDDPHGLARFDGTALYEHENPKQGRHLDWNTLVYNYGRTEVANFLLGSGLFWLDRY
                     SVDGLRVDAVASMLYLDYSRPEGGWIPNKYGGRENIDAINLLRRINSELFSRFPNATT
                     AAEESTDWPMVSRPVDWGGLGFGYKWNMGWMHDTLEYISKDPIYRKHHHGQILFGLHY
                     AFFENFILPLSHDEVVHGKRSILGRMPGDKWQRFANLRAYYGFMFGHPGKKLLFMGNE
                     FGQENEWRHDHSLDWHLLEQPPHAGVQALVRDLNRLYRTIPALHELDCEDAGFEWLVM
                     HDADRGVFAWLRKGRQTQERCLVVVNFTPEIYRDYRIRVPFSGMWREILNTDSALYGG
                     GNIGNAGAVRTLDEGTIPEVSLVVPPLAAIFLVPER"
     gene            complement(5893..>7898)
                     /locus_tag="VIQ50_10535"
     CDS             complement(5893..>7898)
                     /locus_tag="VIQ50_10535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_process: GO:0000023 - maltose metabolic process
                     [Evidence IEA];
                     GO_process: GO:0005991 - trehalose metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="putative maltokinase"
                     /protein_id="HEY9360862.1"
                     /translation="RLYLPMIMDPVYGYEAVNVEAQSRSLASLLSWTKRLISVRKSSK
                     VFGRGSLSFIRPANRSVLVYVRQYESEVVLCVANLSRSAQAAEIDLAPWRGRVPFELL
                     GRTNFPPIGDNPYLVTLGPYGFFWLLLREPDASVEAPRTWAEFETLVVTDGWRSLLDG
                     RSKSVLERDVLPAFLASRRWYAERGSWPTTHILGALPLGAADAELGMVLLEAKGRRET
                     ANYLLPLTIKWTRFDPEQENPNALAAVRRGPREGSLLDAMADARFATLLLENLRAARS
                     IEADHRRLEFSPTGRFTDEGTLAVQDVHAVDTEQSNTTVLVGADYVIKLFRRLEPGLN
                     PEIEVGRFLTETVSFPHIPPLLGSVEIEQDGARSAVAVVHGFVQNQGDAWTVTNAYLD
                     RFVEEQRLLTAEAAGHSDEQAAYLRRMEQVGRRVAELQIALASRDDIVDFAPAPIAAE
                     DVRSWTEELLRRARRTFEDLARRRSEFSEHDRQLVDALLAYRETLPARLRELLPENVA
                     AMKIRHHGDFHLGQMLIVKDDVAIIDFEGEPRRSIEDRRRKAPAARDVAGLMRSIDYS
                     ATAALERALKSAPDEHGKLARALEGWREHSAAAFIAAYRSTLTDARLWPQSVEAADSL
                     LDFFLLEKAFYEIEYELAHRPDWLRVPLAGTWRILSRSEGTAQ"
BASE COUNT         1504 a         2484 c         2537 g         1373 t
ORIGIN      
        1 ggttcgcctc gccgccggag aggttggcga gcagcctcag cgtatcaccg tcgccgagcg
       61 accaatcggc gatcaggacg caagcctcca attccgtcgc agcgaagctt gcgtcggcaa
      121 gtcgcggcac gatctctcgc cgccgaatcg cgagcagatc gcgcaccagc gcgagccgct
      181 tgcggccgct cggggacgcg ggagcgcccc aatcgagcat ggccatacgg gacgttgctt
      241 cctcaagcgg gtccggaatc gcgtgcgcga actcggcgta ggcggccttg aattcctcgc
      301 gccgcccttt gcgcaccgcg tccgcgagcg ccccctggaa atcgcaaaag aagggaaacg
      361 gacaggttga tccccattcc tcgcccatga acaggagcgg cggcatcggg gcaagcagcg
      421 tgatcgcaag cgctgccgtc atcgcagcct cgctcgcgtg cgcggagagg cgatcaccta
      481 acggacggtt gccgatctgg tcgtggttct gcagaaaatt gacgaaagcg agcggcgaca
      541 agctgcccga cgcttctccg cgagtacaat cgtgccgatg cggtgagggc tcgccctgat
      601 aagcaaatcc cgagcccaac acgcgcgcga gatgccggcg cggatccggg ccgtaatcct
      661 catagtagcc gcccgcctca cccgtcagca gcctatgcca cgcgtggtga tagtcgtcgt
      721 tccattgcgc gcggtatttt ccgtgcggcg gattggtcaa gggatcgagc aagctcgcgc
      781 ggttgtcgtc attctccagc acgaggtgga tcaaccgtcc ggtggcggcg gcgaaatccc
      841 cgaccgctcg actgaggtca tgcagcaccg acggctgccc cgtttccaag agcatgtgga
      901 ccgcgtcgag ccgaaggccg tcgaaacgat agcgcttgag ccaatgcagc gcattttcga
      961 tcgcaaaggc gcggacctgc gggacgcgat agtcgatggc gtgcccccac ggcgtgtgtg
     1021 cgctggcgaa gaatgccggc gcatatcggt gcagatggtt accttccggg ccgaaatggt
     1081 tgtagaccac atcgagaaag accatgagcc cgcgggcatg cgcctcgtcg atcagcatgc
     1141 gcagatcgtc aggccgccca taaacgctgt cgggagcata gagcaggacg ccgtcatagc
     1201 cccagtttcg ccggccggcg aagtcggcga tcggcatcag ttcgatcgcg gtcagtccgg
     1261 cctcacgcag gtgatccagc ttgtcgatgg caccgcggaa cgtgccaccg ggcgtgaacg
     1321 tgccgacgtg aagctccaag atcgccgcat gctcccaggg ccgccctcgc cattcgtttg
     1381 tccgccactc gaatcgatcg tgatcgacga cttcgctcgg cccgaacaca tcctgcggct
     1441 ggaagtgcga ggccggatct ggaatctcca gttctccgtc gatgcggtac ttatagagcg
     1501 tgccggcgcc cgcatgcggt atcatgactt cgtaccagcc ttccggccgt gcctgcatgg
     1561 gatagatgcg atccagcatc acctcgacgc gtttggcggc cggagcccag aggcggaagg
     1621 tggctccgcc tcgctcgacc tcggcgccga agcgcgcgct ggcggtcatg gggagcccga
     1681 aaacaccaga atggaccgcg gcggcgcgtg cgccttcgag ccggccggaa gctccccgcc
     1741 cagctgcggt tcccgcgcgg tttgcaggca cggggtccag cggctgtatt cggcaagcgc
     1801 aggaagcatg aactcgatag tctgcggcgc ggcgttgagc acgatataga gcggcgcgtc
     1861 cgtttgctgg accggtccga ggacgtagga caggaagcgt ccttccggaa aattccaatc
     1921 ctgctccgtc atctcggtcg cgtgcggggt caaccacaac acgccgaagg agccgtcggg
     1981 gcggcggcct tcgacccaac gccgggcgcg caactgggaa aatctgcggc gcagtccgtt
     2041 gagctcgctc agcaaggatg tcatgtcgtc gtcgtcgttg ccaagcacgg accaatccac
     2101 ccatccgatc ggattgtcct gacagtaagc gttgttgttg ccgccctggc tgttgcctat
     2161 ttcgtctccg gcgagcatca agggcacgcc ctgcgccaac atcaggctcg caagctgatt
     2221 gcgacgcgtc tgccgcctca gcgcaaggat gttcgcatcg tcggtcggtc cttcgacgcc
     2281 gaaattcgta ctgtcgttct catcggagcc gtcgcgattg tcctcgccgt ttgcttcgtt
     2341 gtgcttgcgc tcgtagctga ccagatccgc gagggtgaac ccgtcgtgaa cggtgacgaa
     2401 attgacgctc gagcgaggcg aacggttgtc gtgatcgaac agatcggcgg agccagtcat
     2461 gcggcgcccg agctcgccga tgagattgcc ttcgccggac caataacggc gcagcgtgcg
     2521 gcggaagcgg tcgttccatt ccgaccagcc caaaggaaag ccgccgacac gacagccgcc
     2581 gaggccgaga tcccatggtt cggcgatcag tttgacccgc gccagaatcg ggtcctggcg
     2641 gacggccgcg aagaagccca cgccaccatc aaatccattg ggaccgcggc caagcgtgct
     2701 ggcgagatcg aagcgaaatc cgtcgacgtg gcaaacctgc acccagtacc gcagcgaatc
     2761 catgaccatc tgcagcacgc ccggatgggt gagattgagt gcgttgccgc aacccgtgaa
     2821 gtcggcgtaa tagcggggct gatccgggag cagccaataa tacgaggggt tgtcgatacc
     2881 gcggaagctc agagtcggac cgaggtgatt gccttcggcg gtatggttgt agacaacgtc
     2941 gaggatgacc tcgatgccgg cgtcatgcaa tcgcgacacc gtcgatcgaa acgcatcgag
     3001 cggcgcgtcg acggcgtaac gtgcctcggg agcaaagaag ccaacggtat tgtagcccca
     3061 gtagttgctc aggctgcgct cgattagatg ccggtcgtcg ataaaggcgt ggatcggcag
     3121 caattcgaca gtggtgacgc caagccgctt gagatgattg acgacggcgg gagcagtcaa
     3181 gccgcgatac gtgccgcgcc aggcgggcgg cacatcctcg cgaagctgcg tcaggccttt
     3241 gacgtgggct tcatagatga tcgtgtcttg ccacggaatt gaaggcctgc gttcctcgcc
     3301 ccacgtgaag gcttcgtcga caaccatgct cttgggcatg ccgcgcgcgt tgtcgcgccg
     3361 gtcgaacgag agatcggccc gggcgctacc ggcgcgatag ccgaaatggg cgtcgctcca
     3421 aacgaggcgg ccgacgagct gcttcgcata ggggtcgatg aggagcttgt gcgaattgaa
     3481 gcgcaggcca cgctccgggt gatacggccc gtgaacgcgg tagccgtaga gttggccggg
     3541 aacaacatcg gcgaggtagc cgtgccagac atcctcggta cgctcgggca acgcgatgcg
     3601 ctcgatctcc cgccggccat agctgtcaaa caggcaaagc tcgaccttct ccgcgttcgc
     3661 cgaaaacagc gcgaaattcg ttccgcgtcc gtcccaggta gcccccaacg gatgcggcgc
     3721 accggccgaa atccgcatgc taccgctccg gaacgagaaa aattgcagca aggggcggaa
     3781 caacaaggct gacctcgggg atagtgcctt cgtccaacgt cctgaccgcg cccgcgttcc
     3841 cgatgttgcc gccgccgtac aacgcggaat cagtgttgag gatttcgcgc cacatgcctg
     3901 agaacggaac cctgatgcgg tagtcgcggt aaatctcggg ggtgaagttc accaccacca
     3961 ggcagcgctc ctgcgtttgg cgtcccttgc gcagccaggc gaacacgccg cggtcggcat
     4021 catgcatgac cagccattcg aatccggcat cctcgcaatc gagttcgtgc agggccggta
     4081 tcgtgcggta aagccgattg agatcgcgga ccaatgcctg gacgccggcg tgagggggct
     4141 gctcgagaag atgccaatcg agcgaatggt catggcgcca ctcgttttct tggccgaact
     4201 cgttgcccat gaacaggagc ttcttgccgg gatgcccgaa catgaacccg taataggcgc
     4261 gcaggttggc aaagcgctgc cacttatcgc ccggcatgcg accgagaatc gaccgcttgc
     4321 cgtgcacgac ctcgtcatgc gagagcggca ggatgaagtt ctcgaaaaac gcgtagtgca
     4381 agccgaacag aatttgcccg tgatgatgct tgcggtagat cgggtccttg ctgatgtatt
     4441 cgagcgtatc gtgcatccaa cccatgttcc acttatagcc aaatccgagg ccgccccagt
     4501 ccaccggccg cgacaccatg ggccaatcgg tcgattcctc cgccgcggtc gtcgcattgg
     4561 gaaatcgtga gaacagctca gaattgattc ggcgcaacag gttgatggcg tcgatgtttt
     4621 cgcgcccgcc gtatttgttg gggatccagc caccttccgg ccggctgtaa tcaaggtaca
     4681 acatggaggc cacggcatcg acacgcaggc catcgacgct gtagcgatcg agccagaaca
     4741 gcccactgcc cagcaggaag tttgcgacct cggtgcgccc gtaattgtag accagcgtat
     4801 tccagtcgag gtggcgcccc tgcttgggat tttcatgctc atagagcgcg gtgccgtcga
     4861 agcgagcaag gccgtgcgga tcgtcgggga agtgtcccgg cacccaatcc agaatgacgg
     4921 cgagtccctt gcggtggcat tcctcgatca aggcggcgaa atcggccgga gtgccgaagc
     4981 gactggtcgg cgcaaaaagt ccggtcggct gatagcccca ggatccatcg aagggatgct
     5041 cgctgaccgg caggaattcg acgtgggtga agcccatatc gtgtgcgtaa gccggcaatt
     5101 gctctgccag ctcgcgataa ttgagccaac gccctttgtg tcgcggatgc cgccgccacg
     5161 atccgagatg cacttcgtag atcgatatcg gcgcgctcaa cgcgttgacc ccgggaggag
     5221 agcgctgcgg gcgcggtatc gtgttctggt cgacgatgat cgaagcggtc tgcgggcgca
     5281 actcggcggc gaatgccaag gggtcggatt tcaacggcaa caagcggccg tcgggcccga
     5341 caatctcgta tttgtacctg gtcccgggct tagcctcggg gacaaagatt tcccagaagc
     5401 cgttgccgcg cacgcgcatg gcatggcgcc ggccgtccca aaaattgaaa tcgccgacga
     5461 cgctgacccg cttggccgcg ggcgcgaaga ccgcaaacgc gacgccttcc accccgtcga
     5521 gcaccatggg atgagcgccg agcttctcgt aaggatgcat gtgcgtgcct tcccccagca
     5581 ggtacagatc gaaatcggac aagaccgggg ggaagcggta agggtcttcg atctcgactt
     5641 gccggtcgcc gtagcgcgcg cgcaggcggt agtgccgcgg tccattgccc aggcgaccct
     5701 cgaacagccc ggcatcgtgg atgcgcttga gatcgcgctc atggccttca tcatcgatga
     5761 ccgcgacctc ctcggcatcg ggaaggaaga cccgaaccac tgatgcgccg ttttccaggt
     5821 gcgggccgag gtagcggaat ggatcggaat gacgaccctc gatgacggca taggcttccg
     5881 gcgtgagcga tctcattgcg cggtgccctc cgaacgcgaa aggatgcgcc aggtgccagc
     5941 cagcggcacc cgcagccaat ccgggcgatg cgcgagctcg tattcgattt cgtagaacgc
     6001 cttctccaat aaaaagaaat cgagaagact gtcggcggcc tcgaccgatt gcggccacag
     6061 cctcgcgtcg gtcaaggtcg accgatatgc cgctatgaac gcggcagcgg agtgctcgcg
     6121 ccaaccttcg agcgcgcggg cgagtttgcc gtgctcatcg ggcgccgact tgagcgcacg
     6181 ctcgagcgcc gccgtcgcgg aatagtcgat cgaccgcatg agtccagcca cgtcgcgcgc
     6241 ggcgggagcc ttgcgccggc ggtcctcgat gctgcggcgc ggctcgccct cgaaatcgat
     6301 gatcgccacg tcatccttga cgatcagcat ctgcccgaga tgaaagtcgc cgtgatggcg
     6361 gatcttcatt gctgcgacgt tttccggcag cagttcgcgc aagcgtgcgg ggagcgtctc
     6421 tcggtacgcc aaaagcgcgt cgaccagctg ccgatcatgc tccgaaaatt ccgatcgacg
     6481 gcgcgccaga tcttcgaacg tccggcgcgc gcgccgcaac agctcttccg tccaggatcg
     6541 cacatcctcg gcagcgatgg gtgccggggc gaagtcaacg atgtcatccc ggctggcaag
     6601 cgcgatctgc aactctgcca cgcgacgccc gacttgctcc atccgccgca gataggcggc
     6661 ctgctcgtcg ctgtgtccgg ccgcttcggc cgtaagcagg cgctgttcct cgacgaaacg
     6721 gtcgagatag gcgttcgtta ccgtccaggc gtcgccctgg ttttgcacga agccgtgcac
     6781 gaccgcgacc gcgctgcgag cgccgtcctg ctcgatctcc acgcttccga gcagcggcgg
     6841 gatgtgcggg aacgaaaccg tctccgtcag gaaccggccg acctcgattt ccgggttgag
     6901 accgggctcg agacggcgaa agagcttgat cacgtagtct gccccgacca ggaccgtcgt
     6961 gttggattgc tcggtgtcca cggcgtgcac gtcctgcaca gcgagcgtcc cttcgtccgt
     7021 aaatctcccc gtcggggaaa actcgaggcg tcgatggtca gcctctatgc tccgcgcagc
     7081 gcgcaagttt tccaggagga gcgtggcaaa gcgcgcatcc gccatggcgt cgagcaggct
     7141 gccctcgcgc ggcccgcgtc gcacggccgc caacgcgttt ggattttctt gctcgggatc
     7201 gaagcgcgtc catttgatgg tcagcggcag caggtaattg gcggtttcgc gcctgccttt
     7261 ggcctcgagg agcaccatgc cgagctcggc atccgcagca ccgagcggta gggcgccgag
     7321 gatatgggtc gtcggccaac tgccgcgctc ggcgtaccag cgccggctgg caaggaacgc
     7381 cggaagaacg tcgcgctcga gcaccgattt ggagcgcccg tccagcaacg acctccaccc
     7441 gtcggtgacg acgagcgtct cgaattccgc ccaggtccgc ggcgcctcga cggatgcgtc
     7501 cggctcgcgc agcaggagcc agaagaaacc atatggtccg agcgtcacaa ggtaggggtt
     7561 gtcgccgatc ggcggaaagt tggttcgccc gagcagctcg aacggcacac ggccgcgcca
     7621 gggggcaagg tcgatctcgg cggcttgtgc cgagcgcgac aggttggcga cgcagagcac
     7681 gacttcactt tcgtactggc gtacatagac gaggaccgag cggtttgccg gccggatgaa
     7741 gctgagcgag ccacggccga acaccttgct cgatttgcgc accgagatca ggcgtttggt
     7801 ccagctcagc agcgatgcta ggctgcgcga ctgcgcctcg acgttgaccg cctcgtaacc
     7861 gtagaccggg tccatgatca tcggcaggta cagccgcg
//
LOCUS       DATCWM010000535         4385 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_295548, whole genome shotgun sequence.
ACCESSION   DATCWM010000535 DATCWM010000000
VERSION     DATCWM010000535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4385)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4385)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4385
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_295548"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..256
                     /locus_tag="VIQ50_10540"
     CDS             <1..256
                     /locus_tag="VIQ50_10540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360863.1"
                     /translation="ADCAVEAGMLAREQSELPRLEVASPADRPPYCITLETVMGFANR
                     VRTHVAHCPSSDFAMTAADWSRKRHDYAQLFSRYRCKRTR"
     gene            complement(309..1004)
                     /locus_tag="VIQ50_10545"
     CDS             complement(309..1004)
                     /locus_tag="VIQ50_10545"
                     /inference="COORDINATES: protein motif:HMM:NF012783.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease proteolytic subunit"
                     /protein_id="HEY9360864.1"
                     /translation="MRFEWRREGPAETCGANCRVWISAVGYITADTPREFETFAKDPN
                     VHGAVLVLDSDGGSVLGTLTLGRAIRSLDMITTIGRTTALARAGNGERRATLSPEGSC
                     ESMCAFLLLAGARRYVPPEAHVLVHQIWLGKKRKQALESNYSAEELNIVQRDIGRLVQ
                     YTMEMGGSGELLETALRIPPWEPLYRLSADELRRMKLTTAEALFEPEVAGSPPRKSTT
                     SLVTVGQPAVPRD"
     gene            1321..1650
                     /gene="yidD"
                     /locus_tag="VIQ50_10550"
     CDS             1321..1650
                     /gene="yidD"
                     /locus_tag="VIQ50_10550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HEY9360865.1"
                     /translation="MVHYLAGVPSLLARGLINVYRHGFSALTGFSCRHLPTCSDYAEE
                     AIGRFGLWAGGWMTLARLCRCHPFGTRGLDFVATSLPDGARWYLPWRYGRWRGTNCSP
                     EVAPPRV"
     gene            1828..3759
                     /gene="thrS"
                     /locus_tag="VIQ50_10555"
                     /pseudo
     CDS             1828..3759
                     /gene="thrS"
                     /locus_tag="VIQ50_10555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715316.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
     gene            complement(4204..>4385)
                     /locus_tag="VIQ50_10560"
     CDS             complement(4204..>4385)
                     /locus_tag="VIQ50_10560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360866.1"
                     /translation="TAAPLVPSGDLPGRERYRFTPSPLDRFMQPSPRVEPLLRWDCGP
                     RRRSRGKRRSSQSRC"
BASE COUNT          825 a         1405 c         1359 g          796 t
ORIGIN      
        1 agccgattgc gccgtcgaag ccggcatgct cgccagggag caatcggagc tgccgcgcct
       61 cgaggtcgcc tccccggccg accgtccgcc gtactgcatc acgctggaga ccgtgatggg
      121 gttcgccaat cgcgtgcgga cgcacgtcgc ccactgccca agttcggatt tcgccatgac
      181 cgcggccgat tggagcagaa agcgccacga ctacgcgcag ctgttcagcc gctaccggtg
      241 caagcggacc cggtaaattg ctcacgctct ccggcgaggt cgccgcgcgc ccacgcggaa
      301 cggataccct aatcccgcgg gacagcaggc tggccgaccg tcaccagcga tgtcgtcgat
      361 ttccgcggcg gcgatccagc aacctcgggc tcgaacagcg cctcggcggt cgtgagcttc
      421 atgcgacgca gttcgtccgc ggaaagccga tacaacggct cccacggcgg aatccgcaac
      481 gccgtttcca gcaactcgcc gctgccgccc atttccatgg tgtattgcac caggcggccg
      541 atgtcgcgct ggacgatgtt gagttcctcg gccgaatagt tcgactccag cgcctgcttg
      601 cgctttttgc cgagccagat ttggtgaacg agcacatgcg cctccggcgg cacgtagcgg
      661 cgtgccccgg caagcagcag gaaagcgcac atcgactcgc agctgccttc gggcgatagc
      721 gtcgcgcgac gctcgccgtt gccagcccgc gccaacgccg tcgtcctgcc gatggtggtg
      781 atcatatcga ggcttcgaat ggcgcggcca agcgtcaacg tgcccaacac cgagccgccg
      841 tccgagtcga gaaccaggac tgctccgtga acattcggat ctttggcgaa cgtctcgaac
      901 tcgcgcgggg tgtcggcggt gatataaccg acggcggaaa tccacacgcg acaattcgct
      961 ccgcatgtct ccgccggtcc ctcgcgcctc cactcgaagc gcatcggggc gctcccgctg
     1021 tcgtcctggg ggggtgtggg tggcgcggag gatgcttgga cgattccgca aacaagcgcg
     1081 aatgcgctcc agaagagtcg gagcatgctg accctcatcg atagcgcttc gcgcgacgct
     1141 tcttgttcga cgtcggtcga agacgcccag tgccctcagt ttagccgccc cctttttaga
     1201 ggcggcggag attcgggtct agtccgaaaa cgcatggcct accgcaccgc ctcgactatg
     1261 ttacgggggt accgagatag ggttcgtgga accggcatga gcgggcaagg ccgtgtgcgc
     1321 atggtgcact atcttgcggg cgttcccagc cttctcgcgc gtgggttgat caacgtctat
     1381 cgccacggct tttccgcgct gaccggtttc agctgccggc atctgccgac ctgctcggat
     1441 tatgccgagg aggcgatcgg ccggttcggt ctgtgggccg gcggctggat gacgctcgcg
     1501 cggctctgcc gctgtcatcc gtttggcacg cgcgggctcg acttcgtggc gacatcgttg
     1561 cctgatggcg cgcgctggta tctgccttgg cgctacggcc gttggcgcgg caccaattgc
     1621 agccccgagg ttgcgccgcc gcgcgtctga gactggcacg cgattttgcc ggcaagcacg
     1681 ccgcgttgcg cgctctatac acatcgtata atcgtgcttt gccgcttcgg agtgcggcgg
     1741 cgccccccgg accgacgcca tatccaagcc cgtccggcca cgcttacctg cagtcgtagg
     1801 cagcgagtga gcaacaggag cgacgcggtg gtcgcgctga ccttccccga tggcgcgcgt
     1861 cgagaatacc caaaagggtc gactggtctc gacattgcca agcaaatctc gccgtcgctc
     1921 gccaagcgca cggttgccat ggcgctcgac ggcgtccttg cggacttgag cgatccgatc
     1981 gagcgggacg cgaaaatcga attcctcacc cgcgacgacc cgcgcgccct ggggctgatc
     2041 cgtcacgatg ccgcgcatgt gctcgccgag gcggtgcaaa cgctgtggcc cggcacccag
     2101 gtcactatcg gccctgtgat cgagaacggc ttttattacg acttcttccg caaccagccg
     2161 ttcaccccgg aagatttcgg catcatcgag aagaagatgc gcgaaatcgt cgcccgcgac
     2221 aaacccttca gcaaagaggt ctggacgcgc gagcacgcca agcgcgtgtt ccgcgacaag
     2281 ggtgagctgt tcaaggtcga gctcatcgac gccatcccgg aagaccaaga gatcaagatt
     2341 tatcggcaag gcgactggtt cgacctttgc cgtggcccgc acatgacgtc gaccgggaag
     2401 gtgggcaacg cgttcaagct gatgaaggtc gcaggcgcct attggcgcgg cgattccaac
     2461 cgcgagatgc tcagccgcat ctacggcacc gcctttacta agcaggagga gctcgacgcc
     2521 taccttaagc aactcgaaga ggtggagaag cgcgaccatc gccggctcgg ccgcgagatg
     2581 gacctctttc acttccagga agaggcgccg ggctcggtgt tctggcatcc gaagggctgg
     2641 acgctctatc agatgctcga aagctacatc cgccgccgcc agacggcggc cggctacgtc
     2701 gaagtcaact cgccgcagct catggattcc tcgctttggg ttgcctccgg ccatatggcg
     2761 accttccgcg aaaatatgtt tctcacccag ccgcgcgaag atgacgagcg cacgttcgtg
     2821 gtcaagccga tgaactgccc gggccacatc cagattttca agaacggcct gaaatcctac
     2881 cgcgacttgc cgctcaagct tgccgaattc ggcaaggtgc accgcttcga gccgtcgggc
     2941 gcgctgcacg ggttgatgcg ggtgcgcgcc ttcacgcagg atgatgcgca cgtgttcatc
     3001 accgaagggc agattgcagc cgaagccctc gccatgaacg atctgatcct ctcgatctac
     3061 gaagatttcg gcttccccga cgtcacgatc aaattctccg accgccccga caagcgcatc
     3121 ggtgatgacg cggtgtggga cagatccgag gccgcgttga tgcaggcgct caagacctcc
     3181 gggcgcccgt ggaccctcaa caagggcgag ggcgccttct atgggccaaa gctcgaatac
     3241 gtactgcgcg acgccatagg tcgcgactgg cagtgcggca ccgtgcaggt cgatcttaac
     3301 atgcccggtc gtctcggcgc cttctatatc gacgagcact cgaacaaggt gacgccggtg
     3361 atgctccatc gcgccatgtt cggctcgctc gagcgcttca tcgggattct catcgagcac
     3421 cacggtggcc atctgcccct ttggctctcc ccgttgcagg cggtcgtcgc caccatcacc
     3481 gatgacgccg atgcttacgc acgcgatgtc accgccgccg cgcagcgcgc ggggctgcgg
     3541 gtcgaggccg acctgcggaa cgagaaaatc aattacaagg tgcgcgagca ctcgctcgcc
     3601 aagatgccgg cgttgctcgt ggtcggccgc aaggaagcag ccgaccgcac cgtttctatc
     3661 cgccgtctcg gagacgaggg acagaccgtg ctggcgcttg atgtggcgct gaagtcgctc
     3721 gccgaggagg ccgtgccgcc ggacgtgcgg cggttgaggc aggcgggtaa ccgggcaact
     3781 atcgcaaagc ttggagagat tgaaattgat gttcggtcag catcggtagg tcaaatacat
     3841 gacgccatag atcatctacg taagaccgat ttcgtatccg caattaccct tgccagcgcg
     3901 gcagagggaa ttctgccgca caccgacaag cctcacttgt tcccaaaact aaaaggcttg
     3961 ggcacctctc ttccagcgga cccgaacggg actacggatg ttaatgcctt taccaattgg
     4021 gccaaacatg ggacccataa aaaggcgacc atctctgaac tcgaagtcgt ggctacaatc
     4081 attcgcgcaa tttcgaaatt tacggctgtc tatggcgagc aatcgccaca gatgaacgaa
     4141 ttttcggaat gggcgaggtc gcgcttagaa gccgaccaaa attcaaatta ggatgacttg
     4201 tggtcaacag cggctttggc tcgatctccg cttgccccgc gatcgccggc gcggcccgca
     4261 gtcccagcgc aagagcggct cgacgcgcgg gctaggctgc atgaagcggt cgagcggcga
     4321 aggggtgaaa cggtagcgct cgcggccggg cagatcgccc gatggcacga gcggtgcggc
     4381 ggtgg
//
LOCUS       DATCWM010000536         4375 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_290186, whole genome shotgun sequence.
ACCESSION   DATCWM010000536 DATCWM010000000
VERSION     DATCWM010000536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4375)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4375)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4375
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_290186"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            251..1876
                     /locus_tag="VIQ50_10565"
     CDS             251..1876
                     /locus_tag="VIQ50_10565"
                     /inference="COORDINATES: protein motif:HMM:NF024842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY9360867.1"
                     /translation="MTRNLERSYDGIIIGAGHHGLILGCYLARSGLKVLLVERRLDYG
                     GGLSTREVTKPGFYHNLHSINHFHIGHTPWFADLELADKVTYITPRYEFGQAHKDGTA
                     LVFGRDLEETVINVARFSKKDAVVFREWNRKAEEVTRRVLIPERYSEPLPQAERERLL
                     SMTTVGRDFLEIARRQPLDVVDELFENEHVKLLFLFKVSLFGTWLTDTLSKTSPMGSV
                     IRAFDLDSGYQLCQGGSFNLARGLMETFIASSGTYQPQVDIDRVVIEGGRATGIALVD
                     GRIVRAGRFVASTLDVHQTFEKLVGRNQMPRVLLEKLDGFRYTGWTLFGLHLALEESP
                     RFSAETFDPNINRTLKWSIGAETMQDLFSAFEDVKVGRVPRIVQFGSGPLSLLDPTQA
                     PPGKHTTYAWHVMPLNPDLGGRDHETFKDEFSDAILETWSRYCPNMTAKNVIQRYAYT
                     AQEYTAEFPNMRNGDIFMGAFNAEQVMYNHFGYRTPIPNLYLSGSSGHPGGAISGGAG
                     YITAGIIARDLGAKLWWKPWSAEEALSSIARAA"
     gene            1878..2672
                     /locus_tag="VIQ50_10570"
     CDS             1878..2672
                     /locus_tag="VIQ50_10570"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006339967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEY9360868.1"
                     /translation="MSIDPISIDRAARPSLDGRVAIVTGAGQGIGRVFAKALAKAGAA
                     VAILERNAPGADRVASEIAQDGGQAVAIETDVSEERAVSAAVEHTVSRFGSADILVNN
                     AAIFSTLEMRPFDRIPPQEWERVLRVNVTGPFLCACAVLPYMRKRGHGRIINIASGAV
                     TLGRPNYLHYIASKGALEGMTRSMARELGADGITVNAILPGATFTEIARKTVTAEQKR
                     AIVAMQCVPRPQVPEDLVGALLFLAGDSSSFMTGQALTIDGGATHR"
     gene            complement(3077..4042)
                     /locus_tag="VIQ50_10575"
     CDS             complement(3077..4042)
                     /locus_tag="VIQ50_10575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011471993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM44-like domain-containing protein"
                     /protein_id="HEY9360869.1"
                     /translation="MLRFHAHPLLALCALLAVLAFATSDADARAGRGGGFGSRGSQTF
                     STPPSTTTTPTARPIERSMTQPGQPGGAFAQRPPISSPVGGFFNRPGFFGGLFAGFLG
                     AGLLGMLFGQGFLGGLGGAASLIGLMLQIGIIAIIGYLVWTWWQRRSQPALASGPALR
                     DYAPGNSRSAMGFGLGGGAPPSSARASGTDEVGLTPDDFNAFEKTLGEVQSAYSAEDL
                     ARLRRHVTPELLSYFSEELAANASKGVVNRVSDVKLQQGDLAEAWREGDTDYATVAMR
                     FSLNDETLDRDSGRVLQGGPDEATEIWTFMRVRGGHWLASAIQQS"
BASE COUNT          821 a         1383 c         1388 g          783 t
ORIGIN      
        1 tgtcacgctc acgctcgccg gccattgtcc ccgcagagga catcgtggag ttcatgctgg
       61 acggcaagcc ggtcgaccag atgggacggg cgatgtatgc tgaacggccg atccatggtg
      121 aggccctatc gagcgcggcc ggacgtggga tgcgtcgcgc accaccatgg cgagctcttg
      181 cgcaccgacc tcgcaaccaa ccgcgcatgg gactattagg cggcgcgcgc cggctttcag
      241 ggaatgtgat gtgacgagga acctagaacg cagctacgac gggatcatca tcggcgcggg
      301 ccatcacggc ctgatccttg ggtgttatct cgccaggtcc ggcttgaagg tgctgttggt
      361 cgagcgccgg ctcgattacg gcggcggcct ttcgacacgt gaggtcacga agcccggctt
      421 ctaccacaac ctgcattcga tcaatcactt tcatatcgga cacacgccgt ggtttgcgga
      481 tctcgagctc gctgacaaag tcacctacat cacgccacgc tacgagttcg gccaggccca
      541 taaggacggc accgcgctag tgttcggacg cgatctggaa gagaccgtca tcaatgtcgc
      601 gcggttctcg aagaaggacg cggtggtatt ccgcgagtgg aacaggaaag ccgaggaggt
      661 tacgcgccgc gtgcttattc ccgagcgcta ttccgagccg ctcccacagg ctgaacgcga
      721 acggctgctc tcgatgacga cggtcggccg cgacttcctg gagatcgcgc ggcgccagcc
      781 gctcgatgtg gtggatgagc tgttcgagaa cgagcacgtc aagcttctct tcctcttcaa
      841 ggtctcgctg ttcggcacct ggctgaccga caccctgtcc aaaaccagtc cgatgggctc
      901 ggttattcgc gccttcgact tggacagcgg ctatcagctc tgccagggcg gctcgttcaa
      961 cttggctcgt ggtctgatgg agaccttcat cgcgtcgagc ggcacctacc agccgcaggt
     1021 cgatatcgat cgcgtcgtca tcgaaggcgg ccgcgccacg ggcatcgcgc ttgtcgacgg
     1081 ccggattgtg cgcgccggaa ggtttgtggc gagcacgctc gatgtgcacc agactttcga
     1141 aaaactggtt gggcgcaatc agatgccgcg agtcctgctc gaaaaactcg acggcttccg
     1201 ctacaccggt tggacgctgt ttgggctgca tctggccctc gaggagagcc cgcggttttc
     1261 ggccgagact ttcgatccca acatcaatcg cacgctcaaa tggagcatcg gcgcggagac
     1321 catgcaggat ctgttctcgg ccttcgagga cgtcaaggtc ggccgcgtgc cacggatcgt
     1381 gcaattcggg tctgggccgc tcagcctcct cgatccgacg caagcgcccc cgggcaagca
     1441 cacgacttat gcctggcatg taatgccgct caacccggat cttggcgggc gcgaccacga
     1501 gactttcaag gacgagttct cggacgccat tctcgagacc tggtcgcgtt attgcccgaa
     1561 catgacggcg aagaatgtca tccagcgcta tgcctacacc gcgcaggaat acacggcgga
     1621 attccccaat atgcgcaatg gcgacatctt catgggtgcg ttcaacgccg aacaggtcat
     1681 gtacaaccat ttcggatacc gcacccccat tcccaatttg tatctgtcgg gatcctcggg
     1741 ccacccgggc ggcgcgattt caggcggcgc tggctacatc accgctggga tcatcgcgcg
     1801 cgaccttggc gctaagctgt ggtggaagcc ctggagtgca gaagaggcgc tgtcctcgat
     1861 cgcacgggcg gcgtgacatg agcatcgatc cgatctcgat tgatcgggca gcgcgaccct
     1921 cgctcgacgg gcgcgtcgca atcgtgaccg gcgccggtca gggcatcggc cgcgtgtttg
     1981 ccaaggcgct tgcgaaggcg ggggcagcgg tcgcgatttt ggaacgcaat gcccctggcg
     2041 cggaccgcgt cgcgtcggag atcgcgcagg acggggggca agcggtcgcg attgagaccg
     2101 atgtatcgga agaaagagcg gtctcggccg cagtggagca caccgtcagc cggttcggca
     2161 gcgcggacat actggtcaac aacgccgcga ttttttcgac gctcgagatg cgcccgttcg
     2221 atcgaattcc gccacaggaa tgggaaagag tgttgagagt caacgttacc ggaccgttcc
     2281 tttgcgcgtg tgccgttctt ccgtatatgc gcaagcgcgg ccacggacgt atcatcaaca
     2341 tcgcttccgg cgccgtcacg ctcggacgtc cgaactactt gcactatatc gcctcaaagg
     2401 gcgcactcga ggggatgacc cgttccatgg cgcgggagct cggcgccgac ggcatcaccg
     2461 taaatgccat ccttccgggg gcaaccttca ccgaaatcgc gcgcaagacc gtcactgcgg
     2521 aacaaaaaag ggcgattgtc gccatgcaat gcgtgccccg cccgcaggtg cctgaagatc
     2581 tggttggcgc cttgctgttc ctggccggcg actcctcgtc cttcatgacg ggacaggctc
     2641 tcaccatcga cgggggtgcc acccaccgat gaaagttgtc gccgagaaac attcagcggg
     2701 aaaaggtgcc gagactgccg ccctcgtcgt cacaaacgtt cacaaggggt ccacacctaa
     2761 aggtcgtttg cgcctccaca cgctgcggta ggtattttca ttgtaaaaaa caatcccaca
     2821 acaatgactg ctcggttcct gcaaccggcg gtttgcatca ccatgttcgc atgagccgcc
     2881 gaaaacaggc gttgcccgca cagtggggcg cggcgaaaag ctcgcgcggt accccccggg
     2941 cggcttggcg cagctccggt gaatagtcgt gtctgaaaga ttcggattac acgagtcaag
     3001 gaattttcga accgaacgga gaccaaatga aatggccggg acaagcccgg ccatcgtgtt
     3061 caatgtcgtg attgcgttac gactgctgga tcgccgaggc gagccagtgg ccaccccgca
     3121 cgcgcatgaa ggtccagatt tcggtcgcct catcaggccc gccttgcagc acacggccgc
     3181 tgtcgcgatc cagcgtctcg tcgttgagcg agaaacgcat cgcgacggtg gcgtaatcgg
     3241 tgtcgccctc tcgccaagcc tcggcgagat cgccctgctg cagcttgacg tcggagacgc
     3301 ggttgaccac gcccttgctg gcattcgcgg cgagttcctc cgagaaatag gagaggagtt
     3361 cgggcgtgac gtggcggcgc aaccgcgcca gatcttcggc gctataggcg ctctgcacct
     3421 cgccgagggt tttctcgaag gcgttgaagt cgtccggcgt aagcccgacc tcgtcggtgc
     3481 cggaggcgcg cgcgctcgat ggaggcgcgc cgccgcccaa tccgaatccc atcgccgagc
     3541 gcgaattgcc gggcgcgtag tcgcgcaatg ccggaccgct ggcgagcgcc ggctggctgc
     3601 ggcgctgcca ccacgtccac acgagataac cgatgatcgc gatgatgccg atctgcagca
     3661 tcaggccgat gagcgaggcg gcccccccga gcccgccgag gaaaccttgg ccgaacagca
     3721 tgccgagcaa gccagcgccc aggaagccgg cgaacaggcc gccgaagaag cccggccgat
     3781 tgaagaagcc gcccacgggc gaggagatcg ggggccgctg cgcgaacgcg ccgcccggct
     3841 gcccgggctg cgtcatgctg cgttcgatgg gccgcgccgt cggcgtcgtc gtcgtcgacg
     3901 gcggcgtgga gaacgtttgc gagccgcggc tgccgaagcc ccccccgcgc cccgcgcggg
     3961 catcggcatc gcttgtcgcg aacgccaaga ccgccaacaa ggcgcaaagc gcgagcagcg
     4021 gatgggcgtg aaaacggagc ataacgtcct cccaggaccc tggtttggtt cgaccccaat
     4081 attggtatcc caaggcggca ttggaagagg tgccgcatgg tgtcgcagat gaggcctttt
     4141 ccctgggttt agcctctgct catcgcaagt gcccagccgt catgcctgcc acacggtcaa
     4201 gtttttgcgc agatgcggaa cttgtgtgcg ccggaacttg tctgccccgg ccttggcggc
     4261 gtggataggt cagttgtcga attcgccgtc gccgcccggc tcggccatcg gcagcgtgcg
     4321 cggcgggcgc tcctcgaagg accacgccga cgccgatcgg cgcagcccga gcgag
//
LOCUS       DATCWM010000537         2920 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_209060, whole genome shotgun sequence.
ACCESSION   DATCWM010000537 DATCWM010000000
VERSION     DATCWM010000537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2920)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2920)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2920
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_209060"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..638)
                     /locus_tag="VIQ50_10580"
     CDS             complement(<1..638)
                     /locus_tag="VIQ50_10580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HEY9360870.1"
                     /translation="MELDPVLLARLQFAFTIIYHIIFPAFTIGLSAYIATLCVIWMRT
                     GKEHYRTLAQFWTKIFAVSFAMGVTSGIVLSYQFGTNWSRFSAVLGNVIGPMIGYEVI
                     VAFFLEATFLGVMLFGWNRVPPWLHTLSAIAVATGTLMSAFWILSANSWMQTPRGYEM
                     RDGIAYPLDWLDIVFNPSFPYRLAHMVTAAYLTTSFVVLAVGARYVIAGNHL"
     gene            complement(687..1730)
                     /locus_tag="VIQ50_10585"
     CDS             complement(687..1730)
                     /locus_tag="VIQ50_10585"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009326 - formate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0008863 - formate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009061 - anaerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit gamma"
                     /protein_id="HEY9360871.1"
                     /translation="MRMTGLAARLRFLLGPRLCFLLGAMAVAGAIAFAVPAQAQQAPI
                     VDPQADVVNERTLLRELPRIQGDIDQLDPRARVLIQPDGRIWDHFHEVTLIWGAAIVI
                     LGTLAALAAAYLLLGRLRISAGRSGRKVARFKAVERFAHWLTAASFVVLGLTGLNITF
                     GKHLLLPLIGYDAFSVVSEVAKYVHNFTSFAFVIGLVLIVAMFIKDNIPDKTDIEWFK
                     QGGGFIKSKHAPARRFNAGEKLVFWGALGAGILVAVSGFLLLFPFYVTNIFGMQIAQV
                     VHAVIAVLFVALILGHIYIGTLGMEGAFEAMWTGEVDLNWAKEHHDLWLEDMQAKERP
                     GAPPRYPSAAPAE"
     gene            2003..2236
                     /locus_tag="VIQ50_10590"
     CDS             2003..2236
                     /locus_tag="VIQ50_10590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360872.1"
                     /translation="MINFKKGLAALAVIVAVGAAASPSYAQSQDGGVRISAQRAQALH
                     TCSVRAARYPQYLWGNQELYTYRACMAEHGQPE"
     gene            2501..>2920
                     /locus_tag="VIQ50_10595"
     CDS             2501..>2920
                     /locus_tag="VIQ50_10595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HEY9360873.1"
                     /translation="MACIAALIFGAAKMKNPKLLLTLRVSVATGLILGVLTLPTQKAA
                     AQFTEKKVLTLAAAQKMVAAAQAEAERQHLAGVIAVADDGGWPILVVRMDNAAYVASV
                     ELAPGKARTAALFKKPSQALEDTINHGRFAAVTAHGYI"
BASE COUNT          616 a          897 c          908 g          499 t
ORIGIN      
        1 tccaaatggt ttccggcgat aacgtaacgc gccccgactg cgagcaccac gaacgatgtc
       61 gtcagatagg ccgccgtcac catgtgcgcg agccggtaag ggaagctcgg attgaagacg
      121 atatcgagcc agtcgagcgg ataggcgatg ccgtcgcgca tctcgtaccc tcgcggcgtc
      181 tgcatccagc tgttggcgga gaggatccag aacgccgaca tcagcgtgcc cgtggcaacc
      241 gcaatcgccg agagcgtgtg cagccacggc ggcacgcggt tccaaccgaa cagcatcacc
      301 ccgagaaacg tcgcctcgag aaagaaggcg acgatgacct cgtagccgat catcggcccg
      361 atgacgttgc cgagcacggc ggaaaagcgg ctccaattgg tcccgaactg ataggacagc
      421 acgatgccgg aggtcacgcc catggcgaag gagacggcga aaatcttggt ccagaactgc
      481 gccagcgtgc ggtagtgctc cttgccggtg cgcatccaga tgacgcagag cgtcgcgatg
      541 taggcggaca gcccgatggt gaatgccgga aagatgatgt ggtagatgat ggtgaaggcg
      601 aattgaagcc gggcaagaag gacgggatcg agttccatga catcaatcct cgaacgggtg
      661 gcgatgaacg ctgcgcaatc gtgcgcttat tccgcgggcg ctgccgaggg ataccgcggt
      721 ggtgcgccgg ggcgctcctt cgcttgcata tcttccagcc acagatcgtg atgttccttg
      781 gcccagttca aatcgacctc gccggtccac atcgcctcga acgcgccctc catcccgagc
      841 gtgccgatat agatgtgccc gaggatcaac gcgacgaaca gcacagcgat cacggcgtgc
      901 acgacctgcg cgatctgcat tccgaagatg ttcgtgacgt agaacgggaa cagcagcaga
      961 aagcccgata cggccaccag gatgccggcg ccgagcgcgc cccagaacac aagcttttcg
     1021 ccggcgttga accggcgcgc cggcgcgtgc ttggatttga tgaagccgcc accctgcttg
     1081 aaccattcga tgtcagtctt gtcggggatg ttgtccttga tgaacatcgc cacgatcagc
     1141 acgagcccga tgacgaatgc gaagctcgtg aagttgtgca cgtacttggc gacttccgat
     1201 accacgctga acgcgtcgta gccgatcagc ggcagcaaca gatgctttcc gaaggtgatg
     1261 ttcagcccgg tgaggccgag aacgacgaac gaggcggcgg tgagccaatg cgcgaaccgc
     1321 tcgaccgcct tgaagcgcgc caccttgcgt cctgatcgtc ccgccgagat gcgaagccgt
     1381 ccgagaagga ggtaggccgc cgccagtgcg gcgagcgtgc cgaggatcac gatcgctgcg
     1441 ccccaaatga gggtcacttc gtggaagtgg tcccatatcc gtccgtcggg ctgaatgagc
     1501 acgcgcgccc gcgggtcgag ctggtcgatg tctccttgga tgcgcggaag ctcgcggagg
     1561 agggtgcgct cgttgaccac atctgcctgc ggatcgacaa tcggcgcctg ttgagcttgg
     1621 gccggcaccg cgaaggcgat ggcgccggca accgccattg ccccaagcag gaaacatagc
     1681 cgcggcccca gcaggaaacg tagccgcgcc gccagtcccg tcatccgcat accccgatcc
     1741 aaatcggtcg cggccacgcg cgcgagctcg cgcgccgctg cgaatatcaa cttcgcacat
     1801 aggccgcgcc cgctcgcggc cctgattgcc tggatttgcc cgatcttgcc gtttcgttgc
     1861 gtcaagcgga agccgcgcgc tcaacattac ttgcaattta gtcgcaagag ccagcgctcc
     1921 atggcaaacc ggagcaaacg agttctcccg cggcgcctaa atgttttcgc gagaccgggc
     1981 gacgacttga aggagactcg tcatgattaa ctttaagaaa ggtttggccg cgctcgccgt
     2041 cattgttgcc gtcggcgcgg ccgcatcgcc gagctatgcg cagtcgcagg acggcggcgt
     2101 caggatcagc gcgcaacggg cgcaggctct gcacacgtgt agtgttaggg ccgcgcgtta
     2161 tccgcagtac ctctggggta accaggaact ctatacctac cgcgcctgca tggccgaaca
     2221 tggccaaccg gaatgaagtg gggaggcggg tggcgacggc tgagccttgc ttggtcgcgc
     2281 acccgcgaac cggcgtgacg cctgacctgc cctccgtgcg cagctcgcaa ttaaacgatc
     2341 ttgagcagtg ccgccgcctg accgcgcgtg caaccactca gttcacgtcc accagcaggg
     2401 accgctttta gtcaccgggc ttcgctcctc cgaagcaaaa ttggaaaaat cacggcaaga
     2461 ttatcaaagc gcttccaagt gccaggcact acgctacccg atggcctgca tcgcggcact
     2521 tatattcggg gcggcgaaga tgaaaaatcc caagctgctt ttaacgttgc gcgtatcagt
     2581 tgcgactgga cttattctgg gcgtgctcac actgccgacg cagaaggcgg ccgcgcaatt
     2641 caccgaaaag aaagtgctga ctttggcagc cgcgcaaaaa atggtcgctg cggctcaggc
     2701 agaggcggaa cggcagcatc tggccggcgt catcgccgtg gccgatgatg gcggatggcc
     2761 gattcttgta gtgcgaatgg ataacgccgc ctatgtcgcc agcgtagaac tcgcacccgg
     2821 caaggcacga accgccgcgc tattcaaaaa gccgagccag gcactggagg ataccatcaa
     2881 tcacggccgc tttgcggcag tgacggcgca cggctatatc
//
LOCUS       DATCWM010000538         4024 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_538149, whole genome shotgun sequence.
ACCESSION   DATCWM010000538 DATCWM010000000
VERSION     DATCWM010000538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4024
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_538149"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..311
                     /locus_tag="VIQ50_10600"
     CDS             <1..311
                     /locus_tag="VIQ50_10600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360874.1"
                     /translation="AEPGPPNSAIAGQIVGQVDCGVERIRGGHPFPPLARAWKAANYT
                     RGVIRLLPISKRPLPVATAEVLELHQAKLRWRTVSGLKRFSALWRLDTYWTQNHGGRA
                     "
     gene            385..804
                     /locus_tag="VIQ50_10605"
     CDS             385..804
                     /locus_tag="VIQ50_10605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360875.1"
                     /translation="MALLGAAATSTRAQDAIPDLKGTWSGKGKSIVFGTHHHHPGTQT
                     TADPPRVRDIEATHTVEGQEGRLAWGRSSSAVADTKEPFAWAIASDNKTIVGADMDGY
                     FRITLVGPDRMEKCYAHNGTSQSRSIVATCYTMDRVK"
     gene            complement(1409..2122)
                     /locus_tag="VIQ50_10610"
     CDS             complement(1409..2122)
                     /locus_tag="VIQ50_10610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012386066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphorylase"
                     /protein_id="HEY9360876.1"
                     /translation="MSTRGHVVAVTCLALEARIALGPGVAVICNHASKLVASLEAAAK
                     RGASGIISFGIAGGLAPHLAAGDWVVASGVRTGQGHFPSDRGWAQALLEALPGAVHAE
                     IIGADAPVAEPAEKRQLHLRTGAVAVDTESHVAARIAAAHRIPFAACRAVIDPAHSVL
                     PPAAVFGLRHDGTADVRAVLRSLARQPSQLPALARTALDARVAAAALRRGRRLLGAGL
                     GFPYFEELALDAKLAVEMG"
     gene            2569..3963
                     /locus_tag="VIQ50_10615"
     CDS             2569..3963
                     /locus_tag="VIQ50_10615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008839085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenium-binding family protein"
                     /protein_id="HEY9360877.1"
                     /translation="MPTWTPDPSFYPSPRQAAKAPPETIAYVAAFDPDRKSPDRIAIV
                     DVDPKSSSYSEIIGNVAATEVGDEFHHFGWNACSSCLCPNAPHPHVERRYLVVPGLRS
                     SRIYILDTKPDPRAPKIVKTIEPEELAEKTGYTRPHTVHCGPGGIYVAALGNKDGKAP
                     GGVFVMDQETFEPLGRWEVDRGPQQLGYDAWWHLGYDTMVTSEWGTPDTFENGLVPEI
                     LLGSKYGRRLHFWDFTKRKHVQEIDFGEEHQLVFELRPAHDPTKAHGFVNCAISLKDL
                     SSSIWTWFREGNKWAVKKVISIPAEPADADDLPPVLKGFKAVPPLVTDIDLSMDDRFL
                     YVACWGTGDLQQYDVSDPLNPKLIGKVRIGGIVSRASHPAAKNGKLNGGPQMVEVSRD
                     GRRVYFTNSLYGAIDPQFYPEGINGWMVKLEANPAGGIAFDPKFFIDWPKGHRPHQVR
                     LQGGDCSSDSYCYP"
BASE COUNT          737 a         1355 c         1263 g          669 t
ORIGIN      
        1 tcgccgaacc tggaccgccc aactcggcaa tcgcgggcca gattgtcggc caggtggact
       61 gtggcgttga gcgaatccgc ggcggccatc cgttcccccc tctcgctcgg gcgtggaagg
      121 cggcgaatta cacccgcggc gtgatccggc tgttgccgat ctccaagcgc ccgctcccgg
      181 tagcgaccgc cgaggtgctc gagttgcacc aggccaagct tcgatggcgc actgtctccg
      241 gcctgaagcg tttttcggcg ttatggcgcc tggacacgta ttggacacag aaccacggcg
      301 gtcgcgctta acctcgaaag cgccgatgtt acgggctcaa tttgagcagc tcgccgtcag
      361 gcaatctgac atctcgtctt tgcgttggcg ctccttggcg cggcagcgac atccacgcga
      421 gcacaggacg caattcccga cctcaagggc acgtggtcgg gaaaggggaa atcgatcgtc
      481 ttcggcacgc atcaccatca tcccggaacg caaacgaccg ccgatccgcc gcgcgtgcgc
      541 gacatcgagg cgactcacac ggtggaaggg caagagggcc ggcttgcttg gggacgctct
      601 tcttccgccg tcgccgacac gaaagagccg ttcgcatggg ccatcgccag cgacaacaag
      661 accatcgtcg gagcggacat ggatggttat ttccgcatca cgctcgtcgg ccccgaccgc
      721 atggagaagt gctacgccca caacggcacg agccagagcc gatcgatcgt cgcgacctgt
      781 tacacgatgg atcgcgtgaa atgatagaca cctcgccgcg tcaatcgaac cgcggcggcg
      841 gtcagcgata gggcgggctt attgcgtgga gcatttccat tgtgcttgac gcatagacgc
      901 gccccgcacg ccgtgtcctc gcatcgcgcc ggctgacgcg cggcctattg cgcttcggcc
      961 ttggcgcaga tcgcgaccaa cgggctggta gcggcgcgcc gggacgggca agacaccgat
     1021 cgttcgttga caagggtcac cgcactcctg ccaggcccgc aatacgcgct caccagcacc
     1081 tcatcctggt tacaagctgc cgagcaggcc gcgctctcgc aacttacgcg catgacccgc
     1141 aaccccccgc ctgcggccgt gggaccagac gaacccgcca gcccagcagg acccgcatcg
     1201 cccttcggcc cggggggacc gggcggtccg ggcggccccg cctcgccctt ctcgccgggg
     1261 gggccagcgg cgccttgctc tccctttggc ccttgtggtc cctgcccgca attcgccaag
     1321 ccaaggcaga gcgcgatgac gagcgcaata cgttgcatcc gcatgtccct actcacgatc
     1381 atgctcaagc gagcggcgta ggacgggctc aacccatctc gacggcgagc ttggcgtcga
     1441 gcgcgagttc ttcgaaatac gggaagccca atcccgcgcc gagaagacgc cggccgcggc
     1501 gcaacgctgc cgccgcgacg cgcgcatcga gggcggtgcg cgcgagggcg ggaagttggc
     1561 tgggctgccg cgcaagcgag cgcaacaccg ccctgacgtc cgccgtgccg tcgtgacgca
     1621 acccgaacac cgccgccggc gggagcacgc tgtgagccgg atcgatgacc gcgcggcagg
     1681 ccgcaaacgg aatgcgatgc gcggcggcga tcctggcggc gacgtgcgac tcggtatcaa
     1741 cggcgacggc gccggtccgc agatgcaact gacgcttttc cgccggctcc gcgaccgggg
     1801 catccgctcc gatgatctcg gcatgcacgg cgccgggaag cgcctcgagc agcgcctgcg
     1861 cccatccgcg gtcgctcgga aaatgcccct gccccgttct cacacccgat gcgaccaccc
     1921 aatcgccagc tgcgaggtgg ggcgccaatc ccccggcaat gccgaagctg atgattcccg
     1981 aggcgccgcg cttggctgcg gcctcgagcg atgcgacgag cttcgaggcg tgattgcaaa
     2041 tcaccgcgac gcccggaccg agggcgatgc gtgcctccaa agcaagacag gtgactgcga
     2101 ctacgtgccc cctagtcgac attcaacgcc cgttctgttc gcgtagcgcg gccggaatcg
     2161 gccggtaatc ttccccagaa tgtgaaattg gtcaacgggt ttgcccgccc atccgccgtc
     2221 ccgtccgcat gcatttacgt gcctgcggcg cggggtcgcc gcgtatactc cctccagttc
     2281 ccgtatcttc ggcagcagta tcgatcgacc acttctccct atggattgtg ccgccgccaa
     2341 ggcattggca caggaacgga ccgggtacaa gagtcggtcc ttatgactca aggggcacag
     2401 tcagcctaca atgcgtgaaa cgcaggcaac cggcgcaatt ttccggcgcg cgcgaggagc
     2461 gcgcgcggcg cacaagcgag ccatcggctg cttggaagcg tcggtcagct gcggaccact
     2521 tgcgcaatgc ttgcccgaat cgcggcggtt tccgagagga gaattgacat gcccacctgg
     2581 acccctgatc cgagctttta tccctcccca cgccaagccg cgaaggcccc gccggagacg
     2641 atcgcctacg tcgcggcctt cgatccggat cgcaaatcgc ccgaccgcat tgcgatcgtc
     2701 gacgtcgatc cgaaatcgtc gtcgtattcc gaaattatcg gcaatgtggc ggcgaccgag
     2761 gtcggcgacg aattccacca tttcggctgg aacgcctgct cgtcctgtct gtgcccgaac
     2821 gcgccgcatc cgcacgtgga gcgccgctat ctcgtcgtcc ccggtctgcg ctcctcgcgc
     2881 atctacattc tcgataccaa gcccgatccg cgcgcaccca aaatcgtcaa gaccatcgag
     2941 ccggaagagc ttgccgagaa aaccggctat acccgcccgc acaccgtcca ctgcgggcct
     3001 gggggcattt acgtcgcggc gctcggaaac aaggacggca aggcccccgg cggcgtcttc
     3061 gtgatggatc aggagacgtt cgagccgctc ggccggtggg aggtcgaccg cgggccgcag
     3121 cagctcggct acgacgcatg gtggcatctc ggctacgaca cgatggtcac cagcgagtgg
     3181 ggcacgcccg acacgttcga gaacggtctc gttccggaaa ttctgctcgg cagcaaatac
     3241 ggcaggcgcc tgcatttctg ggacttcacc aagcgcaagc acgtgcaaga gatcgatttc
     3301 ggcgaggagc atcagcttgt gttcgagctc aggccggcgc acgacccgac caaggcccat
     3361 ggtttcgtca attgcgcgat cagcctcaag gacctgtcct cttcgatctg gacctggttc
     3421 cgcgagggca acaagtgggc ggtgaagaag gtcatttcga ttccggccga gccggcggat
     3481 gcggacgacc tgccgccggt gctcaagggc ttcaaagcgg tcccgccgct cgtcaccgat
     3541 atcgatctat cgatggacga tcgcttcctt tacgtcgcgt gctggggcac gggcgacctg
     3601 cagcaatacg acgtgtcgga cccgctcaat ccgaagctga ttggaaaagt gcgcatcgga
     3661 gggattgtgt cgcgcgcgag ccacccggcg gcgaagaacg gcaagctcaa tggcggaccg
     3721 caaatggtcg aggtgagccg cgacggccgg cgcgtctatt ttaccaactc gctctacggc
     3781 gccatcgatc cacagttcta tcctgagggc atcaacggct ggatggtcaa gctcgaagcc
     3841 aatcccgcgg gcgggatcgc gttcgacccc aagttcttca tcgattggcc gaagggccat
     3901 cggccgcacc aggtccggtt gcaaggaggt gattgctcat cggattcgta ttgctatccg
     3961 tgagcggccg aaacggcggc ggcgagtatc ggcatgagcg gagcgtccac cgaggtttgg
     4021 ccgt
//
LOCUS       DATCWM010000539         4465 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_31033, whole genome shotgun sequence.
ACCESSION   DATCWM010000539 DATCWM010000000
VERSION     DATCWM010000539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4465)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4465)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4465
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31033"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(258..1046)
                     /gene="phaZ"
                     /locus_tag="VIQ50_10620"
     CDS             complement(258..1046)
                     /gene="phaZ"
                     /locus_tag="VIQ50_10620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020178262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA];
                     GO_process: GO:0006112 - energy reserve metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="poly(3-hydroxyalkanoate) depolymerase"
                     /protein_id="HEY9360878.1"
                     /translation="MEISLHEIEGQTLRVGVRHGDEARAPLLLFNGIGANIELIEPFL
                     DALAGPEAIVFDVPGVGGSPSPWLPYRPSTVARLSAQLLDKLGHDQVDVLGVSWGGAL
                     AQQFAFQQGKRCRRLVLAATSPGHLMVPGKLTVLLKMATPRRYKDADYMKRIAGDIYG
                     GALRGSPELVRKHLRHVRWSSDYGYYLQLVACFGWSSLPWLHLLAQRTLVMTGTDDPL
                     VPVVNGRILATLIPDARFVTIDDGHLFLITSAPEAAAMISGFLS"
     gene            complement(1048..2742)
                     /locus_tag="VIQ50_10625"
     CDS             complement(1048..2742)
                     /locus_tag="VIQ50_10625"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEY9360879.1"
                     /translation="MANEVASDGDIREQAAQHTLAANPLIGVRAADIFDSARLLLAQL
                     LSNPVAATKEYLELLAELGRIAIGASALAPDPKDRRFADPAWKESLVYHALAQGYLAW
                     GNALHRFLDQAKLDKRDAERACFVASLLVDALAPTNSLPGNPAALKKLVDTGGASFLH
                     GLENFFGDLVGNGGLPAQVDRKTFAVGENLATTPGSVVYRTPVMELIQYRPVTDEVHT
                     RPLLIAPPQINKFYVFDLAPEKSITQYCLKGNLQTFAISWKNPTAAERNFGIDTYAAA
                     LEQAVDVMRDITGSADINVWGSCSGGITTSAFLAHLAARGETKVHSATVAVCLLDMAV
                     THDTTAGLFVTPESIVAAKSSSQLTGVVEGRELARMFAWMRPNDLIWNYWVNNYLLGN
                     APPTFDVLYWNNDTTRLPARLHADFLDLIETNPFVNAGRLEVCGTPLDMRQVNLDSYV
                     VAGLTDHITPWQGCYETAKLYGERSTFVLANSGHIQSLLNPPGNPKACFWTGTAGAAG
                     AETWREQAAKHSGSWWPHWLEWIKARSGDTIATPATLGSWDHPSLEPAPGRYVMER"
     gene            complement(2783..3280)
                     /locus_tag="VIQ50_10630"
     CDS             complement(2783..3280)
                     /locus_tag="VIQ50_10630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018428300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEY9360880.1"
                     /translation="MTLAQESMAKYSMASAPQFVGRELGASKWVAVDQDRIDAFAACT
                     GDRQWIHVDVARARRESPFGAPIAHGYLTLSLVAAMVMELGIIPSDAATGLNYGLDKV
                     RFIAPVKAGMRVRTRANLVAVEPQRGGRMLLRLNCTLQIEGESKPALVAELLCLLIGK
                     GDAAF"
     gene            complement(3290..>4465)
                     /locus_tag="VIQ50_10635"
     CDS             complement(3290..>4465)
                     /locus_tag="VIQ50_10635"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY9360881.1"
                     /translation="EGIGAELAAPPVDARLKTVITLSDALAQGGELPFTPVPLNGDDL
                     LFLQYTGGTTGLSKGAALSHRNLVANTEQFKAFLGDALRPGAELVVTALPLYHIFALM
                     VNFISYFSVGAENWLVTNPRDMDSFVEILRQARCTAFTGVNTLFGGLVMHPKISEVDF
                     SRLRVAIGGGAAVLPTTSAKWKALTGNDILEGYGLSETSPILTLNPPSTNGFSATVGL
                     PFPSTDIKLLDANDREAQVGEPGEVCAKGPQIMRGYWQKPQANADAFTPDGYFHTGDI
                     GVFDAKGFLKIVDRKKDVIIVSGFNVFPNEVEAVAAACLGVAECACVGRPDEKTGEAV
                     QLFVAKSPGATLSEADLIAHCRCQLAAYKVPKEVRFLDALPKSNVGKILRKDLRGLP"
BASE COUNT          796 a         1395 c         1460 g          814 t
ORIGIN      
        1 tgcatatcga ttgcgggatg cgcacttgcg agagaccgac tgcgtggctg ggcatatgag
       61 attcgaactc agaaatgtcg cggcaaatta tccctttgaa aagccgtaga gattccagga
      121 atccagccgg attccccgcc acagagacta ttcgcgtttg agctgcggcg ttgcggagac
      181 gcagctcggg cctagtgcga ggccgcagcg cattgagtag atcgtgcgcc aatcgagagt
      241 gagacggtcc cggcggctta gctcaagaac cccgaaatca tggccgcggc ctccggggcg
      301 ctggtgatca gaaacaaatg cccgtcgtcg atggtgacga agcgcgcatc gggaatcagg
      361 gtcgccagaa tgcggccgtt gaccaccggc acgagcggat cgtcggtgcc ggtcatgacc
      421 aacgtccgct gcgccagcag gtgcagccac ggcagactgc tccagccaaa gcaggcgacg
      481 agctgcaggt aatagccgta gtcgctcgac cagcgcacat ggcgcagatg cttgcgcacg
      541 agttcgggtg agccgcgcaa cgcgccaccg tagatgtcgc cggcgatgcg cttcatatag
      601 tcggcgtcct tgtagcgtcg cggcgtcgcc atcttgagga gcaccgtcag cttgcctggc
      661 accatcaggt ggccgggcga ggtggccgcc agcactaacc gtcggcagcg cttgccctgc
      721 tggaacgcga attgctgcgc caaggcgccg ccccacgaga cgccgagcac gtccacctgg
      781 tcatgtccca acttgtcgag cagctgcgcg ctcagccgtg ccacggtcga cggacgatac
      841 ggcagccagg gcgacggcga gcctccgacg ccgggcacgt cgaagacgat cgcctcgggt
      901 ccagcgagcg cgtcgagaaa cggctcaatc agctcgatgt tggcgccgat cccgttgaag
      961 agcaggagcg gtgcgcgcgc ctcatccccg tgccgcaccc cgacgcgcag cgtctgccct
     1021 tcgatctcgt gcaggctgat ctccacgcta tcgctccatg acgtagcggc cgggcgctgg
     1081 ctcgagcgac ggatggtccc agctgccgag cgtagccggt gtcgcaatcg tgtcgccgga
     1141 ccgcgctttg atccattcaa gccagtgcgg ccaccagctg ccgctgtgct ttgccgcctg
     1201 ctcgcgccac gtctccgcgc ccgccgcacc cgccgttccg gtccagaagc aggctttggg
     1261 attgccgggc ggattaagca ggctctggat gtggccgctg ttggcgagca cgaaggtgct
     1321 gcgctcccca taaagctttg cagtttcata gcagccttgc cagggcgtga tgtggtcggt
     1381 cagaccggcg accacatagc tgtcgagatt cacctggcgc atgtcgagcg gcgtgccgca
     1441 tacctcgagc cggccagcgt ttacaaatgg atttgtctcg atgagatcga ggaaatcggc
     1501 atgcaaccgc gcaggaagcc gcgtcgtgtc gttgttccaa tagaggacgt caaacgtggg
     1561 aggcgcgttg ccgagcaaat aattgttcac ccaataattc cagatcaggt cattggggcg
     1621 catccaggcg aacatgcgcg ccagctcccg gccttcgacc acgccggtga gctgcgaaga
     1681 gctttttgcc gcgacgatcg attccggcgt cacgaacagt cccgccgtcg tgtcgtgcgt
     1741 caccgccatg tcgagcaggc acaccgccac ggtggcgctg tgcaccttag tttcgccgcg
     1801 cgccgcgaga tgcgcgagaa atgccgacgt ggtgatgccg cccgagcatg agccccagac
     1861 gttaatgtcg gcgctgccgg tgatgtcgcg catgacgtcg acggcttgct ccagcgccgc
     1921 agcgtaggtg tcgatcccga agttgcgttc ggcggcagtc ggattcttcc agctgatggc
     1981 gaaggtttgt aggttgccct tgaggcagta ctgagtgatg ctcttttccg gcgcgaggtc
     2041 gaacacgtag aatttgttga tctgcggcgg cgctatgagc agcgggcggg tgtgcacctc
     2101 gtccgtcacc gggcggtact gaatcagctc catcactggg gtgcgataca cgaccgagcc
     2161 cggcgtggtg gcgaggttct cgccaactgc aaacgtcttc ctgtccacct gcgccggcag
     2221 gccgccgttc ccgacgagat cgccgaaaaa attttccaga ccgtgcagaa aacttgctcc
     2281 gccggtgtca acgagttttt tcagcgccgc agggttgccg gggagtgaat tggtcggtgc
     2341 caacgcgtct acgagcagcg acgccacgaa gcacgcgcgt tcggcatcgc gcttgtcgag
     2401 cttggcctgg tcaaggaaac gatggagcgc gttgccccag gccaggtagc cctgcgcgag
     2461 cgcgtggtag acgaggctct ccttccaggc gggatcggcg aagcgtcggt ccttggggtc
     2521 gggcgcaagt gcgctggcgc cgattgcgat gcggccgagc tcggctagca gctccaaata
     2581 ctctttggtt gctgcgacgg gattgctcag cagctgggcg agcagcaaac gcgcggaatc
     2641 aaaaatgtcc gccgcgcgca cgccaatgag cggattggcc gccaaggtgt gctgcgccgc
     2701 ttgttcgcgg atgtcaccgt ccgacgcgac ttcgtttgcc atgggtgatc ctcatccctg
     2761 cagagctagg cgcgtgcatg ggttaaaacg cagcgtcgcc tttgccgatc agcaaacaca
     2821 ggagctcggc gacgagggcg ggttttgatt cgccttcgat ctgcagcgta cagttgagcc
     2881 tgagcagcat gcggccgccg cgttgcggct cgacggcgac gaggttcgcg cgggtgcgca
     2941 cgcgcatgcc cgccttgacc ggcgcgatga agcgcacctt gtccagtccg taattgagcc
     3001 cagtcgcggc gtcggacggg attatgccga gctccatcac catcgcggca acgagcgaca
     3061 aggtgagata gccgtgggcg atcggcgcgc cgaacggact ttcgcgccga gcgcgcgcga
     3121 catcgacgtg gatccattgc cggtcgccgg tacaggccgc gaacgcgtcg atgcggtcct
     3181 ggtcgaccgc tacccatttt gacgcgccga gctcgcggcc cacgaactgc ggcgcgctcg
     3241 ccatcgagta tttcgccatc gattcttgcg ccagcgtcat ggtcgcctcc tatggcaacc
     3301 cacgcagatc cttgcgcagg atttttccca cattcgactt cggcaacgcg tcgaggaagc
     3361 gaacctcctt cggcactttg tacgccgcga gctgacagcg gcagtgcgcg atcaggtccg
     3421 cttcgctgag ggtcgcgccg ggcgacttgg ccacgaacag ctgcaccgct tcgccggtct
     3481 tttcgtccgg cctgcccacg cacgcgcatt cggcaacgcc gagacaggcg gcggcgaccg
     3541 cttccacctc gttgggaaag acgttgaagc cggaaacgat gatcacgtcc ttcttgcggt
     3601 cgacgatttt caggaaaccc tttgcgtcga acacgccgat gtcgccggtg tggaaatagc
     3661 cgtcgggggt gaaggcatcg gcattggcct gcggcttctg ccagtagccc cgcatgatct
     3721 gcggtccctt ggcacacacc tcgcccggct cgccgacctg cgcttctcgg tcgttggcgt
     3781 cgagcagctt gatatcggtc gacgggaacg gcaggcccac ggtcgcggag aagccgttcg
     3841 tcgacggcgg attgagcgtg aggatcggcg aggtttccga gaggccgtag ccttcgagga
     3901 tgtcgttgcc tgtcagcgct ttccatttcg ccgaagtcgt cggcagcacc gcggcgccgc
     3961 cgccgatcgc cacgcgcagc cggctgaagt ctacctcgga aattttcgga tgcatgacga
     4021 gaccgccgaa cagcgtattc acaccggtga aggcggtgca gcgtgcctgg cgcagaatct
     4081 cgacgaagct gtccatgtcg cgcggattgg tgaccagcca gttctcggcg ccgaccgaaa
     4141 agtaggagat gaaattcacc atcaacgcga agatgtgata gaggggcagc gccgtgacca
     4201 ccagctccgc gccggggcgc agtgcatctc ccaagaacgc tttgaactgc tcggtgttgg
     4261 cgacgagatt gcggtgggag agggcggcgc ccttcgagag ccccgtagtg ccgccggtat
     4321 attgcaggaa gaggagatca tcgccgttga gcggtaccgg cgtgaacggc agctcgccgc
     4381 cttgcgcgag cgcatcggag agcgtgatca ccgttttgag ccttgcgtcg accggcggcg
     4441 ccgcaagctc cgcgccgatg ccttc
//
LOCUS       DATCWM010000540         2000 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_209094, whole genome shotgun sequence.
ACCESSION   DATCWM010000540 DATCWM010000000
VERSION     DATCWM010000540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2000
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_209094"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..752)
                     /locus_tag="VIQ50_10640"
     CDS             complement(<1..752)
                     /locus_tag="VIQ50_10640"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEY9360882.1"
                     /translation="MPDAFAELRHELAVANRILANEGIIDAFGHISVRNPKDPNRYFI
                     SRHRASELVEPSDILEMTLDSKPVVPTNVRLYSEMVIHGEIYKVRPDVNSVCHHHAPS
                     VLPFCATGVELVPLFHLGGTLGSKVPFWDSRDEFGDTNLLVSTPEEGASHARALGPHY
                     MLLLRRHGASLAGKSLRECVFRSIYTTRNAELQLRALAIGALGPLSPGEVEKCGGHNL
                     GPRGVERAWEYWVTRLQKAEAMWAAAGLPRMK"
     gene            complement(957..>2000)
                     /locus_tag="VIQ50_10645"
     CDS             complement(957..>2000)
                     /locus_tag="VIQ50_10645"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HEY9360883.1"
                     /translation="LHEHDGGRYIGTDDLVIMRDPEENWVNGATYRAMVQDRNHVSLW
                     ISPGKHGRQIREKYFRAGKPCPVLISCGHDPLLFLAGGNELKFGLCEYDYAGGHRGEP
                     YEILPSELHGLPMPAHAEIVLEGEMVETIKAREGPFGEFTGYYASSPSEQPLVEVRRV
                     YHRNDPILGIASPMRPPSDFSFSKCVMKAGMIWDEVERAGLSGVDGVWVHEFGGARMF
                     NVIAIKQAYPGHARQAGLLASGCQSASYLGRFVVVVDEDVDPSDLFDVMWAICTRCDP
                     ANDIEFVRRAWSGPLDPLLDKASSTNSRAIIDACRPFERLADFPRVARASPELRRKVQ
                     EKFADLLARIGCA"
BASE COUNT          349 a          646 c          652 g          353 t
ORIGIN      
        1 tccttcatcc gcggcagtcc ggcggccgcc cacatggcct ccgccttttg cagccgcgta
       61 acccaatact cccacgcgcg ctcaaccccg cgcgggccga ggttgtggcc gccgcatttc
      121 tccacctcgc ccggcgacag cggtcccaga gctccgatcg ccagcgcgcg cagctgcagc
      181 tccgcgttgc gggtggtgta gatcgaacgg aacacgcatt cgcgcaacga tttgccggca
      241 agcgaggcgc catggcgccg cagcagcagc atgtagtgcg ggccgagcgc gcgggcatgg
      301 gaggcgccct cctccggcgt gctcaccagc aggttggtat cgccgaattc atcccggctg
      361 tcccagaacg gcactttgga ccccagggtc ccgccgagat gaaacagcgg cacgagctcc
      421 acgccggtgg cgcagaaagg cagcaccgat ggggcgtggt ggtggcatac ggaattcacg
      481 tccggccgca ctttgtagat ttcgccgtgg atcaccatct cgctatagag ccgcacattc
      541 gtcggcacga ccggcttgga atcgagcgtc atttccagaa tgtccgaggg ctcgaccagc
      601 tctgaggccc gatgccgcga aatgaaatag cgattgggat ccttcggatt gcggacgctg
      661 atgtggccga acgcgtcgat aatgccttca ttggcgagaa tgcggttggc gacggcgagt
      721 tcatggcgca gttcggcaaa agcgtcaggc atggcttgat cctccgtgct ggaacaattc
      781 ggtcgacggc gtgaccggct ttatgccgag catccacgtc tttggcgtgg ctggcgacgg
      841 taaagccgtg gatggccggg catgcgcgtg cgctctcacg cgcgtcttcc gacgcgctat
      901 gcccgagccc tgacgaaaga aagggtgctc atcgtcggtc gtctcgccgg tgcgtgctag
      961 gcgcatccga tcctggcgag aagatcggcg aatttttcct ggaccttgcg tcgcagctcg
     1021 gggctcgccc gcgcaacgcg gggaaaatcc gccaggcgct cgaacggccg gcaggcatcg
     1081 atgatggcgc gggaattggt cgagctcgcc ttgtcgagca acggatcgag cggtccactc
     1141 caggcgcggc gcacgaattc gatgtcgttt gcggggtcgc agcgcgtgca tatcgcccac
     1201 atgacgtcga acaggtcgct cggatcgacg tcttcgtcga ccacgacaac gaagcgcccg
     1261 agataggagg cggactggca gccggacgcc agcaggccgg cctgacgcgc atggccggga
     1321 taagcctgct tgatggcgat gacgttgaac atgcgcgcgc cgccgaattc gtgcacccac
     1381 acgccgtcga ccccggagag tcccgcgcgc tcgacctcgt cccagatcat tcccgccttc
     1441 atcacgcatt tgctgaagga gaagtccgac ggcgggcgca tcggcgaggc gatgccgagg
     1501 atcggatcgt tgcggtgata gacgcgcctg acctcgacca gcggctgctc gctcgggctc
     1561 gaggcgtaat aacccgtgaa ctccccgaat ggtccttccc gtgccttgat ggtctcgacc
     1621 atctcgccct cgagcacgat ctcggcgtga gccggcatgg ggaggccatg gagctcgctc
     1681 ggcaagatct cgtacggctc gccgcgatgg ccgccggcat agtcgtattc gcacagcccg
     1741 aacttgagct cgttaccccc ggcaagaaac agcagcggat cgtgcccgca ggagatcagc
     1801 acgggacatg gcttgccggc acggaagtat ttctcgcgaa tctgccgccc gtgcttgccc
     1861 ggcgagatcc agagcgagac gtggttcctg tcctgcacca tggcgcggta ggtcgcgccg
     1921 ttcacccagt tctcctccgg gtcgcgcatg atgacgaggt cgtcggtgcc gatatagcgg
     1981 ccgccgtcgt gctcgtgcag
//
LOCUS       DATCWM010000541         2971 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_203880, whole genome shotgun sequence.
ACCESSION   DATCWM010000541 DATCWM010000000
VERSION     DATCWM010000541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2971)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2971)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2971
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203880"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..195)
                     /locus_tag="VIQ50_10650"
     CDS             complement(<1..195)
                     /locus_tag="VIQ50_10650"
                     /inference="COORDINATES: protein motif:HMM:NF025731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superinfection immunity protein"
                     /protein_id="HEY9360884.1"
                     /translation="MHPASEPSTFAELVFYLAFGIVLLIIGSICAAPTLLAFRRNHPN
                     RWIILVINVALGGTIIGWGIA"
     gene            643..942
                     /locus_tag="VIQ50_10655"
                     /pseudo
     CDS             643..942
                     /locus_tag="VIQ50_10655"
                     /inference="COORDINATES: protein motif:HMM:NF025178.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske (2Fe-2S) protein"
     gene            complement(2300..2623)
                     /locus_tag="VIQ50_10660"
     CDS             complement(2300..2623)
                     /locus_tag="VIQ50_10660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018449267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9360885.1"
                     /translation="MSKVWFVTGAGSGIGAATARAALKAGDRVVATGRNLDSGSPVRF
                     ERAAWHRLLSLQIDLGAPSARDVRTIQPLDVARHLASSDERCRLSAVTRVRSVNGPPD
                     SGQLR"
     gene            complement(2626..>2971)
                     /locus_tag="VIQ50_10665"
     CDS             complement(2626..>2971)
                     /locus_tag="VIQ50_10665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003539819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEY9360886.1"
                     /translation="HRVTAGVHCNLAVNPRTVEAPLQGAAIMGLSTCLPGSAITLKDG
                     VVEQGNFGEFTVARMTDIPAFAVHIVPSAEAPTGMGEPGLPPLAPAFANAIAQLTGKP
                     LRQLPFNIESKS"
BASE COUNT          514 a          972 c          984 g          501 t
ORIGIN      
        1 cgcgatcccc cagccgatga tcgtaccacc aagggcgaca ttgataacga ggatgatcca
       61 acggttcggg tggttgcgcc ggaatgcgag caacgtcggg gcggcacaga tggagccgat
      121 gatcagcaag acgatcccga aggcgagata aaagacgagc tcggcgaaag tggatggctc
      181 agatgccggg tgcatctcag aacgtccgca ggataccagt agaaatgtcg cggtctaatg
      241 ggggatcgag aggaggatgc cgacgatgaa ggacccaggc atagccgtag ctcggggtct
      301 gtctgaggcg cttcgccctt aggacgcgcg cggccagcaa cgtgcctgca aaggggacgc
      361 cccggcgcct gcagccgctt tcgcgaagac gctcggcacg acgacggagg tcgacgatcc
      421 gctgccacgc accggcgacc ccatcggcct tataagacga gggttcgcat gccgtctaag
      481 ctcgaccggc gagctgtacc tcagttccgt accgcttgat gatccagtgc ggttcctttc
      541 gcgcagcccc taaaccacgg catcctctcg cctttgcgcg aggggatgcc tatgttgcgg
      601 agtacctgca gcggccccaa agcgacaatg ggaggtatgc tcatggacgc gcccagcaag
      661 gaatttgcgc tggcgggcag ccttgaggag ctgaagatca aggggcggct cgttgtgcac
      721 ggtggccatc gtccgatcct cgtcatctac gaccgcgggc gcgtcttcgc cctcgacaat
      781 cggtgcccgc acatgggctt cccgctcgag cgcggcagcg tcgaggacgg catcttgacc
      841 tgtcactggc accacgctcg cttcgatctc gaaagcggct gcaccttcga cctatgggcg
      901 gacgacgtgc cgatctgccc ggtcgaggtg cgtaatggtg acgtctgggt gaagaccacg
      961 ttgacccatg ccgatctcgc cgcgcactgg catcagcggc ttgcgaacgg cctcgcccac
     1021 gacctcggcc tcgtcattgc caaggccatg catggtcagc tcgcggccgg cgtaccgcag
     1081 gccgaaatcg tacgggaggt ggcgctgttc ggggcgcgaa atcgcgacgg ctggggcgtg
     1141 ggtcttacga tccttacggc actcgccaat atcctgcctg tgctgccgga ggaggaagcc
     1201 tatctcgctc tattccacgg cgcacgccgc gtggcggcgg actgcgacgg cgaggcgccg
     1261 cggcgggaac gcgcgccgct tggaagccga ccggatccgg ccgcgctcaa acgctggctg
     1321 cggcgttgga caaacgtgcg ccatcgcgag gcggccgagc gcaccctgct cacggcgatt
     1381 gcggccggct tctccccggc tgaactcgct gatgccctgt tcgccgccga gaccgagcgg
     1441 gctttcgccg acaccgggca ctcgctcgac ttcatcaaca aggcgttcga gtgcctcgac
     1501 ctggtcggct ggcaacacgc ggcggctctg ctgccgactg tcgtcggtca gatggtagcg
     1561 gcccgtggcg ccgaggaatc gactgcctgg cgccagcccg ttgaccttgt tgcgttgtgt
     1621 gaggaatcaa ccagcgaact cgcggacctg ttcgctgccg gacgcggctc gcgtgactgg
     1681 tcgggccacg ccgcacttgc tcaagagctg ctcggtgacg atccggccag aatcgttgac
     1741 gcgctcaagg aggcgatccg cgccggtgcc gctcctgctg accttggcca atccctcgcg
     1801 tacgcggcag cgctcagggt ggcgcgcttc ggcaatgcca acgagcacgc cgactgggaa
     1861 acggcgcatc acgtcttcac ctacgccaac gcagtccacc agatgctgac gcgcatcggg
     1921 actgccaaca tcgacactca cgtcacggcc gtccgcggcg tattgcacgg agcgatggcg
     1981 ctctaccttg ctcgctatct caatgtgccg ccagcgcgca tcccgggcga cggcggcgag
     2041 cagctcgatg atctgcccac ggatccagag acgatcggcg ccgccttgct cgacgccttc
     2101 gaccggcaga gacaggtcga tctcgccgca cgcctggtgg cacggcatct cacgctcggc
     2161 cattcgccgc aggcgctgat cgccacgctc gcgcatgcgg tgctacgcga ggatgcaggc
     2221 ttccatgcgt atcagatgct ggaggcggga gtccggcaat tcggcgtgtg gggcgacacg
     2281 gacgagggcc ggcacatcct catcgcagtt gcccgctatc tggcggccca ttcaccgacc
     2341 gaacgcgcgt cactgcagac agccgacatc gctcgtcgct tgatgcgagg tggcgagcta
     2401 catcaagagg ctggatcgtc ctgacgtcac gcgctgaggg cgcaccaagg tcgatctgaa
     2461 gtgacaaaag cctgtgccag gcggcccgct caaaacggac gggcgagccg ctgtcgagat
     2521 tgcggcccgt cgcgactacc cggtcgcctg ccttcagcgc cgcccttgcc gttgcagcgc
     2581 cgatgccgct gcccgcaccg gtgacgaacc agaccttgct catgctcaac tcttgctttc
     2641 gatgttgaag ggtaactggc gcagcggctt gccggtgagt tgcgcgatgg cattggcgaa
     2701 cgcgggcgcc agcggtggta ggccgggttc gcccatcccg gtgggtgcct cggcgctggg
     2761 cacgatgtga acggcgaacg ctgggatgtc tgtcatgcgc gcgaccgtga actcgccgaa
     2821 attgccctgc tcaacgacgc cgtccttgag cgtgatcgcg gaacccggca ggcacgtcga
     2881 caggcccatg attgccgcgc cctgcaacgg ggcctcgacg gtgcgcgggt ttacggccag
     2941 attgcagtga acgccggcgg tgacgcgatg c
//
LOCUS       DATCWM010000542         4801 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_489823, whole genome shotgun sequence.
ACCESSION   DATCWM010000542 DATCWM010000000
VERSION     DATCWM010000542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4801)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4801)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4801
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_489823"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            211..1938
                     /locus_tag="VIQ50_10670"
                     /pseudo
     CDS             211..1938
                     /locus_tag="VIQ50_10670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019903090.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004783 - sulfite reductase (NADPH)
                     activity [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent assimilatory sulfite reductase
                     hemoprotein subunit"
     gene            2064..3182
                     /locus_tag="VIQ50_10675"
     CDS             2064..3182
                     /locus_tag="VIQ50_10675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360887.1"
                     /translation="MARADPSLEGGGRRIFMAMSDKERQAKRRAALKAAGRPAKSRGR
                     LAVLLGDAVTPSVTPSAVTRKSRIRPAYVAEHVVPRVRAAVNGSGKLPDRTTVIKIIG
                     DLYPNAKEAALKAYDRALPRHILDRCVPLTRQWGDRRLDAAPEEAYYLICDLITLAAP
                     DCLDRLSKFFDSLEQQWGGENKFDQLLKLREKLKADRRDWPKRRPQRGNSAAIVEAIL
                     ALMRRNPKRCWTTSDLAGRLGKSVKAIWHLTSEMCDRHLIVVVDKGRGLLALREAGIP
                     ITKSVGGRIIEKLDALPEMRFSPLARAIGIEPAAMSTPVQTLRRIGVLEPPDRHADPN
                     KRAPLRLSADARAKIGRRETIRDRRGFILWAPADAGQN"
     gene            3505..4764
                     /locus_tag="VIQ50_10680"
     CDS             3505..4764
                     /locus_tag="VIQ50_10680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018407893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEY9360888.1"
                     /translation="MSRPAKGARRWLRPEKRNPDGALRERAVWVIRDGSRKISTGCAP
                     EDIEGAERALGEYLTSKYQPNRGRKRRPDQVLIADALMIYLTDVAPHRAREKEIKQRV
                     AALDAWWQDKTLAEVNGANCRAYVQHRVSQQWKSSKPERTGNKARMVSEAAPRRELED
                     LRAAINYHYRQGLCSEAVPVTLPEKPLPRDTWLTRSEAAKLLRAAWRARQVMRDNVTL
                     RVVGKHIARFILVGLYTGTRSSAICGAALMPTVGRGYVDLGTKEDCTDGVFYRRAIGR
                     RATKKRQPPVRLPPKLVRHLRRWRDRGISKTAVVEWNGKRIASIRKGFEAAVQAAGLG
                     PEVTPHILRHTCATWLMQSGRVETWEAGGFLGMTVKQLEETYGHHHPDFQKEAANALR
                     GQYAARNPVNKMRVSTADGAKIRGISK"
BASE COUNT          991 a         1471 c         1511 g          828 t
ORIGIN      
        1 tggctcgagg gcggcgcgta tttctacgtg tgcggcgatg ccaagggtat ggccaaggac
       61 gttcgtgcga ctctcatccg cgcttttgcc gatgtgaaag cgatctcgcc tgaggcggcg
      121 gagcgctgtg tcgctgcgat cgagcgcgaa cggcgttacc tgcaagacac gtattgaacg
      181 acacgttgcc atgtacggcg aagccccatg agccaggaac tctcgcgcaa cgaacgcatc
      241 aaggaagcga gcgattatct tcgcggaacg ctggccgagg gtattcgccg ggaaatcact
      301 ggtgcgatca gcgaggacga tgcgcagctg gtgaaattcc acggcatgta cctgcaggat
      361 gatcgcgatc tgcgccccga gcgcacgcgc aagaagatgg agaaggcatt tgccttcatg
      421 gtccgcgtcc gggtcccggg cggagtcctt acccccgcgc aatggttggc gctcgaccgg
      481 gtagcgcgcg actacggcag cggcagcgtg cgcttgacca cgcggcagtc ggtccagctg
      541 cacggtgtca tcaaatcgaa tttgcaatcg acgctccgcg cgatcgattc cgtcctgctc
      601 aattcgatcg ctgcatgcgg cgatgtcaac cgcaacgtca tgtgcaatcc caatccgtat
      661 gtgtcgcgcg cgcatgccgc cgcgctcgac ctggcacgcg aaatctccga tcatttgacg
      721 ccgcgcacgc cggcctatcg cgagatctgg ctcgacggcg agcgcattgc cggcggcgag
      781 gatgaggttg tggagccgat ctacggcaag acttatctgc cgcgcaaatt caagatcgca
      841 atcgccgtgc cgccgttgaa cgacgtcgac gtgtttgcgc acgatctggg attcatagcc
      901 gtcctggact cgaacggtga cgtgcagggc tggaatatca cggccggcgg cggcatgggc
      961 atgacccacg gcgagcctga cacctatccc cgcaccgccg acgtcatggg gttctgcgcg
     1021 cgcagcgatg cgctcgcaat tgcggaggcg gtcgtcaccg tgcagcgcga ttggggcgac
     1081 cgggcaaacc gcaagcatgc gcggctcaaa tacaccattg aggaccgcgg cctcgacccc
     1141 ttccgcgccg aagtggagcg ccgggcgggg gtgaagctcg gccccgccaa gccatttgtt
     1201 ctcacttcaa ccggcgaccg ctacggctgg accgagggcg aggatggacg cggccatctc
     1261 acgctgttca tcttgagcgg caggctgcgg gatgtcggga cgcaggcgca gcacctttcc
     1321 gccctgcgcc ggatcgccga gcagcacgac ggcgatttcc gcatcacggc caatcagaac
     1381 ctcatcgttg ccggcgtgcg accggaacgc cgggcagcga tcgaggagat tgccgcgagc
     1441 aatggcctgt cggcgccgcc atccggcttg cgtcgcaatg cggtggcctg cgtcgcgctg
     1501 ccgacctgcg ggctcgctct cgcggagagc gaacgctatc tgcccgactt gctggatgcc
     1561 ctcgatgcgc ggctcgcggc gcatggtctc tctcgcgacg acatcgtaat tcgcatgacc
     1621 ggctgcccca acggctgtgc gcgaccctat ctcgcggaga tcggtctcgt cggaaaaggt
     1681 ccgggccgct acaacctcta tctcggcgcg gcattcgacg gctcgcgtct atccaagctc
     1741 tacgccgagg acgtcgatca tgccgccatc atccgtgagc tcgatccgtt gtttgcggcc
     1801 tatgccgctg agcgcaaggc cggcgagcat ttcggcgact tcgtcattcg cgccggcttt
     1861 gtcactcgaa cccgcaatgg ccgcgacttt cacgccaatg tcggggcgaa gcgggcgggc
     1921 gcccaacacg tcccataaga aggcggcggg gcggccgatt gggggtagac cggaagcagc
     1981 gaggacccgc gaatcagcta tgattctcct tggcacgggc cgggttgcaa accgttcgca
     2041 tcgttccaac cgtccaacga tgcatggccc gcgccgaccc ttctcttgag ggcggtggac
     2101 ggcgaatttt catggcgatg tcggacaaag agcgccaggc caagcgtcgc gcggccctga
     2161 aggcggcggg gcgacccgcg aaatcccgtg gcaggttggc cgttttactc ggggacgccg
     2221 tgacaccctc cgtgacaccc tcggccgtga cccggaaatc gcggatcagg cctgcctacg
     2281 ttgccgaaca tgtagtgcca cgcgtgcgcg ctgcggtgaa cggatcgggc aagttgcccg
     2341 accgaacgac agtgatcaaa ataatcggcg atctctaccc caatgcgaaa gaagcggcat
     2401 taaaggctta cgatagggcg ttgccacgcc acattctcga tcgatgcgtc cctctcaccc
     2461 gacaatgggg cgaccgaaga ttggatgcgg cgcccgaaga ggcctactac ttaatctgcg
     2521 acctgattac tcttgccgcg ccggattgtt tggaccgtct tagcaagttc ttcgactcac
     2581 tcgaacagca atggggcggc gagaataagt ttgaccaatt actaaagctt cgtgagaagc
     2641 taaaagccga ccggcgggat tggccgaagc gccggccaca gcgcggcaat agtgctgcga
     2701 ttgttgaggc gatacttgcc cttatgcgtc gcaatcccaa gcgttgttgg acgacgtcag
     2761 accttgccgg caggctcggc aagtccgtta aagctatctg gcatcttacg agcgagatgt
     2821 gcgatcggca cctcatcgtg gtggtcgaca agggtagagg tttattagcc ctacgagagg
     2881 ccggcattcc gataacaaaa tcggtcggcg gcaggatcat cgaaaagcta gacgccttgc
     2941 ccgaaatgag attcagcccg ctggcgcgcg ctatcggcat tgagcccgct gccatgagca
     3001 ctccggtaca gacgctgcga agaattggtg tgctggagcc gcctgaccga catgccgacc
     3061 caaacaaacg agcgccattg aggctgtcag cggacgcacg cgccaagatc gggcggcgcg
     3121 aaacgatccg cgatcgaagg ggcttcatcc tatgggcgcc ggcagatgct ggacagaatt
     3181 agtgtccggc cgacaaatta aatgtccagc cgattctcga acggacatct aatacgtcct
     3241 cgctttccca gccaatcgtt gggaaatttc gcgtcaaccg aatcgaaacg acgcgaagcc
     3301 aatgcgcaag ccgctgccgc cgctcaacag cctcaagccc gacacgccat tgcgattggc
     3361 cgtagccgcg gcgctggcat ttccggatgg ctcgataacc gagagcagct tgcgaaaagc
     3421 gtgcacgcga cgcgagttgg aacacgagat tttgcgcggg aagtatcaca ccacgcttgc
     3481 ggcaattaac gaatggagag cacgatgtcg cgtccagcca aaggggctcg ccgatggctt
     3541 cgcccggaaa agcgcaaccc ggacggcgcg ctccgcgagc gcgcggtctg ggtcatccga
     3601 gacggatcac gcaagatcag cacgggctgc gctccagaag atattgaagg cgccgagcgg
     3661 gcgctcggcg aatacctcac cagcaagtat cagcccaacc gtgggcgcaa acgtcgtcca
     3721 gatcaggtcc tcatcgccga cgcgctgatg atctacctga ctgacgtcgc cccgcaccgc
     3781 gcgcgcgaga aggagatcaa gcaacgagtg gcggcgctcg atgcgtggtg gcaggacaag
     3841 acccttgcgg aagtgaacgg cgccaattgc cgcgcctatg tccagcatcg tgtttcacag
     3901 cagtggaaat cctcgaaacc cgagagaact ggcaacaagg cgcgcatggt gagcgaggcc
     3961 gcgccgaggc gtgagcttga ggatctgcgc gccgcgatca actatcacta ccggcagggc
     4021 ctttgctccg aagcggtgcc agttacgctt cccgaaaagc cacttcctcg ggacacgtgg
     4081 ctgaccaggt ccgaagcagc gaagctattg cgggccgcat ggcgcgcccg ccaggtcatg
     4141 cgagacaatg tcacgctgcg cgtcgtcgga aagcacatcg cccggttcat cctcgtaggc
     4201 ctgtacacgg gcacaagatc gagtgcgatc tgtggtgcgg cattaatgcc cacagtggga
     4261 cgcggatacg tcgatcttgg aaccaaggag gattgcacgg acggagtctt ctatcgccgc
     4321 gccatcggtc gacgtgcaac aaaaaaacgc cagccacctg taaggctccc gcccaaactg
     4381 gtccggcatc tgcgccgctg gcgtgatcgt gggatttcca agaccgcggt agtcgagtgg
     4441 aacggcaagc ggatcgcaag catacgtaag ggtttcgaag cggccgtgca ggccgccggc
     4501 ttgggcccgg aagtaacgcc acacatactt agacacactt gtgcgacctg gctgatgcaa
     4561 tccggtcgtg tcgaaacgtg ggaggccggc ggcttcctcg gaatgaccgt gaagcagctc
     4621 gaggaaacgt acgggcacca ccacccggac ttccagaaag aggccgccaa cgcgctacgc
     4681 ggccagtatg cggccagaaa ccccgtgaac aaaatgagag tttcgactgc ggacggcgcg
     4741 aaaatacgag ggatttcaaa gtgaggatag ataaacacct cgttcgggac gagggggtcg
     4801 c
//
LOCUS       DATCWM010000543         5273 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_397974, whole genome shotgun sequence.
ACCESSION   DATCWM010000543 DATCWM010000000
VERSION     DATCWM010000543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5273
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_397974"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2645)
                     /gene="secA"
                     /locus_tag="VIQ50_10685"
     CDS             complement(<1..2645)
                     /gene="secA"
                     /locus_tag="VIQ50_10685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012047326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0017038 - protein import [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HEY9360889.1"
                     /translation="MIGAIARKLFGSSNERRIKSYLPRVAAINALERDLEGLSDEALR
                     ARTDAFKQQVAEGASLDDILVEAFATCREAAKRTLGQRHFDVQLMGGMILHEGRISEM
                     KTGEGKTLVATLPVYLNALAGRGVHVVTVNDYLAKRDAEWMGQIYNFLGLSVGVIVHG
                     LDDEQRKRAYDADVTYGTNNELGFDYLRDNMKYRLEDMVQRGHIYAIVDEVDSILIDE
                     ARTPLIISGPLDDRSEFYNTIDAYIPKLEKADYEVDEKQRTVTLTEVGMEKMEQMLRG
                     DGLLKAHSLYDVENVSTVHHVNQALKAHKLFHRDKDYIVRNGEVVIIDEFTGRMMPGR
                     RYSEGLHQALEAKERQPVQPENQTLASITFQNYFRMYEKLAGMTGTAMTEADEFLDIY
                     NLEVIEVPTNMPMVRVDDDDEVYRTAAEKYRSILALIDDCKARGQPVLVGTTSIEKSE
                     QLAEMLRQRGWEQHDFSDPNAFAALYSGDDGASKAKVFAILNARYHEQEAYIIGQAGV
                     PGAITIATNMAGRGTDIQLGGNADMRIRQELKDVGDEDGEHARQAREIRAQVARLKDK
                     ALAAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGHSKFFLSLEDDLMRIFGTDKLDT
                     MLQRLGLKENEAIVHSWINKALEKAQQKVEARNFDIRKNVLKFDNVMNDQRKVIFEQR
                     VEWMRDEAVNEVVGDMRHAAVDDLVAKHVPENAYPEQWDTKGLREELKRILDLDLPAD
                     EWAKEEGIAEEELLSRIEKRADEHMAAKVAQWGADVMRYVEKSILLQTLDHLWREHLV
                     MLEHLRQVIGLRGYGQRDPLNEYKAEAFNLFEAMSTHLREAVTSQLMRVEIRAAPPPE
                     EPASLPYMEAHKIDPSSGEDELALAR"
     gene            3000..3917
                     /locus_tag="VIQ50_10690"
     CDS             3000..3917
                     /locus_tag="VIQ50_10690"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020093372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEY9360890.1"
                     /translation="MTCPNVLPRFAPRRRPLAYAVMAALLFIAPAVSGCSKNSSNSSS
                     EAPSSASDPVIARVNGVDITQGDLALAEEDVGSEMQAVSPEAKREQLISYLADIIMVT
                     QAADKKNLADNPDFKRRLAFLRNKLLMGYELQQEAKTAVTDEALHQTYDEAVKSMAGQ
                     EEVRARHILVESEDEAKALLEQLKNGADFATLAKEKSKDPGAAEGGDLGYFTKDQMVP
                     EFADVAFKMYPGQLSNPVKTQFGWHVIKVEDRRTKQPPEFDKVKDQIEAFLARKAQTD
                     FITKLRQSAKVDRLDKPAEQNKPAEQKKN"
     gene            4099..>5273
                     /gene="argJ"
                     /locus_tag="VIQ50_10695"
     CDS             4099..>5273
                     /gene="argJ"
                     /locus_tag="VIQ50_10695"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004358 - glutamate N-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HEY9360891.1"
                     /translation="MASSVSPLAPAQFPEMPPVEGVRLATGAAGIRYPGRTDVLLALF
                     DRGTTVAGVFTRSKCPSAPVDWCRAHLKGGAASALVVNSGNANAFTGKSGRTATKLTA
                     DIAASAAGCKPSHVFLASTGVIGEPLDATKFAAVMDRLVANAAPGAWHEAAKAIMTTD
                     TFPKGAAAMARIGAAPVTICGIAKGAGMIAPDMATMLSFVFTDAPISARVLQSLLKQG
                     ITDTFNAVTIDGDTSTSDTLLAFATGAAATRGAPSIANVSDPRLPAFRKAFDAVLANL
                     AEQVARDGEGARKLVEIIVEGAVSKPSARKIALSIANSPLVKTAIAGEDANWGRVVMA
                     VGKAGERADRDRLSIWFGGIRVAHRGERDPRYDEAAVSAAMKKPEITLKVALGLGRGR
                     "
BASE COUNT          909 a         1732 c         1613 g         1019 t
ORIGIN      
        1 cgcgccagcg cgagttcgtc ctcgccgctc gagggatcga tcttgtgcgc ctccatatag
       61 ggaaggctgg ccggctcctc cggcggcggc gctgccctga tctcgacgcg catgagctgc
      121 gaagtcaccg cctcgcgcag atgggtgctc atggcctcga acaggttgaa cgcttccgcc
      181 ttgtactcgt tgagtggatc gcgctgtcca tacccgcgca gcccgatcac ttgccgcaga
      241 tgttccagca tgacaagatg ttcgcgccag agatggtcga gcgtctgcag caggatcgat
      301 ttctcgacat agcgcatcac gtcggcgccc cattgcgcga ccttcgccgc catgtgctcg
      361 tccgcgcgct tctcgatccg ggagagaagc tcttcctcgg cgataccctc ctccttcgcc
      421 cactcgtccg ccggaagatc gagatcgagg atgcgtttga gctcttctcg cagccccttc
      481 gtatcccact gctcgggata ggcgttttcg ggaacgtgct tggcgaccag gtcgtctacc
      541 gccgcgtggc gcatatcccc cacgacctcg ttgaccgcct cgtcccgcat ccactcgacc
      601 cgctgctcga agatcacctt gcgctgatcg ttcatcacgt tgtcgaactt gaggacgttc
      661 ttgcggatgt cgaaattgcg cgcctcgacc ttctgctgcg ccttctccag tgccttgtta
      721 atccaggaat ggacgatcgc ctcgttctcc ttgagcccca ggcgctgcag catcgtatcg
      781 agcttgtcgg tcccgaagat gcgcatgagg tcgtcttcca aggagagaaa gaacttggaa
      841 tgcccgggat cgccctgccg gccggagcgg ccgcgcagtt ggttgtcgat gcgcctgctc
      901 tcgtggcgct ctgtaccgag cacgtaaagt ccgcccgcgg cgagtgcttt gtccttgagc
      961 cgcgcgacct gcgcgcggat ctccctcgcc tgccgcgcgt gctcgccgtc ctcatcgccg
     1021 acgtccttga gttcttggcg gatgcgcatg tcggcattgc ccccaagctg gatgtcggtg
     1081 ccgcggccgg ccatgttggt ggcaatggtg atcgcgccgg gcactccggc ctgaccgatg
     1141 atataggcct cctgttcgtg gtagcgcgcg ttgaggatcg cgaatacctt ggctttggac
     1201 gcgccgtcat cgccggaata gagggcggcg aacgcgttcg ggtcggagaa gtcgtgctgt
     1261 tcccagccgc gctggcgcag catctcggcc aattgctccg acttctcgat cgaggtcgtg
     1321 cccacaagca ccggctgccc ccgcgccttg cagtcgtcga tcagcgcgag gatggaacgg
     1381 tacttttccg ccgccgtgcg atagacctcg tcgtcgtcgt cgacgcgcac catgggcatg
     1441 ttggtcggga cttcgatcac ttccagattg tagatgtcga gaaattcgtc ggcctcggtc
     1501 atcgccgtgc cggtcatccc ggcgagcttc tcgtacatgc ggaagtagtt ttggaaggtt
     1561 atcgaggcga gcgtctggtt ttccggctga accggctggc gctccttggc ctccaaggcc
     1621 tgatgcaatc cctccgaata gcgccgtccc ggcatcatgc ggccggtgaa ttcatcgatg
     1681 atcaccactt cgccgttgcg gacgatgtag tccttgtcgc gatggaacag cttgtgcgcc
     1741 ttcagcgcct ggttcacgtg gtggacggtc gagacgttct cgacgtcata gagcgagtgg
     1801 gccttgagca gaccgtcgcc gcgcaacatc tgctccatct tctccatgcc gacctcggtc
     1861 agcgtcaccg tgcgctgctt ctcgtcgacc tcgtagtccg ccttttccag cttcgggatg
     1921 taggcgtcga tcgtgttgta gaactccgaa cggtcgtcca gcggaccgga gatgatgagc
     1981 ggcgttcgcg cctcgtcgat cagaatggag tcgacctcgt ctacgatggc gtagatatgg
     2041 ccgcgctgga ccatgtcctc gagccggtac ttcatattgt cgcgcaggta gtcgaagccg
     2101 agttcgttgt tcgtgccgta ggtcacgtcg gcgtcgtaag cgcgcttgcg ttgctcgtcg
     2161 tcgaggccat ggacgatgac gccgacgctc agcccgagga aattatagat ctggcccatc
     2221 cattcggcgt cgcgcttggc gaggtagtcg ttcaccgtca ccacgtgcac tccgcgcccg
     2281 gcgagcgcgt tgagatagac cggcagcgtc gccaccagcg tcttgccttc gccggtcttc
     2341 atttccgaaa tccgtccctc gtgcaggatc atgccgccca tgagctgcac gtcgaagtgc
     2401 cgttggccga gcgtgcgctt ggccgcctcc cggcaagtgg caaatgcctc aaccagaatg
     2461 tcatcgaggc tcgcgccctc cgccacctgc tgcttgaacg cgtccgtgcg cgcacgcagg
     2521 gcctcgtcgg agagtccctc aaggtcgcgc tccagcgcgt tgatcgccgc aacccgcgga
     2581 agataggact tgatccgccg ctcgttcgaa gaaccgaaca acttgcgggc aatagcgccg
     2641 atcatgcaat gagcccttcg cgtcctcgca ggtgttgctg ccgcatctta ccaaatccga
     2701 cgggaaggaa cgccacggca gaagacggtt ttcgtcgcaa cagcgcctgc ctgcgagcat
     2761 ccatggccgt ggaatgcgga aaatgccgca cttttcgatc gtctttcatg caaacggcgg
     2821 cggcttgcgg tcggatcggc cagatttgtc gagagatagg agggggccac acccttgtca
     2881 atcggccgcc aaggcgctca cgttctcgtc acaatctctc gcttagcgat tgccaagcag
     2941 cgccgtttta cctaactctc cggcgcgcct ccgatggtcg ctcgatccag gatcacgcca
     3001 tgacctgccc aaacgtgctg ccccgtttcg cgccgcgccg gcggccgctc gcgtacgccg
     3061 ttatggcggc actgctgttc atcgcgccgg ccgtatccgg ctgctcgaaa aactcctcaa
     3121 actcctcatc ggaagcgccg tcctcggcgt ccgacccggt catcgcgcgg gtcaatggcg
     3181 tcgacatcac acagggggat cttgcgctcg ccgaagaaga cgtgggttcc gagatgcagg
     3241 ccgtttcgcc ggaggccaag cgcgaacaac tgatttcata cctcgccgat atcatcatgg
     3301 tcacgcaggc cgccgacaag aagaacctgg ccgacaatcc cgacttcaag cgccgattgg
     3361 cgttcctgcg caacaagctg ttgatgggat acgagttgca gcaggaggcc aagactgcgg
     3421 tcaccgacga agccttgcat cagacctacg acgaggcggt gaaatccatg gccgggcagg
     3481 aagaagtgcg tgcccgccac atcctggtcg agagcgagga cgaagcgaaa gcccttctcg
     3541 agcagctcaa gaacggcgct gattttgcaa cgctggccaa ggagaagtcc aaggatcccg
     3601 gcgccgccga gggcggcgat ctcggctatt tcaccaagga tcagatggtg cccgaattcg
     3661 ccgacgttgc ctttaagatg tacccgggac agctctccaa tccggtgaag acgcagttcg
     3721 gctggcacgt catcaaggtc gaggaccggc gcacgaagca gccgccggaa ttcgacaagg
     3781 tgaaggatca gatcgaggcc tttttggcgc gcaaggcgca aactgacttc atcaccaagc
     3841 tgcgccagag cgccaaagtc gatcgcctcg acaagccggc cgagcagaac aagcctgccg
     3901 agcagaagaa gaactgacca acaccgggtt gggtattcgc cgatctcgtc gcgaccgcca
     3961 gtcccgccaa gccgacgcca ttattcgctg tcccgttacg gcgccgctta gcggtggcga
     4021 gggcgtgaag ccgtcgattg gattggctat accgcttggc tgcccttggc cggctccggc
     4081 cacgatagag aacatgccat ggcctcctcc gtctcgccgc ttgctcccgc gcagtttccg
     4141 gaaatgccgc ccgtggaggg cgtcaggctg gcaaccggcg cggccggaat ccgttatccg
     4201 ggacgcaccg acgtgctgct ggcgctgttt gaccggggca ccacggttgc cggcgtattc
     4261 acccgctcga aatgtccatc ggcccccgtc gactggtgcc gcgcgcattt gaaaggcggc
     4321 gcggcgagcg cgctcgtcgt caattccggg aatgccaatg cctttaccgg aaaatccggg
     4381 cgcaccgcga ccaagctcac tgccgacatt gccgccagcg ccgccggctg caaaccctcg
     4441 cacgtgtttc tggcgtccac cggcgtcatc ggcgagccgc tcgacgccac caagtttgcc
     4501 gccgtcatgg atcgcctggt tgcgaatgcc gcgcccggcg cctggcacga ggcggccaag
     4561 gccatcatga ccaccgacac gtttcccaag ggcgccgcag ccatggcgcg gatcggcgcc
     4621 gcgccggtca ccatctgcgg catcgccaag ggggccggca tgatcgcccc cgacatggcc
     4681 accatgctct ccttcgtctt taccgacgcg ccgatttcgg cacgcgtgct gcaaagtttg
     4741 ctcaagcagg gcatcaccga cacgttcaat gcggtgacga tcgacggaga cacctcgacc
     4801 tccgacacgc tgctggcctt cgcgaccggc gccgctgcga cgcgcggggc accgagcatc
     4861 gcaaacgtat ccgatccgcg gttgccggcc ttccgcaaag ccttcgacgc cgtgcttgcc
     4921 aatctcgccg agcaggtagc gcgcgacggc gagggcgcgc gcaagctggt cgaaatcatc
     4981 gtcgagggcg ctgtgtccaa accctcggcg cggaaaatcg cgctgtccat tgccaattct
     5041 ccgttggtca agaccgctat tgccggcgag gacgccaatt ggggccgcgt ggtgatggcg
     5101 gtcggcaagg ccggcgaacg tgccgaccgc gaccggcttt cgatctggtt cggcggcatc
     5161 cgcgtcgcgc accggggcga gcgcgatccg cgctatgacg aggcggcagt ctcggcggcg
     5221 atgaagaaac ccgagatcac gctcaaggtc gcgctggggc taggtcgcgg ccg
//
LOCUS       DATCWM010000544         2384 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_268610, whole genome shotgun sequence.
ACCESSION   DATCWM010000544 DATCWM010000000
VERSION     DATCWM010000544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2384)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2384)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2384
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_268610"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            56..451
                     /locus_tag="VIQ50_10700"
     CDS             56..451
                     /locus_tag="VIQ50_10700"
                     /inference="COORDINATES: protein motif:HMM:NF016370.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease domain-containing protein"
                     /protein_id="HEY9360892.1"
                     /translation="MTRVNTEPARRLRRNQTDAERLLWFRLRDRRLEGLKFKRQVPIE
                     RFVVDFFCADAKLIVELDGGHHTQNSERDADRTRVLEAMGYLVLRFWNHDVIRNMDGV
                     LEDILSTINRDRSEPPHPTPLPCGERERT"
     gene            474..>2384
                     /locus_tag="VIQ50_10705"
     CDS             474..>2384
                     /locus_tag="VIQ50_10705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HEY9360893.1"
                     /translation="MSRTEQTLRRVAAERILVLDGAMGTMIQALGLDEDGYRGARFDA
                     WNREVRGNNDLLILSQPAKIRDIHLAYFRAGADIVSTNTFSSTRIAQADYGMAGIAYE
                     LNVEGARLARAAADLAQNEDGRPRFVAGAIGPTNRTASISPDVANPGFRAITFDELRD
                     AYAEQIKGLLEGGADLLLIETIFDTLNAKAAIAAVADVTELRGEHVPVMISGTITDRS
                     GRLLSGQTPAAFWNSVRHAAPFSIGLNCALGAKEMRAHIAEIARIADTFVCAYPNAGL
                     PNEFGHYDESPCFMAELLGEFAEAGLVNVVGGCCGTTPEHISAMVRAVEGKAPRRVPE
                     VPRLLRLSGLEAFTLTPEIPFVNVGERTNVTGSAKFRKLVTADDYAGALAIARDQVEN
                     GAQIIDVNMDEGLLDSEKAMTTFLNLIAAEPDIARVPVMVDSSKFSVIEAGLKCLQGK
                     AVVNSISLKEGEAAFIAHAKTVRRYGAAVVVMAFDEQGQADTLERKCAITKRAYHILV
                     EEVGFPPEDIIFDPNIFAIATGMEEHNGYGVAFIEAAGWIRANLPHAHISGGVSNLSF
                     SFRGNEPVREAMHSVFLYHAIHAGMDMGIVNAGQIAVYDDLEPELRAACEDVVLNQRP
                     DAAERLLALAQRY"
BASE COUNT          434 a          769 c          753 g          428 t
ORIGIN      
        1 agcgcggtgc gcttcctctc ccccctgggg agagggttgg ggtgaggggg gtcggatgac
       61 gagagtgaat accgagcccg cccggcgact gcgccgcaat cagaccgatg cagagcgact
      121 gctatggttt cgactacgcg atcggcgatt ggagggattg aagttcaagc ggcaggtccc
      181 gatcgagcgc tttgtcgtcg atttcttctg cgcggatgcc aagctcatcg tagagctcga
      241 tggtggtcac cacacccaaa atagcgaacg tgatgcggac agaaccagag tcctggaagc
      301 gatggggtac ctcgtgctgc gattttggaa tcacgacgtg atacgaaaca tggacggtgt
      361 gctcgaagac attctgagca ccatcaatcg tgacagatcg gaaccccctc accccacccc
      421 tctcccctgc ggggagaggg agcgcacctg agcgcgtggc aatggtcgtg tctatgtcac
      481 gtaccgagca aacgctgcgc cgcgtcgccg ccgagcgcat cctcgtgctc gacggcgcga
      541 tgggcacgat gatccaggcg ctcgggctcg acgaggatgg ctatcgcggc gcgcgcttcg
      601 atgcctggaa ccgcgaggtg cgcggcaaca acgatctcct catcctcagt cagccggcga
      661 agatccgtga cattcatctc gcctatttcc gcgccggcgc cgatatcgtc tcgaccaaca
      721 ccttctcctc gacgcgcatc gcccaagccg actacggcat ggcgggcatc gcctacgagc
      781 tcaacgtgga aggcgccagg cttgcccgcg cggccgccga tctcgcgcaa aatgaggacg
      841 gccgtccgcg cttcgttgcc ggcgcgatcg ggccgaccaa tcgcaccgcc tcgatctcgc
      901 ccgacgtcgc caatcccggt ttccgcgcaa tcaccttcga cgagctgcgt gacgcctatg
      961 ccgagcaaat caaaggtctg ctcgagggcg gcgccgatct tttgttgatc gagacgattt
     1021 tcgacacgct caacgccaag gcggcgattg cggcggttgc cgatgtcacc gagttacgcg
     1081 gcgagcacgt gccggtgatg atctccggca ccatcaccga tcgctcgggg cgattgctgt
     1141 ccgggcagac gccggcggca ttctggaatt cggtacgtca cgccgcgccg ttctcgatcg
     1201 ggctcaattg cgcgctcggc gcaaaggaga tgcgtgcgca catcgccgag atcgcgcgga
     1261 ttgccgacac cttcgtctgt gcctatccca atgcaggtct gcccaacgag ttcggccact
     1321 atgacgagag cccctgcttc atggcagagc tgctcggcga gttcgcggag gccggactgg
     1381 tcaacgtggt cggcggctgc tgcggcacca cgcccgagca catctccgcc atggtgcgcg
     1441 cagtcgaggg caaggcgccg cgacgtgttc cggaggtgcc tcggcttctg cgtctgtccg
     1501 ggctcgaggc gttcacgctc acgccggaaa ttcccttcgt caatgtcggc gaacgcacca
     1561 acgtcaccgg atcggccaag ttccgcaagc tcgtcactgc cgacgactat gcgggggcgc
     1621 tcgccatcgc ccgcgaccag gtcgagaacg gcgcgcagat catcgacgtc aacatggacg
     1681 agggtttgct cgattccgag aaggcgatga ccacctttct caatctgatc gccgccgagc
     1741 ccgacatcgc gcgcgtgccg gtgatggtcg actcctcgaa attctcagtg atcgaggcgg
     1801 ggctcaaatg cctgcagggc aaggcggtgg tgaactcgat ctcgctgaaa gagggcgaag
     1861 ccgctttcat cgcccacgcc aagacggtgc gccgctacgg cgccgcggtc gtcgtgatgg
     1921 ctttcgacga gcagggccaa gccgacacgc tcgagcgcaa atgcgcgatc accaagcgcg
     1981 cctaccatat cctggtcgag gaagtcggct tcccgccgga ggacatcatc ttcgatccca
     2041 acattttcgc catcgcgacc gggatggagg agcacaacgg ttacggagtc gccttcatcg
     2101 aagctgcggg ctggatccgg gcgaaccttc cgcacgcaca tatctccggc ggcgtatcga
     2161 acctgtcgtt ctcgttccgc ggcaacgagc cggtgcgcga ggccatgcat tcggtgttcc
     2221 tgtatcatgc gattcatgcc ggcatggaca tgggcatcgt caatgccggg cagatcgcgg
     2281 tctacgacga tctcgagccg gagctgcgcg cggcctgcga ggacgtggtg ctcaaccagc
     2341 ggccggatgc tgccgagcgt ctgctcgcgc tcgcgcagcg atac
//
LOCUS       DATCWM010000545         2683 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_4042, whole genome shotgun sequence.
ACCESSION   DATCWM010000545 DATCWM010000000
VERSION     DATCWM010000545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2683)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2683)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2683
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4042"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..735
                     /locus_tag="VIQ50_10710"
     CDS             <1..735
                     /locus_tag="VIQ50_10710"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009025434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HEY9360894.1"
                     /translation="YVSALITDFESLSGDRKFGDDVAVAGGFGRFHGESICVIGHEKG
                     SSTESRLKHNFGMARPEGYRKAERLMQMADRFGIPVVSLVDTAGAYPGIGAEERGQAE
                     AIARSTDASLELGVPNIAVIIGEGGSGGAIAIASANRVLMLEHAIYTVISPEGAASIL
                     WRDTSKAQEAATSMKITADDMMRFGVIDQIVTEPSGGAHRDPAAAIASTGEAIAHALE
                     ELAGLDRETVRRQRREKFLAIGRALG"
     gene            1034..2434
                     /locus_tag="VIQ50_10715"
     CDS             1034..2434
                     /locus_tag="VIQ50_10715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEY9360895.1"
                     /translation="MRALLASAAIAAALALASCDTDSSTPAVGGRHLQPLSDRMLAEI
                     ESKNMAKESPILVRVFKEESELEIWKEDKTGRFALLHTYPICRWSGELGPKIKQGDRQ
                     APEGFYTITPGLMNPNSNYYLAINIGFPNAYDRANGRTGAFVMIHGDCSSAGCYAMTD
                     EQVGEIYALARESFFGGQKTFQIQAYPFKMTPLNMARHRNSPNMAFWKMIKEGYDHFE
                     VTRLQPKVDICEKRYVFDAESSGKFSAADRCPAYKIPEEIASAVREKQRRDDVQTAEL
                     SNRTPAAPAKTGVDGGMNATFLTALKSHGGPGAVIHTAVGTIPPHVNPPREPESAAGS
                     MFSLASADPRLAPGPGPTVQVASATSSGGVGGFFSHLFGSKTSDDQAGASRTTQPADA
                     SASKPKRTVTAKAAPSAPRPAETKTANAAKPAAPKQEASAEPERTAASSNGQLSGAAP
                     TVPSGGFENRFGAWNN"
BASE COUNT          500 a          869 c          874 g          440 t
ORIGIN      
        1 tatgtcagtg ccctgatcac tgacttcgag tcgctgtccg gcgaccgcaa gttcggcgac
       61 gatgtcgcgg tcgccggcgg cttcgggcgc ttccacggcg agagcatctg cgtcatcgga
      121 cacgagaagg gatcatcgac cgaaagccgc ctcaagcaca atttcggaat ggcgcggccg
      181 gagggatacc gcaaggcgga gcggctgatg cagatggccg accgcttcgg cataccggtg
      241 gtgtcgctgg tcgacacggc gggcgcctac cccggtatcg gcgcggagga acgcggccaa
      301 gccgaggcca tcgcacgctc gaccgacgcc agtctcgaac tcggcgtgcc gaacatcgcg
      361 gtcatcatcg gggaaggcgg ctcgggcggc gctattgcca tcgcctctgc caaccgggtc
      421 ctgatgctcg agcacgcgat ctataccgtc atctcgccgg agggcgccgc ctcgatccta
      481 tggcgcgaca cgtcgaaggc gcaggaggcg gcaacgagca tgaagatcac ggccgatgac
      541 atgatgcgtt tcggggtgat cgaccagatc gttaccgagc cgtctggggg agcgcatcgc
      601 gacccggcgg cggccatcgc ctcaaccggg gaggccatcg cccacgcgct tgaggagctt
      661 gcgggtctcg accgagagac ggttcgccgc cagcggcgcg aaaaattcct cgccatcggg
      721 cgcgcgttgg gttgacgcga gcgggccgcg atgccgatta cgcctcgcaa agtcctggca
      781 agccattgtt ttaccaagga ctttccgacg gaacaattct tgatccttgc cctgatctca
      841 cccaagtctt ggcctagcgt gactgcgccg caggagactg gcggggcgat ttcgatgcga
      901 gaccgcgccc aaggtcgtcc tcggcacgct cgatcgccgg tccactgtgg tgtttccgga
      961 ccgcgatcgg acggggggag gcttggggaa gcctagcggt cgggggagtt tgcagttgaa
     1021 tcgtgggcct ttggtgcgcg cgctcttagc gtcagctgcg attgcggcgg cgttggcgct
     1081 tgccagttgc gacacggaca gcagcacgcc ggcggtcggc ggccgccacc tgcagccgct
     1141 gtcggatcgg atgctggccg agatcgaaag taagaacatg gcgaaggagt cgccgatcct
     1201 cgtgcgggtc ttcaaagagg aatccgaact cgagatctgg aaagaggaca agaccggacg
     1261 ctttgctctc cttcacacct atccgatttg ccggtggtcg ggagaactag gccccaagat
     1321 caagcaaggc gaccggcagg cgccggaggg cttctacacc atcactcccg gcttgatgaa
     1381 tccgaattcg aactactacc tcgcgatcaa catcggcttt ccgaacgctt acgatcgggc
     1441 gaatggacgc accggcgcgt ttgtgatgat ccacggtgac tgctcgtcag ccggctgcta
     1501 cgccatgacg gatgagcagg tcggcgaaat ctatgcgctg gcgcgcgaat cattcttcgg
     1561 cggccagaag acgttccaga tccaggccta tcccttcaag atgactccgc tcaacatggc
     1621 gcggcatcgc aattcgccga atatggcgtt ctggaaaatg atcaaggagg gctatgacca
     1681 tttcgaggtc acgcgtctcc aacccaaggt cgacatatgt gagaagcgtt acgtgttcga
     1741 cgcggaatcg tcgggcaagt tcagcgccgc cgaccggtgt ccggcctata agatccctga
     1801 ggagatcgca tccgcggtca gggagaagca gcgacgggac gacgtccaga ctgctgaact
     1861 gagcaatcgc acgccggcgg ccccggccaa aaccggtgtt gacggcggca tgaatgcaac
     1921 cttcctgacg gcgttgaaaa gccacggcgg tccgggcgcg gtcatacaca ccgcggtcgg
     1981 caccattccg ccccacgtca acccgccgcg cgagccggag agcgccgccg ggagcatgtt
     2041 cagccttgcc tcggccgacc caagactcgc ccccggcccg ggcccgacgg tgcaggttgc
     2101 ctcggcgacg agctcgggcg gagtcggcgg cttcttcagc catctgttcg gctccaagac
     2161 cagcgacgat caggccggcg cttcgcgtac cacgcagccc gccgacgcgt ccgcatccaa
     2221 gccgaagcgc accgtcacgg cgaaggcggc gcccagcgcc ccccggccgg ccgagaccaa
     2281 gacggccaat gcggccaaac ctgccgcgcc aaaacaagaa gcgagcgccg agccggagcg
     2341 aaccgcagcg agctccaacg ggcagctcag cggcgccgcg ccgaccgtgc cctcgggcgg
     2401 tttcgagaac cgcttcggcg cttggaacaa ctaagcatcc cgtccgcaac caaacggatc
     2461 ccccgcgctg cttgtcccct gcccgtcagg ccgggcggcg aagcgctggc agttcaatag
     2521 gattgatggc cggtctttaa gcgaaccgcc cgtggcagtg cttgtatttc ttgcccgagc
     2581 cgcagggaca ggcctcgttg cggccaacct tgccccagct tgatggatct ttcggatcgc
     2641 gcgcgggcgc ctccgttgcc gcagcggtga tcccgtggcg ggc
//
LOCUS       DATCWM010000546         3292 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_409067, whole genome shotgun sequence.
ACCESSION   DATCWM010000546 DATCWM010000000
VERSION     DATCWM010000546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3292
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_409067"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..271
                     /locus_tag="VIQ50_10720"
     CDS             <1..271
                     /locus_tag="VIQ50_10720"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015317521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEY9360896.1"
                     /translation="GHMGPEAAVGGPIALLRDGDIIAIDAAKGTLDVKLSKAELDARA
                     KAWKPRQPEITSGYLWKYAQQVGAARHGALTHPGATAERACYADI"
     gene            285..1190
                     /locus_tag="VIQ50_10725"
     CDS             285..1190
                     /locus_tag="VIQ50_10725"
                     /inference="COORDINATES: protein motif:HMM:NF019843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY9360897.1"
                     /translation="MALLGVAVGLSPAISFDGTRAPEAGTVSLPEDLPSPAAGSTSLG
                     NATPLVAVPSASPAAPLTLPPRAAMPSSPLEALRSGTQALRQGKTEQALMELEYAAEQ
                     GVPGAIWKLGRMYADGDGVDLNKARAYGYFRRLTTMHGDDSAGTPNARYLANAFVTLG
                     LYHLEGIPGTLKADPKVAGEMFRYAAAYFADPEAQYQLGRLYLLGKGAPKDAIQAARW
                     LRLSANKGDHRAQALLGSMLFKGEEVSRQAALGLFWLIVAKDGAKPDETWITDMYTSA
                     LAQADDAERAMARKYLEDWLKSRRE"
     gene            1590..2234
                     /locus_tag="VIQ50_10730"
     CDS             1590..2234
                     /locus_tag="VIQ50_10730"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEY9360898.1"
                     /translation="MYKAPSTPTWAGSYVGIAGGGAWGGATLRNSVTGADQTPRFDLG
                     GGIVGITSGFNLQGANGVVGFEADISAVSKKASAFEFPPNAAFSNEVSERWLSTFRGR
                     IGYARDNWLLYATAGGALANVASNLLAPAGTISDQQWHWGWTAGGGVEVKLNQDWSAK
                     IEYLYVGLQDKSYFNPTPNPVFPGSQRLHLDDHIVRVGVNYKLPWNILDSFFKH"
     gene            complement(2224..3012)
                     /gene="xth"
                     /locus_tag="VIQ50_10735"
     CDS             complement(2224..3012)
                     /gene="xth"
                     /locus_tag="VIQ50_10735"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008311 - double-stranded DNA 3'-5' DNA
                     exonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEY9360899.1"
                     /translation="MRIATWNVNSVKQRVDNLTAWLLERRPDIVCLQETKCVDEAFPR
                     EPFEALGYNVAVHGQKAFNGVALFSKFPLEDVTARLPGDDADSHARFLEAVVSTAQGA
                     LRFASVYLPNGNPAGTDKYAYKISWMDRLIHYARERLQLEEPLVLGGDFNVIPTELDA
                     RFPDRWVSDALFLPRTRRKFRTLYHLGLTDAVRAGSDTPGPFTFWDYQAGAWQKNDGI
                     RIDHLLLSPQAADRLVAAGVDKHVRGWEKPSDHVPVWADLELSA"
BASE COUNT          599 a         1039 c         1080 g          574 t
ORIGIN      
        1 cggtcacatg ggtcccgaag ccgccgtcgg cggcccgatc gcgcttctgc gcgacggcga
       61 catcatcgcc atcgatgcag ccaagggcac gctcgatgtc aagctcagca aggctgagct
      121 cgatgcgcgg gcgaaggcct ggaagccgcg ccaaccggaa ataacctcag gatatttgtg
      181 gaagtacgcc cagcaggtgg gagcggcgcg ccacggcgcc ctcacccatc ccggcgcgac
      241 ggccgagagg gcgtgctatg cggatatcta ggctgatcgc aagcatggcc ttgctcggcg
      301 ttgccgtcgg cctctcgccg gccatcagct ttgacggcac gcgcgcgccc gaagcaggta
      361 ccgtgtcgct gccggaagac ctccccagcc ctgcggccgg gagcacctcg ctcggcaacg
      421 caaccccgct ggtcgccgtg ccttcagcct cgccggccgc gccgctcacg ctgccgccgc
      481 gcgcggccat gccgtccagc ccgctcgagg cgttgcgttc cggcacgcag gcgctgcgcc
      541 aaggcaagac cgagcaggcg ctgatggagc tcgaatacgc cgccgagcag ggcgttcccg
      601 gcgcgatctg gaagctcggg cgcatgtatg ccgatggcga cggggtcgac ctgaacaagg
      661 cgcgcgccta cggctatttc cgccgcctca ccaccatgca cggggacgat agcgccggaa
      721 cacccaacgc gcgctacttg gccaatgcct tcgtgacgtt gggcctctac catctcgagg
      781 gcatccccgg gacgctgaag gcggatccca aagtcgcggg ggagatgttc cgctacgcgg
      841 ctgcgtattt cgccgatccc gaggcccagt atcagctcgg acggctctac ctgcttggca
      901 agggcgcacc caaggacgcg atccaagcgg cgcgctggtt gcgtttgtcc gcgaacaaag
      961 gcgatcaccg cgcgcaggcg ctgctcggca gcatgctttt caaaggcgaa gaggtgtccc
     1021 gccaagcggc gctcgggctg ttctggctca tcgtggccaa ggatggcgcg aagccggacg
     1081 aaacgtggat cactgacatg tataccagcg cgctggcgca ggccgatgat gccgaacggg
     1141 cgatggcccg taaatatttg gaagactggc tgaaaagccg ccgcgagtga gactgcctca
     1201 aggcgcggct ctcatcgtca ttcctgggtg cgtgcagttg cagacgagtg cgccagtctg
     1261 cgcaagcttg gctgtgtgtg cccaaaaggc catgccccac gtccataacg acggcggagt
     1321 cccgccgcta tggcagcgcg gccgaaatga caaacgacaa agtggaactc tgtggcgtcc
     1381 gcgccacact cgccgaaaat ccacgttgca gcctcgcgac ctgatggacc ctcagccggg
     1441 ccgcgcctat gtcttgcggc caatgcgaaa tgcgttgagt tgaggtttgg gatgaggact
     1501 tcgctgtgcg caagcacggc ggcattggca ttggttacgg cgtcggcact gccggcgcca
     1561 gccatcgccg ctgacctcat attgcaccga tctacaaagc accgtccacg ccgacctggg
     1621 ccggctcgta cgtcggcatc gccggcggcg gcgcttgggg cggcgcaacg ttgcgaaata
     1681 gcgtgaccgg ggcggatcag acgccccgat ttgacctcgg cggcggcatc gtcggcatca
     1741 cctcgggctt caacctgcaa ggcgcaaacg gcgtagtcgg cttcgaggct gacatctcgg
     1801 ccgtgagcaa gaaggcaagc gcgttcgagt ttccccccaa cgccgccttc agcaatgagg
     1861 tcagcgagcg gtggctctcg actttccgcg ggcgcatcgg ctacgcgcgg gacaactggc
     1921 tcctctacgc cacggccggc ggtgcgctcg ccaacgtcgc aagcaatctc ctcgctcccg
     1981 ccggcaccat ctcggaccag cagtggcatt ggggctggac cgcgggcggc ggcgtcgagg
     2041 tcaaactcaa tcaggattgg tcagcgaaga tcgaatatct ttacgttggg ctgcaggaca
     2101 aatcctactt caacccgacg cccaacccgg tctttcccgg cagtcagcgc ctgcacctcg
     2161 acgatcacat cgtccgcgtg ggggtcaact acaagctgcc ttggaacatt ctggacagct
     2221 tcttcaagca ctgagttcga gatcggccca caccggcacg tggtcggagg gcttttccca
     2281 gccgcgcacg tgcttgtcga cgccggcggc gaccagccgg tcggcggctt gcggcgacag
     2341 cagcagatgg tcgatgcgga tgccgtcgtt cttctgccag gcgccggcct ggtagtccca
     2401 aaaggtgaaa ggaccaggag tgtcgcttcc ggcgcgaacc gcatcggtta atccgaggtg
     2461 ataaagggtg cggaattttc gccgcgtgcg ggggagaaac agcgcgtcgc tcacccagcg
     2521 gtcgggaaag cgcgcatcga gttcggtcgg aatgacgttg aaatctcccc ccagtacgag
     2581 cggttcttcc agctgcaggc gttcacgcgc ataatgaata agtctgtcca tccagctgat
     2641 tttataagca tacttgtccg tacccgccgg attgccgtta ggcaaataca ccgaggcgaa
     2701 acgtagcgct ccctgcgcgg tcgacaccac cgcttccaga aaccgggcat ggctatcggc
     2761 gtcgtcgccg ggcaatcgcg cggtcacgtc ctcgagcggg aatttcgaga atagcgcgac
     2821 accgttgaag gccttctgcc cgtgcactgc gacattgtag cccagtgcct cgaagggctc
     2881 gcgcggaaag gcttcgtcca cgcactttgt ctcctgcagg cagacgatgt cgggccgccg
     2941 ctccaagagc caggcggtca ggttgtccac tcgctgtttg acggaattga cgttccaggt
     3001 ggcgatgcgc atcgcgggcg gaagggttgg gggtggcgat gtttgggcgc tcggcagttg
     3061 tcggtggaat gaacggcttg tcgtgaaggt tataccgttt ttacgacggc gcctcatagc
     3121 gatatgttag aaggttattc tcgcatataa aaaggctcgt atgagcgggt caccggcaag
     3181 cagagaggga gtccgggcgg gccgatgcaa ggccggcgcg gcgcggtgat gacgaagcgg
     3241 atgctggtgg tgctggcggt ggtgctggct gtcgcggccg gctgtgccat cg
//
LOCUS       DATCWM010000547         2692 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_381787, whole genome shotgun sequence.
ACCESSION   DATCWM010000547 DATCWM010000000
VERSION     DATCWM010000547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2692
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_381787"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1041
                     /locus_tag="VIQ50_10740"
     CDS             <1..1041
                     /locus_tag="VIQ50_10740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxidase"
                     /protein_id="HEY9360900.1"
                     /translation="RQLRDEGVNDPQNWQPPFGTGEVHIGLQAFSDSEEKRRRILAFA
                     REQYERISGVHLLVVQDFGAQPGDLNPLGYKDGIDQPAIEGSGVEPLPGQGPRIKAGE
                     FILGYPGEAGVPLPMPQPDVLGRNGTYVGFRKYQSRVGAFNRFLRAHGSTEEERELLA
                     AKLVGRWRSGAPLTLAPHVDDPALGADPKRNNDFDYANDPSGRQAPSGCHIRRMNPRD
                     SKLTRLTDVNLHRLIRRGATYGAPYDANALSEADDEVPRGAIFLFISAKAMATIEFLQ
                     QEWVNDGNFIGIGGERDPIIGRQDEEAVFTIPREPVRRRVHGIETFNVLRGGEYFFIP
                     SLSALRWLGELE"
     gene            1075..1923
                     /locus_tag="VIQ50_10745"
     CDS             1075..1923
                     /locus_tag="VIQ50_10745"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY9360901.1"
                     /translation="MTGQSIRPQFRTIDGLSIRYAESEPRDDHALLLSPWPESIYCYE
                     PTWHRLAEQTHLVAIDLPGFGQSECRDSLMSPRAMGEFVARVADAFGLEQPHVVGPDV
                     GTAASLFAAALYPDRFRSLVVGTGGTAVPLQLSGVLKEWVEAPSIEPYRKIDGRQIVT
                     AAIATLERFKPTEAARQDYLASYEGERFAESMRYVRNYPEQLPILRDLLPTIKTPVLI
                     INGARDPVVPPVNAEYLHERLPRSTLNFIDAGHFIWEDAADTYAALVTSWWAGGYTRA
                     GCGVHQ"
     gene            1920..>2692
                     /locus_tag="VIQ50_10750"
     CDS             1920..>2692
                     /locus_tag="VIQ50_10750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017271003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY9360902.1"
                     /translation="MNRDRRHFLGTTLMTLTAAQLSTTALARAGTTTPAQLPSVKPGT
                     SVSFTSLKQIDAGLLNVGYAEAGPIDGPPVLLLHGWPYDIHTYVDVTPLLASAGYRVI
                     VPHLRGYGTTRFLSAETLRNGQPSALALDAIALMDALKIEKAIVAGCDWGARTADIVA
                     ALWPERCKALVSVSGYLIGSQALGKTPLPPKAELQWWYQYYFATERGRAGYDKYRRDF
                     AKLIWQIASPKWDFDDATFERSAAALENPDHVSIVIHNYR"
BASE COUNT          507 a          859 c          850 g          476 t
ORIGIN      
        1 cggcagctcc gggacgaggg cgtcaacgat ccgcagaact ggcagccgcc gttcggcacc
       61 ggagaggtcc acatcgggtt gcaggctttc agcgattccg aggagaagcg gcgccgcatc
      121 ctcgcatttg cccgcgagca atacgagcgc atctcggggg tccacctgct ggtcgtccag
      181 gacttcggcg cgcagccggg cgacctcaat ccgctgggtt ataaggacgg catcgatcaa
      241 ccggcgatcg agggcagcgg cgtcgagccg ctaccgggcc agggacctcg gatcaaggcc
      301 ggcgagttca ttctcggata tcccggcgag gcgggcgttc cgctgccaat gccgcagccg
      361 gacgtccttg gtcgcaacgg cacctatgtg ggttttcgca aatatcagtc gcgcgtcggc
      421 gcgttcaatc gattcctccg ggcgcacgga agcaccgagg aagagcggga attgctcgct
      481 gcgaagctgg tcggccgttg gcgcagcggc gctccgctga cgctggcgcc gcacgttgac
      541 gacccggccc tcggcgcaga cccaaagcgc aacaacgact tcgactacgc taacgacccg
      601 agtggtcggc aggcgccgtc cggatgccat attcggcgca tgaatccgcg cgactcaaaa
      661 cttactcggt taactgacgt gaacctgcat cgactcataa ggcgcggagc cacgtatgga
      721 gcgccgtacg acgcgaacgc gctgtcggaa gcggacgacg aagtcccgcg cggcgcgatc
      781 ttcctgttca tcagcgcgaa ggcgatggcc acgatcgaat tcctgcaaca ggagtgggtc
      841 aacgatggga atttcatcgg gatcggcggc gagcgggacc caatcatcgg gcgtcaggac
      901 gaagaagccg tgttcaccat tccgagggag ccggtcaggc gccgcgtcca cgggatcgag
      961 acgtttaatg tcctccgggg cggcgagtac ttcttcatac cgagcctgtc cgccctgaga
     1021 tggttgggcg agctggagtg acttccatcg tcccgtacgt tcaggagcga tcccatgacc
     1081 gggcaatcga tccgaccgca gttccgcact atcgacggcc tgtccattcg ctacgccgag
     1141 agtgagccgc gggacgacca cgcgctcttg ctgagcccgt ggccggagag catttactgc
     1201 tacgagccca cctggcatcg gttggcagag cagacccatc tcgtggcgat cgacttgccg
     1261 ggattcgggc agtccgagtg ccgcgattcg ttgatgtcgc caagagcgat gggcgaattc
     1321 gtcgctcgag tcgccgacgc gttcggcctg gagcagccac acgttgtggg gcccgacgtc
     1381 ggaacggcag cgtcgctctt cgccgcagcg ctgtatccgg atcggttccg cagcctcgtt
     1441 gtcggcacgg gcggcaccgc ggtcccgctt cagctgagcg gcgtgctcaa ggaatgggtt
     1501 gaggcgccga gcatcgagcc ctatcgcaag atcgacggac gccagattgt gaccgccgcg
     1561 attgcgaccc tcgagcggtt caagccaacg gaggccgccc gccaggacta tctcgcatcc
     1621 tacgaaggcg agcgctttgc cgagtcgatg cgctacgtac gcaattaccc ggagcagctg
     1681 ccgatcctgc gcgatctatt gcccacaatc aaaacgccgg tcctgatcat caacggcgcg
     1741 agagaccctg tggtgccgcc cgttaacgcc gagtatctcc atgagcggct gcccaggagc
     1801 acgctcaatt tcatcgacgc tggacacttc atctgggaag acgcagccga tacctacgcg
     1861 gcgctggtca cgagctggtg ggccggaggc tatacgagag ccggctgcgg ggtgcaccaa
     1921 tgaaccgtga tcgccgccac tttttgggaa ccaccctgat gaccctcacc gctgctcagc
     1981 tcagtacgac cgctcttgcg cgggccggca cgacaacgcc cgcgcagctg ccctcggtta
     2041 agccggggac gagtgtgtcg ttcacctcgc tgaaacagat cgacgccggg ctcttgaacg
     2101 ttggatacgc cgaagcggga ccgatcgacg gacctccagt ccttcttctg cacggctggc
     2161 cctatgacat tcacacgtac gtcgatgtaa ctcccttgtt ggcgtcggca ggctaccgcg
     2221 tgatcgtccc gcatctgcgc ggctatggca ctacgcgctt tctttcagct gagacgttac
     2281 ggaatggtca gccctcggcg ctcgcactcg atgccatcgc gttgatggat gcgctcaaga
     2341 tcgagaaggc gattgtcgct ggttgtgact ggggcgcgcg aacggccgac atcgtcgcgg
     2401 cgctctggcc cgaacgctgc aaggctctcg tctcggtaag cgggtacctg attggcagcc
     2461 aggcactcgg caagacacca ctgccaccaa aggccgagct ccaatggtgg taccagtatt
     2521 actttgccac cgaacgcggc cgggccggct acgacaagta tcggcgcgat tttgccaagc
     2581 tcatctggca aattgcatca ccgaagtggg acttcgatga cgcgacgttc gaacggagcg
     2641 ccgcggcgct ggagaacccc gaccacgtca gcatagtcat ccacaactat cg
//
LOCUS       DATCWM010000548         2582 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_527837, whole genome shotgun sequence.
ACCESSION   DATCWM010000548 DATCWM010000000
VERSION     DATCWM010000548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2582
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_527837"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..206
                     /locus_tag="VIQ50_10755"
     CDS             <1..206
                     /locus_tag="VIQ50_10755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360903.1"
                     /translation="HPAEIAEALSRNERQEDEARPNEAVKHNVRGRKAECDAMPRRDE
                     TGRPEQGGASAAGDAQNIRLYCL"
     gene            416..2089
                     /gene="ybaL"
                     /locus_tag="VIQ50_10760"
     CDS             416..2089
                     /gene="ybaL"
                     /locus_tag="VIQ50_10760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaL family putative K(+) efflux transporter"
                     /protein_id="HEY9360904.1"
                     /translation="MPHYTPLISTIVVALVLAFAFGVLAHRLRFSPLVGYLLAGILIS
                     PFTPGYVADQGLANELAEIGVILLMFGVGLHFSLEDLLSVGRIAVPGAIAQIASATLL
                     GMALGWGLGWPMSTGFVFGLALSVASTVVLLRAMHERRLLETERGRIAVGWLIVEDIA
                     MVFTLVLLPALAPALKEGAALSLSALAFPVAVTLGKVAAFIAIMLIVGRRLIPWILHY
                     VAHTGSRELFRLCVLAIALGVAFGAAILFDVSFALGAFFAGMILSESELSQRAASETL
                     PLRDAFAVLFFVSVGMLVDPMIVTRDPLVLLATVLIIVVGKSLAAFFIVRLFGHPTST
                     ALTIAASLAQIGEFSFILAGLGVELTLLPERGRDLILSGAIVSILLNPLFFAALDWWL
                     ARKEVGAAAADASIGRTETAAREPVPLSRLTDHVVLVGHGRVGSFISAALPAQTALLV
                     IENDADRIAAFAGEGREAIVGNAADPEVIRAVNLAAARCLLVAIPDAFEGGQVVAQAR
                     ELNPDLPIIARAHSEVEIDHLRKHGATKVVMGEHEIAKAMVVDILPRPA"
     gene            2254..>2582
                     /locus_tag="VIQ50_10765"
     CDS             2254..>2582
                     /locus_tag="VIQ50_10765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011090889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEY9360905.1"
                     /translation="MASLDAVSIGILLGALLVLAGIMSSLVAMRFGAPLLLVFLIVGM
                     LAGEDSLGGVRFDDVRTTYVVGSIALALILFDGGLRTRFATFRSVLGSAVTLATVGVL
                     VTAALTAP"
BASE COUNT          372 a          846 c          835 g          529 t
ORIGIN      
        1 cccaccccgc cgagatcgcc gaagccttgt cgcgcaacga acggcaggaa gacgaggccc
       61 gcccaaacga agcggtgaaa cacaatgtcc gcgggcgaaa agccgagtgc gatgccatgc
      121 cgcgccgcga cgaaaccggc cgcccagaac agggcggcgc cagtgccgca ggcgatgccc
      181 aaaacatcag actctactgt ctctgacccc gagaagggtg gacgcggctt tctcacggag
      241 ttcattctcg cgaatcgatc gccgcgacgg catccgccgc cgcggcgaat ggtaccattg
      301 tgatggcttg tcggcccgac gccatcgtct gacgtatttc gccgcagccg gatcaaagga
      361 caagtcgcag cgccgccgtt atgactgggc cggaccacca gctccggaac ttccgatgcc
      421 gcactacacg ccgctgatct cgaccattgt ggttgccctg gtgctcgcgt tcgcattcgg
      481 ggtgctggcg catcggctgc gcttttcgcc gctcgtcggc tacctccttg ccggcatcct
      541 gatcagcccg ttcacgcccg gatacgtcgc ggaccagggg ttggccaacg agctggccga
      601 gatcggcgtg atcctcctga tgttcggggt aggcctccat ttctcgctcg aagacctgtt
      661 gtcggtggga cgcatcgcgg ttcccggagc tatcgcgcag atcgcaagcg ccacgctgct
      721 cggcatggct ctggggtggg ggctcggctg gcccatgagc acgggctttg tgttcggcct
      781 tgcattgtcg gtggcgagca cggtcgtgct cctgcgcgcg atgcatgagc ggcgcctgct
      841 cgagaccgag cgcggtcgca tcgcggtggg ctggttgatc gtcgaagaca tcgccatggt
      901 cttcaccctg gtgctcctgc cggcgctcgc tcctgcgctc aaggagggcg cggcgctgag
      961 tctatcggcg ctcgcattcc cggtcgcggt cacgttgggc aaggtcgcgg ctttcattgc
     1021 catcatgctg atcgtaggca ggcgtttgat cccttggatc ctgcactatg tggcccatac
     1081 cgggtcgcgc gagctgttcc gcctgtgcgt gctcgccatc gcgctcggcg ttgccttcgg
     1141 cgcggcgatc ctgttcgacg tctcattcgc gctgggcgcg ttctttgccg gcatgatctt
     1201 gagcgagtcc gagctgagcc agcgcgccgc ctccgagaca ctgccgttgc gcgacgcctt
     1261 cgccgtgctg ttcttcgtct ccgttgggat gctggtcgat ccgatgatcg tgacgcgcga
     1321 tccgctcgtc ctgctggcga ccgtgctgat catcgtggtt ggaaagtcgc tcgctgcgtt
     1381 cttcatcgtg cgattgttcg gtcatcccac gtccactgcg cttaccattg ccgcgagctt
     1441 ggcgcagatc ggcgagtttt cattcatcct cgccggcctt ggggtcgagt tgacgctgct
     1501 gcccgagcgc ggccgtgatc tcatcctttc cggcgccatt gtttcgattc tgctcaatcc
     1561 actgttcttt gccgcgctcg actggtggct ggcaagaaag gaagttggag cggcagcggc
     1621 cgacgcttcg atcggccgaa cggagaccgc tgcccgcgaa cccgttccac tcagccgtct
     1681 caccgatcat gtggtgctgg tgggccacgg ccgcgttggc agcttcatca gcgcggctct
     1741 cccggcccag accgcgctgc tggtgatcga aaacgatgcc gacaggattg ccgccttcgc
     1801 aggcgagggg agggaggcga tcgtcggcaa tgccgccgac cccgaggtga ttcgggcggt
     1861 gaatctcgcg gccgcgcgct gcctcctcgt tgcgatcccc gatgcgttcg aaggcggcca
     1921 ggtggtggcg caggctcgcg aactcaatcc cgaccttccc atcatcgcgc gcgcccattc
     1981 cgaggttgaa atcgaccatc tcaggaagca tggcgccacc aaagtggtga tgggagagca
     2041 cgagattgcc aaggcgatgg tcgtcgatat tctgccccga cccgcctgac cacgcacggc
     2101 cgatctccgc atcgcccggc ggctcctcct ggtggctgct tgaatgtcac cccctgcgcc
     2161 gcggtgagga gaaaaattcc gcgcgtgcgg aatgtttagc attgccgctg cgccgtccag
     2221 cctttccaat aggaggcagg gactcgctcg accatggcct ctctcgacgc cgtcagcatc
     2281 ggcatcctgc tcggtgcgct cctggttttg gccgggatca tgtcgagcct cgtagccatg
     2341 cgcttcgggg cgccgctgct gctggtgttc ctcatcgttg ggatgctcgc aggcgaggac
     2401 agcctgggcg gcgtcaggtt cgacgacgtg cgcaccactt acgtggtcgg ctcgatcgcg
     2461 ttggcgctga tcctgttcga cggcggtttg cgcacgcggt ttgcgacctt ccgcagcgtg
     2521 ctggggtcgg cggtcacgct cgcgaccgtc ggggtattgg tgaccgcagc gttgaccgcg
     2581 cc
//
LOCUS       DATCWM010000549         2034 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_425022, whole genome shotgun sequence.
ACCESSION   DATCWM010000549 DATCWM010000000
VERSION     DATCWM010000549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2034)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2034)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2034
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_425022"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..231
                     /gene="rlmJ"
                     /locus_tag="VIQ50_10770"
     CDS             <1..231
                     /gene="rlmJ"
                     /locus_tag="VIQ50_10770"
                     /inference="COORDINATES: protein motif:HMM:NF016278.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HEY9360906.1"
                     /translation="ALARRLRQSGMAKILRAELSVAAPRAAARLSACGLIVINPPWTL
                     AGELATLLPELTAVLSGASDGAHRVNWLAGES"
     gene            422..637
                     /locus_tag="VIQ50_10775"
     CDS             422..637
                     /locus_tag="VIQ50_10775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEY9360907.1"
                     /translation="MAMAGTVKFFNAERGYGFIKPDDGGRDVFVHVTAVERAGLKSLT
                     EGQRLSFDVEPDKKGKGPKAVNLVITG"
     gene            728..1336
                     /locus_tag="VIQ50_10780"
     CDS             728..1336
                     /locus_tag="VIQ50_10780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEY9360908.1"
                     /translation="MLTLRSSPASPFVRKVRIAASVLGLERDIAIEPADTMNPSDTVR
                     RQNPLGKIPALVLEDGTVLFDSRVILDYLDHRAGGGRIVPTDAGARFSALRLQALADG
                     LMDASVLLVYEGRWRPAERHEPKWVGHQADKVARALAALEAAPPALTAPPDVGQIALA
                     CALGYRDFRFEGKWRGDHPRLVDWLEGFAARVPAFAATKPQG"
     gene            complement(1405..>2034)
                     /locus_tag="VIQ50_10785"
     CDS             complement(1405..>2034)
                     /locus_tag="VIQ50_10785"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein"
                     /protein_id="HEY9360909.1"
                     /translation="VALLALAGGSATAADLSPYYQPGPAYNPIYTWTGFYLGINGGGG
                     WGRSQWDALDTFDLSGGVIGGTVGYNWQFGQAVIGAEGDIDWSGIKGTSTVLCLGGCE
                     TRNKWLATARGRVGFAFDRFLPYFTGGLALGDISATPPVLPGGSITNVGWTVGAGLEV
                     GLVSNVSVKAEYLYVDLGNFNCGLNCALAPSGNVSFTTSIFRAGANVRF"
BASE COUNT          339 a          665 c          681 g          349 t
ORIGIN      
        1 gcgctggcac ggcgcttgcg ccagagcggc atggccaaga tcttgcgcgc cgaattgagc
       61 gtcgccgcgc cgcgcgcggc ggcgagactt agcgcgtgcg gcctgatcgt gatcaacccg
      121 ccgtggacgc tcgccggcga gcttgcgacg ttattgccgg agcttacggc cgtcctctcc
      181 ggagcaagcg atggtgccca ccgcgtcaat tggctcgctg gcgaaagcta gtttcaccac
      241 ttttccacag cgccggattg gcctattttt atcgggctgg ctttgacgtt ccgcctcctg
      301 tgggggccgg cggagtaagg gaggccgtaa ggccgctgct ttccccgttt gcgaatgtcc
      361 ggccgagccg ccgcgccgtt ggggtcggcg gcggagcaac cacggggaaa ggagtttccc
      421 gatggccatg gcaggtacgg tcaagttctt caatgccgag cgcggctatg gcttcatcaa
      481 gccggacgac ggcggccgcg acgtgttcgt gcacgtcacc gccgtcgagc gggccgggct
      541 caaatcgttg accgagggac agcgcctctc cttcgacgtc gagcccgaca agaagggcaa
      601 gggtccgaag gccgtcaacc tcgtgatcac cggctgatcg gcgagaccgc cggtcgctgg
      661 agcgctggcg gcgcaagccg ctgcccgcgg atccggtccc catcacccga agacatatgg
      721 tgtcgccgtg ttgacgctgc gcagctctcc cgcctcgcct ttcgtccgta aggtgcgcat
      781 cgccgcgagc gtgctcggcc tcgagcgcga catcgccatc gagcctgcgg atacgatgaa
      841 tccgagtgac acggtgcgcc ggcagaatcc cctcggcaaa attccggcgc tcgtgctcga
      901 ggacggcacg gtcctgttcg attcacgggt gatcctggac tatctcgatc accgcgcggg
      961 cggcggccgc atcgttccga ccgatgccgg cgcgcgcttt tccgcgttgc gcctgcaggc
     1021 gctcgccgat ggtttgatgg atgcttcggt ccttctggtc tacgaaggcc gttggcgtcc
     1081 agccgagcgg cacgagccga aatgggtcgg tcatcaagcc gacaaggttg cgcgtgcgct
     1141 cgcggcactc gaagctgctc cgcctgcgct caccgcgccg ccggacgtcg gtcaaatcgc
     1201 gcttgcttgc gcgctcggct accgcgattt ccgcttcgag ggaaagtggc ggggcgatca
     1261 tccacgcctg gtcgactggc tcgagggctt tgccgcgcgc gtgccagcgt tcgccgcgac
     1321 caagccgcag ggctagcgaa cggtgaaaac gataagcccc ggagcggaag tccggggctt
     1381 atccatgcgc tgcgccggct agacttagaa ccgcacgttg gcgccggcgc gaaagatgct
     1441 ggtggtgaag gagacattgc cgctgggcgc gagagcgcaa ttgagtccgc agttgaagtt
     1501 gccgagatcg acgtaaagat actcagcttt cacgctcaca ttgctcacca acccgacttc
     1561 caggccggcg ccgacggtcc agccgacatt ggtgatgctg ccgcccggca agaccggggg
     1621 ggtggcgctg atgtcgccaa gcgcgagacc gccggtgaag tagggcagga agcggtcgaa
     1681 ggcaaaaccc acccgcccgc gggcggtggc gagccacttg ttgcgcgtct cgcacccccc
     1741 aagacacagc accgtgctcg tccctttgat gcccgaccag tcgatgtcgc cttcggctcc
     1801 gatcacagct tggccgaact gccagttgta gccgacggtg ccgccaatga cgccgcccga
     1861 gagatcgaac gtatccagcg cgtcccactg ggaacggccc caaccgccgc cgccgttgat
     1921 gccgagatag aagccggtcc aggtatagat tggattgtag gcgggtcccg gctggtaata
     1981 gggcgacaga tcggcggccg tggccgagcc tccggccagc gccaatagag ccac
//
LOCUS       DATCWM010000550         2510 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_473522, whole genome shotgun sequence.
ACCESSION   DATCWM010000550 DATCWM010000000
VERSION     DATCWM010000550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2510
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_473522"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..858
                     /locus_tag="VIQ50_10790"
     CDS             <1..858
                     /locus_tag="VIQ50_10790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011471268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEY9360910.1"
                     /translation="IEVFKPSMRARQSDRVTLESELRRAFEREEITILYQPIVRLEDR
                     SVAGFEAMPRWRHPKVARASSAEFIAMAEEVGLIVDLGMFVTERAARQLSGWQRAVRR
                     RDPLFVSVNLSSRQLLRQDLVHDLRTVIARAGLARGTLKLELTESLVMENPEHTAQML
                     QRIRDVGAGLTLGDFGSGHASLAYLQRFPFDTIKIGHSFVRTNGKGARPVILRSLVAL
                     AHDLGMEVIAQGAETDSDAVELYQLGCEYAQGVCFGEPMSGDDAKALLQDDGASEESE
                     LALGKQGVQ"
     gene            complement(871..1584)
                     /locus_tag="VIQ50_10795"
     CDS             complement(871..1584)
                     /locus_tag="VIQ50_10795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HEY9360911.1"
                     /translation="MKFPRKTSVQDDGDALAGDDFDAPRPRGRSAHKPAKSKQPGKSS
                     KRGYLDGQMLIAMPSMGDDRFVRSVIYVCAHSTEGAMGIVVNQPAAHISFADLLVQLE
                     VIPAAELIKLPREAGGVKVLKGGPVDTQRGFVLHSSDFFIENATLPIDEGICLTATLD
                     ILKAIARGEGPQSAILALGYAGWAPGQLENEIQHNGWLHCTADAELIFGQDTGGKYEK
                     ALRKIGIDLGMLSSEAGHA"
     gene            1798..>2510
                     /locus_tag="VIQ50_10800"
     CDS             1798..>2510
                     /locus_tag="VIQ50_10800"
                     /inference="COORDINATES: protein motif:HMM:NF022853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD
                     domain-containing protein"
                     /protein_id="HEY9360912.1"
                     /translation="MTIGFNRLRRTAAPRAIAIWAMSLLAAGNATAGDDASRWDGDAR
                     SALRLIAGSSATPERAPPRAGIEIRLKNGWHTYWRYPGDAGVPPRFDFAGSQNVKSVE
                     VLWPAPQRIPEQGLVAIGYTGDVILPLAVVPQNSGEPVKLRLKLDYAVCEMLCVPAEG
                     KAELTLSGGPSSHDAALAAAEARLPHKSALGEGAALAIKSVRREEAGGRARILVDVAA
                     PPAAAIALFAEGPTPEWALP"
BASE COUNT          421 a          820 c          803 g          466 t
ORIGIN      
        1 atcgaagtgt tcaagccatc catgcgggcg cggcaaagcg accgggtgac gctggaatcc
       61 gagttgcggc gggcgttcga acgcgaggaa atcacgatcc tctatcagcc tatcgtgcgc
      121 ctcgaggacc gctccgtcgc cggctttgag gcgatgccgc gctggcgcca tcccaaggtg
      181 gcccgcgctt cgtccgccga attcatcgcc atggccgagg aggttggcct gattgtcgat
      241 ctcggcatgt tcgtgaccga gcgtgccgcc cgccagctga gcggctggca acgcgccgtg
      301 cgccggcgcg atccgctgtt cgtcagcgtc aatctgtcgt cgcggcagct gctgcggcag
      361 gatctcgtcc acgatctgcg cacggtgatc gcccgcgcag gacttgcgcg cggcacgctg
      421 aagctcgaac tcacggaatc gctggtcatg gaaaatccgg agcatacggc gcagatgctg
      481 cagcgtattc gcgacgtcgg cgccggcttg acgctcggcg actttggcag cggtcacgcc
      541 tcgctcgcct atctgcagcg gtttccgttc gacaccatca agatcggcca ctcgttcgta
      601 cgcacgaatg gcaagggggc gcgtcccgtc atcctgcgct cgctcgtcgc gctcgcgcac
      661 gatctcggca tggaagtcat cgcccaaggc gccgaaaccg attcggatgc ggtcgagctc
      721 tatcagctcg ggtgcgagta tgcgcagggc gtttgtttcg gcgagccaat gagcggcgac
      781 gacgccaagg cgctgctgca ggacgacggt gcgagcgaag agagtgagct ggcgctcggc
      841 aagcagggcg ttcaatagta ctcgcgtttg ctaggcgtgc cccgcctcgc tcgagagcat
      901 accaagatcg atcccgatct tcctcagtgc cttctcgtat ttgccgccgg tgtcttggcc
      961 gaagatcaac tcggcgtcgg ccgtgcaatg cagccagccg ttatgctgga tctcgttctc
     1021 gagttggccc ggcgcccaac cggcatagcc gagggcaaga atggcgcttt gcggcccctc
     1081 gccgcgggca atggccttga ggatgtccaa tgttgcggtc aggcagatgc cttcgtcgat
     1141 cggcaacgtg gcgttctcga tgaagaagtc gctggaatgc agcacgaagc cgcgctgggt
     1201 atcaaccggt ccgcccttga gcaccttcac gccccccgcc tctctcggaa gcttgatcag
     1261 ctccgccgcc gggatgacct caagctgcac cagaaggtcg gcaaagctga tatgcgccgc
     1321 cggctggttg accacgatgc ccatcgcgcc ctcggtcgag tgcgcgcaaa cataaataac
     1381 gctgcgaacg aatcggtcat cgcccatcga cggcatcgcg atcagcatct gcccatcgag
     1441 atagccgcgc ttggaactct tgcccggctg cttggatttt gccggtttat gcgcgctcct
     1501 cccccgcggc cgaggcgcgt caaagtcgtc gccggccaac gcgtcgccat cgtcttgcac
     1561 gcttgtcttg cgaggaaact tcatggcgaa atgctacctg attgagcgcg gattgcaaac
     1621 gacgtgagcc cgcatgtcca tgcatggttt gtgccatgat tgcagacacg cgcggtaggc
     1681 gtgtgtcgtt tttatgtatg tttccatgca ccttcgcgcg ccggtccgtt ccactcacca
     1741 cccgctcacg atgaattcag tggcgcagca aaagtttcgc tcctagatcg agccagcatg
     1801 accatcggct ttaatcggct gcggcggacc gccgcgcccc gtgcaatcgc catctgggcg
     1861 atgagcctcc tcgccgccgg caacgcgacc gccggcgatg acgcttcgcg ttgggacggc
     1921 gacgcccgaa gtgccctgcg cctcattgcg ggttcctcag cgacgccgga gcgagcgccg
     1981 ccccgcgccg gaatcgagat caggctcaag aacggatggc acacgtactg gcgttatccg
     2041 ggcgatgccg gcgtgccgcc acgcttcgat tttgcgggat cgcagaacgt caagtcggtc
     2101 gaggtgctct ggcccgcgcc gcaacgcatc cccgaacaag gtctggtggc gatcggatat
     2161 accggcgacg tcatcctgcc gctggcggtc gtaccgcaaa acagcggcga gccggtcaag
     2221 ctgcgtctca agctcgacta tgcggtttgc gagatgctgt gcgtcccggc cgaaggcaag
     2281 gctgagttga cgctgagcgg cggtccttcc tcgcatgacg ccgcgctcgc cgcggccgag
     2341 gcacgccttc cgcacaagtc cgcgctgggc gaaggcgcgg cgcttgccat caaatcggtt
     2401 cggcgcgagg aggccggcgg tcgagcgcgc attctcgtcg acgtggcagc gccgccggca
     2461 gcggcgatcg cgctcttcgc cgaaggtccg acgccggagt gggcgctgcc
//
LOCUS       DATCWM010000551         2644 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_392355, whole genome shotgun sequence.
ACCESSION   DATCWM010000551 DATCWM010000000
VERSION     DATCWM010000551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2644)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2644)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2644
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_392355"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(37..1293)
                     /gene="mtaB"
                     /locus_tag="VIQ50_10805"
     CDS             complement(37..1293)
                     /gene="mtaB"
                     /locus_tag="VIQ50_10805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019964395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase MtaB"
                     /protein_id="HEY9360913.1"
                     /translation="MSDIELITFGCRLNAYESEVMREHANAAGLNDAVIVNTCAVTAE
                     AVRQARQAIRKARRERPNAKIVVTGCAAQIDPSRFAAMDEVDHVIGNQEKTECRTFES
                     LSAEGTERVLVNDIMSVRETAGHLIEGFGSRARAYVQIQNGCDHRCTFCIIPFGRGPS
                     RSVPAGEVVAQVGRLVENGYAEIVLTGVDITAYGADLPGEMTLGKLVRKVLMLVPELP
                     RLRLSSIDSVEADSALLAAIAEEERLMPHLHLSLQSGDDLTLKRMKRRHARADSVRFC
                     QEVRRARPDMVFGADLIAGFPTETEIMFRNSLSLVDECGLTFLHVFPFSAREGTPAAR
                     MPQVNGRTVARRASELRAKGVAALKSHLEAAKGRRIQVLMESAGQGRSSDFTPVKLEA
                     HEGAGALVDAVVSGDDGGSLLAVRAP"
     gene            complement(1325..2182)
                     /gene="dapF"
                     /locus_tag="VIQ50_10810"
     CDS             complement(1325..2182)
                     /gene="dapF"
                     /locus_tag="VIQ50_10810"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HEY9360914.1"
                     /translation="MQARTIPFRKMNGLGNDFVVLDARARSLALDENAVRAIADRKEG
                     IGCDQLIALEPSARADVFMRIWNADGGEVGACGNAARCVASLVAAERGEPHVSIETES
                     GMLDAAVNRDGSVTIDMGTPRFAWNEIPLAQRFDDTRRIALDADDPALNSPAVVNVGN
                     PHCLFFVDDVAAHDLARLGPVLEHHKLFPERANISLVQVLAPDAIKVRTWERGAGLTR
                     ACGTAACAAAVASAQRELTGRKVKVSLPGGDLLIEWRESDGHILMTGPYALDYESTLP
                     AELFQPASV"
     gene            complement(2206..>2644)
                     /locus_tag="VIQ50_10815"
     CDS             complement(2206..>2644)
                     /locus_tag="VIQ50_10815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018240161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9360915.1"
                     /translation="VYAASAYPAGWLQDRIGARPLLLSGLVALIAADLLLAFGQTLLA
                     VFIGICLWGLHMGLTQGVLAALIAETAPIRLRGTAFGLFGLITGLAALLASIIAGLLW
                     DRIGASATFLAGAAFTAAAFAAFLLVRHAPTGLAGSQRPTRPI"
BASE COUNT          491 a          875 c          853 g          425 t
ORIGIN      
        1 acagccgctc gaacaggccc ggctttctcc cttgagtcac ggcgccctca cggccagcaa
       61 agagccgcca tcgtccccgg agaccacagc atcgaccagc gcgccagcac cttcatgcgc
      121 ctcgagcttg accggcgtga aatcggacga gcggccctgc ccggcgctct ccatgagcac
      181 ctggatgcgg cggcccttgg cggcctcaag atgcgacttc agagccgcaa cgcctttggc
      241 gcgcagctcg cttgcgcggc gcgcgaccgt gcggccattg acctgaggca tgcgtgccgc
      301 cggcgttccc tcccgcgccg agaaggggaa cacgtgcagg aacgtcagac cgcactcgtc
      361 gacgagggac agcgagttac ggaacatgat ctcggtctcg gtggggaagc ctgcgatcag
      421 gtcggcgccg aacaccatgt ccggcctcgc gcgccgcacc tcttggcaga agcgcaccga
      481 gtcggcgcga gcatgccgcc gcttcatacg cttgagcgtg aggtcgtccc cggattgcag
      541 cgagagatgg agatgcggca tcagccgctc ctcctcggca atcgccgcga gcagcgccga
      601 atcggcctcg accgagtcga tcgacgagag tctaagccgc ggaagctccg gcacgagcat
      661 gagcaccttc cgcacgagct tgccgagcgt catttcgccg gggagatcgg cgccatatgc
      721 ggtgatgtcg acgccggtca gcacgatctc ggcatagccg ttctcgacca gccgccccac
      781 ttgcgcgacc acctcacccg ctggcacaga gcgcgacggc ccgcggccga acgggatgat
      841 gcagaaggtg cagcgatggt cgcagccgtt ctggatctgc acgtaggcac gggcgcgact
      901 gccgaagcct tcgatcagat gtcccgcagt ctccctgacc gacataatgt cgttgaccaa
      961 gacacgctcg gtcccttcgg cgctcaagct ctcgaaggtc cgacactcgg tcttttcctg
     1021 attgccgatg acgtgatcga cctcgtccat ggcagcgaag cgcgatggat cgatctgcgc
     1081 cgcacagcct gtcaccacga tcttggcatt gggacgctcg cgccgcgcct tcctgatcgc
     1141 ctgccgcgcc tggcgcacgg cctccgccgt caccgcgcag gtgttgacga tcaccgcgtc
     1201 gttgaggccc gcggcgttgg cgtgctctcg catgacctcc gactcatagg cattgagcct
     1261 gcagccgaag gtgatgagct cgatatccga cattggcggc ttctaacacg aaactcttga
     1321 gaaactaaac acttgccggt tggaatagct ccgcgggcag cgtgctctca tagtcgagag
     1381 cataagggcc ggtcatcagg atgtgaccgt ccgactcccg ccattcgatc agaagatcgc
     1441 cgccgggaag gctaaccttc accttgcggc cggtgagctc tcgctgtgcc gatgcgacgg
     1501 cagcggcgca ggcagcagtg ccgcaggccc gcgtcagccc ggcgccacgc tcccaggtgc
     1561 gaactttgat ggcatcaggc gcgagcacct gcacgagtga gatattggcg cgctcaggga
     1621 acagcttatg gtgctcgagc accggtccca aacgtgcgag gtcgtgggcc gccacatcat
     1681 ccacgaagaa caggcaatgc gggttgccga cattcaccac cgccggcgaa ttgagtgccg
     1741 ggtcgtcggc atcgagcgcg atgcggcgcg tgtcgtcgaa ccgctgcgcc agcggaatct
     1801 cgttccaggc aaaccgaggc gtgcccatat cgatcgtgac gctgccgtca cggttcaccg
     1861 ccgcgtcgag catcccgctc tcggtctcga tgctaacatg cggctcgccc cgttccgcgg
     1921 cgacgagcga agcgacgcag cgcgcggcgt ttccgcaagc tccaacctcg ccgccatcag
     1981 cattccagat gcgcatgaac acatcggccc gcgccgaggg ctcgagcgca atgagctgat
     2041 cgcagccgat gccttccttg cggtcggcga tggcgcgcac ggcattctcg tcaagcgcaa
     2101 gcgagcgagc gcgggcatcg agcacgacga agtcgttgcc gagtccgttc atcttgcgga
     2161 agggtatggt ccgagcctgc atgagagcgc ctgagtttgc tcgctctata tagggcgagt
     2221 aggtcgttga cttccagcga ggccggttgg cgcgtgcctc accagcagga aggcggcgaa
     2281 cgcggcagcg gtgaaggctg caccggcaag gaaggtggcg gaggcgccga tcctgtccca
     2341 gaggaggccg gcgatgatgc tggcgagcaa agcggcaagt ccggtgatca ggccgaacag
     2401 cccaaatgcc gtgccgcgga ggcgtattgg cgctgtctcc gcaatcaggg ccgcgagcac
     2461 gccttgggtc agacccatat gcagtcccca caggcagatg ccgataaaga cggcgagaag
     2521 cgtctggcca aaggcaagca gcaggtctgc ggcaataagc gcgacgaggc cggacagcag
     2581 cagaggccgc gcgccgatcc tgtcctggag ccagcctgcg ggataggcgc ttgctgcata
     2641 gacg
//
LOCUS       DATCWM010000552         3818 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_241532, whole genome shotgun sequence.
ACCESSION   DATCWM010000552 DATCWM010000000
VERSION     DATCWM010000552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3818)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3818)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3818
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_241532"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..546
                     /locus_tag="VIQ50_10820"
     CDS             <1..546
                     /locus_tag="VIQ50_10820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360916.1"
                     /translation="SSAPLPTEPAPKSDGAAEKGKGHIAPPSTVAEIITDLSRLPAPV
                     ARTRDRLLAAARSGDLKQLAGLMTDTLPVFSFTEDKDPIAFWKANYPDSDGVEVLSIL
                     TLILESGFVRVDEGTSQEMYVWPYFVRMSLGALTPRQKVELFRLVTGADYKDMMKLGV
                     YVFYRLGISPDGTWQFFVSGD"
     gene            647..1537
                     /locus_tag="VIQ50_10825"
     CDS             647..1537
                     /locus_tag="VIQ50_10825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007607211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein"
                     /protein_id="HEY9360917.1"
                     /translation="MKTALLPDRGVVKIAGDDARKFLNGLVTSDIAKVTPEAAAFGAL
                     LTPQGKIIVDFILAEAPAADGGGFFLDCPRALASTLLQRLNFYKLRAKVLIEDLSETL
                     GVLAVWDGDAATEYGLCYRDPRLAALGLRCMLPPHLASEAAADLGADLLESSTYEAHR
                     IALGVPRGGLDFIYGDAFPHESDMDQFGGVDFDKGCFVGQEVVSRIEHRGTARTRVVP
                     VAFDGFAPEAGTPVSVGDRTVGTLGSSAQGRALAMLRLDRAADALAAGEPLIAGGVEV
                     RLVKPPWAQFAWPGEAKAAE"
     gene            1534..2139
                     /locus_tag="VIQ50_10830"
     CDS             1534..2139
                     /locus_tag="VIQ50_10830"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014497312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008725 - DNA-3-methyladenine glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HEY9360918.1"
                     /translation="MSPPLLHPDGLKRCPWPKQDPLYVAYHDEEWGVPEYDDRALYEK
                     LILDGFQAGLSWITILRKRENFRRAFDGFEPEKIARYTPKKIEKLMQDAGIVRNRMKI
                     EGAVLSARGYLDVMEKGPGFSRLLWDFVGGKPKVNRFRSTSQVPAETPVSRAMSKELA
                     RRGFKFVGPSIVYAFMQATGMVNDHVVSCHRHAPLAALAGR"
     gene            2145..2765
                     /locus_tag="VIQ50_10835"
     CDS             2145..2765
                     /locus_tag="VIQ50_10835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD family hydrolase"
                     /protein_id="HEY9360919.1"
                     /translation="MPARARTVVSSAAFRAWQRMLSGRRLDLLDPSPLDVEIADIAHG
                     LARVARWNGQTEGAHIFSVAQHSLLVETIARQRARLDRASRLGVLLHDAPEYVIGDMI
                     SPFKAVIGDAYKAVEARLLGAIRLRFGLPAELPAELAALIKAADRAAAYLEATRLAGF
                     STSEARRFFGAPPKFSAVVERDYLVPWPAEVAERRYLDRFAKLARG"
     gene            2849..3355
                     /locus_tag="VIQ50_10840"
     CDS             2849..3355
                     /locus_tag="VIQ50_10840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015687897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein tyrosine phosphatase"
                     /protein_id="HEY9360920.1"
                     /translation="MIHVCSLARLHETVETTGALHVVTLMKDIDRLERPRSIAADNHL
                     ILTMDDISAPMDGYTIPCDEHVTALVTFVRGWDRAKPLVLHCYAGISRSTAAAYVAAC
                     ALNPGRDEGVIARELRRVSATATPNSRLVALADRMLGREGRMVAAIEGIGRGVIAYEA
                     DPFRLELE"
     gene            3545..>3818
                     /locus_tag="VIQ50_10845"
     CDS             3545..>3818
                     /locus_tag="VIQ50_10845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360921.1"
                     /translation="MYSNLRFVISASVVGCAGLIGVLALLPATFEERLLASAELSAPA
                     ARPCKQQNWLNLDRNCLTRRGMPWVAALPARGVAEVPASAETAAEQP"
BASE COUNT          622 a         1290 c         1239 g          667 t
ORIGIN      
        1 tcatccgcgc cgttgcccac cgagccggcg ccgaagagcg acggagccgc cgagaagggt
       61 aagggccata tcgccccgcc gtccacggtt gccgaaatca tcaccgatct ttcccgcttg
      121 cctgcgccgg tggcacgcac gcgcgatcgc ttgctcgcgg ccgcgcgcag cggcgatctg
      181 aagcagcttg cggggctgat gacggatacg ttgccagtct tctccttcac cgaggacaaa
      241 gatccgatcg ccttctggaa agcgaattac cccgactcgg acggcgtcga ggtgctctcg
      301 atcctgacct tgattctcga atccggcttc gtgcgggtcg atgaaggcac gtcacaggaa
      361 atgtacgtct ggccctattt cgtacgcatg tcgctcggcg cgctcacgcc gcggcaaaaa
      421 gtcgagctgt tccggctcgt caccggcgcc gactacaaag acatgatgaa gctcggcgtg
      481 tacgtcttct accgtctcgg gatctcgccc gacggaacct ggcagttctt cgtcagcggc
      541 gactgacgcg cggccagcct acgcactgcc gacgcgcaac tggcggcctt gtgacggcgc
      601 agcaaggcgc ttacgtttag ccgcgacatc ggtacgatca caaaccatga agaccgcgct
      661 gcttcccgat cgcggcgtcg tcaagatcgc cggcgacgac gcgcgcaaat tcctcaacgg
      721 actcgtgacc agcgatatcg ccaaggtgac gccggaagcg gcggcatttg gcgcgctgct
      781 caccccgcaa ggcaagatca tcgtcgattt cattctcgcc gaggcgccgg cagccgacgg
      841 cggcgggttc ttcctcgact gcccgcgcgc gctcgcctcg acgctgctgc agcggctcaa
      901 tttctacaaa ctgcgcgcca aggtcttgat cgaggacctg tccgagacgc tcggcgtgct
      961 cgcggtctgg gacggcgatg ctgcgaccga atacggtttg tgctaccgcg atccgcgcct
     1021 tgcggcgttg gggctgcgct gcatgctgcc gccgcacctt gccagcgagg ccgcggccga
     1081 cctcggcgcc gatctcctcg agtcctccac ctacgaggcc catcgcatcg cgctcggcgt
     1141 cccgcgcggc ggtctcgact tcatctatgg cgatgccttt ccgcacgaga gcgacatgga
     1201 ccagtttggc ggcgtcgatt tcgacaaagg ctgcttcgtc ggacaggagg tggtctcgcg
     1261 catcgagcac cgcggcaccg cgcgcacgcg cgtcgtgccc gtcgccttcg acggctttgc
     1321 gccggaggcc ggcaccccgg tgagcgtggg cgataggacc gtcggcacgc tcggctcgag
     1381 cgcccaaggc cgcgcactcg ccatgctgcg tctcgatcgc gccgccgacg cgctggcggc
     1441 gggagagccg ctcatcgccg gcggcgtcga agtgcggctg gtcaaaccgc cctgggcgca
     1501 attcgcatgg ccgggcgagg ccaaggccgc ggaatgagcc ctccccttct ccaccccgac
     1561 ggcctcaaac gctgtccctg gcccaagcag gacccgctct acgtcgccta tcatgacgag
     1621 gaatggggcg tgccggaata cgacgaccgc gcgctctacg agaagctcat cctcgacggc
     1681 ttccaggccg gattgtcttg gatcaccatc ctgcgcaagc gcgagaattt ccgccgcgcc
     1741 ttcgacggct tcgagccgga gaagatcgcg cgctacacgc cgaagaagat cgagaagctc
     1801 atgcaggacg ccggcatcgt gcgcaaccgc atgaagatcg agggcgcggt cctctccgcg
     1861 cgcggctatc tcgacgtcat ggagaagggg ccgggcttct cgcggctctt atgggacttc
     1921 gtcggcggca aaccaaaggt caatcgtttc cgctcgacct cgcaggtgcc ggcggagacg
     1981 ccggtgtcgc gtgcgatgtc aaaggagctg gcgcggcgcg gcttcaaatt cgtcgggccg
     2041 agcatcgtct atgccttcat gcaggcgacc ggcatggtca atgatcatgt ggtgagttgc
     2101 caccggcacg caccgttggc ggcgctggcg ggccgctgaa cgcgatgccg gcccgcgcgc
     2161 gaacggtcgt atcctccgcg gcgtttcgcg cctggcagcg catgctgtcc ggccgccggc
     2221 tcgacctgct cgacccctcg ccgctcgacg tcgagatcgc ggacatcgcc catggacttg
     2281 cgcgcgtcgc ccgctggaac gggcaaaccg agggcgcgca catcttctcg gtcgcccagc
     2341 attcgctcct ggtcgaaacc atcgcgcgac aacgcgcgcg cctcgaccgc gcgagccggc
     2401 tcggcgttct cctccacgat gctcccgaat acgtgatcgg tgacatgatc tcgccgttca
     2461 aggcggtgat cggcgacgcc tataaggccg tggaggcgcg cctgctcggg gcaatccgtt
     2521 tacgcttcgg gcttcccgcc gagttgcccg ccgagctcgc cgcgctgatc aaggcagccg
     2581 accgcgccgc cgcgtatctc gaggcgactc ggcttgccgg attttccaca agcgaagcgc
     2641 gacgcttctt cggcgccccg cccaaattct ccgccgttgt cgagcgcgac tatctggtgc
     2701 cctggccggc ggaggtggcc gagcggcgct atctcgatcg gttcgccaag ctcgcccggg
     2761 gctgaccgca tggaactttt gcaaacgaca ccttgatgtc gtcattggtg acctataaag
     2821 ggggcaaaga aactgcgtcg gcgacacaat gattcacgtc tgctcgctcg cgcgcctgca
     2881 cgagacggtc gaaacgaccg gcgcgctcca cgtcgtcacg ctgatgaaag atatcgaccg
     2941 cctggagcgg ccgaggagca tcgcggcaga caatcacctc atcctgacca tggatgacat
     3001 ctcggcgccg atggacggct atacgattcc ttgcgatgag catgtcaccg cactggtcac
     3061 cttcgtgcgc ggctgggacc gcgccaagcc gctggtgctg cattgctatg ccggcatcag
     3121 ccggtcgacc gcggcggcct atgtcgcggc ctgtgcgctc aacccgggcc gggacgaagg
     3181 agtgatcgcg cgcgagctgc gccgcgtctc ggcaacggcg acgccgaaca gccggcttgt
     3241 ggcgctcgcc gaccgcatgc tgggccgcga gggtcgcatg gtggcggcaa tcgaggggat
     3301 tggccgcggc gtaatcgcct atgaggcgga cccattccgg ctcgaactgg aataggtcgg
     3361 gtggaactcg cgcccgcgga actcggcgag cccgtgggcc tagtggctgg ccgggcgagt
     3421 tcccatgtta agcacggccg caatttccgc tgggatgaag gcggtcaggt cgacatagtg
     3481 ccgccacagc ggagttgttt ttgtgcaaca ggggggccga gatttccgat ctaggagaca
     3541 ggccttgtat tcgaacctgc gttttgtgat ctccgcctcg gtcgtcgggt gtgcaggtct
     3601 gatcggtgtg ctggcgctgc tccccgccac gttcgaggag cggctcctcg cgagcgcgga
     3661 gctttctgca ccggcagcgc gcccctgcaa gcagcaaaac tggctcaacc tcgatcgaaa
     3721 ctgcctcacg cgacgcggca tgccgtgggt ggcggctctg cctgcccggg gcgtggcgga
     3781 agttcccgct tctgccgaaa cagcggccga gcagcctt
//
LOCUS       DATCWM010000553         7211 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_452204, whole genome shotgun sequence.
ACCESSION   DATCWM010000553 DATCWM010000000
VERSION     DATCWM010000553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7211
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_452204"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..933
                     /locus_tag="VIQ50_10850"
     CDS             <1..933
                     /locus_tag="VIQ50_10850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HEY9360922.1"
                     /translation="ILPAHHEFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPV
                     KRPTAGIAMGLILEDQRYAVLSDILGDEDHLGDMDFKVAGTERGVTSLQMDIKIAGIT
                     EEIMRVALSQAREGRMHILGEMAKALVQHRAQLGEHAPRIEVFNIPVDKIREVIGSGG
                     KVIREIVEKTGAKIDISDDGTVKVASANGDAMKAAINWIKSIASEPEVGHIYEGTVVK
                     VMDFGAFVNFFGAKDGLVHISQLAPRRVQKVTDVVKEGDKVKVKLLGFDERGKVRLSM
                     KVVDQATGEDLEAKQKAEAEQHRDDQQREAASAE"
     gene            complement(1064..1903)
                     /gene="fabI"
                     /locus_tag="VIQ50_10855"
     CDS             complement(1064..1903)
                     /gene="fabI"
                     /locus_tag="VIQ50_10855"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011470830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HEY9360923.1"
                     /translation="MTQLMQGKRGLIMGVANDHSIAWGIARTLAAHGATLAFSYQGEA
                     LGRRVKPLAESVGASLLIPCDVEQTASLDATFAAIAEKWGSLDFLVHAIAFSDKNQLK
                     GRYADTTRENFVRTMIISCFSFTEAAKRAAALMPAGGSMLTLTYNGGQRAMPNYNVMG
                     VAKAALEASVRYLAVDFGPAAIRVNAISAGPIRTLAGAGISDARQMFAFQQRHSPLRR
                     GVTLEEIGGAALYLLSDLSTGVTGDVHFVDSGYNVIAMPHPTSLKDETAANERAIAKD
                     AAQ"
     gene            complement(1970..3187)
                     /gene="fabB"
                     /locus_tag="VIQ50_10860"
     CDS             complement(1970..3187)
                     /gene="fabB"
                     /locus_tag="VIQ50_10860"
                     /EC_number="2.3.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase I"
                     /protein_id="HEY9360924.1"
                     /translation="MRRVVVTGMGIVSSIGNNTQEVLASLREAKSGISRADKYAELGF
                     RCQVHGAPTLKAEEAIDRRAMRFLGGGAAWNHAAMEQAIRDAGLEENEISHERTGIIM
                     GSGGPSTRAIVEAADIARSKSPKRVGPFAVPKAMSSTASATLATWFKIKGVNYSISSA
                     CATSNHCIGNAAEVIQSGKQDIIFAGGCEELDWTLSVLFDAMGAMSSSFNQTPEKASR
                     AYDVDRDGFVIAGGAGVLVLEELEHAKARGGRIYGEVAGYGATSDGFDMVAPSGEGAV
                     RCMRMALNGVKAPVDYINPHATSTPIGDSKEIEAIREVFGERCPPIAATKSLTGHSLG
                     AAGAQEAIYSLLMMSNGFICESANIDNLDPAFADVPIVRERRDDVRLGCVLSNSFGFG
                     GTNASVMLKRLDV"
     gene            complement(3237..3767)
                     /gene="fabA"
                     /locus_tag="VIQ50_10865"
     CDS             complement(3237..3767)
                     /gene="fabA"
                     /locus_tag="VIQ50_10865"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019171 -
                     (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     FabA"
                     /protein_id="HEY9360925.1"
                     /translation="MANRRSSFGYDDLLACARGELFGAGNAQLPLPPMLMFDRISEIA
                     EAGGEYGKGLVRAVLDLKPDLWFFPCHFKGDPVMPGCLGLDALWQLLGFFLGWLGAPG
                     RGRALGLGELKFSGQVLPTVKKVVYGIDIKRVMRSKLVLGIADGWLSADGSIIYRAID
                     LKVGLFRDEMMQPSGG"
     gene            4034..4471
                     /locus_tag="VIQ50_10870"
     CDS             4034..4471
                     /locus_tag="VIQ50_10870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011155992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HEY9360926.1"
                     /translation="MPPRSTLTGCPWRDVKSMLRDVGLRPTRQRMALGWILFGKGDRH
                     VTAEMLYEEAVKAKVPVSLATVYNTLHQFTDVGLLRQVAVDGSKTYFDTNVSQHHHFF
                     IEGENDLLDIPDTDVVVGRTPIPPEGYEIARVDVVVRLRRKAR"
     gene            complement(4532..4969)
                     /locus_tag="VIQ50_10875"
     CDS             complement(4532..4969)
                     /locus_tag="VIQ50_10875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016844714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEY9360927.1"
                     /translation="MGLKSGLPMPRFVSLKPDRVNVRGGPTRDHEVMFVYTRAGLPVE
                     ITAESDNWRRIRDWEGSEGWVYHSLLSGRRTAVVTPKDKKELVPLYEKGDSSSPVIAR
                     LQAGVLAAIKRCSGSWCRIVGPGFDGWTLQERLWGVYPNENVE"
     gene            5284..6285
                     /locus_tag="VIQ50_10880"
     CDS             5284..6285
                     /locus_tag="VIQ50_10880"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008465 - glycerate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycerate dehydrogenase"
                     /protein_id="HEY9360928.1"
                     /translation="MAHRKRPLVVVTRKLPDSIETRMRELFDTQLNLDDKPMTPAELA
                     DMVKNADVLVPTVTDRIDASVLSKAGDKLKLIANYGNGVDHIDVATALSRGITVTNTP
                     GVLTEDTADMTMALILAVPRRLAEGAAMLSEDKPWPGWSPTWMLGHRIWGKRLGIIGM
                     GRIGQAVARRARAFGLQIHYHNRRRVPARIEEELTATYWESLDQMLARMDIISINCPH
                     TPATFHLLSARRLKIIRPQAYIVNTARGEVIDENALVRLIASGDVAGAGLDVFEHEPA
                     VNPKLVKLARIGKVVLLPHMGSATLEGRIDMGEKVIVNIKTFLDGHRPPDRVLPSML"
     gene            6373..6723
                     /locus_tag="VIQ50_10885"
     CDS             6373..6723
                     /locus_tag="VIQ50_10885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360929.1"
                     /translation="MRASLAAVVAILATATPVVAATLTPNEIQATFFTGQPFTASATN
                     VKYKMVFSADGKMTREPAGTAGSKSEGTWKLSKDGFCTTWKGSKSNCYRLLTAGDNKW
                     SVMQGATAVATWTK"
     gene            complement(6787..>7211)
                     /locus_tag="VIQ50_10890"
     CDS             complement(6787..>7211)
                     /locus_tag="VIQ50_10890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011470847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HEY9360930.1"
                     /translation="SDNFATRYLVSDACFFAKKPLVTAAVGVFDGTLTTIRAHERNAD
                     GTPNPTYRCLFPEPPPPGSVPACAEAGILGALTGVLGSLMALEVIREIVGFGEGLIGR
                     LLMFDARAMRFETLRYGWDPSNPLSGEHPTIKDLSLHA"
BASE COUNT         1408 a         2289 c         2251 g         1263 t
ORIGIN      
        1 atcctgccgg cgcaccacga atttccttat acgctgcgcg tcgtatcgga gatcacggaa
       61 tcgaacggct cttcctcgat ggcgacggtc tgcggtactt cgctcgccct gatggatgcg
      121 ggggtcccgg tcaaacgccc caccgcgggc atcgccatgg gtctgatcct cgaagatcag
      181 cgctatgccg tgctttccga catcctcggc gatgaggacc atctcggcga catggatttc
      241 aaggtcgccg gcaccgagcg aggcgtgacc tcgctacaga tggacatcaa gatcgccggc
      301 attaccgagg agatcatgcg agttgcgctc agtcaggcga gggaggggcg catgcacatc
      361 ttgggcgaaa tggcgaaggc cctggtccaa caccgtgccc agctcggcga gcacgcaccg
      421 cgcatcgaag tattcaacat tccggtcgat aagatccgcg aggtgatcgg ctccggcggc
      481 aaggtgatac gcgagatcgt cgaaaagact ggcgcgaaga tcgacatttc cgacgacggc
      541 acggtaaagg tggcatccgc aaacggcgac gcgatgaagg ccgcgatcaa ctggatcaag
      601 tcgatcgcct cagagcctga agtcggtcac atctacgagg gcaccgtggt caaggtgatg
      661 gacttcggtg cgttcgtgaa cttcttcggg gccaaggacg gtctcgtgca catcagccaa
      721 ctggcgccgc gccgggtaca gaaagtgacc gacgtcgtca aagaaggcga caaggtcaag
      781 gtcaagcttc ttggcttcga cgagcgcggt aaagtgcgcc tttcgatgaa agtcgtcgat
      841 caggcgaccg gcgaggatct ggaagcgaag caaaaggccg aggccgagca gcaccgcgac
      901 gatcagcagc gcgaagcggc gagcgcggaa taggtcacgc cgcgggcgcg cccggtgcgc
      961 gccgctcggc atacatcagt tctggccgag cgcaacgacg tgggactcgt cagcgccgac
     1021 gcgcatcaga ccgcttgctg acctgtaaat tgcaaggcgc gcgctattgc gccgcgtcct
     1081 tggcgatcgc ccgctcgttg gccgccgtct cgtccttgag cgaggtggga tgcggcatgg
     1141 cgatgacgtt gtagccggaa tccacgaagt gcacgtcgcc ggtcactccg gtcgaaagat
     1201 ccgaaagcag atagagcgcg gcccctccga tctcctccaa cgtcacgcct cgccgcaacg
     1261 gcgaatggcg ctgctggaag gcaaacatct gccgcgcatc gctgatgccc gcgccggcaa
     1321 gcgtgcggat cggccccgcc gaaatggcgt tgacgcgaat cgccgcgggg ccgaaatcga
     1381 cggcgagata gcgcacggac gcttccaggg ccgcctttgc aactcccatc acgttgtagt
     1441 taggcatcgc ccgctgtcca ccgttgtagg tcagcgtcag catcgaaccg ccggccggca
     1501 tcagtgccgc cgcgcgcttc gccgcttcgg tgaaagagaa gcaggagatg atcatggtgc
     1561 ggacgaaatt ctcgcgcgtg gtatcagcgt agcggccctt gagctggttc ttgtcggaga
     1621 aggcgatggc gtggacgagg aaatcaagcg agccccattt ctccgcgatg gcggcgaagg
     1681 ttgcgtcgag agaagcggtc tgctccacat cacagggtat caggagcgag gcgcccaccg
     1741 attccgccaa aggcttgacg cgtcggccca gcgcctcacc ctgatagctg aaggcgagcg
     1801 tcgcgccgtg agcggcgagc gtcctggcaa tgccccacgc gatggagtga tcgttggcca
     1861 cccccatgat caagccgcgc ttgccctgca tcaattgcgt catagtaccc gaacttgccg
     1921 ttccaccgcg cgcacctggc gcggacccga attgatcatc acgcgtccct caaacatcca
     1981 ggcgcttgag catcaccgag gcgttcgtgc cgccgaagcc gaacgagttc gagagcacgc
     2041 agccgagcct cacgtcgtcg cgccgctcgc gcacgatcgg cacgtctgcg aaagccggat
     2101 cgaggttgtc gatgttggcg ctttcacaga tgaagccgtt gctcatcata agcaaggaat
     2161 aaatcgcttc ctgcgcgccg gcggctccga gcgaatggcc ggtgagcgat ttcgtcgccg
     2221 cgatcggcgg gcagcgctcg ccgaagactt cgcggatcgc ctcgatctcc ttgctgtcac
     2281 cgatcggggt ggaggttgcg tgcggattga tgtaatcgac cggcgctttc acgccgttga
     2341 gcgccatgcg catgcaacgc accgcgccct ctcccgaggg agccaccata tcgaatccgt
     2401 cggaggtggc gccatagccg gcgacctcgc cgtagatgcg cccgccgcgc gccttggcgt
     2461 gttcgagttc ctccaacacc agcacgccgg ccccgccagc gatgacgaag ccatcgcggt
     2521 cgacatcata ggcgcgcgag gccttctccg gcgtctgatt gaaactcgag gacatggctc
     2581 ccatggcgtc gaacagcacg gagagcgtcc aatcgagctc ctcgcagccg ccggcgaaga
     2641 tgatgtcttg cttgcccgac tggatcactt ccgcagcgtt gccaatgcaa tgattcgagg
     2701 tcgcgcaggc cgacgagatc gaatagttga cacccttgat cttgaaccaa gtggcgagcg
     2761 tcgccgatgc agtcgacgac atagccttgg gaacggcgaa gggcccaacc cgcttgggac
     2821 tcttgctgcg ggcgatatcg gcggcctcga cgatggcgcg cgtcgaaggc ccgcccgagc
     2881 ccatgatgat gccggtcctc tcgtgtgaga tttcattctc ctcgagaccg gcatcgcgga
     2941 tcgcctgctc catggccgcg tggttccagg ccgcgccgcc gccgaggaag cgcatggcgc
     3001 ggcgatcgat tgcctcttcg gccttgagcg tgggcgcgcc gtgtacctga caacgaaagc
     3061 cgagctcggc atatttgtcg gcgcgcgaaa ttcccgactt cgcctcgcgc aggcttgcca
     3121 gcacttcctg ggtattgttg ccgatcgacg agacgatacc catcccggtg acgacgaccc
     3181 gtctcatgaa cgcctcgtcc gcatctcgac ccgcacagcg agcgcaaccg ccgtcgtcac
     3241 ccgccgctcg gctgcatcat ttcgtcgcgg aacagtccga ccttgaggtc tatggcgcga
     3301 tagatgatcg acccgtcggc cgagagccag ccgtcggcga tgcccagcac gagcttgctg
     3361 cgcatgaccc gcttgatgtc gatgccgtag accaccttct tgaccgtggg caggacctgg
     3421 ccggagaatt tcagctcgcc gagcccgagc gcacgtcccc tgcccggcgc gccgagccaa
     3481 cccaagaaga agcccagcaa ctgccacagc gcatcgaggc ccaggcagcc gggcatgacc
     3541 ggatcgcctt tgaaatggca gggaaagaac cacaggtcag gcttgagatc gagcacagca
     3601 cgaaccaggc ctttcccgta ctcgccgccg gcttctgcga tctcggagat gcgatcgaac
     3661 atgagcatgg ggggcagcgg cagctgggca ttgccggcgc cgaacagctc gccgcgtgcg
     3721 caggctaata ggtcatcgta tccgaagctg ctgcgccggt tcgccattcg ggtcctgtcc
     3781 gtggccgcct ggtaaatacc caaagcgtgg aactcctaac ataggcggcg cggggggcaa
     3841 agccagccaa cccggccaac gccggccaga ttagaattgc cccagtgtcg ctgggaggta
     3901 gttgcacctt cggcagcata tgttacaaat gcaacaatcg tttgagtgcc ctaaggttca
     3961 ggccgtgtcc acgcccttct cgcgcaccat tgtctttacc aacgcagtcg agggtgccga
     4021 gcgtccggca agcatgcccc cgcgttccac cttgacgggc tgcccgtggc gcgatgtgaa
     4081 atccatgctc cgcgacgtgg gcctgcggcc aacccgccag cggatggcgc tcggctggat
     4141 cctgttcggc aagggcgatc gccacgtcac cgccgagatg ctttacgagg aggcggtcaa
     4201 ggccaaggtt ccggtgtccc tggccactgt ttataacacg ctgcatcagt tcactgacgt
     4261 ggggctgctg cgccaagttg ccgtcgacgg ctcaaagacc tatttcgata ccaacgtttc
     4321 ccagcaccac cacttcttca ttgagggcga gaacgatctg ctcgacatcc ccgacaccga
     4381 cgtggtcgtc ggcaggacgc ccattccgcc cgagggctac gagattgcgc gtgtcgacgt
     4441 ggtagttcgg ttgcgacgca aggcgcgctg agcggttctt ctgtctgttt atgtggccgg
     4501 gcccgttttc ccggtctttt cttttttcgg cttactccac attctcgttg ggatagacgc
     4561 cccagagccg ctcctgcagg gtccagccgt cgaagcccgg tccgacgatg cggcaccagc
     4621 tgccgctgca gcgtttgatt gccgccagca cccccgcctg caatctggcg attacggggg
     4681 agctgctgtc acccttctcg taaagcggca cgagctcttt cttgtccttg ggcgtgacca
     4741 ccgccgtgcg ccgtcccgac agcagcgaat gatagaccca gccttcggac ccttcccaat
     4801 cacggatgcg ccgccaattg tccgattcgg cggtaatttc caccggcaag ccggcccggg
     4861 tatagacgaa catcacctcg tggtcgcgcg tgggaccgcc acgcacattg acgcgatcgg
     4921 gcttgagact cacgaagcgt ggcattggca agccgctctt gaggcccatc aattcccctg
     4981 catgcgacgc gatgcacggg gcagtgagca gcgcgagagc cgctgcacat gcataccgga
     5041 cgatctgcga attgcgcgtc gaattcatgg ctctaacggc gtcggaaaca tcgatgcggg
     5101 cgatcggctc gcgcgagctg ctatcgcaac gggcctttgt ctccacaact tgcatctgtt
     5161 acagagagag acctcacccg cgttgaaagc gatgtcagtg tcgaggacgg cggttaagga
     5221 gacctgaacg aaggcggggc ttgctcattc gcggggcagc gaaatggcga aggtcgaaaa
     5281 accatggcgc accgcaaaag accgctggtc gtcgtcaccc gcaagcttcc ggacagcatc
     5341 gagacgcgca tgcgcgagct gttcgacacc cagctcaacc tcgatgacaa gcccatgacc
     5401 ccggcagagc tcgccgacat ggtaaagaac gccgatgtgc tggtgcccac ggtgaccgac
     5461 cgcatcgatg cgtccgtact gagcaaggcc ggagataaac tcaagctgat cgccaactac
     5521 ggaaacggcg tcgatcatat cgatgtggcg accgcactca gccgcggcat cactgtgacc
     5581 aacacgccgg gggtcctcac cgaggacact gccgacatga cgatggcgct catcctcgcg
     5641 gtgccacgcc gacttgccga aggggccgcc atgctaagcg aagacaaacc gtggccgggc
     5701 tggtcgccca cctggatgct cggccaccgc atctggggca agcggctcgg catcatcggc
     5761 atggggcgga tcggccaggc ggtggcacgc cgcgcccgcg cctttgggct gcagatccac
     5821 taccacaacc gccgccgcgt tccggccagg atcgaggagg agctgaccgc gacgtattgg
     5881 gagagtctcg atcagatgct cgcccgcatg gacatcatct cgatcaattg tccgcacacg
     5941 ccagcgactt ttcatttgct gtccgcgcgg cggctcaaga tcatccggcc gcaagcctat
     6001 atcgtcaaca ccgcgcgcgg agaggtcatc gacgagaacg cgttggtgcg cttgatcgcc
     6061 tcaggcgacg tcgcaggcgc cggactcgat gttttcgagc acgagccggc ggtcaatccg
     6121 aagttggtca agctcgcgcg cataggcaag gtcgtgctgt tgccgcatat gggctcggcc
     6181 acgctcgaag gccgcatcga catgggggaa aaggtgatcg tcaacatcaa gacttttctg
     6241 gatgggcatc gccctcccga ccgcgtgctg ccgtcgatgt tgtgagtttg caggtttttc
     6301 ccgctggtcc ctgctgtggg acgccttgat ttgcgctacc gtgacgcaaa acataattag
     6361 ggagagcgct cgatgcgtgc ttcgctcgcc gccgtcgtgg ccatcctcgc cacagccacg
     6421 cccgttgttg ccgcaacgct gacgccgaac gaaatccaag cgaccttctt caccggtcaa
     6481 ccgttcacgg cgtccgcgac caacgtcaaa tacaagatgg tattcagcgc cgacggcaag
     6541 atgactcgcg agccggccgg taccgcgggc tcaaagagcg aaggcacctg gaagctaagc
     6601 aaggacggtt tctgcaccac ctggaaaggc tccaaatcca attgctatcg cctactcacc
     6661 gccggcgaca acaagtggtc ggtgatgcaa ggagctaccg cggtcgcgac ctggacgaag
     6721 tgagcccgcg cttagaaaag gagctgtggg cgcggtcgcg gacgtctgcg gggctccggc
     6781 aacaggtcaa gcgtgaagcg agaggtcctt gatcgtggga tgctcgcccg agagcggatt
     6841 ggaggggtcc catccataac gaagcgtttc gaagcgcatg gcacgggcgt cgaacatgag
     6901 aagccggcca atcagccctt cgccgaaccc gacgatctcg cggatcactt cgagcgccat
     6961 gagtgagccg agcactccag tgagcgcgcc gagaatgccg gcttccgcgc aagcgggaac
     7021 gctgcccggc ggcggcggtt cggggaacag gcagcgatag gtcgggttgg gcgttccgtc
     7081 cgcgttacgc tcgtgggcgc gaatggtggt gagcgtgccg tcgaacacgc caacggcggc
     7141 ggtgacgagc ggcttcttag caaagaaaca cgcatccgac accagatagc gggtggcaaa
     7201 attatccgag c
//
LOCUS       DATCWM010000554         2579 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_473587, whole genome shotgun sequence.
ACCESSION   DATCWM010000554 DATCWM010000000
VERSION     DATCWM010000554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2579
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_473587"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1403
                     /locus_tag="VIQ50_10895"
     CDS             <1..1403
                     /locus_tag="VIQ50_10895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012318604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HEY9360931.1"
                     /translation="ELDTAVHVEGYEPPADPRLNVIKVTPDPGVIEINVHPAVTWREA
                     VEITQTLYEEARLCRLGSEKFMIDGRHVGTGGGNHVVLGGQTAAESPFLRRPDLLKSL
                     ILYWQRHPSLSYLFSGLFIGPTSQAPRLDEARDDQLYELEIALAMVPAPGEGEPPRPW
                     LVDRLFRNLLVDVTGNTHRAEICIDKLFSPDGPTGRLGLVEFRSFEMPPHPRMSLAQQ
                     LLVRALVALFWRAPQRGSPVRWGTALHDRFMLGHFVWQDFLGVLEDLRAAGYDFDPQW
                     FHAQREFRFPFYGAVTHGGVTLELRGALEPWHVLGEDPTAGATTRFVDSSVERLQVRV
                     EGLNPARHAVACNRRLVPLSPTGRSGEYVAGVRFKAWKLSTALHPTIDVHVPLTFDIF
                     DRWSERSLGGCVYHVVHPGGRNYETLPINSYEAEARRLARFQDLGHTPGSFDLPQEER
                     AFEYPVTLDLRRPPHA"
     gene            1554..2429
                     /locus_tag="VIQ50_10900"
     CDS             1554..2429
                     /locus_tag="VIQ50_10900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018458262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360932.1"
                     /translation="MADKQYDRSSQDLGNIVNLGHVNVCINDQHLATHYYISGLGLTR
                     DPFLNTGAGNMWVNVGISQFHLPTGQPDVLRGVTGLVVPDRATLLERLTQLREPLQGT
                     KFDFRESNDCVETTCPWGNRINVHAPDESRFGRIVLGMPYIEFDVRPGTAERIARFYR
                     EVMGALATVAATADVRKACVQVGEKQYWYFRETDAPERPYDRHHAQVYIANFSGPYRR
                     LKELGLLTVEVNDHEYRFKDVVDLDTREVLFTVEHEVRSQTHPLYGRPLVNRNPAQSN
                     RNYRPGHDSISWAMA"
BASE COUNT          441 a          866 c          799 g          473 t
ORIGIN      
        1 tcgagctcga cacggcggtc catgtggagg gctacgagcc gcctgccgat ccgcgcttga
       61 acgtcatcaa ggtcacgcct gatcccggcg tcatcgagat caacgtccat cccgccgtaa
      121 cttggcgcga ggcagttgaa atcacccaga cgctctacga ggaggcgcgt ctctgccggc
      181 tgggcagcga aaaattcatg atcgatggcc gccacgtcgg caccggcggc ggcaatcacg
      241 tcgtgctggg aggccagacc gcggccgaga gtccgttcct gcgccggcct gacctgctca
      301 aaagcctgat cctctattgg cagcggcatc cgtcgctgtc ctacctgttc tccggcctct
      361 tcatcggccc gaccagccag gccccgcgcc tcgatgaggc gcgcgatgac cagctctacg
      421 agctcgagat cgcgctcgcc atggtgccgg cgcccgggga gggcgagccg ccgcgcccgt
      481 ggctagtcga tcggctattt cgcaatctcc tcgtcgacgt caccggcaac acccatcgtg
      541 ccgagatttg catcgacaag ctgttctcgc ccgacggtcc gaccgggcgg ctgggtctgg
      601 tcgagttccg ctcattcgaa atgccgccgc acccgcgcat gagcctggcg caacagttgc
      661 tcgtgcgcgc gctggtcgcc ttgttctggc gcgcgccgca gcgcggctcg ccggtgcgtt
      721 ggggcactgc cttgcacgac cgatttatgc tcgggcactt cgtctggcag gactttctcg
      781 gcgtgttgga agacctgcgc gccgccggat atgatttcga tccgcagtgg tttcatgctc
      841 agcgcgaatt tcgctttccg ttctatggcg ccgttaccca tggcggcgtc acgctcgagc
      901 tgcgaggcgc gctcgagcca tggcacgtgc tgggcgaaga ccccaccgcc ggcgccacaa
      961 cgcgcttcgt cgattcctcg gtggaacggc tgcaggtgcg ggtcgaaggc ctaaatcccg
     1021 cccgtcacgc cgtcgcctgc aaccggcggc ttgttccatt gagcccgacc gggcgctccg
     1081 gcgaatacgt cgccggcgtg cgtttcaagg cgtggaaatt atcgacggca ctgcatccga
     1141 cgatcgacgt ccacgtcccg ctcaccttcg acattttcga tcgttggagc gagcgctcgc
     1201 tcggcggctg cgtctatcac gtggttcatc cgggtggacg caactatgag actttgccga
     1261 tcaactccta cgaagcggag gcgcggcgct tggcgcgatt ccaggatctc gggcatacgc
     1321 cgggatcttt cgatttgccg caagaggaac gcgcgttcga atatccggtg actctcgacc
     1381 tgcgccgtcc gccgcacgcc tgataagccc gtggccggcg cctcgagggt tggcctgagc
     1441 gtgacgcccg tcgcggagta gggtgtgcat tcaccgctac cgagccgccg tcgcatgcgt
     1501 tgtgagccgg aaccggatga gcttaatatc ccgcggttgg gaaggaatgc gccatggcag
     1561 acaagcaata cgaccgctcg agtcaggatc tcggcaacat cgtcaatctc gggcatgtca
     1621 acgtttgcat caacgaccaa cacctagcga cgcattacta catcagcggc ctcggcctca
     1681 cgcgcgatcc ctttctcaat accggcgccg gcaacatgtg ggtcaatgtc gggatcagcc
     1741 aattccatct cccgaccggc caaccggacg tgctgcgcgg cgtcaccgga ctggtcgtgc
     1801 cggaccgcgc cacgttgctc gagcgcctga cacagctgcg cgagccgctg caaggaacga
     1861 agttcgactt ccgcgaaagc aacgattgcg tcgagaccac ctgcccgtgg ggcaaccgca
     1921 tcaacgttca tgcgccggac gagagccgct tcggccgcat cgtgctgggc atgccctata
     1981 tcgagttcga cgtccgtccc ggcacggcgg agcgcatcgc ccgtttctat cgcgaggtga
     2041 tgggcgcgct cgcgaccgtg gcggcaactg cggacgtccg taaggcctgc gtgcaagtgg
     2101 gcgagaaaca atattggtac ttccgcgaga ccgacgcgcc ggagaggccg tacgaccgcc
     2161 atcacgcaca ggtctacatc gccaatttct caggccccta tcggcgactg aaagagctcg
     2221 gtcttctcac cgtggaggtc aacgaccacg aatatcgctt caaggatgtc gtcgatctcg
     2281 atacgcgcga agtgctgttc accgtggagc acgaggtgcg cagccagacc catccgctct
     2341 atggcaggcc gctcgtcaac cgcaacccgg cgcagagcaa tcgcaactac aggccggggc
     2401 acgacagcat ttcctgggcc atggcatgac cccggtagcg cgatcccagt gatggccgcg
     2461 cgacgcgccc tggtcatcgg cggttcgctc ggcgggctgt tcgccgcact tctcctgcgc
     2521 agcgccggtt ggaacgccgt cgtcttcgag cgcaatcccg aggatcttac gggccgcgg
//
LOCUS       DATCWM010000555         2358 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_279614, whole genome shotgun sequence.
ACCESSION   DATCWM010000555 DATCWM010000000
VERSION     DATCWM010000555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2358
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_279614"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..414
                     /locus_tag="VIQ50_10905"
     CDS             <1..414
                     /locus_tag="VIQ50_10905"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RibD family protein"
                     /protein_id="HEY9360933.1"
                     /translation="LPLASKLVSTARQVPLWVLASEAAEPMREQALAAQGADVARVAT
                     TDGRLELADVLKLLARRGITRVMVEGGPILAAAFLRADLVDEAALFRSPNVIGPEGID
                     ALDGLPLSALTRSPRLKALGSEAIGPDTVETFERA"
     gene            416..1021
                     /locus_tag="VIQ50_10910"
     CDS             416..1021
                     /locus_tag="VIQ50_10910"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018456855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HEY9360934.1"
                     /translation="MFTGIITDIGEVIAVEPRAQGLARLTIACGYDPDSIGVGASIAC
                     SGVCLTVVARGKEGNRGWFAVEAAAETLRLTTVGNWRRGTRINLERALKIGDELGGHM
                     VAGHADGLAGVVTREDFTDMARFTLRAPQALTRFIAAKGSVALDGVSLTVNEVADHTF
                     SVLIIPHTLKVTTLGSLAAGDAVNLEVDLMARYVARLMEQP"
     gene            1094..1600
                     /gene="ribH"
                     /locus_tag="VIQ50_10915"
     CDS             1094..1600
                     /gene="ribH"
                     /locus_tag="VIQ50_10915"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HEY9360935.1"
                     /translation="MAERRRSVGNDASDGDSGDLNGARILIVEARFYEDIADALLAGA
                     TRALQKAGAVFDRVSVPGSLEVAPAIAIAADAAERSGRPYDGAVALGCVIRGETLHFE
                     IVSQESARALLELSVARRLPIGNGILTVDTNAQAWTRARPEEADKGGDAVRAALSLVR
                     LKRRLAMG"
     gene            1604..2101
                     /gene="nusB"
                     /locus_tag="VIQ50_10920"
     CDS             1604..2101
                     /gene="nusB"
                     /locus_tag="VIQ50_10920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEY9360936.1"
                     /translation="MARSGAWKDERKANRRGAARLAAVQALYQMDIAGTGLNEILAEF
                     ESHWIGREVEGAQYLPAEAAFFRDVVSGVVREQRSLDPLVDKVLSQGWPLKRIEAILR
                     AVLRAGAYELGHRSDVPARVVVSEYVDVANAFVDKDETGMVNAVLDQIARQFRAGEFA
                     PPPTG"
     gene            complement(2114..>2358)
                     /locus_tag="VIQ50_10925"
     CDS             complement(2114..>2358)
                     /locus_tag="VIQ50_10925"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEY9360937.1"
                     /translation="DWRKFPNPDVYDVDRRPQGHLGFGSGKHFCLGSQMARLVTAVAM
                     RRFVERVPDYHLTVDEIAWNSSSNFRSPAALPFAIG"
BASE COUNT          374 a          747 c          828 g          409 t
ORIGIN      
        1 ctgccgctgg cgagtaagct ggtgtcgacc gcgcggcagg tgccgctgtg ggtcctcgcc
       61 agcgaggcgg cagagccgat gcgcgagcag gcgctcgcgg cccagggtgc cgatgttgcg
      121 cgcgtggcga cgacggatgg caggctcgag cttgccgatg tgctgaagct tttggcccga
      181 cgcggcatca cgcgggtgat ggtcgagggc gggcccattc tcgccgccgc atttctgcgc
      241 gccgatctgg tcgatgaggc cgcgctattt cgctccccga acgtcatcgg gccggaaggg
      301 atcgatgccc tcgacggcct gccgctttcc gcattaactc ggtcgccgcg gctcaaggcg
      361 ctcggcagcg aagccattgg gccggacacg gtcgagacat tcgagcgggc gtgacatgtt
      421 caccggcatc atcaccgata tcggggaggt gattgcagtc gaaccgcgcg cgcagggact
      481 ggcccgcctc acgatcgcct gcggctatga tccggacagc atcggcgtcg gtgcttcaat
      541 tgcctgcagc ggcgtatgct tgaccgtggt cgcgcgcggc aaggaaggca accgcggctg
      601 gtttgccgtc gaagccgcgg ccgagacatt gcgcctgacg acggttggca actggcgccg
      661 gggcacgcgc atcaatctgg agcgcgcgct caagatcggc gacgaactcg gcggacacat
      721 ggttgccggt catgcggatg gcctcgccgg cgtggtcacg cgcgaggact tcaccgacat
      781 ggcgcgtttc accttgcgcg cgccgcaggc gcttacccgg tttatcgctg cgaagggctc
      841 cgtggcgctc gatggggtgt cgctcaccgt caacgaggtc gcggatcata cgttctcggt
      901 gctgatcatt ccgcacacgc tcaaggtcac gacgctcgga tcacttgctg ccggcgacgc
      961 ggtcaatctc gaggtcgacc tcatggcgcg ctatgtggcg cggctaatgg agcagccgtg
     1021 aggcggcaag agctgcgctc acttgttccg acgcgctctg cttgctacga ccgctcgaca
     1081 ctggagactg gtcatggccg agcgccgccg ctccgtcggc aacgatgcgt ccgacggcga
     1141 ttccggcgac ctcaacggcg cgcgtatcct catcgtggag gcgcgcttct acgaggacat
     1201 cgccgacgct ttgctcgcgg gcgccacgcg tgcgctgcaa aaggcgggtg cggtctttga
     1261 ccgcgtcagc gtgccaggct cgctcgaagt ggcaccggcc atcgcgatcg cggccgatgc
     1321 cgccgagcgt tcaggccgac cctacgacgg cgcggttgcg ctcggttgcg tcattcgcgg
     1381 cgagacgctg catttcgaga tcgtatcgca ggaatcggcg cgtgcgctgc tcgagctgtc
     1441 ggtcgcgcgg cgactgccga tcggcaatgg tattctcacc gtcgacacca acgcgcaggc
     1501 ctggacgcgg gcgcgtccgg aggaggccga caagggcggc gatgcggtgc gggcggcgct
     1561 ttcgctcgtg cggctcaagc gccgtctcgc gatggggtga cgcatggccc gcagcggcgc
     1621 ttggaaggac gaacgcaagg ccaaccgccg cggcgctgcg cgcctcgccg cggtgcaggc
     1681 gctttatcag atggacatcg ccggcacggg actgaacgag atcctcgccg agttcgagag
     1741 ccattggatc ggccgcgagg tggagggagc gcaatatctg ccggcggagg cggccttctt
     1801 tcgcgacgtg gtttcgggcg tggtgcggga gcaacgcagc ctcgacccgc tggtcgacaa
     1861 ggtgctatcg cagggctggc cgctcaagcg catcgaagcg atcttgcgcg ccgtgctccg
     1921 ggccggagcc tatgagctcg ggcatcgcag cgatgtgccg gcccgtgtgg ttgtgtccga
     1981 gtatgtcgac gtcgccaatg cgttcgtgga caaggatgag accggcatgg tcaatgccgt
     2041 gctcgatcaa atcgcgcgac agtttcgtgc cggcgagttt gcgccgccgc ccacgggctg
     2101 acatgcctct cgttcagcca atcgcgaacg gcaaggcggc agggctgcga aaattcgatg
     2161 acgagttcca ggcgatctcg tccaccgtga gatggtaatc cggcacccgt tcgacgaaac
     2221 gccgcatcgc gaccgcggtg accagtcgtg ccatctgact gcccaggcag aagtgtttgc
     2281 cggagccaaa gccgagatga ccttgcggcc ggcgatcgac gtcatagaca tccggattgg
     2341 gaaatttccg ccagtcgc
//
LOCUS       DATCWM010000556         5980 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_85190, whole genome shotgun sequence.
ACCESSION   DATCWM010000556 DATCWM010000000
VERSION     DATCWM010000556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5980)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5980)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5980
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85190"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..351)
                     /locus_tag="VIQ50_10930"
     CDS             complement(<1..351)
                     /locus_tag="VIQ50_10930"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY9360938.1"
                     /translation="MAPSEPRLTVKQSLTASEMDDVGALVREARWNQLAADWRVFLEF
                     GRLYVAETDEGHIVATTATLPYGGRFAWISMVLVTGDYRRRGLATKLMQWAMRDLAAG
                     DLVPVLDATPDGRAV"
     gene            complement(338..1378)
                     /locus_tag="VIQ50_10935"
     CDS             complement(338..1378)
                     /locus_tag="VIQ50_10935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007591746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9360939.1"
                     /translation="MTQSPEALPDRLRDVEHLEEVMTTPSAAVIAALQQLPGDIIVLG
                     VGGKIGPTLARLAKRAAPAKRVVGVARFSEKGVREKLTQCGIECVAADLLARKEIEAL
                     PKLANVVFMAGRKFGSAGDEEQTWAMNALVPALVADAFAGSRIVAYSTGCVYPYVNVD
                     HGGATEATPATPPPGAYANSCVAREAMFRYFSRARGTPGRIIRLNYAIDMRYGVLHDV
                     ASRVLTGTPINLSTGHVNVIWQGDANAMVLRAFGHCTVPASPLNVSGPETVRIRWLAE
                     SFGQRLGKPPVFTGMEAPEAWLVNTAQATRLFGYPSVPLGKLVDWTADWVARGMPSLG
                     KDTHYDVRDGAF"
     gene            1522..2709
                     /locus_tag="VIQ50_10940"
     CDS             1522..2709
                     /locus_tag="VIQ50_10940"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEY9360940.1"
                     /translation="MKVFMFHLMPYADLDMSFSDKYRSAWVVLPNTYFDPQKGHELYN
                     RYLDELELAAELGFDGVSVNEHHQNAYGLMPSPVVMAGALARRTKTAKIAILGNAFCL
                     REHPLTLAEEHAMLDCITGGRLITGMVRGIGAEYYSIGSNPAFSHARFQEAHDLVVQS
                     WTRPGPFAFEGKFYHFEYVNVWPRPYQQPHPPIWTPSTGSSETIEWSAHPSRKYVYLQ
                     TYSPIASVARFLNGYRQAAQRLYGYTASSEQIGWCAPVYVSDTDAKARAQAAPHIEAL
                     FNKLLRQPFQMIFPPGYLSSKSLKNMLSHKRSVTGQEHTIDTLIEQGIMLCGSPDTVR
                     KQLVDAHRMLGFQNFLALLQFASLPGDLTEKNIRLFAREVLPALQCLSDKEYAGLQTE
                     AAE"
     gene            2718..3728
                     /locus_tag="VIQ50_10945"
     CDS             2718..3728
                     /locus_tag="VIQ50_10945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007759303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9360941.1"
                     /translation="MRHIDAFCHFFPPRLFERMSRTAGGTRDIGKRMQGVRTIYDLDA
                     RLKMMDEFDDYAEVLSLGWPPLDALAPPDAAAEFARIANDGLAELCTKYPDRFAGYVG
                     ALPMNAPEAAAKEAERILVHGSASGLQLHTNVDGACLDEPRFFPIFEVAARSGKPVLL
                     HPARTADVPDFPAEDKSKYEIWAILGWPYETSCTMARLIFSGVTTRLPDLKILVHHLG
                     AMIPFFDARLETGWATLGSRTSDEDYGGVLKMLGKPMMHCFKDFYADTALCGGRIGTV
                     CGLQFFGADHVLFASDAPFGPEGGASYIRETMKVIAALDIAESDKEKICHRNAQALFK
                     LP"
     gene            3827..4660
                     /locus_tag="VIQ50_10950"
     CDS             3827..4660
                     /locus_tag="VIQ50_10950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012706250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY9360942.1"
                     /translation="MTVLAKPAEAAAANMISIAGIELEMLERGGGAPILYLHGGAGIT
                     PDLAFIDLLAPRRRVIAPSHPGFGRSSLPDWLDGVDDIAHVYLELLDRLALTRTDVIG
                     LSLGGWIAAELATKVPERIDHLVLIAPVGVKTGGPDQLDIPDIFAMSRDKLDRYLFHD
                     PARNAPDLAAMPDEKLYIFARNRETLALLTWEPYMHNPKLKHRLHRVSVPTLFLRGAS
                     DGIVSAEYLERYAALIPKAQTDTIGEAGHLPQVEQPETTAAKVLHFLEGDTAAEASGA
                     R"
     gene            4660..5862
                     /locus_tag="VIQ50_10955"
     CDS             4660..5862
                     /locus_tag="VIQ50_10955"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014332839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEY9360943.1"
                     /translation="MKAWHFSENAYPYLPPADEYESIRVSLPNRFYDPKKGATLYDRY
                     IDEWLVAEDEGVEIMLNEHHQTATCVDPAAPLVLAALARLTKRARLLILGNPVANRRQ
                     PVRVAEEMAMVDVLSKGRLECGFVRGVPYEVLPANSNPVRMNERQWEAIDLIVKAWTS
                     HDGPVSHEGRFFHHRNINIWPRPYQQPHPPIWVSTTTPGGAARVGACGYVQATFLTGY
                     RGTPAIYASYRKGWRGAGRSHEVPVNRLAYAALLYAAESEAEARAGAEKLLWYVRANK
                     VPLHFCYPPGYVPTAVHAQILRGAAIDQHAANRANATVENAIEAGIMFAGTPDQVFRQ
                     IEKMYNHVGGFGHLLIMGQAGFLEHEETVRGIKTFAREVYPQLKQAFPDTAISGRHEE
                     APSAGVMA"
BASE COUNT         1078 a         1980 c         1918 g         1004 t
ORIGIN      
        1 gacggcgcgg ccgtcgggcg tggcgtcgag caccggcacg agatcgccag ccgcgaggtc
       61 gcgcatcgcc cattgcatca acttcgtcgc cagtccccgg cggcgatagt cgccggtcac
      121 cagcaccatg ctgatccagg cgaagcggcc gccatagggc agcgtcgcgg tagtagcgac
      181 gatgtggcct tcgtccgtct cggcaacata gagccggccg aactcgagaa agacgcgcca
      241 atcggcggcc agctgattcc accgcgcttc gcgcacgagc gcgccgacgt cgtccatttc
      301 cgacgccgtc agggattgct tgaccgtgag ccgcggctca gaaggcgcca tcgcggacat
      361 cgtaatgcgt gtccttgccg aggctcggca tgccgcgcgc gacccagtcc gcggtccaat
      421 cgacgagctt gccgagcgga acgctgggat agccgaagag ccgcgtcgcc tgcgcagtgt
      481 tgacgagcca agcctcggga gcttccatgc cggtgaagac cggtggcttg cccagccgct
      541 gcccgaagga ttccgcgagc caacggatgc gcaccgtttc cggcccgctc acattgagcg
      601 ggctcgcggg caccgtgcaa tggccgaagg cgcgcagcac catggcattg gcgtcgcctt
      661 gccagatcac gttgacgtgg ccggtcgaaa gattgatcgg ggtgccggtg agtacgcgcg
      721 aagcgacgtc gtgcagcacg ccgtagcgca tgtcgatcgc gtagttgagg cggatgatgc
      781 ggcccggcgt tccgcgcgcg cgggaaaagt atcggaacat cgcctcgcgg gcgacgcagg
      841 agttggcgta ggcgcccggc ggcggcgtgg ctggggtcgc ttccgtcgct ccgccatgat
      901 ccacgttgac gtaaggatat acgcagccag tcgagtaggc gacgatgcgc gagccggcga
      961 aagcgtcggc gaccagcgcc ggtacgagcg cgttcatcgc ccaggtctgc tcttcgtctc
     1021 cggcggagcc gaacttgcgg ccggccatga acaccacgtt ggcaagtttc ggcagcgcct
     1081 cgatctcctt gcgcgcgagc agatcggccg cgacgcattc gatcccgcac tgcgtgagct
     1141 tctcgcgcac gcccttctcg ctgaagcggg caaccccaac cacgcgcttt gccggcgccg
     1201 cgcgcttggc gaggcgggcg agcgtcggcc cgatctttcc gccgacgccg agcacgatga
     1261 tgtcgccggg aagctgttgc aacgccgcga tcacggcagc cgacggcgtg gtcatcacct
     1321 cctcgaggtg ctccacgtcg cgcaggcgat ccggcagcgc ttcgggggac tgggtcactc
     1381 gatatccttg aacgtcaacg aggctggcac gcggcgatgc taacgggtca gcgcttgcgc
     1441 cagcaaggcg tgcgccgctg gtaaagcagg cccgacaacg tacaatcagg ccacagcgag
     1501 gaaatcctgc cggaggcggc gatgaaagtc ttcatgtttc acctcatgcc ctatgccgat
     1561 ctggacatga gtttcagcga caaatatcgc tccgcctggg tggtgctccc gaacacctat
     1621 ttcgatccgc agaaagggca cgagctctac aaccgttatc tcgacgaact cgagctcgcc
     1681 gccgagctcg gcttcgacgg cgtgtcggtc aacgagcatc accagaacgc ctatgggttg
     1741 atgccatcgc ctgtggtcat ggcgggcgcg ctcgcgcgcc ggaccaagac cgccaagatc
     1801 gcgatcctcg gcaacgcctt ctgtctgcgc gagcatccgc ttacgctcgc cgaggagcac
     1861 gcaatgctcg actgcatcac cggcgggcgg ctgatcaccg gcatggtgcg cggcatcggc
     1921 gccgagtact attccatcgg ctccaatccg gcgttttcgc atgcgcgctt tcaggaggcg
     1981 cacgacctcg tggtgcagag ctggacgcgg ccggggccgt tcgcgttcga aggcaagttc
     2041 tatcatttcg aatacgtgaa cgtgtggccg cgaccctatc agcagccgca cccgccgatc
     2101 tggacaccct cgaccggctc gagcgaaacc atcgaatggt cggcgcaccc gtcgcgcaaa
     2161 tacgtctatc tgcagaccta cagcccgatc gcgtcggtgg cacgctttct caatggctac
     2221 cgccaggcgg cgcagcgact ctacggctac acggcgagct ccgagcagat cggctggtgc
     2281 gcgccggtct acgtgtccga caccgacgcc aaggcgcgcg cgcaagccgc tccgcacatc
     2341 gaagccttgt tcaacaagct cctgcgccag ccgttccaga tgatatttcc gcccggctat
     2401 ctcagctcca agtcgttgaa gaacatgcta agccacaagc gatcggtcac ggggcaggaa
     2461 cacaccatcg acacgctgat cgagcagggg atcatgcttt gcggcagccc cgataccgtg
     2521 cgcaagcaac tggtcgatgc gcatcggatg ctcggttttc agaattttct cgcgctgctg
     2581 caattcgcct ccctgccggg cgacctcacc gagaagaaca tcaggctgtt cgcccgcgag
     2641 gtgctcccgg cgctgcaatg cttgagcgac aaggaatacg ccggattgca gacggaggcc
     2701 gcggagtagc gcgacccatg cgccacatcg acgcgttctg ccatttcttt ccgccgcgcc
     2761 tgttcgagag aatgtcgcgc accgcgggcg gcacgcggga tatcggtaaa cgcatgcagg
     2821 gcgtgcgcac catctacgat ctcgatgccc gccttaagat gatggacgag tttgacgact
     2881 acgctgaggt tctctcactc ggctggccgc cgctcgatgc gctggcgccg cccgatgcgg
     2941 cggcggaatt cgcccgcatc gccaatgacg gcctcgcaga gctctgcacg aaatatcccg
     3001 atcgcttcgc gggctacgtc ggtgcgctgc cgatgaacgc gcccgaggcg gccgccaagg
     3061 aggccgagcg cattctcgtc catggcagcg ccagcgggct ccagctccac accaacgtcg
     3121 acggcgcctg cctcgacgag ccgcggttct ttccgatctt cgaagtcgcg gcgaggtccg
     3181 gcaaaccggt gctgctgcac ccggcgcgca ccgccgacgt cccagatttt ccggccgagg
     3241 acaaatcgaa atacgagatt tgggcgatcc tgggctggcc ctatgagacc agctgcacga
     3301 tggcgcggct gatcttctcc ggcgtgacga cgcggctgcc ggatctcaag atcctcgtcc
     3361 atcacctcgg cgcgatgatc cccttcttcg acgcgcggct cgagaccgga tgggcgacgc
     3421 tcggcagccg cacctcggat gaggactatg gcggcgtgct caagatgctc ggcaagccga
     3481 tgatgcattg cttcaaggac ttctatgccg acacggcgct ctgcggcggt cgcatcggaa
     3541 ccgtctgcgg gctccaattt ttcggcgccg atcacgtgct cttcgcctcg gacgcgccgt
     3601 tcggcccgga gggcggcgca agttacatcc gcgagaccat gaaggtgatc gccgcgctcg
     3661 acatcgccga atccgacaag gagaagattt gccatcgcaa cgcgcaggcg ctgttcaagc
     3721 tgccatgacg gcgcggcggc tttaccggtc tttgcgacat cagttaaggt tgcatcctca
     3781 atgagacgcc gagcgccgcg ctcggcctat accagcggaa gctgcggtga cggtcctcgc
     3841 caagcctgcc gaagcggcag ccgcgaatat gatctcgatt gccgggatcg agctcgagat
     3901 gctcgagcgc ggaggcggcg cgccgatcct ctatctgcac ggcggcgcgg gcatcacacc
     3961 cgaccttgct ttcatcgacc tgctcgcgcc gcggcggcgc gtcatcgcgc cgtcgcatcc
     4021 cggatttggc agatcgtcgc tgccggactg gctcgacggc gtcgatgaca tcgcccatgt
     4081 ctatcttgaa ttgctggatc gcctggcgtt gacgcgaacc gacgtcatcg gactgtcgct
     4141 cggcggatgg atcgccgccg agctcgccac caaggtgccg gaacggatcg atcaccttgt
     4201 gctgatcgcg ccggtgggcg tgaagaccgg cggcccggac cagctcgaca ttcccgacat
     4261 cttcgcgatg tcgcgcgata agctcgaccg gtacctcttc cacgatcccg cgcgcaacgc
     4321 gcccgacctg gcggcgatgc cggacgagaa gctttacatc ttcgcgcgca accgcgagac
     4381 gctggcgctg ctgacctggg agccgtacat gcacaatccc aagctcaagc atcgcctgca
     4441 ccgggtcagc gttcccacgc tgtttctgcg cggcgcaagc gacggcatcg tctctgccga
     4501 atacctcgag cgctacgcgg cgctcattcc caaggcgcag actgacacca tcggcgaggc
     4561 gggacacctg ccgcaggtcg agcagcccga aaccacggcg gcgaaggtgc tgcatttcct
     4621 ggagggggac acagcggccg aggcctcggg agcacggtga tgaaagcgtg gcactttagc
     4681 gagaacgcct atccctatct gccgcccgcc gacgaatacg agtcgatccg cgtctcgctg
     4741 cccaatcgtt tttatgatcc gaagaagggg gcaacgctct acgaccgtta catcgacgaa
     4801 tggttggtgg ccgaggatga aggcgtggag atcatgctca acgagcatca ccagaccgcg
     4861 acctgcgtcg atccggccgc gccattggtg cttgcggcgc tggcgcggct gaccaagcgc
     4921 gcacggctgc tgatcctggg aaatcctgtc gccaaccgcc gccagcccgt gcgcgtcgcc
     4981 gaagagatgg ccatggtgga cgtgctgtcg aaagggcgtc tcgaatgcgg tttcgtgcgc
     5041 ggggtgccct atgaggtgct gccggcgaac agcaatcccg tgcgcatgaa cgagcggcaa
     5101 tgggaggcca tagacctcat cgtcaaggcc tggaccagcc acgatggccc ggtcagccat
     5161 gaagggcggt tctttcacca ccgcaacatc aacatttggc cgcgcccgta ccagcaaccg
     5221 catccgccca tctgggtatc gacgaccacg ccgggcggcg ccgcgcgcgt cggcgcgtgc
     5281 ggctatgtgc aagcgacgtt cctcaccgga tatcgcggca cgccggcgat ctacgcctcc
     5341 taccgcaagg gctggcgcgg cgccggccgc agccacgagg tgccggtcaa ccggctcgcc
     5401 tacgcggcgc tgctctatgc cgccgagagt gaggccgagg cgcgcgcggg cgccgagaag
     5461 ctcctctggt acgtgagggc gaacaaggtg ccgctgcatt tttgctatcc gccaggttac
     5521 gtgccgacgg cggtgcatgc gcagatccta cgcggcgcgg cgatcgacca gcatgcagcg
     5581 aacagagcca acgcaaccgt ggagaacgcg atcgaggccg gcatcatgtt cgccgggacg
     5641 ccggatcagg tcttccgcca gatcgagaag atgtacaacc acgtcggcgg cttcgggcat
     5701 ctgttgatca tgggacaggc cgggtttctc gagcacgagg agaccgtgcg cggaatcaag
     5761 accttcgcgc gcgaagtcta tccccagctc aagcaggcgt ttcccgatac ggcgatttct
     5821 ggccgacacg aagaagcgcc gagcgcgggg gtgatggcgt aggtgcgcga ccatccacgg
     5881 gtctcgaacc agccatgggt gaatggtgag ccggagcaag ccggccgatc gccgggatag
     5941 cttacacaca ccttacggat gcatcggcgg gcttgcgaat
//
LOCUS       DATCWM010000557         5057 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_47208, whole genome shotgun sequence.
ACCESSION   DATCWM010000557 DATCWM010000000
VERSION     DATCWM010000557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5057
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47208"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            261..1496
                     /locus_tag="VIQ50_10960"
     CDS             261..1496
                     /locus_tag="VIQ50_10960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012386274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEY9360944.1"
                     /translation="MAWRSSIAPIDPPASTDFPAQLIARGEALAGAGYCATCHTAKGG
                     ATYAGGYGMPTPFGVIYSTNITPDPETGIGRWSEAAFARAMHEGVARDGSHLFPAFPF
                     DHFTKVTDEDVKALYAYFMTRPPVRATPQSNTVPFPLNIRLLQAGWKLLFVANGRYQP
                     DTTKSAEWNRGAYLAEGLSHCGACHTPRNLLGAEKSSQAYAGAEIDGWIAPPLTDANP
                     APAPWSQADLFSYLRSGSSAVHGTAAGSMSPVVHDGLAKLPDSDIEAIATYFADINRS
                     ATRAVGSQASVISKAVSTSGLGIRQEPDPDARLYVAACGSCHYNSGAPLEVRPELALN
                     TALTLPEPTNFIRVVLDGIDIPDGMPGVMMPGFARALSDPDIARLAAYLRRTRTELPA
                     WTNIESQVTAIRKERPASQ"
     gene            1522..1989
                     /locus_tag="VIQ50_10965"
     CDS             1522..1989
                     /locus_tag="VIQ50_10965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012754141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEY9360945.1"
                     /translation="MTTFKLNDRSVSVNIAEDTPLLWVIRDEIGLKGTKFGCGIGMCG
                     ACTVHIDGRAVRSCITPLGAVANAAVTTIEGLDPNDQHPLQKAWIETQVPQCGYCQSG
                     QIMQAATLLKDFPDPSDKDIDAVMSGNLCRCMAYVRIRTAIKAAAAEMRGTHG"
     gene            1982..4273
                     /locus_tag="VIQ50_10970"
     CDS             1982..4273
                     /locus_tag="VIQ50_10970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012754142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY9360946.1"
                     /translation="MDEVLAVPAMKQNLVSRRSFLIGAAGTSVLFGFPRPGFTAADAA
                     STSPAALFEPTIWYRVDRSGIVTVSIIRAEMGQHVGTALARILADELEADWDKVRLDY
                     VDTDPKWGLMMTGASWSVWQTFMPFSQAGAAGRIALIEEAAKLLNVDKETCNARNGAV
                     SAGDRSITYGDIVARGSLKRTFSADQLKAMPIKKPADRRLIGHDTKAIDIPAKTNGAA
                     RYGIDAEVEGMVYARPKIPPTRYGSKVVSIDDSAAKSVKGYIKSIALDDPSDTVPGWV
                     MVFADSFFAADRAADKVKVEWIPGDAVKVSEQDLQDHGAKLIAEPSGGSLLVDDPGVE
                     AAFAAAKSSLQRTYTTSSVLHFQLEPVNALAFEKEGIFEVHTGNQWQSLILPVLARAL
                     AVGEDKVIMRTYLLGGGFGRRLNGDYAVPAALATKAIGKPVKMVCTRADDMLFDSFRS
                     PSIQTLRMAFGEGGKVTAMEHHAAAGWPTQVVMPSFMSKGVNNVPYDPFAIHGADHWY
                     DVGAQRLRALSNDLANRAFRPGYLRSVGSGWTNWALESFMDEAAHAAGIDPVAFRLRL
                     LDGTGRNAGTAPNSVGGARRQAAVLERAAEKGGWGSTMPKDTGLGIATTFGQERTMPT
                     WQACVARVRVDRGRGNVILEKLTLVVDAGTIVHPDGALAQVEGAALWGVSLTLHEGSE
                     FVKGRVKDTNLDTYTPLRMGDVPEMDIEFLPSTEVPTGLGEPATTVVGPAIGNAIFAA
                     TGARLRHLPIRPDAVLRALNTKS"
     gene            4353..>5057
                     /locus_tag="VIQ50_10975"
     CDS             4353..>5057
                     /locus_tag="VIQ50_10975"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEY9360947.1"
                     /translation="MITRRNFLGTTAIIGAAGTTILGGQEFKPVANAAAAGAPESPAP
                     SGASGSTVGTYLATRLEQVGVRDYFVVPGDFNLILLDQILENPRLRMIGCCNELNAGY
                     AADGYARSNGVAAMVVTYSVGGLSALNAVTCAYAEDLPVIVIVGGINSDSEWQDKIIH
                     HALGEVRYDYQREIYAHVTAGAFSVRHAADAPAVIDGAIDLALRRRKPVMLEIACNLA
                     SMPVPAPRPRRFGAAPA"
BASE COUNT          956 a         1585 c         1589 g          927 t
ORIGIN      
        1 gccaagtaat cggcggcatc ggcgcaagct tcgatactcc gggagcacga cgtacagatc
       61 ggtcaagcag gactcgccgc gctcaaccgt taagccaccg gagacaccca acgcggcact
      121 gaaatctgcg tcggaatgag cgtagatcag tcataggtat tggagcacgt cgttctttgc
      181 ataagatcgc tacgtggcgc ggacggctag ccatcggttt cctggggctg tgcgttcttg
      241 gcgcgttggg gtttctcgcc ttggcctggc gatcaagcat cgcgccgatc gatcctcccg
      301 cctccacgga ctttccggcc caattgatcg ccaggggcga ggctctcgcc ggcgcaggat
      361 attgcgccac ctgtcatacc gctaagggtg gtgcgactta tgccggcggt tatggcatgc
      421 cgacaccatt cggcgtcatc tattcgacta acatcacacc tgatcccgag accggcatcg
      481 gccgctggtc cgaggcggca tttgcacgcg cgatgcacga aggcgtcgct cgcgatggct
      541 cgcatctctt tcccgccttt cctttcgacc acttcacgaa ggtcactgat gaggacgtga
      601 aggcgctcta tgcatatttc atgacgcggc cgccggtccg ggcgacgccg caatcgaaca
      661 ccgtaccttt cccgctcaac atccgtctgc ttcaggccgg ctggaagctc ctcttcgttg
      721 cgaacgggcg ctatcagccg gataccacga agagtgcaga atggaatcgc ggggcctatc
      781 tcgccgaggg gctgagccat tgtggcgcgt gtcacacgcc tcgcaatctt cttggagcag
      841 agaagtcttc ccaagcctat gctggcgccg agatcgacgg ctggatcgca cctcctctga
      901 cggacgcaaa cccggcgccg gcgccctggt cgcaagcaga tctcttcagc tatctgcgca
      961 gcggatcgag cgctgtgcac ggtaccgcgg cgggctcgat gtctcccgtg gtgcatgatg
     1021 ggcttgccaa gctccccgat tccgacatcg aagcgatcgc cacatatttt gccgatatca
     1081 accgatcggc tacccgcgct gtcgggtctc aagcgtcagt catctccaag gctgtgagca
     1141 cgtctggtct cgggattagg caggagccag atccggatgc ccgtctttac gtcgccgcct
     1201 gtggctcttg tcactacaac agcggagcgc cactcgaggt ccggccggag cttgcactca
     1261 acaccgcgtt gaccttgcct gaacctacta acttcattcg tgttgttctc gacggcatcg
     1321 atatcccgga cggtatgccc ggggtgatga tgcccggctt cgcccgtgca cttagcgacc
     1381 ccgacattgc acggttggcc gcatatctgc ggcggacgcg cacagaactt ccagcctgga
     1441 cgaacatcga gagccaagtg acagcaatcc gcaaggaacg accggcgtca caatgagaaa
     1501 tccgtttgga gccgtgtaac catgaccacc ttcaaactca atgaccggtc cgtttcggtc
     1561 aatatcgccg aggacacacc gctcctgtgg gtcatccgcg atgagatcgg actcaagggc
     1621 acgaaattcg gctgtggcat cggcatgtgc ggcgcatgca ctgtgcacat tgatggacgc
     1681 gcggtccgct cctgcatcac gccgctcggc gcagtggcga acgcggcggt cacgacgatc
     1741 gaggggctcg acccgaacga tcagcatcca ctgcaaaagg cctggattga gacgcaggta
     1801 ccgcaatgcg gatattgcca gtctggacag atcatgcagg ccgcaacact gctcaaggat
     1861 tttcccgacc cgagcgacaa ggacatcgac gccgtcatga gcggcaacct gtgcaggtgc
     1921 atggcctatg tccgcatccg cacagcgatc aaagccgctg ccgccgaaat gcgaggcaca
     1981 catggatgag gtgctcgcag tcccggcaat gaagcaaaat ctggtatccc gtcgtagctt
     2041 cctgatcggc gcagcaggaa cgagcgttct gtttggtttc ccgcgtcccg gctttacagc
     2101 cgccgatgct gcttcgacct ctccggccgc actgttcgag ccaacgatct ggtaccgcgt
     2161 cgatcgcagc ggcatcgtca ccgtctcgat catccgggcc gagatgggcc agcacgtcgg
     2221 caccgccctt gcgcgcatct tagccgacga gctcgaggcg gattgggaca aggtgcggct
     2281 cgattatgtt gataccgatc ccaagtgggg tctgatgatg accggcgcca gttggtcggt
     2341 gtggcagact ttcatgccgt tcagccaggc cggcgctgca ggtcgcatcg ctctgatcga
     2401 agaggccgcc aagcttctca acgtagacaa ggaaacgtgc aacgcgcgca acggcgccgt
     2461 cagcgctggt gatcgctcga ttacatacgg cgacatcgtc gcgcgcggct ccctgaaacg
     2521 cacctttagc gccgaccagt tgaaggcgat gccgatcaag aaaccggccg accgccgtct
     2581 gatcggtcac gacaccaagg ccatcgacat tccggcgaag accaacggag ccgcgcgcta
     2641 cggcattgat gccgaagtcg agggcatggt ctatgcgcgg ccgaagatcc cgccgacgcg
     2701 ctatgggtcc aaggttgtct cgatcgacga ttccgccgcg aaatcggtga agggatacat
     2761 caagagcatc gcgctcgacg acccgtccga tacggtgccg ggatgggtca tggtctttgc
     2821 cgactcgttt ttcgccgccg accgagccgc cgacaaggtg aaggtggagt ggatccccgg
     2881 cgatgcggtg aaagtctccg agcaggattt gcaggatcac ggcgcgaagc ttatcgccga
     2941 gcccagcggc ggatcactgt tggtggacga tccaggtgtc gaggccgcgt tcgccgccgc
     3001 gaagtcgagc ttgcagcgaa cctacacgac gagcagcgta ctgcatttcc aattggagcc
     3061 ggtcaatgcg ctcgctttcg agaaagaggg cattttcgag gtccacaccg gtaatcaatg
     3121 gcaatcgttg atcctgcctg tgctggccag ggcgctggcc gtcggcgagg acaaggtcat
     3181 tatgcgcact tatctcctcg gcgggggctt cgggcgtcgc ctcaacggcg actatgccgt
     3241 gcccgcagcg ctcgccacca aggccatcgg caagccggtc aagatggtct gcacgcgggc
     3301 cgacgacatg ctgttcgact cgttccgctc gccgtcgatc cagacgctgc gcatggcctt
     3361 cggtgaaggc ggcaaagtga cggcgatgga gcatcatgcc gccgccggct ggcccacgca
     3421 ggtcgtgatg ccgagcttta tgtcgaaggg tgtaaacaac gtaccctacg atccattcgc
     3481 gattcatggg gccgatcact ggtacgatgt gggagcgcaa agacttcgcg ctctctcgaa
     3541 cgatctcgcg aaccgcgcct ttcgcccggg ctatctacgc tcggtcggct cgggctggac
     3601 caattgggcg ctcgaaagct tcatggacga agcggctcac gcggcgggca ttgaccctgt
     3661 cgcgttccgc ctccgcctgc ttgacggcac cggccggaat gcaggcaccg cgccgaactc
     3721 ggtcggcggc gcgcggcggc aggccgcagt cctcgaacgc gcagcggaga aaggcggctg
     3781 gggcagcacg atgccgaagg ataccgggct cggcatcgcg acgaccttcg gtcaggaacg
     3841 cacgatgccg acgtggcagg cgtgcgtcgc ccgtgtccgc gtcgatcgtg ggcgcggaaa
     3901 tgtgattttg gagaagctca cacttgtcgt cgacgccggg accatcgtcc atccggacgg
     3961 cgcgctggcg caagtcgaag gcgctgcgtt gtggggtgtc agcctaacgc tgcacgaagg
     4021 ctcggaattt gtgaaaggcc gtgtgaagga caccaatctc gacacctata cgccactgcg
     4081 tatgggcgac gtgccggaga tggacatcga attcctgccc agcaccgagg tgccgacggg
     4141 ccttggcgag cctgcgacca ccgtggtcgg cccggcgatc ggaaacgcca tatttgccgc
     4201 caccggcgcg cgcctgcgcc acttgccaat ccgcccggat gcagttctgc gggctctcaa
     4261 cacaaagagc tgatcaatgt gggcggctct acgccggttc aagggtgaca tgacacgttg
     4321 cggccaagag agaacggtcg aaggaggcga gtatgattac gaggcgtaat ttcctaggca
     4381 cgacagcgat catcggggcc gccgggacga cgatcctggg cgggcaggaa ttcaagcccg
     4441 tcgcgaacgc ggcggcggcc ggggctcccg agagtcccgc gccgagtggg gcgagcggga
     4501 gtaccgtcgg cacctacctg gctacccggc tggagcaggt cggggtccgc gattatttcg
     4561 tcgtgcccgg cgacttcaac ctcatcctcc tcgaccagat cctcgagaat ccgcgcctga
     4621 ggatgatcgg ttgctgcaac gagttgaacg ctggttacgc cgccgacgga tacgcgcgtt
     4681 cgaatggtgt cgcggcaatg gtcgtcacct acagcgttgg cgggctgagc gccctcaacg
     4741 ccgtgacgtg cgcgtacgcc gaggatttgc cggtcatcgt cattgtgggc gggatcaaca
     4801 gcgactcgga gtggcaagac aagatcatcc accacgccct gggcgaggtg cgatacgact
     4861 atcagcggga gatctacgca catgtcacag ccggagcctt ctcggtgcgg cacgcggccg
     4921 acgccccggc cgtgatcgac ggggcgatcg acctcgcgtt gcggcgtcga aagcctgtga
     4981 tgctggagat cgcatgcaac ctcgcttcga tgccggtccc ggcgccgcgt ccccggcgct
     5041 tcggcgcggc gccagcg
//
LOCUS       DATCWM010000558         2388 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_122906, whole genome shotgun sequence.
ACCESSION   DATCWM010000558 DATCWM010000000
VERSION     DATCWM010000558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2388)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2388)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2388
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122906"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..408
                     /locus_tag="VIQ50_10980"
     CDS             <1..408
                     /locus_tag="VIQ50_10980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360948.1"
                     /translation="SSNLAEALKARETSHAHAEQKIKVLTDRIAEMEAEANAYRAKAE
                     RRIDELSASLQSERVELAVAQGALETTRRDYMRLQRDILAGRSPQQTGPNLEVVSDTT
                     KEPQKIKNGKGAGGRKAAEAGPEAGAAEPDSTR"
     gene            546..2018
                     /locus_tag="VIQ50_10985"
     CDS             546..2018
                     /locus_tag="VIQ50_10985"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HEY9360949.1"
                     /translation="MVRVGDETSSKPRMHYHGLRGWLEHVDKLGELRRVDGAHWDVEM
                     GAITHMLTETSRGSAPAILFDSVPGYPKGFRTLYGQLSSVRRIALTLGLPLEYERKVD
                     VVRTYHARMQNLKPLPPRFVNDGPVLENVIEGDDVDVLRFPVPRHHELDKARFIGTAD
                     CVMTQDPDSGWFNLGAYRSQVYDGKTVGCQITEGKHGRIHRDKYFERGQPMKVVILCG
                     QDPLLFMLASSPLPEVGEMDIAGGLRGEPVDVVRGPYTGFPIPADCEIAIEGETMPGQ
                     VRPEGPFGEWMGYYSDDTQERPFVNVKTILYRNDPILTCAPQHKPVDETGLLKGIAGA
                     AQIWRSLEACGVPEVLGVWNHEAGPATRFTAIQIRQRYPGHARQALHIASSCQGGAYA
                     GKWTVVVDEDIDAGDLDQVLWAMCTRFDPLTDIDLIQKAWASKRDPLFLPGNFNNRIL
                     IDACIPYDRKFKGTFPITVDVSADLRKRLRSKFPQLFAKH"
     gene            2041..>2388
                     /locus_tag="VIQ50_10990"
     CDS             2041..>2388
                     /locus_tag="VIQ50_10990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015315449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360950.1"
                     /translation="MGGRSSAFTVDRRVSGRALCVLTVVLFAVVAAQPASSAGVEDFY
                     KGKTISLLIGYSVGGGYDTYGRLVARHLGKHIPGNPIIVPQNMTGAGSLKAANYLYSV
                     APKDGSVIGTFSRS"
BASE COUNT          464 a          771 c          759 g          394 t
ORIGIN      
        1 tcgagcaatc tggcggaagc gctcaaggcg cgcgagacct cgcatgctca cgccgagcag
       61 aagatcaagg tgctgaccga ccgcatcgcc gaaatggagg ccgaagccaa cgcgtaccgg
      121 gccaaggcag agcggcgcat cgacgagctc agcgcaagcc tgcaaagcga gcgtgtcgag
      181 cttgccgttg cccagggcgc gctcgagacc acgcgtcggg actacatgcg gctgcaacgc
      241 gatattttgg ccggacggtc gccgcaacaa acgggtccca atctcgaagt ggtatcggat
      301 acgaccaaag agccgcagaa gattaaaaac ggcaaaggcg ccggcggccg caaggcagca
      361 gaggcgggac cggaggccgg cgcggcggag cccgactcca cgcgatagct agccgagatt
      421 gacgccgccg ctcgcgcggc gacgcgcccg cgggacgcgt tcacgtgccg gcgcaaccgg
      481 cgctttgccc gcggatttgg acggctgtat agatgtcgcg cattgccgag ggaacggaga
      541 gcagcatggt ccgggtcggc gacgagacat catcgaaacc gcggatgcac taccatggac
      601 tgcgcggctg gctcgaacac gtcgacaagc tgggggagtt gcgcagggtc gacggcgctc
      661 attgggacgt ggagatgggc gccatcacgc atatgctcac ggaaacgagc cgcggcagcg
      721 cccccgcgat cctgttcgac agtgtgccgg gctatcccaa aggcttccgc acgctctatg
      781 ggcagctttc ctccgtccgt cgcatcgcct tgacgctcgg gctgccgctc gaatacgagc
      841 gcaaggtcga cgtcgtgcgg acctatcacg cgcgcatgca aaatctcaag ccgttgccgc
      901 cgcggttcgt gaacgacggc cccgtgctcg aaaacgtgat cgaaggcgac gatgtcgatg
      961 tgctgagatt tccggtgccg cgccaccacg agctcgacaa ggcgcgcttc atcggcaccg
     1021 ccgactgcgt gatgacgcaa gaccccgact cgggctggtt taatctcggc gcttatcgca
     1081 gccaggttta cgacggcaag accgtcggct gccagatcac cgaaggcaaa catggccgca
     1141 ttcatcgcga caaatatttc gagcgcgggc agccgatgaa ggtggtgatc ctgtgtgggc
     1201 aggacccgct gctgttcatg ctcgcttcga gcccgctgcc ggaagtcggc gagatggaca
     1261 tcgccggcgg cttgcgcggg gagccggtcg acgtggtgcg cggcccgtat accggctttc
     1321 cgattccggc cgactgtgaa atcgccatcg aaggcgagac catgcccggg caggtccggc
     1381 cggaagggcc gttcggcgaa tggatgggct actactccga cgacacgcag gagcgcccct
     1441 tcgtcaacgt caaaacgatc ctctaccgca atgatccgat cctgacctgc gcaccgcagc
     1501 acaagccggt cgacgaaacc ggcctgctca aggggatcgc cggagcggcg caaatctggc
     1561 gctcgctcga ggcctgcggc gtgcccgagg tgctcggggt gtggaatcac gaagccgggc
     1621 ccgcaacccg cttcactgcg atccagatac gccagcgcta tcccggtcac gcgcgccagg
     1681 cgctccacat cgcatcctcc tgccagggcg gcgcttacgc cggcaagtgg acggtggtgg
     1741 tcgacgagga catcgatgcc ggcgatcttg atcaggtgct gtgggcgatg tgcacgcgat
     1801 tcgatccgct taccgacatc gatctcattc aaaaggcctg ggcctccaag cgcgatccgc
     1861 tcttcctccc cggcaatttc aacaaccgca tcctcatcga tgcctgcatt ccctatgaca
     1921 ggaagttcaa gggaacgttc cccatcaccg tcgacgtcag cgccgatctg cgcaagcgct
     1981 tgcgatcgaa atttccgcaa ctgtttgcca aacattgagc gggagcagtt ggttcgcagc
     2041 atgggcggac gctcgagcgc attcacagta gaccgtcgcg tctccggacg cgcgctatgc
     2101 gttctcacgg tcgtgctctt cgccgtagtt gcggcgcagc ccgcttcctc tgccggggtc
     2161 gaggacttct acaaaggcaa gaccatatcg ctcctgatcg gctacagcgt gggcggcggc
     2221 tacgatacct atggacggct ggtggcgcgc cacctcggca agcatattcc cggcaatccc
     2281 attatcgtgc cgcagaacat gaccggcgcg ggcagcctca aggcggccaa ctatctctat
     2341 tcggtcgctc ccaaagacgg ctccgtcatc ggcacgttct cgcggagc
//
LOCUS       DATCWM010000559         6715 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_290378, whole genome shotgun sequence.
ACCESSION   DATCWM010000559 DATCWM010000000
VERSION     DATCWM010000559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6715
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_290378"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1526
                     /locus_tag="VIQ50_10995"
     CDS             <1..1526
                     /locus_tag="VIQ50_10995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008962811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HEY9360951.1"
                     /translation="LTRVLERGRNAIETIVRMVIMQLVPTIIELALILVVLLYQFDWR
                     YVVVILGLIALYMAFTYQATEWRINIRRRMNDSDTDANVKAVDSLLNYETVKYFVAEE
                     REAARYDRSMARYEEASVQAYVSLAVLNAGQAAIFTVGLATVMVMCAYGIKEGTNTVG
                     DFVMINAMMIQLYQPLNFMGMVYREIKQAVIDIERMFAILAREPEIKDKPGAKPLAIK
                     RGAISFENISFAYEPGRQILKGLSFEVPAGHRVAVVGPSGAGKSTLSRLLFRFYEVSG
                     GRILVDGQDIRDVTQTSLRSAIGIVPQDTVLFNDTIRYNIRYGRWQASDAEVEAAARL
                     AQIDDFIRLSPKGYDTEVGERGLKLSGGEKQRVAIARTILKAPPILVLDEATSALDSH
                     TEKDIQDALEQVSQNRTTLVIAHRLSTIVEADDIIVLDEGTIIERGTHHQLLANGGLY
                     ASMWNRQREAAAAREKLALVDDEVVAPNRNPPELEEADLPIDKELSGPPIERADAAE"
     gene            1529..2227
                     /locus_tag="VIQ50_11000"
     CDS             1529..2227
                     /locus_tag="VIQ50_11000"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HEY9360952.1"
                     /translation="MSVLASIRSQLAPVHREGLPFVGIFAVVSLLAFWLSPPLGWLGF
                     VATLWCAYFFRDPARVTPLREGILVAPADGRVSRVVEAMPPKELGLGERLLPRVSIFM
                     SVFDCHINRSPLAGKIERIIYHAGAFVNADLDKASESNERNSFLIASNGGRIAVVQIA
                     GLVARRIVSFVREGATVAAGERIGMIRFGSRVDVYLPVGTRPLVAEGQTAIAGETVIA
                     DLAAGDAQRSFRVD"
     gene            2299..3207
                     /gene="pssA"
                     /locus_tag="VIQ50_11005"
     CDS             2299..3207
                     /gene="pssA"
                     /locus_tag="VIQ50_11005"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003882 - CDP-diacylglycerol-serine
                     O-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HEY9360953.1"
                     /translation="MPFSPFDRGSFPRQRGRFRLIPVRTLVPNLITLLALCAGLTAIR
                     LALEDKLEWAVAAIVFAALLDGVDGRVARMLRGTSRFGAELDSLADFVNFGVAPALML
                     YFWGLRELGNLGWIAGLVFAISTGLRLARFNVMVDDPNKPPWAATFFTGVPAPAGAIT
                     VLLPIYVYFLGVPRLPGTASLTFVYTFAIAMLMVSRLPVFSGKRVGKRVAPEMVLPVF
                     VMVVLFFALLISYPWVVLTIGTVCYLASLPFGYLSYRHHQRKDAASAGAAAGAAAQPH
                     AHNETPEVLPGHGGQAPDSNRRARLN"
     gene            complement(3373..4017)
                     /locus_tag="VIQ50_11010"
     CDS             complement(3373..4017)
                     /locus_tag="VIQ50_11010"
                     /EC_number="2.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006933612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043295 - glutathione binding [Evidence
                     IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HEY9360954.1"
                     /translation="MAEYQLFCFAQSGNAYRAALMLNLIRADWEPVWVDFFNGETRSP
                     QYRANVNEMGEVPVLGHQGKKLSQSGVILTYLADRSGQFRPESEDARREALRWIIFDN
                     QKVNGFLGPYRFLRCFAKPPGDPAVLAFLKGRIDNNVAILDKRLASAPFVLGAHPTIA
                     DLSLVAYLYYPAEEFGFDIPAQHKNIAVWLDRIKALPGWKHPYDLMPGHPLPGR"
     gene            complement(4185..5681)
                     /locus_tag="VIQ50_11015"
     CDS             complement(4185..5681)
                     /locus_tag="VIQ50_11015"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002964909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018478 - malonate-semialdehyde
                     dehydrogenase (acetylating) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-acylating methylmalonate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEY9360955.1"
                     /translation="MREIGHFIGGKRVAGTSGRSGDVFNPNTGEVQAKVSFAKGSEVE
                     AAIANAEAAQGAWAAVNPQRRARVLFKFLELVQREFDSLAKLLSSEHGKTIADSKGDI
                     QRGLEVVEFACGIPHLLKGEFSESAGPGIDLFSLRQPLGVVAGITPFNFPAMIPMWKF
                     APALACGNAFILKPSERDPSVPMRLAELLVEAGLPAGVLNVVNGDKEAVDTLLTDPRV
                     RAIGFVGSSAIAEYIYTTGCAHGKRVQCFGGAKNHMVVMPDADMDQAVDALIGAGYGS
                     AGERCMAVSVAVPVGEKTADILVDKLIPRVESLKVGPSSDPQADYGPMVTKAQLDKVK
                     SYVDLGIKEGAKLKVDGRRFKLQGYEGGFFMGGCLFDEVTPDMRIYKEEIFGPVLSVV
                     RAKTYDEALRLPSEHDYGNGVAIFTRDGDTARDFATRVNVGMVGVNFAIPVPLSYYTF
                     GGWKRSGFGDLNQHGPDAVRFYTKTKTVTSRWPSGIKEGAEFVIPTMK"
     gene            5960..>6715
                     /locus_tag="VIQ50_11020"
     CDS             5960..>6715
                     /locus_tag="VIQ50_11020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HEY9360956.1"
                     /translation="MAQVANDTTASGAAASAIPHVPHEKSTLWALVLGSVGVVYGDIG
                     TSPLYAFRVAVTAAVESGPVRRDIVLGVLSLILWALIVVVAIKYVLILLRADNNGEGG
                     TLSLTALASRALGRRTAVVFLLGVVGASMFLGDAVITPAISVLSAVEGLTLVTPAFEH
                     YVAPLTIVILLGLFAAQSRGTARVASFFAPVMVVWFVAIAAAGVLHIHDDPAVLAAIN
                     PAYALAFLYGHGHVGLVTLGLVFLVVTGAEALYA"
BASE COUNT         1093 a         2206 c         2154 g         1262 t
ORIGIN      
        1 gcctgacgcg cgtgctcgag cgcgggcgca acgccatcga gaccatcgtg cgcatggtta
       61 tcatgcagct cgtgccgaca atcatcgagc tggcgctgat cctcgtcgtg ctgctctatc
      121 agttcgattg gcgatacgtc gtcgtcatcc taggtctgat cgcgctttat atggcgttca
      181 cctatcaggc gaccgaatgg cgcatcaaca tccgccggcg gatgaacgac agcgacaccg
      241 acgcgaacgt caaggcggtc gactcgctgc tcaactacga gacggtgaaa tacttcgtcg
      301 ccgaggagcg cgaagccgct cgttacgacc gttcgatggc acgctacgag gaagcgagcg
      361 tgcaggccta tgtgtcgctc gcggtcctca atgccggcca agcggcgatc ttcacggtcg
      421 ggctcgccac cgtcatggtg atgtgcgcct acggcatcaa ggagggcacc aataccgtcg
      481 gcgacttcgt catgatcaac gccatgatga ttcagctcta ccagccgctc aatttcatgg
      541 gcatggtcta tcgcgagatt aagcaggcgg tgatcgacat cgagcggatg ttcgcgatcc
      601 tcgcgcgcga gccggagatc aaggacaagc ccggcgccaa gccgctcgcg atcaagcgcg
      661 gggcgatcag cttcgagaac atctctttcg cctacgaacc cggtcggcaa atcctcaagg
      721 ggctcagctt cgaggtgccc gccggacatc gggtggcggt ggtcggtccc tcgggcgccg
      781 gcaaatcgac cctctcgcgc ctgctgttcc gcttttacga ggtcagcggc ggccgcattt
      841 tggtcgatgg ccaggacatc cgcgatgtca cgcagacgtc gctgcgctcc gccatcggca
      901 tcgtgccgca ggacacggtg ctgttcaacg acacgatccg ttacaacatc cgctacggcc
      961 gctggcaagc gagcgatgca gaggtcgagg cggcggcgcg gctcgcgcag atcgacgact
     1021 tcatccgcct ctcgcccaag ggctacgaca ccgaggtggg cgagcgcggc ctcaagctct
     1081 ccggcggcga gaagcagcgt gtcgccatcg cccgcacgat cctcaaagcg ccgccgatcc
     1141 tggtgctcga cgaggccacc tccgcgctcg atagtcatac cgagaaggac atccaggacg
     1201 cgctcgaaca ggtatcgcag aaccgcacca cgctcgtcat cgcgcatcgg ctctcgacca
     1261 tagtcgaggc ggacgacatc atcgtgctcg atgaagggac gatcatcgag cgcggcaccc
     1321 atcaccagct gctggcgaat ggcggcctct atgccagcat gtggaaccgt cagcgcgagg
     1381 ccgcggcggc gcgcgagaag ctcgcgttgg tcgacgacga ggtcgtcgcg cccaaccgca
     1441 atccgccgga gctggaggag gccgatctgc cgatcgacaa ggagctctcc ggacctccga
     1501 tcgaacgcgc cgacgcggcg gaatgacgat gtcggttctt gcctccatcc gttcccaact
     1561 cgcgccggtg catcgcgaag gcctcccctt cgtcggcatc ttcgccgtgg tgagcctgct
     1621 ggcgttctgg ctctcgccgc cgctcggctg gctgggcttc gtggcgacgc tctggtgcgc
     1681 ctatttcttt cgcgatcccg cacgcgtgac gccgctgcgc gaaggcatcc tggttgctcc
     1741 cgcggacggg cgggtgagcc gggtggtcga ggcgatgccg ccgaaggagc tcggattggg
     1801 cgagcggctg ctgccgcggg tgtcgatctt catgagcgtg ttcgactgtc acatcaaccg
     1861 cagcccgctc gccggcaaga tcgagcgcat tatctatcac gccggtgcct tcgtgaacgc
     1921 cgacctcgac aaggcgagcg agagcaacga gcgcaacagc tttctcatcg ccagcaacgg
     1981 agggcgcatc gccgtggtgc aaatcgcagg cctggtggcg cgccgcatcg tctctttcgt
     2041 gcgcgagggc gcaaccgtcg ccgctggcga gcgtatcggc atgatccgct tcggctcacg
     2101 ggtggacgtc tatctgcccg ttggcacgcg gccgctcgtt gcggagggcc agacggcgat
     2161 tgccggcgag acggtgattg ccgatcttgc cgccggcgac gcgcagcgca gcttccgcgt
     2221 cgattaacct attaatcagc aatggttaat cggcggcgac cctggcggcg ccacgaacca
     2281 ttcgctatga tttccgccat gccgttctcg ccattcgacc gtggctcatt cccccgccag
     2341 cgcgggcgct tccgcctcat tccggtgcgc acgctggtgc cgaacctgat cacgctactc
     2401 gcgctatgcg ctggactgac ggcgatccgg cttgccctcg aggacaagct cgaatgggcg
     2461 gtcgctgcca tcgttttcgc cgcgctgctc gacggcgtcg acggccgcgt cgcgcgcatg
     2521 ctcaggggca cctcgcgctt cggcgccgag ctcgacagcc tcgccgactt cgtcaatttc
     2581 ggcgtcgcgc cggcgctgat gctttacttc tgggggctgc gagagctcgg caatctgggt
     2641 tggatcgccg ggctggtgtt tgcgatctcg acggggctgc ggctcgcgcg cttcaacgtc
     2701 atggtcgatg acccaaacaa gccgccctgg gcggcaacgt tcttcacggg cgtgccggcg
     2761 ccggccggcg ccatcaccgt cctgctgccg atctatgtct atttcctcgg ggtgccgcgc
     2821 ctgcccggta cggcctcgct gacgttcgtc tacaccttcg ccatcgccat gctgatggtc
     2881 tcccggttgc cggtcttctc cggcaaacgc gtcggcaagc gggttgcgcc cgagatggtg
     2941 ctcccggttt tcgtcatggt ggtgctgttc ttcgcgctgc tcatttccta tccctgggtg
     3001 gtgctcacca tcggcaccgt gtgttatctg gcaagcctgc cgttcggcta cctgtcctat
     3061 cgccaccacc agcgcaagga cgcggcaagc gcgggtgccg cggcgggcgc tgccgcgcag
     3121 cctcatgcgc acaacgaaac gccggaggtg ttgcccggac atgggggaca agcgcccgac
     3181 tcgaatcggc gcgcccggct caattgatgc acggacggag tgcacgagcc gccgtcgtcg
     3241 tccgtcattg ccgggcttga cccggcaatc atctccttcg cgaatagcct tttgccaagt
     3301 aggtggaccc gcgggtcata agcgcgtcca cgcgcgtctt cgacgcgctt ctgcccgcgg
     3361 gtgacgcagc gctcatcgcc ccggaagcgg gtgccccggc atgagatcgt aagggtgctt
     3421 ccagcccggc agcgccttga tgcgatcgag ccaaaccgcg atgttcttgt gctgggcggg
     3481 aatgtcgaag ccgaactcct cggccggata gtagagataa gcgaccagtg aaagatcggc
     3541 gatggtcggg tgcgcgccga ggacgaacgg cgcactcgcg aggcgcttgt cgagaatggc
     3601 aacgttgttg tcgatgcggc ccttgaggaa tgcgagcacg gccggatcgc cgggcggctt
     3661 ggcgaaacac cgcaagaacc gatagggccc gagaaagccg ttgaccttct gattgtcgaa
     3721 gatgatccag cgcagtgcct cgcgccgcgc atcctcgctc tcggggcgga attgacccga
     3781 ccgatcggcg agataggtca ggatcacgcc ggactggctg agtttcttgc cctgatgccc
     3841 gaggaccgga acctcaccca tttcgttgac gttggcgcgg tattgcggcg agcgcgtctc
     3901 gccattgaaa aaatcgaccc acaccggctc ccaatcggcg cggatcaggt tgagcatcaa
     3961 tgcggcacga taggcgttgc cggattgcgc gaagcaaaag agctggtact cggccatggc
     4021 ggtcctttgt tggtcaccaa tacgacttgc gttgctgtgt gatcctcggg cagcggcccc
     4081 tctcccgcac cgaacacggg cctgcccgag ttcggtcctt caaatcggcc gaagtcagat
     4141 aaatccgact tcggctggga gagggtgatc gagcgcgagc gcgctcactt catcgtcgga
     4201 atgacgaact ctgcgccttc cttgatgccg gagggccagc gcgaggtcac cgtcttcgtc
     4261 ttggtgtaaa aacgcaccgc atccggcccg tgctggttga gatcgccgaa gcccgagcgc
     4321 ttccagccgc cgaacgtata ataggagagc ggcacgggga tcgcgaagtt cacccccacc
     4381 atgccgacat tgactcgcgt tgcgaagtcg cgtgcggtgt cgccgtcgcg ggtgaagatg
     4441 gcaacgccgt tgccgtagtc gtgctcggag ggaagccgca acgcctcgtc gtaagtcttg
     4501 gcgcgcacga ccgagagcac cggcccgaag atttcctcct tgtagatgcg catgtcgggc
     4561 gttacctcgt cgaacaggca gccgcccatg aagaagccgc cttcgtagcc ctgcagcttg
     4621 aagcggcgcc cgtcgacctt gagcttggcg ccttccttga tgccgaggtc gacgtagctc
     4681 ttcaccttgt cgagttgcgc cttggtgacc atcggcccgt agtcggcctg cggatcgctc
     4741 gagggcccga ccttcaagct ctcgacgcgc gggatgagct tgtcgacaag aatatccgcg
     4801 gtcttctcgc cgaccggcac cgccaccgag accgccatgc agcgttcgcc ggccgaacca
     4861 tagcctgcgc cgatcagcgc atcgaccgct tgatccatgt cggcatccgg catcaccacc
     4921 atgtggttct tggcgccgcc gaagcactgc acgcgtttgc cgtgggcaca gccggtggtg
     4981 tagatgtatt ccgcgatcgc cgaggagccg acgaagccga tcgcgcgcac gcgcggatcg
     5041 gtgagcagcg tgtcgaccgc ctccttgtcg ccgttgacga cattgagcac ccccgccggc
     5101 agcccggctt cgacgaggag ttcggcaagc cgcatcggca cagatggatc gcgctccgac
     5161 ggcttgagaa tgaaggcgtt gccgcaggcc agcgcgggcg cgaacttcca catcgggatc
     5221 atggctggga agttgaacgg cgtgatgccg gcaacgaccc cgagcggctg gcgcagcgag
     5281 aacaggtcga tgcccggccc ggcgctctcg ctgaattcgc ctttgagcag gtgcgggatg
     5341 ccgcaggcaa attccaccac ttccagtccg cgctggatgt cgcccttgga gtcggcgatg
     5401 gtcttgccgt gctccgagga cagcagcttg gcgaggctat cgaattcccg ctgcaccagc
     5461 tcgaggaact tgaacagcac gcgtgcgcgg cgttgcgggt tgaccgctgc ccaggcgcct
     5521 tgcgccgcct cggcgttggc aatcgccgct tccacttccg accccttggc gaagctgacc
     5581 ttcgcctgca cctcgccggt attggggttg aacacgtcgc cgctgcggcc ggatgtgccc
     5641 gccactcgtt taccgccgat gaaatgaccg atttcgcgca tcaggcctcc tccgatgtct
     5701 ggctcgcatt gcggagccgt tatctcccgc ttgggatagc gcagccggcg tggcgcggga
     5761 agcgggcgaa cctgaggcaa ccgaccggcc gtccatggct cgcggtaaga gctgggtgat
     5821 cgatctcgct gaacacctga aaaggggcgc cgtgcgcgcg ccgccagcgg aactcctctt
     5881 gcgaggacat gttatccgcc ggtaggtggt gttataagcc gccccgtttg cttgcggtgc
     5941 gtcgagactg accaagccca tggcccaggt agcgaacgat accaccgcct ccggcgcggc
     6001 cgcttcggct atcccccacg tgccgcatga gaaatcgacg ctgtgggcat tggtgctcgg
     6061 cagcgtcggc gtggtgtatg gcgacatcgg cacgagcccg ctttatgcgt ttcgcgtggc
     6121 cgtcaccgca gccgtcgagt ccgggcctgt gcggcgcgac atcgtgctcg gcgtcctctc
     6181 gctgatcctg tgggcgctga tcgtggtggt ggcgatcaaa tacgtcctca tcctgttgcg
     6241 ggccgacaac aacggcgagg gcggcaccct ttcattgacc gcgctggcaa gccgcgcgtt
     6301 gggacggcgc acggcagtgg tatttctgct cggcgtcgtc ggcgcctcga tgttcttggg
     6361 cgacgccgtg atcacgccgg ccatttccgt gctgtccgcg gtcgagggat tgacgctggt
     6421 cacgcctgcc ttcgagcact atgtggcgcc cttgaccatc gtgatcctcc tcggcttgtt
     6481 cgccgcgcaa agccgaggga ccgcccgggt cgcgagtttt ttcgcaccgg tcatggtggt
     6541 ctggttcgtc gcaatcgcag ccgccggggt tctccacatt cacgatgacc ccgccgtgct
     6601 cgcagccatc aatccggcct acgcgctggc gtttctctat ggccacggcc acgtcgggct
     6661 cgtgacgctc ggcctcgtct tcctcgtcgt caccggcgcg gaggcgcttt acgcc
//
LOCUS       DATCWM010000560         2591 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_344402, whole genome shotgun sequence.
ACCESSION   DATCWM010000560 DATCWM010000000
VERSION     DATCWM010000560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2591
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_344402"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            181..270
                     /locus_tag="VIQ50_11025"
     tRNA            181..270
                     /locus_tag="VIQ50_11025"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:215..217,aa:Ser,seq:tga)
     gene            448..888
                     /locus_tag="VIQ50_11030"
     CDS             448..888
                     /locus_tag="VIQ50_11030"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY9360957.1"
                     /translation="MTSQNVWQLIAYIALLNSAPALAEDKPMGDIKELAAVKFAQDSD
                     VKCLQSALEAGDPIKGSSSFILKAPPACVVPWHYHTAQEQLIIIRGTVLAEMTDHPPT
                     RLGPGGFAVMGGHMAHQFTCQGKAACVMFVTFDRTYDIFWGKGD"
     gene            1392..>2591
                     /locus_tag="VIQ50_11035"
     CDS             1392..>2591
                     /locus_tag="VIQ50_11035"
                     /inference="COORDINATES: protein motif:HMM:NF012339.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEY9360958.1"
                     /translation="MIRRLRLASGLVMLAYVTTHFVNHSLGLISVQAMDRALVEIYQY
                     WASPLGGVLLYGAFAIHYSLALWALWLRRSLKMPLAEATQLVLGFSIPFFLIDHVLQT
                     RVADTFYGADVGYYATVLHKYFVTNPLRGVLQLVVLVIAWVHAMIGLWFWLRLKPWYR
                     RWQPILYAFALLLPTLAILGFFEGGRQVAALSEDPAWVAQQAQDHPPAAPANAAIVDQ
                     MVVWVRYFFVAALLAVLAARFARWRWQRRRGVIRVSYPSGRVVQIVRGVSVLEASRMA
                     GIPHASVCGGRGRCSTCRIRVEGAQEALVPAAPEEVKVLRRVGAAPDVRLACQLRPQG
                     DLRVTPLLPATAQASDGFHRPGYLHGAERDIAILFGDLRSFTQLSEKKLPYDLVFLLN
                     RYFAETGH"
BASE COUNT          445 a          802 c          809 g          535 t
ORIGIN      
        1 caaaccggac atcacattgc gcatttacgc gcacctgttc cgtaacgacg acagcaaagc
       61 cgcggcagct atcaacgcgg cgttccgcta accaaatggt agcaaacggg tagcaaacgg
      121 gccgatgttc gagcaatgtt ctatcaggag cactcgctaa ctgattgaga tcattagaat
      181 ggaagggtgg ccgagtggtt taaggcagcg gtcttgaaaa ccgccagggg cgcaagcccc
      241 tcgtgggttc gaatcccacc ccttccgcca gctcactgtc ttaagccgtc catccacgtc
      301 catgagcgtc acttttaagc ccacaatggc ttcctcgtct ttgcgtgcga ggtcgattgc
      361 atcgaatcgc gcccttgtat cgcactgttc gcccgccctc gtgtggcttg cactatggta
      421 tgccgtcatg gcggcgaagg atgcaggatg acatcgcaga acgtttggca gctcatcgca
      481 tatatcgcgc tcctcaacag cgcgccggcg ctggccgaag acaagccgat gggcgacatc
      541 aaggagctcg cagccgtgaa gtttgcgcag gatagcgatg taaaatgtct gcagtcggcg
      601 ctcgaggccg gcgacccgat caaaggttcg tccagcttca tcctgaaagc gccgccggcc
      661 tgtgtggtgc cctggcatta ccatacggcg caggagcagc tgatcatcat ccgaggcact
      721 gtgctcgccg aaatgaccga tcatccgccg acacggctcg gacctggcgg ctttgcggtg
      781 atggggggcc acatggcaca tcagttcacc tgccagggca aggccgcatg cgtgatgttc
      841 gtcacatttg atcggaccta tgacattttc tggggcaaag gcgattgaga tcgtgccggg
      901 ccacagggac agagtgtcga ttacacgcta tgtttgaact gtgagcctgt gcgccgccgc
      961 ttgcggactg cgatcgcagg gtcgttcgca aacttgcgag aaggcgatgc atatcggact
     1021 attgcgtacc accgcggccg cagctttcct catttgcttc gtccgcggaa cgcttggcgc
     1081 cgacgccgga gcatccggcg cgcagacgtt attgacggcg ccgcaacacg cataattccg
     1141 cctcgacgcg aagcagatgg gctttcgaga gttcgagtaa cggcttaggc tttcgagtcg
     1201 acgctccctg caaaggttct agataatcgt aaacctatct ggtggttgag taacctgtcg
     1261 ctaataaagt gaacgttgcc gaactgtcac ggaagggttt gcgcggacac ccctcccgcg
     1321 agcaggcgcc gaacgcggag accaattcgg cgtgaggtga gggccttgaa acataaacgc
     1381 gggtggacgg cgtgatccgg cggctgcggt tggcttcggg tttggtcatg ttggcttacg
     1441 tgaccaccca cttcgtcaac cacagcctgg gcctgatctc ggtccaggcc atggatcgcg
     1501 cgctcgtaga gatctaccag tactgggcgt ctccgctcgg cggcgtcctc ctctatggcg
     1561 cgttcgccat ccattacagc ctggcgctgt gggcgctctg gctgcgccgt tcgctcaaga
     1621 tgccgttggc ggaggcgacc cagctcgtcc tcggattctc cattcccttt ttcctcatcg
     1681 atcacgttct ccagacgcgc gtcgccgaca ccttctatgg cgccgatgtc ggttactacg
     1741 cgacggtgct gcacaagtat ttcgtcacca atccgctgcg cggcgtcctc cagctcgtcg
     1801 tgctggtgat cgcctgggtg cacgccatga tcgggctgtg gttctggctg cggctcaagc
     1861 cctggtaccg gcgctggcag ccgatcctct acgccttcgc gctgttgctg ccgaccttgg
     1921 cgattctcgg cttcttcgag ggcgggcggc aggtcgcggc cttgtcggag gatccggcct
     1981 gggtcgccca gcaagcgcag gaccatccgc cagcggcgcc ggccaatgcc gcgatcgtcg
     2041 atcagatggt cgtatgggtg cgctacttct tcgtcgcggc gcttcttgcc gtactggcgg
     2101 cgcggtttgc acgctggcgc tggcagcgtc ggcgcggggt catccgcgtg agctatccga
     2161 gcggccgcgt ggtgcagatt gtgcgcggcg tctcggtcct ggaggcgagc cggatggcag
     2221 gcatccccca tgcttcggtg tgcggcggcc ggggccgctg ctccacctgc cgcatcaggg
     2281 tggaaggagc gcaggaggcg ctcgttccgg ccgcgcccga agaggtcaag gtgttacggc
     2341 gcgtgggcgc ggcgcccgac gtgcggcttg cctgtcagct gcgcccgcaa ggcgatttac
     2401 gggtgacgcc gctcctgccg gcgaccgcgc aggcgagcga cggattccat cggcccggct
     2461 atctgcacgg tgccgagcgc gacatcgcga tcctgttcgg cgacttgcga tcctttaccc
     2521 agctctccga aaagaagctg ccctatgatc tggtcttcct cctcaatcgc tactttgccg
     2581 agaccggcca c
//
LOCUS       DATCWM010000561         3600 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_166156, whole genome shotgun sequence.
ACCESSION   DATCWM010000561 DATCWM010000000
VERSION     DATCWM010000561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3600
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166156"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..757)
                     /locus_tag="VIQ50_11040"
     CDS             complement(<1..757)
                     /locus_tag="VIQ50_11040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-5'-phosphate-dependent protein subunit
                     beta"
                     /protein_id="HEY9360959.1"
                     /translation="MTAPFLIQPEILDGERRRAAVECLRAAQVTLPTWSELADPARIP
                     AGVGTSLKSVGPDDPDAKNLWRVHWFNAADRKDRVPLPGHVVLPQALTGVKAPIVVLL
                     GRRFPMIGAHKVLAAYACLVPRLLTGHFDPAHDRAVWPSTGNYCRGGVAISRILRCRG
                     VAVLPAGMSQERFDWLNEWVSDPADIIRTPGTESNVKEIYDKCAELARDERNVIINQF
                     SEFANYLIHYYCTGAAFDRVFAQVKGANPSRRLA"
     gene            complement(754..3150)
                     /gene="cofH"
                     /locus_tag="VIQ50_11045"
     CDS             complement(754..3150)
                     /gene="cofH"
                     /locus_tag="VIQ50_11045"
                     /EC_number="2.5.1.147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-amino-6-(D-ribitylamino)uracil--L-tyrosine
                     4-hydroxyphenyl transferase CofH"
                     /protein_id="HEY9360960.1"
                     /translation="MSRPAIMLDDLDRNLTREQALALVDCSLEELLRAAARRRDAAHG
                     SIVSYSRKVFIPLTKLCRDVCHYCTFAHPPRKNKRAYLSLEDVLAIAHAGLAAGCKEA
                     LFTLGDQPELRYRAAADELARLGHPTTLSYLAQAARAVHDATGLLPHLNPGHLTPADV
                     TALRGVSVSQGLMLESASERLCAPGGPHHGSPDKHPRARLASIRAAGEERVPFTSGIL
                     IGIGETRVERIDSLLALRALHDAYGHIQEIIIQNFRPKAATRMAEWPAPSLEEHLWTI
                     AIARLLFAPSMNIQAPPNLSPNVLPRLIEAGINDWGGVSPVTPDHVNPEAPWPALDAL
                     ARATAAAGKQLVERLAIYPAFARHADRWVDPALRPSLMDRVDADGWPRSDEWCPGARV
                     ALPDDAARLGGPAIAGELPAILARAQAGTVLGEDDIVRLFRCRGEEFSAVCAAADEVR
                     RTANGDVVSYVVTRNINYTNICYFKCGFCAFSKGKLSENLRGRPYDLSREEVARRARE
                     AWARGATEVCMQGGIHPSYSGATYLEICRAVKGAAPDIHIHAFSPLEVHQGAATLGVP
                     VEDFLRSLQAEGLGTLPGTAAEILDDEVRAVLCPDKIATGRWLEVMHAAHRSGLRSTA
                     TIMFGHVDRYEHWARHLLRIRDLQAKTGGFTEFVPLPFVYMEAPIYLKGRSRRGPTFR
                     EAVLMHAVARLALNPLITNIQTSWVKMGPEGVKACLRSGANDLGGTLMDETITRSAGA
                     SHGTEMTPAEMERIIRSLGRLPRQRDTLYRTAAQERYRASFDAGHAADAQPEEAAPAL
                     "
     gene            complement(3157..>3600)
                     /locus_tag="VIQ50_11050"
     CDS             complement(3157..>3600)
                     /locus_tag="VIQ50_11050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013169002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent F420 reductase"
                     /protein_id="HEY9360961.1"
                     /translation="PYESHEAILNEIKPVVAGKIVVDAVVPLVPPKVSVVNLPPDGSA
                     ALSAQRLLAEAVRVQSAFHNVSAAKLAAGGSVDCDVLVFGDDREARATVIELANAAGT
                     RGVDGGPLANSVAAEALTSVLIGINRRYKIVAGIRITGLPVAQPR"
BASE COUNT          604 a         1167 c         1250 g          579 t
ORIGIN      
        1 ccgccagccg acggctcggg tttgcgcctt tgacctgcgc gaacacgcga tcgaaggcgg
       61 cgccggtgca gtaataatgg atcaggtagt tggcgaattc ggaaaactga ttgatgatca
      121 cgttgcgctc gtcacgcgca agctcggcgc acttgtcgta gatttccttg acgttgcttt
      181 ccgttcccgg cgtacggatg atgtcggcgg gatccgagac ccattcgttg agccaatcga
      241 aacgctcctg gctcatgccg gcgggcaaca cggccacgcc gcggcagcgc aggatgcggg
      301 agatggcaac gccgccgcgg cagtagtttc cggtggacgg ccacacggcg cgatcatgcg
      361 ccggatcgaa atgtccggtc agcagacgcg gcaccagaca ggcataggcg gccagcacct
      421 tgtgcgcccc gatcatggga aagcgccgcc cgagcagaac gacgatcggc gccttcacgc
      481 cggtcagcgc ctgcggcagg acgacatggc cgggcagcgg cacgcgatcc ttgcggtcgg
      541 cggcgttgaa ccagtggacg cgccacaaat ttttcgcatc cgggtcgtcc gggccgaccg
      601 atttgaggct cgttcccacg ccggccggga tgcgcgccgg atcggcgagc tcgctccagg
      661 tcggtaaagt cacctgcgcg gcgcgcaggc actccaccgc tgcgcgccgg cgctcgccat
      721 cgaggatttc gggctggatg aggaatggtg ccgtcatagc gccggtgcgg cttcttcagg
      781 ctgcgcgtcg gcggcgtgcc ccgcgtcgaa ggaagcgcgg taacgctcct gcgcagcggt
      841 gcggtaaagc gtgtcgcgct ggcgcggcag gcggccgaga gaacgaatga tgcgctccat
      901 ctcggccggc gtcatttcgg ttccgtgact cgcgcccgcc gagcgggtga tggtttcgtc
      961 catcaacgtg ccgccgagat cgttggcgcc gctgcgcagg cacgctttca cgccttcggg
     1021 gcccatcttc acccaggagg tctgaatgtt ggtgatcagc ggattgagcg cgaggcgcgc
     1081 gacggcgtgc atcagcaccg cctcgcggaa ggtggggccg cgccgggagc ggcctttgag
     1141 atagatcgga gcttccatgt acacgaacgg cagcggcacg aactcggtga agccccctgt
     1201 cttcgcctgc aggtcgcgaa tgcgtagcag gtggcgcgcc caatgctcgt agcggtcgac
     1261 atggccgaac atgatggtgg cggtgctgcg caacccgctg cggtgcgccg catgcatcac
     1321 ctcgagccag cgcccggtgg cgatcttgtc cgggcaaagt acggcgcgca cctcgtcatc
     1381 gaggatttcc gccgcggtgc ccggcagcgt gcccagcccc tccgcttgca gcgagcgcag
     1441 aaaatcctcg accggaacgc cgagcgttgc cgcgccttga tgcacttcga gcggcgaaaa
     1501 cgcgtggatg tggatgtccg gcgcggcgcc tttcacggcg cggcaaattt ccagatacgt
     1561 ggcgccgcta tagcttggat gaatgccgcc ctgcatacag acttcggtgg ccccgcgcgc
     1621 ccacgcctcg cgcgcgcggc gtgcgacctc ctcgcgcgag aggtcgtagg ggcgaccgcg
     1681 cagattttcg ctgagcttgc ctttggagaa ggcgcagaag ccgcatttga agtaacagat
     1741 gttggtgtaa ttgatgttgc gggtcacgac ataggagacg acgtcgccat tcgccgttcg
     1801 gcgcacctcg tcagccgccg cgcacacggc cgagaactcc tcgccgcggc agcgaaacag
     1861 ccgcacgatg tcgtcttcgc ccagcactgt gccggcctgt gctctcgcca aaatggcggg
     1921 gagttctcca gcgatggccg ggccgccgag gcgcgcggca tcgtcgggca gcgcaacgcg
     1981 ggcgccgggg caccattcat cgctgcgcgg ccagccgtcg gcgtcgacgc ggtccatgag
     2041 cgaagggcgc aacgccggat cgacccaacg atcggcgtgg cgcgcgaagg ccggatagat
     2101 cgccagccgt tccaccagtt gcttgccggc cgcggcagtg gcgcgcgcga gcgcatccag
     2161 cgccggccac ggcgcctccg ggttgacgtg atcgggcgtg accggcgaca ccccgcccca
     2221 atcgttgatg cccgcttcga tcaagcgcgg cagaacgttc gggctgaggt tgggcggagc
     2281 ctggatgttc atcgatggcg caaataggag gcgcgcgatc gcgatggtcc acaagtgctc
     2341 ctcgagcgat ggcgccggcc actctgccat gcgggttgcg gctttcggcc ggaaattctg
     2401 gatgatgatt tcctggatat ggccgtaagc gtcgtggagc gcgcgcaggg cgagcagcga
     2461 atcgatccgc tccacgcgcg tttcgccgat gccgatcaag atgcccgagg taaacggcac
     2521 gcgctcttcg ccggcggcgc ggatgctcgc gagccgcgcg cgcggatgct tgtcgggcga
     2581 accgtggtgc gggccgcctg gcgcgcacag ccgctccgac gccgactcga gcatcagccc
     2641 ttgcgataca gacacgccgc gcaaggcggt cacgtcggcc ggcgtcagat ggccggggtt
     2701 gaggtgcggc agcaagccgg tcgcatcgtg caccgcgcgc gcagcctgcg cgagatagga
     2761 caaggtcgtc ggatgtccga gacgagcaag ctcatcggcg gcggctcggt agcgcagctc
     2821 cggctgatcg ccgagcgtga acaaagcttc cttgcagcct gcggccaaac ccgcgtgcgc
     2881 gattgccagc acgtcctcaa gcgacagata cgctcgcttg ttcttgcgcg gcggatgcgc
     2941 gaacgtgcag tagtggcaaa cgtcgcggca cagcttggtc agggggatga agaccttgcg
     3001 cgaatacgag acgatcgagc cgtgcgcggc gtcgcggcgg cgggcggctg cgcgcagcag
     3061 ctcctcgagc gagcagtcca ccagagcgag cgcctgctcg cgggtgagat tgcgatcgag
     3121 atcgtcgagc atgatcgcag gtctactcat ccggcatcac cgcggctgcg ctaccggcaa
     3181 accggtgatg cgaatgccgg cgacgatctt gtagcgccga ttgatgccga tgaggaccga
     3241 ggtcaacgcc tccgcggcga cggaattggc aagcggcccg ccgtcgactc cccgcgttcc
     3301 cgccgcattc gccagctcga tcacggttgc gcgcgcttca cggtcgtcgc cgaacacgag
     3361 cacgtcgcaa tcgacgctgc cgccagcggc gagcttggcc gcgctgacat tgtggaaggc
     3421 ggactggacg cgcacagctt ccgcaagcag ccgctgcgcg ctcaaagcgg cggacccatc
     3481 gggcggaagg ttcaccacgg acaccttcgg gggaacgagt ggcacgacgg cgtcgaccac
     3541 gatcttgccg gcaacgaccg gcttgatctc gttgaggatg gcctcatggc tctcgtaggg
//
LOCUS       DATCWM010000562         3003 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_517193, whole genome shotgun sequence.
ACCESSION   DATCWM010000562 DATCWM010000000
VERSION     DATCWM010000562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3003
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_517193"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1006)
                     /locus_tag="VIQ50_11055"
     CDS             complement(<1..1006)
                     /locus_tag="VIQ50_11055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018265771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY9360962.1"
                     /translation="MAAEQLSTRCCVVGGGPCGLMLGFLLARAGVDTVVLEKHGDFLR
                     DFRGDTIHPSTLTVMAELGLLDEFLKLPHEKAAVIGAFFMGHQYAFADFRYLPIRCKF
                     IAIMPQWDFLNFLADRGRNYPSFHLRMRTEATDLIEDGGRVTGVRATAPDGSLEIRAE
                     LTVGCDGRHSTVRERAGLALDDLGAPMDVLWFRLPKKPSDPDETMGRFDAGRIVVMID
                     RGDYWQCAFLIRKGAIEDTKRAGLPAFRQSIVRLAPVFADRVDELKDWDQIKLLTVAV
                     NRLRRWHRPGLLCIGDAAHAMSPIGGVGVNLAVQDAVAAANLLWPPLNAGTLREEDLD
                     R"
     gene            complement(1084..2220)
                     /locus_tag="VIQ50_11060"
     CDS             complement(1084..2220)
                     /locus_tag="VIQ50_11060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016842608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel/cobalt transporter"
                     /protein_id="HEY9360963.1"
                     /translation="MPVKTVGGRLSVGQLALLVGIIAGLLFAAGLIDSAFAQAGPFGT
                     PRPQMPAPPVGGVLGWIFAKQAEFYRQFSSLIRAAKADGSAAWSLFGLSFLYGIFHAA
                     GPGHGKAVISSYIVANDETWVRGVVLSFASALLQALVAVMVVGIAAALLSATATTMGR
                     AVNVIEIVSYSLIILIGVRLLWVKGRAFVSLLQTLHRPRAVGAAVTPHDHGHGHHDHA
                     HEHVHHDHAHEHHQHDEGHAHHHHHHGEEDSSAWGHAHAPEPEELAGPGGWKRGLSAI
                     LAVGLRPCSGAILVLVFALAQGLFWAGVASTFVMAVGTAITVATIASIAVAARAWAQR
                     VAETRSGYGMLAMRGIEVGAAVVIIAFGALLLTGYVVTERMVGI"
     gene            complement(2211..2867)
                     /locus_tag="VIQ50_11065"
     CDS             complement(2211..2867)
                     /locus_tag="VIQ50_11065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012041629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1007 family protein"
                     /protein_id="HEY9360964.1"
                     /translation="MIGRLGLCGLAACAGLVITTAAARAHPHVWVTVKSELVYAPDGS
                     VTGVRHAWTFDDMFSVFATQGIESKKKGEFTREELAPLAEVNVTSLREYDFFTYAKAN
                     GKKVEFEDPPADYYLDFDPKDTVLTLHFTLPLKAPVKAKDLALEVYDREFFVDFSFAE
                     KEPVKLVGAPAHCKLSIARPQEMSTALTQQLSQLGADQRDPSLTIGTEFANKIIVKCP
                     "
BASE COUNT          581 a          979 c          950 g          493 t
ORIGIN      
        1 cgcgatcgag atcctcctcg cgcagcgtgc cggcattgag cggcggccac agcaagttgg
       61 ctgccgccac cgcatcctgc acggcaagat tgacgccgac gccgccgatc ggggacatcg
      121 cgtgcgcggc gtcgccgatg cagagaagtc ccggccggtg ccagcgccgg agccggttta
      181 ccgcgaccgt caagagcttg atctgatccc aatccttgag ttcgtccacg cgatcggcga
      241 acacgggcgc gagccgcacg atgctctgcc ggaacgccgg caatcctgcg cgtttggtgt
      301 cttcgattgc acctttgcgg atcaaaaacg cgcactgcca gtagtcgccg cgatcgatca
      361 tgaccacgat gcgtccggca tcgaagcggc ccatcgtctc gtcggggtcg ctcggtttct
      421 tcggcaagcg aaaccacaac acgtccatcg gcgcgccgag atcgtcgagg gcgagcccgg
      481 cgcgctcgcg cacagtggag tgccggccgt cgcaacccac cgtcagctcg gcgcggattt
      541 cgagcgagcc atccggcgcc gtggcgcgca cccccgtgac gcggccgccg tcctcgatca
      601 gatcggtggc ctcggtgcgc atgcgcaaat ggaacgatgg ataattacgc ccgcgatcgg
      661 cgaggaagtt gagaaaatcc cactgcggca tgatcgcaat gaacttgcag cggatcggca
      721 gatagcggaa atccgcgaag gcatattggt gccccatgaa gaatgcgccg attacggccg
      781 ctttctcgtg cggcaacttc aggaactcgt cgagcaggcc gagctccgcc atcaccgtca
      841 gcgtcgaagg atgaatggta tcgccgcgaa aatcgcgcag gaaatcgcca tgcttctcga
      901 gcacgaccgt gtcgacgccg gcgcgtgcga gcagaaaccc gagcatgagc ccgcacggtc
      961 cgccgccgac gacgcagcag cgtgtggaga gttgttcggc tgccattcgt ggctctccgt
     1021 gaattgaacg aggcgggtcg ctgaaatgtt ccgggcgtgg ctccgactcg cgacggctgc
     1081 gagctaaatg ccgaccattc gttcggtcac cacgtaaccg gtgagcagca atgcaccgaa
     1141 tgcaatgatg acaacggcgg cgcccacctc gatcccgcgc atcgccagca tgccgtagcc
     1201 ggagcgcgtt tcggcgacgc gctgggccca ggccctggca gcgacggcaa tcgaggcgat
     1261 cgtggcaacg gtaatcgcag ttcccaccgc catgacgaag gtcgaggcga cgcccgccca
     1321 gaacagtccc tgcgccagag cgaaaacaag caccaggatg gcgcccgagc acggccgcag
     1381 ccccacggcg aggatggcgg aaagcccccg cttccagcct cccgggccgg cgagttcctc
     1441 aggctcgggc gcgtgcgcgt gcccccacgc cgaggagtcc tcttctccgt gatgatggtg
     1501 atggtgggcg tgcccttcat cgtgttgatg gtgctcgtgg gcatggtcgt ggtgcacatg
     1561 ctcgtgggca tggtcgtgat gcccgtgacc atggtcatgc ggcgtcacgg ccgcgccgac
     1621 ggcgcgggga cggtggagcg tctgcagaag cgacacaaac gcgcggccct tcacccacag
     1681 caatctcacg ccgatgagaa tgatcagcga gtagcttacg atttcgatta cgttgaccgc
     1741 acggcccatg gtggtcgcag tcgcgctcag cagcgcggcg gcgatcccga cgaccatcac
     1801 cgcgaccagc gcctgcagca gtgccgacgc aaacgacagg accacgccgc gcacccaggt
     1861 ttcatcattc gcgacgatgt aggatgagat caccgccttg ccgtgcccag ggccggcagc
     1921 gtgaaaaata ccgtacagga acgacagccc gaacaggctc caggcggcgc tgccgtcggc
     1981 cttggcggcg cggatcaagc tggagaactg acgatagaat tcggcttgct tggcgaagat
     2041 ccaacccaac acgcccccga cgggcggagc cggcatctgc ggacgaggcg tgccgaatgg
     2101 gccggcctga gcgaatgcgc tatcgatcag gcccgcggca aacagaaggc cggctatgat
     2161 gccgaccagc aaagcgagtt ggccgaccga cagccgccct cccacggttt tcacgggcat
     2221 ttcacgataa ttttgttcgc aaattcggtc ccgatggtca gcgagggatc tcgctgatcg
     2281 gcaccgagct ggctgagttg ctgcgtcagg gcggtgctca tttcctgcgg ccgggcgatc
     2341 gagagcttgc agtgcgcggg cgctcccacc agcttcaccg gttctttctc agcgaaactg
     2401 aagtcgacga agaattcacg gtcgtagacc tcgagcgcca agtccttcgc cttgaccggc
     2461 gccttcaacg gcaacgtgaa gtgaagcgtc agcaccgtgt ccttcgggtc gaaatcgaga
     2521 tagtagtccg ccggaggatc ctcgaactcg accttcttgc cgttcgcctt ggcataggtg
     2581 aagaagtcgt actccctgag cgaggtgaca ttgacttcgg cgagcggcgc caactcctcg
     2641 cgcgtgaatt cgcccttctt cttcgattcg attccttggg tcgcgaacac cgagaacatg
     2701 tcgtcgaagg tccaggcgtg acgaacaccc gtgaccgatc cgtcgggggc atagaccagc
     2761 tcgcttttga ccgtcaccca gacgtgtgga tgtgcgcgcg cggccgcggt cgtgatcacg
     2821 agaccggcac acgccgccaa gccgcataaa cccaaacgac cgatcatcga ttcgctcgcc
     2881 aaacccctcg gcgtgccgct ggccggcacg atatcacgga ctacggcgga atggaggcgt
     2941 caaacgcagt ccgccggtgc tgcaaagtga cgggaaatct acgcccccgc cgcgccgccg
     3001 tcg
//
LOCUS       DATCWM010000563         6327 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_446931, whole genome shotgun sequence.
ACCESSION   DATCWM010000563 DATCWM010000000
VERSION     DATCWM010000563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6327
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_446931"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            136..609
                     /gene="rimI"
                     /locus_tag="VIQ50_11070"
     CDS             136..609
                     /gene="rimI"
                     /locus_tag="VIQ50_11070"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008999 -
                     peptide-alanine-alpha-N-acetyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HEY9360965.1"
                     /translation="MGIITRLFAREVAVSQAGPADARDLAALHAASFHRGWSEDEFDR
                     LLADRHIVAHRATAGAALAGFILSRLVRDDAEILSIAVASARQGRGLARQLLDTNLRR
                     LAALGARSVFLEAEEGNVPARRLYRRAGFREVGRREAYYAPGHGAAALVLRRDLP"
     gene            725..1108
                     /locus_tag="VIQ50_11075"
     CDS             725..1108
                     /locus_tag="VIQ50_11075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018455810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HEY9360966.1"
                     /translation="MRMTEQRRVIARVLAAADDHPDVEELYRRCSAVDDRISISTVYR
                     TVKLFEDAGIIERHEFRDGRARYEQMPDSHHDHLINLRTGEVIEFQSEDIERLQADIA
                     RRLGYRLVDHRLELYAVPLEDKPKR"
     gene            1130..2119
                     /locus_tag="VIQ50_11080"
     CDS             1130..2119
                     /locus_tag="VIQ50_11080"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9360967.1"
                     /translation="MQQSWRILLGFVLGLALASASRAGEDQTARYPDRSIKILVGFAA
                     GGGTDVAARILAQKLSERLGQSVVVENRPGASGMIAAEAVAKSAADGYTLMMGSQTTL
                     AVAPVLYRKFALDAARDFVGVASAGVSPLVLVVHPSVPAQSVGDLITWAKTSPGTINF
                     GSGGLGTTPHMAGELFSIQAGIKMVHVAYRGEAPAINDLLGGQLHLIFANLSAVIGNV
                     KAGSLRALAVTSAQRAVTAPEIPTIAEAALPGFDAATWFALVAPGATPRDIVRRLNTE
                     VTRLVGEPDTRQRFADLGMTIDSGTPESLDGYIKSEIAKWSNVIQQADIRPAE"
     gene            2264..3649
                     /gene="miaB"
                     /locus_tag="VIQ50_11085"
     CDS             2264..3649
                     /gene="miaB"
                     /locus_tag="VIQ50_11085"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HEY9360968.1"
                     /translation="MTRPRKLYIKSFGCQMNVYDSHRMADMLAPEGFAETAHLADADL
                     VILNTCHIREKAAEKVYSELGRVGALKTAAARDGRRLTIAVAGCVAQAEGEEIIRRAP
                     AVDLVFGPQSYHRLPQLLARAEREGAVVDTEFPVEDKFDLLKAPSREAIRARGVSAFV
                     TVQEGCDKFCTFCVVPYTRGAEVSRPVSKILAEVERLTDAGVREFTLIGQNVNAYHGE
                     GPDGTAWTLGRLLERIADLPGVARLRYTTSHPCDMDASLIAAHRDLPSLMPFLHLPVQ
                     SGSDRILKRMNRRHSRAAYLETIARARAAQPKMAFSSDFIVGFPGESEDDFCATLSLV
                     DELGYASAFSFKYSPRPGTPAADAPDQITDDVKSERLHRLQAAIDRQQAAFNARCRGR
                     IFDVLFEKLGRYPGQIVGRSPYLQPVQVMAPRTMIGEIAPVTVTEVASNSLFGAFAEK
                     GVDTKPILMEA"
     gene            3726..4706
                     /locus_tag="VIQ50_11090"
     CDS             3726..4706
                     /locus_tag="VIQ50_11090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HEY9360969.1"
                     /translation="MVLAFDDNRLASLLFGQYGQNLALIERRLGVVAEQRGNHVTLAG
                     SRDGVERSRRVLEGLYEQLRRGDELVTGDVEGAIRLAIAQGSLFDYDAVTARPSFEEI
                     NLRKRAVRARTAAQDAYIRALRRHALVFGTGPAGTGKTWLAVAHAVQLFERKEVDRII
                     LSRPAVEAGERLGFLPGDMREKVDPYLRPIYDALYDMMDARIVERTLQTGEIEIAPLA
                     FMRGRTLSNAVIILDEAQNTTTMQMKMFLTRLGENSRMIVTGDPSQVDLPPGQTSGLA
                     EATRLLRNVEGIGHIVYTAEDVIRHELVARIVEAYDKAAVKPARGCETKE"
     gene            4750..5271
                     /gene="ybeY"
                     /locus_tag="VIQ50_11095"
     CDS             4750..5271
                     /gene="ybeY"
                     /locus_tag="VIQ50_11095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016840392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HEY9360970.1"
                     /translation="MTRKRRARPALRRRASPAVDIVVASPLWTSKRSVKALLRRAIGE
                     AALLTSAAVGELAIVLTDDLAIRALNRDWRCKDRATNVLSFRAAEVRRARGTPHLLGD
                     IVIAYETTEREARAENKPFAHHAAHLAVHGFLHLAGYDHAADDEAAAMERLETAILAR
                     LDVPNPYVARSAI"
     gene            5277..>6327
                     /locus_tag="VIQ50_11100"
     CDS             5277..>6327
                     /locus_tag="VIQ50_11100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HEY9360971.1"
                     /translation="MPDSDPPSSNEPSTTRNLPVPVARPSQSAPESGDNWLTRALRTI
                     FRWKSSTLRADLRDVLEDGAGESGFSPIERAMLKNILALRERRVADVMVPRADIIGVQ
                     RDIALGELMKVFESAGHSRLVVYEETLDDAIGMVHIRDLVAFMTERASQSGTTNRRRK
                     KPLPAGLDLKAVDLSMPLSTAKIVREILYAPPSMPVLDLLAKMQTTRIHLALVVDEYG
                     GADGVVSIEDIVEQIVGEIADEHDEDTAPGVVGQSDGSFLADARANLDDVTAIVGNEF
                     DVGDVAKEVDTLAGYVATRIGRVPVRGELVPGPGPFELEILDADPRRVKKLKIYRGLD
                     RQNGSRPAVRRQLGSA"
BASE COUNT         1147 a         2010 c         2043 g         1127 t
ORIGIN      
        1 gcgcggcgct cccgatatcg agtggattgc ccggctcggc gccgctgcga cggacggcta
       61 cagtccgcct aagccgctct acctgcgcga gcccgacgcg cagccgcagg acgccgcgcg
      121 tctaccccgc cgatgatggg catcattacg cgtctgttcg cgcgcgaagt cgcggtctcg
      181 caagccggcc cagcggacgc ccgcgatttg gcggcgctgc atgccgcgtc gttccatcgc
      241 ggatggagcg aggacgaatt cgatcgcttg ctcgcagatc gtcacatcgt tgcccatcgc
      301 gccacagcgg gagccgctct cgccggattc atcctgtcac ggctcgtgag agacgacgcg
      361 gagatcctgt cgatcgctgt cgcctccgca cggcagggcc gaggattggc gcggcagctg
      421 ctcgatacca acctgcgtcg actggcggcg ctcggggcgc gttcggtttt tctcgaggcg
      481 gaggagggca acgtaccggc acgccggctt taccgccgcg cgggcttccg ggaggtcgga
      541 cgccgagaag cttattatgc gccagggcac ggcgccgcag cccttgttct gcgccgcgat
      601 ctcccgtgag tgccctggaa cccaatggat tccacggttc cgccgtgata ttgcgatcgg
      661 acggagaagc gccgtgaacg cgccgaagcc cagagacatc gaagctctat gcagcgccaa
      721 gggcatgcgc atgaccgagc agcgccgcgt gatcgcacgc gtgctggcgg cagccgatga
      781 ccacccggat gtcgaggagc tttaccggcg ctgctccgcg gttgacgacc gcatctccat
      841 ctccaccgtt taccgcaccg tgaagctgtt cgaggatgca ggtatcatcg agcggcatga
      901 gttccgcgac gggcgggcgc gctacgagca gatgcccgac agccatcacg accatctcat
      961 caatttgcgt acgggcgagg tgatcgagtt tcaatcggaa gatatcgaac gcctgcaggc
     1021 cgacatcgcg cggcgtctcg gctaccgact ggtcgaccat cgtctcgaac tctatgccgt
     1081 cccgctcgag gacaagccga aacgctgagc ttgcgacgag gacacagcag tgcagcaatc
     1141 gtggcgcatc ttgctgggct tcgtgctcgg cctcgctctc gcctcggcgt cgcgcgcggg
     1201 cgaggatcag acggcacgtt atcccgaccg gtcgatcaaa attttggtgg gctttgccgc
     1261 gggcggcggc accgacgtcg ccgcgagaat tctggcgcag aagttgagcg agaggttggg
     1321 tcaatcggtc gtggtcgaga accgtcccgg cgcaagcggg atgatcgccg cggaagcggt
     1381 ggcgaaatcg gccgccgacg gatatacgct gatgatgggg agtcagacca ctttggccgt
     1441 cgccccagtg ctgtatcgta agttcgcgct cgatgcggct agggattttg tcggggtggc
     1501 gagcgccggc gtctcgccgc tcgtgctcgt cgttcatccg tcagtgcccg cccaatcggt
     1561 cggggacctc atcacttggg cgaagacgag cccgggcacg atcaatttcg gctccggcgg
     1621 actcggcacc acgccgcaca tggcaggtga gcttttttcg atccaggccg gcatcaagat
     1681 ggtgcacgtg gcctatcgcg gagaggcgcc ggccattaac gatctcctcg gtggtcagtt
     1741 gcatctcatc ttcgcaaacc tctccgctgt cattggcaac gtgaaggcag ggtcgctgcg
     1801 cgcgctcgcc gtcacaagcg cgcaacgcgc cgtcactgcg cccgagattc ccaccatcgc
     1861 ggaggccgcg ctgcccggct tcgatgcggc aacctggttc gcgctggtcg caccgggggc
     1921 gactccacgc gacatcgttc gccggctgaa cacggaggtg acgcggcttg tgggagagcc
     1981 ggatacgcgg caacgctttg ccgatctcgg aatgacgatc gattccggca cgcccgagtc
     2041 actcgacggc tacatcaaat ccgaaatcgc caaatggtcc aacgtgatcc agcaggctga
     2101 catccgccct gcggagtagc aaacggatca atccacaccc atttcctttt ggcaccgggg
     2161 cgggtaaaaa gcacagacgt cgaccgaccg cgccgcggct caggattcgt aggcagatca
     2221 aagagttgaa gctttaccgg gtgcgcagaa cgacccgacc ggcatgaccc gaccgcgcaa
     2281 gctctacatc aaatccttcg gctgccagat gaacgtctac gattcccatc gtatggcgga
     2341 catgctcgcg cccgagggct ttgccgagac ggcccacctc gcggacgcgg accttgtcat
     2401 cctcaatacc tgccacattc gcgagaaggc ggcagaaaag gtttattccg aactcgggcg
     2461 cgtgggcgca ctcaagaccg ccgcggcgcg cgacggacgc cgcttgacca tcgctgtcgc
     2521 cggctgtgtt gctcaggccg aaggagagga gatcatccgt cgggcacccg ccgtcgatct
     2581 cgtcttcggg ccgcagagct accatcgtct gccgcaactg ctggcccgag ccgagcgtga
     2641 gggcgcggtg gttgataccg aatttccggt cgaggacaag ttcgacctgc tcaaagcgcc
     2701 gagccgcgag gcgatacgcg cgcgcggtgt cagtgcgttt gtcaccgtgc aggaaggctg
     2761 cgacaagttc tgtacgttct gtgtcgtgcc atatacgcgc ggcgccgagg tctcgcggcc
     2821 ggtgagcaaa attcttgccg aggtcgagcg gctgaccgac gccggggtgc gcgaattcac
     2881 gctcatcggc caaaacgtca atgcttatca cggcgaaggg cccgacggca cagcatggac
     2941 gctcggacgc ttgctggagc gcatcgccga tctacccggg gtcgcccggc tgcgctacac
     3001 cacgagccat ccctgcgaca tggatgcgag cctcatcgcc gcgcatcgcg acctgcccag
     3061 cctaatgccg tttctgcact tgcccgtgca gtccggttcc gaccgcatcc tcaaacgcat
     3121 gaatcgccgc cactcccgcg ccgcttatct cgagacgatt gcgcgcgcgc gcgccgccca
     3181 accaaaaatg gcgttctcgt ccgacttcat cgtcggcttc cccggcgaga gcgaggacga
     3241 tttttgcgcg acgctgtcgc tggtggacga actgggctac gccagcgctt tctctttcaa
     3301 atactcgcct cggcccggaa cgccggccgc ggacgcacct gaccagatta ccgacgatgt
     3361 caaatccgag cggctccacc ggttgcaggc cgcgatcgat cgacagcagg ctgcgttcaa
     3421 tgcgcggtgc cgtggccgca tctttgatgt cctgttcgaa aagctgggac gctatcctgg
     3481 tcagatcgtc gggcgctccc catatctcca gccggttcag gtcatggcgc cccggacaat
     3541 gatcggcgag atcgcaccgg tgacggtcac cgaggtcgcg agtaacagct tgttcggcgc
     3601 gtttgcggaa aagggcgtgg ataccaagcc catattgatg gaggcctgac ccgttgcgct
     3661 cctctcaatc ggatagcgaa acattcgtac cttcgtccgg cgccggagat ggtgcagtaa
     3721 ctcagatcgt gctcgccttc gacgacaacc ggctcgcctc tctgttgttt ggccaatacg
     3781 gacaaaacct ggcgctgatc gagcgcaggc tcggcgtggt cgcggagcag cgcggcaatc
     3841 acgtgaccct agccggctcg cgcgacggcg tagagcgatc gcggcgggta ctcgaaggtc
     3901 tttatgagca gctcaggcgc ggcgacgagc tggtcaccgg cgacgtcgaa ggcgcaatcc
     3961 gcttggcaat cgcacaaggc tcgctgttcg actatgacgc cgtcaccgcg cggccgagct
     4021 tcgaggagat caacctgcgt aagcgcgccg tgcgcgcgcg cacggcggct caagacgcct
     4081 atatccgtgc gttgcgccga catgcgctgg ttttcggcac cgggccggcg ggcacgggta
     4141 aaacttggct cgcggtcgcc catgcggtgc agttgttcga gcgcaaggag gttgatcgga
     4201 tcattctgtc gcgtccggcg gtcgaggccg gcgagcggct gggatttctt cccggcgata
     4261 tgcgagagaa ggtcgatccg tatctgcgtc cgatctatga cgcgctctac gacatgatgg
     4321 atgcgcggat cgtcgagcgc acgctgcaga cgggggaaat cgagatcgca ccgctcgctt
     4381 tcatgcgcgg ccgaactctt tcgaatgccg tcatcatcct cgacgaggcg cagaatacca
     4441 caacgatgca gatgaagatg ttcctcactc gattgggcga gaacagccgc atgatcgtca
     4501 ccggtgaccc gagtcaggtt gatttgccgc cgggacagac gtccggcctc gcggaagcga
     4561 cgcggcttct gaggaacgtc gagggaattg gtcacatcgt ctacacggcc gaggacgtca
     4621 tccggcacga actggtggcg cgcatcgtcg aggcctatga caaggcagcg gtcaagcccg
     4681 cgcgggggtg cgagaccaag gaatgaagtt tctgggtttc gtcaagccta cccgcgagga
     4741 aggaacacga tgactcgcaa acggcgcgcg cgaccggcgc tgcggcggcg ggcatcgccg
     4801 gcggtcgaca tcgtggtcgc atctccgctc tggacgagta aacgtagcgt taaggcactg
     4861 cttcgccgcg cgatcggcga ggcggcattg ctgacgtcgg cagccgttgg cgagcttgcg
     4921 atcgtgctga cggacgattt ggcgatccgg gcgctcaatc gcgattggcg ttgcaaggac
     4981 agagcgacca atgtgctgtc ttttcgcgcc gcggaagtga ggcgggctcg tggaacaccc
     5041 cacctgctcg gtgacattgt gatcgcctac gagaccacgg aacgtgaagc gcgcgccgag
     5101 aataaaccct ttgcgcatca tgccgcccat cttgcggtgc atggattcct gcatctcgcc
     5161 ggctacgatc acgcggcgga cgacgaggcg gccgcgatgg agagacttga aaccgcgatc
     5221 cttgcccgcc tcgacgttcc caatccctac gttgcgcgca gcgccatcta gtctccatgc
     5281 ctgactcaga cccgcccagt tcgaacgaac cgagcacgac gcgcaatctg cccgtgccgg
     5341 tggcacgtcc gagtcaaagc gcgcccgaga gcggcgacaa ttggctcacg cgggcgctgc
     5401 gaacgatctt ccgctggaaa tcgagcacgt tgcgcgccga tctgcgggac gtgctcgagg
     5461 atggcgccgg cgagagcggg ttctcgccga tcgagcgcgc catgctcaag aacatcctcg
     5521 cgctgcgcga gcgccgcgtc gcggatgtga tggtcccgcg cgccgatatc atcggcgtgc
     5581 agcgggacat cgcgctcggc gaactcatga aggtgttcga gagtgctggc cattcccggc
     5641 tcgtggtcta cgaggaaact ctcgacgacg cgatcggcat ggtccacatt cgcgacctcg
     5701 ttgcgttcat gacggaacgc gcgagccaga gcggaaccac caatcggcgg cgcaaaaagc
     5761 cgcttcccgc cggcctcgat ctcaaagcgg tcgatctgtc gatgccactg tcgacagcaa
     5821 aaatcgtgcg cgagattctc tacgcgccgc cctccatgcc ggtccttgat ctgttggcca
     5881 agatgcagac gacccgtatc catcttgccc tcgttgtcga cgaatacggc ggcgccgatg
     5941 gcgtcgtatc gattgaagat atcgtcgagc agatcgtggg cgagatcgcc gacgagcacg
     6001 acgaggacac ggcgccgggc gtggtagggc aatccgatgg ttcgttcttg gcggatgctc
     6061 gcgccaacct cgatgacgtg accgcgatcg tgggtaacga attcgatgtc ggtgacgtcg
     6121 ccaaggaggt ggacacgctt gccgggtatg ttgcgacgcg gatcggccga gtgccggtgc
     6181 gcggcgagct cgtacctggc ccagggcctt ttgagctcga aattctcgat gccgatccgc
     6241 ggcgagtgaa gaagctcaag atttaccgtg ggctcgaccg gcagaacggc agccggcctg
     6301 cagtgcggcg gcaactcggg tccgcgc
//
LOCUS       DATCWM010000564         4745 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_506290, whole genome shotgun sequence.
ACCESSION   DATCWM010000564 DATCWM010000000
VERSION     DATCWM010000564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4745
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_506290"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1532
                     /gene="selD"
                     /locus_tag="VIQ50_11105"
     CDS             <1..1532
                     /gene="selD"
                     /locus_tag="VIQ50_11105"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004756 - selenide, water dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0001887 - selenium compound metabolic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HEY9360972.1"
                     /translation="LRVDETLRVIGHDDVFAAGDTIAFSGRELPKSGVYAVRAGPALA
                     ENIRRTLTGRSLRRFRPQREALYLVSTGERHAVGTRNGLVVEGAWAWRWKDWIDRRFM
                     RKFNELPEMTTAPAALPPLADRDALKEISAIAMRCGGCGAKVGASVLSRALAGIEPAA
                     RTDVVVGLDAPDDAALVDVGGKQLSLQTVDYFRAIVDDPYTLGKIAANHALGDVYAMG
                     GEPQTALAIATVPFGLESKIEADLTAMMAGANEVLREAGCALVGGHTSEGAELALGFA
                     VNGLVPAAAALRKGGLKPGDGLILTKPLGTGTLLAADMRGKAKARWVMAAIAHMVQSN
                     RKAAEILRRHGVHAATDVTGFGLLGHLIEMVRASEVDATLAIERVPLLEGARETVALG
                     IFSSLQPQNVRLRRAIRDLAAAARHPLYPLLFDPQTSGGLLAAVPLAQAARCVTALRA
                     GGYAGADLIGFVAARSAALEPVTVDPTGEQLAAALAGLHPPRPRAHALQRVSDTEKSA
                     L"
     gene            complement(1678..2835)
                     /locus_tag="VIQ50_11110"
     CDS             complement(1678..2835)
                     /locus_tag="VIQ50_11110"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HEY9360973.1"
                     /translation="MKRSTGRILTTHVGSLPRPADLLDIVQAREQGKPVDEKAHAARL
                     RTAVAEIVRKQIDLGVDIVDDGEFGKPSFVSYVNERLGGFEVDKDMPRQSPWADSREA
                     KSFPEFYGDGHVAVRRNHMVCIAPITYRGMAQLQTDIDNLKAALNGAGPEEVFMPAIS
                     PTSAADWQRNAYYKTEEEYLFAIADALREEYEAIVNGGFLLQVDDPHLVTYWIKQSDL
                     TLEQFRKWAQLRVEALNHALRNIPPERVRHHTCYGINMGPRVHDLELKHIVDLILKIR
                     AGAYSFEAANPRHEHEWKVWENAKLPSGKSLIPGVISHSTVLVEHPELVAERICRYAK
                     VVGRGNVIAGSDCGFATFAGSKEVHPSIVWAKFKSLVDGARLASQQLWGGR"
     gene            complement(2878..3936)
                     /locus_tag="VIQ50_11115"
     CDS             complement(2878..3936)
                     /locus_tag="VIQ50_11115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360974.1"
                     /translation="MFARWSAATVLATVLAVAPAHAESVANFYKRRQVDLIVGSGPGG
                     GYDIYARLLARHLGKFIPGHPPIIVQNMPGGGSLRAVNFLYNLAPKDGTAIGTFTRNM
                     PLIGLLGGNANVQFDPRKLTWLGSASSFVNDAYILIVRKDAPVKSIDEARRADLPGLV
                     LGATADGGTGNDVPIILRDTIGLHVKQVVGYSDSASVFLAIERGEIHGRTVDLSTVKS
                     VKPEWLNPDSDFRVLVQFARATRHSDLPDVPTARELAKNEAARALIELAELPYALSRP
                     FAAPPGVPAARAKALQRAFLAVQSDPQYLEDAAKISVDVSPIGADEVLREIDRIAVAP
                     PELLDYARRLLAEPRGGG"
     gene            complement(4071..>4745)
                     /locus_tag="VIQ50_11120"
     CDS             complement(4071..>4745)
                     /locus_tag="VIQ50_11120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007759303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9360975.1"
                     /translation="KEAERVLSNGANAIQLHTNVDGAPIDQDCFLPIYEIIEKSGKPI
                     LLHPIRTREMADYRNETVSKYEICSVIGWPFETGAALARLVFSGIMDRFPNLKVIAHH
                     LGGIIPYFEGRVAHSWDQLGARTSDEDYSLLLKKLKKRPFDYFKDFYGDTALAGARAP
                     TICGLSFFGPDRVLFASDCPFDKEKGRGYIRSTIAVMESLGLPEDDMKKICHGNAETM
                     FGLRKA"
BASE COUNT          815 a         1555 c         1520 g          855 t
ORIGIN      
        1 ttctccgggt tgacgagacg ctacgagtga tcggccatga tgacgtcttt gccgccggcg
       61 acaccatcgc gttttccggc cgcgagttgc ccaagtcggg cgtctacgcc gtgcgcgccg
      121 ggccggcgct tgccgaaaac atccgccgca cgctgaccgg ccgatccttg cggcggttcc
      181 ggccgcagcg ggaggcgctc tatctggtct cgaccggaga acgccacgcg gtcggcacgc
      241 gcaacggcct cgtggtcgag ggcgcgtggg catggcgctg gaaggactgg atcgatcgcc
      301 ggttcatgcg caagttcaac gagctgccgg agatgacgac agcccccgcg gcgctgccgc
      361 cattggccga ccgcgacgcg ctcaaggaaa tttccgccat tgccatgcgc tgcggcggct
      421 gcggcgccaa agtcggcgcc agcgtgctct cgcgcgcgct tgcgggcatc gagcctgccg
      481 cgcggaccga cgtggtcgtg gggctcgatg cgcccgacga cgcagcgctg gtcgacgtcg
      541 gcggcaagca gctctcgctg cagacagtcg attatttccg cgccatcgtc gatgacccct
      601 acacgctggg gaaaatcgcg gccaaccacg cgctcggcga cgtctacgcc atgggcgggg
      661 agccgcagac ggcgctggcg atcgccaccg tgcctttcgg gctcgaaagt aagatcgaag
      721 ccgatctcac tgcgatgatg gccggtgcaa acgaggtgct gcgcgaggcc ggctgtgcgc
      781 tggtcggcgg acataccagc gaaggcgccg aactcgcgct cggctttgcg gtcaatgggc
      841 tagttccggc ggcggccgcg ttgcgcaagg gcgggctaaa gccgggagac ggcctcatcc
      901 tgaccaagcc attgggcacc ggcaccctgc ttgcagccga catgcgcggc aaggccaagg
      961 cccgttgggt gatggcggcg atcgcgcaca tggttcagtc gaaccgtaag gccgcggaaa
     1021 tcctgcgacg gcacggcgtg catgctgcaa ccgacgtcac cgggtttggt ctgctcggcc
     1081 atctcatcga gatggtgcgc gcctccgagg tcgacgcgac gctcgcgatc gagcgcgtgc
     1141 cgctgctcga aggcgcgcgg gagacggtgg cgctcggcat tttctcgtcg ttgcagccgc
     1201 agaatgtgcg gctgcgacgc gccatccgag acctcgccgc ggccgcgcgg cacccgctct
     1261 atccgctgct gttcgatccg caaacctcgg gcggactgct ggcggcggtt ccgctcgccc
     1321 aagccgcgcg ttgcgtcaca gcgctgcggg cgggcggata tgccggcgcc gatctcatcg
     1381 gctttgtggc cgcgcgcagc gccgcgctcg agcctgtgac cgtagaccca actggagaac
     1441 agctcgccgc cgcgttggct ggactacacc ctccccgtcc gcgagcgcac gcactgcaaa
     1501 gggtctctga taccgaaaaa tctgctcttt gatgctgcag ttcccgccaa actcgatcgc
     1561 aagcctttgg tggcacctcc aaacggatct gcctcgcctg gccgctgcgc ggcgactgct
     1621 tgatctattc gtttattcgt acgcagtcgg gcttctattc gatccagccc gaccgcctca
     1681 ccgcccgccc cacagctgct gactcgcgag gcgcgcgccg tcgacgagcg acttgaactt
     1741 ggcccacacg atgctcgggt gcacctcctt cgagccggcg aaggtggcaa agccgcaatc
     1801 ggagccagca atgacgttcc cgcgcccgac caccttggca tagcggcaga tgcgctcggc
     1861 cacgagctcg gggtgttcga ccaaaacagt cgagtggctg atcaccccgg gaatgagcga
     1921 cttgcctgat ggcagcttcg cgttctccca gactttccat tcgtgctcgt gccgcggatt
     1981 cgccgcctcg aacgaatagg cgccggcacg gatcttcaga atgaggtcga cgatgtgctt
     2041 gagttcaaga tcgtgcaccc gcggccccat attgatgccg tagcaggtgt gatgccgaac
     2101 tctttccggc ggaatattgc gcagcgcatg attgagcgcc tcgacccgaa gctgcgccca
     2161 cttccggaac tgctccaggg tgagatcgga ctgtttgatc cagtaggtga cgagatgggg
     2221 atcatcgacc tgcagcagaa agcccccgtt cacgatcgcc tcgtactcct cgcgcagcgc
     2281 gtcggcgatg gcgaataggt attcttcctc ggttttgtag taggcattgc gctgccaatc
     2341 cgccgcgctg gtcggcgaga tcgccggcat gaagacttcc tcggggccag caccgtttag
     2401 cgccgccttg aggttgtcga tgtcggtctg caattgcgcc atgccgcggt aggtgattgg
     2461 cgcgatgcaa accatatggt tccgccgcac ggccacgtgt ccgtccccgt agaactcagg
     2521 aaacgatttt gcttcgcgcg agtccgccca cgggctctgc cgcggcatgt ccttgtcaac
     2581 ctcgaagcca cccaggcgtt cattgacgta ggagacgaag ctcggcttgc cgaactcgcc
     2641 gtcgtcgacg atgtcgacgc cgagatcgat ctgcttgcgc acgatctcgg cgaccgcggt
     2701 gcgcaaccgc gccgcgtgcg ccttctcgtc gacaggtttg ccctgctctc tggcctgcac
     2761 gatgtcgagc agatcggcgg gacgcggcag gctgccgaca tgggtggtga gaattctgcc
     2821 tgtgcttcgc ttcatagctc ctcccctgct gccgatcgcg caggtcggga tcgcgcctca
     2881 gccgccgcct cggggctcgg cgaggagcct gcgcgcatag tcaagaagct ccggcggagc
     2941 gacggcgatg cgatcgatct cgcgcagcac ctcatcggct ccgatcggac tcacgtcgac
     3001 gctgatcttg gcggcgtcct ccaggtattg cggatcgctc tgcaccgcca gaaacgcgcg
     3061 ctgcagcgcc ttggcgcgcg ccgccggcac ccccggcggt gccgcaaacg gccgggacag
     3121 cgcgtaggga agctcggcaa gctcgatcag cgcgcgcgcc gcctcgtttt ttgccagctc
     3181 gcgcgcggtc ggcacgtcag gcaaatccga atgccgggtc gcgcgcgcga actggacgag
     3241 cacgcgaaaa tcgctgtcgg gattgagcca ctcgggcttc accgacttca cggtcgacag
     3301 atcgacggtc cgcccatgga tctcgccacg ctcgatcgcg agaaaaacgg aggcactatc
     3361 cgagtagccc acgacctgct tgacatgcag accgatcgtg tcccgcagga tgatgggaac
     3421 atcgttaccc gtccctccgt cggcggtggc gccgagtacg agccctggaa gatccgcgcg
     3481 gcgtgcctca tcgatcgatt tcaccggcgc gtccttgcgc acgatgagaa tataggcgtc
     3541 gttgacgaag ctcgatgcgg aaccgagcca agtcagcttg cgcggatcga attggacgtt
     3601 tgcattgccg ccgaggagac cgatgagcgg catgttgcgg gtaaacgtgc cgatcgcggt
     3661 gccatccttc ggggcgaggt tgtagaggaa attgacggct cgcagactgc cgccgcctgg
     3721 catgttctgc acgatgatag gcggatggcc gggaatgaac ttgccgaggt ggcgcgcaag
     3781 cagccgcgca tagatgtcgt agccgccgcc cggcccggag ccgacaatga gatcgacctg
     3841 ccttcgcttg tagaagttcg caaccgattc cgcatgcgcg ggagccaccg ccaacaccgt
     3901 agcgagcacc gtcgccgcac tccagcgcgc gaacattttt cctccgcttt cctcaccaag
     3961 ctaaccgcgc ccaccggcgc attcaatgct tggtgccgga tctggttccc gcaacgagct
     4021 cgcggaacga gagcgccgcg aggcgcgccc gctgggtggc ccaggatcga tcaagccttc
     4081 cgcagcccaa acatcgtttc ggcgttgcca tggcagatct ttttcatgtc gtcctcggga
     4141 agtccgagcg actccataac cgcgatcgta gagcggatgt agcccctgcc cttctccttg
     4201 tcgaacggac aatcggaggc aaatagcacg cgatcgggcc cgaagaacga caatccgcaa
     4261 atcgtcggtg cgcgggcacc ggcgagcgcg gtgtcgccgt aaaagtcctt gaagtagtcg
     4321 aacggccgct tcttcagttt cttcagcagg agcgaataat cctcgtccga cgtgcgcgcc
     4381 cccaactgat cccagctatg ggcaacgcgg ccttcgaaat agggaatgat gccgccgagg
     4441 tggtgcgcga tcaccttcag attggggaag cggtccatga tcccggaaaa gacgagtcgc
     4501 gccagtgcgg cgccggtctc gaacggccag ccgatcacgc tgcagatctc gtatttcgac
     4561 acggtctcgt tgcggtagtc cgccatctcc cgcgtgcgga tcgggtgcag caggatcggc
     4621 ttgcccgact tctcgatgat ctcgtagatc ggcagaaagc aatcctggtc gatcggggcg
     4681 ccatcgacat tggtgtgaag ctggatcgcg ttggcgccgt tcgacaatac gcgctcggct
     4741 tcctt
//
LOCUS       DATCWM010000565         5837 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_9462, whole genome shotgun sequence.
ACCESSION   DATCWM010000565 DATCWM010000000
VERSION     DATCWM010000565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5837)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5837)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5837
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9462"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1177)
                     /gene="hflX"
                     /locus_tag="VIQ50_11125"
     CDS             complement(<1..1177)
                     /gene="hflX"
                     /locus_tag="VIQ50_11125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HEY9360976.1"
                     /translation="MEPRRFDSRSDRLSPPEGGETGRALVIEPDLRSRAPAAAGARGK
                     AVLRSPEARLEEAVGLARAIDLNVVASGIAPLGGIRPATFIGKGKVEEIAGLVKSDEV
                     GIVVMDCALSPVQQRNLEKSWGAKVVDRTGLILEIFGRRARTREGALQVELAHLTYQK
                     SRLVRSWTHLERQRGGFGFLGGPGETQIEADRRMIEGRIGRIEVELEKVKRTRKLHRD
                     SRKRVPYPIAALVGYTNAGKSTLFNRLSRASVLSADMLFATLDPTLRAVELPSGLRVI
                     LSDTVGFISDLPTMLVAAFRATLEEVIEADLILHVRDVSHEDADAQSLDVEDVLSQLG
                     IAGRDGGRLLEVWNKIDRLEGDARLRLRNHAERQEAPRRPVLVSAHSGEGLDRLAAEI
                     "
     gene            complement(1178..1438)
                     /gene="hfq"
                     /locus_tag="VIQ50_11130"
     CDS             complement(1178..1438)
                     /gene="hfq"
                     /locus_tag="VIQ50_11130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008385166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HEY9360977.1"
                     /translation="MAADRSQNLQDTFLNHVRKNKTPLTIFLVNGVKLQGVVTWFDNF
                     CVLLRRDGHSQLVYKHAISTIMPGHPIQLFEGAEEAPAAEKV"
     gene            complement(1624..2481)
                     /locus_tag="VIQ50_11135"
     CDS             complement(1624..2481)
                     /locus_tag="VIQ50_11135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino-acid transaminase"
                     /protein_id="HEY9360978.1"
                     /translation="MSRIAYVNGRYLPQRAATVHVEDRGYQFSDGVYEVCEVRGGSII
                     DQRRHLVRLKRSLDELRIDMPMSEAALATVMRECVRRNRVRDGIIYLQITRGVARRDH
                     AFPPAGTRPSIVITAHGLDVVANERIAADGVAVITVPDNRWQRVDIKSISLLPNVLAK
                     QTARERGAKEAWFVDGDGNITEGSSSNAWIVTKGGKVVTRPADHGILRGITRTVLIEV
                     ISAQGLQLEERPFTVEEAYGAREAFLTSASQIVMPVVRIDERAIGNGAPGSIATALRA
                     EFHRHAEWT"
     gene            complement(2488..3852)
                     /locus_tag="VIQ50_11140"
     CDS             complement(2488..3852)
                     /locus_tag="VIQ50_11140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEY9360979.1"
                     /translation="MADDILIVDDEADIRELVSGILQDEGYITRSARDSDDALAHVAS
                     RRPNLVFLDIWLQGSRLDGLQLLDALKAQHPELPIVMISGHGNIETAVAAIKQGAYDF
                     IEKPFKADRLVLVTQRALETSRLKREVKALKQLAPSTLVGKSSSMNQLRQTIEKISPT
                     NSRILIVGPAGAGKELTARAIHGQSARTNGPFIVINAAAMMPERMEVELFGVEQPTNG
                     GGRKVGALEEAHGGTLFIDEIADMPRETQNKILRVLVEQTFQRVSGTHKVQVDVRIIS
                     STGRNIEAEIAAGKFREDLYHRLSVVPIRVPPLAERREDIPSLIEYFMHQISQATGLP
                     KRLIGDDAMAVLQSHDWPGNVRQLRNNVERLMILAGGDPEAVINADMLPPDVGSMVPS
                     MPGGDGGEHLMGLPLRDAREVFEREYLVAQISRFGGNISRTAEFVGMERSALHRKLKA
                     LGID"
     gene            complement(3856..>5837)
                     /locus_tag="VIQ50_11145"
     CDS             complement(3856..>5837)
                     /locus_tag="VIQ50_11145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HEY9360980.1"
                     /translation="HVRIVALFSIIAAVPAIIVAVVASVTLDRGLDRLFSQQTRSLIE
                     NSLIVSDAYVREHVQFVRADSIAIAIELARAKPLFDQSREQFHQFLAVQASIRGLPAV
                     MLIDKDVNVIDQVDSRTSEAFVKPSPDVLAAVNDTEPQVAMFPDDNYIAAIIKLRGYD
                     DTYLYVARLLDPRVLAQLRATQASVAQYADLSARRIGIQIAFALMYTVIALIVLLSAV
                     WIGLNFANYLVAPIRRLIGAAQVVSTGNLYVQVPTRRSEGDLAQLGETFNKMTQELRT
                     QRDDIVRARDLIDSRRRFTEAVLAGASAGVIGVDADSCISIMNRSAEQLIGRIEADVL
                     GQPLAEVVPELADMLAAARSGTQRLVQGQVTINRNGRERNLSVRVTSEQSGAAEGGYV
                     VTLDDITELVAAQRTSAWADVARRIAHEIKNPLTPIQLSAERLRRKYGSVIKEDGGVF
                     QQCTDTIVRQVDDIKRMVDEFSRFARMPKPVMTAEDIADTVRQVVFLHRVGNADLDID
                     LEIAEDPMPAKFDRRLISQALTNIIKNSTEAIAAVPPAELGRGRIRIWAGREGGDVVI
                     DVIDNGIGLPKENRSRLLEPYVTTREKGTGLGLAIVGRILEEHGGRIELGDAADKIPG
                     QRGAWMRLRFAEEAASSKEADTAPQPQTPQLATNA"
BASE COUNT          976 a         1893 c         1890 g         1078 t
ORIGIN      
        1 cgatctcggc cgcgagccgg tcaagcccct ccccgctgtg cgcggagacc agcactggac
       61 ggcgcggcgc ctcctgacgt tcggcgtgat tgcgcaagcg aaggcgcgcg tcaccctcga
      121 gccggtcgat cttgttccaa acctccagca accggccacc gtcgcgtccg gcgatgccga
      181 gttgcgacag cacgtcctcg acgtcgagcg actgtgcgtc ggcatcctcg tgcgagacgt
      241 cgcgcacgtg caagatcagg tcggcttcga tgacctcttc cagcgtcgcg cgaaacgccg
      301 ccaccagcat ggtcggcaaa tccgagatga agccgacggt atcggacagg atcacgcgca
      361 atccgctcgg cagctcgacc gcgcgcaatg tcgggtcgag ggtagcaaac agcatgtcgg
      421 cggagagtac gctggcccgg ctcaggcgat tgaacagcgt cgatttgcct gcattggtat
      481 agcccacgag cgccgcgatc ggatacggca cgcgcttgcg gctgtcgcga tggagcttgc
      541 gcgtgcgctt gaccttctcg agctccacct cgatgcggcc gatgcgtccc tcgatcatgc
      601 gccgatcggc ttcgatctgg gtttcgcccg gcccgccgag aaagccaaag ccgccgcgtt
      661 ggcgttcgag atgggtccag gaccgcacga gcctgctctt ctgataggtc agatgcgcaa
      721 gctcgacctg cagcgcgcct tcgcgggtgc gggcgcgccg accgaagatt tccaagatca
      781 acccggtgcg atcgacaacc ttggcgcccc aggacttctc gagattgcgt tgctgcaccg
      841 gtgatagagc gcaatccatc accacgatcc cgacctcgtc gcttttgaca agaccggcaa
      901 tctcctcgac cttgcccttg ccgatgaagg tcgccgggcg aatgccgccg agcggcgcaa
      961 ttcccgatgc aactacgttg aggtcgatgg cgcgcgcgag cccaacggct tcctcgagcc
     1021 tagcctcggg cgagcgcagc acggctttgc cgcgcgcgcc cgcggcagca ggtgcccgag
     1081 agcgcagatc cggctcgatc acgagcgcgc ggccagtctc cccgccttcc ggcgggctca
     1141 ggcggtcgct gcggctatcg aaccggcgtg gctccaatca gaccttttcc gcggcgggcg
     1201 cttcctcggc gccttcgaac agctggatcg gatgacccgg catgatggtc gagatggcgt
     1261 gcttgtagac gagctgagaa tgcccgtcgc gtcgtagcag gacgcagaag ttatcgaacc
     1321 aggtgaccac accttgaagc ttcacgccgt tcaccaggaa gatcgtaagc ggcgtcttgt
     1381 tcttgcggac atgattgagg aacgtgtcct gcagattttg cgagcggtct gccgccattg
     1441 ccgttgttcc attttctcgc ccgcgcgccc cgtgccgcga gacttattgc caagccgctg
     1501 ttacccattt ttttggttat gaagcccaac agcacccgga ccccaccatt acaagccacg
     1561 tccgcggacg gcgcaagcac aagttggggg caggaaccgc ctcggcttgg gcaagccggc
     1621 ccatcaggtc cactcggcgt ggcggtgaaa ttccgcgcgc agcgcggttg caatcgaccc
     1681 cggcgcccca ttgccgatcg cacgctcgtc gatgcgaacg accggcatga cgatttggct
     1741 ggccgaggtc aggaacgcct cgcgggcgcc gtaggcctcc tcgaccgtga acggccgctc
     1801 ctccaattgg agcccctggg cgctgataac ctcgatcagc acggtgcgcg tgatgccgcg
     1861 cagaatgccg tgatccgccg gccgggtcac caccttgccg ccctttgtga cgatccacgc
     1921 gttgctcgac gacccctcgg tgatatttcc gtcaccgtcg acgaaccacg cctctttggc
     1981 tccgcgctcg cgcgccgttt gtttcgccag cacattgggc aacagcgaga ttgacttgat
     2041 gtcgacccgt tgccagcgat tgtcgggcac cgtgattacg gcaacgccgt ccgcggcgat
     2101 ccgctcgttc gccacgacgt cgaggccatg ggcggtgatc acgatgctgg gacgcgtgcc
     2161 cgccggcggg aatgcatggt cgcggcgcgc cacaccgcgc gtgatctgta gatagatgat
     2221 gccgtcgcgc acccggtttc gccgcacgca ttcgcgcatc accgtcgcga gcgcggcctc
     2281 cgacatcggc atgtcaatgc gaagctcgtc aagcgagcgc ttgagacgca ccagatgtcg
     2341 ccgctgatcg atgatcgagc cgcccctcac ctcgcagact tcgtagaccc cgtcggagaa
     2401 ctggtagccc cgatcctcga cgtggaccgt ggccgcccgt tgcggcagat agcggccgtt
     2461 gacataggca atgcgcgaca tcggccctca gtctatcccg agcgccttga gcttgcggtg
     2521 cagcgccgag cgctccatgc ccacaaactc cgcggtgcgc gaaatattgc cgccgaaccg
     2581 gctgatctgg gcgaccagat attcgcgctc gaagacttcg cgcgcgtcgc gcaaaggcag
     2641 ccccatgaga tgttcgccgc cgtcgccgcc gggcatggaa ggcaccatgg agcccacgtc
     2701 cggcggcaac atgtcggcgt tgatcaccgc ctccggatcg ccaccggcga ggatcatgag
     2761 ccgctccacg ttgttgcgca gttgccgcac gttgccaggc cagtcgtgcg actgcagcac
     2821 ggccatggcg tcgtcgccga tcaggcgctt gggtagcccc gtcgcttgcg agatctggtg
     2881 catgaaatat tcgatcaggc tgggaatatc ctcgcgccgc tcggccagcg gcggcacgcg
     2941 gatcggtacc accgaaagcc ggtgatagag atcttcgcgg aatttgccag cggcgatctc
     3001 ggcttcgatg ttgcggccgg tcgaggagat gatgcgcacg tcgacctgga ccttatgcgt
     3061 gccgctgacg cgctggaacg tctgctcgac gagtacccgc aagatcttgt tctgcgtctc
     3121 gcgcggcatg tcggcgatct cgtcgatgaa cagcgtgccg ccatgcgctt cttcgagcgc
     3181 gccgaccttg cgccctcccc cgtttgtcgg ctgctcaacc ccgaacagtt cgacctccat
     3241 gcgttccggc atcatcgccg ccgcgttgat cacgatgaag gggccgttgg tgcgtgccga
     3301 ctggccgtgg atggcgcgcg cggtcagttc cttgccggcg cccgcgggcc cgacgatcag
     3361 aatgcggcta ttggtcggag agatcttttc gatcgtctgg cgcagctggt tcatcgacga
     3421 ggacttgccg accagcgtcg agggggccaa ctgcttgagt gccttgacct cccgcttgag
     3481 ccgcgaagtc tcgagcgcgc gctgagtcac gagaacgagc cggtcggcct tgaacggctt
     3541 ttcgatgaaa tcgtaagcgc cctgcttgat cgccgcgact gcggtctcga tgttgccgtg
     3601 gcccgaaatc atcacgatcg gcaattctgg atgctgcgct ttgagcgcgt cgagtagttg
     3661 cagcccatcg agtcggctgc cttgcagcca gatgtcgagg aacaccagat tggggcggcg
     3721 gctcgccaca tgtgccagcg cgtcgtcgct gtcgcgcgcc gagcgcgtga tatagccttc
     3781 gtcctgcagg atgcccgaaa ccagttcccg gatatccgct tcgtcgtcga caatgaggat
     3841 gtcatcggcc atggcttaag cgttcgtcgc tagttgaggg gtttgaggtt gaggcgcggt
     3901 gtcggcctcc ttcgagctgg cagcttcctc agcaaagcgc agacgcatcc atgccccgcg
     3961 ctggcctggg attttgtcgg cggcatcgcc cagctcaatg cgtccgccgt gttcctccag
     4021 gatccgtccc acgatggcca gaccgagacc ggtgcccttt tcgcgggtcg tgacgtaggg
     4081 ttcgagcagc cggctgcgat tttccttcgg cagcccgatc ccgttgtcga tcacgtcgat
     4141 gacgacgtcg cctccttcgc gaccagccca gatgcggatg cggccgcggc ccagctccgc
     4201 cggcggcacc gcggcgatcg cttcggtgga gttcttgatg atattggtga gcgcctgcga
     4261 gatgagccgg cggtcgaatt ttgccggcat cgggtcttcg gcaatctcga gatcgatgtc
     4321 gaggtcggcg ttgccgacgc gatgcaggaa caccacctgc cgcaccgtgt cggcgatatc
     4381 ctccgccgtc atcaccggtt tcggcatgcg ggcgaaacgc gagaactcgt cgaccatgcg
     4441 cttgatgtcg tcgacctggc gcacgatggt gtcggtgcat tgctggaaca ccccgccatc
     4501 ctctttgatc acgctgccgt atttccggcg caggcgctcg gcggacagct ggatcggagt
     4561 gagcggattc ttgatctcgt gcgcgatgcg gcgcgcgaca tcggcccagg ccgaggtgcg
     4621 ctgggcggcg acgagctcgg tgatgtcgtc gagggtcacc acatagccgc cctcggccgc
     4681 acccgactgc tcgctcgtca ctcgcaccga tagattgcgt tcgcggccgt tgcggttgat
     4741 cgtcacctgg ccctgaacga ggcgctgcgt cccggagcga gcggcagcaa gcatgtcggc
     4801 aagttcgggg acgacctcgg ccaggggctg tcccaacacg tcggcttcaa tccgtccgat
     4861 cagctgctca gcggatcgat tcatgatgct gatgcagctg tcggcgtcga cgccgatgac
     4921 gccggcgctc gcgcccgcca gaaccgcctc ggtgaaacgg cggcggctgt cgatcaggtc
     4981 gcgggcgcgc acaatatcgt cgcgctgcgt gcgcagctcc tgcgtcatct tgttgaaggt
     5041 ctcgccgagt tgagcgaggt cgccttccga gcgtcgcgtc ggcacttgaa cgtagagatt
     5101 gccggtcgag acgacttgcg ccgcgccgat caagcgccgg atcggcgcca cgaggtagtt
     5161 ggcgaagttc agtccgatcc agaccgcgga taaaaggacg atgagcgcga tcaccgtata
     5221 catcagtgcg aacgcgatct ggatgccgat ccggcgcgcg gagaggtcgg cgtattgggc
     5281 gacgctggcc tgtgtggcgc gcagctgcgc cagcacgcgc gggtcgagca ggcgggcaac
     5341 gtacagatag gtatcgtcgt aaccgcgcag cttgatgatg gcggcgatgt aattgtcgtc
     5401 cgggaacatc gccacctgcg gctcggtgtc gttgaccgcg gccaggacgt cgggcgaagg
     5461 cttgacgaaa gcctcgctgg tccgcgagtc cacctgatcg atcacgttga cgtccttgtc
     5521 gatgagcatg accgccggca gcccgcggat cgaggcctga accgccagga actgatggaa
     5581 ctgctcacgc gactgatcga acagcggctt ggcgcgcgcg agttcgatgg cgatggcgat
     5641 gctgtcggcg cgcacgaatt gcacgtgctc gcgcacgtag gcgtcggaga cgatgagtga
     5701 attctcgatc agggaacgcg tctgctgcga gaacagccgg tcgaggccgc ggtcgagggt
     5761 cacgctcgcg accacggcga cgatgatcgc gggaacggcg gcgatgatgg agaacagggc
     5821 gacgatgcgc acgtgca
//
LOCUS       DATCWM010000566         4504 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_430898, whole genome shotgun sequence.
ACCESSION   DATCWM010000566 DATCWM010000000
VERSION     DATCWM010000566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4504
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_430898"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..653
                     /gene="prmC"
                     /locus_tag="VIQ50_11150"
     CDS             <1..653
                     /gene="prmC"
                     /locus_tag="VIQ50_11150"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEY9360981.1"
                     /translation="VARIRGEKEFWGLPFKLNSETLLPRPETETVVEAALAALDRDNR
                     KSRALRIVDLGTGSGALLLSLLSGLPRACGIGTDISVAALQCARDNAVALGLSARASF
                     VACDYGAALGAPADLLVSNPPYVARADIAGLQAEVRDFDPRRALDGGPDGFDGYRTIA
                     SDARRLLAPEGILVVELGQGQLGAVTAIFAATGLEPAAPRYDLSGIPRALVMQARP"
     gene            1110..1796
                     /locus_tag="VIQ50_11155"
     CDS             1110..1796
                     /locus_tag="VIQ50_11155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4167 domain-containing protein"
                     /protein_id="HEY9360982.1"
                     /translation="MRNGQNKRMRGRNNHNHRKSHNPMVRVYESNGPDVKIRGNPSHI
                     AEKYVQLARDALTSGDPISAENYYQHAEHYYRVIAAAQEQFRQNNPHIPRPENEAAGA
                     REGGFDDGEDDGQPAMSGSSDSPYGTREPQPYIPRDAQPFPQHQERQPHQRPQGQAPT
                     DGNVDRLPSFITGGQQHQPHQGSPQGQNGHDRQGDRFPLHRRRRRHRGPRPDMQGGGE
                     GGDEPSAHGD"
     gene            complement(1848..2579)
                     /locus_tag="VIQ50_11160"
     CDS             complement(1848..2579)
                     /locus_tag="VIQ50_11160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009029268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEY9360983.1"
                     /translation="MSIDVVDLRNFYAQRLGVVARRFVGRGIRKRFADTRGMSVLGVG
                     YPTPYLGLFREEAERCLAFMPAAQGVVKWPTDRPGLAALVDELEMPLSDSEVDRALLV
                     HALEVARDPIALLREVWRVLAAGGRLLIVVPNRRGVWARLDTTPFGHGRPYSRSQITQ
                     LLREAWFTPTGWEDALHVPPVARGWFLRSAVAWERAGSAVAVPFAGVHIVEATKQVYR
                     AIPARRARARLVPALEPALVPSPGR"
     gene            2698..3465
                     /gene="gloB"
                     /locus_tag="VIQ50_11165"
     CDS             2698..3465
                     /gene="gloB"
                     /locus_tag="VIQ50_11165"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004416 - hydroxyacylglutathione hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0019243 - methylglyoxal catabolic process
                     to D-lactate via S-lactoyl-glutathione [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HEY9360984.1"
                     /translation="MAAQTRLFLCLTDNYGVLLHDPESGATAAIDAPEAAPVEAALKA
                     SGWRLTDILVTHHHADHTGGIAELKQRHRCRVVAPHGEAARIPLVDATVREDDEVRVG
                     SLKGRVLETPGHTAGHISYFFPADKLAFVGDTLFSIGCGRVIEGTPEMMWQSLLKLRG
                     LPDDARIYCGHEYTKANVRFAKTIEPANAALNAREREVDKLLAAGEPTVPSTMGAEKA
                     ANPFLRADVPEVAKSVGLAGSPAWKVFAEIRERKNRS"
     gene            complement(3472..4110)
                     /locus_tag="VIQ50_11170"
     CDS             complement(3472..4110)
                     /locus_tag="VIQ50_11170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEY9360985.1"
                     /translation="MLTMQSTRFAVAVLAAALSLLAASEQSAPAQADWINALRQGGYV
                     IVFRHGASRQDQADTDPLNPSNVAQQRQLTDAGRAKAKEIGEAFRKLRIPVGQVQTSV
                     FNRAVETGSLMNLGQVTSSLDLTDQGIVLTPAENYRRSQALRQLAATVPPAGTNTILV
                     THKTNILDTFGKELFDVREGEASVFQPDGGGYKLIVRVQADEWSKLAQAAPN"
     gene            4232..>4504
                     /locus_tag="VIQ50_11175"
     CDS             4232..>4504
                     /locus_tag="VIQ50_11175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY9360986.1"
                     /translation="MLSAPEVMRLLDLKPHPEGGHFRETFRDLRTVDGGRAVSTAAYY
                     LLARGERSHWHKVDAVEAWHYHAGAPLKLEIALDANGPVECLTLGAD"
BASE COUNT          832 a         1513 c         1463 g          696 t
ORIGIN      
        1 cggtcgcgcg catccgcggc gaaaaagaat tttgggggct gccgttcaaa ttgaattccg
       61 agaccctcct ccctcggccg gaaaccgaga ccgtggtcga agcggcgctc gccgcgctcg
      121 atcgcgataa tcgcaaatcg cgcgcgctgc gcatcgtcga tctcggcacc ggctccggcg
      181 cgctgctgct ttcactgttg tctgggctcc cgcgcgcctg cggcatcggc accgacatca
      241 gcgtcgcggc gttgcagtgc gcccgcgaca acgccgtcgc gctcggcctt tccgcccgtg
      301 catcgttcgt ggcttgcgac tatggcgcgg ctctcggcgc gccggccgat ctcctcgtgt
      361 ccaatccgcc ctatgtcgcg cgtgccgaca tcgccggact gcaagccgag gtccgcgact
      421 tcgacccgcg ccgcgcgctc gacggcggac ccgatggctt tgacggctac cggacaatcg
      481 catcggacgc acggcgtttg ctggcgcccg agggcatcct ggtcgtcgaa ctcgggcagg
      541 gccaactcgg cgccgtgacc gcgatcttcg ctgcgaccgg gcttgaaccc gccgcgccgc
      601 gatacgatct ttctggtatc ccccgggccc ttgttatgca ggcgcggcca tgaagggtcc
      661 acatttctgg taccaaaaaa gcacttggat tgtgaaccaa gaccgactag gtttcgttca
      721 cggaatcgac ccgagacagt tgagcgccga tagcgagccc cggagcagga ctgcggagag
      781 ccgacggtgc ggaggaagcg aacgaaggat gccggatgag ccggcaagcg gttcgcccaa
      841 tcgggatagg atgcttcatc ggttcggtgc tgatccgcgg gcgacgcgga catgcttgtg
      901 aggaagagct gggcaacgcc gcggtaggcc gcggataagg ggttgctgct tcgcgacagg
      961 gaacgtgaca ttgcggcgga cggcgctgct tttgcctcct gcttgggtgg gcgaggacgc
     1021 gctcgttcac gccacccgca agagcctcgg atctttttgg tgaaacggcg gcgagccgcc
     1081 acaacgaagg ggttggcaac aggcgagtca tgagaaacgg tcaaaacaag cgcatgcgcg
     1141 gacgcaacaa ccacaaccac cgtaaaagcc acaatccgat ggtgcgggta tacgagtcga
     1201 acggtcccga tgtgaagatt cgcggtaatc catctcacat tgcagaaaaa tatgttcaac
     1261 tcgcgcgcga cgcactgacc tccggcgatc cgatctccgc ggagaattac taccagcacg
     1321 ccgaacacta ttaccgcgtg atcgccgcgg cgcaggaaca gtttcgccaa aacaatcccc
     1381 acatccctcg tccggagaac gaagcagccg gagcgcgcga aggcggcttc gacgacgggg
     1441 aggacgatgg gcagccagcg atgagcggtt catccgattc gccttacggc acgcgcgagc
     1501 cgcaacctta tatcccgcgc gatgcgcaac catttccgca gcatcaagaa cgccagccgc
     1561 atcagcgccc gcaaggccaa gcgcctaccg acggcaacgt cgaccgcttg ccgtccttca
     1621 tcaccggcgg acagcagcac cagccgcacc aaggctcgcc acagggccaa aacggccacg
     1681 accgccaggg cgaccgtttc ccgctgcatc gccggcgccg ccgccaccgc ggaccgcgcc
     1741 cggacatgca gggcggcggc gagggcggag acgagccgtc tgcgcacggt gattgatcgc
     1801 tcggccggcc cacctgcgga caactcgatg attggcgtcg ataacagtta gcgccctggc
     1861 gaaggcacga gcgcgggctc gagcgcaggc acgagacgcg cccgcgcgcg ccgcgccggg
     1921 atggcgcgat agacctgctt cgtcgcctcg acgatgtgca cgcccgcgaa cggcacggcg
     1981 acggcggagc cagcgcgctc ccaggcgact gccgagcgca agaaccatcc gcgcgcgacc
     2041 ggcggcacat gcaaggcgtc ctcccatccc gtcggcgtga accaggcctc gcgcaagagc
     2101 tgcgtgatct gcgagcgcga ataaggccgg ccgtggccga acggcgtcgt gtcgaggcgg
     2161 gcccaaacgc cgcgccggtt cggcaccacg atcaacagcc gcccgcccgc ggccaagacg
     2221 cgccagactt cgcgcagcaa ggcgatcgga tcgcgcgcca cctcgagcgc gtgcacgagc
     2281 agcgcccggt cgacctcgga atcggagagc ggcatctcca attcgtcgac cagcgcggct
     2341 agaccgggcc ggtcggtcgg ccatttcacc accccctgcg ccgcgggcat gaaggcgagg
     2401 cagcgttccg cctcctcgcg aaacagaccg agatatggcg tcggataacc gacccccaac
     2461 acgctcatgc cgcgcgtgtc ggcgaagcgc ttgcgaatgc cgcgcccgac gaagcggcgc
     2521 gccacgacgc cgaggcgctg ggcatagaaa ttgcgcagat cgacgacatc gatggacatg
     2581 gcaagaccgt agcatgaatt tggccttgtc cgccgtttgc ggcggcgaag ctattgccac
     2641 gagccttgcg cgcggtgcct aatcccgccg ggctgggcga gcagactgga gagcgatatg
     2701 gccgcacaaa cccgtttgtt tctgtgcctg acggataatt acggcgtgct cctgcacgac
     2761 cctgaaagcg gcgcgacggc ggcgatcgac gcgcctgagg ccgcgccggt cgaggccgcg
     2821 ctgaaggcaa gcggctggcg gctcaccgac attcttgtca cccaccacca cgcggaccac
     2881 accggcggca tcgccgaact caagcagcgc caccgttgcc gcgtggtggc cccgcacggc
     2941 gaggcggcac gcattccgct cgtcgatgcg accgtgcgcg aggacgacga ggtgcgagtc
     3001 ggttccctta agggacgcgt gctcgagacg ccgggacaca ccgccgggca catcagctat
     3061 ttcttcccgg ccgacaagct tgccttcgtc ggcgacacct tgttctcgat cggctgcgga
     3121 cgcgtcatcg agggcacacc ggaaatgatg tggcagtcgc tgctcaagct gcgcggcttg
     3181 cccgacgatg cgcgcatcta ctgcggccac gaatatacga aggcgaacgt ccgcttcgcc
     3241 aagacgatcg aaccggcgaa cgccgcgctc aacgcccgcg aacgcgaggt cgacaagctc
     3301 ctcgccgccg gggagccgac cgttccctcg accatgggcg cagaaaaggc ggcaaacccg
     3361 ttcctgcgcg cggatgtccc ggaagtggcg aaatcggtcg ggcttgcggg cagtccggct
     3421 tggaaagtgt tcgccgaaat ccgcgagcgc aagaatagat cctgacctgc gtcaattcgg
     3481 ggccgcttgc gccagcttgc tccactcgtc ggcctgaacg cggacgatca acttgtagcc
     3541 gccgccatcg ggctggaaca cggaggcctc gccttcccgc acatcgaaca gctccttgcc
     3601 gaaggtatcg aggatgttgg tcttgtgggt gacgaggatc gtattggtgc cggcgggcgg
     3661 cacggtcgcc gcgagctggc gcagcgcctg agagcgccgg taattctccg caggggttaa
     3721 gactattccc tgatcggtga ggtcgagcga ggaggtcacc tggccgaggt tcatgagcga
     3781 gccggtctcg accgcccggt tgaacacgct ggtctgcacc tggccgaccg gaatcctgag
     3841 cttgcggaac gcctcgccga tctccttggc tttcgcgcgc ccggcgtcgg taagctggcg
     3901 ctgctgcgcc acgttgctgg gattgagcgg atcggtgtcg gcctggtctt ggcgcgatgc
     3961 gccatgccgg aagacgatca cgtatccgcc ctggcgcagc gcgttgatcc agtcggcttg
     4021 cgccggtgcg ctttgctcgc ttgccgccag caacgaaagc gccgcggcca agaccgcaac
     4081 ggcaaaacgg gtggactgca ttgtcagcat cggtcggctc ccctctccaa gctggatcga
     4141 gcaaacggcg caggcctcgc tcgcaacgcg aggaaagcgt aaaattgttg cctgcaaaag
     4201 acaatgtcca catgttagat gaaggtaccg catgctctcc gcccccgaag tgatgcgcct
     4261 gctcgatctc aaaccgcatc ccgagggcgg acattttcgc gagacgttcc gcgacctccg
     4321 cacggtggac ggcggacgcg cggtatcgac cgcggcgtat tacctgctgg cgcgcggcga
     4381 gcgctcgcat tggcacaagg tcgatgcggt cgaggcctgg cactatcacg ccggcgcccc
     4441 gctcaagctc gagatcgcgc tcgacgccaa cggcccggtc gaatgcctca cgctgggcgc
     4501 cgat
//
LOCUS       DATCWM010000567         2347 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_495586, whole genome shotgun sequence.
ACCESSION   DATCWM010000567 DATCWM010000000
VERSION     DATCWM010000567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2347)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2347)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2347
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_495586"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..774
                     /locus_tag="VIQ50_11180"
     CDS             <1..774
                     /locus_tag="VIQ50_11180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007603382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEY9360987.1"
                     /translation="PPAKPNKQAEAERLELVHAVQILYALNERPLVIALMASIGETQN
                     DPGTLSALGELAEQHEDARGMLHLGKGALARGLPLDYYAFPTVGVPRYTPIAPSIESA
                     MLYAIIRQESAFDPSDWSHAQAMGLMQVTPEAGRDTCKRFACTYDFKRLRSDSPYNLQ
                     VGAAEIAGVLQDYRGNPVLAFAAYNAGRGRVQEWIAKYGDPRDPKVDPVDWVERIPFM
                     ETRNYVQRVMENLQVYRVRFGNEAPLAVDRDPRRDAAAQ"
     gene            1104..1298
                     /locus_tag="VIQ50_11185"
     CDS             1104..1298
                     /locus_tag="VIQ50_11185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9360988.1"
                     /translation="MIDATVYRAMAAEHHRLAGMCRSPESRQQHLSLEQQFRALAECE
                     ERLQRPPVPQQVQEPQSTSA"
     gene            complement(1290..>2347)
                     /locus_tag="VIQ50_11190"
     CDS             complement(1290..>2347)
                     /locus_tag="VIQ50_11190"
                     /inference="COORDINATES: protein motif:HMM:NF014542.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEY9360989.1"
                     /translation="NSMLDLFPSRDAGRFGRRLKRARGAKIPVSVLTGFLGAGKTTLV
                     RRFLATPEGAGTAVVINEFGSVGIDDALLRASSDDVTLLGNGCLCCNTRSDLQNALRN
                     LFAERAQGTLPQFRRIVIETSGLADPGPILQTFATDRALGSEFHVEVVLAVVDAAGGL
                     DTLAWSAEARKQVILADRLVVTKSDLAKPQAVEKLARRLRVLNPRAAVHSAIDGDLDP
                     RCLLESDAPAAAARAGFVAEAEHSDGILSFVLSADAPLAWDAFARAMETLIALRGGDL
                     LRVKGLLNVAGCPGPVVVHAVQHLAHPPVELAAWPAEDRTSRLVFITRGIPERQVRDL
                     FDSVRALADGSGVTQSS"
BASE COUNT          407 a          775 c          794 g          371 t
ORIGIN      
        1 ccgccggcga agccgaacaa acaggcggag gcggagcggc tcgagctcgt tcacgctgtc
       61 cagattcttt acgcgctcaa cgaacgcccg ctcgtcatcg cgttgatggc cagcatcggc
      121 gagacgcaga acgaccccgg cacgctttcg gcgctcggcg aattggcgga gcagcacgag
      181 gacgcgcgcg ggatgctgca tctcggcaag ggggcgctgg cgcgcggcct gccgctcgac
      241 tactacgcgt tcccgaccgt cggcgtgccg cgctatacgc cgatcgcccc gagcatcgag
      301 agcgcgatgc tctacgccat cattcgccag gagagcgcgt tcgatccgtc cgactggtca
      361 cacgcacaag cgatgggcct gatgcaggtg acgccggaag cgggacggga tacctgcaag
      421 cgctttgcct gcacctatga cttcaagcgt ctgcgcagcg actcgccgta taatctgcag
      481 gtcggtgccg ccgagatcgc cggggtgctg caggactacc gcggcaatcc ggtcctggca
      541 tttgccgcct acaacgccgg ccgcggccgg gtgcaggagt ggatcgcaaa gtacggcgat
      601 ccacgcgacc cgaaggtcga tccggtcgat tgggtcgagc gcatcccgtt catggagacc
      661 cgcaactacg tgcagcgggt gatggagaac ctgcaggtct atcgcgtgcg cttcggcaat
      721 gaggccccgc tggcggtcga cagggatccg cggcgcgacg ccgccgcgca gtagtactcc
      781 ggtcagtcat tgactcgtca tgcccggcct tgtgccgggc atcgactttc tgcgctagag
      841 atttgttgca caggctggac ggattgtccc ccggggttga acccggcgag gtcgagcccg
      901 gcgatgtccg cctccgcaca taggcgcaca gagtctctct cgactttatg gccgtaaagg
      961 cgcaaactga ccttgctcga aacgccagcg caaagcgttc gagactttcc gttccaaaaa
     1021 cttattccga cgggacccgt tctagcgtcc cacgacgttt cctccggcgc cgccggcgga
     1081 acgggatcgc gtgggaggac acgatgatcg atgccaccgt atatcgggcg atggccgccg
     1141 aacaccatcg cctcgccggt atgtgccgct cgcccgaatc gcgccaacag cacttgtccc
     1201 tggaacaaca attccgggcg cttgccgagt gcgaggaacg cttgcaacgg ccgcctgtgc
     1261 cgcagcaagt gcaggagccg caatccacgt cagcttgatt gcgtcactcc ggagccgtcc
     1321 gccaaggcgc gcaccgagtc gaagagatcg cgcacttggc gctcgggaat accgcgggta
     1381 atgaacacca ggcggctcgt gcggtcttct gcgggccacg ccgcgagctc gaccggcgga
     1441 tgggcgaggt gctggaccgc gtgcaccacc accggtccgg ggcagccggc gacgttgagc
     1501 aggcccttca cgcgcaagag atcgcctcca cgcaaggcaa tgagcgtctc catggcgcgc
     1561 gcgaaggcat cccaagcgag cggcgcgtcc gcgctgagaa cgaaactcaa gatgccgtcg
     1621 ctgtgctcgg cttcggcgac gaagcccgcg cgcgccgcag cggccggcgc atcgctctcg
     1681 agcagacagc gcgggtcgag atcgccgtcg atcgcgctgt gaacggcggc gcgcggatta
     1741 agcacgcgaa gccgccttgc aagtttctcc accgcttgcg gcttggcgag gtcgctcttc
     1801 gtgacgacca gccggtcggc gaggatgacc tgctttctcg cctccgccga ccacgccagc
     1861 gtgtcgaggc cgccggcggc gtcgacgacg gcgaggacca cctcgacgtg gaattcggag
     1921 cccagcgccc gatccgtggc gaaggtctgc aggatcgggc cggggtcggc gagcccgctg
     1981 gtctcgatca cgatgcgcct gaattgcggc agcgtgccct gcgcgcgctc ggcgaagagg
     2041 ttgcgcagcg cgttctgcag gtcggagcgc gtattgcagc acaggcagcc gttgccgagc
     2101 agcgtgacgt cgtcgctcga ggcgcgcagg agcgcgtcgt cgatgccgac gctgccgaac
     2161 tcgttgatga cgaccgcggt gcccgcgcct tcgggggtgg cgagaaagcg gcgcaccagc
     2221 gtggtcttgc cggcgccgag gaagccggtc aggacgctca ccggaatttt tgcgccacgc
     2281 gcgcgcttga gcctgcgccc gaaccggcct gcgtcgcgag aaggaaagag atcgagcatg
     2341 gaattgt
//
LOCUS       DATCWM010000568        10084 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_360480, whole genome shotgun sequence.
ACCESSION   DATCWM010000568 DATCWM010000000
VERSION     DATCWM010000568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10084
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_360480"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..873)
                     /locus_tag="VIQ50_11195"
     CDS             complement(<1..873)
                     /locus_tag="VIQ50_11195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HEY9360990.1"
                     /translation="MFNFEDALKLIPEQTIVCVGDLMLDDFVYGEVSRISPEAPAPIL
                     AVHRNELTVGGAGNVARNIAALGARCIFLGVVGEDDASRTLMRALAAEPLIEPHIVVD
                     ARRPTTRKVRFVSEHHATHLLRADWELAEPLDAKTEKALIDRTLAALPRAGSVVLSDY
                     AKGTLTPRVIRAVIEAANASGIPIIVDPKAVDYSIYRGATVVKPNRKELSEATRRRAD
                     SDADVIAAAAELNGMLGTEAVVVSLSDAGLMLVPTNGAPIHVPAYPVKLGDTSGAGDA
                     VVAALAVLLATKAGY"
     gene            complement(910..1890)
                     /gene="rfaD"
                     /locus_tag="VIQ50_11200"
     CDS             complement(910..1890)
                     /gene="rfaD"
                     /locus_tag="VIQ50_11200"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008712 - ADP-glyceromanno-heptose
                     6-epimerase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HEY9360991.1"
                     /translation="MLLVTGGAGFIGSNLIAGLNEAGRTDIVVNDALGEKGKWRNLGK
                     RQVADVVPPGELIAWLDGRRLEAVIHLGAVSDTTATDADLVLATNFRLSLKLLDWCTA
                     TSTPFIYASSAATYGDGAAGFDDDWSLTALQRLKPMNLYGFSKHLFDLAVVDRFANGA
                     KLPPQWVGLKFFNVFGPNEYHKGEMMSLVAKRFDEAKGGTAVRLFKSHRDGVADGDQK
                     RDFIYIDDAVAVMRWLLETPSVSGIFNVGTGQARSFRDLIAAMFRALGRDPAINYVDM
                     PAAIRNQYQYFTQAKVENLRRVGYNAGFTPLEEGVSRYVTLFLNQSDRYR"
     gene            2135..3169
                     /gene="waaF"
                     /locus_tag="VIQ50_11205"
     CDS             2135..3169
                     /gene="waaF"
                     /locus_tag="VIQ50_11205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HEY9360992.1"
                     /translation="MTEAPILIIPYMWIGDFVRCHTVVRLLRQRWPTAAIDVLTTSMV
                     APLLDYMPGVRKGIVADLPRQRLALNQHRALARRLRAENYGHALVMPRTWKAAVAPFL
                     AGIPRRTGFVGEGRFGLINDLRFGERRLPRMADRCAVLALAKGERAPPAWPLPELKVP
                     AAECATWRQRLGLASDGRPVVALAPGAVGPSKRWPGASYAELARRLRAEGHWVWVIGG
                     PNEKELAAEIVDRAQIRDLTGPDLRNAILALAAADLAVSNDSGLLHVAAALGTPAIGI
                     FGPTSAWHWAPLNPIAAVVETTDELACRPCHKPVCRLGHHRCMREISVDRVAMAVRQT
                     MAGPLRRTSI"
     gene            complement(3212..4159)
                     /gene="waaC"
                     /locus_tag="VIQ50_11210"
     CDS             complement(3212..4159)
                     /gene="waaC"
                     /locus_tag="VIQ50_11210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HEY9360993.1"
                     /translation="MPDILFIKTSSLGDVIHHMPALTEARRQCPQAQFSWVVEEAFAP
                     LVRVHPAVTAVIPIASRRWRGALAAPSTWREITGFARAVRARCYDEVIDTQGLLRSAV
                     VARLAHGRRHGYDASSIREPAAAWFYDIKHRVSRGLHAITRNRMLTGLALGYVPDGST
                     DFGLSRHEIQAMSAAPYGILFHATARAEKEWPEAAWIALGHVLTARGGSLLLPWGTEA
                     EHARSKRIAAEVANARVPERQPLDRMAALIAGASFVIGVDTGLIHLAAALGVPLVAIF
                     TASEPGLTGPMGSGPIAVVGGKHRQPSVADVVEAFRQLT"
     gene            4294..5280
                     /gene="galE"
                     /locus_tag="VIQ50_11215"
     CDS             4294..5280
                     /gene="galE"
                     /locus_tag="VIQ50_11215"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HEY9360994.1"
                     /translation="MTVLVTGGAGYIGSHMVHALLDAGERVVVLDDLSTGFDWAVAQG
                     AQFVIGDAGDQALVAHLMAEHRIEAIVHFAASIVVPDSVRNPLGYYHNNTVNSRALIE
                     AAVKGSVRHFIFSSTAAVYGNPERVPICEGDATVSTSPYGSSKLMTEIMLRDATLAHG
                     LRHVILRYFNVAGADPLGRAGQSTKGATHLIKVAVEAALGLRPKVEVFGTDYPTPDGT
                     CIRDYIHVCDLVRAHSDALAYLRAGGDPVTLNCGYGRGFSVLAVIDAVKRMSGADFKV
                     ELAGRRLGDPAWVVAASDRARAVLKWQPHFDDLESIVCHALAWERKLLTRAS"
     gene            5371..7185
                     /locus_tag="VIQ50_11220"
     CDS             5371..7185
                     /locus_tag="VIQ50_11220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011471893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9360995.1"
                     /translation="MLKSYWQSLFADPDGAPALVRRLLMQQAAGQWRRYALAFGLMGI
                     AAASTALGAYLVGDVINQAYVHKNLPGIIVLALVTAVIFMIKGMATYGQAVMLARIGN
                     GIIADNQQRMFAKLLHHNVGFFADRHSSEFMARLNTGAAAASQVLNLLITAFGRDLLS
                     LVGLLAVMAVQDPVLSALSIIVVPPAMLILRKMIRRIKTIAHHQFTGSARILETLQET
                     LQGMRTLKAFNLEDAMSARFNSRVAELENESNKWARVAYRSGPLMEALGGFAIAGALI
                     YGGFRVIETGATPGQFFSFLAAFMLAYEPAKRLARLNLDLNSGLVGVRILFDVIDHPP
                     TEPDDAGMPPLHLSSARVEFANVQFAYRPGEKVIRNLSFVAEPGKVSALVGPSGGGKS
                     TILNLILRLYEVNSGAIVVDGQNIAAVSRRSLRSQIAYVGQDVFLFRGSVRENIALGR
                     LGATEAEIVAAARAAYAHDFIMAFPRGYDTPVGEHGLQLAGGERQRISIARALLKDAP
                     LILLDEATASLDSESERQVQGAIEHLCQGRTTIVIAHRLHTVVDAHRIFVIEDGAVVE
                     SGRHDELLRRGGRYTSFYRLQLREQEPSVPPVAIASSA"
     gene            7211..7921
                     /locus_tag="VIQ50_11225"
     CDS             7211..7921
                     /locus_tag="VIQ50_11225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEY9360996.1"
                     /translation="MPAVADSYVIPPPPRSAIAVAGSDKTFPVRRIWCVGRNYEEHIR
                     EMGHDVRDPPFFFAKPADAIVPDGASVPYPPLTKDMHHEVELVVALKSGGRNIPLDRA
                     LDCIYGYGVGIDLTRRDLQIASRDMKRPWEIGKAFDASAPCGPLQPASKIGHPSKGRI
                     ALMANGKVRQDGDLAQMIWKVPEIIVKLSEMVELAAGDIIMTGTPSGVAATVSGDKLE
                     CEIEGVGRLTVTIAPPAA"
     gene            complement(7934..8638)
                     /locus_tag="VIQ50_11230"
     CDS             complement(7934..8638)
                     /locus_tag="VIQ50_11230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015605179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9360997.1"
                     /translation="MLRVENLDVLHGDARALDDVSLEIDEGAIVAIVGANGAGKTSLI
                     RTIAGMLRPARGRIAFRDIDIAGWESHRVCNLGIGQVAEGRQVFPRLSVAENLEVGAM
                     LPRARAARTANLQRVFGLFPVLAERLAQPAGTLSGGEQQMLAIGRCLMGAPELVMFDE
                     PSLGLAPAVVQQLLRTIRDLNREGLTCVLVEQNVAVSLKLAARAYVLENGRITLSGPG
                     EALLADDRVRRAYLGS"
     gene            complement(8638..9366)
                     /locus_tag="VIQ50_11235"
     CDS             complement(8638..9366)
                     /locus_tag="VIQ50_11235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007594457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9360998.1"
                     /translation="MTPLLAVEGVSKRFRGLLAVDDVSFQVARGSICAVIGPNGAGKT
                     TLFNIIAGAFAPDRGSIAFGGQRIDGLAPDEICRRGIGRTFQLVRPFPALSVEDNVLI
                     GAMLRRRDPASARRHAHEVLARLELFGKRHQLASTLTLPDRKRLEVARALATDPKLLL
                     LDEVMAGLRPAETDRMISILRELNRELGLTILLIEHVMRAVMALAARVLVLHHGAPIA
                     EGAPDAVVRDPAVVQSYLGAEAVD"
     gene            complement(9363..>10084)
                     /locus_tag="VIQ50_11240"
     CDS             complement(9363..>10084)
                     /locus_tag="VIQ50_11240"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9360999.1"
                     /translation="VAIAAACGAVIGFLAFRFGVGGVYFAILTIAFAEFARIGFDHFR
                     WVGASSGFFLPVANYTRNDLWNLRGDPTMFYYVMLALTVAAFALCHVLLKSRVGYYWL
                     AIREDEVAARSLGIDTFRYKMYAIVLSGGMTAVAGAFFAFYYNNLFPEQVFHISRSIE
                     LILGPIIGGIGTLFGPLVGALLLTGLSEAMQELLTALGLDAPGAKQVFYGLCLLVVVM
                     ALPGGVWPWLAGKLGVTGPRS"
BASE COUNT         1840 a         3322 c         3207 g         1715 t
ORIGIN      
        1 atagcccgcc ttggtggcca gcaacacggc gagcgcggcg acgacggcgt cgcccgcgcc
       61 ggacgtgtct cccagcttga ccggataagc tggcacgtgg atcggcgcgc cgtttgtcgg
      121 cactagcatc agaccggcgt cgctgagcga gacgacgacc gcctctgttc ccagcatccc
      181 gttcaattcc gctgccgccg cgatcacgtc cgcatcggaa tcggcgcgcc gccgcgtggc
      241 ttccgaaagt tccttgcgat tgggcttgac caccgtcgca ccgcgataaa tggagtaatc
      301 gacggctttg ggatcgacga taatcggtat cccggacgca ttcgccgcct cgatcactgc
      361 ccggatgacc cgcggcgtca gcgtgccttt cgcataatcg gataagacga cgctgcccgc
      421 gcgcggcagt gcggcgagcg tgcgatcgat cagggccttc tccgtcttgg catcgagcgg
      481 ttccgccaat tcccagtcgg cgcgcaacaa atgcgtggca tgatgctcgg agacgaagcg
      541 cactttgcgt gtcgtcggac gccgcgcgtc cacgacgata tgcggctcga tcaacggttc
      601 ggcggcaagc gcccgcatca gcgtgcgact cgcgtcgtcc tctcccacga ctccgaggaa
      661 gatgcagcgt gcgccgagcg cggcgatgtt gcgcgccacg ttgccggcgc cgccgacggt
      721 gagttcgttg cggtgtacgg cgagaatcgg agcaggcgcc tcgggcgaga tgcgcgagac
      781 ctcgccgtat acgaagtcgt cgagcatcaa atctccgacg cagacgatgg tctgctcggg
      841 aatgagcttg agcgcgtcct cgaaattgaa catggcgcta tcgctagatg gttgtcggtg
      901 cggcgacctt caccgatacc gatcggattg gttcaggaac aaggtgacat agcgagatac
      961 cccctcttcg agcggggtga agccggcgtt gtagcctacc cggcggaggt tttcgacctt
     1021 ggcttgggta aaatattggt actgattgcg gatcgccgca ggcatatcga cgtagttgat
     1081 agccgggtcg cgcccgagcg cacgaaacat ggcggcaatc agatcgcgga agctgcgcgc
     1141 ctggccggtg ccgacgttga aaatgcccga tactgatggc gtctcgagta gccagcgcat
     1201 caccgcgact gcgtcatcga tgtagatgaa gtcgcgtttc tggtcgccgt cggcgacgcc
     1261 gtcgcgatgg gacttgaaca agcgcactgc cgtgccgcct ttcgcctcgt cgaagcgctt
     1321 ggccaccagg ctcatcattt cccccttgtg atattcattg gggccaaaca cgttgaaaaa
     1381 tttgagcccc acccactgcg gcgggagctt cgcgccgttc gcgaagcggt cgacaaccgc
     1441 gagatcgaag agatgtttgc tgaagccata caagttcatt ggcttgagcc gctgcagcgc
     1501 agtgagcgac caatcgtcat cgaagcccgc ggcgccatcc ccgtaagtcg cagccgaaga
     1561 tgcatagatg aacggggtag acgtcgcagt gcaccaatcc agaagcttga gcgagagccg
     1621 aaaattggta gcgagaacga gatcggcgtc ggtggcggtg gtgtcggaga cggcgccgag
     1681 atggatgacc gcctcaagcc tgcggccatc gagccaagcg atgagctcgc ccggcggcac
     1741 cacgtcggcg acttggcgtt tgcccagatt gcgccatttg cccttttcgc cgagcgcgtc
     1801 gttgacgaca atgtcggtcc gccccgcctc gttgaggccg gcgatcagat tggacccgat
     1861 aaagccggct ccgccagtga ccaatagcat tcctacccgc cgaggctgct gcctcccttt
     1921 gcccgaaggc gttcaggggt gcaacttccc tgggcggaca gcgtaaagag aagccccgat
     1981 cctcatcccg tcgctcctga gggcactgga cagccagcaa aggccaagct aaccggcctt
     2041 cccgtcagcc agagagcaat gcacgtagaa atgaggattt attcagttca ttagaaatga
     2101 attgaacttc acaagccagg gtgtcaccca agatatgaca gaagcgccaa tcctcatcat
     2161 cccgtacatg tggattggcg acttcgtgcg ctgccatacg gtggtgaggt tgctgcgaca
     2221 acgctggcca actgccgcga tcgacgtatt gacgacctcg atggtcgccc cgctcctcga
     2281 ttacatgccg ggcgtacgca aagggatcgt cgccgacctg ccgcgccagc gcctcgcgct
     2341 gaaccagcat cgcgcccttg cccgcaggct gcgggccgag aattacggcc acgcactggt
     2401 catgccgcgg acttggaagg ccgcagtggc ccctttcctc gccggaattc cccggcgcac
     2461 aggttttgtc ggcgaagggc gctttggtct catcaacgat ctgcgcttcg gcgagcgccg
     2521 gctcccgcgt atggccgatc gatgcgccgt gctcgccttg gccaagggtg aacgcgcgcc
     2581 gccagcctgg ccgttgcccg aactcaaggt gccggcggcc gaatgcgcca cctggcgcca
     2641 gcggctgggg ctcgcgtccg atggtcgccc ggtcgtcgcg ctcgcgccgg gggcggtcgg
     2701 tccgtccaag cgctggccgg gcgcatctta cgccgagctc gcgcgccgcc ttcgtgccga
     2761 aggccactgg gtatgggtga tcggcggccc gaatgaaaag gaactcgccg ccgaaatcgt
     2821 cgaccgcgcg cagatccgcg acctcaccgg gcccgacttg cgcaacgcca ttctcgcgct
     2881 cgccgcggca gacctcgcgg tatcgaacga ttccggtcta ctgcacgtcg cagcagcgct
     2941 ggggaccccg gcgatcggga ttttcggccc gaccagcgcc tggcactggg ctccgctcaa
     3001 tccgatcgcc gcggtagtcg aaaccaccga cgaattggcg tgccggccct gccacaagcc
     3061 ggtctgccgg ctcgggcacc atcgctgcat gcgcgagatt tccgtggatc gggtcgccat
     3121 ggcggtccga caaacgatgg ccggcccgct ccggcgcacg tcgatctgag ccctgcgtcg
     3181 gcggctttcc ccgggtacgg gcagtagagc gctaggtcag ttgtcggaac gcctccacca
     3241 catctgcgac ggagggctgc ctatgcttgc cgcccaccac tgcgattggc cctgagccca
     3301 tcggcccggt gaggccgggc tcgctcgcgg tgaagatcgc gacgagcggc acgccgagcg
     3361 ccgcggcaag atggatgagg ccggtatcga cgccgatgac aaaggacgcc cccgcgatca
     3421 gcgccgccat ccggtcgagg ggctgccgct ccggcacgcg ggcgttcgcg acctctgcgg
     3481 cgatgcgctt gctgcgcgcg tgttctgcct cggtgcccca gggcagcaat aatgacccgc
     3541 cgcgtgcagt tagcacgtgg ccgagcgcga tccatgcggc ctcgggccat tccttttccg
     3601 cccgtgcggt ggcgtggaac aggatgccgt aaggcgctgc gctcatggcc tgaatctcgt
     3661 ggcgtgacag gccgaagtcg gtgctgccat ccggcacata gccgagcgca aggccggtga
     3721 gcatgcgatt gcgcgtgatc gcatgcagac cgcgcgagac gcgatgcttg atgtcgtaaa
     3781 accacgccgc cgcgggctcg cggatgctgc tcgcgtcata gccgtgccgg cggccatggg
     3841 cgagccgcgc aacgacggcg gagcgcagga gaccctgagt atcgatgacc tcgtcgtaac
     3901 agcgcgcacg caccgcgcgg gcgaagccgg tgatctcgcg ccacgttgaa ggcgcagcca
     3961 gcgccccgcg ccaacggcgc gatgcaatcg ggatgacggc ggtgacggcc ggatgaaccc
     4021 gaaccagcgg cgcgaatgcc tcctcaacca cccaggagaa ctgcgcctgc gggcattgcc
     4081 gccgcgcctc ggtcagcgcc ggcatgtgat ggatcacatc gccgagcgag gaggtcttga
     4141 tgaacagaat gtcgggcatc ttggaagagt ctaccgcttc tgcgcgaccg gtggcggctt
     4201 gtcagcgggc gcgaacgcgt gcattcacgc gtgtgagcgg atgctcacga ctgtgcacgc
     4261 agcaacgcca agcgacatga gcgagcctcc cgcatgactg tcctcgtcac cggcggcgcc
     4321 ggctacatcg gaagccacat ggttcacgca ctcctggatg cgggcgagcg cgtcgtggtg
     4381 ctcgacgatc tcagtaccgg tttcgattgg gcggtagcgc agggcgccca gtttgtcatc
     4441 ggtgacgccg gggaccaagc gctcgtggcg cacttgatgg ccgagcatcg catcgaggcc
     4501 atcgtccatt tcgccgcctc gatcgtggtg cccgactcgg ttcgcaatcc gctcggctat
     4561 tatcacaaca ataccgtgaa ctcgcgcgct ttgatcgagg ctgccgtcaa gggaagcgtg
     4621 cgccatttca tcttctcttc gaccgcggcg gtttatggca atcctgaacg ggtgccgatc
     4681 tgcgaaggcg atgccaccgt gtcgacctcg ccctatggtt catccaagct catgaccgag
     4741 atcatgctgc gcgacgccac cctcgcccac ggcctgcgcc acgtgatctt gcgttatttc
     4801 aacgtcgcgg gcgccgaccc cctcggtcgc gccgggcagt cgaccaaagg cgctacccac
     4861 ctcatcaagg tcgcggtaga ggccgccctc ggcctgcggc caaaagtgga ggtcttcggt
     4921 accgactacc cgacgccgga cggcacctgc atccgggact atattcatgt ctgcgatctc
     4981 gtgcgcgcgc attccgatgc gctggcatat ctgcgcgcgg gcggcgatcc cgtcacgctc
     5041 aattgcggtt atggtcgcgg cttctcggtg ctcgcagtga tcgacgcggt caagcgcatg
     5101 tccggcgcag acttcaaggt ggaactcgcc ggccggcggt tgggagatcc cgcatgggtg
     5161 gtcgcggctt ccgaccgcgc ccgcgctgtg ctcaaatggc agccgcattt cgacgacctg
     5221 gaaagcatcg tgtgccacgc gctggcatgg gagcgcaagc ttttgacgcg cgccagctaa
     5281 tcgtcgattt gcgcttgaaa accgcgacca gctgggcaaa aaggctcgcc tacagcgccg
     5341 ccgcgccggt tgcgccgcta gagatggggc atgctcaaat cgtattggca aagcttgttt
     5401 gcggaccctg acggcgcgcc cgctttggtg cgccgcttgc tcatgcagca ggccgccggc
     5461 caatggcggc gttatgccct cgccttcggt ctgatgggaa tagccgcggc aagcacagcg
     5521 ctcggcgcct atttggtcgg cgacgtgatc aatcaggcct acgttcacaa gaacttgccg
     5581 ggcatcatcg tcctcgccct cgtgaccgcc gtgatcttca tgatcaaggg aatggctact
     5641 tacgggcagg cagtcatgct cgcgcggatc ggcaacggga tcatcgccga caaccagcaa
     5701 cggatgttcg ccaagctgct ccatcataac gtcggttttt ttgccgaccg ccacagctcc
     5761 gagtttatgg cgcggctcaa taccggcgcc gccgcggcga gccaggtgct caacctgctc
     5821 atcaccgcct tcggtcgcga tctgctctcg ctcgtcggac tactggcggt gatggcggtg
     5881 caagacccgg tgctctccgc acttagcatc atcgtggtgc cgccggcgat gctgatcctg
     5941 cgcaagatga ttcgccgcat caagacgatt gcgcaccatc agttcaccgg cagtgcgcgc
     6001 attctcgaaa ccctgcagga gaccctgcag ggcatgcgca ccctcaaggc attcaacctt
     6061 gaagatgcaa tgagcgcccg cttcaattca cgtgttgccg agttggagaa cgagtcgaac
     6121 aaatgggcgc gcgtggccta ccgctcgggt cccctgatgg aggcactcgg cgggtttgcg
     6181 atcgccggcg cactgatcta cgggggcttc cgcgtgatcg agaccggggc aacacccggt
     6241 caattctttt ccttcctggc agccttcatg ctggcctacg agccagccaa acgccttgcg
     6301 cggctcaacc tcgacctcaa cagcggactg gtcggggtgc gaatcctgtt cgacgtgatc
     6361 gaccatccgc cgacggaacc ggatgacgcc ggcatgccgc cgctgcattt gtcgagcgcg
     6421 cgcgtcgaat tcgccaacgt ccagttcgcg taccgtccgg gcgagaaggt catcagaaac
     6481 ctctccttcg tcgccgagcc cggaaaggtc agtgcgttgg tcggcccctc cggcggcggc
     6541 aaatccacga tcctcaattt gatactgcgc ttatatgaag ttaacagcgg cgcgatcgtc
     6601 gtcgacgggc agaatatcgc ggcggtgtca cgccgctcgc tgcgcagcca aatcgcctat
     6661 gtcgggcagg acgttttcct gttccgcggc tcggtgcgcg agaacattgc gctcgggcga
     6721 ttgggtgcga ccgaggccga gatcgtcgcc gccgcgcggg ccgcttacgc gcacgatttc
     6781 atcatggcgt tcccgcgcgg atacgacacg ccggtcgggg aacacgggct gcagctcgcc
     6841 ggcggcgagc gccagcgcat ctccatcgcg cgcgcactgc tcaaggacgc gccgctgatc
     6901 ttgctcgacg aagccaccgc ttcgctcgat tccgaatccg agcggcaggt tcaaggggcg
     6961 atcgaacacc tttgccaggg acgaacgacg atcgtgatcg cgcatcgctt gcataccgtc
     7021 gtggatgccc atcgcatctt cgtcatcgag gatggcgcgg tcgtcgaatc tgggcgtcac
     7081 gacgagttgt tgcgcagagg cggacggtat acctcgttct atcgcctgca actgcgcgag
     7141 caggagccga gcgtaccgcc ggtcgccatc gcatcatccg cttgaagtgc cgataaccgc
     7201 aagagagatc atgcctgccg tcgccgacag ctacgtcatc ccgccgccgc cccgctctgc
     7261 cattgcagtc gccggcagcg acaagacgtt tccggtacgc cgcatctggt gtgtcggccg
     7321 caattatgaa gaacacatcc gcgagatggg ccacgacgtg cgtgacccgc cgttcttctt
     7381 cgccaagccc gctgatgcca tcgtgcccga cggagcgagc gtaccctatc caccgctcac
     7441 caaagacatg catcacgagg tagaacttgt ggtcgcgctc aagtccggcg gccgcaatat
     7501 cccgctcgat cgggcgctcg actgcatcta cggctacggc gttggcatcg acttgacgcg
     7561 gcgcgatctg cagatcgcct cacgcgacat gaagcggccg tgggaaatcg gcaaggcatt
     7621 cgatgcgtcc gcgccctgtg gcccgttgca acccgccagc aagatcggcc accccagcaa
     7681 aggccgcatc gcgctcatgg ccaacggcaa agtgcggcag gacggcgatc tggcacagat
     7741 gatctggaag gtgccggaga tcatcgtgaa gctatcggaa atggtcgagc tcgccgccgg
     7801 cgacatcatc atgaccggaa cgccctccgg cgtggccgcc accgtgtccg gcgacaagct
     7861 cgaatgcgaa atcgagggtg tcggcagact gacggtgacg atcgccccgc cggcggcata
     7921 gggcggcccc gtctcacgat ccgagatagg cgcgtcgcac acggtcgtcg gccaagagcg
     7981 cctcgccggg gccggagagc gtgatccgcc cgttctcgag cacataggcg cgggcggcga
     8041 gcttaagcga gaccgcgaca ttctgctcga caaggacgca ggtgaggcct tcgcgattga
     8101 gatcgcggat cgtgcgcagc agctgctgca ccaccgccgg cgccaacccc agcgacggct
     8161 catcgaacat gacgagttcc ggcgcgccca tgaggcagcg gccgatcgcc agcatctgct
     8221 gctcgccacc cgagagcgtg cccgccggtt gtgccaaacg ttcggcgagc acgggaaaca
     8281 acccgaatac ccgttgcagg tttgcggtcc gcgccgcccg cgcgcgcgga agcatcgcgc
     8341 ccacctcgag gttttctgcg accgacagcc tcggaaatac ctggcggccc tccgccacct
     8401 ggccgatgcc gagattgcaa acccggtggc tttcccatcc ggcgatgtcg atatcgcgaa
     8461 acgcgatgcg tccgcgcgcc gggcgaagca tcccggcaat ggtgcgaatg agcgaggtct
     8521 tgcccgctcc gttcgccccg acgatcgcaa cgatggctcc ttcgtcgatc tcgagggaca
     8581 cgtcgtcgag cgcccgggcg tcaccgtgca agacatcgag gttctcgacc cgcagcatca
     8641 atcgaccgcc tcagcgccga gataggattg caccactgcg ggatcgcgta ccacggcgtc
     8701 tggcgcacct tccgcgatcg gcgcgccgtg gtggagcacc agcacgcgtg cggcgagcgc
     8761 catcaccgcc cgcatgacgt gctcgatgag aaggatggtc aaccctaact cgcggttgag
     8821 ctcgcgcagg atcgagatca tgcggtcggt ctcagccggg cgcaggcccg ccatcacctc
     8881 gtcgagcaac agaagcttcg gatcggtcgc tagcgcgcgc gcaacttcga ggcgcttgcg
     8941 gtccggcagc gtcagcgtgg acgcgagctg atgacgtttg ccgaacagct cgagccgggc
     9001 caacacctcg tgcgcgtggc ggcgcgccga cgccggatcg cgtcggcgca acatcgcgcc
     9061 gatcagcaca ttgtcttcga cggagagcgc ggggaacggt cgcaccaatt gaaaggtgcg
     9121 gccgatgccg cggcgacaga tctcgtcagg cgcaagtccg tcgatgcgtt gcccgccgaa
     9181 tgcgatcgaa ccccgatccg gcgcgaaggc gccggcaata atgttgaaca gcgtggtctt
     9241 gcccgccccg ttcgggccga tgacggcgca gatcgagccc cgcgcgacct ggaagctcac
     9301 gtcgtcgacc gcgagcaacc cgcgaaaccg cttgctgacc ccctcaactg caaggagcgg
     9361 cgtcacgatc gcggccccgt cacgccgagc ttgccggcaa gccaaggcca cacgccaccc
     9421 ggaagcgcca tgaccaccac gagcaggcag agcccataga agacctgttt ggcgccgggc
     9481 gcgtcgaggc ccagggccgt caaaagctcc tgcatcgcct cggacaggcc ggtcagcagc
     9541 agcgcgccca ccagcggccc gaacagggtg ccgatcccgc cgatgatcgg cccaaggatc
     9601 agttcgatcg aacgcgaaat gtgaaacacc tgctccggga acagattgtt gtagtagaac
     9661 gcgaagaacg cgccagccac cgcggtcatg ccgccggaga ggacgatcgc gtacatcttg
     9721 tagcggaacg tatcgatccc gagcgagcgc gcggcgactt cgtcctcgcg gatcgccagc
     9781 cagtaataac cgacccggct cttgagcaga acgtggcaaa gcgcgaatgc tgcgaccgtc
     9841 agcgcgagca tcacgtagta gaacatggtt ggatcgcctc gcagattcca caggtcgttg
     9901 cgcgtgtaat tggcaaccgg caggaagaag ccgctcgacg cgccgaccca gcggaaatga
     9961 tcgaaaccga tgcgcgcgaa ctcagcaaac gcgatggtga gaatcgcgaa atagactccg
    10021 ccgacgccga agcggaacgc gaggaagccg ataacggcgc cgcaggccgc ggcgattgcg
    10081 acgg
//
LOCUS       DATCWM010000569         3386 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_500807, whole genome shotgun sequence.
ACCESSION   DATCWM010000569 DATCWM010000000
VERSION     DATCWM010000569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3386)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3386)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3386
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_500807"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(55..303)
                     /locus_tag="VIQ50_11245"
     CDS             complement(55..303)
                     /locus_tag="VIQ50_11245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361000.1"
                     /translation="MKTGNGQGGLARGERLQIMLSPEELRVVDGFRFQHRMPSRAAAV
                     RELFRLGIAAAGAVVDNAGIKSSDYGVLKAPKNLTKLR"
     gene            1162..2007
                     /locus_tag="VIQ50_11250"
     CDS             1162..2007
                     /locus_tag="VIQ50_11250"
                     /inference="COORDINATES: protein motif:HMM:NF013757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HEY9361001.1"
                     /translation="MLENRRSAEKLTATDPRLKVQRRLSRAAAKPKDTSTLDLALRML
                     DHLAAKGAPIALTAIAQAFGASKSTVYRHLSALARHGFVRRDTNTGRYAIGVKLMVLG
                     ETSRGNFEIVRVAQNSLQRLRDVTGQAVSLCTLLDDDLVVLDLMHGRSVVEFTTRPGT
                     RLALHASAHGKIWLAFGPESLLERVLAAPLKPWTSKTLTDARALESEVMAVRKRGWST
                     APNEAVTGVNTIAAPVLDHRGVLVGSIAIVGSTQVIAPKPRPVQLRAVLEAARSVSRE
                     LGWQR"
     gene            2050..>3386
                     /locus_tag="VIQ50_11255"
     CDS             2050..>3386
                     /locus_tag="VIQ50_11255"
                     /inference="COORDINATES: protein motif:HMM:NF014071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEY9361002.1"
                     /translation="MSYSLAVDIGGTFTDVVLRHSSGVLTVDKVLTTHHDLLEGFFAG
                     VGNALKVAKIGPRDVDGVVVHATTIVTNALIERKGPPTALLVTEGFRDVLHIRNEHRY
                     EMYDPQIEFPDPLVSSELTFGVSERIRADGTVLRSPDRKQVEALASQLKARGVASAAI
                     CFLNSYANPDHERIVGKWLAAALPDVFLTLSSDVAPQIREYPRASTAAVNAYTMPISL
                     PYLRGLSQRLAKEGFPNSPLIMLSSGGVVGAETAGRNPARMIESGPAAGALAGCHYAE
                     VLGISRLMSFDMGGTTAKACLIEDSEPLITGLFEVDRRWRFKEGSGLPVSIPSIDMIE
                     IGAGGGSIARVDALGLLKVGPDSAGSAPGPACYGRGGTSPTVTDADLVLGLLDADNFL
                     GGDMKLDRKASETAISKLGDGLDLTPTQAARGIFRVVTESMAAAVRTHTTDRGV"
BASE COUNT          608 a         1055 c         1041 g          682 t
ORIGIN      
        1 atgtaaaaaa ggcgcaaggc aatccgccaa cggctaagta gtctggccta gtcgttatcg
       61 gagttttgtt agattttttg gtgctttgag cacgccgtag tcgctcgact ttatcccagc
      121 gttgtcgact acggctcccg ccgccgcaat ccccagccga aacagttcgc gtactgccgc
      181 agcccggctg ggcattcggt gctgaaacct gaaaccatcg accactctca gctcctcggg
      241 agacagcata atttgcaggc gttctcccct ggctaaacca ccttgtccgt tgcccgtctt
      301 catgacgaaa accccacaag tcgatattcg gctaaaagat agctacttac tcatttttgt
      361 caagatgaaa ataatgatca attactgttt tttttgcagg atgagaataa tggaacaaag
      421 gatgtgccga tgcgtttgtc cttgatgcaa cttgccgcac gacgtagcga acaccctgat
      481 ttccttacct gccctcgatg caggacgcgg atgccggaag tcgtcgctat cgccccgatg
      541 gggcgccaac cggggctcgt cgcctacgag tgcccaaaat gcgggtatgt gacgagcgtc
      601 ttggcgttaa gcgcgacgag ccacccaacg gctcggcaac ggaaggatgg cgacgctctc
      661 gcttagctca cctcattttc catccgcgca actttcacat attttcagcg ctcggccggg
      721 caatccccgt cagtttcatc gtcgccggcg ccgacgaggt gaccgaggtg gtgctgcttg
      781 cggcggtgca tatgtcgctt cctggcacta cgtgcgccga acgtattgtg cggacatttc
      841 gcggacagcc ggtgcggaga ctgcatcact acccgcggta aatggttgat gctgctggcg
      901 cgcccggcga gattcgaact cacgacctct gccttcggag ggcagccggc tgggcttatc
      961 taatctgtca ggccattgcc ggtttgtgat ccatcgccct gcgccacgct cggtctccct
     1021 gagccgcttc agacccccgc tagatcacca gctaatgctt ttttgctgcg atgcgaaaat
     1081 agcgcttttg cgcgcgactc ggcggcgcag gtggtgtaaa agcgtagcca gtgcgtttcg
     1141 ctattcgaaa cagagtttcg aatgctggaa aatcgtcggt cggcagagaa actaaccgcc
     1201 acggaccctc gactgaaggt gcaacgtcgg ctgtcccgtg ctgctgccaa accgaaggac
     1261 accagcacgc tggacctcgc gctccgcatg ctcgatcatc tggcggccaa aggcgcgccg
     1321 atcgcgctga ccgcgatcgc gcaggcattc ggcgcctcga agtcgacggt ctaccggcac
     1381 ctcagcgcgc ttgctcgtca cgggtttgtt cgtcgcgaca ccaacaccgg gcgttacgca
     1441 atcggcgtga agttgatggt gctgggggaa acctcgcgag ggaatttcga gatcgtcagg
     1501 gtcgcgcaga actcgctgca gcgcctacgc gacgtcactg gacaggcagt gtcgctttgt
     1561 acgctgctcg acgacgatct cgtcgttctg gatctgatgc acggacgctc ggtggtggag
     1621 ttcaccacgc ggccggggac acgtctcgcg ttgcatgcaa gcgcccatgg caagatctgg
     1681 ctcgctttcg ggccggagtc gcttctcgag cgggttctgg cggcaccact gaagccttgg
     1741 acatcgaaaa cactgaccga tgcccgcgcg ctggagagcg aggtcatggc cgtgcggaag
     1801 cgtggctggt cgaccgcccc gaatgaggcg gtgacgggcg tcaatacgat cgcggccccg
     1861 gtgctcgacc atcgaggcgt attggtcggc tcgatcgcca tcgtcggttc gacgcaggtg
     1921 atcgcgccaa agcccaggcc agtgcagctc cgagcggtct tggaggcagc ccggagtgtt
     1981 tcgcgggagc tcggctggca acgataggaa cgtgtgggat ttcgcggtcg tgttcagttg
     2041 gagggcgtgg tgagctattc gctggcagtc gatatcgggg gcacgtttac cgacgtcgtg
     2101 ctgcggcact catccggcgt tttgacggtg gacaaggtgc tgaccactca ccacgacttg
     2161 ctggaaggtt tcttcgccgg cgtcggcaat gcgttgaagg tggccaagat cggcccgcgc
     2221 gacgtcgatg gcgttgtcgt gcacgccacc accattgtca ctaacgcctt gatcgaacgg
     2281 aaggggccgc cgacggcatt gctggtcacc gaaggtttcc gcgatgtcct gcatatccgc
     2341 aacgagcatc gctatgagat gtacgacccg cagatcgagt tccccgatcc gctggtatcg
     2401 tctgagctga cttttggcgt ttccgagcgt atccgcgccg atggtaccgt cctgcgctca
     2461 cccgatcgca aacaggtcga ggcgctggcg tcgcagctga aggcccgcgg ggtcgcctcg
     2521 gccgcgatct gcttcctcaa cagctacgcc aacccggacc acgagcgcat cgtcggcaag
     2581 tggctcgcgg ccgcattgcc cgacgtattc ctcactctgt cgtcggatgt ggcgccacaa
     2641 atccgggaat acccgcgcgc ttcgaccgcg gcggtgaatg cctataccat gccgatctcg
     2701 ctgccctatc tgcgcgggtt aagccaacgc ctcgcgaagg aaggcttccc caactcgccg
     2761 ctgatcatgt tgtcgtcggg cggtgtggtc ggcgctgaaa ccgccggccg caatccggcg
     2821 cggatgatcg agagcggccc tgccgctggg gcgctcgcgg gatgtcacta cgccgaggta
     2881 ctcggcatct cgcggttgat gtcatttgac atgggcggca ctaccgccaa ggcctgcctg
     2941 atcgaagaca gcgagccgct gatcaccggt ctgttcgagg tcgaccggcg ctggcgcttc
     3001 aaggaaggca gcgggctgcc ggtcagcatc ccctcgatcg atatgatcga gatcggcgcg
     3061 ggcggcggca gcattgcccg ggtcgacgcg cttggcctcc tcaaggtcgg ccccgacagc
     3121 gccggctccg ctccggggcc cgcgtgctat ggccgcggcg gcacctcgcc gaccgtcacc
     3181 gatgcggatc tcgtgctcgg cttgctcgac gccgacaact tcctcggcgg cgacatgaag
     3241 ctcgaccgca aggcctccga aaccgcgatc agcaagcttg gcgacgggct tgatctcacg
     3301 ccgacccagg cggcgcgcgg catctttcgc gtcgtcactg aatcaatggc ggccgccgtg
     3361 cgcacccata ccactgatcg cggcgt
//
LOCUS       DATCWM010000570         2376 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_382005, whole genome shotgun sequence.
ACCESSION   DATCWM010000570 DATCWM010000000
VERSION     DATCWM010000570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2376)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2376
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_382005"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..280)
                     /locus_tag="VIQ50_11260"
     CDS             complement(<1..280)
                     /locus_tag="VIQ50_11260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018459744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF167 family protein"
                     /protein_id="HEY9361003.1"
                     /translation="MREPPWRIGADGLLILIRLTPRGGRDAIDGIAQLADGRSVLKVR
                     VRAAASEGEANAALMRFIAAMLRVAPRDVSLLAGTSARLKRLRVAGAGA"
     gene            complement(281..571)
                     /locus_tag="VIQ50_11265"
     CDS             complement(281..571)
                     /locus_tag="VIQ50_11265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003604312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HEY9361004.1"
                     /translation="MNPFLWLIHTLIWLYIYVLIAAAVMSWLLAFNVVNSYNSTVRAI
                     WDFLYRVTEPGLRPIRAILPNLGGIDISPVILIIALMFLDQLIVWLYVQIFA"
     gene            757..832
                     /locus_tag="VIQ50_11270"
     tRNA            757..832
                     /locus_tag="VIQ50_11270"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:790..792,aa:Ala,seq:cgc)
     gene            complement(844..1566)
                     /locus_tag="VIQ50_11275"
     CDS             complement(844..1566)
                     /locus_tag="VIQ50_11275"
                     /inference="COORDINATES: protein motif:HMM:NF005072.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine amidotransferase"
                     /protein_id="HEY9361005.1"
                     /translation="MLPPFLIVLHQETSTPGRIGYALRQRGYALDVRRPRLGDLLPET
                     MASHAGAIIFGGPMSANDTDDFIRREIDWLRVPLKENKPFLGICLGAQMLAHHLGSRV
                     YRHPDGHAEVGYYPIRPTEIGRTVCDPWPEQVYQWHREGFDLPLGADLLAEGDSFPVQ
                     AFRYGGAAFALQFHPDVTHAMMCRWTTRGHERMLLPNAKPRGAHFADRAVYDPAGRAW
                     LAAFLNHLLGTPEVAQQQVSNG"
     gene            complement(1645..2370)
                     /locus_tag="VIQ50_11280"
     CDS             complement(1645..2370)
                     /locus_tag="VIQ50_11280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9361006.1"
                     /translation="MAQEFAAHGHELVLVARREQALDALADAIAGKGAARPTVLPADL
                     GRGDAAQAIAAALERRGLEPDVVVNNAGFGLLGAADTLDRAEQVAMVDVNVRALTELS
                     LAFIDSLKRRRGGILNVASIAAFMPGPGMAVYYASKAYVLSFSEALHRELKPKGVRVT
                     VLCPGPVPTEFQARAGMGDDALPGFLTRSAKQVASDGYRGLMQGRRVVVPGVANRMVT
                     MALRFAPRGLLLELIDRQQLSRR"
BASE COUNT          448 a          761 c          804 g          363 t
ORIGIN      
        1 tcgcgcccgc gccggcgacc cttaggcgct tgagccgcgc gctcgtgcct gcgaggaggc
       61 tgacgtcgcg cggcgcaacg cgaagcatcg cggcgatgaa ccgcatgagc gccgcgttgg
      121 cctcgccctc gctcgccgcc gcgcgcacgc gcaccttgag cacgctgcgt ccgtcggcca
      181 gttgcgcgat gccgtcgatg gcatcgcggc cgccgcgtgg cgtgagccga atgaggatga
      241 gaagaccgtc cgccccgatg cgccaaggag gctcgcgcac tcaggcgaat atctggacat
      301 agagccagac gataagctga tcgagaaaca tgagggcgat gatgagtatc accggcgaga
      361 tgtcgatgcc gccgagattg ggaagaatgg cgcggatcgg ccgcagcccc ggctccgtca
      421 ctcgatagag gaaatcccag atggcgcgga ccgtggaatt gtagctgttg accacgttga
      481 acgcgagcaa ccacgacatc acggccgcgg cgatcagaac atagatgtag agccagatca
      541 gggtatgaat gagccagaga aagggattca tttgggtata ccccgaatgg gcggagcgcg
      601 aatgcccctg gcgaattgca gacgcttgat aagcgcgttg ccgccgtggc gtcaacgcaa
      661 agccttttgc cgcggcggcc gcaatccttg actccttgaa ctgccagccg taaatggcgc
      721 gaactcgcag tcaaccgccg cgcggttgca tctggcgggg ccgtagctca gttgggagag
      781 cgcctcgttc gcaatgagga ggtcaggggt tcgacccccc tcggctccac caccccgtac
      841 cgatcacccg ttcgagacct gctgctgcgc cacttccggc gtccccagca aatgattgag
      901 gaaggccgcc agccaggcgc ggccggcggg gtcatagacg gcacgatcgg cgaagtgcgc
      961 accgcgcggc ttggcgttcg gcaataacat gcgttcatgg ccgcgcgtgg tccaccggca
     1021 catcatggcg tgggtcacgt cgggatggaa ttgcagcgcg aaggcggcgc cgccgtaacg
     1081 gaaggcttgc accgggaagg aatcaccctc cgccagcaag tccgcgccga gcggcaggtc
     1141 gaagccctcg cgatgccact ggtaaacctg ctccggccag ggatcgcaca ccgtgcggcc
     1201 gatctcggtc ggccggatcg ggtagtagcc aacctcagcg tggccgtcgg gatgacgata
     1261 gacccggctg ccgagatggt gcgccagcat ttgcgcgccg aggcagatgc cgagaaatgg
     1321 cttattctct ttgagcggca cgcgcagcca atcgatctcg cggcggatga aatcgtcggt
     1381 atcgttcgcg ctcatggggc cgccgaagat gatggcgccg gcgtggctcg ccatggtctc
     1441 gggcagcaga tcgcccaaac gcggccggcg cacgtcgagc gcatagccgc gctgacgcaa
     1501 ggcataaccg atgcgtccgg gcgtcgaggt ctcctggtgc agtacgatca gaaacggcgg
     1561 gagcataggg cgatcatggc aagcaaagcg ttcgaatctc aataccgact cgagtcggat
     1621 tttcaagatg ccttgccgag atggctagcg gcggctcagt tgctgacggt cgatcagctc
     1681 gagcaatagg ccgcgcggcg caaagcgcag cgccatcgtc accatgcggt tagccacgcc
     1741 cggaaccacc acgcggcggc cctgcatcag cccccggtag ccatcgcttg ccacctgctt
     1801 ggcggagcgc gtgagaaagc cgggtaaggc gtcgtcgccc atgccggcgc gcgcctgaaa
     1861 ctcggtcggc accggacctg ggcacagcac ggtcacgcgc acgcctttcg gcttgagctc
     1921 acggtgaagc gcctcgctga acgagagcac ataggctttg ctggcgtagt agaccgccat
     1981 gccggggccg ggcatgaaag ccgcgatgga ggcgacgttg aggataccgc cgcggcggcg
     2041 tttgagactg tcaatgaagg cgagcgacag ctcggtgagc gcgcgcacat tgacgtcgac
     2101 catggcgacc tgctcggcgc ggtcgagggt atcggcggca ccgaggaggc cgaagcctgc
     2161 attgttgaca accacgtccg gctcgagccc gcgccgctcg agcgcagcgg caatcgcctg
     2221 cgcggcatca ccgcgcccga gatccgcggg cagaaccgtt ggccgcgccg cgcccttccc
     2281 cgcaatggcg tccgccagcg catcaagcgc ctgctcgcgt cgtgcgacca gaacgagctc
     2341 gtggccgtgg gcggcaaatt cttgcgccag cgtcgc
//
LOCUS       DATCWM010000571         2252 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_9531, whole genome shotgun sequence.
ACCESSION   DATCWM010000571 DATCWM010000000
VERSION     DATCWM010000571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2252
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9531"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..785)
                     /locus_tag="VIQ50_11285"
     CDS             complement(<1..785)
                     /locus_tag="VIQ50_11285"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9361007.1"
                     /translation="MITRRQFNATASAALLVPSVTTVGARAAAWPTRVVRIIVPFAAG
                     GPTDVIGRIVGEQLSKTWGQQVVIENRPGGGTNIANELVVHSEPDGHTVLMGGQSQAT
                     TRALYRSLNYDPIGDFAPVAFICGYSFFMFVPNSLPVKSVREFVAYAKANPGKLALAS
                     PGTGSSPHLCGELFKHMAGIEMVHVPYRGAAPAMNDLIPGRVHLLFSGGATLDNARSG
                     QVQVLGYTGAERAAIAPEVPTIAEDGVAGFNVISWYGFFVPAKT"
     gene            complement(896..1885)
                     /locus_tag="VIQ50_11290"
     CDS             complement(896..1885)
                     /locus_tag="VIQ50_11290"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9361008.1"
                     /translation="MIPGPWSPHGLPTAPLAALCVLLATACPCQAQYPERPIRLILPF
                     PAGGAVDHVARLVTARMAEELGRPFVIENKSGAGGVIATDATAKAAADGYTLLLTTPN
                     HTINAALSSKLPYDTEKDLAPVSIIAEVPELLVSHPAAPFADFAGFVAYARNNPGKLN
                     YSSAGNGTLPHVTMELLLRRTGITVAHIPYRGAAPAMTDLLAGQVQLKMDTYATAHQH
                     VAQGKLRALAFASRERSALMPDVPTIAETGLPGYEGILWIGIMAPAATPKSVIEKLAA
                     AGQHAVRNPDLAERLKRDGIEPVGGTAESFAALIAKEIVQWRDLAQSAKITLD"
BASE COUNT          426 a          682 c          722 g          422 t
ORIGIN      
        1 gtcttggccg gcacgaaaaa tccgtaccag gagatcacgt taaacccggc gacaccgtcc
       61 tcggcgatag tcggcacttc gggagcgatg gcggcacgct cggcgccggt gtaaccgaga
      121 acctgcactt ggcccgatct cgcattgtcg agtgtggctc cgccggagaa gaggagatgc
      181 acgcgaccgg gaatgaggtc gttcatcgcc ggggcagcgc cacgatacgg cacatgcacc
      241 atctcgatgc cggccatgtg cttgaacagc tcgccgcaaa ggtgcggtga tgatcctgtg
      301 cccggtgagg cgagcgcgag cttgcccggg tttgccttgg catatgcgac gaactcgcgc
      361 acggacttca ccggaagcga gttcggcacg aacatgaaaa acgaatagcc gcagatgaaa
      421 gcaacgggag caaaatcacc aatgggatcg tagttcagcg aacgatacag agctcgtgtc
      481 gtcgcctgcg actgcccgcc cattaaaacc gtatggccgt caggctccga gtgcacgacc
      541 aactcgttcg cgatatttgt accgccgccc ggtcggttct cgatgacaac ctgttgcccc
      601 caggtcttcg agagctgctc gccgacgatg cgcccgatca catcggtcgg ccctcccgct
      661 gcaaagggca cgatgatgcg cacaacccgg gtaggccacg ccgcggcgcg tgccccaacg
      721 gtggtgacgc tcggaacgag tagggcagcg gacgctgtcg cattgaactg tcggcgcgtg
      781 atcatcacga ttgctctcat agtgacgggt gcgttgcacg ctgtggcgaa agcggacgcc
      841 ggtacggccg gcgcctgggt tagtcaatcg gccgaaaatg tttaggtcgc cgatctcaat
      901 caagcgtgat cttggcggat tgcgcgaggt cgcgccactg cacaatctcc ttcgcgatca
      961 aagcggcgaa gctttcagcg gtgccgccta ccggctcgat cccgtcgcgc ttgagccgct
     1021 cggccagatc agggttgcga accgcgtgtt gaccagccgc ggcgagcttc tcgatcaccg
     1081 acttcggcgt cgccgccgga gccatgatgc cgatccacaa tatgccctcg tagccgggta
     1141 ggcccgtttc cgcgatcgtc ggaacatccg gcatcaatgc cgagcgctcc cggctcgcga
     1201 aggcgagcgc ccgcaacttg ccctgcgcga catgctggtg agcagttgca taggtatcca
     1261 tcttgagctg cacctgtcct gcgagcaggt cggtcatcgc cggcgccgcg ccgcggtagg
     1321 gaatatgggc gacagtgatg ccggtgcgtc gcagcagcaa ttccatcgtt acatgcggca
     1381 gcgtgccgtt gccggcggaa gagtagttga gcttgcctgg attgttcctg gcataggcga
     1441 caaagccggc aaagtcggca aacggcgccg ccggatggct caccagcaat tccggaacct
     1501 cggcgataat cgaaaccggc gcgaggtctt tctcggtatc gtaggggagc ttcgagctga
     1561 gcgcggcatt gatcgtgtgg ttgggtgtcg tcagcaggag cgtgtagccg tcggcggcag
     1621 ccttggcagt agcgtcggtg gcaatgacgc cgccggcgcc ggatttgttc tcgatcacga
     1681 aggggcggcc gagttcttcc gccatgcgcg ccgtcacgag gcgcgccacg tgatcgaccg
     1741 cgccgccggc gggaaacggc agaatgagcc ggatcggtcg ctccggatac tgcgcttggc
     1801 atgggcaggc agtcgccagt aggacgcaaa gcgcggcgag cggcgctgtc ggcaggccat
     1861 gcggagacca cggaccaggt atcattcggc acgtccggaa aggggagggc ttttccgtcg
     1921 ttcgatcaaa atagcttcga ccgtcgtgtc tgcatatcct gcgcaacaca gcgtaaggca
     1981 ataaaggttg tccgcttatt ggggtaaagc gaactcacgg tggaccgttc ccgaatgtct
     2041 gcttatgacc ttcagcggac ataagtgacc gcttcttgct gcgatgcgcg gtgttatgat
     2101 taggtcgtga tccttggcct tggggggtcc catgaggcgg cgggaattca tcacccttgt
     2161 cgatggcgcc gcccattcgc atcccggcaa gcccgacgcc tccccgcaac agtctgcatc
     2221 ctgattccca tggactggct catcctcatt ct
//
LOCUS       DATCWM010000572         2361 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_538423, whole genome shotgun sequence.
ACCESSION   DATCWM010000572 DATCWM010000000
VERSION     DATCWM010000572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2361)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2361)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2361
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_538423"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            226..876
                     /locus_tag="VIQ50_11295"
     CDS             226..876
                     /locus_tag="VIQ50_11295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEY9361009.1"
                     /translation="MATLTIASKNYGSWSLRGWLLCKMAGLDFDERQAPSDDPSTRAE
                     LLLLSPSFLVPCLTHDGVKVWDTLAIAEYVNELKPDANLLPTDRVARAHCRAIAGEMH
                     SGFSNLRSALPMNLKAHYPGFKVWAGAQADIDRVVSIWRECFAVSKGPYLFGKEPCMA
                     DAMYAPVVTRFLTYDVKLDPECVAYCQTIMAMPLMREWVAGAKAEPDELEELDVEF"
     gene            912..2141
                     /locus_tag="VIQ50_11300"
     CDS             912..2141
                     /locus_tag="VIQ50_11300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010684494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9361010.1"
                     /translation="MALDLLLRQGRRAEDKETLVDIAIADGRIVEIAQRIAADAPAED
                     VDGRLVIAGFVESHIHLDKSRILERCHSEHGTLAEAIASVAAAKRSFTEADIYARARH
                     TLEQAIIHGTTRMRTHVEIDPRVGLNGFNAVRGLKRDYAWAIDLQICAFPQEGLTNDP
                     GAEDLLVQACEQGADVIGGCPYTDTDPHRQIARIFAIARRFDLDVDFHLDFDLDPAWM
                     HLDEVCRQTDAHRWGGRATVGHVTKLSAIDHSRLTAIGRRLADCGIAVTVLPATDLFL
                     MGRDREFHVPRGLAPAHRLLAQGVTCSLATNNVLNPFTPFGDCSLIRMANLYANIAQI
                     GRERDLHACFEMITSLPARLMNAADYGIAVGHPADLVVLESRDPASAVAELAQPLFGL
                     KGGRRSFTRAPATLHRP"
BASE COUNT          427 a          802 c          706 g          426 t
ORIGIN      
        1 cgccaacggc aggccaacgg tccgcagggc agcgcccgcc catttgcgaa ccggaatcat
       61 gacgtcggaa tgggcttggt aggcctgata gagcattgtc ccccggcggt cgcgcagccc
      121 tgctgcccgg cagatgtcgc gttcccgctc tcggcacaaa aggtgtagtg catttcattt
      181 tgcagtgcga gatatttgtg gggccgccca acgggaaatc gctctatggc cacgctcact
      241 atcgccagca agaattacgg ctcctggtcc ttgcgcgggt ggctgctttg caaaatggcc
      301 gggctcgact tcgacgaacg gcaggcgccg agcgacgacc cgtccacgcg ggccgaactc
      361 cttctgctct cgccttcgtt cctggtcccc tgtctcaccc atgacggggt caaggtctgg
      421 gataccctgg cgatcgcgga atatgtcaac gagttgaagc ccgacgccaa tctcttgccg
      481 acagaccgcg tcgcgcgtgc ccattgccgc gcgatcgccg gtgaaatgca ctcgggcttc
      541 agtaacctgc ggtcggcgct gccgatgaat ctcaaagccc attaccccgg cttcaaggtc
      601 tgggcgggcg cgcaggccga catcgatcgc gtcgtctcca tttggcgcga atgtttcgcc
      661 gtctccaagg gcccatatct attcgggaaa gagccttgta tggcggacgc catgtacgcg
      721 cccgtcgtca cccgctttct aacttacgac gtgaagctcg atccggagtg tgtcgcctat
      781 tgtcaaacca tcatggcgat gccgctcatg agagaatggg ttgccggcgc caaagccgag
      841 cccgacgaat tggaagagct cgacgtcgag ttctgaccag aagcagatgt catccacgcg
      901 ggtgccgcgc catggccctc gatctcctct tgcgtcaggg cagacgggcc gaggacaagg
      961 agacgcttgt cgacatcgcc atcgccgacg gccgcatcgt cgagatcgcg cagcgaatcg
     1021 ccgccgacgc gccggccgag gacgtcgacg gccgcctcgt gatcgcaggc ttcgtcgaga
     1081 gccacattca tctcgacaaa tcccgcatcc tcgagcgctg ccacagcgag cacggcacgc
     1141 tcgcggaagc gatcgcatcg gtagcggccg cgaagcgctc cttcacagag gccgacatct
     1201 acgcacgcgc ccggcacacg ctggagcaag ccatcatcca tggcacgacc cgcatgcgca
     1261 cccacgtcga aatcgacccg cgcgtggggc tcaacggttt caacgcggtg cgcgggctca
     1321 aacgcgatta tgcgtgggca atcgacttgc aaatctgcgc atttcctcag gagggcctca
     1381 ccaacgatcc cggcgccgag gacctgttgg tgcaagcctg cgagcaaggc gccgacgtga
     1441 tcggcggttg cccctacacc gatactgacc cacaccggca gatcgcgcgc attttcgcca
     1501 tcgctcgccg tttcgatctc gacgtcgatt tccacttgga tttcgacctc gaccctgcgt
     1561 ggatgcatct cgatgaggta tgccgccaga ccgatgccca tcgctggggc ggccgggcaa
     1621 cggtcggcca tgtcaccaag ctttccgcga tcgaccattc ccgtctcacc gcgatcggcc
     1681 ggcggttggc cgattgcggc atcgctgtga cggtgctgcc ggcaaccgac ttgttcctga
     1741 tggggcgtga ccgtgaattc catgtgccgc gcggcctcgc gccggcgcat cggctgcttg
     1801 cacagggggt gacctgttcg ctcgccacca acaacgtgct caacccgttt acgccattcg
     1861 gcgattgctc gctgatccgg atggcgaacc tctacgccaa cattgcccag atcggccgtg
     1921 agcgcgatct gcacgcgtgt ttcgagatga tcacgagcct gccggcgcgg ctgatgaatg
     1981 cggccgatta cgggatcgcg gtcggccatc ccgccgatct cgtcgttctc gagagccgcg
     2041 acccggcgag cgcggtagcc gagctggcgc agcctttatt cggcctcaag ggcggacgcc
     2101 gcagcttcac ccgcgccccc gccactctgc atcgtccgta accgcgcaac ctcgaacggc
     2161 aaagattgcg cctcgccggc attgcccaaa gcgtgggcgc aacgcgcata caatgtgcag
     2221 cacgcgcgcc gacctgcccg gtaggacccc tcgcatatgc ccaaacggtt gaaatcaatg
     2281 aaatcagccg cccggcgcgg atggcacgct ccttgaaatg gtctgcgcca cgtccccatc
     2341 gacgacgatg gcgagccgcc c
//
LOCUS       DATCWM010000573         2058 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_9549, whole genome shotgun sequence.
ACCESSION   DATCWM010000573 DATCWM010000000
VERSION     DATCWM010000573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2058
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9549"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..711)
                     /locus_tag="VIQ50_11305"
     CDS             complement(<1..711)
                     /locus_tag="VIQ50_11305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia channel protein"
                     /protein_id="HEY9361011.1"
                     /translation="MACGFAAALSLDFAALPALAQETASRIDGADTAWMIAATALVLM
                     MTIPGLALFYCGMVRKKNVLATMAQSVACTALCSLLWFAIGYTLSFIGDAPWLGTFGR
                     LFLRGIDMEATSAFAPTIPELLYVVYQMAFTIFTVALIAGAVADRMRFSAFLWFAAGW
                     LIFVYVPIVHWVWGGGFLASAGALDFAGGTVVQLNAGVAGLIAAYVLGKRHGYGSDNF
                     APHDLSLAVIGMGMLWIGW"
     gene            complement(761..1099)
                     /locus_tag="VIQ50_11310"
     CDS             complement(761..1099)
                     /locus_tag="VIQ50_11310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018701003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEY9361012.1"
                     /translation="MKLIIAIIKPFKLEDVRDALVAVGVQGMTASEVKGYGRQKGHTE
                     IYRGAEYAVNFLPKIRIEVAVPTDRVAAVVEAIIASAKTGQIGDGKIFVTAIDQAVRI
                     RTGETDADAL"
     gene            complement(1202..>2058)
                     /gene="tesB"
                     /locus_tag="VIQ50_11315"
     CDS             complement(1202..>2058)
                     /gene="tesB"
                     /locus_tag="VIQ50_11315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA];
                     GO_process: GO:0006637 - acyl-CoA metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA thioesterase II"
                     /protein_id="HEY9361013.1"
                     /translation="DLLAILDLEQLELNLFRGRSPQVGWQRVFGGQVIGQALVAACRT
                     VDVAGRPPHSLHAYFLLPGDPKVPIIYEVDRIRDGASFTTRRVVAIQHGQAIFTMAVS
                     FHRDEPGMSHQARVPEVAKPEQLPNEADIKERVLPLMPDPVRRYYERERPIEWRPVEL
                     DRYLGKKIENGRFHVWIRATAKLPDEPAIHQCVLAYASDMLLLDSALIPHGRTVFEKT
                     LMAASLDHALWFHRPFRADEWLLYAHDSPNLAGSRGLSRGLIFARDGTLVASVAQEGL
                     LRERSLSP"
BASE COUNT          392 a          658 c          665 g          343 t
ORIGIN      
        1 ccagccgatc cacagcatgc ccatgccgat gaccgccaac gacagatcgt ggggcgcgaa
       61 gttgtcgctg ccgtagccgt ggcgcttgcc gagcacataa gcggcgatca ggccggcaac
      121 gccggcgttg agttggacga cggtgccgcc ggcaaaatcg agagcgccgg cgctcgcgag
      181 aaagccgccg ccccacaccc aatgcacgat cggcacatag acgaagatca gccatcccgc
      241 ggcaaaccac aaaaacgcgg aaaaccgcat gcggtccgcg accgcgccgg cgatcagcgc
      301 caccgtgaag atcgtaaacg ccatctgata gacgacgtac aacagctccg ggattgtcgg
      361 cgcgaacgcg ctcgtcgcct ccatgtcgat gccgcgcagg aaaagccgcc cgaaggttcc
      421 gagccaaggc gcatcaccga tgaagctcag ggtgtagccg atcgcaaacc acaagagcga
      481 acagagcgcg gtgcaagcga cgctctgcgc catggtggcg agcacgttct tcttgcgaac
      541 catcccgcaa tagaacagcg ccaagcccgg gatcgtcatc atcagcacga gcgcggtcgc
      601 ggcgatcatc caggcggtgt cggcgccgtc gatcctcgag gccgtttcct gcgccagcgc
      661 cggcaaagcc gcaaagtcca agctcagtgc ggcggcgaaa ccgcacgcca tgcgtgtcgt
      721 ggctcttctc atgctgtccc ccctctatgc gtttaggctt ttacaaggcg tcggcgtcgg
      781 tctcgccggt gcggatgcgc acggcttgat cgatggcggt gacgaagatc ttgccgtcgc
      841 cgatctggcc ggtcttggcg gacgcgatga tggcttcgac gacggctgcc acgcgatcgg
      901 tcggcaccgc cacctcgata cggatcttcg gcaggaaatt cacggcatat tcggcgccgc
      961 ggtagatctc ggtgtgtccc ttctggcggc cgtagccttt gacttcgctt gctgtcatgc
     1021 cctgcacgcc gaccgccacc aacgcgtcgc gcacgtcctc gagcttgaat ggcttgatga
     1081 ttgcgatgat gagcttcatg aagtcgcccc gcgagtgact gcgcacgata tcggcacgag
     1141 agcgaaagat taagcgatta gctccgtcat tcgtaccgcc tctagtgcag catagctgac
     1201 cttagggaga aaggctgcgc tcgcgcagca atccttcctg ggcgaccgag gccaccagcg
     1261 ttccatccct ggcgaagatg agcccgcggg agaggccgcg cgaacccgcc agattggggc
     1321 tgtcgtgggc gtaaaggagc cattcgtcgg cgcgaaacgg acggtgaaac caaagcgcgt
     1381 ggtcgagact tgcagccatc agggtttttt cgaacacggt gcgcccgtgc gggatcaacg
     1441 ccgagtccag cagcagcatg tcggatgcat aggcgagcac gcattgatgg atcgcgggct
     1501 catcgggaag cttcgcagtg gcgcggatcc agacatggaa gcggccgttc tcgatctttt
     1561 tgccgagata gcggtcgagc tccaccggtc gccattcgat cggccgctcg cgctcgtagt
     1621 agcggcgcac cggatcgggc atcagcggca gcacgcgctc cttgatgtcg gcttcgttcg
     1681 gcagctgctc cggcttcgcc acctccggga ccctcgcctg gtggctcatg ccgggctcgt
     1741 cgcgatgaaa cgacaccgcc atggtgaaaa tcgcctgtcc gtgctggatg gcgacgacgc
     1801 ggcgggtggt gaagctcgcg ccgtcgcgga tgcggtcgac ctcgtagatg atcggcacct
     1861 tggggtcgcc ggggagcagg aaataggcgt gcagcgagtg tggcggccgc ccggcgacgt
     1921 ccaccgtgcg gcaggcggcg accagcgcct gcccgatcac ctgcccgccg aacacgcgct
     1981 gccaaccgac ctgcggcgag cgcccacgga acaggtttag ctcgagttgc tcgagatcga
     2041 ggatggcgag gagatctt
//
LOCUS       DATCWM010000574         2134 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_300979, whole genome shotgun sequence.
ACCESSION   DATCWM010000574 DATCWM010000000
VERSION     DATCWM010000574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2134
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_300979"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..949)
                     /locus_tag="VIQ50_11320"
     CDS             complement(<1..949)
                     /locus_tag="VIQ50_11320"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9361014.1"
                     /translation="MRELWIAGGLLWLAGVALRLSILAVPPVIALIQSDLRLSGTEVG
                     ILSGLPMILFAMAALPGSLFIARLGALPTLVAGLLIAGVASALRGAMRDIFALYAATV
                     VMSAGIAIMQPALPPLVRQWLPRHVGLGTALFTNGLLVGETLPVMVTIPFVLPLVDGS
                     WRAALAIWALPLVLIALVTAVLAPVPKQSAGSAPATGRNWWPDWRNPLTWQIGILLGS
                     VNGVYFAANTFLPGYLTDAGRPDLIGAALTALNFGQLPASFALLATVDRFVRRPVPFM
                     VCGALFLVCLAGMATTASLWTVICAGALGFIGAVVFVLAL"
     gene            complement(1179..>2134)
                     /locus_tag="VIQ50_11325"
     CDS             complement(1179..>2134)
                     /locus_tag="VIQ50_11325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HEY9361015.1"
                     /translation="STQRVEGYRNFATKLWNACRFAEMNRCVTVAGFDPKSAKATLNR
                     WIAHETGKAAREITEAIELYKFNDAAGAAYRFVWNIFCDWYLELAKPVLQGADERAKD
                     ETRAMTAWVRDEILKVLHPFTPFVTEELWQLTAQDGAARDNLLALAPWPKLEGLDDLE
                     AEAEIGWVIDLVTAIRSVRAEMNIAPATEIPLVLAASPATQVRGVRWGETVRRLARLS
                     DIARAERAPQGAVQLIVRGEVAALPLKGVIDFSAEKARLEKEMVRVSSDIARIDAKLA
                     NADFVARAPEDVVEGEREKREEAEARRLKINEALERLKGAA"
BASE COUNT          378 a          737 c          703 g          316 t
ORIGIN      
        1 caagcgccag cacgaacacc acggcgccga tgaagcccag cgcgccggcg cagatgacgg
       61 tccacaagct cgccgttgtc gccatgcccg ccaagcacac caggaagagc gccccgcaga
      121 ccatgaaggg caccgggcgc cgcacgaacc tgtccacggt cgcaagcagc gcaaacgagg
      181 cggggagttg gccgaagttg agcgcggtca gcgcggcgcc gatcaagtcg ggccgcccgg
      241 cgtcagtgag ataaccgggc aggaacgtat tggcggcgaa gtacacgccg ttgacgctgc
      301 cgagcagaat gccgatttgc caggtcagag gattgcgcca gtcgggccac cagttgcgcc
      361 ctgtcgccgg cgcgctcccg gccgactgct tgggcaccgg cgccagcacc gcggtcacaa
      421 gcgcgatcag caccagcggc agagcccaga tcgccagcgc cgcgcgccac gagccgtcga
      481 cgagcggcag cacgaacggg atcgtcacca tgaccggcag cgtttcaccc acgagcaatc
      541 cattggtgaa gagcgcggtg ccgaggccca cgtgtcgcgg cagccattgg cgaacgagcg
      601 ggggcagcgc gggctgcatg atggcgatgc ccgcgctcat gacgacggtc gcagcataga
      661 gtgcgaatat atcgcgcatg gcgccgcgca gcgccgaggc gacgccggcg atgagcaggc
      721 ccgcgaccag cgtcggcagc gcgcccagac gggcaatgaa gagcgacccc ggcagcgccg
      781 ccatcgcgaa tagaatcatg ggcaggccgg agaggatgcc gacctcggtg ccggagaggc
      841 gcaggtcgga ctggatcagc gcaatgaccg gcgggacggc gaggatgctc agccgcagcg
      901 ccaccccggc gagccagagc aggccgccgg caatccaaag ttcacgcatg gcactcccgg
      961 cggtcggttc tttcagctgg tcatgcgcgg gcagaagcgc gtcgcagacg cgcgtgaacg
     1021 cgcttgtgac ccgcgcatcc atctccttgg caaaaattct ttacgaacct agatggattg
     1081 caccgcaact cgggcttgcc cgagttgcgc cgtgttatgc gccgcaagtc gggtaaaccc
     1141 gacttgcggt gtcaagcccg gcaatgacga cctttttgtc acgcggcgcc tttcaggcgc
     1201 tcgagcgctt cgttgatctt gagccgccgc gcctcggctt cttcgcgttt ctcgcgctcg
     1261 ccctcgacca cgtcctccgg cgcgcgagcg acgaagtcgg cattggccag cttggcatcg
     1321 atgcgggcga tgtcggaact gacccgcacc atctctttct caaggcgcgc tttctcggcg
     1381 gaaaaatcga tgacgccctt gagcggcagc gccgcgacct ccccgcgcac gatcaattgc
     1441 accgcgccct gaggagcgcg ctccgcacgc gcgatatcgg agaggcgcgc gagccgccgc
     1501 acggtctcgc cccagcgcac ccccctcacc tgcgtcgccg gcgatgccgc cagcaccagc
     1561 ggaatctcgg tcgccggcgc gatgttcatt tccgcgcgca cggaacggat ggcggtcacg
     1621 aggtcgatga cccagccgat ctccgcctcg gcttcgaggt cgtcgagccc ctcgagcttc
     1681 ggccacggcg caagcgcgag caaattgtcg cgggcggcgc cgtcctgcgc cgtcagttgc
     1741 cagagctctt cggtgacgaa cggcgtaaag ggatgcagga ccttgaggat ctcgtcgcgg
     1801 acccaggccg tcatcgcgcg cgtctcgtcc ttggcgcgct catcggcgcc ctgcagcacc
     1861 ggcttggcca gctccagata ccagtcgcag aagatattcc acacgaaccg gtaggccgcc
     1921 cccgccgcgt cgttgaactt gtagagctcg atcgcctcgg tgatttcgcg cgcggctttg
     1981 ccggtctcgt gcgcgatcca gcggttgagc gtcgccttcg ccgatttagg gtcgaacccc
     2041 gccaccgtca cgcagcggtt catctccgcg aagcggcagg cgttccacag cttggtcgcg
     2101 aagttgcggt agccctccac gcgctgggtg gaaa
//
LOCUS       DATCWM010000575         2113 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_392585, whole genome shotgun sequence.
ACCESSION   DATCWM010000575 DATCWM010000000
VERSION     DATCWM010000575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2113
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_392585"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..498
                     /locus_tag="VIQ50_11330"
     CDS             <1..498
                     /locus_tag="VIQ50_11330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017483701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HEY9361016.1"
                     /translation="FRALWRELLQPAIDAPPTWVLRDFHSPNLIWLPQRRGLARLGLL
                     DFQDAVMGSPAYDLASLLQDARVDVSEQIELALLGRYVRGRGGHQADFDAAQFIKVYA
                     TLAAQRASKILGIFARLDLRDGKPQYLRHLPRVWGYLQRSLSHPALEALNAWYIAHVP
                     SLNTI"
     gene            541..1263
                     /locus_tag="VIQ50_11335"
     CDS             541..1263
                     /locus_tag="VIQ50_11335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEY9361017.1"
                     /translation="MTTAPKRAMVLAAGLGTRMRPFNGQLPKPLVRVGGKTLIDYVLD
                     RLAAQGVERAVVNVHHLADQIEHHLAQRRQPKIVISDERSELLGTGGGVVKALPQLGD
                     APFFHVNSDTIWIDGVKPNLARLAEAFDGARMDALLLLAPAASSTGYSGRGDFSMGAD
                     GGLMRRGEREVVPFVYAGAAILTPAFFAGAPPGAFSMSPLFDRAADAGRLCGLRLEGV
                     WMHVGTPEAIQAAEKALLTAAV"
     gene            1417..>2113
                     /locus_tag="VIQ50_11340"
     CDS             1417..>2113
                     /locus_tag="VIQ50_11340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="double-strand break repair protein AddB"
                     /protein_id="HEY9361018.1"
                     /translation="MVARPKVFTIPSSVPFVPTLVHALVDGTLVPGFPPAHATLALAD
                     ATLYLPTRRACRLARDFFLEATNEDAAILPRIIAIGDIDEDEIAFADAAGALASEALE
                     LPPALGGLERRLLLTRLVLKWAASIAPDQHGEAPLVANNPASALALADDLARLMDDMI
                     TRGVPWERLDRLVPEALDRYWQLTLQFLQIAREAWPKILAERGAIEPAARRDALIKAE
                     AVRLAAHGDGPVVA"
BASE COUNT          345 a          733 c          658 g          377 t
ORIGIN      
        1 ttccgcgcgc tctggcgcga actgttgcaa ccggcaatcg atgcgccgcc gacctgggtg
       61 ctacgcgact tccattcccc caacctgatc tggctaccgc aacgccgtgg gctcgcccgc
      121 ctcggtctgc tcgacttcca agacgcggtg atgggctcac ccgcctacga tctcgcctca
      181 ctgttgcagg atgcgcgtgt cgacgtctca gaacagatcg aactcgcgct gctcggccgc
      241 tacgtgcggg gacgcggcgg tcaccaggcc gatttcgatg ccgcccaatt catcaaggtc
      301 tacgccacgc tcgccgccca gcgcgcgagc aagatcctcg gcatcttcgc ccgcctcgac
      361 ctgcgcgacg gcaaaccgca atacctgcgg cacctgcccc gggtctgggg ctatttgcag
      421 cgctccctga gccatccggc gctggaagcg ctcaacgcct ggtatattgc ccacgtgccg
      481 tcgttaaata caatttaagc gcgaccgggc agaaccccat tgatggccga aacgcgccga
      541 atgacaaccg cgccgaaacg cgccatggtc ctggcggcgg ggctgggtac gcgcatgcgt
      601 cccttcaacg gacagttgcc caaacccctc gttcgggtcg gcggcaagac gctcattgac
      661 tacgtgctgg atcgcctcgc cgcgcaggga gtcgagcgtg cggtggtcaa cgtgcatcat
      721 ctggccgatc agatcgagca ccaccttgcg caacgccggc agccgaagat cgtcatttcc
      781 gacgaacgaa gcgagcttct cggcaccggc ggcggcgtgg tcaaggcact cccccagctg
      841 ggcgacgctc cgttcttcca tgtcaattcc gatacgatct ggattgatgg cgtaaaaccc
      901 aacctcgccc ggctcgccga agccttcgat ggcgcccgca tggacgcgct gctcttactc
      961 gcgcccgcgg cgtccagtac tggctatagc gggcgcggcg atttctcgat gggggccgac
     1021 ggcgggctta tgcggcgcgg tgagcgcgag gtggttccgt tcgtctacgc cggtgccgcg
     1081 atcctgacgc ccgccttctt cgcgggtgcg ccgcctggag cattctccat gtcgcccttg
     1141 ttcgaccgcg cggccgacgc cggccggctc tgtgggctgc ggctcgaagg cgtctggatg
     1201 catgtcggca cgcccgaggc cattcaagct gccgagaagg cgctcctcac cgccgcggtc
     1261 tagcctcggt ccatcccaaa attgattgtg tcatcgttcg cgaaggcgga tgatccagta
     1321 atctccttgc ccacgaatcg atcgccagcg tggcggtgac tggatgcgcg ccgcaaacac
     1381 atgcgcgacg cgcaggcatg acaagccaat tgcacaatgg ttgctcgtcc aaaggtgttc
     1441 accattccct cctcggtgcc gttcgtgccg acgctcgtcc acgcgctggt cgatggaacc
     1501 ctcgtgccgg gctttcctcc ggcgcacgcg acgctcgcgc ttgcggacgc cacgctctac
     1561 ctgccgacgc ggcgtgcctg ccggctcgcg cgcgactttt tcctcgaggc gaccaacgag
     1621 gacgcggcga tcctgccgcg gatcatcgcg attggcgaca tcgatgagga cgagatcgcg
     1681 ttcgccgacg cagcaggagc actggccagc gaggcgctcg aattgccacc ggcgctcggc
     1741 ggccttgagc ggcgcctact gctcacgcgg ttggtgctca aatgggcggc aagcattgca
     1801 cccgatcagc acggcgaggc accgctcgtc gccaataatc ctgcctcggc actcgcgctt
     1861 gccgatgacc tcgcgcgcct gatggacgac atgatcacgc gcggcgtacc ctgggagcgg
     1921 ttggatcggc tcgtacccga agcgctcgac cgttactggc agctcacgct gcaattcctg
     1981 cagattgcgc gtgaagcttg gccgaaaatc ctcgccgaac gaggggccat cgagcctgcc
     2041 gcgcgccgcg atgcgctgat caaggcggaa gcggtacggc tcgctgcgca tggcgacgga
     2101 ccggtggtcg ccg
//
LOCUS       DATCWM010000576         2130 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_14913, whole genome shotgun sequence.
ACCESSION   DATCWM010000576 DATCWM010000000
VERSION     DATCWM010000576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2130
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14913"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            311..586
                     /locus_tag="VIQ50_11345"
     CDS             311..586
                     /locus_tag="VIQ50_11345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1153 domain-containing protein"
                     /protein_id="HEY9361019.1"
                     /translation="MSEPLRPRAKYVIGPDGSPLTIADLPAPGTKRWVIRRKAEVVAA
                     VRGGLLSLEEACSRYTLTVEEFLSWQYSIDQHGLAGLRTTRIQQYRQ"
     gene            complement(492..872)
                     /locus_tag="VIQ50_11350"
     CDS             complement(492..872)
                     /locus_tag="VIQ50_11350"
                     /inference="COORDINATES: protein motif:HMM:NF022596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2905 domain-containing protein"
                     /protein_id="HEY9361020.1"
                     /translation="MRSDETSTAGGAMARFLIVLGLAILLMGLLWPYLSKLGLGRLPG
                     DIVIERENVTLYIPLATCLMLSLVLSLILWVATGNGRAIEARHASTTDAVAITAGTAG
                     CGWCEARQARVGRSNTARRGIPRP"
     gene            898..1599
                     /locus_tag="VIQ50_11355"
     CDS             898..1599
                     /locus_tag="VIQ50_11355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011090624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9361021.1"
                     /translation="MTDVKFNSALIVGAGSGLSASLARALAREGIKVALASRSTGDLE
                     ALVKETGARAFSCDAAERAQVEKLFAEVEASNGTPDIVIYNASFRTRGPFVELDPLDV
                     EKSLAVTAYGAFLVAQQAARRMLPKKHGAILLTGASAGVKGYPQSAPFAMGKFALRGL
                     AQSMARELSPQGIHVAHVVVDGGIRSAHRPDPSDKPDSTLDPDAIAESYMHLIYQPRS
                     AWAWEIELRPWVEKF"
     gene            1633..>2130
                     /locus_tag="VIQ50_11360"
     CDS             1633..>2130
                     /locus_tag="VIQ50_11360"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: protein motif:HMM:NF014593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HEY9361022.1"
                     /translation="MAAKVTIPALLQMKREGQKIVGVVAWDYQIARIADRAGVDIVSV
                     GDSVGVNLWGHANPLEVTMDEMLVVCKAVRRGVTRALVSCDFPFGPLQEGSESALRAA
                     IRLVKEGGADMVKLDGAADFPETVRELTRAGIPVFAQFGITPQTALRYGIPYGAQSAP
                     RAQAPP"
BASE COUNT          372 a          702 c          714 g          342 t
ORIGIN      
        1 ccgtgtcgag ggccgggagg aggccgcacg cccggccggg acgtgcagca ctctgcgccc
       61 tcgttcgccg tggcgcgccg cctacgcgcg gacggcgacc acggttggac gggctcctcg
      121 agcaaatcac tggacggcca agcttttttc cagacccccc ggcgggccat cggaggcatt
      181 tgccggccgc aaccgctcga ggctgcctgg cggcagcaat gcggccggat cgaggggaac
      241 ttagccaaat cttaagtgcc ggcccgttac attccgcctg atctgcagtg gattgcgtgt
      301 gagatcattg atgagcgagc cccttcgacc gcgggccaaa tacgtcatcg ggcctgatgg
      361 cagcccgctg accatcgccg atttgccggc accgggcacc aagcgctggg tcatccggcg
      421 caaagccgag gtcgtcgccg ccgtgcgcgg gggcctgctg tcgctcgagg aagcctgcag
      481 ccgctacacg cttacggtcg aggaattcct ctcctggcag tattcgatcg accaacacgg
      541 gcttgccggg cttcgcacca cccgcatcca gcagtaccgg cagtaatcgc gaccgcgtcg
      601 gtcgttgagg cgtgacgggc ctcgattgcg cgcccattac cggttgcgac ccagagtatg
      661 aggctcagca ccaagctgag catcaggcac gtcgctagcg ggatatagag cgtaacgttt
      721 tcccgctcga taacgatgtc gccgggcaag cggccgagcc cgagcttgct caggtagggc
      781 cacagcaggc ccatgagcag gattgcaagt ccgagcacga tcagaaagcg cgccatcgct
      841 ccacctgccg tgctagtttc atcgcttcgc atctaggagc acgaaccgga tttcgccatg
      901 acggatgtca aattcaattc cgcgctcatc gtgggcgcag gctctgggct aagcgcctcg
      961 ctcgcgcgcg cgctcgccag ggagggaatc aaggtggcgc tcgcgtcgcg cagcaccggc
     1021 gacctcgaag cgctcgtcaa ggagaccggc gcgcgcgcgt tctcctgcga cgcggccgag
     1081 cgcgcccagg tcgagaagct attcgcagag gtcgaagcgt cgaacggcac gcccgacatc
     1141 gtgatctaca acgcgagctt ccgcactcgc ggcccgttcg tcgagctcga tccgctcgac
     1201 gtggagaaat cgctggcggt gacggcctac ggcgctttcc tcgttgcgca gcaggcggcg
     1261 cggcgcatgc tgccgaagaa gcacggcgcg atcctgctca ccggcgcgtc ggccggcgtg
     1321 aagggctatc cgcaatcggc gcctttcgcc atgggcaagt tcgcgctgcg gggattggcg
     1381 caaagcatgg cacgcgagct ttcgccgcaa ggcatccatg tcgcccacgt ggtggtcgac
     1441 ggcggcatta ggagcgcgca ccggccggac ccgtccgaca agcctgacag cacgctcgat
     1501 cccgacgcca tcgccgagag ctacatgcac ctcatttatc agccccgcag cgcctgggca
     1561 tgggagatcg agctgcggcc gtgggtggag aaattctgac ggccggtgag cgacccgaac
     1621 aatgaggcga gcatggccgc caaggtgacc attcccgcgc tgctgcagat gaagcgcgag
     1681 ggccaaaaga tcgtaggcgt ggtcgcctgg gattatcaga tcgcgcgcat cgcagatcgc
     1741 gccggcgtgg acatcgtctc ggtgggagac tcggtcggcg tcaatctgtg gggccacgcc
     1801 aatccgctcg aagtcaccat ggatgagatg ctcgtagtct gcaaggcagt gcgccgcggt
     1861 gtgacgcgcg cgctggtgag ctgcgacttt ccgttcggtc cgttgcagga ggggagcgag
     1921 agcgcgctgc gcgccgccat acgcctggtc aaggaaggcg gcgcggacat ggtcaagctc
     1981 gacggcgcgg ccgatttccc cgagacggtg cgcgagctca cccgcgccgg catcccggtc
     2041 ttcgcgcagt tcgggatcac gccacaaacg gcgctgcgat acggcattcc ttacggcgcc
     2101 cagtccgcgc ccagggcgca ggcgccgccg
//
LOCUS       DATCWM010000577         2910 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_328254, whole genome shotgun sequence.
ACCESSION   DATCWM010000577 DATCWM010000000
VERSION     DATCWM010000577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2910)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2910)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2910
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_328254"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(53..661)
                     /locus_tag="VIQ50_11365"
     CDS             complement(53..661)
                     /locus_tag="VIQ50_11365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012041027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY9361023.1"
                     /translation="MQNQYVLRDVASPHFKAPAQDTSDEALIDLIADGDKRAMQVLYA
                     RHNVRVYRFILRLTGNQSLAEDLVSEVFLDVWRQAEAFESKSQVSTWLLAIARYKALS
                     ALRRRTDEHLDDHMAATIEDTADSPETMVHNKDRSIIVRKCLTQLSPAHREVIDLVYY
                     HEKSVDEVARIVGVPAATVKTRMFYARSKMADLLKQSGVHAF"
     gene            complement(841..1593)
                     /locus_tag="VIQ50_11370"
     CDS             complement(841..1593)
                     /locus_tag="VIQ50_11370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY9361024.1"
                     /translation="MTQAQHIIVVDDEQPAREMVGDYLRMHGFSVSLCDGGDSLRKTI
                     AQQVPDLIVLDLNMPEEDGLSIIRDLKRRTSVPIIMLTATASAIDRVVGLELGADDYL
                     AKPCELRELLARVRSVLRRSSAVQPVAQPAAAGPQAAPASARVRFGTKWLDHDAQALR
                     DDEGNEHPLTASEYGLLKVFAANPKRVLARDRLLELANARDAEAFDRAIDLRIMRIRR
                     KIEPDPARPSVIRTVRGGGYLFSPTGEAPALD"
     gene            complement(1590..>2910)
                     /locus_tag="VIQ50_11375"
     CDS             complement(1590..>2910)
                     /locus_tag="VIQ50_11375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3369 domain-containing protein"
                     /protein_id="HEY9361025.1"
                     /translation="ADKLFTSLTAALRSYQQLQRMVETRRGLEIIIEAASTLFDFKSM
                     QRLAEGVLTQIGSLLNVECAGILVLREAQNARETFSVLAGSGCYSRFIGTDVSQILEH
                     DLRQLVQEAFARRHHEFSPRRSVLYIRTVSGREVVVVLEAARRLSSTDRTLVEIFCSR
                     LSIAFDNVILYEQLQRANTRLEERVAARTQDLTTANRRLTAQWARLRQANTFKSEILG
                     TVAHDLKNPLGVILGRTEILREMIAGAGALDENVKVQLGHIRDAANRLTEMVDDLVAD
                     AMADALDITIRREPVDISLLVEEVAEANRPLAARKEQTITVAAPPNHAAICDADRIRE
                     AIDNLVSNAVKYSPIGGAIDLLVAQEEGGILVQVSDQGAGLSPEDISRLFGRFQRLSA
                     KPTAGETSTGLGLSIVKRIVDLHGGQITVESAGPGKGATFKMVLPVT"
BASE COUNT          498 a          899 c          948 g          565 t
ORIGIN      
        1 catggacatt aagcaggagg gcgatcgtcc gagggaactg cggacgccgc gatcagaatg
       61 cgtgcacccc cgactgcttg agaaggtcgg ccatcttgct ccgcgcatag aacatgcggg
      121 tcttcactgt cgctgccggc accccgacga tccgcgcgac ttcgtcgacc gacttctcgt
      181 gatagtaaac gaggtcgatg acttcgcggt gcgccggcga gagctgcgtc aggcacttcc
      241 ggacgatgat gctacggtcc ttgttgtgca ccatggtctc aggactatcg gcggtatcct
      301 cgatggtcgc cgccatgtga tcgtccaagt gctcgtcggt gcggcgccgc agggcggaga
      361 gcgccttgta gcgcgcgatc gcgagcaacc aggtggacac ctgggatttc gattcgaacg
      421 cctcggcctg ccgccagaca tcgaggaaca cctcgctcac gaggtcctcg gccagcgact
      481 ggttgcccgt caggcggagg atgaagcggt agacccgaac gttatgccgg gcgtagagca
      541 cttgcatggc ccgcttgtcg ccgtcggcga tgaggtcgat caacgcctcg tccgacgtgt
      601 cttgcgcagg agccttgaag tgcggcgacg cgacgtcgcg cagcacatac tgattttgca
      661 tgacgatccc ctattaatca gcccttaacc cagttgacta gcagaggcct gttgcttcga
      721 tgttacgtgg aacctggaaa atggtttcgt cgcaggctca attgtttcgc ggctgacgcg
      781 gcgacgaaat aaaggtaatc agataccatc gattgtttcg tccggtgaga caattttgtc
      841 tcagtccagc gccggtgcct ccccggtcgg agaaaacaga tatccgccgc cgcgaacggt
      901 ccggatcacc gagggccgtg ccggatcggg ctcgattttc cgccggatcc gcatgattcg
      961 caggtcgatc gcccggtcga aggcctcggc gtcgcgggca ttggccagct ccagcagccg
     1021 gtcgcgggcg agcacccgct tggggttggc ggcgaagact ttgagcaggc cgtattccga
     1081 cgccgtcagc ggatgctcgt taccctcgtc gtcgcgcagc gcctgggcgt cgtggtcgag
     1141 ccacttggtt ccaaaccgca cccgcgcgct tgcgggcgct gcctgcgggc ctgccgccgc
     1201 gggttgtgcc accggttgaa cggcgctgct ccggcgcagc accgagcgga cgcgggccaa
     1261 gagctcgcgc agctcgcagg gcttggccag atagtcgtcc gcgccgagtt ccaggccgac
     1321 cacgcgatcg atcgcgcttg cggttgcggt gagcatgatg atcggcacgc tggtgcgccg
     1381 tttgagatcg cggatgatcg aaagaccgtc ctcctccggc atattgagat cgaggacgat
     1441 caggtccggt acctgctgcg cgatggtttt gcgcaggctg tcgccgccgt cgcacaagct
     1501 cacgctgaag ccgtgcatgc gcaaatagtc tccgaccatt tcgcgcgcgg gctgctcgtc
     1561 atccaccacg atgatgtgct gcgcttgggt catgttaccg gcaacaccat cttgaacgtc
     1621 gcgccctttc ccgggcccgc gctttcaacg gtgatctgcc caccatgcag atcgacgata
     1681 cgcttgacga tcgaaaggcc gaggccggtc gaggtttcgc ctgcagtcgg cttcgccgag
     1741 agccgttgga aacggccgaa caatcgcgaa atgtcctccg gcgacaggcc cgccccctgg
     1801 tcgctgacct gcacgagtat accgccctcc tcctgcgcca ccaagaggtc gatggctccg
     1861 ccgatcgggc tgtatttgac ggcgttgctc acgaggttgt cgatcgcctc gcggatgcgg
     1921 tcggcatcgc agatggcggc gtgattgggc ggtgcggcga ccgtaatggt ctgttccttg
     1981 cgcgctgcga gcggccggtt cgcttccgcc acttcttcga ccaggaggga gatatcgacg
     2041 ggctcgcgcc ggatagtgat gtcgagcgcg tcggccatcg cgtcagccac gagatcgtcg
     2101 accatttcgg tgagccgatt ggccgcgtcg cggatgtggc cgagctgcac cttcacgttc
     2161 tcgtcgagcg cgccggcccc ggcgatcatc tctcgcaata tttcggttcg gcccagaatc
     2221 acgccgagcg ggtttttcaa gtcgtgcgca actgtgccga ggatttcgct cttgaaggta
     2281 ttggcctgcc gcagccgcgc ccattgcgcc gtcaatcggc ggttggcggt ggtcagatct
     2341 tgcgtgcgcg cggcgacgcg ctcctcgagt cgcgtattcg cgcgctgcag ttgctcgtag
     2401 agaatgacgt tgtcgaaagc gatggacagc cggctgcaga agatctcgac cagcgtgcgg
     2461 tcggtgctgg agagacggcg cgccgcctcg agcacgacga cgacttcacg gccgctcacc
     2521 gtcctgatgt agaggaccga gcgacgcggg gagaactcgt gatggcggcg ggcgaatgcc
     2581 tcctggacca gctggcgtag gtcgtgctcg aggatttgcg agacgtcggt gccaatgaaa
     2641 cggctgtagc aacctgatcc ggcgagcacc gagaatgtct cgcgggcgtt ttgagcctca
     2701 cgcaagacta gaattccggc gcactcgaca ttgagcaacg acccgatctg ggtgagaacg
     2761 ccttcggcca gacgctgcat cgacttgaag tcgaacaagg tcgacgccgc ctcgatgatg
     2821 atttcgagtc cgcggcgcgt ttcaaccatg cgctggagct gctggtagct gcgcagcgcg
     2881 gcggtcaacg acgtgaacag cttgtcggcc
//
LOCUS       DATCWM010000578         2663 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_14934, whole genome shotgun sequence.
ACCESSION   DATCWM010000578 DATCWM010000000
VERSION     DATCWM010000578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2663
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14934"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..355)
                     /locus_tag="VIQ50_11380"
     CDS             complement(<1..355)
                     /locus_tag="VIQ50_11380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEY9361026.1"
                     /translation="MGYLPRRCVPAASLVAALVLLTTAAGAQTGGSEGLSPTLANIKR
                     AHLVRLGYRESSPPFSFLDQANRPIGYSLELCEAIVEEIGVEVDDANLKIEYVKVTSD
                     DRISAVVQNKIDLECG"
     gene            complement(366..1667)
                     /locus_tag="VIQ50_11385"
     CDS             complement(366..1667)
                     /locus_tag="VIQ50_11385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate/amino acid:cation symporter"
                     /protein_id="HEY9361027.1"
                     /translation="MSNRFTQYILIAMALGIVMGTLVFNYLPDSRVEIAADVNLIALM
                     FLRLIKMIIAPLVFATLVGGIAHMGSGSKLGRIFAKTMGWFVSASLVSLLLGLIMVNL
                     LQPGANFPGTLPDKLQSTGLPVSQFSIEKFLTHLIPTSIVDAMAQNEILQIVVFAVFF
                     SVAMGAMPERSKPMLALIDDLGHIMLKVTGYVMLFAPLAVWAAIMATVSKNGLGVLWK
                     LIVFMGGFYLSLLILWGILVIVGFIVIGPRYSHLLRLIREPLMIAFSTASSEAAYPKT
                     LEGLNRFGASSRISSFVLPLGYSFNLDGTMMYCTFASIFIAQTYHIEMSLATQFAMLA
                     TLMITSKGVAGVPRASLVVIASTLGQFGIPEAGLLMIMGIDTFLDMGRSATNVIGNSL
                     ATAVVAKWEGELAPEHALGPDDVVPPDMIPGEVPGMQPGHA"
     gene            complement(1942..>2663)
                     /locus_tag="VIQ50_11390"
     CDS             complement(1942..>2663)
                     /locus_tag="VIQ50_11390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NAD-glutamate dehydrogenase"
                     /protein_id="HEY9361028.1"
                     /translation="AIDALDNKIDGQLQLDLYASVQDLLHSRMVWCVRNVDFSAGLDA
                     VISRFGPCIREIAAELDNALPQDMQAGRSKRRQDLGDGGVPLELAGELADLNTLVSAL
                     DIVTVAGRTNRAIGDTATTFFAAEANFRLDRIIAAARGVPANDFFERLAIDRAVDQIA
                     AAERRLVADMLANGQSGQQAAENWLAAHPEATRIRRSVEEIAASGLTLAKLTVAANLL
                     GDLVKGREGTLTTSNLEHAQL"
BASE COUNT          543 a          819 c          805 g          496 t
ORIGIN      
        1 acccgcattc gagatcgatc ttgttctgca ccaccgccga aatccggtcg tcggatgtga
       61 ccttgacgta ttcgatcttc aggttggcat cgtcgacctc gacaccgatc tcttcgacga
      121 tcgcctcgca gagctccagg ctgtagccga tcggccggtt cgcctgatcg agaaacgaaa
      181 acggcggcga actctcgcga tagcccaggc gcaccagatg cgcccgcttg atattggcaa
      241 gcgtcgggct cagcccttcg ctgccgccgg tctgggcgcc agcggccgtg gtcagcaaaa
      301 ccaaggcggc gaccaggctt gccgccggca cgcatctcct gggaaggtag cccatggctc
      361 gcctcctatg cgtggccggg ctgcattccc ggcacctcgc cggggatcat gtccggcggc
      421 acgacgtcgt cggggccgag cgcgtgctcg ggcgcgagtt cgccctccca cttcgccact
      481 accgcggtcg ccagcgagtt gccgatcaca ttggtggcgc tgcgtcccat gtcgaggaat
      541 gtgtcgatgc ccatgatcat caacaggccg gcttcgggaa tgccgaactg gcccagcgtc
      601 gaggcgatca ccaccagcga agcgcgggga accccggcga cacctttcga ggtgatcatc
      661 aaggtcgcga gcatcgcaaa ctgggtcgcg agcgacattt cgatgtgata agtctgcgcg
      721 atgaagatgc tggcaaacgt gcagtacatc atggtgccgt cgagattgaa cgaatagccg
      781 agcggcagca cgaaactcga gattcgcgag gatgcgccaa accgattgag gccctccagg
      841 gtcttcggat acgcggcttc cgaactcgcc gtcgagaacg cgatcatcag gggttcgcgg
      901 atcagccgca gcagatgact gtatctgggc ccgatgacga taaagccgac gatgacgagg
      961 atgccccaca ggatcagcag cgagagatag aagccgccca taaagacgat cagcttccac
     1021 aatacgccga ggccgttctt cgacactgtt gccatgatcg ccgcccacac cgcaagcggc
     1081 gcaaacagca tgacatagcc ggtcaccttc agcatgatgt ggccgaggtc atcgatcagc
     1141 gccagcatcg gcttggagcg ttccggcatc gcacccatcg ccaccgagaa gaacaccgcg
     1201 aacaccacga tctgcagaat ctcgttctgc gccatcgcat ccacgatcga ggtcggaatc
     1261 aaatgggtga ggaatttttc gatcgagaac tgcgataccg gcaggccggt cgattgcagc
     1321 ttgtccggca gggtgccggg aaaatttgcg cccggctgca acaggttgac catgatcaat
     1381 ccaagcagca gcgaaacgag tgacgcgctg acgaaccagc ccatggtctt tgcgaaaatc
     1441 cgcccgagct tggagccgct tcccatgtgg gcgatgccgc cgaccagggt cgcgaacacc
     1501 aggggtgcga tgatcatctt gatcaggcgc aggaacatca gcgcgatcag gtttacgtcg
     1561 gctgcgattt cgacgcggct atcgggaaga tagttgaaaa ccagcgtccc catcacaatg
     1621 ccaagcgcca tcgcgatcag aatgtattgg gtaaacctgt tggacatttc ttacccccct
     1681 aaattcagcg ccggtgagtt tggcagattc cgggcctggc gcgatacgca ttgcaaaccc
     1741 tcaaacacaa cttcgccgat gtgcccgtcg cgcaaggttt ccctttatga aacgcgcgcc
     1801 cgatatcatg agggtgggcg ttttgtccga gtgcaggccg cgttttggta ccgtctgctc
     1861 cgtattccaa tcccgtttcg acgttcgaac gaagccaatc ctgaatcggc taagctgctt
     1921 tctttgtcgg atagtggcgt ctcacaactg cgcatgctcc aaattgcttg ttgtgagcgt
     1981 gccctctcgg cccttcacca aatcgcccag caaattcgca gccaccgtca gcttggcgag
     2041 cgtcaggcca ctggcagcga tctcctcgac cgaacggcgg atgcgcgtag cttcaggatg
     2101 ggccgcgagc cagttctcgg cggcctgctg gccggactgg ccgtttgcca gcatatccgc
     2161 gaccagtctt ctttccgcgg ctgcgatctg gtcaacggcg cggtcgatgg caagacgttc
     2221 gaaaaaatcg ttcgccggca cgccgcgtgc ggcggcgatg atgcggtcga gacggaaatt
     2281 ggcctcggcg gcgaagaagg tcgtggccgt atcgccgatg gcgcggttgg tgcgcccggc
     2341 gaccgtcacg atatcgagtg cggagaccag ggtgttgagg tcggcgagtt cgccggcgag
     2401 ttccagcggg acgccgccat cgcccaagtc ctgccggcgc ttgctgcgcc cggcctgcat
     2461 gtcctgcggc agggcattat caagctcggc ggcgatctca cggatgcaag ggccgaagcg
     2521 cgagatcacc gcatccagac cggcgctgaa atcgacatta cgcacgcacc agaccatgcg
     2581 ggagtgcagg agatcctgaa ccgaggcgta gaggtcgagc tgcaattgac cgtcgatctt
     2641 gttatcgagc gcatcaatcg cct
//
LOCUS       DATCWM010000579         7337 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_457798, whole genome shotgun sequence.
ACCESSION   DATCWM010000579 DATCWM010000000
VERSION     DATCWM010000579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7337)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7337)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7337
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_457798"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..188
                     /locus_tag="VIQ50_11395"
     CDS             <1..188
                     /locus_tag="VIQ50_11395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361029.1"
                     /translation="ALDNLDRAHDACAEAARLRQNNLHDHLAGAPVVRQRRPAALSLS
                     IFKFVMEMALAFNRRLA"
     gene            527..3220
                     /locus_tag="VIQ50_11400"
     CDS             527..3220
                     /locus_tag="VIQ50_11400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HEY9361030.1"
                     /translation="MLQQAIVTIVDFCTRYAAQIIGIAALLGLAAAVYAAGHFAIDAD
                     VNKLISKDLPWRQREVAFEKSFPPKEETILAVIDAPTSELATQATAALIQKLSDQKDH
                     FHSILEAGGGPFFQKNGLLFLPTPEVVALTKKLGEAKPLIQTLAQDSNLRGLTTALNY
                     GLIGARMNHYTLDDLSGTLNMVSDTLDEAIAGQRASFSWRAMLNGRPPTPDERRRFLQ
                     IRPVLDYAALMPGKVATDAIRQAAADLDIGAKYGAKVRLTGPVAIADEEYATLEEGAY
                     VNTTVTVVVVLTILWLALRSFGIILAVAISLTVGLSITAAIGLALVGALNLISVAFAV
                     LFIGLGVDFGIQFSVRYRAERHEVDNLHEALVNTARHVGAPLTLAAAATAAGFLSFLP
                     TDYKGLSELGLLAGLGMIVAFLTSITLIPALLTVLRPPGEPKEMGFKSLAPVDRFMER
                     YRIPVIIGTGLAVAAGLPLLYWLQFDFNPLNLRSTHVESVATFLELRSDPAIGASSIF
                     VLAPNQEAAKADVEKLSKLPEVSSVKTIENFIPDDQQPKLAAIRQLASVLDPVLRPDP
                     NKKPPTDADNVAALKAAVDALKQAAGTQTGRGAVAAKRLAEDLTKLAQGDETIRARAQ
                     AAMVSPLNTSLDELRNYLQAQPVTLETLPPEIAREWVTQDGRYKVEILPKGDPTDNET
                     LRQFARAVQAVEPNATGGPIAILESGRTVIRAFYEAGFWALGSIIVLLWIVLRRFGDV
                     LLTIIPLLMAGVVTMELMVLLGMKLNFANIIALPLLLGVGVAFKIYYIMAWRAGQTGL
                     LQSSLTRAVMFSALTTATAFGSLWLSSHPGTSSMGKLMALALVTTMAAAVLFQPVLMG
                     PPREPKRLKRRVGAGPAVGATASANAGRLHEPVVAGADKST"
     gene            complement(3181..3516)
                     /locus_tag="VIQ50_11405"
     CDS             complement(3181..3516)
                     /locus_tag="VIQ50_11405"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme iron oxygenase ferredoxin subunit"
                     /protein_id="HEY9361031.1"
                     /translation="MAEKPVPVCAVADLPPGSVRSFEVGDERVAVYNIDGTFYATEAY
                     CTHAMADLGDGILEGDVVECTLHFGAFHVPSGKAVREPCCTDLKTFRTEVKDGQVYVD
                     LSAPATTGS"
     gene            3816..4541
                     /locus_tag="VIQ50_11410"
     CDS             3816..4541
                     /locus_tag="VIQ50_11410"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEY9361032.1"
                     /translation="MAKLDQLIEELVTANRILAREGVVDSFGHVSARHPDNPQHYLLS
                     RSRAPDCIESSDIMEFMLDGTPLDPRGRAPYLERFIHGALYEARPDIMSVVHNHSESV
                     IPFGVTGRKIKPIFHMGASIGHEVPVWDSHDCFGDTALLVENMDMGRDLAKHMGAGPT
                     ALMRGHGATVAGRNIRQAVYISVYLEVNARLQKQAMDMGKVKFLTAGEVDKVAERTGP
                     YGINRAWENWCRRAGRPFQAEQG"
     gene            4667..5533
                     /locus_tag="VIQ50_11415"
     CDS             4667..5533
                     /locus_tag="VIQ50_11415"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9361033.1"
                     /translation="MAAVPFERIDAGAPKTARGDPILVVDEIVKRFETPDGVLTAVDH
                     VSLSVAPGEFVGVIGPSGCGKSTLFNVIGGLLDGYEGTVKVVGERVRGPHPAVGMIFQ
                     EESTFPWRNVIDNVAFPLEIAGLPKAERYERARRFVKLVGLDGFERRYPAELSGGMRQ
                     RVSMARTLAAQPKILLMDEPFAALDEQTRLLLGDKVLQIQQQLKQTTLLITHNITEAV
                     QLSDRIVVMTYRPGKVKRVVEISLPRPRSSEIVSSEAFGRYVAQIWSDLREEASRGLD
                     DEESRKLRESDT"
     gene            5533..6300
                     /locus_tag="VIQ50_11420"
     CDS             5533..6300
                     /locus_tag="VIQ50_11420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007770170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY9361034.1"
                     /translation="MNATLANNRYLPAVLGIGSLIVFVALVELLIRVGVINRFIMPMP
                     SDIIAAFPRVVVEEHVLSRFLLTAAEAFSASILVTVFGVAGGVVLYRYQLLRRATETW
                     VAAIAAAPLVLMYPLYLVIFGRSALTIVMMGFTAGLAPVILKTLEGLSATRRVLINVG
                     KSFNLTPSQQFWKILFPAALPTIFVGLRLGLIFALINIVGVEFLINFGGLGQLINELA
                     ERYDLAGTYAAICFVILVSICVFILTERLERWLRPVD"
     gene            6279..7079
                     /locus_tag="VIQ50_11425"
     CDS             6279..7079
                     /locus_tag="VIQ50_11425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY9361035.1"
                     /translation="MAQTGGLTLPTTKSWGLHLHPVTALRIAIIVAVVVLWEAISASG
                     WLYRDVVPSLGAIGRSLYATLSDATFYFHLGTTAYEIGIAMLVGGLSGLAVGLLLGGS
                     KFMSRAYEAYLYYLGPCPKIIFFPLMIMWFGVGPGSKVAMGAISCFFPVALNIAGGMR
                     EIDKVLIRVGRSFRANTWQMVCKIYLPAMRHPVINGVRLGLGVALIGTLLAETKLSNR
                     GIGFLVIQAYSIFNMPQMYALLIILFVISIGANTVIGRFGGLDEIKRS"
     gene            7110..>7337
                     /locus_tag="VIQ50_11430"
     CDS             7110..>7337
                     /locus_tag="VIQ50_11430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361036.1"
                     /translation="MVAVASAAKTEPLLPNLPSHRDPYYAGRWQKPKSPRYVDSISPG
                     TGEPLGPVVDGSAACSRSRLGSRNQPYLPVPL"
BASE COUNT         1307 a         2326 c         2276 g         1428 t
ORIGIN      
        1 gcgcgctcga caatctcgat cgcgcgcacg acgcctgcgc agaagccgcg aggttgcgcc
       61 agaataacct tcatgatcat ctcgcagggg cgcccgtagt ccgccagcgc cgccccgcag
      121 cgctctccct gagcatcttt aagttcgtga tggaaatggc gttggcattt aaccggcgtt
      181 tggcatagac cgccgccgga tgatcgtgat cgatcaacca aggcagcggg gagggcggga
      241 caggatccgg cagggacgtc ggcagggtca tgattccaac attttcccac ataggttggc
      301 gcaggcacag cccaaatcag cgggaatttg cggtttcggc gacccatcgt cgcgctcgtc
      361 gaacttgacg cgccactttg gggttagccg atttgattgg tgttctggca gtgttcctgt
      421 gcaacctgta gtcgttgtca atgcagtgca ttgcctgata ttccgccggc catactcgtc
      481 cattccttcc ggttggatcc cagtcgcata gctcccagga ctaggcatgc tgcagcaagc
      541 gatcgtcact atcgttgatt tctgcacccg ttatgccgcg caaatcattg gcatcgcggc
      601 acttttgggt ctcgccgcgg ccgtatacgc ggccggccat ttcgccatcg acgccgacgt
      661 caacaagctc atttccaagg acctgccgtg gcggcaacgc gaggtggcat tcgaaaagtc
      721 gttccccccg aaggaagaaa ccatcctcgc cgtcatcgac gcgccgacct ccgaactcgc
      781 aacgcaggcc acggcggcgc taatccaaaa gctgtccgat cagaaggatc acttccactc
      841 gatcctggag gccggaggag ggccgttctt ccagaagaac ggacttttgt tcttgccaac
      901 cccggaggtg gtcgcgctca ccaagaaact cggcgaagcc aagccgctga tccagacgct
      961 ggcgcaggat tccaatttgc gcggcctgac gaccgccctc aattacggat tgatcggcgc
     1021 gcgcatgaac cactatacgc tcgacgatct gtccggcacg ttgaacatgg tgtcggacac
     1081 tctcgacgag gcgattgcgg ggcagcgcgc gagcttctcc tggcgcgcga tgctcaacgg
     1141 acgtccgccg acgccggacg agcgtcgtcg cttcctccag atccggccgg tgctcgacta
     1201 tgccgccctc atgccgggca aagtggcgac cgacgccatc cgccaggcgg cggccgattt
     1261 ggacatcggc gcgaaatacg gcgcaaaagt acggctgacc ggaccggtcg cgatcgccga
     1321 cgaggaatat gccaccttgg aagagggggc ttacgtcaac accacggtga ccgtcgtcgt
     1381 agtgttgacc atcctatggc tggccttgcg ctcgtttggc atcatcctcg cggtcgccat
     1441 cagtttgacg gtgggccttt ccatcaccgc cgcgatcggc ctcgccctcg tcggagcact
     1501 caacctgatt tcggtcgctt tcgcagtcct gttcatcggg ctcggtgtcg acttcggcat
     1561 tcagttcagc gtgcgctatc gcgcggagcg gcacgaggtg gataatctcc acgaggcgct
     1621 ggtcaacacc gcgcgccacg tgggcgcgcc gctcacgcta gccgcggcgg caaccgctgc
     1681 cgggtttctg tcgttccttc ccaccgacta caaaggcctc tccgagctcg gcttgctcgc
     1741 aggtctgggc atgatcgtcg cctttctcac cagcatcacg ctcattcctg cgttgttgac
     1801 cgtcctgcgg ccgccgggcg agccgaagga aatggggttc aagagcttgg cgccggtcga
     1861 tcgattcatg gagcggtacc gaatccccgt catcatcggc actggcctcg cagtcgccgc
     1921 cggactgccg ctgctctact ggctccagtt cgatttcaat ccgctcaacc tgcgcagcac
     1981 ccacgtcgaa tccgtcgcga ccttcctgga gctgcgaagc gatcccgcca tcggtgcaag
     2041 ctcgatcttc gtgctggcgc cgaaccagga ggccgccaaa gccgacgtgg agaagctctc
     2101 caagctgccc gaggtatcga gcgtaaagac catcgagaat ttcattcccg acgaccagca
     2161 gcccaagctt gccgccatcc gccagctggc gagcgtgctc gatccggtac tgcggccgga
     2221 cccgaacaag aaaccgccga cggatgccga caacgtcgcc gcgctcaagg ccgcggtcga
     2281 tgctttgaag caagcggctg ggactcagac cgggcgcggc gcagtggccg ccaagcggct
     2341 ggcggaggac cttacgaagc tcgctcaagg cgatgaaacc atacgcgcgc gggcgcaagc
     2401 ggcgatggtc tctccgctca acacctcgct cgacgaacta cgaaactatt tgcaggcgca
     2461 gccggtcacg ctcgaaacgc tgccacccga gatcgcgcgt gagtgggtca cgcaagatgg
     2521 gcgatataag gtggaaatcc ttcccaaagg cgatccgacc gacaacgaaa cgttacgcca
     2581 gttcgcccgc gctgtgcagg ccgtcgaacc gaacgccacc ggcggtccga tcgccatcct
     2641 cgaatcgggg cgcaccgtga tccgggcatt ctatgaagcc ggcttctggg cgctcggctc
     2701 gatcatcgtt ctactctgga tcgtgttgcg ccgcttcggc gacgtcctcc tcaccatcat
     2761 tccactgctc atggccggcg tcgtgaccat ggaactgatg gtcctcttgg gaatgaagct
     2821 caatttcgcc aacatcattg cgctgccgtt gctgctaggc gtcggtgttg ccttcaagat
     2881 ctactacatc atggcctggc gagccggcca aaccggtctt ctgcaatcga gcctcacgcg
     2941 ggccgtcatg ttcagcgcgc tcaccaccgc cacggcgttc ggcagcctgt ggctgtcgag
     3001 ccatcccggc acctcgagca tgggcaaatt gatggcgctg gcgctcgtca cgacgatggc
     3061 ggcggcggtg ctgttccagc cggtgctgat gggccccccg cgcgagccaa agaggctcaa
     3121 acgccgcgtc ggcgcgggcc cggccgtggg cgcgactgca agtgcaaacg cggggcggct
     3181 tcacgaaccg gtcgtcgccg gtgccgacaa gtcgacatag acctgcccgt ccttcacctc
     3241 ggtgcggaac gtcttgagat cggtgcagca gggttcacgc acggctttgc cgctcggcac
     3301 gtggaacgcg ccgaaatgca gcgtgcactc gacgacgtcg ccttccagga tgccgtcgcc
     3361 gaggtcagcc atggcgtggg tacaataggc ctccgtggcg tagaacgtac catcgatgtt
     3421 gtagacggcg acgcgctcgt cccccacctc gaagctcctg acgctgcccg gcggcagatc
     3481 ggccactgcg cagacgggaa cgggcttttc ggccatgttc gatgacaccc tttttcagtt
     3541 tgtcattccc gccgagccgc aatgacggcg agaaccgctc gataagcacc agtggtggct
     3601 atggaccgcg gctcgcgcct tgctccgcgc ggcgtagggc cccgtccgac tttattgaca
     3661 tgactaacgc aaacatcatg cgtgcttagc gggcttggcg aaaagttcaa tagggcaggg
     3721 gcgtcagctg caccaggagt catcacggcc gaattgcccg ctcgcgggcc ggcatgtagg
     3781 ttcctgccaa gcggagaggc gcagcgcgag ggaaaatggc caagctcgat cagctcatcg
     3841 aagagctcgt tactgcaaac cgcattctcg cgcgtgaagg cgtggtcgat tccttcggtc
     3901 atgtcagcgc gcgccatccc gacaatccgc aacattacct gctgtcgcgt tcgcgcgcgc
     3961 ccgactgcat tgagagcagc gatatcatgg agttcatgct cgacggcacg ccgctcgatc
     4021 cgcgcggtcg cgccccatat ttggagcggt tcatccatgg cgcgctctac gaggcgcggc
     4081 cggacatcat gtcggtcgtg cacaatcaca gcgaaagcgt cattccgttc ggcgtgaccg
     4141 gccggaagat taagccgatt ttccacatgg gcgcatcgat cggccacgag gtgccggtct
     4201 gggattccca tgattgtttc ggcgacaccg cattgctggt cgagaacatg gatatgggac
     4261 gcgacctggc aaagcacatg ggcgcgggtc cgaccgcgct gatgcgcggt catggtgcaa
     4321 ccgtcgccgg acgcaacatc cggcaggcgg tttatatttc tgtctatctc gaggtcaatg
     4381 cgcggctaca aaagcaggcg atggacatgg ggaaggtcaa attcctgact gccggcgagg
     4441 tggataaggt cgccgaacgc accgggccct atggcatcaa tcgggcgtgg gagaattggt
     4501 gccggcgcgc cgggcgtcca ttccaggcag agcagggctg aggcgcagcg ccgcacgaag
     4561 aggctgcggc gggagtcgcg caggctcgat gtgctatagg cgaggcgggg gcggcgtcag
     4621 aagcgaggca agccgcacga cgatgggtgg cggaagggaa cgataaatgg ctgccgtgcc
     4681 atttgagcgg attgacgcag gcgcgccgaa aaccgcgcgc ggcgatccca ttctggtcgt
     4741 cgacgagatc gtcaagcgat ttgagactcc ggacggcgtg ctcaccgcgg tggaccacgt
     4801 ttcgctcagc gtcgcgccgg gcgaattcgt cggcgtgatc ggcccctccg gctgcggcaa
     4861 atcgaccttg ttcaacgtca tcgggggctt gctcgacggc tacgagggca cggtcaaggt
     4921 ggtgggcgag cgggtgcgag gcccgcatcc cgcggtcggc atgatcttcc aggaggaatc
     4981 gacctttccc tggcgcaatg tgattgacaa tgtggccttt ccgctggaga tcgccggttt
     5041 gccgaaagcc gagcgctacg agcgggcgcg gcggttcgtg aagctcgtcg gcctcgacgg
     5101 cttcgagcgg cgctacccgg cggagctatc gggcggtatg cggcagcggg tgtcgatggc
     5161 gcgcacgttg gcggcgcaac ccaagatcct gctgatggac gagccgttcg ccgcgctcga
     5221 cgagcagacc cggctcctgc tcggggataa ggtcctgcag atccagcagc agctcaagca
     5281 aacgaccctg ctgatcaccc acaatatcac cgaggcggtg cagctctccg accgcatcgt
     5341 ggtgatgacc tatcgccccg gcaaagtgaa gcgggtggtg gagatcagcc tgccgcggcc
     5401 gcgcagctcc gaaatcgtct ccagcgaggc gttcgggcgc tacgttgcgc aaatctggag
     5461 cgatctgcgc gaggaggcga gccgcggact ggatgacgag gagagcagga aattgcgcga
     5521 atccgacacg tgatgaacgc gacgctcgcc aacaaccgct atcttccggc cgtgctcggc
     5581 atcggctcgc tcatcgtttt cgtcgccctc gtcgaattgc tcatccgcgt cggcgtcatc
     5641 aaccgcttca tcatgccaat gccttccgac atcatcgccg cgtttccacg ggtggttgtc
     5701 gaggagcacg tgctttcgcg cttcctgctc accgccgccg aggcgttttc ggccagcatc
     5761 ctggtgactg tttttggcgt ggccggcggg gttgtgctct atcgctatca gttgttgcgg
     5821 cgcgcgaccg agacctgggt cgcggcgatc gcggcggcgc cgctcgtgct gatgtacccg
     5881 ctctatctcg tgatcttcgg caggagcgcg ttgactatcg tgatgatggg gtttaccgcc
     5941 ggcctggccc ccgtcatcct caagacgctc gaggggcttt ccgccacgcg acgcgtgctg
     6001 atcaacgtgg gcaagagttt caatctgacg ccgtcgcagc agttctggaa gatcctgttt
     6061 cccgccgcgc tgccgaccat cttcgtggga ctgcggctcg gtctgatctt cgcgctcatc
     6121 aatatcgtcg gcgtcgaatt tctgatcaat ttcggtggcc ttggtcagct tatcaacgag
     6181 cttgccgagc gctacgatct tgcgggaacc tatgcggcga tctgtttcgt gatcctggtg
     6241 agcatttgcg tgttcatcct cactgagagg ctggagcgat ggctcagacc ggtggattga
     6301 cgctgccgac gaccaagtcg tgggggctac atttgcaccc cgtcaccgcg ttgcgcatcg
     6361 cgatcatcgt cgccgtcgtg gtgctttggg aagccatctc ggcgtcggga tggctctacc
     6421 gcgacgtcgt gccttcgctc ggcgccatcg gtcgatctct ctatgcgacg ttgagcgatg
     6481 cgacgttcta cttccacctc ggcaccaccg cctatgagat cggcatcgcg atgctcgtcg
     6541 gcggcctgag cggactcgcg gtaggcctgc tgctgggcgg cagcaaattc atgtcgcgcg
     6601 cctacgaagc ctatctttac tatctcggcc cctgcccgaa gatcatcttc ttccccctca
     6661 tgatcatgtg gttcggcgtc ggacccggat cgaaagtggc gatgggggcg atttcctgtt
     6721 tctttccggt cgcgctcaac atcgcgggcg gcatgcgcga aatcgacaag gtgctcattc
     6781 gcgtcggaag gagcttccga gccaatacct ggcagatggt ttgcaaaatc taccttcccg
     6841 ctatgcgcca cccggtgatc aacggcgtgc ggctcggcct gggcgtggcg ctgataggca
     6901 cgctgcttgc ggagacgaag ctctccaacc gcggcatcgg cttcctggtg attcaggcct
     6961 acagcatctt caacatgccg cagatgtacg cgctgctgat catcctcttc gtgatctcaa
     7021 tcggcgccaa cacggtcatc ggtcgcttcg gcggcctcga cgagatcaaa cgatcctgag
     7081 tgcttcactc ccacggttgg aggtgaccaa tggttgcagt tgcatcggcg gcaaagactg
     7141 agccgcttct tcccaatctg ccgtcgcacc gcgatcccta ttacgccggt cgctggcaga
     7201 agccgaaatc gccgcgttac gtcgacagca tcagcccggg aacaggcgag ccgttgggcc
     7261 cagtggtcga cggctcggcg gcctgttcga gatcgcgtct tggctcgcgc aaccaaccct
     7321 acttgccagt gccgctg
//
LOCUS       DATCWM010000580         3011 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_258219, whole genome shotgun sequence.
ACCESSION   DATCWM010000580 DATCWM010000000
VERSION     DATCWM010000580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3011
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_258219"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(59..298)
                     /locus_tag="VIQ50_11435"
     CDS             complement(59..298)
                     /locus_tag="VIQ50_11435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008130699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEY9361037.1"
                     /translation="MSDIGERVKKIVVEHLGVEAEKVTENASFIDDLGADSLDTVELV
                     MAFEEEFGCEIPDDAAETILTVGDAIKFLEKNAKS"
     gene            complement(528..1265)
                     /gene="fabG"
                     /locus_tag="VIQ50_11440"
     CDS             complement(528..1265)
                     /gene="fabG"
                     /locus_tag="VIQ50_11440"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006610958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein]
                     reductase (NADPH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] reductase"
                     /protein_id="HEY9361038.1"
                     /translation="MFDLTGKTALVTGASGGIGGAIARAFHQQGATVALSGTRRDVLD
                     RLSGELEDRTHVLPCNLGNKDEVEALVPKCEEVMGQLDILVANAGINKDNLLVQLRDE
                     DWDEVVAINLTATFRLARAALRGMMRRRFGRIIGIGSVVGITGNPGQGNYTATKAGMI
                     GMIKSIAAEYAKRGVTANCIAPGLIATAMTDKLNDKQREAILARVPAGRLGGGADVAA
                     AAVYLASEEAAYVTGQTLHVNGGMAMI"
     gene            complement(1281..2225)
                     /gene="fabD"
                     /locus_tag="VIQ50_11445"
     CDS             complement(1281..2225)
                     /gene="fabD"
                     /locus_tag="VIQ50_11445"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018317572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HEY9361039.1"
                     /translation="MSFAFVFPGQGSQAVGMGKALADAFAPARSVFEEVDAALGEKLT
                     RTMWEGPAEALTLTENAQPALMAVSLAAMRVLEAHAGVDLARDARFVAGHSLGEYSAL
                     AAAGALTIADTARLLRLRGRAMQKAVPVGTGAMAALLGLDFEQAAGVAAEAAQGQVCQ
                     AANDNGGGQVVVSGDKAAVERAVEIAREKGARRAMMLPVSAPFHCALMQPAADAMAAA
                     LATVTVKPPLVPVVANALVRPIREPADIVGALVAQVTGTVRWRESITFMAAAGVTTFY
                     EVGAGKVLSGLVRRIADRARGVSIGTPDDVAIFRLAEA"
     gene            2529..>3011
                     /gene="rpsF"
                     /locus_tag="VIQ50_11450"
     CDS             2529..>3011
                     /gene="rpsF"
                     /locus_tag="VIQ50_11450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012043898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HEY9361040.1"
                     /translation="MPLYEHVFITRQDASAQQVEDLTAQFKTVIEQMGGKIAKTEQWG
                     MKSLAYRLRKNRKAHFTLLNIEAPPAALNEVERQERLSEDVLRYLTVRVREHEEGPSA
                     MMRKVDRDRERDDRGFGFRDRDRDRGGFRDRDRGEYRRDREGRPPREGHEESAPGAAA
                     A"
BASE COUNT          516 a         1040 c          937 g          518 t
ORIGIN      
        1 gcgccaaggc gatatccgat cacaaatcgc gagggggccc gtgcacgccg ggcgggggtt
       61 aactctttgc gttcttttct aggaatttaa tggcgtcgcc gaccgtcaat atggtctcgg
      121 cggcgtcgtc ggggatctcg caaccgaatt cttcctcgaa tgccatcacg agttcgaccg
      181 tgtcgaggct gtcggcgccg aggtcgtcga tgaagcttgc gttctcggtc accttttcgg
      241 cttcgacgcc caaatgttcc accacgatct ttttcacccg ctcgccaata tcactcatcg
      301 ctgcaacctc gcgtccttcg aattgggctc gatcggtcag cgcccccgag ccattgcggt
      361 atgggcttgt atccggcgtc ggatcatcgg gtcgcgagcg gacccctggt gacgattgga
      421 accgttatgc cgccccggcc aaaccaaagt ccggttacca tacttcaaat gccttgacca
      481 gcacggccac gccgcaccgg gacagggtgt cgctgtcacg acgacgctca aatcatcgcc
      541 atcccgccgt tcacgtgcag cgtttggccg gtgacataag cggcctcttc cgaagcgaga
      601 tagaccgcgg ccgccgccac gtccgccccc ccgcccaggc ggcccgccgg gactcgggcg
      661 aggatcgcct cccgctgttt gtcgttgagc ttgtcggtca tagccgtggc gatcaagccc
      721 ggcgcgatgc agttcgcggt gacgccgcgt ttggcatatt cggcggcgat cgacttgatc
      781 attccgatca tgccggcctt ggtcgccgtg taattgcctt ggccgggatt gccggtgatg
      841 ccgaccaccg aaccgatgcc gatgatgcgg ccaaagcggc ggcgcatcat gccgcgcaac
      901 gccgcgcggg cgagccggaa cgtcgccgtc agattgatcg caaccacctc gtcccagtcc
      961 tcgtctcgca gctgaaccag gagattgtcc ttgttgatcc ccgcattggc caccaggatg
     1021 tcgagctggc ccatgacttc ctcgcacttg ggcaccagtg cctcgacctc gtccttgttt
     1081 ccgagattgc aaggcaggac atgggtgcga tcctcgagct cgccggagag ccgatcgagc
     1141 acgtcccgcc gtgtaccgga gagcgctacg gtggcgcctt gctggtgaaa tgcgcgggca
     1201 atcgcgccgc cgatcccgcc gctcgccccg gtgacgaggg cggttttgcc agtcagatcg
     1261 aacatcatcg ctcctcgacg tcacgcctcg gcgagcctaa atatcgcgac atcgtccggc
     1321 gttccgatcg aaacgccgcg cgcgcgatcg gcgatgcgcc tgacaagccc gctcaatact
     1381 ttgccggcac cgacctcata gaacgtcgtg acgcccgccg ctgccatgaa agtgatcgac
     1441 tcgcgccagc gcaccgtccc ggtgacttgc gcgaccaacg ccccaacaat gtcggccggc
     1501 tcgcggatcg gtctcacgag cgcgttggcg acgaccggaa ccagcggagg tttcaccgtc
     1561 acagtcgcca acgccgcagc cattgcgtcg gcggcgggct gcatcagcgc gcagtggaag
     1621 ggagcggaga cgggcagcat catcgcgcgc cgcgcgcctt tttccctggc gatctcgact
     1681 gcgcgttcga cggccgcctt gtctcccgaa accaccacct gtccaccgcc gttgtcgttc
     1741 gccgcctggc agacttggcc ctgcgcggct tcggccgcga cccccgcagc ttgttcgaag
     1801 tcgagcccga gcagtgcggc catggcgccg gtgccgaccg gaacggcctt ttgcatcgcg
     1861 cgcccgcgca ggcgcaggag ccgcgcagtg tcggcaatcg tgagggcacc ggccgcggcg
     1921 agcgccgaat attctccgag cgagtgcccg gcgacgaacc gcgcgtcgcg cgccagatcg
     1981 acgccggcat gggcttccag cacccgcatg gccgccagcg agactgccat cagcgcgggc
     2041 tgcgcgttct cggtcagcgt cagcgcctcg gcaggcccct cccacatggt gcgcgtgagc
     2101 ttctcgccga gcgccgcatc gacctcctcg aacaccgaac gggccggcgc aaaggcatcg
     2161 gcgagggcct tgcccatccc aaccgcctgg ctgccctgcc ccggaaaaac gaaagcgaac
     2221 gacattccct cgccttgaag agatcggccc taagaccacc gcgatatccg cgctgtcaag
     2281 cggcgacggc acggctgcgg gtcttggaat cgcgccgccc gccttgtctt ttcgtccgaa
     2341 ctccgtataa ccgccgcttc cgctcgctcc cggctgggaa ctgaacggac ggctgcatca
     2401 ccaagtgcgg tgcggcagga cctgatggtc cggcgtccgg tgttcccgcc ttctgagcat
     2461 tcgagccttt cccggaaagt ctcgaagggc tttgcgcctg gaggagcgcc aaaggaggaa
     2521 aggcatccat gccgctctac gaacacgtct ttatcacgcg ccaggacgcg agcgcgcagc
     2581 aggtcgaaga cctgaccgcg cagttcaaaa ccgtcatcga gcagatgggc ggcaagatcg
     2641 ccaagaccga acaatggggg atgaaatccc tcgcctatcg gctgcgcaag aaccgcaaag
     2701 cgcatttcac cctgctcaac atcgaggcgc ctccggccgc tctcaacgag gtcgagcggc
     2761 aagagcggct gagcgaggat gtgttgcgct atctcacggt tagagtgcgc gagcacgagg
     2821 agggcccgtc cgcgatgatg cgcaaggtcg accgcgatcg cgagcgcgac gaccgcggtt
     2881 ttggcttccg cgaccgtgat cgcgaccgcg gaggcttccg tgatcgcgac cgtggtgagt
     2941 accgtcgcga ccgcgagggc cgtccgccga gggaaggcca cgaggagtcc gcacccggcg
     3001 ccgccgccgc g
//
LOCUS       DATCWM010000581         2707 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_500916, whole genome shotgun sequence.
ACCESSION   DATCWM010000581 DATCWM010000000
VERSION     DATCWM010000581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2707
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_500916"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            74..1843
                     /locus_tag="VIQ50_11455"
     CDS             74..1843
                     /locus_tag="VIQ50_11455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NirA family protein"
                     /protein_id="HEY9361041.1"
                     /translation="MSGDFSPEQKRYLEGFVAGLQIAKAARVQGGGASAAAAEPSGPD
                     AAHLHAQDRVLKAGGKLSEQEKFKRELHPFDGYERLKAQATNNEYPKPADNFRWRFFG
                     LFYVAPNQNSYMCRLRMPNGILAHWQFAGVADLAERYGGGYAHVTTRANLQVREIEAK
                     NAVAMIEAIQDLGLCSRGSGADNIRNVTGSPTAGIDPQELIDTRPFAREWHFHILNER
                     ALYGLPRKFNVGFDGGGIIPVLEDTNDIGFQAVEVKAGCEVAPGIWFRLLLGGITGHK
                     DFARGTGVVVNPADATKVADAVVRVFIDHGDRTDRTKARLKYVIDRLGLDKVLSLVED
                     KLGRKLDRVGSDALAPRAPFDRAAHIGAHAQKQPERNWIGVVLPVGKMTADQMRGLAQ
                     VARDLGDGDIRLTVWQNLIISGVRSADVATAQACIEAIGLSISATSIRAGLVACTGNV
                     GCKFAASDTKRHAEEIARWCESRVALDSPVNIHLTGCHHSCAQHYIGDIGLLACKVQT
                     SEDGDAVEGYHVHVGGGFGPDAAIAPEIYRDVKAEDAPRLVGRMLKAYLAHRASPQEG
                     FLAFTRRHDIAALRTLIDGEAVE"
     gene            1840..>2707
                     /locus_tag="VIQ50_11460"
     CDS             1840..>2707
                     /locus_tag="VIQ50_11460"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114517.1"
                     /note="Catalyzes the reduction of sulfite to sulfide, an
                     essential step in the anaerobic sulfate-respiration
                     pathway; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite reductase subunit alpha"
                     /protein_id="HEY9361042.1"
                     /translation="MILPPQGPLPSLIPESAPFSAEQRVWLNGLFAGLLSLEGGITAL
                     SLEQAAALLPGALDLAAPAKPAAEDDDGAPWHDPALPLADRMKLAEGRPVRRRLMAAM
                     GQQDCGQCGYNCQDYSDAIFLQKEARLNLCVPGGKDTARMLKALYAELGKGPAAAESP
                     TLTPADATAAPATAPGYSREHPAQAVFLSRTRLNKAGSEKETWHIEFDLAGSGIEYAV
                     GDAFGIFPTNDPALADAVIAALEAPPDFPIGGRALRDVLIDGVSLGAAPDMLFQLFSY
                     VTGGERRQKAKAL"
BASE COUNT          484 a          921 c          872 g          430 t
ORIGIN      
        1 gggccggcaa ggccgttttg cgcgggcgct tggcctgcgt actgctcaaa aaagaagccg
       61 caagagcaaa ccaatgtccg gcgatttcag ccccgaacaa aagcgctacc tcgagggctt
      121 cgtcgccggc ctgcagatcg ccaaggccgc gcgcgtccaa ggcggcggcg ccagcgctgc
      181 ggcggcggag ccgagcggcc ccgacgccgc gcacttgcac gcgcaggatc gcgtcctcaa
      241 agccggcggc aagctctccg aacaggaaaa attcaagcgc gaactgcacc cattcgatgg
      301 ctacgaacgg ctcaaggcgc aggcgacaaa caacgaatat cccaagccgg ccgacaattt
      361 ccgctggcgt ttctttggcc tgttctacgt cgcgccaaac cagaactcct acatgtgccg
      421 gctgcgcatg ccgaacggca tcctcgcgca ctggcaattc gccggcgttg ccgatctcgc
      481 cgagcgctac ggcggcggct atgcccacgt caccacccgc gccaatctcc aggtgcgcga
      541 gatcgaggcc aagaacgccg tcgccatgat cgaggcgatc caggatctcg ggctgtgctc
      601 gcgcggctcg ggtgccgaca atattcgcaa cgtcacaggc tcgcccacgg cgggcatcga
      661 tccgcaggag ctgatcgaca cccggccttt cgcccgcgaa tggcatttcc acattctcaa
      721 cgagcgcgcg ctttacggcc taccgcgcaa gttcaacgtc gggttcgacg gcgggggcat
      781 cattcccgtg ctggaggaca ccaacgacat cggcttccaa gcggtcgagg tgaaagcagg
      841 atgcgaggtc gcgcccggca tatggttccg tctcctcctc ggcggcatca ccgggcacaa
      901 agactttgcg cgcggcaccg gcgtagtggt caacccggcc gatgcgacca aggtggcgga
      961 tgccgtcgtg cgcgtattca tcgatcacgg cgaccggacc gaccgcacca aggcacgtct
     1021 caaatacgtc atcgaccgcc taggactcga caaggtgctt tcgctggtcg aggacaaact
     1081 cggacgcaag cttgaccgcg tcggcagtga tgcgctggcg ccgcgagcgc ctttcgatcg
     1141 cgctgcgcat atcggcgcgc atgcacagaa gcagccagaa cgcaattgga tcggcgtcgt
     1201 cctcccggtc ggcaagatga ccgccgatca gatgcgcggg ctcgcgcagg tcgcccgcga
     1261 tctcggcgac ggcgatatcc gcctcaccgt ctggcagaac ctgatcatct ccggggtgcg
     1321 ctcggcagat gtggcaacgg cccaagcgtg tatcgaagcg atcggcctgt ccatcagcgc
     1381 cacctcgatt cgcgccggcc tcgtcgcctg cacgggcaat gtcggctgca agtttgccgc
     1441 ctccgatacc aagcggcatg ccgaggagat cgcgcgctgg tgcgagagcc gcgtcgcgct
     1501 cgactcaccc gtcaacatcc atctcaccgg atgccatcac tcctgcgcgc aacattacat
     1561 cggcgatatc gggttgctgg cctgtaaagt gcagacctcc gaggacggcg acgcggtcga
     1621 gggatatcac gttcacgtcg gcggcggatt cggccccgac gcagcaatcg cgccggaaat
     1681 ctaccgcgac gtcaaagccg aggacgcgcc gaggctcgtc gggcgcatgc tcaaggccta
     1741 cctcgcgcat cgcgcctcgc cacaggaagg cttcctcgct ttcacccgcc ggcacgacat
     1801 cgcggcgctg cgaaccctga tcgacggcga ggcggtggaa tgatcctgcc gccgcagggg
     1861 ccgctgccgt cgctgatccc ggagagcgcg ccgttcagtg ccgagcagcg cgtttggctc
     1921 aacggcctgt tcgccgggct gctctcgctc gaaggcggca tcaccgcgct gtcgctggag
     1981 caggcagcgg ccttgctgcc gggcgcgctc gatctcgccg cgccggccaa gccggccgcc
     2041 gaagatgatg atggcgcgcc ctggcacgac ccggcgttgc cgctcgccga tcgcatgaag
     2101 cttgccgaag gccgtcctgt gcgccggcgc ttgatggcgg caatgggaca acaggactgc
     2161 gggcaatgtg ggtacaattg tcaggactat tcggacgcca ttttcctgca aaaggaagcg
     2221 cggctgaacc tgtgcgtgcc gggcggcaag gacaccgccc gtatgctcaa ggcgctctac
     2281 gcggaactcg gcaaaggacc ggcggcggcc gagagcccga cccttacgcc tgccgatgct
     2341 acggctgcac cggcgaccgc gccgggatat tcgcgcgagc atccggcgca ggcggtgttc
     2401 ctgtcgcgga cgcgcctcaa taaggcgggc tcggagaagg aaacctggca catcgagttc
     2461 gatctggcgg ggagcggcat cgagtatgcg gtcggcgacg ccttcgggat atttccgacc
     2521 aacgatcccg cgcttgccga tgccgtgatc gcggcgctcg aggcgccgcc ggatttcccg
     2581 atcggcggac gggcgctgcg cgatgttctg atcgacggcg tttccctcgg cgccgccccc
     2641 gacatgctgt ttcagctctt ctcctacgtc accgggggcg agcggcggca gaaagccaag
     2701 gcgctcg
//
LOCUS       DATCWM010000582         2295 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_366002, whole genome shotgun sequence.
ACCESSION   DATCWM010000582 DATCWM010000000
VERSION     DATCWM010000582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2295)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2295)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2295
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_366002"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2295
                     /locus_tag="VIQ50_11465"
     CDS             <1..>2295
                     /locus_tag="VIQ50_11465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012706270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEY9361043.1"
                     /translation="TGRGRFSDDFSLEGQAYAVMLRSPHPHARILGIDAARAKAMPGV
                     LGVFTGADCRADGLGAIPHDPLPKTKYDMKLHAAGGGAVFFGPHSLLPDAKARHVGEA
                     VAMVVAETVPQALDAAEAVEIDYEVLPGIYHSEDAMRPGAPVIWSEVPSNVPIDTFFG
                     DREATEEAFARADHVVALDLHIDRVTGLPLEPRAALGEYDSASGRYTLHAGSGGAVRQ
                     KRELAAVLGIAPERVRVLSYDVGGNFGTRNRVFVEFALVLWAARKLGRPVKFTATRSE
                     AFLSDYQGRDLVTKVELALARDGRLLAMRATNISNVGAYCVSLSPLSKGAGLIVGPYA
                     IPHAFLRAMAVFTNTTPTNAYRSSGRPEVTFAIERLIDTAAERLGIDRVELRRKNLIR
                     PEAMPYRNAVGMTYDSGRYQESMDRAMEIADWKGFEQRRREAAKRGRLLGRGLANYVE
                     SSIGAPNEQARITVRPQRRVEVVIGTQPSGQGHETSFAQVISDLLRVPVESVKIILGD
                     TDVVKVGGGSHSGRSMRHAATVFAKALPELVARGKKVAAAILRSIPDHIEFSDGRFSA
                     RETNRTFDFLDLAEEAARHELPQELKDGIAVVTDNEMHDPVFPNGCAICEVEVDPQTG
                     DVRIIRYASVDDVGRCINPLIVDGQTHGAIAQGVGQALWEQCYVDHDSGQPLVGSLMD
                     YGVPRADTVPPFVTEIAEVLSPTNPLGIKAGGEGGTTAAPAAVISAILDALRDYGVRD
                     IKMPATPYNVWKAIADANADRETG"
BASE COUNT          397 a          754 c          766 g          378 t
ORIGIN      
        1 cgaccggacg cggccgcttc agcgatgact tcagcctgga gggccaagca tatgcggtaa
       61 tgctgcgctc gccgcatccg cacgcgcgca ttcttggcat cgatgcggcg cgcgccaagg
      121 cgatgccggg cgtgctcggc gtgttcaccg gcgccgactg ccgcgccgac gggctcggcg
      181 ccatccccca tgatccgctg cccaagacca aatacgatat gaagctgcac gcggcgggcg
      241 gcggggcggt gttcttcggc ccgcactcgc ttttgcccga cgccaaggcc cgccatgtcg
      301 gggaggccgt ggctatggtc gtggccgaga ccgtgccgca ggcgctcgac gcggcggagg
      361 ccgtcgagat cgactatgag gtgctgccgg ggatctatca ttccgaagac gcgatgcggc
      421 cgggcgcgcc ggtgatttgg agcgaggtcc caagcaacgt tccgatcgat acgtttttcg
      481 gtgaccggga ggcgaccgag gaggcgttcg cgcgtgccga ccatgtcgtt gcgctcgacc
      541 ttcacatcga ccgggtgacc ggactcccgc tcgaaccgcg cgcggcgctg ggtgaatacg
      601 attcggcgag cgggcgctac acccttcatg ccggcagcgg cggtgcagtg cggcagaaac
      661 gcgagcttgc ggccgtgctc ggcatcgcgc ccgaacgcgt gcgcgtcctg tcttacgacg
      721 tgggcggcaa tttcggcaca cgcaaccgcg tcttcgtcga gttcgccctc gtgttgtggg
      781 ccgcgcgcaa gctcggccgt ccggttaagt tcactgcgac gcgatccgag gcgttcctga
      841 gcgactatca gggacgcgat ctggtcacca aggtcgaatt ggcgctcgcc cgcgacggcc
      901 gcctgcttgc catgcgcgcg accaacatca gtaacgtggg cgcctactgt gtctcgcttt
      961 cgccgttgtc caagggcgcg ggcctcatcg tgggccccta tgcgatccct cacgccttcc
     1021 tgcgcgccat ggcggtcttc accaacacca cgccgaccaa tgcatatcgc agctccggcc
     1081 ggccggaggt gacgttcgcg atcgagcgcc ttatcgacac ggcggcagag cgactcggca
     1141 tcgatcgcgt cgaactgcgc cgcaagaacc tcatccgtcc ggaagcgatg ccttaccgca
     1201 atgccgtcgg catgacctat gacagcgggc gctatcagga aagcatggac cgggcgatgg
     1261 agattgcgga ctggaaaggc ttcgagcagc gccgacgcga ggctgcaaag cgcggccggc
     1321 tgctcggccg cggcctcgcc aactacgttg aatcctcgat cggcgcgccg aacgagcagg
     1381 cgcggatcac ggtgcgtccg cagcggcggg tggaagtcgt catcggcacg cagccgagcg
     1441 gacaaggcca cgagacgagc ttcgcgcagg tcatttccga tcttctccgc gtgccggtcg
     1501 agagtgtgaa gatcatcctc ggcgacaccg acgtggtgaa ggtgggcggc ggatcgcatt
     1561 cgggccgctc catgcgccac gccgcgaccg tgttcgcgaa ggcgctcccg gagctcgttg
     1621 cgcggggaaa gaaagtagcc gcagccatac tgcggtcgat accggaccat attgaattca
     1681 gcgacggcag gttcagcgcg cgcgagacca accgcacctt cgattttctc gaccttgccg
     1741 aagaggccgc ccgacacgag ctcccgcagg aactcaagga cggcatcgcc gtggtcaccg
     1801 acaacgagat gcacgatccg gtattcccca acggttgcgc catctgcgag gtcgaggtcg
     1861 acccgcagac cggagacgtg cggatcatcc gctacgcgtc ggtcgatgat gtcggtcgtt
     1921 gcatcaatcc gctgatcgtc gatggccaga cccatggcgc gatcgcgcag ggcgtcgggc
     1981 aggccttgtg ggagcaatgc tacgtcgatc acgattccgg ccagccgctc gtcggttcgc
     2041 tgatggacta cggcgtgccg cgcgcggata ccgtcccgcc gttcgtcacg gaaattgccg
     2101 aggttctttc gccgaccaat ccgctcggca tcaaggccgg cggcgaaggc ggcaccactg
     2161 cagcaccggc ggcggtcatc agcgcgatcc tcgatgcgtt gcgcgactac ggcgtgcgcg
     2221 acatcaagat gccggccacc ccgtataatg tctggaaagc gattgcagac gcgaacgcgg
     2281 acagagaaac cggga
//
LOCUS       DATCWM010000583         6638 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_231147, whole genome shotgun sequence.
ACCESSION   DATCWM010000583 DATCWM010000000
VERSION     DATCWM010000583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6638
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_231147"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..768)
                     /locus_tag="VIQ50_11470"
     CDS             complement(<1..768)
                     /locus_tag="VIQ50_11470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEY9361044.1"
                     /translation="MLGTLAQSVRQSRNEALAVLVAAAVALPALPTSSAARGPDNIAD
                     VSEKVIDAVVNISTSQKIETRNSPLPQLPNDPQLDELFRDFFNRRGQGDPQNRERAPR
                     RVNSLGSGFIIDSSGIVVTNNHVISEADEVTVILNDGSRLKAEIIGRDQKTDLALLRV
                     KPEKPLKAVKFGDSDNLRLGEWVIAIGNPFSLGGSVTAGIVSARNRDINSGPYDNYIQ
                     TDAAINRGNSGGPLFNLDGEVVGINTAIISPSGGSIAI"
     gene            complement(923..1108)
                     /locus_tag="VIQ50_11475"
     CDS             complement(923..1108)
                     /locus_tag="VIQ50_11475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002964504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2065 domain-containing protein"
                     /protein_id="HEY9361045.1"
                     /translation="MAQFVAAIGLLLVIEGLLFAAFPRLAKRLAASALESPETSLRVA
                     GIASAVLGIVLIWIVRG"
     gene            complement(1146..2063)
                     /gene="hflC"
                     /locus_tag="VIQ50_11480"
     CDS             complement(1146..2063)
                     /gene="hflC"
                     /locus_tag="VIQ50_11480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HEY9361046.1"
                     /translation="MRLNLFGGLIAGLVVVALIVAYGTLFTVYQTRQALVVRLGQPVR
                     VITDPGLNVKVPLIDSVINIDKRILDLENPAQEVIASDQKRLVVDAFARYRIKDVLKF
                     YQTVGTVDGANSQLSILLNSALRRVLGEATLTQVVRDQREHLMARVREQLDNEAQGYG
                     ISVVDVRIRRADLPEQNSQAVYQRMQTERQQEAAQYRAEGAQKAQELRAKADRDVTVL
                     LAEAQSKGERTRGEGDGERNRIFADAYGRDPDFFAFYRSMQAYETGLRANDTRMLLKP
                     DSEFFRFFVDPSGKPREGNSSAGSSAPAR"
     gene            complement(2060..3187)
                     /gene="hflK"
                     /locus_tag="VIQ50_11485"
     CDS             complement(2060..3187)
                     /gene="hflK"
                     /locus_tag="VIQ50_11485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007613356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HEY9361047.1"
                     /translation="MPWSNQGGGPWGSGGGSKGPWGSGQPPSGPTPPDLEEFLRRSQD
                     RLRTVLPGGSLGGKGLGLIVLAGIAIWLFSGFFRVDSEEVGVVLRFGKFVREVQPGLN
                     YHLPYPIESVLTPKVTRINKIDIGMRVVEDLRRGTTIRDVPEESLMLTGDENIVDVDF
                     SVLWRISIKPNGVEDYLFNIQQPEGTVKAVAESAMREVIGRSTLQPILTGARQNIESA
                     VQELMQRVLDSYGAGVQIQQVQLQKVDPPSQVIDAFRDVQAARADSERAQNEAQSYAN
                     KVVPEARGRAAQITQGAEAYRDQTVAEAKGATSRFLQVYDEYKKAPDVTRQRMYLETM
                     ERLFGGTDKIILDSGGGVVPYLPLDQLTRRPQNPPQTGGSR"
     gene            complement(3324..3890)
                     /locus_tag="VIQ50_11490"
     CDS             complement(3324..3890)
                     /locus_tag="VIQ50_11490"
                     /EC_number="1.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004146 - dihydrofolate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HEY9361048.1"
                     /translation="MSEPRAGSRIEIVLVAALADNDVIGRGGALPWRLKSDMQRLRDI
                     TWGKPVVVGRTTFLSFTRKPLPGRTNIVLSRSKSFAAPGTLVASRLDAALEAARGDAL
                     RRGVATIIVLGGADVYAQTMPVADRLLITRVHLKADGDTSFPPIDPDLWRETERNEHP
                     AGPDDDASYTTFDYERHATPFESPQGRS"
     gene            complement(3887..4681)
                     /locus_tag="VIQ50_11495"
     CDS             complement(3887..4681)
                     /locus_tag="VIQ50_11495"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004799 - thymidylate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006231 - dTMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HEY9361049.1"
                     /translation="MRQYLDLIERILADGSEKHDRTGTGTLSVFGHQMRFDLAQGFPL
                     TTTKKLHLRSIVHELLWFLAGDTNVKYLNEHGVTIWNEWADESGELGPVYGRQWRSWP
                     TSDGGVIDQIAEVAAAIRRNPDSRRLIVTAWNPADVDKMALPPCHCLFQFYVAKGRLS
                     CQLYQRSADVFLGVPFNIASYALLTLMVAQVTGFKPGEFVHTLGDAHLYSNHLEQARL
                     QLSRVPRPLPRMTLNPAVSDLFAFRYEDFSLHGYDPYPHIKAKVAV"
     gene            complement(4782..5768)
                     /locus_tag="VIQ50_11500"
     CDS             complement(4782..5768)
                     /locus_tag="VIQ50_11500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018640852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9361050.1"
                     /translation="MRPIVSRALAAVVALGFAAGPAAAQTDDHPRRPITLIVPFAAGG
                     PTDVISRIISDHMSRTLGQSIVIENMLGAGGTTASTRAARATPDGYTIEMGHMGTHAA
                     SVALYPNLAYKPDVDFAPIGLVAGTPVLILAKKDFPPGDLKEFVTYVKGNIETLNMAH
                     AGVGSVSFTTCLLLNSILGVKPTSVPFNGTGPALTALIAGQVDYMCDQIVNVVQQVLA
                     GQIKAYAIGTPERSPALPNVPTSQQAGLPQFQAQAWNALFAPKDTPQPVLDKLTAALD
                     KALDDEHTRARLLELGSVLPGKGERGQQALAVLVKREIERWTPIIKAAGPTN"
     gene            complement(5896..>6638)
                     /locus_tag="VIQ50_11505"
     CDS             complement(5896..>6638)
                     /locus_tag="VIQ50_11505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEY9361051.1"
                     /translation="ARGTLLGSLVGILPGGGAVIASFAAYTFEKKIAKDPSRFGRGAI
                     QGVAAPESANNAAAQTSFIPLLTLGIPPNAVMALMVGAMTIHGIVPGPQVMTKQPELF
                     WGMIASMWLGNLMLVVINLPLVGLWVTLLRVPYRLLYPSIIVFCCIGIYSINNSPTDV
                     TIAAIFGVVGYWLVKHDFEPAPLLLGFVLGPLMEENLRRAMLIARGDVTVFFTRPISA
                     VLLSTAIVLLVIAGLPKIRRRRDEVFVE"
BASE COUNT         1158 a         2091 c         2213 g         1176 t
ORIGIN      
        1 gatggcgatc gaaccgccgg agggagagat gatcgcggta ttgatgccga ccacctcgcc
       61 gtcgaggttg aacagaggac cgcccgagtt gccgcgattg atggcggcat cggtctgaat
      121 gtagttgtcg taggggccgg aattgatgtc gcggttgcgc gcggagacga tgccggccgt
      181 caccgagccg ccgagactga acgggttgcc gatggcgatg acccattcgc ccagccgcag
      241 gttgtcggaa tcgccgaatt tgaccgcctt gagcggcttc tccggcttga cccgaagcag
      301 cgcgaggtcg gtcttctgat ctctgccgat gatctccgcc ttgagccgcg aaccatcgtt
      361 gagaatgacg gtgacttcgt cggcctccga gataacgtga ttgttggtga cgacgatacc
      421 ggaggagtcg atgatgaagc cggaacctag cgaattaacg cggcgcggag cgcgctcgcg
      481 attctgcggg tcgccttgac cgcggcgatt gaagaagtcg cggaagagct cgtccagttg
      541 cgggtcgttg ggcagttgcg gcagcgggga gttgcgcgtt tcaatcttct gcgaggtgga
      601 gatattgacg accgcgtcga ttaccttctc ggagacatcg gcgatgttgt cgggtccacg
      661 cgcggcggac gaggtcggca gcgccggcaa ggccactgcc gccgcaacga gaacggccaa
      721 ggcttcattg cgggactgcc ggacagattg agcaagcgtg ccgagcatgg aagtctgagc
      781 tcctgcggtc gtgaagggcg aaacagtgct cccgtccggt gatggacgca agggcgatct
      841 cgcggcggca attacgcttg ggattagggc ggaatcggga ccgcagcgcg gctgcgccgc
      901 cgcgtaaagt gcgcgcgccg actcacccgc gcacgatcca gatcagcacg atgccgagca
      961 cggcggaggc gatgccggcg acacgcagcg acgtttccgg gctctccagc gcgctcgccg
     1021 ccagccgttt tgcgaggcgg gggaaggccg cgaaaagcag gccttcgatg acgagcaaca
     1081 ggccgatcgc ggcgacgaac tgggccatct ttgcctaacc ggcgcagtgg tggcgaaggc
     1141 cgccgttacc tcgcaggcgc tgaggagccc gccgaagagt taccttcgcg cggcttgccc
     1201 gatggatcca cgaagaaccg gaagaattcc gaatcaggct tgagcagcat gcgcgtgtca
     1261 ttggcacgca gcccagtctc gtaggcttgc atcgaacggt agaacgcgaa gaagtcggga
     1321 tcgcggccgt aggcatcggc gaaaatgcga ttgcgctcgc catcgccttc gccgcgcgtg
     1381 cgctcgccct tcgattgcgc ctcggccagc agcaccgtga cgtcgcgatc cgccttggcg
     1441 cggagctcct gcgccttctg cgcgccctcg gcgcggtatt gcgccgcctc ctgctgccgc
     1501 tcggtctgca tgcgctgata gaccgcctgg ctgttctgct ccggcaagtc ggcacggcga
     1561 atgcgaacgt cgacgacgga gatgccgtaa ccctgcgcct cattgtcgag ttgctcgcgc
     1621 acgcgcgcca tcagatgctc gcgttgatcg cgcaccacct gcgtcaacgt cgcctcgccc
     1681 agcacgcggc gcagcgccga attgagcaag atcgaaagct gcgagttcgc gccgtccacg
     1741 gtgcccacgg tctgatagaa cttcagcaca tccttgatgc gatagcgcgc gaaggcgtcg
     1801 accacgagcc gcttctggtc ggaggcgatc acctcctgcg ccgggttttc gagatcgagg
     1861 atgcgcttgt cgatgttgat gacgctgtca atgagcggca cctttacgtt cagtccgggg
     1921 tcggtgatga cgcgcaccgg ctgccctagc ctcaccacca gcgcctggcg ggtctgatag
     1981 accgtgaaca gcgtgccgta ggcgacgatc agcgccacga cgacgaggcc ggcgatgagt
     2041 ccgccgaaca gattgagtct catcggctgc cccccgtctg cggcgggttc tgcggccgac
     2101 gcgtcaactg gtcgagcggc aggtagggaa cgaccccgcc ccccgaatcg aggatgatct
     2161 tgtcggtgcc cccgaacaac cgttccatgg tttcgagata catgcgttgg cgggtgacgt
     2221 cgggcgcttt cttgtattcg tcgtagacct ggaggaagcg cgacgtcgcg cccttggcct
     2281 cggcgacggt ttggtcgcgg taggcttcgg cgccctgagt gatctgcgcg gcgcgtccgc
     2341 gcgcttccgg cacgaccttg ttggcatagc tctgggcttc gttctgcgcc cgctcgctgt
     2401 cggcgcgggc cgcctgcacg tcgcggaacg cgtcgatcac ctgcgacggc gggtccactt
     2461 tctgcagctg cacttgctgg atctggacgc cggctccgta actatcgagc acgcgttgca
     2521 tcagctcctg caccgcggat tcgatgttct gccgcgcccc ggtcagaatg ggctgcagcg
     2581 tcgaacggcc gatcacctcg cgcatggcgc tctcggccac cgccttcacc gtgccttcgg
     2641 gttgctgaat gttgaagaga tagtcttcga cgccgttcgg cttgatgctg atgcgccaca
     2701 acacggagaa gtcgacgtcg acgatgttct cgtcgccggt gagcatcagg ctctcctccg
     2761 gcacatcgcg aatggtcgtt ccgcggcgca ggtcctccac cacgcgcatg ccgatgtcga
     2821 tcttgttgat gcgcgtcacc ttcggagtga gcacgctctc gatcggatac ggcaggtggt
     2881 aattgagccc cggctgcacc tcgcgcacga atttgccgaa gcgcaaaacg acgccgactt
     2941 cctcgctatc aacgcggaaa aagccggaga acaaccagat cgcgatcccg gcaagcacga
     3001 tcagtccgag ccccttgccg ccgaggctgc cgcccggcag caccgtgcgc aacctgtcct
     3061 ggctgcggcg gagaaattcc tcaagatcgg gcggcgtcgg accggacgga ggctgtcccg
     3121 agccccaagg acctttgctg ccgccgcctg atccccacgg cccgccgccc tgattgctcc
     3181 acggcattgg cttgcctcct cactctatcg gcccaagggc cggcgcgccc gctgcggttg
     3241 ggtgggttat aggggaggcg tcactgcgtt acaacgcggg tgagccgcgt gcggcgccac
     3301 ggcgcatggc cttgaatttc cggtcagctc cttccttgcg gcgactcgaa aggcgtggcg
     3361 tgccgttcat agtcaaacgt ggtgtagctc gcgtcgtcgt ctgggccggc aggatgttcg
     3421 ttccgctccg tttcccgcca gagatcagga tcgatcggcg gaaagctcgt atcgccgtcc
     3481 gccttgaggt gcacgcgcgt gatcagcaag cggtcggcga caggcatggt ctgcgcataa
     3541 acgtcggctc cgcccagcac gatgatcgta gcgacgccgc gtcgcagcgc gtcaccgcgc
     3601 gccgcctcca gcgcggcatc gagcctcgac gccaccagcg tgcccggcgc ggcgaagctc
     3661 ttgctgcggc tgagcacgat attggtgcgg ccgggaagcg gtttcctggt aaaggagaga
     3721 aacgtcgttc gccccaccac gaccggcttg ccccacgtga tgtcgcgaag gcgctgcatg
     3781 tccgacttga gccgccacgg cagcgcgccg ccgcggccga tcacgtcatt gtcggcgagc
     3841 gcggcaacca ggacgatctc gatgcgcgat cccgcgcgcg gctcgctcac accgcgacct
     3901 tggccttgat gtgcggatac ggatcgtaac cgtgaagcga gaaatcctcg taacggaagg
     3961 caaagagatc gctcacggcg ggattgagcg tcatccgcgg caacggtcgc gggacgcgcg
     4021 agagctgcag ccgcgcctgc tccaggtgat tgctataaag atgcgcgtct cccagggtgt
     4081 gcacgaactc gccgggtttg aatccggtca cctgcgccac catcagcgtc aacaacgcgt
     4141 aagaggcgat gttgaagggc acgccgagga acacgtcggc cgagcgctga tagagctggc
     4201 acgacagccg acccttggcg acgtaaaact ggaacaggca gtggcatggc ggcagcgcca
     4261 tcttgtcgac gtcggccgga ttccacgctg tcacgatcaa gcggcgcgag tcgggattgc
     4321 ggcggatggc ggcagccacc tcggcgattt ggtcgatcac gccgccgtcg gaagtaggcc
     4381 acgagcgcca ttgccgcccg tagaccggac ccagctcgcc gctctcgtcc gcccactcgt
     4441 tccagatcgt cacgccatgt tcgttgagat atttgacgtt ggtgtcgccg gcgaggaacc
     4501 agagtaactc gtgcacgatc gatcgcaggt gcagcttttt ggtggttgtg aggggaaagc
     4561 cctgggcgag atcgaaccgc atctggtgac cgaacaccga gagcgtgccg gtcccggtgc
     4621 ggtcgtgctt ctccgagccg tcggcgagga tgcgttcgat caagtcgaga tattggcgca
     4681 tggctgcggt cctcaggcgg cgaaagaccc gagtcggacg gcggagtgta ccgccctccc
     4741 gcttgccggc aaatgtgcag agcgccttgt gaatatacgc gtcagttggt cgggccggcc
     4801 gccttgatga tcggggtcca gcgctcgatc tcgcgcttga ccaacaccgc gagcgcctgc
     4861 tggccgcgct cgcccttgcc cggcagaacg ctcccgagct ccagcagacg cgcgcgggtg
     4921 tgctcgtcgt cgagcgcctt gtccagcgcg gcggtgagct tgtcgaggac gggctggggc
     4981 gtatctttcg gggcgaacag ggcattccag gcttgcgcct gaaactgcgg cagccctgcc
     5041 tgctggctgg tcggcacgtt gggcagcgcc ggactgcgct cgggcgtgcc gatcgcatag
     5101 gccttgatct gcccggccag cacctgctgc acgacgttga cgatctggtc gcacatgtaa
     5161 tcgacctgtc cggcgatcaa ggccgtcagc gccgggccgg ttccgttgaa gggcacggac
     5221 gtcggcttta cgccgaggat cgagttgagc agcaagcagg tcgtgaacga caccgatccg
     5281 accccggcgt gggccatgtt gagggtctcg atgttgccct tcacataagt cacgaactcc
     5341 ttgaggtcgc ccggcggaaa atccttcttc gccagaatca ataccggcgt gccggccacc
     5401 aggccaatgg gcgcaaaatc cacatcaggt ttgtaggcga ggttcggata gagcgcgacc
     5461 gaggcagcgt gggttcccat atgacccatc tcgatcgtgt agccgtcggg ggtggcgcgc
     5521 gccgcccgcg tcgaggcggt cgtgccgccg gcaccgagca tgttctcgat gacgatggac
     5581 tggccgagcg tgcgagacat gtgatcgctg atgatgcggg agatcacgtc ggtcggcccg
     5641 ccggcggcaa acggcacgat caaggtaatc gggcgtcgcg gatggtcgtc ggtctgcgcc
     5701 gcagcggggc cggcggcaaa gccgagcgcg acaaccgcgg caagcgcgcg agatacgatg
     5761 ggacgcatgg ttcgtttcct ctttgtgacg ttcttctttt tggctgatca atgccgtgca
     5821 aatgctatca ccgaagggcg gcgactcgac gtcttggcgc cggggtaact tgtcgcagcc
     5881 ggcctgcggc ctggtctatt cgacgaacac ctcgtcgcga cgccggcgaa ttttggggag
     5941 cccggcgatg accagcagga cgatggccgt gctcagcagc accgccgaga tcggacgcgt
     6001 gaagaacacc gtgacgtcgc cgcgggcgat cagcatggcg cgacggagat tctcctccat
     6061 cagcggtccc agcacgaatc caagcagcag gggcgcgggc tcgaaatcgt gcttcaccaa
     6121 ccagtagccg accacgccga agatcgcagc gatcgtcaca tcggtcggcg agttgttgat
     6181 ggagtagatg ccgatgcagc agaacacgat gatggacggg tagagcagcc ggtagggcac
     6241 gcgcaacagg gtgacccaca gccccaccag cggcagattg atgacgacca gcatcagatt
     6301 gcccagccac atcgaggcga tcatccccca gaacagctcg ggctgcttgg tcatgacctg
     6361 cgggcccggc acgatgccgt ggatggtcat ggcgccgacc atcagcgcca tcaccgcgtt
     6421 gggcgggatt ccgagcgtaa gcagcggaat gaacgaggtc tgcgccgccg cgttgttggc
     6481 gctttccggc gcggccacgc cttggatggc gccgcgaccg aatcgcgatg ggtccttggc
     6541 tatctttttc tcgaaggtgt aggcggcaaa cgaggcgatc accgctccgc cgcccggcaa
     6601 gatgccgacc agcgatccca gcagtgtgcc acgcgcga
//
LOCUS       DATCWM010000584         2246 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_58173, whole genome shotgun sequence.
ACCESSION   DATCWM010000584 DATCWM010000000
VERSION     DATCWM010000584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2246
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58173"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1281
                     /locus_tag="VIQ50_11510"
     CDS             <1..1281
                     /locus_tag="VIQ50_11510"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEY9361052.1"
                     /translation="GADTKRTDKFATEGIKLTHYVVEPQCTPTRSALMTGRYPIRSGN
                     HTIALGGNAGGIVRWEKTIAEILATAGYVSCCLGKWHIGAEDGRWPTDHGFDEWYGPL
                     RTYDECMWLEDPHYVPERDGYSHMHEGRKGKGVKPIPSQQLTMEMKKTCDLEYQKRGL
                     DFMQRSVSAGKPFFLYFNHSLMHFPMLPRDEFVGKSTNGEWGDCLLMLDHDFGVLLDK
                     LDELGIADNTIVVYCGDNGAEDHLVGRGTGGFFDGSYFSSAEGGIRTPFLMRWPGRIK
                     PGTESNEMVHVTDMFTTLLRLAGCEPPRDRIIDGVDQAPFFLGRQETSNRDACMVWLN
                     EELHAIKWKDFKINFKRQQHFHDPELPLGFARITHLKEDPKEREPVNQRYVRWWVMQH
                     AHRVVREFEESKKREELIPTGSPLDFVPKPYARA"
     gene            1356..>2246
                     /locus_tag="VIQ50_11515"
     CDS             1356..>2246
                     /locus_tag="VIQ50_11515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formylglycine-generating enzyme family protein"
                     /protein_id="HEY9361053.1"
                     /translation="MIVAPSAEKLHEADVDRRSMIWIPGGTFLMGSDRFYREERPARR
                     ETVQGFWVDRYPVTNAEFRTFVRATGYVTTCERPPDPAMYPDADPALLVPGSSVFRKP
                     RGPVDLRDNRAWWEYLPGADWRHPQGPGSSIDGRDDHPVVHVAYADACAYAAWAGKEL
                     PDESEWEFAARGGLDGATYAWGEAFAPQGRAMANTWQGRFPWENLELDGYDGTSPVDA
                     FPANGYGLYDMIGNVWEWTATPFTLHGAEGAKKSCCAPDERGGAAPHRVVKGGSHLCA
                     PNYCLRYRPAARQGEAVDTST"
BASE COUNT          432 a          702 c          726 g          386 t
ORIGIN      
        1 ggagcggaca ccaagcgcac ggacaagttc gccaccgagg gtatcaagct gacgcattac
       61 gtcgtcgagc cacaatgcac gccgactcgt tcggccttga tgacgggacg ctatccgatc
      121 cgctccggca accacaccat tgctttgggc ggcaacgcgg ggggcatcgt gcgatgggag
      181 aaaaccatcg ccgaaatcct ggccacggcc ggctacgttt cgtgctgcct gggcaagtgg
      241 catatcgggg cggaagacgg ccgctggccg acggatcacg gcttcgacga atggtacggc
      301 ccgcttcgca cctacgacga atgcatgtgg ctcgaagatc cgcactacgt tccggagcgc
      361 gacggctact cgcatatgca cgagggccgc aagggcaaag gcgtaaagcc gatcccgtcg
      421 caacagctca ccatggaaat gaagaagacg tgcgacctcg aatatcagaa acggggtctt
      481 gatttcatgc agcgcagcgt atcggcgggc aagccgttct ttctctattt caatcattcg
      541 ctgatgcact tcccgatgct gccgcgcgac gaattcgtcg gcaaaagcac caacggcgaa
      601 tggggggatt gcctgttgat gctcgaccac gacttcggcg tgttgctcga caagctcgac
      661 gagctgggca tcgccgacaa caccatcgtt gtctactgcg gcgacaacgg cgcggaggat
      721 cacttggtcg ggcggggaac gggcggcttt ttcgacgggt cgtatttcag ttcggcggaa
      781 ggtggcatcc gcacgccatt cctgatgcgc tggccgggcc gcatcaaacc ggggaccgag
      841 agcaatgaaa tggttcacgt gaccgacatg ttcacgacct tgctacgatt ggcgggatgt
      901 gagccgccgc gcgatcgaat catcgacggc gtcgatcagg ctccgttctt tctcggcagg
      961 caggaaacct cgaaccggga cgcatgcatg gtgtggctca acgaggagct gcacgcgatc
     1021 aaatggaaag acttcaagat caacttcaag cgccagcagc acttccacga cccggaactg
     1081 ccgctgggct ttgcccgcat cacccatctc aaggaggacc cgaaggagcg tgagcccgtc
     1141 aaccaacgct acgtgcgctg gtgggtgatg cagcacgcgc accgcgtcgt gcgggagttc
     1201 gaggaaagca aaaagcgaga agagctgatc ccgaccggat cgccgctcga tttcgtgccg
     1261 aagccctacg cgcgcgccta aggccgttat gtggaaggcg atcagtccag ccgcggactt
     1321 ggtcctcctg tatgggaggc ggatggtccg gtgacatgat cgtggcgccc tccgcggaga
     1381 aattgcacga agccgacgtc gaccgccgct ccatgatctg gattccgggc ggcacgttcc
     1441 tcatgggctc ggatcggttc taccgcgaag agcgcccggc gcgccgggag acggtgcaag
     1501 gattctgggt cgacagatat cccgtgacca acgccgagtt tcgcacattc gtgcgcgcga
     1561 ccggttacgt cacgacctgc gagcgcccgc ccgatcccgc tatgtatccc gacgccgacc
     1621 ccgcgctgtt ggtgccgggc tcctcggtat ttcgcaagcc gcgcggcccg gtggacctgc
     1681 gcgacaaccg cgcctggtgg gaatacctcc ccggggcgga ttggcggcac ccccagggtc
     1741 ccggcagcag catcgacggc cgggatgatc accccgtcgt tcacgtcgcc tacgcggatg
     1801 cgtgcgccta cgccgcctgg gccgggaaag aattgccgga cgaatccgag tgggaattcg
     1861 cggcccgcgg cggtctcgac ggcgcgacct acgcctgggg cgaagcgttt gctccgcagg
     1921 gccgcgccat ggccaacacc tggcagggcc gcttcccgtg ggagaatctc gagctcgacg
     1981 gctacgatgg cacctctcca gtcgatgcct ttcccgcgaa tggctatggg ctttacgaca
     2041 tgatcggcaa tgtgtgggag tggacggcga cccctttcac gttgcacggc gctgaaggtg
     2101 caaaaaaatc ctgttgcgcg ccggacgaac gcggcggcgc ggctcctcac cgggtggtga
     2161 agggcggctc gcatctgtgc gcgcccaatt actgtctgcg ctaccggccg gcggcgcgcc
     2221 aaggcgaggc ggtcgatacc tcgacc
//
LOCUS       DATCWM010000585         3192 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_522532, whole genome shotgun sequence.
ACCESSION   DATCWM010000585 DATCWM010000000
VERSION     DATCWM010000585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3192
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_522532"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..183)
                     /locus_tag="VIQ50_11520"
     CDS             complement(<1..183)
                     /locus_tag="VIQ50_11520"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY9361054.1"
                     /translation="MRNGSEARVSASLDVRDLRKQFAAGRPAVDGVSFHVPAGEIVVL
                     LGPSGCGKTTTLRCIAG"
     gene            complement(197..1210)
                     /locus_tag="VIQ50_11525"
     CDS             complement(197..1210)
                     /locus_tag="VIQ50_11525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEY9361055.1"
                     /translation="MKSKLTALAVMSVIAVPATAQDFGPPELIAAAKKEGKLVYYTAN
                     FAEVEQEVIKAFNKRFPEIKVEMVRAPGGQLITRVKTEAAAGKLTADVVDHSDRALMI
                     DLVGLFQDYAPPNGKDYLPDSLISPKLWPRVTLAWSIAYNSALVKNPPKSWIDLTKPE
                     YGNRQIGEVIAPSGGTTWTRIMFERQVLGEDYWKKQAATNPILYPSGAPMSDALVRGE
                     IAIGPLLYNIVYPKKRDGAPLEIFFAPEGAPVNPYASGVPSTAKNPNAAKLFLNWCLS
                     VEGQAFMIKELGNLTSLRQPPIYPEGFDPKVVKVWLPNFDQYVKLHASWVEGWNKIYG
                     YRQ"
     gene            complement(1239..3014)
                     /locus_tag="VIQ50_11530"
     CDS             complement(1239..3014)
                     /locus_tag="VIQ50_11530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEY9361056.1"
                     /translation="MTADAAAVAAPAAKAKRGARLGIVAGWLWSAALLVLLGFLVLYP
                     VAMLLLGALTNTNPVVDGFGVFDLSLANFVRVLANPNVHLALANSLIACAGGTALAVV
                     IGLAFSWIVVRTNTPWRGFVAAVSLIPLFVPPLVAGVAWSILGSPKSGLINTMLGWAG
                     LTWRIDLYSMTGLILVFGMYYAPYVYMFTASALRNMDPSLEEAAEITGVSPLRTLFTV
                     TFPLIAPAIVSGMLLSFIVMLGIYGIPAVLGAPADIPVLTTYIFKLTNWSPPLYSTAA
                     AVAIILMVVTGALVVLQQRVLAGRSFTTVSGKAFRPRVIELGPWRWFTFGLALVYLVT
                     VVVLPTLALIVAAFRRFLFIPNAASLVDMRHYSLVHFDSVFDNPLTMRSIWNTMEVGL
                     ATAILGGIIAFAIGYTVHRSSAPARRGIDLIATLPVAIPGLVIGVAYLWAWIGLPGGL
                     YGTIWILVLAFVARFMPDTMKALSTSFLQIHRELEEAAWVCGKGRIATIRTIVLPLAR
                     PGTVAAMTLLFILAIRELGSSLFLYTSDTMVMAVLLLDYYEGGNTGKAAAFSLVQTIL
                     LAAVIGVAGWISRGRDTQASVGRAG"
BASE COUNT          642 a          989 c         1036 g          525 t
ORIGIN      
        1 accggcgatg cagcgcagcg tggtggtctt gccgcagccg gagggaccga gcagcaccac
       61 gatctcgccg gccggtacgt gaaagctcac cccatccacg gcgggccggc cggcggcgaa
      121 ttgcttgcgc agatcgcgga cgtcgaggga agcagacacg cgcgcctccg agccgttccg
      181 catcgagctt agcgctctac tgccgataac cgtaaatctt gttccaaccc tcgacccagg
      241 acgcgtgcag ttttacgtat tgatcaaagt tcggcaacca caccttgacc accttcggat
      301 cgaaaccttc cggatagatc ggcggctggc gcagtgatgt caggtttcca agttccttga
      361 tcatgaaggc ctggccttcc accgacaggc accagttgag gaacagcttc gcggcgttgg
      421 ggttcttcgc cgtcgacggc acaccgctgg catacggatt gaccggcgcg ccttcgggcg
      481 caaaaaagat ctcgagcggg gcgccgtccc gcttcttggg atagacgatg ttgtacagca
      541 gcggacctat cgcgatctcc ccgcgcacca gcgcatccga catcggcgcg ccggacggat
      601 agagtatcgg gttggtcgca gcctgtttct tccaatagtc ctcgcccagc acctgacgct
      661 cgaacatgat ccgcgtccag gtcgtgccgc cggaaggcgc gatgacctcg ccgatctgcc
      721 tgttgccgta ttccggcttg gtcagatcga tccagctctt cggcgggttt ttcaccagcg
      781 ccgaattgta ggcaatcgac cacgccagcg tgacgcgcgg ccacagcttc ggcgaaatca
      841 gcgagtcggg cagatagtcc ttgccattcg gcggcgcgta atcctggaac aggccgacga
      901 gatcaatcat gagcgcgcga tcggaatggt cgaccacgtc ggcggtgagc ttgccggcgg
      961 cggcttcggt tttcacgcgg gtgatgagct gcccgccggg ggcacgcacc atctccacct
     1021 tgatctcggg aaagcgcttg ttgaaggcct tgatcacctc ctgctcgacc tcggcgaagt
     1081 tggcggtgta gtagacgagt ttgccttcct tcttcgccgc ggcgatcagt tcgggcggcc
     1141 cgaaatcttg tgcggtcgcc ggaaccgcga tcacgctcat gactgcaagc gcggtcaact
     1201 tcgatttcat ggcgacgttc ctcctgttgt cacgctcatc accccgcccg gccaacgctg
     1261 gcctgcgtat cgcgcccgcg cgatatccaa ccggcaacgc cgatcaccgc ggcgagcagt
     1321 atcgtctgta ccaggctgaa ggcggccgct tttcctgtgt tgccgccttc gtaatagtcg
     1381 agcagcagca ctgccatcac catcgtgtcg ctggtgtaga gaaaaagcga agagccgagc
     1441 tcgcggatgg caaggatgaa caacagtgtc atggccgcga ccgtgccggg ccgcgccagc
     1501 ggcagcacga tggtgcggat ggtggcgatg cggcccttgc cgcagaccca ggccgcctct
     1561 tcgagctcgc gatgaatctg caggaaagac gtggagagcg ccttcatggt gtcgggcatg
     1621 aatcgcgcga cgaaggcgag aacgagaatc cagatcgtgc cgtatagccc gccgggcaat
     1681 ccgatccacg cccacagata ggcgacgccg atcaccaggc ccgggatcgc caccggcagc
     1741 gtggcgatga ggtcgatccc gcgtcgcgcg ggtgcgctgc tgcggtggac ggtatagccg
     1801 atggcgaagg caatgatccc gccgaggatc gcggtcgcca agcccacctc catggtgttc
     1861 cagatcgagc gcatagtgag cgggttatcg aacactgagt cgaaatgcac tagcgagtaa
     1921 tgtcgcatgt cgaccaggct ggcggcattg ggaatgaaca ggaagcggcg aaacgcagcg
     1981 acgatcagcg caagcgtagg cagcacgacc acggtgacga gatagacgag tgccaagccg
     2041 aaggtgaacc agcgccaggg tccgagctcg atgacgcgcg gccggaatgc cttgccggaa
     2101 accgtcgtga agctgcggcc ggcaaggacg cgctgctgca acaccaccag tgcgccggtc
     2161 accaccatca ggatgatcgc gaccgcggcg gccgtgctgt aaagcggcgg cgaccagttg
     2221 gtcagcttga aaatgtacgt cgtcagcacg gggatgtcgg cgggcgcgcc gagtaccgcc
     2281 gggatgccgt agatgccgag catgacgatg aaggacagca gcatgccgga aacgatcgcc
     2341 ggcgcgatca gcggaaacgt aaccgtgaac agcgtgcgca ggggactgac gccggtgatt
     2401 tccgccgcct cctcgagact cggatccatg tttcgcagcg ccgaagcggt aaacatgtag
     2461 acgtaaggcg cgtagtacat gccgaacacg aggatcagtc cggtcattga atagagatcg
     2521 atgcgccaag taagcccggc ccatcccagc atggtgttga tgaggccgga tttcggcgac
     2581 cccaggatcg accaggcgac gcccgcgacc agcggcggca cgaacagcgg gataagactg
     2641 acggcggcga cgaagcctcg ccatggcgtg ttagtgcgca cgacgatcca ggaaaaagcg
     2701 agcccgataa ccaccgcaag cgcggtgccg ccggcgcagg cgatcagcga atttgccaat
     2761 gcgaggtgga cattgggatt ggcgagaacg cggacgaaat tggcgagcga cagatcgaac
     2821 acgccgaacc catccaccac cggattggtg ttggtgagcg cgccgagaag gagcatggcg
     2881 accggataga ggacgagaaa tccgagcagc acgagcagcg cggccgacca caaccagccg
     2941 gcgacgatcc ctaggcgtgc tccgcgcttg gcctttgcag cgggcgcggc aactgccgcg
     3001 gcgtctgccg tcacgcttcc ctccggcgac ccccggcgcc gcgttgcggc gcctcttatc
     3061 gttgccgcat gggtagcata gaacgtggcg ggcggggagc catcagaacc ggcggcaagc
     3121 ggcgatggat tgctcctgga tttgcgggac gcacacacgc cggtgcgttc gtccaatcag
     3181 ccccatgcgt gc
//
LOCUS       DATCWM010000586         3080 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_204281, whole genome shotgun sequence.
ACCESSION   DATCWM010000586 DATCWM010000000
VERSION     DATCWM010000586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3080
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204281"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(206..628)
                     /locus_tag="VIQ50_11535"
     CDS             complement(206..628)
                     /locus_tag="VIQ50_11535"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEY9361057.1"
                     /translation="MPTPSWTVSFTMPTASNSPAKACAGHEANRTRRLDQPPSPVTQI
                     HRPARLATRAASFRYGGRHHSGIPGDIIPLYPGDFVGIRNLIWPAPDIISLCSYSMAL
                     KPGDIIMTGTPEGVGPVQRGEVMTGGIDGLGEIRISVA"
     gene            complement(525..1271)
                     /gene="istB"
                     /locus_tag="VIQ50_11540"
     CDS             complement(525..1271)
                     /gene="istB"
                     /locus_tag="VIQ50_11540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012706223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HEY9361058.1"
                     /translation="MLRHPTLDQLHALGLHGMAKAFAEITAGGEADGLGHHEWLGLLL
                     DREASWRQDKRLAARLRVAKLRQQACVEDVDYRNPRGLDRTLFQKLAEGEWINAHDNL
                     ALIGPTGVGKSWLASALGHKACRDNRSVLYQRVPRLFEALALGRGDGRHPRLLRNLGR
                     ADLLILDDWGLEPLDAAARHDLLEILEERYGRRSTMITSQLPVDRWHEIIGDPTYADA
                     ILDRLVHNAHRIELAGESMRRTRGKQNQKA"
     gene            complement(1283..2812)
                     /gene="istA"
                     /locus_tag="VIQ50_11545"
     CDS             complement(1283..2812)
                     /gene="istA"
                     /locus_tag="VIQ50_11545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011427313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HEY9361059.1"
                     /translation="MRQVREIIRLKFSAGISTREIARRLGIAASTVRETLRRFEGAGL
                     GWPLPDSMSDGDLEAALYANHGTKRGHRRHAEPDWPTVHRELKRKHVTLVIVWDEYIA
                     ANPGGYSYSRFCELYRGFESKLSPTMRQTHAAGERLFVDYAGDGVPVVIDRLTGEIRK
                     AQIFVAVLGASSFTFAHASWTQALPDWIDAHVRALEVIGGVPHLLVPDNTKTAVIKAC
                     LYDPQVNRTYAEMAAHYDTAILPARPRRPRDKAKVEQAVLIVERWLLGRLRHRTFYSL
                     AEVNAAIGELMTHLNEERPIRRLGVTRRQLLEQIDRPALKSLPSEPYEFSEWRMRRVG
                     IDYHIEVAAHYYSVPHRFARAEVDARLTARTVEIFLKGERIAAHMRMSGNHKHTTVAE
                     HMPSSHRRYAGWTIERIRADARLIGPATVALCELILEHRSHPEQGFRACLGIVRLARP
                     YGTGRLEAAANRAIEIGARTYGSVKSILDNHLDRRPAQKRATDGTPILHSNIRGPRYY
                     N"
BASE COUNT          557 a          937 c          989 g          597 t
ORIGIN      
        1 aggccaaccg aagtcgttcc actgcggatc aagagctgaa agcaggagtg gctcacccac
       61 caactaagaa accccttcaa gcggtctcgc tgcgcgggtc catttcagca tgacacgccg
      121 cgagcgcgcc caactaaatc atgcagttcc tactcgtact taatctgtcg gaggggattg
      181 ttttggttca ggactgcgat ctgagctatg ctaccgagat ccttatctcg cccagcccat
      241 cgatccctcc ggtcatcacc tctccgcgct gcacggggcc cacgccttct ggcgtgccgg
      301 tcatgatgat atccccgggc ttcaacgcca tcgagtagga gcagagtgag ataatgtccg
      361 gcgcgggcca gatcagattg cggattccga cgaagtcgcc cgggtataat gggatgatgt
      421 cgcccgggat tcctgaatga tgtcgcccac cgtaacggaa tgatgccgcc cgggtcgcga
      481 gcctcgctgg ccgatggatt tgtgtcaccg gcgatggtgg ttggtcaagc cttctggttc
      541 tgtttgcctc gtgtccggcg catgctttcg ccggcgagtt cgatgcggtg ggcattgtga
      601 acgagacggt ccaagatggc gtcggcatag gtcggatcgc cgattatttc gtgccatcgg
      661 tctactggaa gctgggaggt aatcatcgtg gagcggcgtc cgtagcgttc ctcgaggatt
      721 tccagaagat cgtgacgggc ggcggcgtcg agcggctcca agccccagtc atcgagaatg
      781 agcagatcgg cgcggcccag gttgcgcaga agacgcggat ggcgtccgtc gccacgcccc
      841 agggcgaggg cctcgaagag ccggggcacg cgttgataga ggaccgagcg gttgtcgcga
      901 cacgccttgt ggccgagcgc cgaggccagc cagctcttgc cgacgccggt tgggccgatg
      961 agcgccagat tgtcgtgggc gttgatccat tcgccctccg ccagtttttg gaacagggtg
     1021 cggtcaagac cgcggggatt gcgatagtcg acgtcttcga cgcaggcctg ctggcgcaat
     1081 ttggcgacgc gcagccgcgc cgcgaggcgc ttgtcctgtc gccatgatgc ttcgcgatca
     1141 agcaggagcc ccagccattc gtgatggccg aggccgtcag cttcaccgcc ggccgtgatc
     1201 tcggcgaagg ccttggccat gccatgcagg ccaagggcat gaagttggtc gagggttgga
     1261 tgtctgagca agttcgtctc tcctaattgt agtagcgcgg accacggatg ttggaatgca
     1321 gaatcggcgt tccgtccgtg gcgcgctttt gcgcggggcg ccgatcgaga tggttgtcga
     1381 gaatggattt gaccgaaccg taggtacggg cgccgatttc gatggcgcgg ttcgccgccg
     1441 cctcgagacg cccggtgcca tacgggcggg ccagccgaac gatccccaga caggcgcgaa
     1501 agccctgttc tggatgcgac ctatgctcca ggatcagctc acagagcgcc accgtcgccg
     1561 gtccgatcag gcgcgcgtcg gcgcggatgc gctcgatcgt ccagccggcg tatcgccgat
     1621 ggctggacgg catgtgttcc gctaccgtcg tgtgtttgtg attgccgctc atgcgcatgt
     1681 gggcggcgat ccgctcgccc ttgaggaaga tttcgaccgt cctcgcggtc agccgcgcgt
     1741 cgacctcggc gcgggcgaag cgatggggga cgctatagta atgagcggcg acctcgatgt
     1801 gatagtcgat accgacgcgg cgcatccgcc attcggagaa ctcgtaaggt tcgctcggaa
     1861 gggacttcag cgccggacga tcgatctgtt cgagcaattg ccggcgcgtt acgccgagcc
     1921 gccggatcgg gcgctcttcg ttgagatgcg tcatcagctc accgatcgcc gcgttgacct
     1981 ccgccaggct gtaaaaagtt cgatggcgca accgcccgag aagccatctc tcaacgatga
     2041 gcaccgcctg ctcgactttt gctttatccc tcggacgtct cggcctcgct ggcaaaatgg
     2101 cggtgtcgta atgcgccgcc atctcggcat aggttcgatt gacctgaggg tcgtagagac
     2161 aagccttgat aacagcggtc ttggtattgt ccggcaccag caaatgcgga acgccgccga
     2221 tcacctcgag ggcgcggaca tgggcgtcga tccagtcggg cagcgcctgc gtccagctcg
     2281 cgtgcgcaaa agtgaagctc gacgcgccga gcacggcgac gaagatttgc gccttgcgga
     2341 tttcgccggt cagccggtcg atgacgaccg gaaccccatc gccggcgtaa tcgacgaaca
     2401 gccgctcgcc ggccgcgtgc gtctgccgca tcgtcggcga caacttcgat tcaaagccgc
     2461 gatagagctc gcaaaaccgc gaatagctgt aaccgccggg attggcggcg atatattcat
     2521 cccagacgat caccagggtg acgtgcttgc gcttcagctc ccgatgaacc gtcggccaat
     2581 ccggctcggc gtggcggcga tggccccgtt tggtcccgtg attggcgtaa agcgccgcct
     2641 ccaggtcgcc gtcgctcatg ctgtccggca agggccaacc cagcccggcg ccctcgaaac
     2701 gcctcaacgt ctcgcgaacc gtcgaggcgg ctatgcccag ccgacgcgcg atctcgcgcg
     2761 ttgaaatacc ggcggaaaac ttcaaacgaa tgatctcgcg cacttggcgc atcgcaactc
     2821 tttccgctgg catcatcgct cccttggatt gccaaaggag ggaccctaaa caggccagcg
     2881 gaggcgctcg tcgccattcc agaccccggg cggcattatt ccgttccggt gggcggcatc
     2941 atctcgttat ggtgggcggc atcattccgt tacggcgggc gacatcatct cgttttgatg
     3001 ggcggcttgg acaggaatca gcactggagt ggaagtcgga ttcgctggta ggactcagag
     3061 cgcaggaaag ctgcgcacac
//
LOCUS       DATCWM010000587         4659 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_53130, whole genome shotgun sequence.
ACCESSION   DATCWM010000587 DATCWM010000000
VERSION     DATCWM010000587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4659)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4659)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4659
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53130"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..440)
                     /locus_tag="VIQ50_11550"
     CDS             complement(<1..440)
                     /locus_tag="VIQ50_11550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015929215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY9361060.1"
                     /translation="MRAQALRVVVATVACLLWLNGCESSTRLGDMFQSNTAATQGASQ
                     DDPAITGSLPPKSREGAPAAAAPRSSDPNDDVSLGKKYFRAGNFALAERHFRRAVELH
                     PRDVDSWIGLAASYDRQRRFELADRAYDQGTKIAGPTAEILNNRG"
     gene            782..1435
                     /locus_tag="VIQ50_11555"
     CDS             782..1435
                     /locus_tag="VIQ50_11555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361061.1"
                     /translation="MPKPWISYVNPATVKDEAMRAEFDRCAREGTPRPESQAVRAHVP
                     AVFWSFANSWRDVFKNGVADHGIKELCRIYVSRSVLCEFCGNQRSIKAAQQGIVEEDY
                     RDLINFESSSRYDERQKAALAYAEAITWDLPVDDKFWARLHKHFSEPELVEIGYFVAL
                     TMGQQRWLRTLGIEHHQILAGTDASMAPGFETADALARAKQAPDYWAKRSAKSEAAE"
     gene            complement(1510..2706)
                     /locus_tag="VIQ50_11560"
     CDS             complement(1510..2706)
                     /locus_tag="VIQ50_11560"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HEY9361062.1"
                     /translation="MIPDRSEWPALTPRLKPIVEAEYPRFSAAEMARRRAAVEAALAE
                     ADCDHLVFYGANRAGSAVQWLTQWPVTTEAIGVLTPRTRDALFVQWINHAPLATRLAT
                     EADVAWGGESSIAPAIAVLEKRGARENRVGVIGPMGFAQHAALAARFGKIADLNRAYV
                     RLRRVKSQEEIDWLRIGAWLSDRGMAGLRDGLAVGLTERELGDLIERAYTREGGSNVI
                     HFIGVTSMRNPQLGVPAQFPSTRRVAKGDVVFAEISAAFWDHSGQVLRSFAVGEEPPP
                     LYRALHAAADAAFDAVVAVLKHGATPAQVVEAAAVIEDAGFTIIDDLLHGYGGGYFPP
                     ILGSKSRPAGPVPAEPFEAGMTVVVQPNVVTRDGKAGVQTGELLLITHTGVERLHSFS
                     RGFARV"
     gene            complement(2703..>4659)
                     /locus_tag="VIQ50_11565"
     CDS             complement(2703..>4659)
                     /locus_tag="VIQ50_11565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019906348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY9361063.1"
                     /translation="RLVLSQVDYLAVDPTSPMAMKKVIRLIESGRPVVIFPEGRITVT
                     GSLMKVYDGAALIADKADAEIVPVRIEGLEQTPFSRLKEGQVRRRWFPKVTVTILEPV
                     KLTVDPELKGRKRRQAAGAALYGIMSDLVFRTTSTDRTMVQAVLQAAETHGRGRIAIE
                     DPVSGSLSYKRMLVGAAILGAKLMPLAPEGRAIGVMLPNANGAVLAILGLMTAGRVPA
                     MINFTAGAANILSACTAAQIDTIVSSRAFIEKARLRNLVAAIEKTVKIVYLEDIRAGI
                     TLGDKLRGLINANTPLLARKPDDWAAILFTSGSEGVPKGVVLSHRNMLANAAQAAARI
                     DFGREDKVFNVLPVFHSFGLTVGVMVPLVFGVPVYLYPSPLHYRTVAELIYAVNATIM
                     FGTDTFLAGYARAAHPYDFRSLRYILAGAEPVKETTRRVYMEKFGLRILEGYGITETA
                     PALALNTPMFNKFGTVGRILPGMEARLEKVEGVEEGGRLYVRGPNVMLGYLKADNPGM
                     LEPPAEGWHDTGDIVAIDEQGFVTIKGRARRFAKIGGEMISLAAVESLASELWPNALS
                     GVVAVPDPRRGERLILLTQQNGATRAEFQSFARAKHASDLMIPSDVWVLDKLPLLGTG
                     KVDIMAVGKLVEERLAAKPDTMARASA"
BASE COUNT          785 a         1553 c         1561 g          760 t
ORIGIN      
        1 ccgcgattgt tgaggatctc cgccgtcggt ccggcgatct tcgtcccctg atcgtaggcg
       61 cggtcggcaa gctcgaaccg gcgctgccgg tcgtaggaag ccgccagccc aatccaggaa
      121 tcgacgtcgc gcggatgcaa ctccaccgcc cggcggaagt ggcgctcggc cagggcgaaa
      181 ttgccggcgc ggaaatattt cttgccgagg ctgacatcgt cattgggatc ggacgatctc
      241 ggcgctgcgg cggcaggcgc tccctctcgc gactttggcg gtaggctgcc ggtaatcgcc
      301 ggatcgtctt gggacgcgcc ctgggtggcg gccgtgttcg actggaacat gtcgcccagc
      361 ctggtcgagc tctcgcagcc gttgagccac aacaggcagg cgaccgtcgc gacgacgact
      421 cgaagagctt gcgctctcat aggtgtggtt cccccggcgg cccggcggcg gattgcgccc
      481 cccgcggcga aagcacgcga cgcggcggcc gtcacaccaa ccggcccggc gaggctaggg
      541 gatgatgctt aacaatctct cgccgacctg ccggcccagc gcgggtcgcg ctgctggctt
      601 tatggcggat gcattagaat tgacccgatg gaccgcgggt aaacatcgcg cgagcacggt
      661 tgatcgcgct gtggccgtgc ggcaccatgc gagagcgctc gcgcagcatg gtgaataaag
      721 ggtaagcgcc ctgtctatct atctatctat ggggctgcgg gaggaaccgg aggccatatc
      781 aatgcccaag ccttggatca gttacgtcaa tcccgccacc gtgaaagacg aggccatgcg
      841 cgccgagttc gaccgctgcg cccgcgaggg caccccgcgg ccggaaagcc aggcggtccg
      901 cgcccacgtg cccgccgtgt tctggtcgtt cgccaactcc tggcgcgacg tgttcaagaa
      961 cggggtcgcc gaccatggca tcaaggaact ctgccgcatc tatgtgtcgc gttcggtgct
     1021 gtgcgagttc tgcggcaatc agcgctcgat caaggcggcg cagcagggca tcgtcgagga
     1081 agactaccgc gatctcatca atttcgagag ctcgagccgc tacgacgagc ggcagaaggc
     1141 ggcgctcgcc tatgccgagg cgatcacctg ggatctgccg gtcgacgaca agttctgggc
     1201 gcgcctgcac aagcacttca gcgagcccga gctcgtcgag atcggctatt tcgtcgcctt
     1261 gactatgggc cagcagcgct ggctgcgcac gctcggcatc gagcaccatc agattctcgc
     1321 cggcaccgac gcctcgatgg cgccgggctt cgaaactgcg gacgcgctgg cccgcgcgaa
     1381 gcaggcgccc gattattggg cgaagcgcag cgccaagtcc gaggcggcgg agtaaggtcg
     1441 gctctctgag gacctcaagc tgaggagccg cgcgacagcg cggcgtctcg aagcatgagg
     1501 acgccggcct cacacccgcg cgaagccgcg cgagaacgaa tgcagccgct ccaccccggt
     1561 gtgcgtgatt agcaacagtt cgccggtctg cacgcctgcc ttgccgtcgc gcgtgaccac
     1621 gttgggttgc acaacgaccg tcatgccggc ctcaaacggc tcggccggta ctggcccggc
     1681 ggggcggctc ttgctgccga ggatgggcgg gaaatagccc ccgccatagc cgtgcaggag
     1741 atcgtcgatg atggtgaagc cagcgtcctc gatgacggcg gccgcctcga ccacttgcgc
     1801 gggcgtcgcc ccgtgcttga gcaccgctac gactgcgtcg aaagccgcgt cggcggcggc
     1861 gtgcagcgcg cgatagagcg gcggcggctc ctccccgact gcgaagctgc gcagcacctg
     1921 gccggaatga tcccaaaacg ccgcgctgat ctccgcgaaa acgacgtcgc ccttcgctac
     1981 gcgccgcgtc gagggaaact gcgccggcac gccgagctgc gggttgcgca tggacgtcac
     2041 gccgatgaaa tggatgacgt tgctgccgcc ctcgcgggta taggcgcgct cgatcaggtc
     2101 gccgagctcg cgctcggtca ggccgacggc gagcccatcg cgcagcccgg ccatgccgcg
     2161 atcgctcagc caggcgccga tgcgcagcca atcgatctct tcctgcgact tcacgcgccg
     2221 caaccgcaca taggcgcggt tgaggtcggc gatcttgccg aaccgcgcgg cgagtgcggc
     2281 atgctgggcg aagcccatcg ggccgatgac gccgacgcga ttttcgcggg cgccacgctt
     2341 ttccaacacc gcgatagcgg gggcaatgga tgattcccca ccccacgcga catcggcctc
     2401 agtggcgagc cgcgtcgcca gcggcgcgtg gttgatccat tgcacgaaca acgcgtcgcg
     2461 cgtgcgtggc gtgagcacgc cgatggcctc cgtcgtcacc ggccattggg tgagccactg
     2521 caccgcagag ccggcgcggt tcgccccata gaacacgaga tggtcgcagt ccgcttcggc
     2581 gagcgccgcc tcgaccgcgg cgcggcggcg cgccatctca gcggcgctga agcgcggata
     2641 ttcagcctcg acaatcggct taagccgcgg cgtcagcgcc ggccactcgc tccggtcggg
     2701 gatcatgcgc tcgcgcgcgc catggtgtcc ggtttggcgg caagccgctc ctcgacgagc
     2761 ttgcccaccg ccatgatgtc gaccttcccg gtgccgagca ggggcagctt gtcgagcacc
     2821 caaacgtcgg acgggatcat tagatcggac gcatgctttg ccctggcgaa gctctgaaac
     2881 tcggcccgcg tcgcgccgtt ttgctgggtg agcagaatga gccgctcgcc ccgccgcgga
     2941 tcgggcacgg ccacgacccc ggagagcgcg ttcggccaca gttccgatgc aagcgactcg
     3001 accgcggcga gcgagatcat ctcgcctccg atcttggcga agcgcctggc gcggcctttg
     3061 atggtgacga agccctgctc gtcgatggcg acgatgtcgc cggtgtcatg ccagccttcg
     3121 gccggcggtt cgagcatgcc gggattgtca gccttgagat agcccagcat cacgttgggt
     3181 ccgcgcacgt agaggcgccc gccctcctcc actccttcga ccttctccaa gcgcgcctcc
     3241 atgccgggca ggatgcgccc gacggtgccg aacttgttga acatgggcgt gttcaaggcg
     3301 agcgccgggg cggtctcggt gatgccgtag ccttcgagaa tgcgcaggcc gaacttctcc
     3361 atatagacac gccgcgtcgt ttccttcacc ggctccgcgc ccgccaggat gtagcgcagc
     3421 gagcggaaat catacggatg cgccgcccgc gcgtagcccg ctaagaacgt gtcagtaccg
     3481 aacatgatcg tggcgttcac cgcataaatc agctccgcga ccgtgcggta gtgcagcggg
     3541 gacggataga gatagacggg taccccgaac accagcggca ccatcacccc gacggtgagg
     3601 ccgaatgaat ggaacaccgg cagaacgttg aacaccttgt cctcccggcc gaaatcgatg
     3661 cgcgccgcgg cctgcgcggc gttggccagc atgttgcggt gggagagcac gacgcccttc
     3721 ggcacgccct ccgagcccga ggtgaacagg atcgcggccc aatcgtcggg cttgcgcgcg
     3781 aggaggggcg tgttggcgtt gatgaggccg cggagcttgt cgccgagcgt gatgccggcg
     3841 cggatgtcct cgagatagac gatcttcacc gtcttctcga tcgcagcgac caagttgcgc
     3901 agccgagctt tctcgatgaa agcccgcgat gaaacgatgg tgtcgatctg cgccgccgtg
     3961 caggcggaaa ggatgtttgc cgcaccagcc gtgaagttga tcatcgccgg cacgcggccc
     4021 gccgtcatca gccccagaat ggcgagcacg gcgccatttg cgttcggcag catgacgcca
     4081 atcgcgcgcc cctccggcgc cagcggcatg agcttggcgc cgaggatggc ggcaccgacg
     4141 agcatgcgct tgtaggagag actgccgctg acggggtctt cgatcgcgat gcggccgcgc
     4201 ccgtgggttt ccgcggcttg cagcaccgcc tgcaccatgg tgcgatcggt cgaggtggtg
     4261 cggaacacga gatcggacat gatgccgtag agcgccgcgc ccgcggcctg ccggcgcttg
     4321 cggcccttga gctcggggtc gacggtgagc ttcacgggct cgagaatcgt gaccgtcacc
     4381 ttgggaaacc agcgccggcg cacctgaccc tccttgagcc ggctgaacgg ggtctgctcc
     4441 aggccttcga tgcgtacggg cacgatctcg gcatcggcct tgtccgcgat caaggccgca
     4501 ccgtcataga ccttcatcag gctgccggtg acggtgatcc gcccttccgg gaagatgacc
     4561 accggccgcc cgctttcgat caggcggatg acttttttca tggccatggg gctggtcgga
     4621 tcgaccgcca ggtaatcgac ctgcgacaga acgaggcgg
//
LOCUS       DATCWM010000588         2038 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_371677, whole genome shotgun sequence.
ACCESSION   DATCWM010000588 DATCWM010000000
VERSION     DATCWM010000588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2038
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_371677"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2038)
                     /locus_tag="VIQ50_11570"
     CDS             complement(<1..>2038)
                     /locus_tag="VIQ50_11570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361064.1"
                     /translation="LMDSAPTTLVEYQPVPAASRSFGEMALQSTNADARAELSLFGTH
                     SWLNAHARLNELRDALTELKATDLEERRILVAETLDLASHRLDAWLTAIVERRRRQLR
                     AARPAGLTIAGYGWLQEIEPTGHRQLAGGFVHAPSLTHAATAGILRSAYLSHNGEPND
                     KGAFAVDLSSARVRTALHLLDGVRQGQPLGGLLGYRIERGLHEEGLDRLVLSLRALAP
                     FSHGKLTDRGEAVAPESVEALAASNVVDGIALVEKYQADPNSIRSALGNKPKDNPYLT
                     GPWPNPIPPNEWSKAAAIIEEAAAALDAVSDLLLAESVHQLVLGNTARAAAALDAASG
                     GDSPAPEPEVIATPAEGMPFTHRIMLVAGEAAPWNLTRPRSAAEPRLEAWAAARLGSA
                     ETIIVADAPNDEFFTIADTGFCALDLIYDATDRATFDDRLRAALPGLQPKAKLYETRG
                     ADWNEKLRAIGDIFECAASLRVLFVHARPATPADLAVPSVPASRAVSAAGLQEAHDRV
                     QAARDLLGLRCTFLDSLLKAEVHDDAQLRPALEALAAFGLVAPLVHKNQLAFVAQAAL
                     AAGQRRLENADVALARPLEAEAIWQAGQAVFGEGFWILPAIDPPAGADSWGAALVAPP
                     PGATTTAVRTCLTDVAAVREGAGRFLEATLLTEATGGAPAWQVAQVTGIGGTAPS"
BASE COUNT          352 a          680 c          685 g          321 t
ORIGIN      
        1 cgctcggcgc ggtaccgccg atgccggtca cctgcgccac ttgccacgcc ggcgcgccac
       61 cggtcgcctc cgtgagcagc gtcgcttcaa gaaaacgccc tgcgccctcc cgcaccgcgg
      121 ccacatccgt taggcaagtg cgcaccgccg tcgtggtcgc ccccggcggc ggggcgacca
      181 gcgcggcacc ccacgagtcc gctcccgccg gaggatcgat ggccgggaga atccaaaaac
      241 cttcgccgaa caccgcctgc ccggcctgcc agatcgcttc agcctcgagc ggacgggcga
      301 gcgccacatc tgcattctct aaacgacgct ggccggccgc gagcgcggct tgcgccacga
      361 aggcgagttg atttttgtgg acaaggggcg cgaccagccc gaaggccgcc agcgcttcca
      421 gcgctggacg cagttgcgcg tcgtcgtgca cttctgcttt gagcagcgaa tcgagaaacg
      481 tgcagcgcaa gccaagaaga tcgcgcgcag cctgcacgcg atcgtgagct tcttgcaacc
      541 cggccgcgct cacagcgcgc gaagcaggaa cacttgggac tgcgagatcg gccggcgtgg
      601 ccgggcgcgc gtgcacaaag agcacgcgca acgacgccgc acactcaaaa atgtcgccga
      661 tcgcgcggag cttttcgttc caatccgcgc cgcgcgtctc gtacaatttt gctttcggct
      721 gcaaccccgg aagcgccgcg cgcagccggt cgtcaaaggt cgcgcgatcc gtggcgtcgt
      781 aaatcaaatc gagcgcgcag aaaccggtgt cggcgatggt gaaaaattcg tcgttaggcg
      841 catcggcgac gatgatcgtc tcggccgagc caaggcgcgc ggcggcccag gcttccagtc
      901 gcggctcagc ggcgctgcgc ggccgggtaa gattccaggg cgcagcctcg cccgcgacga
      961 gcatgatccg gtgggtaaac ggcataccct ccgcaggcgt tgcgatcact tccggctccg
     1021 gcgcgggcga gtcacctccg ctcgccgcat cgagcgcggc ggccgcgcgc gcggtgttgc
     1081 cgagcacgag ttgatgcacc gattctgcga gcaggagatc gctcacggca tcaagggcgg
     1141 cagccgcttc ttcgataata gcagcagcct tgctccactc gttaggcgga attggatttg
     1201 gccacggccc ggtgagataa gggttgtcct tcggtttgtt accgagcgcc gagcggattg
     1261 aattcggatc agcctggtat ttttcgacca gcgcgatgcc atcgacgacg ttggaggcgg
     1321 cgagcgcctc cacgctttct ggcgcgaccg cttcgccgcg atcggttaat ttcccatggg
     1381 aaaagggcgc gagcgcgcgt agcgaaagga cgagccggtc gagcccttcc tcatgcaggc
     1441 cccgctcgat gcgatagccg aggaggccgc cgagcggctg gccctggcgg acgccatcga
     1501 gcaggtgcaa ggcggtgcgg acgcgcgcgc tcgacaggtc caccgcgaac gcgcccttgt
     1561 cgttaggctc gccgttgtgg gaaagataag cgctacgcaa aatgccggcg gtggcggcgt
     1621 gagtgaggct gggcgcgtgc acgaaaccgc ccgccagttg ccgatgcccg gtcggctcga
     1681 tctcctgcaa ccagccgtag ccggcgatcg ttaggccagc gggccgggcc gcgcgcaact
     1741 ggcgccgccg gcgctcgacg atcgcggtga gccaggcgtc gagccggtgc gatgcgaggt
     1801 cgagcgtctc cgcgacgagg atgcgccgct cttcgagatc ggtcgctttc agctcggtca
     1861 acgcatcccg caattcgttg agccgggcgt gcgcattgag ccaggagtgc gttccgaaaa
     1921 ggctcagctc cgcacgcgcg tcagcattgg tggattgcaa agccatctca ccgaaggaac
     1981 ggctggccgc cgggaccggt tgatattcca ccagcgtcgt cggcgcggaa tccatcag
//
LOCUS       DATCWM010000589         2424 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_322848, whole genome shotgun sequence.
ACCESSION   DATCWM010000589 DATCWM010000000
VERSION     DATCWM010000589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2424)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2424)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2424
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_322848"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..728)
                     /locus_tag="VIQ50_11575"
     CDS             complement(<1..728)
                     /locus_tag="VIQ50_11575"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEY9361065.1"
                     /translation="MNASARTALAAGFAIIAAVSAAGTVRADDIKVLSTIGVKPALPE
                     LVAEFERGSGHKISIVWGNAATLKSRYLEGEQADVAVLTAAAIDDLLKAGKVVGRVDL
                     ARSGMGIGIKAGAPKPDISSPETFKRTLLAAKSIAYSSQGASGIYFVTLIERLGIAAQ
                     VKAKHKDTAGAVGELLTTGEAEIGIQQIPELAAVPGVEVVGPFPGELQVITVFSAALD
                     TKAKDNEAAKAFVKFISALAAAAA"
     gene            complement(798..1403)
                     /locus_tag="VIQ50_11580"
     CDS             complement(798..1403)
                     /locus_tag="VIQ50_11580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEY9361066.1"
                     /translation="MDAAHPQPVADAGEITASPRDRLIEAATRLFCRYGINSVGVDEI
                     VAAAGTAKTTLYRLFGSKDGLVEAVLECEGRAWRAWFLAEIDSAGGPPLARLSRIGKA
                     LRLWFAREDFYGCPFINAVAESDKADNRMRSLAIAHKKIVVERLATLCVEAGLKEPME
                     VAHSLGLVIDGAIVAALVIGNASVADTAGRTCAAILSDAKG"
     gene            1642..2184
                     /locus_tag="VIQ50_11585"
     CDS             1642..2184
                     /locus_tag="VIQ50_11585"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008143867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEY9361067.1"
                     /translation="MNQAVAKTAVTGCLAPIDKQGLDGLIAEGKADPKVIKTLKCKTV
                     AEGRFRHLNFIRNLPAYVVDEPPGLLGDDTAPNPSEASLAALGSCLAVGIHANAVARG
                     ITVFKLEIELEGDLNITGVWGTGDLSEKPVGFTDVRAKVTFEADRPRAELDALIAHAR
                     VWSPVANTFTRPVNLEVTLA"
BASE COUNT          414 a          813 c          753 g          444 t
ORIGIN      
        1 taggcggcgg ctgcggccag cgccgagatg aacttcacga aggctttggc agcctcgttg
       61 tccttggcct tggtgtcgag agccgccgag aacacggtta tgacctgaag ttcgccggga
      121 aacggcccga ccacttccac gcccggcacc gccgcaagtt cgggaatttg ctgtattccg
      181 atctcagcct cgcccgtggt gagcaattct ccgaccgcac ccgccgtatc cttgtgcttg
      241 gccttgacct gggcggcgat gccgagccgc tcgatgagcg tcacgaaata gatgcctgag
      301 gcgccttgcg acgagtaggc gatggatttt gccgcgagca gcgtgcgctt gaacgtctcg
      361 ggcgagctga tgtcgggctt gggcgcgccg gccttgatcc cgatccccat gccggaacgg
      421 gcgaggtcga cacggcccac gacttttccc gccttgagga ggtcgtcgat cgccgccgcc
      481 gtcaggaccg cgacatccgc ctgctcgccc tcgagatacc ggctcttgag cgttgcggca
      541 ttgccccaca cgatcgagat cttgtggccg ctgccgcgtt cgaattccgc gaccaactcg
      601 ggcagcgctg gtttcacgcc gatcgtcgac agcaccttga tgtcgtcggc gcgaacggtg
      661 ccggcagccg agaccgcggc gatgatggca aatcctgccg cgagtgcagt gcgtgcgcta
      721 gcattcatgg cgttcctcct gcgacggtta ttttgcaccc gctttttccg ctcgcgaccc
      781 gtcccgttag tggcgagtca gcctttggcg tccgacaaga ttgccgcgca agtccgccct
      841 gcggtatcgg ccaccgaggc gttgccgatc acgagcgcgg ccacgatggc gccgtcgatg
      901 acgagcccga gcgaatgcgc gacctccatc ggctccttta atcccgcttc gacgcacagc
      961 gtcgccagcc gttcgaccac gatcttcttg tgcgcgatcg ccagtgaacg catgcgattg
     1021 tcggccttgt cgctttccgc gaccgcattg atgaatgggc agccgtagaa gtcctcgcgc
     1081 gcaaaccaca gccgcagcgc tttgccgatg cggctgagcc gcgcgagcgg tgggccgccc
     1141 gcgctgtcga tctcggcgag gaaccaggcg cgccaagcgc ggccttcgca ttcgagcacc
     1201 gcttcgacca ggccatcctt cgacccgaat agccgataga gcgtggtctt ggccgttccc
     1261 gcagcggcga cgatctcatc gacgccgacg gaattgatcc cgtaacggca aaacaggcgg
     1321 gttgccgctt cgatcaaccg atcgcgagga gaagcggtga tttcgccggc atcagcaacc
     1381 ggctgcgggt gcgccgcgtc catgccgcca cttagcccgg agcgaacacg accgcaatca
     1441 ttccgtggat acgaccgttc tgtcctgtcc gcgcccagcg ggaaggcagg gttgaccggc
     1501 ttttaagccg catcggccca cgaccctccc gctgggggcc ggccccttct gattccattc
     1561 gggttttttt tgccagggcg agagtggcat agctcctgca tagaacagaa cggtctgtat
     1621 cgacaacagg agaggacgct catgaatcaa gccgtggcaa agaccgccgt caccggctgt
     1681 ctcgccccca tcgacaaaca gggcctcgac gggctgatcg ccgaaggcaa agccgatccg
     1741 aaggtcatca agacgttgaa atgcaagacc gtcgccgagg gccgcttccg ccatctcaat
     1801 tttatccgca acctgccggc ctacgtggtc gacgagccgc cggggctgct cggggacgac
     1861 accgcgccca acccgtcgga ggcctcgctt gccgcgctcg gctcctgcct cgcggtcggc
     1921 atccacgcca acgccgtcgc gcgcggcatc accgttttca aactcgagat cgagctggaa
     1981 ggcgatctca acatcaccgg ggtgtggggc accggcgacc tgtcggagaa gcctgtcggt
     2041 ttcaccgacg tgcgcgccaa ggtgacgttc gaggccgatc ggccccgcgc ggaactcgac
     2101 gcgctcatcg cccacgcgcg cgtttggtcg ccggtcgcca acaccttcac acgcccggtc
     2161 aatctcgaag tgacattggc ttaaacgcgg tgcgggggcg gaacccggtc tcgcctccgc
     2221 attacccgat tgttcgtcat ccgaaagcgc ctgcgatgct cgatcgttcg gtaagcgcac
     2281 aagaagacgc ctatgcggtc gccgatgtgg tcgagacggt gcgcgagctg tcgtcgcgcg
     2341 agcttaagcc catcgttcgc aagatcgatg cggaaggata ttaccccgag gctgtgctgc
     2401 gcgccttcgg ccgctcgggc gcgt
//
LOCUS       DATCWM010000590         2849 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_252768, whole genome shotgun sequence.
ACCESSION   DATCWM010000590 DATCWM010000000
VERSION     DATCWM010000590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2849)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2849)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2849
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_252768"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..205
                     /locus_tag="VIQ50_11590"
     CDS             <1..205
                     /locus_tag="VIQ50_11590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma factor-like helix-turn-helix DNA-binding
                     protein"
                     /protein_id="HEY9361068.1"
                     /translation="LSVLSERERRIFQARRLADESATLQELAAEFTISRERVRQIEAR
                     AFQKVQRATQLAITHAQPSITIH"
     gene            346..903
                     /locus_tag="VIQ50_11595"
     CDS             346..903
                     /locus_tag="VIQ50_11595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY9361069.1"
                     /translation="MLDPSVREPLLGAIPKLRAFAIALCRDRDRAEDLVQGTLLRACA
                     SIDSFQPGSSMDAWLCTIMRNHFYSEWRRDRRCSRALATLPDMEAENPQQITSLEYSE
                     LCAALAKLDPKHREAVMLVGASGLSYGEAASVCGCPVGTVKSRVNRARTELARMLSME
                     GPEHFQADAVFSAAIGSGECAPPQP"
     gene            1005..1286
                     /locus_tag="VIQ50_11600"
     CDS             1005..1286
                     /locus_tag="VIQ50_11600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361070.1"
                     /translation="MSDGRYYIVGENDVWMLQFRETEHRDVTRRNAAVAFAVGAAQEL
                     GMRGECAHVCVMDDHGRLRRKWTYGRWSYATDFGDAPGDLRRTGGWLPS"
     gene            1519..>2849
                     /locus_tag="VIQ50_11605"
     CDS             1519..>2849
                     /locus_tag="VIQ50_11605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012590441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEY9361071.1"
                     /translation="MGSCTAVTVRALGLLLLLIAAPSAAQDAAGYSCAGDKGGITLPP
                     GFCATVFADNVGHARQMVVAPNGVVYVNTWSGPYFRNDTPPPGGFLLALQDTTGDGRA
                     DVVLRFGPGAESGNAGGTGIALYRGALYAETNDRIVRYALPTGAIAPSGPPEVVVSGL
                     PLTGDHPMHPFKIDAQGNLFVDLGSATNSCQSENRMPNSPGIQPCTELNTRAGIWRYD
                     ANRIGQRFSPAERFATGLRNGEGIAFDSAGRILVTQHGRDQLRENWPHLYTPAQGANE
                     PAEELVELERGADYGWPYCYFDLTQHKLVLAPEYGGDGGKTVGLCADKRAPVAAFPAH
                     WAPNDLLLYDGHQFPAAYRGGAFIAFHGSWNRAPLPQGGYNVVFQPLAEGKASGPFVV
                     FADGFAGAVEEPGQALHRPSGLAVGPDGTLYISDDQRGRIWRVTYRGPASAA"
BASE COUNT          493 a          911 c          937 g          508 t
ORIGIN      
        1 gctctcggtg ctcagtgagc gcgagcggcg catcttccag gcgcgccgcc tcgcggacga
       61 atcggccacg ctacaggagc ttgccgccga gttcaccatc tcgcgcgagc gtgtgcggca
      121 gatcgaagcg cgcgccttcc agaaggtgca gagggcgacg caattggcga tcacgcacgc
      181 gcaaccttcg atcacgattc attgaacctg cgccgccacg ggcgcatttg cgcaatccaa
      241 gaacagtcag agcaagggaa accgcgcgcc tgggcggctt tgcgtgctct atcacaggac
      301 gccgacatct cgaagttgga acggtcgggg agattgcgag cgacgatgct tgatccatcg
      361 gtacgagaac cactgctcgg agcaattccc aagctgcgcg cgtttgccat cgcgctgtgc
      421 cgggaccgcg accgggcgga ggatctggtt cagggtacgt tgttgcgggc ctgcgccagt
      481 attgattcat tccagccagg ctcgagtatg gacgcgtggc tgtgcaccat catgcgcaat
      541 cacttttatt cggaatggcg gcgtgaccgc aggtgttccc gggcgctcgc aaccctccct
      601 gacatggagg cggaaaaccc gcagcagata acgagcctcg aatacagcga gctttgcgca
      661 gcgctggcga agctcgatcc gaagcaccgc gaggcggtga tgctggttgg cgcctccggg
      721 ctttcgtatg gggaggcggc gagcgtgtgc ggctgcccgg tcggaaccgt gaagagtcga
      781 gtgaaccggg cgcgaaccga gcttgcccgc atgctctcga tggaaggccc ggaacacttc
      841 caggcagacg ccgttttcag cgccgccatc ggcagcggag agtgcgcgcc gccgcaacct
      901 taaagcttcg ggtcaggacc atgagcgcag ttcaatacca tcgaggtcgt cgcaaggtta
      961 ggcaggcacg ggccttggga cggctgccgc tgcaggagca ggccatgtcc gacggcagat
     1021 attatatcgt gggggagaac gacgtttgga tgctgcagtt cagggagacc gaacatcgcg
     1081 acgtcacgcg ccgcaatgcg gccgtcgcct tcgcggtcgg tgcggcgcaa gagctcggca
     1141 tgcgcggcga gtgcgcccac gtctgcgtta tggatgacca cggccgtttg cgacgcaaat
     1201 ggacatatgg tcggtggagc tatgccacgg attttggcga cgcccccggc gatcttcgac
     1261 gaaccggcgg ctggttgccc tcatagcgcc cgtcggcatt cccgtttcct ttgatacctt
     1321 cggcccaata gcaacgcacc ccgccacatt gccgcaaaaa ctcggcaacc gcggcaattg
     1381 cgcgcaagcc gccgcggcgc gtcagccgta ggtcatcggc gtgcgccctg tggagcgtcg
     1441 gacttgttcc gctcgagggt atttgtcagt gagaccaaga ggtaagcgat gcgggatgct
     1501 ttgttcatac accgctccat gggcagctgc actgctgtga ccgttcgcgc gctcggacta
     1561 ctgctgctgc tgatcgccgc gccatccgcc gcgcaggatg ctgcgggtta ctcctgcgcg
     1621 ggcgacaagg gcgggatcac gctgccgccc ggtttttgcg caacggtgtt cgccgacaat
     1681 gtcggtcacg ctcggcagat ggtggtggcg cccaatgggg tggtctacgt caacacctgg
     1741 agcggtcctt atttccgcaa cgacacgccg ccaccgggcg ggttcctgct cgccctgcaa
     1801 gacaccaccg gcgacggccg cgccgacgtc gtccttcgct tcggtcccgg tgcggaaagc
     1861 ggcaatgccg gcggcaccgg catcgcgctg tatcgtggcg cgctctacgc ggagacgaat
     1921 gatcggatcg ttcgttacgc gctcccgaca ggggcgatcg caccgagcgg cccgcccgag
     1981 gtggtcgtgt ccggactgcc gctgaccggc gatcacccga tgcatccgtt caagatcgat
     2041 gcgcagggca atctcttcgt cgacctcggc tcggccacca attcctgcca aagtgaaaac
     2101 cgaatgccga actctccggg cattcagccc tgcaccgagc ttaacacgcg ggccggcatt
     2161 tggcgttacg acgccaatcg gatcgggcag cgcttttcgc cggccgaacg tttcgccacc
     2221 gggctgcgca acggcgaagg aattgcattc gactcggctg ggcgcatatt ggtcacccag
     2281 cacggccgcg accagctgcg ggaaaactgg ccgcacctgt atacgccggc gcagggcgca
     2341 aacgagcccg cggaggagct cgttgagctc gagcgcggcg ccgactatgg ctggccgtat
     2401 tgttacttcg acctcacgca gcacaagctc gtgcttgctc cggagtacgg cggcgacggc
     2461 ggcaaaacgg tcgggctatg cgctgacaag cgcgcacctg tcgccgcgtt ccccgcgcat
     2521 tgggcgccca acgatctgtt gctttatgac ggacatcagt ttccggccgc gtaccgggga
     2581 ggtgcgttca tcgctttcca tggctcgtgg aatcgcgcgc cgctccccca aggcggctac
     2641 aatgtcgtgt tccagcccct ggcagagggt aaggcgtcgg ggccgttcgt ggtgttcgcc
     2701 gacggattcg ccggcgccgt ggaagagccg ggtcaggccc tgcaccgccc gtccggcctc
     2761 gccgtcggac ctgacggcac actttatata tcggacgacc agcgcgggcg catttggcgg
     2821 gtgacgtatc gcggtccggc ctccgccgc
//
LOCUS       DATCWM010000591         2089 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_204322, whole genome shotgun sequence.
ACCESSION   DATCWM010000591 DATCWM010000000
VERSION     DATCWM010000591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2089
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204322"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1830
                     /gene="dxs"
                     /locus_tag="VIQ50_11610"
     CDS             <1..1830
                     /gene="dxs"
                     /locus_tag="VIQ50_11610"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007594649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HEY9361072.1"
                     /translation="LRQETVDAVAVTGGHLGAGLGVIELTVAIHYVFNTPQDRLIWDV
                     GHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRAESEYDPFGAAHSSTSISAGLGMAVA
                     RDLAGNSNHVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAPPVGALSG
                     YLARLVSGRTYRSVHHTVKKVAKLLPPFLEQRAVAIEEYARGLVTGGTLFDELGFFYV
                     GPIDGHNIDHLLPVLKNVRDAKDGPFLVHVVTKKGKGYEPAEKSADKYHGVVKFDVAT
                     GAQAKSKAAAPAYTKVYAEALIKEARKDDKIVAITAAMPSGTGLDLFAKEFPDRCFDV
                     GIAEQHGVTFAAGLATEGFKPFATIYSTFLQRAYDQVVHDVAIQRLPVRFAMDRAGLV
                     GADGPTHAGAFDVAYLGCLPGFVVMAAADEAELVHMVATAAAIDDRPSALRYPRGEGL
                     GVPMPAEGTPLEIGKGRVLREGTKVALFSFGARLGECLKAADELAALGLSTTVADARF
                     AKPLDTELLLRLAREHEVLITVEEGAIGGFAAHVLQALAVSGVLDGGIKLRSMMLPDE
                     FIDQDSPTAMYAKAGLDARGIVATAFEALGQNLRGEAVRMGRG"
     gene            complement(1849..2034)
                     /locus_tag="VIQ50_11615"
     CDS             complement(1849..2034)
                     /locus_tag="VIQ50_11615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6496 domain-containing protein"
                     /protein_id="HEY9361073.1"
                     /translation="MARRYSRGASKDVERAMRKRKRGTLKSGRSGRKVKSRKQAIAIG
                     LSEARRKGKKVPRRGKK"
BASE COUNT          343 a          669 c          674 g          403 t
ORIGIN      
        1 ctgcgccagg agaccgtcga cgccgtcgcc gtcacgggcg gccatctcgg tgccgggctc
       61 ggggtcatcg agctgacggt cgccattcat tacgtgttca acaccccgca ggaccggctg
      121 atctgggacg tgggccacca ggcctatccg cataagatct tgaccggccg gcgcgaccgc
      181 atccgcacct tgcggcaggg gggcgggctt tccggtttca ccaagcgtgc cgagagcgag
      241 tacgacccgt tcggtgcggc acactcctcg acctcgatct cggccgggct gggcatggcg
      301 gtcgctcgcg acctcgccgg caattcgaat cacgtgatcg ccgtgattgg cgacggcgcg
      361 atgtcagcag gtatggccta tgaggccatg aacaatgcgg gcgccatgaa ctcgcgcctg
      421 atcgtcatcc tcaatgacaa cgatatgtcc attgcgccgc cggtcggcgc gctctcgggt
      481 tatctcgcgc gtttggtctc tgggcgcacc taccggtcgg tgcaccatac cgtcaaaaaa
      541 gtggccaagc tgctgccacc gttcctggag cagcgcgcgg tcgccatcga ggaatacgcc
      601 cgtggtctcg tgaccggggg taccttgttc gacgagctcg gattcttcta tgtcgggccg
      661 atcgacggcc acaacatcga tcatctcttg ccggtgctca aaaacgtgcg cgacgccaag
      721 gacgggccgt ttctcgttca cgtcgtcacg aaaaagggca agggctacga gccggcggaa
      781 aaatcggcgg acaaatatca cggcgtggtc aagttcgacg tggcaacggg cgcccaggcc
      841 aagtcgaaag cggccgcgcc ggcctacacc aaagtctatg ccgaagccct catcaaggaa
      901 gcgaggaagg acgacaagat cgttgccatt accgcggcaa tgccgtcggg caccgggctt
      961 gacctcttcg ccaaggaatt tcccgatcgc tgcttcgatg tcggcatcgc cgaacagcat
     1021 ggggtgacct tcgccgccgg ccttgccacc gaaggcttca agccgtttgc aaccatctat
     1081 tcgacgttcc tgcagcgcgc ctacgaccag gtcgtacacg acgtggcgat ccagcgcttg
     1141 ccggttcgtt tcgccatgga ccgtgccggc ctcgttggcg cagacggccc gacccacgcc
     1201 ggtgcgtttg acgtggcgta tctcggctgc cttccgggtt tcgtggtcat ggcggcggcg
     1261 gacgaagcgg agcttgtgca tatggtggcg acggctgccg ccatcgatga ccgtccgtcg
     1321 gcgctgcgct acccgcgcgg cgagggcctc ggcgtgccga tgccggcgga aggcacaccg
     1381 ctggagatcg gcaagggacg cgtgctgcgc gagggcacaa aggtggcgct attctcgttc
     1441 ggcgcacggc ttggcgaatg cctcaaggcg gcggacgaac ttgccgcact cggactttcg
     1501 accacggtcg ccgatgcgcg ctttgccaag ccgctagata ccgaactcct ccttcggctc
     1561 gcacgcgagc acgaggtgct tatcaccgtc gaggaagggg ccattggcgg ctttgcggcc
     1621 catgtgctgc aagcgttggc cgtcagcggc gtgctcgacg gcggcatcaa gctgcgttcc
     1681 atgatgctgc ccgacgagtt catagatcag gattcgccga cggcgatgta cgcgaaggcc
     1741 ggcctcgacg ccagaggaat cgttgccacg gcgttcgagg cgctcgggca gaatttgcgc
     1801 ggcgaggcgg taaggatggg acgcgggtaa gggcttccgc gcgtccagct attttttgcc
     1861 tctgcgcggc accttttttc ctttgcggcg agcttccgaa aggccgatgg cgatggcctg
     1921 cttgcggctc tttacctttc ttccgcttct accgctcttg agcgttccgc gtttgcgctt
     1981 gcgcattgcg cgctcgacgt ccttcgaagc gccgcgcgaa tatcgtcgtg ccatggttct
     2041 cctccgtcct gatccgagct gggttgaacc ccgctctgcg gctcgggcc
//
LOCUS       DATCWM010000592         2471 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_306726, whole genome shotgun sequence.
ACCESSION   DATCWM010000592 DATCWM010000000
VERSION     DATCWM010000592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2471)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2471)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2471
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_306726"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            480..1565
                     /locus_tag="VIQ50_11620"
     CDS             480..1565
                     /locus_tag="VIQ50_11620"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEY9361074.1"
                     /translation="MDFPRARRDQGDPPEPLESTEDIWTVAAHMATVGIFVLLLGLCL
                     YFLRPVLLPVVAALLIGTTLAPIAKAGARRRISPWATAIALGALLLALAGTAVTLIAR
                     PVSEWITRAPEIGAAIKQKLYVLDRPLAALRELQEVVMPSGNSVAVEPSQWGVVTPLV
                     AFVTPAVVEITLFFVTLIFFLATQINFRRYVASFFTTREGKLRYIRIANDIEEHLATY
                     ITTVTIINFGLGVVVAIGAWLFGLPNPIILGLMAMALNYVPYIGAACTTVVLFGVGLV
                     TFPSLGYALVPPAAFVGAATVEGQFITPTVLGHRLTLNPLAVLLALAFWAWLWGPMGA
                     FLAVPLTIVILVTMTHLFPPDESKLPD"
     gene            1658..2053
                     /locus_tag="VIQ50_11625"
     CDS             1658..2053
                     /locus_tag="VIQ50_11625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361075.1"
                     /translation="MSSTSGTIRDTVRETARDAKDAARESGKAASAASDDIQADLQAL
                     RDDVTRLAAQITDIFTAKGNAAWARARSNVEGVVSDVSAKGQEAVDAVQEVSDRVVDA
                     IDESLRTRPYTTLAMALGIGFLFGAMWRR"
     gene            2116..>2471
                     /locus_tag="VIQ50_11630"
     CDS             2116..>2471
                     /locus_tag="VIQ50_11630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361076.1"
                     /translation="MSGWLRYFALNAQVRTGLSAAVLIWAIVGAAAAVGAAIFLLAAL
                     FVWLAQLYGALIAAVALGCAFVLIALIALAVCLMTRRRNMERARLELAARSSNWFDPK
                     LVTVGVQIAQQIGWRRL"
BASE COUNT          388 a          795 c          827 g          461 t
ORIGIN      
        1 tttcggccgg ccgcgcgcgg cggcgcgcag ccgcttgtag atgtcgagct tctgccagcg
       61 ggcgagcagc tcgggctcct tctgcggcag cccggcgcgc atgggaaagt cggtcttggg
      121 tagaaataga gtctcgctgt agtcgcgggc ggcgtcggtc atgatcgtat tatcggcggt
      181 cgaagttgaa ttggatggca acaagggctc ggcaacgcaa gtcccgccgc gggagtggtc
      241 aagcgcgggc cgagcccgta attcgccgag cagccgcgcc gagcaaaaca gcaaatgaaa
      301 cggatgccat catggcgccg tcctagcaga tcgccggaaa cgggaaaagg cccgcgccgg
      361 cggcgccacc gccgcggtca tccgccctgt gcgcgaacgc tcaggggcgg atggaactct
      421 gtatgataat gtcgcgttga gcgtggcgca ggcgtgtggc cggcccatgg gaggcgaacg
      481 tggattttcc tcgtgcccgt cgcgaccagg gcgatcctcc agagccgctc gagtcgaccg
      541 aggacatctg gacggtggcg gcgcacatgg cgaccgtcgg catcttcgtc ctgttgctag
      601 ggctctgttt atatttctta cgcccggttc tgctgccggt ggtggcagcg ctgctaatcg
      661 gcacgacgct cgcgccgatt gccaaagccg gcgcgcgccg tcgcatctcg ccctgggcga
      721 ccgcaattgc gctcggcgcg ctgctcctcg cgctcgccgg gaccgccgtg accttgatcg
      781 cgcgaccggt cagcgaatgg atcaccaggg cgccggagat cggcgccgcg atcaagcaga
      841 agctctacgt gctcgatcgt ccattggcgg cgttgcgcga gctgcaggag gtcgtcatgc
      901 cgtcgggcaa ttcggttgcg gtcgagccgt cgcaatgggg ggtggtgacc ccactggtcg
      961 ccttcgtcac gccggcggtg gttgagatca ctctgttctt cgtgacgctg atcttctttc
     1021 tcgccacgca gatcaatttc cgcagatacg tggcgtcatt cttcaccacg cgcgagggca
     1081 agctgcgcta catccgcatc gccaacgaca tcgaggagca tctggcgacc tacatcacca
     1141 cggtaacgat catcaatttc ggccttggcg tggtggtagc gattggggca tggcttttcg
     1201 gcttgcccaa cccgatcatc ctcggactga tggccatggc gctcaattac gtcccgtata
     1261 tcggcgccgc ctgcacgacg gtggtcctgt ttggcgtcgg tctcgtgacg ttcccctcgc
     1321 ttggatacgc gctcgtgccg ccggcggcat tcgtcggcgc ggcgacggtc gaaggccaat
     1381 tcataacgcc cacagtcttg ggccaccgcc tcacgctcaa tcccctcgct gtcctgctgg
     1441 cgctcgcctt ctgggcctgg ctgtggggtc cgatgggagc gtttctcgcc gtgccgctga
     1501 cgatcgtgat cctggtcacg atgacccacc tatttccgcc ggacgagagt aagctaccgg
     1561 actgacacat cggcgcgacg cggcaagtgg aacttttccc cttgcgtccc gttggcgcga
     1621 tggcgaatat ttctcggttt cgagcggagt aagccaaatg tccagcacat ccggcacgat
     1681 cagggacacg gttcgggaga cggcgcggga cgccaaagac gccgcgcgcg agagcggcaa
     1741 ggccgcctcc gcggcgagcg acgatatcca agcggatctg caggcgctgc gggacgacgt
     1801 gacgcggctt gccgcgcaaa tcaccgacat cttcacggcc aagggcaacg cggcgtgggc
     1861 gcgcgcgaga tccaacgtcg agggcgtggt ttccgacgtc agcgccaagg gtcaagaggc
     1921 cgtcgacgcc gtgcaagagg tcagcgaccg ggtggtcgac gccatcgacg agtcgcttag
     1981 aacgcggccc tacacgacgc tagccatggc gctcggcatc ggattcctgt tcggcgcgat
     2041 gtggcgcagg tgacttggcg caggtgacct ggcgctgacc gtgccgcgcc gcttcggcgc
     2101 caatgagtgg aacgcatgag cggctggctg cggtacttcg ccctgaacgc ccaggtccgt
     2161 accggcctca gcgcagcagt cctgatctgg gcgatcgtcg gcgccgcggc cgccgtcggc
     2221 gcggcgatct ttcttctcgc cgccctgttc gtctggctcg cacagcttta tggcgcgttg
     2281 atcgccgcgg tcgcgctggg ctgcgccttc gtgctcatcg cgctgatcgc gctcgcggtg
     2341 tgtctcatga cccgccgccg caatatggag cgcgcccggc tcgagctcgc cgcccgcagc
     2401 agcaattggt ttgatcccaa gctcgtgacg gtgggcgtgc agatcgcgca acagatcggc
     2461 tggcgccggc t
//
LOCUS       DATCWM010000593         2457 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_382198, whole genome shotgun sequence.
ACCESSION   DATCWM010000593 DATCWM010000000
VERSION     DATCWM010000593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2457)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2457)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2457
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_382198"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            262..570
                     /locus_tag="VIQ50_11635"
     CDS             262..570
                     /locus_tag="VIQ50_11635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361077.1"
                     /translation="MRTTRTAVSIGLVASILGLGMLLASPADARTKYRQQPTTRTGYP
                     VQYSYGTPGVYRNTPPGNIVCWTPCGQPGSIVMGADPDPFIRQQILRDASGFFGGGGR
                     "
     gene            634..915
                     /locus_tag="VIQ50_11640"
     CDS             634..915
                     /locus_tag="VIQ50_11640"
                     /inference="COORDINATES: protein motif:HMM:NF016162.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF427 domain-containing protein"
                     /protein_id="HEY9361078.1"
                     /translation="MKAIWRDEVIAESDRTLEVGGYRYFPRESVRMELLKRVPKTQSD
                     LDCPHGVQFYDLATEAARSERAAWSYEAPRAAMKEVDHWIGFWNDVHVE"
     gene            complement(953..1834)
                     /locus_tag="VIQ50_11645"
     CDS             complement(953..1834)
                     /locus_tag="VIQ50_11645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008129831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY9361079.1"
                     /translation="MGLGVLIAMVSSALGGTAAAVTRYLVGDADPLTLAVLRWGIGFL
                     CVLPVALLLRVRWPMRRDWPAVAALGICFFGLFFILYNIAVGYTTAARASLALSTLPL
                     QTMLIAALLGAEPLSLRKSAGVGVAMLGVFAALASGLSQAPAGAWRGELIMTAAVLCM
                     AVYNVLARPLMQRSSALGFLTVGMGFGAAGLTLAGVATNRISVLADFGAPQWIAGVYL
                     GVGGGALAFILWVLALQRATPTQVANTMTLNPIAAALLATQLVDEPITLNLVAGVIAV
                     CLGIWIATTDAAKKCSD"
     gene            1915..>2457
                     /locus_tag="VIQ50_11650"
     CDS             1915..>2457
                     /locus_tag="VIQ50_11650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011652354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY9361080.1"
                     /translation="MPREKNFAAVLRSYRQRRGWSQLDLAQHAEISQRHLSFLELGRA
                     APSRDMVARLAATLDLPFRQQNALLLAAGFAPLWRETELSAPELVQVRKALDYIMGQQ
                     EPFPAVAVDRHWNLLKANDGMTRLTEFLVGPLPPDTKVNLADALVAPDVLRPFLVNWE
                     DVVRYFIRSVEADAAADGTPE"
BASE COUNT          462 a          799 c          792 g          404 t
ORIGIN      
        1 cgacttactt acggagaggc cgcagccggc gcaagccgca ccgggccggc atcgcaccgt
       61 ttggtcgcgc gccgagctca cggcatcagc cccccacgtg ttaccgcagg taaggggcgt
      121 tcaatagccg caccctatcc cgcgccgcag cgcacgatgg ccggcggtgg tgacacggag
      181 ttgtgatggc tctcgactgg cctgcggcgt cgccgggcgc catatttgcg aacgcgggga
      241 cggaaacacc tggaggattc catgcgcacc actaggacag cggtctcgat tggattggtc
      301 gcgtccatcc tcggtctcgg aatgctcctc gcctctcccg ccgatgctcg gacgaagtac
      361 cgtcagcagc ccactaccag gacgggatac ccggtgcagt actcctacgg cacgccgggc
      421 gtgtaccgga atacaccgcc gggcaacatc gtctgttgga cgccctgcgg gcagccgggg
      481 tccattgtga tgggcgccga ccccgatccc ttcatccgtc agcagattct gcgcgacgca
      541 agtggcttct tcggcggggg cggcaggtag gcgcttcccg cgctcgcagg aaacgcggcg
      601 gcactgacgg actcgctcaa ggatttattc ccgatgaaag cgatctggcg ggatgaggtg
      661 atcgcggaaa gcgaccgcac cctcgaagtg ggcggttacc ggtatttccc ccgcgaaagc
      721 gtgcgcatgg agttgctcaa gcgcgtgccg aagacgcaga gcgacttgga ctgcccgcac
      781 ggcgtccaat tctacgacct tgcgacagag gccgcgcgca gcgagcgcgc ggcgtggtcg
      841 tacgaggcgc cgcgcgcggc gatgaaagag gtcgatcact ggatcggttt ctggaacgac
      901 gtccacgttg agtgaacttg cggtccgaca aatggccggc aagcaacgtg cctcagtctg
      961 aacacttctt tgcagcatcg gtggtggcga tccaaatgcc gagacacacc gcgatgacgc
     1021 ctgcgacgag gttcaacgtg attggttcgt cgacgagctg agtggcgagc agcgctgctg
     1081 cgattggatt tagcgtcatg gtgttggcca cctgcgtcgg cgttgcgcgc tgcagcgcca
     1141 gcacccagag aatgaacgcg agcgcgccgc cgcccactcc caaatagacg ccggcaatcc
     1201 attgcggcgc gccaaagtcg gcgagaaccg aaatgcgatt ggtagcgacg ccggcgagcg
     1261 tgagccccgc cgcgccaaat cccatgccga ccgtgaggaa cccgagggcg ctcgatctct
     1321 gcatcaacgg gcgcgccaag acgttataga ccgccatgca caaaaccgcg gctgtcatga
     1381 tcaattcacc gcgccaggcg ccggccggag cctgggaaag acccgacgca agcgctgcaa
     1441 acacgccgag catggcaacg ccgacgcctg ccgacttgcg caagctcagt ggttcggcgc
     1501 cgagcagcgc ggcgatgagc atcgtctgca gcggcagcgt cgagagggca agacttgcgc
     1561 gggccgcggt cgtgtaaccg accgcgatat tgtacagaat gaaaaatagc ccgaagaagc
     1621 aaatgcccaa cgccgcaacg gcgggccaat cgcgacgcat tggccaccgc acgcgcagaa
     1681 gcagcgcgac cggcagcacg cagagaaagc cgatgcccca gcgcaggacg gcaagcgtaa
     1741 gtggatcggc atcgccgacc agatagcgcg tgaccgccgc ggccgtgccg ccgagcgcgc
     1801 ttgagaccat tgcgatcagg acgccaagtc ccaatcccgc cctcctgccc tgccgaacac
     1861 ggatgtggca ttttcctcct cggcgtcgtg tttgcaacta cctgggaggt atccatgccg
     1921 cgcgagaaga actttgcggc ggtgcttcgc tcgtatcggc agcgccgcgg ctggtcgcag
     1981 ctcgacttgg cgcaacacgc ggagatttcg cagcgtcacc tcagcttctt ggagctcgga
     2041 cgcgccgctc cgagccgcga catggtcgct cgcttggctg ccacgctcga tcttccgttc
     2101 cggcagcaaa acgcgttgct gctcgctgcc ggttttgccc cgctttggcg cgagaccgag
     2161 ctcagcgcac ccgagctcgt gcaggtgcgt aaagcgctcg attacatcat gggccagcag
     2221 gagccttttc ccgcggtggc ggtcgaccgc cactggaacc tgctcaaagc caacgatggc
     2281 atgacgcgcc tgacggagtt tcttgttggg cccttgccgc cggataccaa ggtcaatctc
     2341 gccgacgcct tggtcgcgcc cgatgtgttg cgcccgttcc tcgtcaattg ggaggacgtc
     2401 gtgcgctatt tcatccgaag cgtggaggct gatgctgccg cggatggcac gcccgag
//
LOCUS       DATCWM010000594         4377 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_447193, whole genome shotgun sequence.
ACCESSION   DATCWM010000594 DATCWM010000000
VERSION     DATCWM010000594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4377
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_447193"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..396)
                     /locus_tag="VIQ50_11655"
     CDS             complement(<1..396)
                     /locus_tag="VIQ50_11655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY9361081.1"
                     /translation="MPPAVSLSQVSVRFRLAAGGTYPAVEDASLAVAAGEFVAIVGPT
                     GCGKSTLLNVAAGLIAPSSGRIDVFGAPLAGLNRQAGYLFQAEALFPWKTALDNVAIG
                     PRRVLGMNHVDARALAAEQLARVRLSEHAM"
     gene            complement(427..1446)
                     /gene="ilvC"
                     /locus_tag="VIQ50_11660"
     CDS             complement(427..1446)
                     /gene="ilvC"
                     /locus_tag="VIQ50_11660"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018319725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HEY9361082.1"
                     /translation="MRVYYDRDADINLIKGKKVAIIGYGSQGHAHALNLRDSGVKNVA
                     VALRKGSQGVKKAQAEKLKVMDVTAAAKWADVMMMLTPDELQADIYRDHLADNMKDGA
                     ALMFAHGLNIHFNLIEPRADLDVMMIAPKGPGHTVRAEYQRGAGVPVLMAVHKDVSGN
                     AHDLTLSYGAAIGGGRAGIIETTFREECETDLFGEQSVLCGGLVELMKAGYETLVEAG
                     YAPEMAYFECVHEVKLIVDLIYEGGIATMNYSVSNTAEYGEYVSGPRVVNDETRAEMK
                     RILADIQSGKFAKEWMLENRVNQTAFKAMRAKMAAHPIEEIGAKLRAMMPWIKQRALV
                     DRSRN"
     gene            complement(1544..2080)
                     /gene="ilvN"
                     /locus_tag="VIQ50_11665"
     CDS             complement(1544..2080)
                     /gene="ilvN"
                     /locus_tag="VIQ50_11665"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006932838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990610 - acetolactate synthase regulator
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HEY9361083.1"
                     /translation="MNTTHYPAASVSQQIETHTLSVLVDNEPGVLARVIGLFSGRGYN
                     IDSLTVSETEHEKHLSRITIVTRGTPMVIEQIKNQLDRLVPVHRVIDMTVAGPHIERE
                     LAMVKVRGKGEHRMEALRLADAFRARVIDASTESFVFEITGASEKIESFVALMIPLGL
                     VEVSRTGIVAIGRGPEGM"
     gene            complement(2100..3860)
                     /locus_tag="VIQ50_11670"
     CDS             complement(2100..3860)
                     /locus_tag="VIQ50_11670"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 3 large subunit"
                     /protein_id="HEY9361084.1"
                     /translation="MDKEMTGAEMVIEALADQGVEHLFGYPGGAVLPIYDALFHQQKV
                     QHILVRHEQGAVHAAEGYARSTGKVGCVLVTSGPGATNAVTGLTDALMDSIPLVCLTG
                     QVPTHLIGNDAFQECDTVGITRPCTKHNYLVKTIGDLPRVLHEAFHIAKSGRPGPVVV
                     DIPKDIQFAKGIYSRPREFQHKGYRPKVKGDLERIKLAIDLMRHAKRPLFYTGGGVVN
                     SGPEASHLLRELVKLTGFPITSTLMGLGAYAASDPQWLGMLGMHGTYEANMSMHGCDV
                     MICIGARFDDRITGRLDAFSPGSKKIHVDIDPSSINKNVKVDLPIIGDCAHVLEDMVR
                     LWRSTAVHADKTALEAWWKQIDNWRARKSLAYKNSNELIKPQYAIGRLYELTKDRDTY
                     ITTEVGQHQMWAAQFYRFEQPNRWMTSGGLGTMGYGLPAAVGVQLAHPNSLVIDIAGE
                     ASVLMTMQEMSTAVQYELPIKIFIINNQYMGMVRQWQELLHGGRYSHSYTEALPDFVK
                     LAEAYHAVGIRCERPGDVDGAIREMIAVNRPVIFDCVVDPNENCFPMIPSGRAHNEML
                     LGDATVSVEEAITEEGKVMV"
BASE COUNT          724 a         1407 c         1409 g          837 t
ORIGIN      
        1 catcgcgtgc tccgacaaac gcacgcgggc gagctgctcg gctgcgagcg cgcgcgcgtc
       61 gacgtgattc atgccgagta cgcgccgtgg cccgatcgcc acgttgtcga gcgcggtctt
      121 ccagggaaac agcgcctccg cttggaacag gtaacccgcc tgccggttga ggccggcaag
      181 cggcgcgccg aacacgtcga tgcggcccga ggagggcgca atcagccccg ccgcgacgtt
      241 gagcaaagtc gatttgccgc agccggtcgg gccgacgatc gcgacgaact cgccggcggc
      301 aaccgcaagc gaagcatcct cgaccgcagg atatgtgccg ccggcggcaa ggcgaaacct
      361 cacgctgact tgcgagagcg aaacggcggg cggcatccgg cgagcccgtc ggcgcggacg
      421 tcgcaatcag ttccggctgc gatcgaccag cgcgcgctgc ttgatccacg gcatcatggc
      481 gcgcagcttg gccccgatct cctcgatcgg atgcgccgcc atcttggcgc gcatcgcctt
      541 gaacgcggtt tgattgaccc ggttttccag catccactcc ttggcgaatt tgcccgactg
      601 gatgtcggcg aggatgcgct tcatctcggc gcgcgtctcg tcgttgacga cgcgcgggcc
      661 cgagacgtat tcgccgtact cggcggtgtt cgagaccgaa tagttcatgg tggcgatgcc
      721 gccttcgtag atgaggtcga cgatcagctt gacctcgtgc acgcattcga aataggccat
      781 ttccggcgca tagcccgcct cgaccagcgt ctcgtaaccc gccttcatca attcgaccaa
      841 tccgccgcat agcaccgact gctcgccgaa cagatccgtc tcgcattcct cgcggaatgt
      901 cgtctcgatg atccctgccc ggccgccgcc gatcgccgcc ccgtacgaga gggtaaggtc
      961 atgggcattg cccgagacat ccttgtgcac cgccatcagc acggggacgc cggcgccgcg
     1021 ttggtattcg gcgcgcacgg tgtggccggg acccttgggc gcgatcatca tcacgtcgag
     1081 atcggcgcgc ggctcgatca ggttgaagtg gatgttgagg ccgtgcgcaa acatcagcgc
     1141 cgcgccgtct ttcatattgt cggcgaggtg gtcgcgatag atgtcggcct gaagctcatc
     1201 gggggtgagc atcatcatca cgtcggccca tttggcggcg gcggtgacgt ccatgacctt
     1261 gagcttctcg gcctgcgctt ttttgacgcc ctgcgagccc ttgcgcagcg cgaccgccac
     1321 gttcttgacg ccggagtcgc gcaggttgag ggcgtgggcg tgaccctggc tgccgtagcc
     1381 gatgatggcg accttcttgc ccttgatcag attgatgtcg gcgtcgcgat cgtaataaac
     1441 gcgcatggtt ctcacccctc cctcggtcca gatcttggcc gctgcctctg ccgtgctgct
     1501 tctaggttca atgggggacg gcgacaagcc cggcgcctaa cgctcacatc ccctccggcc
     1561 cgcgcccgat cgcgacgatg ccggtgcgcg aaacctcgac cagcccgagc ggaatcatga
     1621 gcgccacgaa gctctcgatc ttctcgctcg cgccggtgat ctcgaacacg aagctttcgg
     1681 tcgaggcgtc gatcacgcgg gcacgaaagg cgtcggcgag ccgcagcgcc tccatgcggt
     1741 gctcgccctt gccgcgcacc ttgaccatgg cgagctcgcg ctcgatgtgc ggcccggcca
     1801 ccgtcatgtc gatcacgcgg tgcaccggca cgagccggtc gagctggttc ttgatctgct
     1861 cgatcaccat gggcgtgccg cgggtgacga tggtgatgcg ggaaaggtgc ttctcgtgct
     1921 cggtttcgga gaccgtgagc gaatcgatgt tgtagccgcg gccggagaac agcccgatca
     1981 cccgcgccag cacgcccggc tcgttgtcga ccagcaccga cagcgtgtgg gtctcgatct
     2041 gctgagacac gctggcggcg ggatagtggg tggtgttcac gacacttgct ccggcgcgct
     2101 cacaccatca ccttgccttc ctcggtgatg gcttcctcga cgctcacggt ggcgtcgccg
     2161 agcagcatct cgttgtgggc gcggcccgag ggaatcatcg ggaagcaatt ctcattggga
     2221 tcgaccacgc aatcgaagat caccggcctg ttcacggcga tcatctcgcg gatcgcaccg
     2281 tcgacgtcgc cggggcgctc gcagcgaata ccgacggcgt gataggcctc ggccagcttg
     2341 acgaaatccg gcaacgcctc ggtataggag tgcgagtagc ggccgccatg caggagctcc
     2401 tgccattggc gcaccatgcc catgtactga ttgttgatga tgaagatctt gatcggcagc
     2461 tcgtactgca ccgccgtcga catttcctgc atggtcatca gcaccgaagc ttcgccggcg
     2521 atgtcgatga ccagcgaatt cgggtgcgcg agttgcacgc cgaccgccgc cggcaggccg
     2581 tagcccatgg tgccgagacc gccggacgtc atccagcggt tgggctgctc gaagcggtag
     2641 aactgggccg cccacatctg gtgctgcccg acctcggtcg tgatgtaagt gtcgcggtct
     2701 ttggtgagct cgtagagccg gccgatggcg tattgcggct tgatcagctc gttcgaattc
     2761 ttataggcga gcgatttgcg ggcgcgccaa ttatcgatct gcttccacca ggcctcgagc
     2821 gcggttttgt ccgcgtgcac ggcggtggaa cgccatagcc gcaccatgtc ctcgaggacg
     2881 tgggcgcagt cgccgatgat cggcaggtcg accttgacgt tcttgttgat cgacgacgga
     2941 tcgatatcga cgtggatctt cttcgatccg ggcgagaagg catcgagccg accggtgatg
     3001 cggtcgtcga agcgcgcgcc gatgcagatc atcacgtcgc aaccgtgcat cgacatgttg
     3061 gcctcgtagg tgccgtgcat gccgagcatg cccaaccatt gcggatcgga ggcggcgtag
     3121 gcgccgagcc ccatcagtgt cgaggtgatg ggaaaaccgg tgagcttgac cagctcgcgt
     3181 aggaggtggc tcgcctccgg gccggaattg accaccccgc cgccggtata gaacagcggg
     3241 cgcttggcat gccgcatcag gtcgatcgcc agcttgatgc gctcgaggtc gcccttgacc
     3301 ttgggccggt agcccttgtg ctggaactct cggggccgcg agtagatgcc cttggcgaac
     3361 tggatatcct tcgggatgtc gaccaccacc gggccgggcc tgccgctctt ggcgatatgg
     3421 aacgcctcgt gcagcacgcg cggcagatcg ccgatggtct tgacgagata gttgtgcttg
     3481 gtgcacgggc gcgtgatgcc gaccgtgtcg cactcctgga atgcgtcgtt gccgatgagg
     3541 tgggtcggca cctggccggt gagacacacc agcgggatcg agtccatgag cgcgtcagta
     3601 agcccggtga cggcgttggt ggctccgggg ccggaggtca ccaggacgca gccgaccttg
     3661 ccggtcgagc gcgcataccc ctccgcggcg tgcaccgcgc cttgctcgtg ccgcaccagg
     3721 atgtgctgca ccttctgctg gtggaagagc gcgtcataga tcggcagcac cgctccgccg
     3781 gggtagccga acaggtgctc gacgccctgg tcggccagcg cctcgatcac catttccgcc
     3841 ccggtcattt ccttgtccat cgtccactcc attcgcctcc gcggaaaatc aaaaagggcc
     3901 acgagggccc tttgcgcacc gccacgttcg cagatggcct agccatccac ggcggtgcgc
     3961 cttcgcacga ttacgagcac ttgagcaata aagttgcgca tccgcgcacc ctttcgtcac
     4021 ttcgttgccg atccttatat gggctggaac gagaccagtc aagcaaaccc gactcatccg
     4081 cggcgctgcc gaaatcgaga gttaacggac ctgatccgag cattggctcc gaccgcggat
     4141 tcgaatggcg cgtggccgca gccggcgcaa atgccgttcc cctcgtcaaa tcgtgattgc
     4201 gggtgacgac gggacgcgcg catttgattg ggcgttatct catctacttg tatgttcgcc
     4261 gtcgctggag cgggcgtgac gtatgccatt tcttcgcgag aggtccgggc gctggtcgcc
     4321 ggtgaagatc agcgccttcg tggcggcgct gctgccggcg ctctggattg cctatca
//
LOCUS       DATCWM010000595         2274 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_42387, whole genome shotgun sequence.
ACCESSION   DATCWM010000595 DATCWM010000000
VERSION     DATCWM010000595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2274)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2274)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2274
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42387"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..324)
                     /locus_tag="VIQ50_11675"
     CDS             complement(<1..324)
                     /locus_tag="VIQ50_11675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361085.1"
                     /translation="MRPSTADGWYVLPIIVVSFRKFRGKKPAARRPVNAYNRMGGQRS
                     PVMILTHPPSWPDLFQPFTSFVIEEACKTWMPAAQARSRASSGALCAGMTESFDRGVF
                     LPDAAR"
     gene            281..>2274
                     /locus_tag="VIQ50_11680"
     CDS             281..>2274
                     /locus_tag="VIQ50_11680"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HEY9361086.1"
                     /translation="MIGKTYQPSAVEGRIYAAWEEAGAFRAGRPERRDAKPYCIVIPP
                     PNVTGSLHMGHALNNTLQDVLVRFERMRGRDVLWQPGTDHAGIATQMVVERQLMERQE
                     PPRRVLGREKFLEKVWAWKAEAGGTITQQLRRLGASCDWSRERFTMDEGLSRAVRKVF
                     VELYRAGLIYKDKRLVNWDPKLVTAISDLEVQQVEMKGHLWHIRYPLEGTAFDPDDPS
                     TFITVATTRPETMLGDVAVAVHPDDERYRHLVGRHAVLPLVGRRIPIVADEYSDPEKG
                     TGAVKITPAHDFNDFEVGRRHDLPLVNVLDAQAHLKLAGNDAFLRDVPGSPELDLTLA
                     YDGLDRFVARKEIVRRLEGAGLLAKTEPHTHTVPHGDRSAVVIEPFLTDQWYADAKTL
                     AAPAIAAVRGARTAFVPRNWEATYFNWMENIQPWCISRQLWWGHQIPAWYGPDGKVFV
                     AESEAEALNLAMAHYATDGTLSSAAADDMRRAGAKLTLLTRDEDVLDTWFSSALWPFS
                     TLGWPDETPEVARYYPTDVLLTGFDIIFFWVARMMMMGLHFMQEVPFHTVYIHALVRD
                     ERGAKMSKSKGNVIDPLELIDEYGADALRFTLAAMAAQGRDIKLSTQRVEGYRNFATK
                     LWNACRFAEINHCATVPSFNPASAKETLNRWIAHETGKAVR"
BASE COUNT          411 a          749 c          745 g          369 t
ORIGIN      
        1 gcgcgccgcg tcgggcagga acacgccgcg atcaaatgac tccgtcatgc ccgcgcatag
       61 cgcgccggaa gacgcgcgtg aacgcgcttg tgccgcgggc atccacgtct tgcatgcttc
      121 ctcgatgacg aaagacgtga atggctggaa caagtccggc catgagggtg ggtgggtcag
      181 gatcatcaca ggacttcgtt gcccgcccat ccggttgtag gcgttgacag ggcgccgcgc
      241 cgcgggcttt ttaccgcgaa atttccggaa cgatacaaca atgatcggca agacatacca
      301 gccatccgcg gtggaggggc gcatctacgc cgcatgggaa gaggctggtg cgttccgcgc
      361 gggccggccc gagcggcgcg atgccaagcc ttattgcatc gtgatcccgc cgcccaacgt
      421 cacaggctcg ctgcatatgg ggcatgcgct caataacacg ctgcaggacg tgctggtccg
      481 cttcgagcgc atgcgcgggc gcgacgttct ctggcagccg ggcaccgatc acgccggcat
      541 cgccacgcag atggtggtcg agcgccagct tatggagcgg caggagccgc cgcggcgcgt
      601 gctcgggcgg gaaaaattcc tcgagaaggt gtgggcgtgg aaggccgagg cgggcggcac
      661 catcacgcag cagctcaggc ggctcggcgc ctcctgcgac tggtcgcgcg aacgcttcac
      721 catggacgag ggcctctcgc gcgcggtgcg caaagtgttc gtggagcttt atcgcgccgg
      781 cctcatctat aaggacaagc ggctggtcaa ttgggacccg aagctcgtca ccgccatctc
      841 cgacctcgaa gtgcagcagg tcgagatgaa gggacacttg tggcatatcc gctacccgct
      901 cgaaggcacg gcgttcgatc cggacgatcc ctcgaccttc atcaccgtcg cgaccacgcg
      961 gccggagacc atgctcggcg acgtcgcggt cgcggtgcat cccgacgacg agcgctaccg
     1021 gcatctcgtc ggccggcacg cggtcctgcc gctggtcggc cggcgcattc ccatcgtcgc
     1081 cgatgaatac tccgatccgg agaaaggcac cggcgcggtg aagatcacgc ccgcgcacga
     1141 cttcaacgac ttcgaggtgg gccggcggca cgacctgccg ctcgtcaacg tgctcgatgc
     1201 gcaagcgcat ctcaagcttg cgggcaacga cgcatttctg cgcgacgtgc cgggctcgcc
     1261 ggagctcgac ctaaccttgg cctacgatgg gctcgatcgc ttcgttgcac gcaaggagat
     1321 tgtgcgccgg ctggagggag cgggtctcct cgccaagacc gagccgcaca cccacacggt
     1381 gccgcacggc gaccgctcgg ccgtcgtgat cgaacccttt ctgaccgatc aatggtacgc
     1441 cgacgccaag acgctggcgg cacccgcgat cgcggcggtg cgtggcgctc gcacggcatt
     1501 cgtgccgcgc aattgggagg cgacttattt caactggatg gagaacatcc agccatggtg
     1561 catctcgcgc cagctgtggt gggggcacca gatcccggct tggtacgggc cggacggcaa
     1621 agtgtttgtc gccgagagcg aggccgaggc gctgaacctg gcgatggccc attacgccac
     1681 cgacggcacg ctctcgagtg ccgccgccga cgacatgcgc cgagcgggag caaaattgac
     1741 gctgctcacg cgcgacgagg acgtgctcga cacctggttc tcctccgcgc tctggccgtt
     1801 ctcgacattg gggtggccgg acgagacccc ggaggtcgcg cgctactacc cgacagacgt
     1861 gctgttgacc ggcttcgaca tcatcttctt ctgggtcgcg cgcatgatga tgatgggcct
     1921 gcacttcatg caagaagtgc cgttccacac cgtctatatc cacgcgctcg tgcgcgacga
     1981 gcgcggcgcc aagatgtcga agtcgaaagg caacgttatc gacccgctcg agctcatcga
     2041 cgagtacggc gccgacgcgc tgcgcttcac gctcgccgcc atggcggcgc aagggcgcga
     2101 catcaagctc tccacccagc gggtcgaagg ctaccgcaat ttcgcgacca agctgtggaa
     2161 cgcttgccgc ttcgcggaaa tcaaccattg cgcgaccgtg ccgagcttca acccggcgtc
     2221 ggcgaaggaa acgctcaacc gctggatcgc gcacgagacc ggcaaggccg tgcg
//
LOCUS       DATCWM010000596         3146 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_366115, whole genome shotgun sequence.
ACCESSION   DATCWM010000596 DATCWM010000000
VERSION     DATCWM010000596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3146
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_366115"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..284
                     /locus_tag="VIQ50_11685"
     CDS             <1..284
                     /locus_tag="VIQ50_11685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009797414.1"
                     /note="Acylates the intermediate (KDO)2-lipid IVA to form
                     (KDO)2-(lauroyl)-lipid IVA; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase"
                     /protein_id="HEY9361087.1"
                     /translation="NGVDVTFFGRRCKANPFIARLTRHIECPIHGTRIIRLPDQHRFR
                     VDLSEAIEPRRDEAGRIDIAGTMQAITSVVEGWIREHPEQWLWVHRRWR"
     gene            complement(316..1419)
                     /locus_tag="VIQ50_11690"
     CDS             complement(316..1419)
                     /locus_tag="VIQ50_11690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEY9361088.1"
                     /translation="MRLPIRLALAVAACAAIAPAAAQPKRERIVNIYNWSDYIAPTVV
                     EDFTKETGIKVRYDTFDSNDTLETKLLAGKSGYDVVVPTAYFLERQIKAGVFQKLDKE
                     KLPNLANMWPEITQRLAAYDPGNQYAVNYMWGTTGVGYNARKAREILGANGTVDSWDI
                     VFKPENLAKFKDCGVHMLDSSDDVLAAALHYLGLDPNSSNEADLQKAADLMMKIRPYV
                     RKFHSSEYLNALAAGEICLVLGFSGDVKQSQKRAAEAKNGVEIAYAIPKEGAQLWFDN
                     LSIPRDAKNVAEADEFINYLQRPEVAAKNTNFISYANGNLASQKFIDKDILDDKTIYP
                     DDATMRRLYTISAHDPKTQRLINRLWTRIKTGR"
     gene            complement(1504..1839)
                     /locus_tag="VIQ50_11695"
     CDS             complement(1504..1839)
                     /locus_tag="VIQ50_11695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEY9361089.1"
                     /translation="MPAQLGRENVHDVPPEEVARGLAEGKILLVDVREPSETEVERYP
                     EAFYLPMSEFDPAAIPDPAGRRVVFACRSGNRSVTASLIAQAAGLPYDAHLAGGIKAW
                     KELGLPTAS"
     gene            complement(2001..>3146)
                     /locus_tag="VIQ50_11700"
     CDS             complement(2001..>3146)
                     /locus_tag="VIQ50_11700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011927514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HEY9361090.1"
                     /translation="PIQTAWLSIVLPALTVNYLGQGALVLADPKSIENPFFLLYPDWA
                     LLPMVVLATAATVIASQAVITGAYSLTRQAIQLGLLPRLEIRHTSEALFGQIYMPRVN
                     LLLLVGVLLLVALFRSSSALASAYGIAVTGTMVVTVTMAFVVIWRVWRWPPFAAAALI
                     APFLLIDVTFLGANLLKVIEGGWVPLALGGLVMVVMYTWRRGSRLLLEKTRRQEMSLD
                     DLVRILEKKPPTRVPGTAVFLTSTPHAAPTALMHSLKHYKVLHEHNVILTIETADTPR
                     VEAAERVRMKKLGATFACVTLRFGFMETPNVPKALAIARKLGWTFDIMSTSFFLSRRS
                     LKPAAHSGMPRWQDRLFIMLTRIANDATDYFQIPTGRVVEVGTQVTI"
BASE COUNT          591 a          959 c         1003 g          593 t
ORIGIN      
        1 tcaacggcgt cgacgtgacg ttcttcggcc gccgctgcaa agccaacccc ttcatcgccc
       61 gtctcacccg ccacatcgaa tgcccgattc acggcacgcg catcatccgt ctccccgacc
      121 aacatcgctt ccgtgtggac ctcagcgaag ccatcgagcc gcggcgcgac gaggccggaa
      181 ggatcgatat cgccggcacc atgcaagcga tcacgtcggt ggtcgaagga tggatacgcg
      241 agcaccccga gcagtggcta tgggtgcatc ggcgctggcg ctgacgcgcg ctacggcgaa
      301 ccggcgaaca tcgcgctacc tgccggtttt gatcctggtc cacagccggt tgatcagccg
      361 ctgcgtcttc ggatcatgcg cgctgatggt gtaaagccgg cgcatggtcg cgtcgtcggg
      421 gtagatcgtt ttgtcgtcca ggatatcctt gtcgatgaat ttctggctgg ccaaattgcc
      481 gttggcgtag gaaatgaaat tcgtattctt ggccgccacc tccggccgct gcaagtaatt
      541 gataaactcg tccgcttccg cgacgttctt ggcgtcgcgc gggatggaga gattgtcgaa
      601 ccacagttgc gccccttcct tcgggatagc gtaggcgatc tcgaccccgt tcttggcttc
      661 cgccgcgcgc ttttgcgatt gcttgacatc gccggagaat ccgagaacga gacagatctc
      721 gccggcggcg agcgcgttga ggtattcgga cgagtggaat ttgcggacat aaggcctgat
      781 cttcatcatg agatcggcgg ccttctgcag atcggcctcg ttgctgctgt tgggatccag
      841 accgagatag tgcaatgccg ccgccaggac gtcgtcggag gaatcgagca tatgtacgcc
      901 gcaatccttg aacttggcca ggttctcggg cttgaagacg atatcccagc tgtcgactgt
      961 gccgttcgct cccaggatct cgcgcgcttt tcgggcgttg tatccgacgc ccgtcgtgcc
     1021 ccacatgtag ttgaccgcgt actggttgcc gggatcatac gccgccaatc gctgcgtgat
     1081 ctccggccac atattcgcga gattgggtag cttctccttg tcgagctttt ggaatacgcc
     1141 agccttgatc tgccgctcga gaaaataggc cgtgggcacc accacgtcgt agccggattt
     1201 gccggccaga agcttggtct ccagcgtatc gttggaatcg aaggtgtcgt agcgaacctt
     1261 gattcctgtc tccttggtga agtcttcgac cacggtcgga gcgatgtagt cggaccaatt
     1321 atagatattg acgatgcgct cccgcttcgg ttgagcggca gcgggcgcga tcgccgcgca
     1381 ggcggctacg gccagagcga gccggatcgg taggcgcatc gaagatctcc gtggaagcat
     1441 tgcagaggcg ggcgggtgta gggccgattg ctggaaacgg taggcgtttg gcggcggtgt
     1501 gcgtcagctg gcggtgggca ggccgagctc cttccacgct ttgatgcctc cggcaagatg
     1561 cgcgtcgtag ggcaaccccg cggcctgtgc gatcagcgaa gccgtgaccg agcggttgcc
     1621 ggagcggcaa gcgaacacga cccggcgccc cgccggatcg ggaattgcgg ccggatcgaa
     1681 ctcggacatc gggaggtaga acgcctccgg ataacgctcg acttcggtct cgctcggctc
     1741 gcgcacgtcg accagcaaaa ttttgccttc cgcgagccct cgcgccacct cctcgggcgg
     1801 cacatcatgc acgttctctc ggccaagctg agcgggcatg ggaatctagc tcctttccga
     1861 tgcgcatcgg ggtaagcaca caggtcgcgc gtcagcgtcc aagaatcaag ggagtacgcc
     1921 tacggttcgg catcacgcta accccttcgc cattccaagc atcattccgg cgcgatccat
     1981 aatcggggcc cggcgtcgcg tcagatcgtc acctgtgttc ccacctccac cactcgcccg
     2041 gtggggatct ggaaataatc agtggcgtca ttggcgatgc gggtgagcat gatgaacaga
     2101 cgatcctgcc aacgcggcat gccggaatgg gcggccggct tgagcgaacg tcgcgacaga
     2161 aaaaacgagg tcgacatgat gtcgaaggtc caacccagct tgcgggcgat tgcgagtgct
     2221 ttcggcacgt tcggagtttc catgaagccg aagcgtagcg tcacgcaggc gaaggtcgcg
     2281 cccagcttct tcatgcgcac gcgctcggcc gcctccaccc gcggcgtgtc cgcggtctcg
     2341 atcgtcaaga tgacgttgtg ttcgtgcagc accttgtaat gcttgaggct gtgcatgagg
     2401 gcggtcggcg cggcgtgggg cgtgctggtg agaaacacgg cggtgcccgg cacgcgggtc
     2461 ggcggttttt tctccaggat gcgcacgagg tcgtccagcg acatttcctg ccgccgggtc
     2521 ttctcgagca acagacggct gccgcgccgc cacgtataca tcaccaccat caccaggccg
     2581 cccaacgcga gcggcaccca gccgccctcg atcaccttga gcagattggc gccgagaaag
     2641 gtgacgtcga tgagcaggaa gggcgcgatc agcgcggcgg ccgcgaacgg gggccagcgc
     2701 cataccctcc agatcacgac gaaggccatg gtaacggtga ccaccatggt gccggtcacc
     2761 gcgatgccgt aggcggaggc gagcgcgctc gaggaacgga acagcgccac cagcagcaaa
     2821 acgccgacaa gtagcagcag attgactcgc ggcatgtaga tttgcccgaa caacgcctcc
     2881 gacgtgtggc gaatctcgag ccgcggcagc aacccgagct ggatcgcctg ccgggtgagc
     2941 gaataagcgc cggtgatgac cgcttggctc gcgatcaccg tggccgcggt ggccaagacc
     3001 accatcggca gcagcgccca gtcgggataa agcaggaaga agggattctc gatgctcttg
     3061 ggatctgcga ggacgagcgc accctggccg agatagttga cggtgagcgc gggcaacaca
     3121 atgctcagcc aagcggtttg gatcgg
//
LOCUS       DATCWM010000597         3917 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_69329, whole genome shotgun sequence.
ACCESSION   DATCWM010000597 DATCWM010000000
VERSION     DATCWM010000597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3917
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69329"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..221)
                     /locus_tag="VIQ50_11705"
     CDS             complement(<1..221)
                     /locus_tag="VIQ50_11705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006204240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY9361091.1"
                     /translation="MARPLLEVTALSKRFGGFVALDGIDLAVAEGERVGLIGPNGSGK
                     STLVNCICGTLVNETGTVRFNGETVDRLLT"
     gene            complement(221..1165)
                     /locus_tag="VIQ50_11710"
     CDS             complement(221..1165)
                     /locus_tag="VIQ50_11710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9361092.1"
                     /translation="MRTRVFLLLLIAVAIAVFFAARLVNNDYVFFAGYTVLQFVVLAT
                     AWNILGGYTGYVNFGSAAFFALGAYATVFVHKLYPLPIPLLIVIGGGVSGIVGLGMGY
                     LTLRLRGAFFAIATLALAVVLQTLIVNWDFVGGSRGAYIIRPNEIALIGPYIQYLFLL
                     MLALAVIALTVARGIERSQLGYGFATIRDDELAAEASGVPTLRLKLIATTLSGALMGM
                     AGAPFPYYIGYLQPSSAFGLEYAVNSIAMPMIGGTTSWVGPLIGAILLGSLQQLATVT
                     ISSAVNLLIVGLLLVAFVIIAPNGIVGLVQGWTRGRAK"
     gene            complement(1177..2052)
                     /locus_tag="VIQ50_11715"
     CDS             complement(1177..2052)
                     /locus_tag="VIQ50_11715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018517376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9361093.1"
                     /translation="MGLSFDLLINAVIAGILLGGFYTAVTIGVSISFGILDIVNIAHP
                     AFIILGSYIAYIVNTRLGIDPIAVSIIMLPVFYLLGAGVYQVYYESFERRGQEALRGL
                     SFFFGLLFVTEVMLILVFGVDYRYVEAPYIGPSWRLGVMDFPLRMLVPCVTALALFAA
                     LELYLSYTFIGRAIAAVAQDQLALRLMGASPVRIKRIAFGISIATASIAGALLIIIQP
                     VEPSVGREYIGRVFAICVLGGLGSLPGTVIGAMLLGILESFTATFYGPSWAPAVAFGV
                     LLLTLAFRPAGLLGR"
     gene            complement(2371..2820)
                     /locus_tag="VIQ50_11720"
     CDS             complement(2371..2820)
                     /locus_tag="VIQ50_11720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012329588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361094.1"
                     /translation="MALTMLDKQAENSVKSPWPPEIAAEFEREKNNPNPCVGNALVSE
                     SDRVRVWTIRLKPGERIGFHRHVLDYFWTAVTGGRGRQHVHDGTTVEYTYAPGETRHE
                     TYGHGQFKVHDLENLGDKDMVFMTIEFLQSANKPLPLPESVRGQAAA"
     gene            2889..>3917
                     /locus_tag="VIQ50_11725"
     CDS             2889..>3917
                     /locus_tag="VIQ50_11725"
                     /inference="COORDINATES: protein motif:HMM:NF005566.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEY9361095.1"
                     /translation="MRKAKRRALVVGGSMSGLLAALLLRHAGWEVDVFERVERELAGR
                     GAGIVAQPDLIETLRRLGIDPTDLGVEITTRKILDPSGRVAGEFACPQVLTAWERVYR
                     LLRDAFPRQRYHRGRAVSGFVQTERSALAQFADGDAAEGELLVGADGLRSTIRQQCLP
                     HLTPRYVGYVAWRALIPEAAFPAAIHRELFNFMTFCLPPGEQCLGYPVAGPDNDLRPG
                     HRRYNVVWYRPADERAELTRLLTDEAGNTHTISIPPPLIRHEAIGQMRAAAERLLAPQ
                     FREVVRMIDEPILQPIYDLETPRMAFGRVAIIGDAAFVARPHVAAGVAKAADDAAALA
                     AALDLAEVE"
BASE COUNT          749 a         1230 c         1308 g          630 t
ORIGIN      
        1 gtcagcagcc ggtcgactgt ctcgccgttg aagcgcacag tgccggtttc gttcacgagc
       61 gtcccgcaaa tgcagttgac caaggtcgat ttgccggagc cgttgggacc gatcaagccg
      121 acgcgttcgc cctcggcgac ggcgaggtcg atgccatcaa gtgcgacaaa gccgccgaaa
      181 cgtttgctca gagcggtgac ctcgagcagc ggcctagcca tcactttgcc cttccgcgcg
      241 tccagccttg caccaggccg acgatgccgt tcggagcgat aatgacgaac gcgactagca
      301 gcaatccgac gatgagaagg ttgaccgccg aggaaatggt cacggtcgcg agctgctgca
      361 acgatccaag caggatagcg ccgatcagcg ggccgaccca gctggtcgtg ccgccgatca
      421 tcggcatggc gatggaattg accgcgtatt ctagtccgaa cgcagaagag ggctggagat
      481 agccgatgta atagggaaag ggtgctccgg ccatgcccat aagcgcgccg gagagcgtcg
      541 tggcgatgag cttgaggcgc agcgtgggca cgcccgatgc ctccgccgca agctcgtcgt
      601 cgcggatggt ggcgaaaccg taaccgagct gcgagcgctc gatcccgcgc gcaacggtga
      661 gtgcgatgac cgccagcgcg agcatcagca gaaacaggta ttggatatag ggaccgatga
      721 gcgcaatctc attgggccgg atgatgtagg caccgcgcga gccgccgaca aaatcccagt
      781 tgacgatgag agtttgcagc acgacggcga gggcgagcgt cgcgatggcg aagaaggcgc
      841 cgcgcagtcg cagcgtcaga tagcccatgc cgagtccgac gatgcccgat acgccgccgc
      901 cgatcacaat cagcagcggg atcggcagcg ggtacaattt gtgcacgaac acggttgcat
      961 aggcgccgag cgcgaagaac gcggccgagc cgaaattaac gtagccggtg tagccgccga
     1021 ggatgttcca ggcggtcgct agcaccacga attgcagcac ggtatagccg gcgaagaaca
     1081 cgtaatcgtt gttcaccagg cgcgcggcga agaacacggc gatcgcgacc gcgatcaata
     1141 gcagcaggaa gacccgcgtc cgcacgatgg acaatcctat cgtccgagaa gacccgccgg
     1201 tcgaaatgcg agggtgagga gaagcacgcc gaatgccacc gccggcgccc aggaggggcc
     1261 gtagaacgtg gcggtgaagc tctcgaggat gccgagcagc atggcgccga tcaccgtgcc
     1321 gggaaggctg ccgagccctc cgagcacgca gatcgcgaac actcggccga tatattcgcg
     1381 tccgaccgag ggctcgaccg gttggatgat gatcagcagc gcacccgcga tcgaggcggt
     1441 cgcgatggaa atgccgaacg cgatgcgctt gattcgcacc ggcgaggcgc ccatgagccg
     1501 caacgcaagc tggtcttgcg ccacggccgc gatcgcgcgg ccgatgaacg tgtacgacag
     1561 gtagagctcg agcgcggcga acagcgcgag cgcagtgaca cacggcacca gcatgcgcag
     1621 ggggaaatcc atcacgccga gacgccagct cggtccgata tacggcgctt cgacgtatcg
     1681 ataatcgacg ccgaacacga ggatgagcat cacttcggtg acgaacaaca agccgaaaaa
     1741 aaacgacaag ccgcgcagcg cttcctgccc gcgccgctcg aacgactcgt aatagacttg
     1801 gtagacgccg gcaccaagca gatagaacac cggcagcatg atgatgctga ccgcgatcgg
     1861 atcgatcccg agtcgagtgt tgacgatgta ggcgatgtac gagccgagga tgatgaaggc
     1921 gggatgggcg atgttgacga tgtcgaggat gccgaacgag atcgacacgc cgatcgtcac
     1981 ggcggtgtag aatccgccga gcaggatgcc ggcgattacc gcgttgatca gcagatcgaa
     2041 gcttaggccc acctgttccc cctccccacg gctctgtcgc cacggtgctc atggcagcgg
     2101 gcgattgacg gccgtttatc cgtcgtggcc aggttcgtcc tggtcatcac gtcttattga
     2161 ggaaagcaag ccgtggatgc ccgacaagcc cgggcaattg gcgccgttat tgccaccttg
     2221 cgggccagcc caccttcctt gcgtgccagt gtgcaggaag gccttcgcgt tggctagccc
     2281 gtttcacggt gcggtgcgtc gacggctgag cctggccggg cagccggtgc cgtcgcgcat
     2341 ggaaggagag agggcggtcg aggccgcggc ttacgcggcg gcctgccccc gcacgctttc
     2401 cggcagcggc agcggcttgt tggcgctttg caggaattcg atggtcatga agaccatgtc
     2461 cttgtcgccg agattttcga gatcgtggac cttgaactga ccgtgcccat aggtctcgtg
     2521 tcgggtctcg ccgggcgcgt acgtgtattc gaccgtggtg ccgtcatgca cgtgctggcg
     2581 tccgcggccg ccagtcacgg cggtccagaa gtaatcgagc acgtgccggt ggaagccgat
     2641 acgctcgccg ggcttgaggc gaatggtcca cacccgcacg cgatcgctct ccgacaccag
     2701 cgcgttgccg acacaggggt tgggattgtt cttctcccgc tcgaattctg cagcgatctc
     2761 cggcggccac ggcgatttca ccgagttctc cgcctgcttg tccagcatcg tcagggccat
     2821 ggcattcctc caggtttggc ccgatatata tcaatttttc gcggcaggaa acggcaggat
     2881 cgagcggaat gcgcaaggca aagcggcgcg cgctcgtcgt aggcggctcg atgagcggcc
     2941 tcctagccgc gctgctgctg cggcacgccg gctgggaggt tgacgtcttc gagcgggtcg
     3001 agcgcgaact cgcggggcgg ggcgccggca tcgtcgccca gccggacctg atcgagacgc
     3061 tgcgccggct cggcatcgat ccgaccgatc tcggggtcga gatcacgacc cgaaaaatcc
     3121 tcgatccgtc cggtcgcgtg gccggcgaat tcgcgtgccc ccaggtgctg accgcctggg
     3181 agcgtgtcta ccggctgctg cgcgatgcgt tcccgcggca gcgctatcac cgcggccgcg
     3241 ccgtcagcgg cttcgtgcag acggaaaggt cggcgctcgc gcagtttgcc gacggcgacg
     3301 cggcggaggg cgaactgctg gtgggtgcgg atggacttcg ttccacgatc cgccagcaat
     3361 gcctgccgca cctgacgccg cgctacgtcg gctacgtcgc ctggcgcgcg ctcatccccg
     3421 aggcggcgtt tccagcggcg atccaccgcg agctgttcaa tttcatgacc ttctgcctgc
     3481 cgccgggcga gcagtgtctg ggttatccgg tcgccggacc cgacaatgat ctgcgtcccg
     3541 gccatcgccg ctacaacgtg gtctggtacc gtccggcgga cgagcgcgcc gaactcacgc
     3601 gcctgctgac cgatgaggcc ggcaacaccc acacgatatc gatcccgccg ccgctgatcc
     3661 ggcacgaggc gatcgggcaa atgcgcgcgg ccgccgaacg gctgctagca ccgcaattcc
     3721 gcgaagtggt gcgcatgatc gacgagccga tcttgcagcc gatctatgat ctcgagacac
     3781 cgcgcatggc gttcggacgc gtcgccatca tcggcgatgc ggcgttcgtc gcgcggccgc
     3841 acgtcgcggc cggcgtcgcc aaggcggcag acgacgcggc cgcattggcg gcggcgctcg
     3901 acctcgccga ggtcgag
//
LOCUS       DATCWM010000598         2687 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_403934, whole genome shotgun sequence.
ACCESSION   DATCWM010000598 DATCWM010000000
VERSION     DATCWM010000598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2687
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_403934"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..333)
                     /locus_tag="VIQ50_11730"
     CDS             complement(<1..333)
                     /locus_tag="VIQ50_11730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361096.1"
                     /translation="MSMAANKSLKARNQAVRPQVAGSACVAAMLLLLVPLLTLEADAR
                     GGGGGFVGRGGGFGGHGGGFGGGFGGHVGFAGRGGGIGFAGRGAGFGGARSFGVTRIG
                     GTSFGNRPL"
     gene            complement(420..1553)
                     /locus_tag="VIQ50_11735"
     CDS             complement(420..1553)
                     /locus_tag="VIQ50_11735"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEY9361097.1"
                     /translation="MLACSASMRDRIAMYNTNALKLGIFGANCSSGRSATKLPERWSA
                     SWPDCLRLARMADEAGIDFMLPIGRWKGYGGDFHGSTLETVTWAVGLLSATRRMTVFG
                     TVHAPLFHPLIAAKEFVTADHVGEGRFGVNLVVGWNEGEFEMFGVTQREHDTRYAFAQ
                     EWLDVVKQAWSKRGDFNFQGEFLKLKGVRAHPKPYGETRPILMNAGSSQVGQDFALRN
                     CDAFFVATAGSRTSLEGNAKKVDEIKRAAKNFGRDIEVYTVGQVICRASQTEAEEYYR
                     HAIIENADWGAIDGMLANKNITPQTIPPEEYVKKRQYFAANAIGGYPFVGTPDRVADE
                     LASISKAGMRGIALSFVNYLDELPYFCDEVLPRLVRLGVRTAN"
     gene            complement(1596..>2687)
                     /locus_tag="VIQ50_11740"
     CDS             complement(1596..>2687)
                     /locus_tag="VIQ50_11740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9361098.1"
                     /translation="VRDLRKQFAAGRPAVDGVSFHVPAGEIVVLLGPSGCGKTTTLRC
                     IAGLEHPSAGRVSIGGRVMSSPAEGAHVPSRSRNIGMVFQSYAVWPHMTVKQNVAYPL
                     RHRRVSRAEIDRKTAEVLELVGLAQYTDRSVVSLSGGQMQRVALARSLVYQPQLLLLD
                     EPLSNLDAQLRLRLRDDLRRIIKQTGVTAVYVTHDQAEAVVLGDRIGVMRDGKLLQMA
                     PADEIYNRPADLFVAKFTGASNLVAGRVLACNGEFGIVDAGGQRLTALMPATIEAGEG
                     VRIAVRPENVRIGNDVATGAENRFTARVAALRYQGTQTIYELAALGGRLEALELGTRA
                     RHAVGSDVDVLLPPALCWAYPAREEAALE"
BASE COUNT          481 a          931 c          835 g          440 t
ORIGIN      
        1 gagggggcga ttcccaaagc tcgtgccgcc gatgcgcgtc accccgaaag agcgggcacc
       61 gccgaaacct gcgccgcgcc cggcaaagcc tatccccccg ccgcgcccag caaacccgac
      121 atgcccgcca aagcctccgc caaatccccc gccatgcccg ccaaagccgc cgccgcgccc
      181 aacaaaacct ccgccaccgc cgcgtgcatc ggcttcaagc gtgagaagcg gaacgaggag
      241 gagcaacatc gcggccacgc aggcgctgcc cgccacctgc ggccgcacgg cttgattgcg
      301 cgccttgaga gacttgttcg ctgccatgga catggtccct cctcgccccc tccggttctc
      361 accgttgatc atggttttgt catgtcgcga cggtctcgca cagaacggaa gcgaccggct
      421 caattcgccg tccgcacccc gagccgcacc aggcgcggaa gcacttcgtc acagaaatac
      481 ggcagctcgt cgagatagtt gacgaacgag agggcgatgc cgcgcatgcc ggctttgcta
      541 atgctggcga gctcgtccgc cacgcggtcg ggcgttccca cgaacggata gcccccgatc
      601 gcattcgccg caaagtactg acgtttcttg acgtactcct cgggtggaat cgtttgcggc
      661 gtgatgttct tgttcgcaag catgccgtcg atcgcgcccc aatcggcgtt ctcgatgatg
      721 gcgtggcgat agtactcttc cgcctccgtc tggctcgcgc gacagatcac ctggccgacg
      781 gtgtagacct cgatatcccg gccgaagttt ttcgccgcgc gcttgatctc gtcgaccttc
      841 ttggcattcc cctcgagcga agtgcgcgag cccgcggtcg ccacgaaaaa cgcatcgcag
      901 ttgcgcaatg caaagtcctg gccgacttgc gacgagccgg cgttcatgag gatcggccgt
      961 gtctcgccgt aaggcttggg atgggcgcgc acgcccttga gcttgagaaa ctctccctga
     1021 aaattgaaat cgccgcgttt ggaccaggct tgcttgacaa cgtcaagcca ttcttgggcg
     1081 aaagcgtaac gcgtatcgtg ctcgcgctgc gtcacgccga acatctcgaa ttccccctcg
     1141 ttccagccga ccacgagatt gacaccgaag cgtccttcgc cgacgtggtc ggcggtcacg
     1201 aattccttgg ccgcgatcag cgggtggaac aggggcgcgt gcaccgtgcc gaacacggtc
     1261 atgcgccgcg tggccgagag gagccccacc gcccaggtga cggtctctag cgtgctgccg
     1321 tgaaagtcgc cgccgtagcc cttccagcgg ccaatcggca gcatgaaatc gatgcccgcc
     1381 tcgtccgcca tgcgcgcgag gcgaaggcag tccggccaac tcgcggacca acgttccggc
     1441 agcttggtgg ccgagcggcc ggacgagcag ttggcgccaa aaatgccgag cttgagcgcg
     1501 ttcgtgttgt acatggcgat acgatcgcgc atcgatgccg agcaagccag cacgacggtc
     1561 tccgttaggt tcgcgccgca gatccgcgac agcacctact ctaacgccgc ctcctcgcgt
     1621 gcgggatagg cccagcacag cgcgggcggc agaagcacgt ccacatcgct gccgaccgca
     1681 tgccgcgcac gggtgccgag ctcgagcgct tccagccggc cgccgagcgc cgccagctcg
     1741 tagatggttt gtgtgccctg gtagcggagc gccgcgacgc gcgcggtgaa ccgattttcg
     1801 gcgcccgtcg cgacgtcatt accgatgcgg acattctccg gccgcaccgc aatcctgacc
     1861 ccctcgccgg cctcgatcgt cgcgggcatg agggccgtca gtcgctgccc gcccgcatcg
     1921 acgatgccga attcgccgtt gcacgccagc acgcggccgg cgaccaagtt ggatgcgccg
     1981 gtgaacttgg cgacaaagag gtccgccggt cgattgtaga tctcatccgc gggcgccatc
     2041 tgcagcagtt tgccgtcgcg catgacgccg atgcgatcgc cgagcaccac cgcctctgcc
     2101 tgatcgtggg tcacgtagac ggcagtaacg ccagtctgct tgatgatgcg ccgcaagtcg
     2161 tcgcgcagcc gcaagcgcaa ctgcgcgtca agattgctca gcggctcgtc gagcagaaga
     2221 agctggggct gatagaccaa actgcgcgca agcgccacgc gctgcatttg cccgccggac
     2281 agggacacca ccgagcgatc ggtgtattgc gccagcccca cgagctccag tacctcggcg
     2341 gtcttgcggt cgatttcggc gcgcgagacg cggcgatgcc ggagcggata ggcgacgttc
     2401 tgcttgacgg tcatgtgcgg ccagaccgcg taggactgga acaccatgcc gatgttacgc
     2461 gaccgcgacg gcacgtgagc accttccgcc ggcgacgaca tcacccgtcc gccgatactg
     2521 acgcgcccgg cagacggatg ctcgagaccg gcgatgcagc gcagcgtggt ggtcttgccg
     2581 cagccggagg gaccgagcag caccacgatc tcgccggccg gtacgtgaaa gctcacccca
     2641 tccacggcgg gccggccggc ggcgaattgc ttgcgcagat cgcggac
//
LOCUS       DATCWM010000599         3192 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_118072, whole genome shotgun sequence.
ACCESSION   DATCWM010000599 DATCWM010000000
VERSION     DATCWM010000599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3192
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118072"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..885
                     /locus_tag="VIQ50_11745"
     CDS             <1..885
                     /locus_tag="VIQ50_11745"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEY9361099.1"
                     /translation="KPVRRPDRYEDSFIFERKPYTWPGNKTLAIWIAPNVEVWNYDSP
                     VGVGVSPNSGNIVPDVINYGWREYGLRVGLWRFADVFDAAGVKATVALNSLVCEHYPK
                     AVDEMKKRGWEFMGHGTTNSESLAGLNPEREREVIRSVLNTIEQATGRKPRGWLGSGL
                     VETYNTLDILAEEGVIYCGDWNTDDQPYPMKVKTGKLFSIPYCMEINDIPLFIRKGYT
                     GEQYYRSVIDQFETLLADSKKQPRVMGIPLHPMITGQPLRIKYLQRAIAEMQKNDAVW
                     FATGGEIIDAYQRAHPTG"
     gene            complement(907..1326)
                     /locus_tag="VIQ50_11750"
     CDS             complement(907..1326)
                     /locus_tag="VIQ50_11750"
                     /inference="COORDINATES: protein motif:HMM:NF014336.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S1/P1 nuclease"
                     /protein_id="HEY9361100.1"
                     /translation="MGTAPPSFGRCKPPAANLHLYWDSVAVLRAMQAAGSAHSEEDFA
                     KLLAATPPPGWETTGSADTWAAQWASEIMPLAVEAHQRLTIRKGSKPSPFSFTGGCTW
                     ETTLDPSYEDWAKAQARRQLAMAGFRLAALFKAIFEP"
     gene            1386..1511
                     /locus_tag="VIQ50_11755"
     CDS             1386..1511
                     /locus_tag="VIQ50_11755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361101.1"
                     /translation="MPPIVIATLSPIPNDGGVPMMFGSTLVSHVLSKYFAPTCSG"
     gene            1511..2050
                     /locus_tag="VIQ50_11760"
     CDS             1511..2050
                     /locus_tag="VIQ50_11760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361102.1"
                     /translation="MDVADEVREQPKRFGVGEVHIGLRRGVLAAQLGDRVGDHLHDID
                     IVGSGAARDVSQLLQRHIGEVEFIVVRIALRICFLFIGRRTPAKGHIASLGAVREHRD
                     LAEASQLNRAAVLLLQQFAHALLRRRIVLLQDEIGDRADNTVTREVPCPGRRRNHCPD
                     DETGRSNRAPHARAPYRQG"
     gene            complement(2860..>3192)
                     /locus_tag="VIQ50_11765"
     CDS             complement(2860..>3192)
                     /locus_tag="VIQ50_11765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361103.1"
                     /translation="RGAGIGAFRGPVGGGFRTAAVGGFRGPVGGFRGPAVAGGFRRSA
                     VAPGAFGGRAFRAFAFQGRPFRRRALFPVAAGVGFGLGWDYGYPYSYGYGDPCVVWTG
                     YGWINICY"
BASE COUNT          602 a         1003 c         1043 g          544 t
ORIGIN      
        1 aagccggtgc gccggccgga tcgctacgag gactcgttta ttttcgaacg aaagccgtat
       61 acgtggccag gcaacaagac gcttgcgatc tggatcgccc ccaatgtgga ggtttggaac
      121 tatgattccc ccgtgggggt cggtgtttct ccgaacagcg gcaacatcgt gccggacgtc
      181 atcaactacg gctggagaga gtacggcctg agagtcggcc tttggcgttt cgccgacgtg
      241 ttcgacgcgg ccggcgtcaa ggcgactgtg gccttgaatt cattggtctg cgagcattac
      301 cccaaagccg tggacgaaat gaaaaagcgt ggctgggagt tcatgggcca cggaacgacc
      361 aacagcgaaa gcctggccgg tttaaatccg gaacgagagc gcgaggtcat ccgcagcgtt
      421 ctcaacacga tcgagcaagc gaccgggcga aagccgcgcg gctggctggg gagcggactc
      481 gtcgagactt acaacacgct cgacatcctc gcagaagagg gcgtgatcta ttgcggcgat
      541 tggaacaccg acgatcagcc gtaccccatg aaggtcaaga cgggaaaact cttttccatt
      601 ccgtattgca tggagatcaa cgatatcccg ctcttcattc gcaaaggcta taccggcgag
      661 caatattacc gttccgtgat cgaccagttc gagacgctgc tggccgacag caagaagcag
      721 ccgagagtca tgggcattcc gctccatccc atgatcaccg gccagccgtt gcgcatcaaa
      781 tatctgcaac gggcgatcgc cgagatgcag aagaacgatg ccgtttggtt tgccaccggc
      841 ggcgagatca tcgacgccta tcagcgcgct caccccaccg gctagcgggc cggcggcgcc
      901 gcgccgtcac ggctcgaaga tcgccttgaa cagcgccgcg aggcgaaagc ccgccatggc
      961 gagctggcgg cgcgcctgcg ctttggccca gtcttcgtat gacggatcga gcgtggtctc
     1021 ccaggtgcac ccgccggtga acgagaaggg cgagggcttt gagcctttgc ggatcgtcag
     1081 gcgctgatgc gcctcgaccg cgagcggcat gatctcgctc gcccattgcg ctgcccacgt
     1141 atccgccgag ccggtggttt cccagccggg gggcggcgtg gcggcaagga gtttggcaaa
     1201 gtcctcctcc gagtgcgcgc tgccagcggc ttgcattgcg cggaggacgg caacgctgtc
     1261 ccagtagagg tgcaggtttg ctgccggcgg cttgcatcgc ccgaacgacg gtggtgctgt
     1321 cccaataaag gtgcaggttc gggaccggcg ggacggcggg aggcggagcg accaggaaga
     1381 tcaggttgcc gcccatcgtc attgcgacgc tgtcgccaat tccgaatgac ggcggtgtgc
     1441 cgatgatgtt cggatcgacg ctggtctcgc acgtcttgtc gaaatatttc gctcccacgt
     1501 gcagcggctg atggatgtcg ccgacgaggt gcgtgagcag ccaaagcgct tcggggtcgg
     1561 tgaggttcac atcgggcttc gccggggggt tcttgccgcg caattgggcg accgcgtagg
     1621 tgatcatttg cacgacatcg atatcgtcgg ttccggcgct gcccgtgacg taagtcagct
     1681 gctgcagcgg cacatcggtg aagtggaatt tatcgtggtg cggattgcgc tccgcatatg
     1741 ctttctcttc atcggaagga ggacgcccgc aaaagggcac attgcctctc ttggcgcagt
     1801 ccgggaacac cgcgacctgg ctgaggcttc gcagctcaat cgtgccgccg ttctgcttct
     1861 ccagcagttc gcgcacgcgc tgctgcgccg tcggatagtg ctgctgcagg atgagatcgg
     1921 cgatcgcgcc gacaatacgg tgaccaggga agtcccatgc ccaggccggc gccgcaatca
     1981 ttgtcccgac gacgaaacag gccgctccaa tcgtgctccg catgcacgcg ctccctaccg
     2041 tcaggggtaa gtttacccct gttggagaca cccgtgtcag cgggaacggt tgaggtccga
     2101 ccggcaaatg cctgcgcgcc ggcagcgcgc ttggtcaggg tccgggatcg gggatggatg
     2161 acgcgacgcg gggcatcaga tgcgcggcat cagaggcacg tgcaaaatga tcccgtggag
     2221 gtgccggtgt tgtgcgctgc accgtccgga aggcgatcct tgcgcgaaag gatggtgggg
     2281 gcgacaagcc cagccggccc cccgcggctg ccgtcagaag gcgaatgcgt tcaggaccag
     2341 ggtgcacgta aacagcgcac ccaaaatcaa tccaaataac tgggtaatac gacgctcact
     2401 catctcagcc tcccgttcca agcgttagtc gcgcgaacga tcttttcggt tcaaaaatcg
     2461 ttccgccgca cgggcaagcg acgcagccag tccgttcaag ggaggtgccc ccgtgaaagc
     2521 cctcgcgatc acgctcgccg tcggcgccgc gctttgggcc ggctccgtac cgctgcagcc
     2581 caagctcgcg gctgcagcga gcgacctcgc gcctcgggca aaagcgcgcg ctggggtctg
     2641 ccgtcggcat cgctgctggt ggcggtccga tgacttatcg cccgcgggcc tactacggct
     2701 ctggaccggc ttgtccagct atggcccggc tggctcggtt atggacctgc ctggtacgcg
     2761 gacggctacg gcgcaggcct ctacggccgg tagtggtgag cgctccagct cgcggcggaa
     2821 caggaagccc ccattccgcc gcggccggct cagatccgct cagtagcaga tgttgatcca
     2881 gccatatccc gtccaaacga cgcaggggtc gccgtagcca tagctgtagg ggtaaccgta
     2941 gtcccagccc aagccgaatc cgacacccgc cgcgaccgga aacaacgccc ggcgccggaa
     3001 gggtcgacct tgaaacgcga acgcgcggaa ggctcggccg ccaaaggcgc ccggggccac
     3061 cgcggatcgg cggaatccac cggcgaccgc aggtccgcga aagccgccga ccgggccgcg
     3121 aaagccgccg accgcggccg tgcgaaaccc gccaccgacc gggccgcgaa aggcgccgat
     3181 cccggccccg cg
//
LOCUS       DATCWM010000600         4179 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_252831, whole genome shotgun sequence.
ACCESSION   DATCWM010000600 DATCWM010000000
VERSION     DATCWM010000600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4179)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4179
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_252831"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..613)
                     /locus_tag="VIQ50_11770"
     CDS             complement(<1..613)
                     /locus_tag="VIQ50_11770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008836977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9361104.1"
                     /translation="MIGSAFGVLFDGFAYGMLLFVLSVGLSVTLGMMNFINLAHCSFA
                     MLGGFVTVSLTNGLGWPFLASLPVAFASAALVSVAFERVLYRRLYGASELDQCLLTIG
                     IVFVSVAVAAYIFGTIQQPLNLPAYLRGSVSIFGHSFGVYRLFLIGVSIVITAVLVAA
                     LEYTRFGAQVRAAVDNQRMARGLGIDVDRVFAVTFALGSGLAGL"
     gene            complement(832..2007)
                     /locus_tag="VIQ50_11775"
     CDS             complement(832..2007)
                     /locus_tag="VIQ50_11775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9361105.1"
                     /translation="MKRIRVGLGCAVALLVGAASAHAQGTVKIGLINVLSGQFADAGI
                     QLDNGVKTYMKQHGDTVAGKKIEIIRRDVGGPAPDVAKRFAQELVVRDGVDILAGFLL
                     TPNALAAADVSAQAKKFMVVMNAATSIIITKSPYMIRTSVTLPQVMDTFGTWAVKNGL
                     KKCYTMVTDYGPGHDSEAAFQRAFKEAGGEIVGSVRFPVANPDFSAFVQRAKDINPEC
                     IFVFIPGGAQPAALGKAFAERGVDFTKTKVLGSGETTAEQALKAMGDAGLGLLSAWHY
                     DYKSNTPLNVEFVKVFNEMHGRNPDFFSIGGYDGMHVIYEALKKTNGNTDGEALITAA
                     KGLKWDSPRGPMSIDPDTRDVVQTIYIRRVEKVGGELVNVPFDKIENVKDPTRARGG"
     gene            2366..>4179
                     /locus_tag="VIQ50_11780"
     CDS             2366..>4179
                     /locus_tag="VIQ50_11780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361106.1"
                     /translation="MRPIFLLVFLLLVAGCGGKSARAEPTAAAAPRIEWEVKSRFRLF
                     RSEADFQRHVEAMRGDGVLAAERRLAKDSDGRGWARDLVERLCVDRAGRLLKSCERDG
                     ERESYLAPRDHRVGVTLGGTLPANDGCVWSFDDGDGHPRQVNAACDEEVKARLISSRP
                     TVASVDIVLTDGTAQRLVSEIVVRDLLIAGMGDSIAAGEGNPDRAVDLSDEGFCFKRF
                     GGGDEYFRPGRAGFRGNKSCTSMVDDSRAGNWAQQSARWLSGPCHRSLYSYQMRTAIA
                     LAIENTHVAVTFLPLGCTGATINAGFLGNQGARECPSPGTLAACSGTVRAQIAVLTEL
                     LAASRRQQADRSLDLVLLTIGANDILFSGLVANLMIEPGTERSLLSRGGIIASVDEAQ
                     TILERELPGNFAKARAALKPLVGGNLSRVVYVSYGNPGLAGPDTPCPGGRDGFDVHPA
                     FAVDGERLREAVDFVSHRFLPTVKALARCEDGKACRNPSTDRMTFVDDHQAAFAAHGA
                     CARADDDPTFDRECFARKGETFENSLTKGATDPMACGYPASEFRPYASRARWIRTAND
                     SYFTAMTYPEGLPAVLQPSDIHDATWGIFAAVYGGAVHP"
BASE COUNT          730 a         1388 c         1345 g          716 t
ORIGIN      
        1 cgagaccggc gagcccgcta ccgagcgcaa aggtcacggc gaacacccga tcgacatcga
       61 tcccgagccc ccgcgccata cgctggttgt cgaccgcggc gcgtacctgc gcgccgaagc
      121 gcgtgtattc gagcgcggca accagcacgg ccgtgatcac gatcgaaacg ccgatcagga
      181 acagccggta gacgccgaag ctgtggccga agatcgagac cgagccgcgc agatacgccg
      241 gcagattgag cggctgctgg atcgtgccga agatgtaagc tgcaaccgcg accgagacga
      301 agacgatgcc gatcgtcagc aggcactggt cgagctcgct cgcaccataa agccggcggt
      361 aaagcactct ttcgaacgct acgctgacca aggccgccga cgcgaacgcc acaggcaggc
      421 tcgccaagaa cggccagccg agcccgttgg tcaagctcac cgtgacgaaa ccgccgagca
      481 tggcgaagct gcagtgcgcc aggttgatga aattcatcat tcccagcgtc acagagaggc
      541 ccaccgacaa gacgaacagc agcatgccgt aggcaaagcc gtcgaacaga acgccgaagg
      601 ccgagccaat catgccgcaa acgcaaccgg cgtctttcgc atcgtcgtgc tcggtgtccc
      661 ggtcaaattc actccgtcat gcccgcgcat agcgcgtcgg aagacgcgtg tgaacgcgct
      721 catgtcgcgg ggacatccac gtcttatttg cgttgacacg ggagagaaaa gacgtggatg
      781 gccgggacaa gcccggccat gacgccttgt tcgacatgaa cggaacatcg actagccgcc
      841 gcgggcgcgg gtcggatctt tcacgttctc gatcttatcg aaggggacgt tgacgagctc
      901 gccgccgacc ttctcgaccc gccggatgta gatggtctgc accacgtcgc gcgtatcggg
      961 gtcgatcgac atcgggccgc gcgggctgtc ccacttgagg cccttggcgg ccgtaatcaa
     1021 agcctcgcca tcggtgttgc cgttcgtttt cttcagcgcc tcgtagatca cgtgcatgcc
     1081 gtcgtagccg ccgatcgaga agaagtccgg attgcgtccg tgcatctcgt tgaacacctt
     1141 cacgaactcg acgttgaggg gagtgttgct cttgtaatcg tagtgccacg ccgagagcag
     1201 tccgagcccg gcgtcgccca tcgccttgag cgcctgctcc gccgtggtct cgcccgatcc
     1261 caggaccttg gtcttggtaa aatcgactcc ccgctcggcg aatgccttgc ccagcgcggc
     1321 cggctgcgcg cccccgggaa tgaagacgaa gatgcactcg ggattgatgt ccttggcgcg
     1381 ctgcacgaac gccgagaaat cgggattggc cacgggaaag cgcaccgagc cgacaatctc
     1441 tccgcccgcc tccttgaagg cgcgttggaa tgccgcctcg gaatcgtgcc ccgggccgta
     1501 atcggtcacc atcgtgtaac atttcttgag cccgttcttg accgcccagg ttccgaacgt
     1561 gtccatcact tgcggcagcg tcaccgaggt gcggatcatg tacggcgact tggtgatgat
     1621 gatcgaggtg gcggcgttca tgaccaccat gaacttcttc gcctgcgccg agacgtcggc
     1681 ggcggcgagc gcattggggg tcagcaggaa tccggccagg atatcgacgc cgtcgcgcac
     1741 gaccagctcc tgcgcgaagc gcttggcgac gtcgggcgcc gggccgccga catcgcggcg
     1801 gatgatctcg atctttttgc cggcgacggt gtcgccgtgc tgcttcatat aggtcttgac
     1861 gccgttgtcg agctggatgc ccgcatcggc aaactggccg gagagaacat tgatcagccc
     1921 gatcttgacc gtgccctgtg cgtgcgcgga tgcggcgccg acgagtagcg cgacggcgca
     1981 gccaagtccc acgcgtattc gcttcattgc catcctcccg gtttgctcgg ctcgtttgac
     2041 aaaaattcta ctcatgaaaa tttgcccggt cgagaaagtt cggccctcga ggggtgggcg
     2101 cggccccacc gcgcagcagc cgccgttcgg cgcttgcggc tgcgcgttcg agtatctgcg
     2161 cccctgcggc ggacatgcgc gggccgcgcg aggtcgtccg cgtccttttc ttttcacccc
     2221 aagacgcgga cggcgccgcc cgtggccaac ggtcaaaacc actgacccga tacgggctta
     2281 gccgcgaagg tcggttccag cgggcctcac atttccgccg catcccccat gctaatcctt
     2341 ggcacggtcg attgcggcag acgccatgcg cccgattttt ctcctcgtct tcctcctcct
     2401 cgtcgcaggc tgcggcggca aatccgcgcg ggccgaaccg acggccgcgg ccgcgccgcg
     2461 catcgagtgg gaagtcaaga gccgctttcg cctgttccgc agcgaggccg acttccagcg
     2521 ccacgtcgag gcgatgcgcg gcgatggcgt gctcgcggcc gagcggcgcc tggccaagga
     2581 cagcgacggc cgcggctggg cgcgcgatct cgtcgagcgg ctgtgcgtcg atcgcgcggg
     2641 ccggctcctg aaatcgtgcg aacgcgacgg cgagcgcgaa agctatttgg cgccgcgcga
     2701 ccaccgcgtc ggggtcacgc tcggcggaac cttgccggcc aatgacggct gcgtgtggag
     2761 cttcgacgac ggcgacggtc acccgcggca agtcaatgcc gcctgcgacg aggaggtcaa
     2821 ggctcgcctc atcagcagcc ggccgacggt cgccagcgtc gacatcgttc tgacggacgg
     2881 caccgcgcag cggctggtca gcgagatcgt ggtgcgcgat ctgctcatcg ccgggatggg
     2941 agattcgatc gccgccggcg agggcaaccc cgaccgcgcc gtggacttgt cggatgaggg
     3001 cttttgcttc aagcgcttcg ggggcggtga cgaatatttc cggccggggc gagcaggatt
     3061 caggggcaac aaatcctgca cttcgatggt ggacgacagc cgtgcgggca attgggcgca
     3121 gcagagcgcg cgttggctca gcggtccttg ccatcgctcg ctctacagct atcagatgcg
     3181 caccgcgatc gcgctggcga tcgagaatac gcatgtcgcc gtgacgtttc ttccactcgg
     3241 ttgcaccggc gccaccatca acgcgggatt cctcggcaac caaggggcgc gcgagtgtcc
     3301 gagcccgggc acgctcgcgg cttgctcggg aacggttcgc gcccagatcg ccgtattgac
     3361 cgagctcttg gcggcgtcgc gccgccagca ggccgaccgc agtctcgatc tcgtgctgct
     3421 caccatcggc gccaacgaca tccttttctc cgggctggtc gccaatttga tgatcgagcc
     3481 gggcacggaa cgcagcctgc tcagtcgcgg cggcatcatc gcttcagtcg acgaggcgca
     3541 gaccattctc gagcgcgagc tgccggggaa tttcgccaag gcgcgcgcgg cgctcaagcc
     3601 gctcgtgggc ggaaatctgt cgcgcgtggt ctacgtgagc tacggcaatc ccgggcttgc
     3661 cggacccgac acgccctgcc ccggcggacg cgacggcttc gacgtgcatc cggcgttcgc
     3721 ggtcgatggc gagcggctgc gcgaagcggt ggatttcgtc tcgcaccgct ttctgcccac
     3781 cgtcaaggcg ctcgcgcgct gcgaggacgg caaggcttgt cgcaatccct cgaccgaccg
     3841 catgaccttc gtcgacgatc accaggcggc gtttgccgcg catggggcct gcgcacgcgc
     3901 cgacgacgat cccaccttcg accgggaatg cttcgcgcgc aaaggcgaga ccttcgagaa
     3961 cagcctgacg aaaggcgcga ccgacccgat ggcctgcggt tatccggcga gcgagtttcg
     4021 cccctatgcc tcgcgcgcgc gttggatccg cacggcaaac gacagctatt tcaccgccat
     4081 gacctatccc gaggggctgc ccgccgtgct gcagccaagc gacatccatg atgccacctg
     4141 gggaatattc gcggcggtct atggcggcgc ggttcatcc
//
LOCUS       DATCWM010000601         3030 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_101718, whole genome shotgun sequence.
ACCESSION   DATCWM010000601 DATCWM010000000
VERSION     DATCWM010000601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3030
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101718"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            573..1901
                     /locus_tag="VIQ50_11785"
     CDS             573..1901
                     /locus_tag="VIQ50_11785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HEY9361107.1"
                     /translation="MTEAAKPVRERSFVERYFGLHESGTDVRTEFLAGITTFLTMVYI
                     VFVNPQILGNAGMDKGAVFVATCIAAAASTLVMAFYANYPIALAPGMGLNAFFAFTVV
                     LEHKYSWQQALAAVFCSGVIFFLISVFNIREYIINSIPKNLKMAISAGVGLFLGIIAL
                     EEAKIVVANPATLVTLGDLKQWPALLCLAGFVVIVALNYRNIVGATLIGILAAALVGV
                     PLGLAEFKGIVSAPPSLAPTFLQLDFSRAGELTFIIIVFSFLMVDVFDNAGTLIGVAH
                     RAGLLDAEGNLPRMKQALLSDSFAAMFGALIGTSTTTSYIESAAGVSAGGRTGLTAVF
                     VALFFLLALFFSPLAGMIPAYASAAALLYVACVMTRGLAEIEWEDITEYAPAVVAAIT
                     MPLTYSIATGIGLGFITYALAKLIAGKFGEAKPAVVILALIFAIKFALPG"
     gene            complement(1926..2351)
                     /locus_tag="VIQ50_11790"
     CDS             complement(1926..2351)
                     /locus_tag="VIQ50_11790"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEY9361108.1"
                     /translation="MTKTVEHVHWPDAPDMWMPYAPAIKVRGGTTVYLAGVTAAPVYH
                     HHPHRPEEFDAMPRDMEGQARAALENLKRGLEAVGATFADVVTADRFVTDLSDQDALN
                     RVWAEYFRDTKPATTTVQIVRLATDPRCLVEINAVAVID"
     gene            complement(2386..>3030)
                     /locus_tag="VIQ50_11795"
     CDS             complement(2386..>3030)
                     /locus_tag="VIQ50_11795"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEY9361109.1"
                     /translation="PLALARSSSDGVAPPEAAVMAAREAAKSAATLEQLRAMLERFEG
                     CALRTTATQLVFADGNPQARVMFVGEAPGRDEDIEGLPFVGRSGKLLDRMMAGIGLDR
                     RSAYIANVVPWRPPGNRTPTPQESAVCLPFTLRQIELADPDILVCLGSPSTQTLLNSK
                     DGILKTRGRWLPFHTGTREIRAIATLHPAYLLRQPLQKRFAWRDFLAIKKALAT"
BASE COUNT          492 a          950 c          974 g          614 t
ORIGIN      
        1 aagccgtagc tggcaccgga ccgtcggcga gccttcagta tacgatccag ttctgcggtc
       61 ggaagatcgg ctcctttgcg gacagcggcg ctgctagtgc gctgtcatga tctgaagggc
      121 ctgctccggt cgtgatcgcc aggacggtca ccgccaacgc gagagccatc ccgacgagga
      181 atgcgagcct gtctggtttt ggtgccatgt ttgcctcctg gcgccagatc gatgtcgcta
      241 ggccacactc tagaaggcga gcagaaagtg atgtgtgagc cccctcacat tcgcgaaata
      301 agaaaagttt gccgtaggga gccgatggag attgctatcg cccgcctcgc cccggccgca
      361 gccaagggga ccagaacggt ccggctcgcc ggcaggcctc gggctgcgag acggcaacgc
      421 aacccctcgc cggtggacaa atcgccgggg cggcaggctt tggctgggtt tgccgcggcc
      481 tcgccgctac tgtggggcgg ctgcgagcct gaatttgccg gcagctgcgt gcggatcaca
      541 ttgcggcgtg ctcaattggc gggggagatt ccatgacgga ggcggcaaag cctgtacgcg
      601 aacgctcgtt tgtcgagcgc tatttcggcc tgcacgagag tgggaccgat gtccgcacgg
      661 aatttctcgc cggcattacg acctttctca ccatggtcta tatcgtgttc gtcaatccgc
      721 aaatcctcgg caatgcgggc atggacaagg gcgcggtgtt cgtcgcgacc tgcatcgcgg
      781 ccgcagcctc gacgctagtg atggcgttct acgctaatta tcccatcgcg ctggcgccgg
      841 gcatggggct aaatgcgttc ttcgcgttca cggtagtgct ggagcacaaa tacagttggc
      901 agcaggcgct tgccgccgtg ttctgttccg gcgtgatctt ctttctcatt tcggttttca
      961 acatccgcga atacatcatc aactcgattc cgaaaaatct aaaaatggca atttccgccg
     1021 gcgtcgggct cttcctcggc atcatcgcgc tggaggaggc caagatcgtg gtggcaaatc
     1081 cggcgacgct ggtcacgctc ggcgatctca agcagtggcc ggcgctgctc tgcttggccg
     1141 gcttcgtcgt gatcgttgcg ctcaattacc gcaacatcgt tggcgccacg ctgataggca
     1201 tcctcgctgc ggcgctcgtc ggcgtgccgc tcggccttgc cgagttcaag ggcatcgtat
     1261 cggcgccgcc ttcgcttgca ccgacgtttc tgcaactcga tttctcccgc gccggcgagc
     1321 tgacgttcat catcatcgtg ttcagttttc tcatggtcga cgtgtttgac aatgccggca
     1381 cgctgatcgg ggtcgcccat cgcgccggcc tcctcgatgc cgagggcaat ctgccgcgca
     1441 tgaagcaggc cttgctctcg gacagcttcg ccgcgatgtt cggcgctttg atcggcacat
     1501 ccaccaccac gagctatatc gagagcgccg ccggggtatc ggccggtggc cgcaccggtc
     1561 tgaccgccgt ctttgtcgcg ctgttctttc tgctcgcgct ttttttctcg ccgctcgccg
     1621 gcatgattcc cgcctacgcc tcggcggcgg cgctgcttta tgtggcctgc gtgatgacgc
     1681 gtggcctggc cgaaatcgag tgggaggaca tcacggaata tgcgccggca gtggtggctg
     1741 cgatcaccat gccgctcacc tactcgattg ccaccggcat cgggctcggc ttcatcactt
     1801 atgcactggc caagctcatc gccggcaaat tcggcgaggc gaagccggcg gtggtgatcc
     1861 tggccctgat cttcgccata aaatttgcat tgcccggatg agcgcgagcg gtggccgcgg
     1921 ggcgatcagt cgatcaccgc cactgcgttg atttcgacca ggcaacgcgg atccgtggcg
     1981 agccgcacga tctgcacggt ggttgtggcg ggcttggtgt cgcggaaata ttccgcccag
     2041 acgcggttga gcgcgtcctg atccgagaga tcggtgacga agcggtcggc ggtgacgaca
     2101 tctgcgaacg ttgcccccac cgcctcgagg ccgcgcttta gattctcgag cgcggcgcgg
     2161 gcctggccct ccatatcgcg tggcatcgca tcgaattcct caggccggtg cgggtggtgg
     2221 tggtagaccg gcgccgcggt gaccccggcg agatagaccg tcgtgccgcc cctgaccttg
     2281 atcgcgggcg cgtaaggcat ccacatatcg ggtgcgtccg gccagtgcac gtgctcgact
     2341 gtttttgtca tgcggcgcct ctcgtcgctc gttgcggatc aaccgctatg tcgccaacgc
     2401 ctttttaatc gcgagaaaat cccgccaagc aaagcgcttc tgcagcggct ggcgcaacag
     2461 ataagcggga tgcagcgtgg caatcgcgcg gatctcgcgt gtgccagtgt ggaacggcaa
     2521 ccaacgtccg cgggtcttga ggataccgtc cttgctgttg agcagcgtct gtgttgaagg
     2581 actgccgagg cataccaaga tgtcggggtc ggcgagttcg atctggcgca gggtgaaggg
     2641 aagacaaacc gcggattcct gcggtgtcgg cgtgcggttg ccgggcggac gccaaggcac
     2701 gacgttggcg atataggccg atctgcggtc gagtccgatc cccgccatca tgcggtcgag
     2761 cagcttgccc gagcggccga cgaagggcag gccctcgatg tcctcgtcgc gtcccggcgc
     2821 ctcgccgacg aacatcacgc gcgcctgcgg attgccgtcg gcgaagacaa gctgggttgc
     2881 cgtcgtccgc aacgcgcatc cttcgaagcg ctcgagcatc gcgcgcaact gctcgagcgt
     2941 agcggcgctt ttcgccgcct cgcgcgccgc catcacggcg gcctccggcg gtgccacgcc
     3001 gtcggaactg ctgcgcgcga gcgccagcgg
//
LOCUS       DATCWM010000602         2452 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_198865, whole genome shotgun sequence.
ACCESSION   DATCWM010000602 DATCWM010000000
VERSION     DATCWM010000602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2452
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198865"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1271)
                     /locus_tag="VIQ50_11800"
     CDS             complement(<1..1271)
                     /locus_tag="VIQ50_11800"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY9361110.1"
                     /translation="MNPPDRTLFVGRSLPRREDHRLLTGRGQFIADLDLPHMLHAVFV
                     RSPLAHARIRAVDLSRAAAAPGVACALSGADLLQLLPPVPDTQLALPSKWTAIVQHKF
                     INPQQPLLAHDKVRHVGEAVAVIVAESRHAAEDAAQLVSLDLDPLPAIVDPEEALRPQ
                     APIVHERFSTNLIGAFTIGKGDIEAALARSPHKLQRRFYHHRYAAAPMECRGVVGAHD
                     PRTDMVTIWSATQVVHWVRREAAAVLRLPEARVRCVALDVGGGFGLKGHVYPEDLLIP
                     FLARRLGRAVQWIEDRREHLMCSCHSRDQIHDVEVGFDDEGRILALRDRFIVDCGAWN
                     PIGAGVVYNTAVHLTGPYKIDALAIDARIAATNKVPNAPYRGAGRPEAAFAMERIVDL
                     VAGELGLEPADVRLRNMVQAEEMPYRVGIPYR"
     gene            complement(1402..>2452)
                     /gene="ligA"
                     /locus_tag="VIQ50_11805"
     CDS             complement(1402..>2452)
                     /gene="ligA"
                     /locus_tag="VIQ50_11805"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018640928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HEY9361111.1"
                     /translation="KLEPVTVGGVVVQNASLHNADEIERLGVRKNDTVTIQRAGDVIP
                     QVLGVIMEKRPKSAKPYKFPTDCPCPLHTPVVRDTTASGEEGVIARCTGEFACPYQKV
                     EHLKHFVSRRAFDIEGLGEKQIMLFFEQRWVTEPADIFTLESRNSRIKLQEQDGFGEV
                     SVRNLFDAIRARREIALERFIYALGMRHVGETTARALARGYGSWPAFHEACRRIAASD
                     AETRAEMDNLDQIGETVIDSIAAYFGEKHNRDIVERLTAQVKILDAEKPTSDSAVAGK
                     TVVFTGSLEKMTRDEAKAMAERLGAKVAGSVSQKTDFVVAGPGAGSKLGKAKDLGVAV
                     LSEDEWFDLVRQGAS"
BASE COUNT          443 a          786 c          790 g          433 t
ORIGIN      
        1 cgatagggaa tgcccacccg gtacggcatt tcctcggcct ggaccatgtt ccgcaagcgc
       61 acgtcggccg gctcgagacc gagctcgcct gcgacgagat cgacaatccg ctccatcgca
      121 aaggcggctt ccgggcggcc ggcgccccga tacggggcgt tcggaacctt gttggtcgcg
      181 gcaattctgg catcgatcgc gagggcgtcg atcttgtagg ggccggtcag atgcacggcg
      241 gtgttgtaaa ccacgccggc gcctatggga ttccacgccc cgcaatcgac gatgaaacgg
      301 tcgcgaagcg ccaggatgcg accttcatcg tcaaagccaa cctcgacatc gtggatctgg
      361 tcgcgtgaat gacaggagca catcagatgc tcgcggcggt cttcgatcca ttgcaccgcc
      421 cgtcccagcc tgcgcgcgag gaaggggatc aacaagtctt ccggataaac atggcccttc
      481 agcccgaagc ccccgccgac gtcgagagcg acgcagcgca cccgcgcctc gggaaggcgc
      541 aacaccgcag ccgcctcgcg gcgcacccag tgcacgacct gggtcgccga ccagatcgtc
      601 accatatccg tgcgcgggtc gtgggcgccg accacgccgc ggcattccat gggcgccgcc
      661 gcgtagcgat gatgataaaa gcggcgctgc agcttgtgcg gagagcgcgc gagcgcggct
      721 tcgatatcac ccttgccgat cgtgaacgcg ccgatcaggt tggtgctgaa tctttcgtgg
      781 acgatcggcg cttgcggacg cagcgcctct tccggatcga cgatagcggg aagagggtcg
      841 agatcgagac tgaccaattg cgccgcatct tcggctgcgt ggcggctctc ggccacgatc
      901 acggcgacgg cttcgccgac gtgccggacc ttgtcgtgtg ccagaagcgg ttgttgggga
      961 ttgatgaact tatgctggac gatcgcggtc catttgctgg gaagcgcgag ctgggtgtcc
     1021 ggcacgggcg gcaggagctg caggaggtcg gctccgctca gcgcacaggc aacaccgggc
     1081 gcggccgcgg cgcgcgacag atccacggcg cgaatgcggg catgggcgag cgggctgcgg
     1141 acgaagaccg cgtgcagcat gtgcggcaga tcgagatcgg cgatgaactg tccgcggccg
     1201 gtgagcaggc ggtgatcctc gcgacgcggc agcgagcggc cgacaaacaa ggttctgtcg
     1261 ggagggttca tttgcgaaag actgttccga tcggtcccgg tcgcagcgtc gccatattta
     1321 cgcagaccgc gcaagcttga gcgcgttgcg gcgagcgcga aatcacgcgc cgagcgaggg
     1381 agcacgccac cagcgaggac actaggatgc accctggcgc acgagatcga accattcgtc
     1441 ttcggagagc accgccacgc cgagatcctt ggctttgccg agcttcgagc cggcgccggg
     1501 acccgcgacc acgaagtcgg tcttttgcga caccgagccc gcaaccttgg cgccgagccg
     1561 ttccgccatc gctttcgcct cgtcgcgagt catcttttcc agcgagccgg tgaagaccac
     1621 ggtcttgccg gcgaccgcgg agtccgacgt cggcttttcc gcatcgagaa ttttgacctg
     1681 tgccgtcaat cgctcgacga tatcccgatt gtgcttttcg ccgaaatacg cggcgatgct
     1741 gtcgatcacg gtctcgccga tctgatcgag gttgtccatc tcggcccgcg tctcggcgtc
     1801 acttgccgcg attctgcggc aggcctcgtg gaacgccggc catgatccgt agccgcgcgc
     1861 gagcgcgcgc gcggtggtct cgccgacatg acgcataccg agagcgtaaa tgaaacgctc
     1921 gagcgcgatc tcgcgccgcg ccctgatcgc gtcgaacagg ttgcggaccg acacctcgcc
     1981 gaaaccgtcc tgttcctgca gcttgatccg agagttgcgc gactcgagcg tgaagatatc
     2041 ggccggctca gttacccagc gttgctcgaa gaaaagcata atctgcttct cgcccagccc
     2101 ttcgatatcg aaggcgcggc gggagacgaa atgctttaga tgctcgactt tttggtaagg
     2161 acaggcgaac tctccggtgc agcgcgcgat tacaccttct tcgccactcg cggtggtgtc
     2221 gcgcaccact ggggtatgca agggacacgg acagtcagtg ggaaatttat acggcttcgc
     2281 cgatttcggg cgcttctcca tgatgacgcc cagcacctgc gggatgacat ccccggcacg
     2341 ctggatcgtc acagtgtcgt tcttgcgcac cccaagccgc tcgatctcat cggcgttatg
     2401 cagcgacgcg ttttgcacga ccaccccgcc gacagtgacc ggctcgagct ta
//
LOCUS       DATCWM010000603         2316 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_355368, whole genome shotgun sequence.
ACCESSION   DATCWM010000603 DATCWM010000000
VERSION     DATCWM010000603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2316
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_355368"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1097
                     /locus_tag="VIQ50_11810"
     CDS             <1..1097
                     /locus_tag="VIQ50_11810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9361112.1"
                     /translation="LVLTARGLAGLVLQMPGGAIVDAARSERAVAAVAMVAISASALI
                     IALWPMFPAVFGAQILQAAGSSVVSPALAAISLGLVGHAASGERFGRNARFASIGTAL
                     AAAGMGVVGYFWSNQAVFLVTAALIVPTLITLAHIPPNEIDPVRAHGGLAQGRTGTAG
                     LRRLLTNRPLLIFAACVTFFQLANTAMLPLMASIITMRSSAWATTLVAACIVVPQIVV
                     ALFSPAVGRLAERVGRRPILLVGFAALPIRALLFLVVADPPLLVAVQVLDGVCAAVFG
                     VLVPLTIADVTRGTGRFNLAQGIVGSATGVGASLSTTLAGWMSDRLGSSAAFLGLACV
                     GAAGLILTWLLMPETAERKGSPKLLPSPRR"
     gene            complement(1156..>2316)
                     /locus_tag="VIQ50_11815"
     CDS             complement(1156..>2316)
                     /locus_tag="VIQ50_11815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006200360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEY9361113.1"
                     /translation="FVAGTIGTLGITFLAPVVVDWALRFGPADYFSLMVFAFVTVSAV
                     LGSSAVRGLATLFFGIWLGLIGVDLQTGQARFTFGLVELLDGINVIVVAVGLFAVGET
                     LYVASRYRLGKDEIIPLSGSLWMTSEEWKRSWKPWLRGAAIGFPIGAMPAGGAEIPTF
                     LSYYIERKLSAKPQEFGKGAIEGVAGPEAANNASAAGVLVPMLTLGLPTSATAAIMLS
                     AFQSYGINPGPLLLQSQTQLVWGLIASLFIGNVMLLVLNLPLIAIWVKLLQIPAPVLY
                     AGILVFATIGTYGITQSPVDLILLYLIGGAGYLMRRYDFPVAPVIIGMILGPLAEQNF
                     RQAMTISAGDWTVFFTRPLSATILALAALALFGPKLYQLAVRPKPDHVPGDA"
BASE COUNT          401 a          749 c          763 g          403 t
ORIGIN      
        1 gcctcgttct caccgcccgc gggcttgccg ggctcgtctt gcaaatgccg ggcggagcta
       61 tcgtcgatgc cgcgcggtcc gagcgagccg tcgccgcggt cgcgatggtc gccatcagcg
      121 cgagcgcgct gattatcgca ctgtggccga tgtttcccgc cgtcttcggc gcgcaaattt
      181 tgcaagccgc cggtagctcg gtggtgagtc ctgcgcttgc cgcaatcagc ctcgggctcg
      241 tcggtcatgc cgccagcggc gagcgcttcg gccgtaacgc gcgcttcgct tcgatcggca
      301 cggctctcgc ggcggcggga atgggcgtgg tcggatattt ctggtcgaat caggcggtgt
      361 ttctggtcac cgccgcgctg attgttccca cgctgatcac gctcgctcac atcccgccga
      421 acgagatcga tcccgttcgc gcccacggcg gactggccca agggcgcacc ggcacggcag
      481 gacttaggag gctgttgacc aatcggccgc tgctgatctt tgccgcatgc gtgaccttct
      541 tccagcttgc aaacacggcc atgcttccgt tgatggcgag catcatcacc atgcgctcga
      601 gcgcttgggc aacgacgctg gtcgcggcct gtatcgtggt gccgcaaatc gtggtcgccc
      661 tattttcgcc ggcggtgggg cgtttggcgg aacgagtggg acggcggccg atattactgg
      721 tcggctttgc ggctttgccc atccgcgccc tgttgtttct ggtcgtggcg gaccctcccc
      781 tgctggtggc ggtgcaggtg ctcgacggcg tgtgcgccgc agtgttcggc gtactggttc
      841 ccctcacgat tgccgatgtc acgcgcggca ccggacgatt caacttggcg caagggattg
      901 tcggcagcgc gaccggggtt ggagcttcgc tcagtaccac gctggccgga tggatgagcg
      961 atcggctcgg cagcagtgcc gcgtttctgg ggcttgcctg cgtcggcgcc gccggactga
     1021 tcctgacctg gctgctcatg cccgagaccg cggagagaaa gggcagtcca aaattgttgc
     1081 cctcgccgcg ccgctaaacg gcggccatac ttttctcgca ggcattccgc cgagcggtat
     1141 ggccgacctc acccctcatg cgtcgccggg gacgtgatcc ggtttcgggc gcaccgcgag
     1201 ttgatagagc ttgggcccga acaaagcgag cgccgccagc gcaagaatcg tggcggacag
     1261 cggccgcgta aagaacaccg tccagtcgcc ggccgatatc gtcatggcct ggcggaaatt
     1321 ttgttccgcg agcggcccga gaatcatgcc gatgatgacg ggagcgaccg ggaaatcgta
     1381 ccggcgcatc aggtagcccg cgccgccgat gagatagagc aggatgagat cgaccggaga
     1441 ctgagtgatc ccgtacgtgc cgatggtggc gaatacgaga atgccggcat agaggaccgg
     1501 cgccggaatt tgcaggagct tcacccagat cgcgatgagc ggcaggttga gcacgagcag
     1561 catgacgttg ccgatgaaca gcgaggcgat cagtccccag accagctgcg tctgcgactg
     1621 cagcagcaac ggcccgggat tgatgccgta gctctggaac gcggacagca tgattgcggc
     1681 cgtcgccgac gtgggcagac cgagcgtgag catcggcacc agcactcccg ccgccgacgc
     1741 attgttggcg gcttcgggcc cggcaacgcc ttcgatcgcg cctttgccga actcctgcgg
     1801 cttcgccgag agcttcctct cgatatagta gctcaggaac gtcggtatct cggcgccgcc
     1861 cgccggcatc gccccgatcg gaaagccgat ggccgcgccg cgcagccagg gtttccacga
     1921 tcgcttccat tcctccgagg tcatccagag cgaacccgat aacggaatga tctcgtcctt
     1981 gcccagccgg tagcgcgacg ccacgtagag cgtctccccg accgcgaaca agccgaccgc
     2041 gacgacaatg acgttgatgc cgtcgagcaa ttccacgagg ccgaaggtga aacgcgcctg
     2101 gccggtctgc aagtcgacgc cgatcaagcc cagccagatg ccgaagaaca gagtggcgag
     2161 cccccgcacc gccgaggagc cgagcacggc ggacacggtc acgaaggcga acaccatcag
     2221 cgagaaatag tcggccggcc caaacctgag cgcccagtcc accaccacgg gcgctaggaa
     2281 ggtgatgccg agggtgccga tcgtgccggc gacgaa
//
LOCUS       DATCWM010000604         4087 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_360735, whole genome shotgun sequence.
ACCESSION   DATCWM010000604 DATCWM010000000
VERSION     DATCWM010000604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4087
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_360735"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..234
                     /locus_tag="VIQ50_11820"
     CDS             <1..234
                     /locus_tag="VIQ50_11820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018458400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE thiosulfate transporter family
                     protein"
                     /protein_id="HEY9361114.1"
                     /translation="LLAAVLGGLMLGYGARLAYGCNIGAYFSGIASASVHGWLWLVAA
                     FLGSVLGTYLRPWFGLSVEGNLARAQAGPVARD"
     gene            complement(265..897)
                     /locus_tag="VIQ50_11825"
     CDS             complement(265..897)
                     /locus_tag="VIQ50_11825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361115.1"
                     /translation="MTLVCKRADRDLRIVHDTLSPSGRYGFAWGFSTGDWTDRTLEKD
                     DRDGSYYARDRSGVENYLVRVSDSEILKRLAGSHFGDRLDYNRWDYRVRWSPGSAWVV
                     EQNDTLLINAYHIERDDRVIGPFDLKTYCKDAAFKKAAAEQLGRQGEKISADEADAAL
                     LEANAVRNDGTIDVTVRFNGEDYEAKIRLAVGQKPDTLDARLISIKQSAK"
     gene            complement(1058..1480)
                     /locus_tag="VIQ50_11830"
     CDS             complement(1058..1480)
                     /locus_tag="VIQ50_11830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361116.1"
                     /translation="MKLSVAAAGLMASLIASQLSAQEAYNRVFLCDGDGVKMEIYIPE
                     SASRDFALKDGRPVLAWYALDLSDPDPKKGKSLEAVLVRYAEDKRALVLYQFSRGLPL
                     TVIPMGGGVVNFDNRFGSDAKCGPFEGPWDADQSPSER"
     gene            complement(1511..2707)
                     /locus_tag="VIQ50_11835"
     CDS             complement(1511..2707)
                     /locus_tag="VIQ50_11835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016840832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9361117.1"
                     /translation="MLRILFGSLLLSGAMAVSTAAQNAPGVTDREIKIGQTMPYTGPG
                     GWVSSLGQAEKAYMQMINDQGGINGRKINLISADDGYLLWRTGMETRKLIEVDHVAFT
                     FGSLGTTTQLAVARYLNERKIPQLFIESGAYRWGNYKETPYTIGGVRPSYRLGARLYA
                     RYILRQDQNAKICILYEDSDFGRDYAAGVRDVLGDKYAATVKEATYEFTDPSVDRQIV
                     ELKASGCNALIAAMLPPLAVQTIRKVSDLGWKPLFFMNNVSASVPVVLEPVGVENCIG
                     LLSYAYAKDPLDPTFEDDPGMKDWHAWMSKYLPGEDVRRPSFVNGYNSAATMVQVLKQ
                     AGDDLSRENIMRQATNLRDLELPMLLPGIKINTSPTDYYPVQQLQLVRFDGKRWVRFG
                     DLVYDE"
     gene            2891..3490
                     /locus_tag="VIQ50_11840"
     CDS             2891..3490
                     /locus_tag="VIQ50_11840"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEY9361118.1"
                     /translation="MHPRERLDYSPIDRRPPLRFPEGIRLVVWPLLALEEWDLSRPMA
                     RMVISPPQGQPQLPDLPNWSWHEYGMRVGFWRLKKMLERLGISPTVTLNAKVCEAYPQ
                     VIEACIDNGWELNAHSYDQVPMHKLDDQRATINKSMDIIEKFSGRRPRGWFGPGLTQT
                     FDTLDYLAEAGIEYIGDWVLDDEPVTLKTSPTISRFMTL"
     gene            3490..3744
                     /locus_tag="VIQ50_11845"
     CDS             3490..3744
                     /locus_tag="VIQ50_11845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361119.1"
                     /translation="MMALQHHPSDVMYSRALDQFRCLYDEATERAKIMAIACHPYLSG
                     VPHRIAQVRRAFEEILGHDGVVAWDGARILDWYRAQDERQ"
     gene            3746..>4087
                     /locus_tag="VIQ50_11850"
     CDS             3746..>4087
                     /locus_tag="VIQ50_11850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003550512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEY9361120.1"
                     /translation="MSTAHHFRSAFVPHDLPEPRAGAAQGPLAGLTAAVKDMYDIAEL
                     RTGGGNPDWLAAHRPALADAAAIRKLLLGGATIIGKTVCDEFFFSVTGANAHYGTPVN
                     PRAPGRLPGGSS"
BASE COUNT          752 a         1303 c         1228 g          804 t
ORIGIN      
        1 ttgctggcgg ccgtgctcgg cggattgatg ctgggctacg gcgcgcggct ggcctatgga
       61 tgcaatatcg gcgcgtattt cagcggcatc gcctccgcca gcgtgcacgg ctggctgtgg
      121 ctcgttgcgg cgttcctcgg cagcgtgctg ggcacctatc tgcgtccttg gttcggcttg
      181 agcgtcgagg gcaatctcgc ccgtgcgcag gccggaccgg tcgcccgcga ctagccagtc
      241 acgcacccca gacaccacgc gtcgtcactt cgcggattgc ttgatcgaaa tcaaccttgc
      301 gtccagggtg tcgggctttt gtccaaccgc tagcctgatt ttggcttcgt agtcttcgcc
      361 attgaagcga acagtgacgt cgatcgtgcc gtcattgcga acggcgttgg cttccaacag
      421 cgccgcgtct gcttcgtctg cggatatctt ctcgccctgc cggccgagct gctccgcggc
      481 tgctttcttg aaggcggcat ccttacagta agttttgaga tcgaatggcc ctatgacccg
      541 atcgtcccgt tcgatgtggt aggcattgat caacagcgta tcgttctgtt cgacgaccca
      601 ggcactgccg ggcgaccagc gcacacgata gtcccagcgg ttgtagtcga ggcggtcgcc
      661 gaaatggctg ccggcgagcc gcttgaggat ctcactatcg gacacgcgca cgaggtagtt
      721 ctcgactccc gaccgatctc gcgcgtagta gcttccgtca cgatcgtcct tctccaaagt
      781 gcgatcggtc caatcccccg ttgagaatcc ccaggcaaaa ccgtagcgcc ccgagggcga
      841 gagcgtgtcg tgaacaatgc gcagatcgcg gtcggcgcgc ttgcaaacca gcgtcacgcc
      901 ctcgcgaatg caaggagacg cagcccaggc cggcttggtt gcaacgtctg ccaggcacaa
      961 gcttgcaagg gacacaacca gcatttttgc aagaagaact tgcgaatgcc gagcggcaga
     1021 tcgttcggac atcttcgtgt ccctcggtgc agccgggcta gcgttcgctc ggggattgat
     1081 cagcgtccca cggtccttcg aatgggccgc atttggcatc gcttccaaaa cggttgtcga
     1141 agttcaccac gccgccgccc atcgggatta cggtcaacgg aagaccacgg ctgaattggt
     1201 agaggaccag cgcccgtttg tcctcggcgt atcgcacgag caccgcttcc aagctcttgc
     1261 cctttttcgg gtcgggatcg gacaggtcca gcgcgtacca ggcgagcacc ggccgtccat
     1321 ccttcaatgc gaaatcccgc gacgccgact ccggaatgta gatttccatc ttcacgccgt
     1381 caccgtcaca caagaacacg cggttatacg cctcttgagc cgacaattgg gacgcgatca
     1441 agctcgccat caatcctgct gccgcgaccg agagcttcat ccgatctctc cagcttggat
     1501 cgcgagccac tcactcgtcg tagaccaaat ccccgaaccg cacccagcgc ttgccgtcga
     1561 agcgcaccag ctgcaactgc tggaccggat aataatccgt cggactggtg ttgatcttga
     1621 ttcccggcag cagcatggga agctcgagat cgcgcaggtt cgtcgcctgg cgcatgatgt
     1681 tctcgcgcga gaggtcatcc ccggcctgct tgagcacctg gaccatggtg gcggctgagt
     1741 tgtagccgtt gacgaagctc ggccggcgca catcctcgcc cggcagatac ttgctcatcc
     1801 aagcgtgcca atccttcatc cccgggtcat cctcgaaggt gggatcgagc gggtccttgg
     1861 cataggcgta tgacaacaac ccgatgcagt tctcgacccc gaccggctcg aggacgacgg
     1921 gcaccgaggc cgagacattg ttcatgaaga aaagcggctt ccagccgaga tcgctgacct
     1981 tacggatcgt ctgcacggcg agcggcggca acattgccgc gatcagcgca ttgcagccgc
     2041 tggccttgag ttcgacaatc tgccggtcga ccgaggggtc cgtgaattcg taggtcgctt
     2101 ccttcacggt cgcggcgtat ttgtcgccga gcacgtcgcg cacgccggct gcatagtcgc
     2161 ggccgaagtc gctgtcctcg tagaggatgc agatttttgc gttttgatcc tgccgcagta
     2221 tgtaccgggc gtaaagacgc gctcccagcc gatagctcgg gcgcacgccg ccgatcgtat
     2281 agggtgtctc cttgtaattg ccccaacggt aagcgccgct ctcgatgaac agctggggga
     2341 tttttcgctc gttgagatat cttgcgaccg cgagctgcgt ggtcgttcca agcgacccga
     2401 acgtaaaggc gacgtggtcg acttcgatca gcttgcgcgt ctccataccg gtccgccaca
     2461 gcagatagcc gtcgtcggcg ctgatcaggt tgatcttgcg gccgttgatg ccgccctgat
     2521 cgttgatcat ttgcatgtag gccttctcgg cctgaccgag cgacgagacc cagccgcccg
     2581 ggccggtata gggcatcgtc tggccgatct tgatctcgcg atcggtcacc cccggcgcat
     2641 tctgcgcggc cgtcgacacc gccattgcgc cgctcagcag caaggagccg aataaaatcc
     2701 gcaacattgc gaacccgcct tcgttggaaa gtgcccgcga catcggcaca acataccatc
     2761 gtgccgatgc ggtgcaatcg gaagcggctg cgccccgctc cgctacgacc gaccgactcg
     2821 cgaccgcaag tccgcctcga tatgttctag caacgcgtac cccccacgca gcgccagaag
     2881 ggagaaatga atgcatccgc gcgaacgttt ggactattcg ccgatcgatc gccggccgcc
     2941 gctgcggttt ccggaaggaa ttcgcttggt ggtatggccg ctgctggcgc tcgaggaatg
     3001 ggatttgtcg cgtcccatgg cgcggatggt catctcgccg ccgcaaggcc agccgcaatt
     3061 gcccgacctg ccgaattgga gctggcacga atacggcatg cgggtcggct tctggaggct
     3121 caagaaaatg ctcgagcgcc tgggcatctc gccgaccgtc acgctcaatg caaaagtgtg
     3181 cgaggcctac ccgcaggtga tcgaggcgtg catcgataat ggatgggagc tcaacgccca
     3241 cagctacgac caggtcccca tgcacaagct cgacgaccag cgggcaacga tcaacaaatc
     3301 gatggacatc atcgagaagt tctcaggccg gcggccgcgc ggatggtttg gtcccggatt
     3361 gacgcagacg ttcgacacgc tcgattacct cgccgaagcc ggcatcgaat atatcggcga
     3421 ctgggtactc gacgacgagc cggtgacgct caagacctcc cctacaattt cgagattcat
     3481 gacattgtga tgatggcgct ccagcatcat ccctcggacg tcatgtattc gcgggcgctc
     3541 gatcaattcc gctgccttta tgacgaggcg acggagcggg cgaagatcat ggcaatcgcc
     3601 tgtcatccct acctgtcggg cgttccgcat cgcattgctc aggtgcggcg cgcgttcgag
     3661 gagattctcg gccatgacgg cgtcgtcgcg tgggacggcg ccaggattct cgattggtat
     3721 cgagcgcagg acgaaaggca atagcatgtc gacggctcac catttccgca gcgcgttcgt
     3781 cccgcacgat ttgcccgaac cccgcgccgg ggccgcgcag gggccgcttg ccggactgac
     3841 cgcggcggtg aaggacatgt atgacatcgc cgagctgcgc accggtggcg gcaaccccga
     3901 ttggcttgcc gcgcatcggc cggcgctcgc ggacgcggcg gcgatccgga agttgctgct
     3961 cggaggagcc accatcatcg gcaagaccgt gtgcgacgaa tttttcttca gcgtcaccgg
     4021 cgccaacgcg cattacggca ctccggtcaa tcctcgcgcc ccgggccgac tgccgggcgg
     4081 ctcctcg
//
LOCUS       DATCWM010000605         2006 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_517561, whole genome shotgun sequence.
ACCESSION   DATCWM010000605 DATCWM010000000
VERSION     DATCWM010000605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_517561"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            73..441
                     /locus_tag="VIQ50_11855"
     CDS             73..441
                     /locus_tag="VIQ50_11855"
                     /inference="COORDINATES: protein motif:HMM:NF014907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361121.1"
                     /translation="MGRGRRDRAGLDRAIAALDSIEAELLATGVVDAGRAFNLTWHDW
                     LNLRSLTEVSRVIALAARKRENSRGAHFRSDFPEPGDLTSSRFTVARQTAAGIDITDE
                     PVAFTHVRPGETLLDKVAAE"
     gene            455..1159
                     /locus_tag="VIQ50_11860"
     CDS             455..1159
                     /locus_tag="VIQ50_11860"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF017493.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HEY9361122.1"
                     /translation="MIPIASIQRTAEELMAKAAIEIPDDYLAGLRQCVDTEKGDLSAF
                     VIKAMLENYDAAKEDRRAMCGDTGLPRWYVKIGNEAVVEGGPVAMEAALRRATARATT
                     GVPLRPNRVHPLWRTDHNNNVGIGAPEIEYAFHPDADWIDLTTVHKGGLFGSDYRMLF
                     PGDGIDGIRRFYLDTLIGFGKRGLACQPAIVGIGLGGSKDTSMVLGKQASCLRVVGSR
                     NRRRRSIRTAATPSAR"
     gene            1156..1581
                     /locus_tag="VIQ50_11865"
     CDS             1156..1581
                     /locus_tag="VIQ50_11865"
                     /inference="COORDINATES: protein motif:HMM:NF017494.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase C-terminal domain-containing
                     protein"
                     /protein_id="HEY9361123.1"
                     /translation="MTATASFRFAQWLDGWFELSGCNVIIGKGGMTSEIYRKSFVPNG
                     AIYLTTVGYGTGALLGRGIKRVAGVYWLEELGLAQAVWVLDVEKFGPFLVESDLAGNS
                     LFERENAKIAPGLAKLYAGTKPATLRRYGETDDKTDEVI"
     gene            complement(1686..1895)
                     /locus_tag="VIQ50_11870"
     CDS             complement(1686..1895)
                     /locus_tag="VIQ50_11870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361124.1"
                     /translation="MLEGLGGKKPGGLMSYGENFAAMYWRAAYFVDRIFKGTKPADLP
                     VEQAAKISGVPGETDLLLRNSTTGG"
BASE COUNT          353 a          639 c          649 g          365 t
ORIGIN      
        1 acgcgcgctg cttccgttcg agcgcaaagg cggcgacttg aacgatctgc gcgagcggct
       61 tctcgcggtc atgtgggacg aggtcggcgc gaccgcgccg gtctcgatcg cgccattgcc
      121 gcgctcgact cgatcgaggc ggagctgctt gcgaccggcg tcgtcgatgc ggggcgcgct
      181 ttcaatctga cctggcacga ttggctcaac ctgcgctcgc tcaccgaggt cagccgggtg
      241 attgcgctcg cggcgcggaa gcgcgagaat tcgcgcggcg cgcacttccg ctccgatttt
      301 ccggagccgg gcgatctgac gagttcgcgg ttcacggtcg cgcgacagac ggccgccggc
      361 atcgacatca ccgacgagcc ggttgcgttc acccacgtgc ggccgggcga gacgctgctg
      421 gacaaggtcg ccgccgagta aaccgaggcc actcatgatt cccatcgcgt ccattcaacg
      481 caccgccgag gagttgatgg ccaaagcggc gatcgagatt cccgacgact atctcgcggg
      541 cttgcgccaa tgcgtcgaca cggaaaaggg cgatctctcc gctttcgtga tcaaggcgat
      601 gctggagaac tacgacgccg ccaaggagga ccgccgcgcg atgtgcggcg ataccggcct
      661 gccgcgctgg tacgtcaaga tcggcaacga ggcggtcgtc gagggcgggc cggtggcgat
      721 ggaggccgcc ttgcggcgcg cgactgctcg cgccacgacc ggcgtgccgc tgcgtcccaa
      781 ccgcgtgcat ccgctctggc gcaccgacca caacaacaat gtcggcatcg gcgcgcccga
      841 gatcgagtac gcgtttcatc ccgatgccga ctggatcgat ctcaccaccg tgcacaaggg
      901 tggcctgttc ggctccgatt accgcatgct gtttccgggc gacggcatcg acggcatcag
      961 gcggttctat ctcgacacgc tgatcggctt cggcaagcgc gggcttgcgt gccagccggc
     1021 gatcgtcggc atcgggctcg gcggctcgaa ggataccagc atggtgctgg gcaagcaggc
     1081 gtcctgcctg cgcgtggtcg gatcgcgcaa ccggcggcga cggtcaatcc ggacggcagc
     1141 tacaccgtcg gcgcggtgac cgccaccgcc tcgttccgct tcgcgcaatg gctcgacggc
     1201 tggttcgaac tctccggctg caacgtcatc atcggcaagg gcggcatgac gtcggagatc
     1261 tatcgcaagt cgttcgtgcc caatggcgcg atctacctca ccacggtcgg ctacggcacg
     1321 ggcgcgctgc tcgggcgcgg catcaagcgg gtcgcgggcg tctattggct cgaggaattg
     1381 gggctggcgc aggcggtctg ggtgctcgac gtggagaagt tcggcccgtt cctggtcgag
     1441 agcgacctcg ccggcaacag cctgttcgag cgcgagaacg ccaagatcgc gccgggactg
     1501 gcgaaacttt acgccggcac caaacctgcc acgctgcgcc gctacggcga gaccgacgac
     1561 aagaccgacg aagtgatctg aggcttgtct gtggctcggc acgtttcggt tggccatcca
     1621 tcgttaataa caatccgaaa caatggatcg gcgtcggcgc tcgtttcccg caaaatatga
     1681 cgggattagc cgccggtcgt gctgttgcgc aagaggagat cggtttcgcc ggggacgccg
     1741 ctgatcttcg cggcttgttc caccggtaga tcagcgggtt ttgtgccttt gaaaatcctg
     1801 tccacgaagt atgcggcgcg ccaatacata gcagcaaagt tctccccgta ggacatcaga
     1861 ccaccaggtt tcttcccccc tagaccttcc aacatctcat tgaattaagg aacgttacaa
     1921 gctcgcacgg gttttgtctc tgggacctga ggaaatcacc catgggaaaa caatcaatct
     1981 tttcggttgg cgccacggtc gtcttc
//
LOCUS       DATCWM010000606         3427 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_533744, whole genome shotgun sequence.
ACCESSION   DATCWM010000606 DATCWM010000000
VERSION     DATCWM010000606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3427)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3427)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3427
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_533744"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(235..1344)
                     /gene="pqqE"
                     /locus_tag="VIQ50_11875"
     CDS             complement(235..1344)
                     /gene="pqqE"
                     /locus_tag="VIQ50_11875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018149 - peptide cross-linking [Evidence
                     IEA];
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein
                     PqqE"
                     /protein_id="HEY9361125.1"
                     /translation="MLHKPLGLLAELTHRCPLGCPYCSNPLALDAREDELDTAAWLRV
                     FREAAELGVLQLHLSGGEPGARRDLVDLAAGAHVAGLYTNLITSAVGITEETLGTLAK
                     AGLDHVQISIQDSDAASADRIAGYRGAFAKKRALAAAVVRHNLLLTVNAVVHRANIER
                     IGDMVDAALALGASRIEIAHVQYYGWALKNRAALMPSRAQVERAAAALSDLRSRHHGH
                     IVIDAVIPDYYARYPKPCVGGWGRRSLNVTPSGKVLPCHAAETLTGLEFWNVRQHSLA
                     DIWANSPAFNAFRGTAWMKEPCASCPRRELDFGGCRCQAFALTGDAAATDPVCQLAPD
                     HARVAELAAVQTDAPYVYRRMASRHRADLDGDGMA"
     gene            complement(1402..1704)
                     /gene="pqqD"
                     /locus_tag="VIQ50_11880"
     CDS             complement(1402..1704)
                     /gene="pqqD"
                     /locus_tag="VIQ50_11880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020178243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis peptide
                     chaperone PqqD"
                     /protein_id="HEY9361126.1"
                     /translation="MEHRLSDPSALIPSEARPRLPRGVRLVHNEAQGGWILLAPERVF
                     KADAIAAEIIKRCTGEVTFAELVDELAKSYAAPRERVLADVGALLRGLADKRLLEL"
     gene            complement(1689..2420)
                     /gene="pqqC"
                     /locus_tag="VIQ50_11885"
     CDS             complement(1689..2420)
                     /gene="pqqC"
                     /locus_tag="VIQ50_11885"
                     /EC_number="1.3.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline-quinone synthase PqqC"
                     /protein_id="HEY9361127.1"
                     /translation="MTPSELEAQLRDIGARRYHRLHPFHVLLHGGKCTKGQVQAWALN
                     RYHYQATIPLKDASLIARCEDSALRREWRRRLVDHDGERSGEGGIARWLKLTDGLGLE
                     RDYVVSLAGLLPATRFAVEAYVHFVREKSLLEAVASSLTELFSPQIIGERLTGMLKGY
                     DFVSADTLAYFSARPPLAQRDSDFALDYVKRHAETPDAQQAVLKALEFKCDVLWAMLD
                     ALYHAYVAPRHVPPGAFVPQDWSTA"
     gene            complement(2426..3322)
                     /gene="pqqB"
                     /locus_tag="VIQ50_11890"
     CDS             complement(2426..3322)
                     /gene="pqqB"
                     /locus_tag="VIQ50_11890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012453680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein
                     PqqB"
                     /protein_id="HEY9361128.1"
                     /translation="MTARVLGSAAGGGFPQWNCRCPTCRLAWAGDARVRPRTQSSLAV
                     TADGESWLLINASPDLPQQIRQSRALHPRNGTRGSPIKAVLLTGAEIDQVAGLLSLRE
                     REPFRLYATAVTLATLAENAMFGVLASDVVTCKAVVPAAALTLPGGLQAQLFTVPGKV
                     PLYLESDNPETASETAANVGIELCAGETRIVYVPGAAAVTPAMLARMQGADLVFFDGT
                     LFRDDEMITTGTGAKTGRRMGHMPIDGEDGSLVALEGLTGRRVYVHINNTNPILIAGS
                     PERLHVEGKGWEIAEDGMEITL"
BASE COUNT          597 a         1108 c         1153 g          569 t
ORIGIN      
        1 cggccgctgc gccgcgatga cgggagcgca cgaaacggcg ccatattgcg gcatttcgag
       61 cgcgacgcga ttccgtatgc gttagagact gactggccgg ttggggcggc aggattcgaa
      121 cctctgcatc tcagaatcgg aattcggcca gactctcagc tcggggcggg agaagccgaa
      181 catgcgcatc tcgattggag gatgtcgtgc cgctcctcgt tcccagagaa agtctcaggc
      241 catgccatcg ccatcgagat ccgcccgatg acgcgatgcc atgcgccgat aaacgtaagg
      301 cgcgtcggtc tggaccgccg caagctctgc gacccgcgcg tggtcgggcg caagctggca
      361 taccggatcg gttgcggcgg catcgccggt gagggcgaag gcctggcaac ggcagccgcc
      421 gaaatccagc tcgcggcgcg ggcagcttgc gcatggctcc ttcatccatg cggtgccgcg
      481 gaaggcattg aaggccgggg agtttgccca gatgtcggcg agcgaatgct ggcgcacgtt
      541 ccaaaattcg aggccggtca gcgtttcggc ggcgtgacag ggcagcactt tgcccgacgg
      601 cgtcacattc agcgagcgcc ggccccagcc accgacgcac ggctttggat agcgggcgta
      661 gtagtccggg atcaccgcgt cgataacgat atggccgtga tgacgcgacc gcaggtctga
      721 cagcgccgcc gccgcccgct cgacctgcgc gcgcgacggc atcagcgcgg cgcggttctt
      781 cagcgcccag ccgtaatatt gcacgtgcgc gatctcgatg cggcttgcgc caagcgcgag
      841 cgcggcatcg accatgtcgc cgatccgctc gatgttggcc cggtgcacca ccgcgttgac
      901 cgtgagcagg aggttgtggc gcacgaccgc ggccgccagc gcccgttttt tggcaaatgc
      961 gcccctgtac ccggcaatgc ggtcggcgga cgcagcgtcg ctgtcctgga tcgagatctg
     1021 cacatggtcg aggccagctt tggccaatgt gccgagggtc tcctccgtga tgcccaccgc
     1081 cgaggtgatg agattggtgt aaagaccggc gacatgggcg ccggcggcga ggtcgacgag
     1141 atcacgccgc gcgcccggct cgccgcccga caaatgcagc tgtaggacgc cgagttcggc
     1201 cgcttcgcgg aaaacgcgca gccaggccgc ggtgtcaagc tcgtcttctc gcgcgtcgag
     1261 cgcgagcgga ttggagcaat aggggcagcc gagcggacaa cggtgagtca gctcggcgag
     1321 gagcccaaga ggcttatgca gcattgcgga accaacgcgg cctcaggacc atcgatccgg
     1381 aggcgttgcc cgtcgcttct atcacaattc caggagcctt ttgtcggcca ggccgcgcaa
     1441 cagcgccccg acatccgcca gaactctctc gcgcggcgct gcgtagctct tcgccagttc
     1501 atcgaccagc tcggcgaaag tgacttcgcc ggtgcagcgc ttgatgatct cggccgcgat
     1561 tgcgtcggcc ttgaacaccc gttccggcgc aagcagaatc cagccgccct gggcttcgtt
     1621 gtggacgagc cggaccccgc gcggcagtcg cggccgcgcc tcggagggga tcagcgcgct
     1681 tggatcgctc aggcggtgct ccaatcctgc ggcacgaagg cgccgggcgg aacatgcctc
     1741 ggtgccacat aggcatgata gagcgcatcc agcatcgccc acagcacgtc gcacttgaat
     1801 tcgagcgctt tgagcacggc ctgctgggcg tccggtgttt cggcgtggcg cttgacgtaa
     1861 tcgagcgcga agtcggagtc gcgctgggca agcggcgggc gcgcggagaa ataagcgagc
     1921 gtgtcggcgc tgacgaagtc gtaacccttg agcatgccgg tgagccgctc gccgatgatt
     1981 tgcggcgaaa acagctcggt gagcgaagag gcgacggcct cgagcaggct cttctcacgg
     2041 acgaagtgca cataggcttc gacggcaaag cgcgttgcgg ggagtaaccc ggcgagcgaa
     2101 acgacgtagt cccgctcgag ccccaatccg tcggtcagct tgagccagcg ggcaatgccg
     2161 ccctcgccgc tgcgctcgcc atcgtggtcc acgaggcgtc gccgccactc ccggcgcagc
     2221 gccgagtcct cacagcgcgc gatcaggctc gcgtccttca gcgggatcgt cgcctggtaa
     2281 tggtaacgat tgagcgccca ggcttgcact tggcccttcg tgcatttgcc gccgtgcagc
     2341 agcacatgga acgggtgcag ccgatgatag cgccgcgcgc cgatgtcgcg cagttgcgct
     2401 tcgagttcgg aaggggtcat cggcttcaca gcgtgatctc cattccgtct tcggcgattt
     2461 cccagccctt gccttccacg tgcaggcgct cgggggaacc cgcgatcagg atcggattgg
     2521 tgttgttgat gtgcacatag acgcgccgac cagtgagtcc ctcgagggcg accagagacc
     2581 catcctcgcc gtcgatcggc atgtgcccca tgcggcggcc ggtcttggcg ccggtaccgg
     2641 tcgtgatcat ttcgtcgtcg cgaaataggg tgccgtcgaa gaagaccaga tcggcgccct
     2701 gcatccgtgc cagcatcgcc ggcgtcacgg cggcagcgcc ggggacatag acgatgcgcg
     2761 tctcgccggc gcaaagctcg atgccgacat ttgctgccgt ctcgctggcg gtctccggat
     2821 tgtcgctttc gagatagagg ggcaccttgc ccggaaccgt gaacagttgc gcctgcaatc
     2881 cgccgggcag cgtgagcgct gcggcgggaa cgacggcctt gcacgtgact acgtccgacg
     2941 ccagcacgcc gaacatggcg ttctccgcga gcgtggcaag cgtgacggcc gtggcgtaaa
     3001 gccggaaggg ctcgcgctcg cgcaagctca gcaaacccgc gacttgatcg atctccgcgc
     3061 cggtgagcaa caccgctttg atcgggcttc cgcgcgtgcc attgcgcgga tgcaaggccc
     3121 gcgattgccg aatctgctgg ggaagatcgg gagaggcgtt gatcaacagc cagctttcgc
     3181 cgtcggcggt gacggcaagg cttgactggg tgcgcggccg cacgcgcgca tcacccgccc
     3241 acgccaaacg gcatgtcggg cagcgacagt tccattgcgg aaagcctccc cccgccgccg
     3301 aacccaggac gcgggcggtc aatcgcccca ttcaggatcg acgcaagtgg gcggatcaga
     3361 actcggccgg caaatacccg ttgatctcca ggccgatgca gatctcaacg agggtcgggg
     3421 ttgtcca
//
LOCUS       DATCWM010000607         5407 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_90960, whole genome shotgun sequence.
ACCESSION   DATCWM010000607 DATCWM010000000
VERSION     DATCWM010000607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5407
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90960"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..843)
                     /locus_tag="VIQ50_11895"
     CDS             complement(<1..843)
                     /locus_tag="VIQ50_11895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016149 - translation release factor
                     activity, codon specific [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HEY9361129.1"
                     /translation="MLPEQKLDALVTRHKTVERELANPVAPETYVKLSREFAELAPIV
                     GAVQNYRAIVAEIEGLDALIADAATDPEMRALALSERPELEQKRAGLERQIKLALLPK
                     DAMDERNVILEIRAGTGGDEAALFAGNLFRMYERYAANQGWKVEVISASEGTMGGFKE
                     VVAEIRGRGAFAKLKFESGVHRVQRVPDTEAQGRIHTSTATVAVLPEAGDVDIDIDEA
                     DLKIDTLRSGGAGGQHVNKTESAVRVTHIPTGIEVKMQEDRSQHRNRAKAMAVLRARL
                     YDFER"
     gene            complement(1103..3370)
                     /gene="ptsP"
                     /locus_tag="VIQ50_11900"
     CDS             complement(1103..3370)
                     /gene="ptsP"
                     /locus_tag="VIQ50_11900"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008965 - phosphoenolpyruvate-protein
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HEY9361130.1"
                     /translation="MRGALGGPRVLLRRLREVMAEPVSAQERLDKIVVLIAANMVAEV
                     CSVYVLRVDGTLELYATEGLNKAAVHQTVLRSDEGLVGLVASEANPVNLSDAQNHPAF
                     SYRVETGEEIYHSFLGVPVLRAGNTLGVLVVQNRARRTYTEEEEEALQTTAMVLAEMI
                     ASGELSAIAKPGAEPAARRPLHLVGTALNEGIALGHVVLHEPRVVITNFIADDVPKEL
                     KRLEAAVETMRSDLDVLLERGEVVDGGEHRDVLEAYRMFAYDRGWVHRLEEAVATGLT
                     AEAAVERVQSDTRARMLRATDPYLRERLHDLDELANRLMHQLLGKDYAPARDRLPENA
                     VLVARSMGPAALLEYDRKRLRGLVLEEGGPNSHVAIVARALGIAAVGEIANATGVADP
                     GDAIIVDGANGDVHMRPSPDMEAAYVERVRLRARRQLQYLALRDKPCVTRDGEKVELM
                     INAGLAVDLPHIEETGAAGIGLFRTELQFMVAATFPRTAEQFSLYRAVLDAAGDRPVI
                     FRTLDIGGDKVLPYMRNVEEENPALGWRAIRLGLDRPGLLRSQIRALLRAGGGRDLRI
                     MFPMIATVEEFDEAKSLVERELTHLRRHGHKLPERVEIGTMLEVPSLLYQLDELLERV
                     DFLSVGSNDLVQFFYAADRGNSRVAERFDAISTPVLRALKSVADKGRAHGKPVTLCGE
                     LASKPIGALALVAIGYRGFSLSPSAVGPVKAMLLELNARKAATLIEPLIESPAGSQPI
                     RERLKAFAAEQGLQI"
     gene            complement(3525..4553)
                     /locus_tag="VIQ50_11905"
     CDS             complement(3525..4553)
                     /locus_tag="VIQ50_11905"
                     /inference="COORDINATES: protein motif:HMM:NF016908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HEY9361131.1"
                     /translation="MAKPTISYAQRFEDIYLMRCFGSRSDGFYIDIGSGHPVYDNASF
                     AFYLEGWHGVTVEPNPTLAPLSRAIRPRDRHVEALLGASVGEAMFYLVEDFHGLSTMI
                     EGHARAAHQQFGKSSQAMAMPVTTLHELCRRHAPPVFEFLKVDVEGAEQEVLLNGDWQ
                     SFRPKVVVVEALAPYTLAPAWPAWEPFLAKHGYRYVWFDSLNRYYLAEEASELARCFE
                     TAPRTFEEVFQFRTVKPALADDRHPDHRLAKLLAGNDMTHLPLLGRDVLLERVTADID
                     YTALEQPAGADAIAEATERVFGPGGRLSGKGLKLPPVPKLREVYAALLDSDEFRAACG
                     RISASYAW"
     gene            complement(4611..>5407)
                     /locus_tag="VIQ50_11910"
     CDS             complement(4611..>5407)
                     /locus_tag="VIQ50_11910"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEY9361132.1"
                     /translation="GGSDTSAVAVAAAIAAERCDIYTDVDGVYTSDPRVVPRAQRLER
                     IAYEEMLELASLGAKVMQVRSVELGMVHNVRIFVRSSFEQPEDIDPHGTPPGTLICGE
                     EEIVEQEVVTGIAFSKDEAQISIRRVQDKPGIAAAIFGPLADANINVDMIVQNVSADG
                     ATTDITFTVPASDYQRATETLIKAKGYVGYERLDGANDVAKISVIGIGMRSHAGVAAK
                     AFKALAEKGINIRAITTSEIKFSLLIDANYTELAVRTLHSLYELDK"
BASE COUNT          888 a         1761 c         1787 g          971 t
ORIGIN      
        1 ccgctcgaag tcgtaaagtc gggcgcgcag caccgccatg gccttggcgc gatttcggtg
       61 ttgcgagcgg tcttcctgca tcttgacctc gatgccggtc gggatgtggg tcacgcgcac
      121 cgccgactcg gtcttgttga cgtgctggcc gccggcgccg cctgagcgca gcgtgtcgat
      181 cttgaggtcg gcttcgtcga tatcgatatc gacgtcgccg gcctcgggca gcacggcgac
      241 ggtcgcggtc gacgtatgga ttcggccttg cgcttcggtg tcgggcacgc gttggacgcg
      301 atgcacgccc gattcgaatt tgagcttggc gaaggcgccg cgcccgcgga tttccgccac
      361 aacctccttg aagcctccca tggtgccctc gctcgcggaa atcacctcga ccttccagcc
      421 ctggttcgcc gcatagcgct cgtacatgcg gaagagattg ccggcaaaga gcgcggcctc
      481 gtcgccgccg gtgccggcgc ggatctccag gatcacgttg cgctcgtcca tcgcgtcctt
      541 gggcagcaac gccagcttga tctgtcgttc gagccccgcg cgcttttgct cgagttccgg
      601 ccgctcggag agcgccagcg cgcgcatttc ggggtcggtt gcggcatccg caatgagcgc
      661 atcgagcccc tcgatctcgg cgacgatggc gcgatagttc tgcaccgccc cgacgatggg
      721 agcgagctcg gcgaattcgc gcgagagctt gacgtaggtc tcgggcgcca ccgggtttgc
      781 gagctcgcgt tcgaccgtct tgtggcgggt gacgagcgcg tcgagttttt gctcaggtag
      841 catggttttc gcaattcagg ctagtgtccc gattccgaag ttcgcatcat tgtgccgcag
      901 cctcgtttgc gaacttcgga atcgaaggac actagcaact tgttgatcta gtgtggcttt
      961 ggttcagagg tccgcatttc cgactcgctg caagaatgat gcggacttct gaaccgccac
     1021 actagcgccg gcggcacgtc gcgtatgcgg cgcaagcgct gcctgccggc gcttctagcg
     1081 tcattgagat attgcgccgg catcaaatct gcagcccctg ttcggcggca aaagccttga
     1141 gccgctcgcg gatcggctgg ctgccggccg gactttcgat caatggctcg atcagcgtcg
     1201 ccgccttgcg cgcgttgagc tcgagcagca tggccttgac cggcccgacc gcggagggcg
     1261 agagcgagaa cccgcgatag ccgatggcga ctagcgcgag cgccccgatc ggcttggagg
     1321 cgagttcgcc acacagcgtc accggcttgc cgtgcgcgcg gcccttgtcc gcgacgctct
     1381 tgagcgcgcg caagaccggc gtagagatcg catcgaaacg ctccgcgacc cgcgaattgc
     1441 cgcggtcggc ggcatagaag aactgcacga gatcgttcga gccaaccgat aggaagtcga
     1501 ctcgttcgag caactcgtcg agctggtaga gcagcgaggg cacctcgagc atcgtcccga
     1561 tctcgacccg ctcgggcagc ttgtggccgt gccggcgcaa atgggtaagc tcgcgctcga
     1621 ccagcgactt ggcctcgtcg aactcctcga cggtggcgat catcggaaac atgatgcgca
     1681 gatcgcgtcc gccgcccgcg cgcagcagcg cgcggatctg gctgcgcagc agaccgggcc
     1741 ggtcgaggcc cagccttatg gcgcgccaac cgagcgcggg gttctcctcc tccacgttgc
     1801 gcatgtaggg aagcaccttg tcgccgccga tgtcgagcgt acggaatatc accggcctgt
     1861 cgcccgcggc atcgagcacg gcgcgataga gcgagaattg ctcggcggta cgtgggaagg
     1921 tcgccgccac catgaactgc agttcggtgc ggaacagccc gatcccggcg gcgccggtct
     1981 cctcgatatg cggcaggtcg acggcgaggc cggcgttgat catcagctcg accttctcgc
     2041 cgtccctggt tacgcagggc ttgtcgcgca aagcgagata ttgcagttgc cggcgcgcgc
     2101 gcagccgcac gcgctcgaca taggcggcct ccatatcggg tgacggccgc atatgcacgt
     2161 cgccgttcgc gccgtcgacg atgatggcat cgccgggatc ggcaacgccg gtggcattcg
     2221 cgatctcgcc gaccgccgca atgccgagcg cgcgggcgac gatcgccacg tgcgagttcg
     2281 gaccgccttc ctcgagcacc agcccgcgca ggcgtttgcg gtcgtactcg agcagcgccg
     2341 ccgggcccat ggagcgggcg accagcacgg cgttttccgg caatcggtcg cgcgcaggcg
     2401 cgtaatcctt gcccagcagc tggtgcatca aacggttggc gagctcgtcg agatcgtgca
     2461 gccgctcgcg caaatacgga tcggtggcgc gcagcatgcg cgcgcgcgta tccgactgca
     2521 cgcgctcgac cgcggcctcg gcggtgaggc cggtcgcaac cgcttcttcc agacggtgca
     2581 cccagccgcg gtcgtaggcg aacatccggt aggcctcgag cacgtcgcga tgctcgccgc
     2641 cgtcgaccac ttcgccgcgc tcgagcaaga cgtcgagatc cgagcgcatg gtctcgactg
     2701 cggcttccag ccgcttgagc tctttcggca cgtcgtcggc aatgaaattg gtgatcacga
     2761 cgcgcggctc gtgcagcacc acgtgtccga gcgcgatgcc ttcgttgagg gcggtgccga
     2821 cgaggtgcag cggccgccgg gcggcgggct cggcgcccgg cttggcgatg gccgagagct
     2881 cgcccgaggc gatcatctcc gcgagcacca tcgctgtggt ttgcagcgcc tcctcttcct
     2941 cctcggtgta ggtgcgccgc gcccggttct gcaccacgag cacgcccagc gtgttgccgg
     3001 cgcgcagcac cggcaccccg aggaacgagt ggtagatctc ttcgccggtt tcgacgcgat
     3061 aggagaatgc gggatggttc tgcgcgtccg agaggttgac cggattcgcc tcgctggcga
     3121 ccaggccgac caagccttcg tcggagcgca gcaccgtctg gtgaaccgcc gctttgttca
     3181 ggccttcggt ggcgtagagc tcgagcgtgc cgtccacgcg cagcacgtag acggagcaaa
     3241 cctccgccac catgttggcg gcgatcagca ccacaatctt gtcgaggcgc tcctgcgcgc
     3301 tgaccggctc cgccatcacc tcgcgaagcc gacgcaacag cacgcgcgga ccgccgagcg
     3361 cgccacgcat ggcgtatcct cggttcagct catccggccg aggtgtcagc cctcggctcg
     3421 accaagtcag gaaatagtat ccgccgggtc cgggcgccca cagcggctac aatccatcac
     3481 gccgtatagc caatgcgggg agggccgggc aagcaaaagg cgtcttacca ggcatagctt
     3541 gcggaaatac gaccgcaggc agcgcggaat tcgtcgctgt cgaggagggc cgcataaact
     3601 tcgcgcaact tcggcacagg cggaagcttc aggcccttgc ccgacaatcg tccccccggc
     3661 ccgaacaccc gttccgtcgc ctcggcgatg gcgtccgctc cggcgggttg ttcgagtgcg
     3721 gtgtagtcga tatcggcggt cacgcgttcg aggaggacgt cgcgcccgag caggggcagg
     3781 tgcgtcatgt cgttgccggc tagcagcttg gccaaccgat ggtcgggatg gcggtcgtcg
     3841 gcgagcgctg gtttgacggt tcggaactga aacacctcct cgaacgtgcg cggtgcggtc
     3901 tcgaaacagc gcgcgagctc gcttgcctcc tcggcgaggt agtaacggtt gaggctgtcg
     3961 aaccagacat agcgatagcc gtgtttggcg agaaacggtt cccatgccgg ccaggccggc
     4021 gcgagggtgt agggtgcaag cgcctctacc acgaccacct tcggccgaaa gctctgccag
     4081 tcgccgttga gcagaacctc ctgctcggcg ccttcgacgt cgactttgag gaattcgaac
     4141 acgggcggcg cgtgtcgccg gcaaagctca tgcaatgtcg tgaccggcat ggccatggcc
     4201 tgcgaggatt tcccgaattg ctggtgcgcg gcgcgagcat ggccttcaat catggtcgag
     4261 aggccgtgaa aatcctcgac cagataaaac atggcctcgc cgacgcttgc gccgaggagc
     4321 gcctcgacgt ggcgatctcg cggccggatc gctctgctca gcggcgcgag agtgggattg
     4381 ggctcgaccg tgacgccgtg ccagccctcg agatagaacg cgaacgaagc gttgtcgtaa
     4441 accgggtgcc ccgatccgat atcgatatag aagccatcgc tgcggctgcc gaaacagcgc
     4501 atcaggtaga tgtcttcaaa gcgttgcgcg taagagatgg tcggcttggc catgcgtcac
     4561 gtccgcggcc cggctctcgc gcaggcgctg ccgcgcacga ccggagcata tcatttgtcc
     4621 agctcgtaaa gactgtgcag ggtgcgcacc gcgagctcgg tatagttggc atcgatcagc
     4681 agcgaaaact tgatttccga ggtggtgatg gcgcggatgt tgatgccctt ttctgccagc
     4741 gccttgaacg ccttggcggc gaccccggca tggctgcgca tgccgatgcc gatcaccgag
     4801 atcttggcaa cgtcgtttgc gccgtcgagc cgttcgtagc cgacgtaacc cttcgccttg
     4861 atcagcgtct cggtcgcgcg ctggtagtcg gacgcgggga cggtgaatgt tatgtccgtc
     4921 gtcgcgccgt cggccgagac gttctgcacg atcatgtcga cgttgatgtt ggcgtcggcg
     4981 agcggaccga aaatagcggc ggcgatgccg ggcttgtcct gcacgcgacg gatcgagatc
     5041 tgcgcctcgt ccttggagaa ggcgatgccg gtaacgacct cttgttccac gatctcctcc
     5101 tcgccgcaga tgagcgttcc cggcggcgtc ccgtgcgggt cgatgtcctc cggctgctca
     5161 aagctcgaac gcacgaagat gcgcacatta tgcaccattc cgagctcgac cgaacgcacc
     5221 tgcatcacct tggcgccgag cgaagcgagc tccaacatct cctcgtaggc gatccgttcc
     5281 aggcgttgcg cgcgcggcac gacgcgcgga tcgctggtgt agaccccgtc gacgtcggtg
     5341 tagatgtcgc agcgctcggc cgcgatcgcg gccgcgaccg cgaccgccga ggtgtcggaa
     5401 ccgccgc
//
LOCUS       DATCWM010000608         3310 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_533751, whole genome shotgun sequence.
ACCESSION   DATCWM010000608 DATCWM010000000
VERSION     DATCWM010000608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3310
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_533751"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(12..1940)
                     /locus_tag="VIQ50_11915"
     CDS             complement(12..1940)
                     /locus_tag="VIQ50_11915"
                     /inference="COORDINATES: protein motif:HMM:NF014731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HEY9361133.1"
                     /translation="MNAKRATSQKSAVDPSRGSELHKGSPFFLALTAVGVVFGDIGTS
                     PLYTLAVTFAATGQAAPTAADVLGIISLILWALLAMVSLKYVVLVLCADNDGEGGILA
                     LLSLVDGERIANGPRIPVFVLLGIVGAALLYGDGVITPAISVLSAIEGLKLVAPAFAD
                     FIVPLTLAILIGIFMVQRRGTATIGRLFGPVMVVWFLVIGLLGAVNIVAAPVILKAIN
                     PGEAARFVLANPLIAFAVMGGVFLALTGAEALYADMGHVGPSAIRRAWFALVLPALLL
                     NYFGQGALVLTDPKAIDSPFYKLAPEWALIPLVLLAAMATIIASQALISGVFSLTRQA
                     MQLGLCPRMRIVSTSSEEAGQIYVPTANWLLMIGTLLVVVLFKTSEHLAGAYGIAVSG
                     TMLITTILLYRVAIGRWRWPPAVAVLMIAVFGAVDATFLASNSMKIVEGGWFPITVGT
                     AMVALMLSWRHGASLVRHRLQAMSMPLARFVANIDKMVVVRPRGVAVWLTKVTHGISP
                     VLLHHVKQNHVLYEKLILMTFVPDGRPRVPLAERHSIKDLGHGIYRIEGRLGFMQTPD
                     IPLTLKNCELLGFKVDLDEVHYYIAHEIVDRAARKSAMAAVPFAIYAFLVRIASRAPD
                     FFKIPHERVLEVGYHIEI"
     gene            2406..>3310
                     /locus_tag="VIQ50_11920"
     CDS             2406..>3310
                     /locus_tag="VIQ50_11920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEY9361134.1"
                     /translation="MAVAGDGLEKFEDMIVRQAEATGAQVAAAKAAIGNVIFGQEAVV
                     EQALITVLCGGHALLIGLPGLAKTKLVETMGIVLGLDARRIQFTPDLMPSDILGSEVL
                     DESPGGKRSFRFIPGPIFGQLLMADEINRASPRTQSALLQAMQEHHVTVAGNRHDVPR
                     PFHVLATQNPIEQEGTYPLPEAQLDRFLMQIDVDYPDHDAERKIVFDTTGTEESKPKP
                     TITADELLAAQRLVRRLPVGESVVEAILNLVRSARPGPETGEIGKLIAWGPSPRASQA
                     LMLVARARALIDGRLSPSIDDVLAMA"
BASE COUNT          668 a         1034 c         1076 g          532 t
ORIGIN      
        1 gcggcacggg gtcatatctc gatgtggtag ccgacttcca acactctttc atggggaatc
       61 ttgaagaagt caggagcgcg gctggcaatc cggacgagga acgcgtagat cgcgaacggc
      121 accgccgcca tcgccgactt ccttgcggcg cggtccacga tctcgtgggc gatgtaatag
      181 tggacctcgt cgagatcgac cttgaagccg agcaactcgc agttcttgag cgtcagcggt
      241 atgtccggcg tctgcatgaa gccgagccgc ccctcgatgc ggtagattcc gtggccgagg
      301 tccttgatcg aatggcgctc ggcgagcggg acccgcggcc gcccgtcggg gacgaaggtc
      361 atgaggatca acttttcgta caacacgtgg ttctgcttga cgtggtgcag gagcaccggc
      421 gagatgccgt gcgtgacctt ggtcagccat acggcgacgc cgcgcggccg caccaccacc
      481 atcttgtcga tgttcgcgac gaagcgtgcg agcggcatcg acatggcttg caggcgatgg
      541 cgcacgagcg aggcgccatg gcgccaagag agcatcaatg caaccatggc ggtgccgacg
      601 gtgatgggaa accagccgcc ctcgacgatc ttcatcgagt tggaggcgag aaaggtggca
      661 tccaccgcgc cgaaaaccgc aatcattaaa actgcgaccg cgggcggcca tctccagcgc
      721 ccgatcgcca cacgatagag cagaatggtc gtgatcaaca tggtgccgga cacggcgatt
      781 ccgtaagcac cggccaggtg ctcggaggtc ttgaacagga caacgaccag caaggtgccg
      841 atcatcaaca gccaattggc ggtcggcacg taaatctgac ccgcttcctc agatgatgtg
      901 gacacgatgc gcatgcgcgg gcatagcccg agttgcatcg cctgccgggt cagcgagaag
      961 acgccggaga tgagcgcctg ggacgcgatg atggtcgcca tcgccgccaa caagaccagc
     1021 gggatcagcg cccattccgg cgcgagcttg taaaacggac tgtcgatcgc cttgggatcg
     1081 gtaaggacga gcgcgccctg gccgaaataa ttgagcagca gcgccggcag caccagcgcg
     1141 aaccaggcgc ggcggatggc ggacgggccg acatggccca tgtcggcgta aagcgcttcc
     1201 gcgccggtca gcgcaaggaa cacgccgccc atcaccgcaa aggcgatgag cggatttgcc
     1261 aagacgaacc gcgccgcctc gcccggattg atcgctttga gaatgacggg cgcggcaacg
     1321 atgttcacgg cgccgagcaa cccgatgacg agaaaccaca ccaccatgac cggaccgaac
     1381 agacggccga tggtggcggt cccgcgccgc tgcaccataa agatcccgat caggatcgcg
     1441 agcgtcagcg gcacgatgaa atcggcaaaa gcaggcgcga ccagcttcag gccttcgatg
     1501 gcggagagca cggaaatagc cggcgtgatg acgccgtcgc cgtaaagcag cgccgcccct
     1561 acgatgccca gcaggacaaa caccggaatc cgcggaccgt tcgcaatgcg ctcgccgtcc
     1621 actagcgaca gcaacgccag gatcccacct tcaccgtcgt tgtcggcgca caagaccagc
     1681 acgacgtatt tgagcgacac cattgccagg agcgcccaga ggatcagcga aatgatcccc
     1741 agcacgtcgg ccgcggtcgg cgccgcctgg ccggtggcgg cgaaggtgac agcgagcgta
     1801 tagagcgggc ttgtgccgat atccccgaag acgacgccga ccgcggtgag cgcgaggaag
     1861 aaggggctgc ctttgtgcag ttcgctgccg cgggaaggat cgacggccga cttctgcgac
     1921 gtggcgcgct tggcattcac ggatcctatc cttttgccca cagtcgaaga ttctccacag
     1981 tagcgccggc caacgcttgc agcctcacga tgagttgagt gcaatccgcg cccgtcgtct
     2041 gccattgttt gcctggaact tgtgcagtga ccggctgttt tcccctgcgg ttgtggttgc
     2101 atcgagttga tcccttgccc cgccaaggcc gacggcgaaa agctcaagga gttcaaacat
     2161 tcgcgaccga tcggagcggc cggggttctg gggcgatcgt ggcagacttg cgccgaggcg
     2221 ggatcgcgcc tagtgaaaaa taccgtaatc tcccccaatt gtaaggattc gggcgaaaag
     2281 cgctgcaccg gcgggtatgc gcgtggcccg aatgttgcac gttttttgat caaatctgat
     2341 gggctcggcg aagcgctcga tcttagccgt cgcaagtcat ggatagatga caaggagttg
     2401 aggtcatggc ggtagccggc gatgggctgg aaaagttcga agatatgatc gtgcgccaag
     2461 cggaagcgac gggcgcgcag gtcgccgccg ccaaggccgc gatcggcaac gtgatcttcg
     2521 ggcaggaggc ggtggtcgag caggcgctca tcaccgtgct ctgcggcggg cacgcgctgc
     2581 tgatcggcct tcccggcctc gccaagacca agttggtcga gaccatgggc atcgtgctcg
     2641 ggctcgacgc ccgccgcatc cagttcaccc ccgatctcat gccgtccgac atcctgggca
     2701 gcgaggtgct ggacgagagc cccggcggga agcgcagctt ccggttcatc ccggggccga
     2761 tcttcggtca gctcttgatg gccgacgaga tcaaccgcgc gagcccgcgc acccaatccg
     2821 cgttgctgca agcgatgcag gagcaccacg tgacggtcgc cggcaatcgt cacgacgttc
     2881 cacgcccctt ccatgtgctc gcgacgcaga acccgatcga gcaggagggc acctatccgc
     2941 tgccggaggc gcagctcgat cgcttcctga tgcaaatcga cgtcgattat cccgatcatg
     3001 acgccgaacg caaaatcgtg ttcgacacga ccggcacgga agagagcaag cccaagccga
     3061 ccataaccgc cgacgaattg ttggcggcgc agcgtctggt gcgccgcctg ccggtcggcg
     3121 aatcggtggt ggaggcgatc ctcaatctcg tgcgctcggc ccgtcccggc ccggagaccg
     3181 gcgagatcgg aaagttgatc gcttggggtc cgagcccgcg cgcgagccag gcgctgatgc
     3241 tggtggcgcg cgcccgcgcg ctcatcgacg ggcggctttc gccgtcgatc gacgacgtcc
     3301 tcgccatggc
//
LOCUS       DATCWM010000609         3062 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_58323, whole genome shotgun sequence.
ACCESSION   DATCWM010000609 DATCWM010000000
VERSION     DATCWM010000609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3062
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58323"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..432)
                     /locus_tag="VIQ50_11925"
     CDS             complement(<1..432)
                     /locus_tag="VIQ50_11925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP synthase (glutamine-hydrolyzing)"
                     /protein_id="HEY9361135.1"
                     /translation="MTLLDSSPASGAASRQLAEHDKILIVDLGSQVTQLIARRVREEK
                     VYCEIVPFQKADEAFRRMRPKGVILSGGPASVLDHDAPLAPPAIYAAGVPVLGICYGE
                     QAMAQQLGGTVEGGHHREFGRAEVTVTEDSPLFEGVWRKGER"
     gene            complement(591..2645)
                     /locus_tag="VIQ50_11930"
     CDS             complement(591..2645)
                     /locus_tag="VIQ50_11930"
                     /inference="COORDINATES: protein motif:HMM:NF015523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MltA domain-containing protein"
                     /protein_id="HEY9361136.1"
                     /translation="MWLAAGAASAEGPLKFAGSQLEPVKWSELAGWTTDDHLAAFAAY
                     QASCQALRKKTPRGDDRGQISAALSNACRNAIGLQPKDADTARAFFERNFQPVRISRL
                     GEAEGLLTGYFEPIVAGSRFPSPEFNVPLYRRPKDLLAAGHKPASVAFPNKEGRIGRR
                     NENNDLVPYYDRAAIEAGALDGQKLEICWIKSAFDLLVIQIEGSARVILEDGTPLRVS
                     YDSHNGYRYSSIERVLIDRNLIPREAMSPQHIRDWMAAHPDEAAKVRATNRSYVFFHV
                     TGLSNEGEPIGAQGVPLTPGRSIAVDRLHEYGTPFFIEANLPIDGIKSVSPFGRLMIA
                     QDTGSALVGPARADLYWGAGDDAGRIAGRIRHRGRFAMLLPRELDLTTASTQMPLPVP
                     KPKIPDGEDKKPDGKGRADLANAGETGAGKKPSPDLKIAALEVGKQSGKATAPPAKAG
                     EMAAGKKPSPNLKIVATEAGKQSGKATAPSTMIGEKGAGKSPSPNLKIVATEVAKQSG
                     KATAPSAKAGETAAGKKPSPNLKIVATEAGKQSGKATAPSTKAGQMGAGRKLPLTNLK
                     TAASEGSKQEGQSKTRSAKAVDTVVATRVAKTATPGIDITKQRGKGKAESASSDDATD
                     GRKIPSSKPKVPPTEVKKQDSQRKATSAPAGEGGKAAVRPGAGKPPARERAAAHCSDC
                     VR"
     gene            complement(2861..>3062)
                     /locus_tag="VIQ50_11935"
     CDS             complement(2861..>3062)
                     /locus_tag="VIQ50_11935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361137.1"
                     /translation="APKPAGNAVFPTAVSPKYSSESAGKARMHTCLDQYNANKTANAN
                     GGLRWIQKGGGYYSQCNKQLKG"
BASE COUNT          456 a         1008 c          979 g          619 t
ORIGIN      
        1 gcgctcgccc ttgcgccaca cgccctcgaa caggggcgag tcctcggtta ccgtcacctc
       61 ggcgcggccg aactcacggt ggtgcccgcc ctcgaccgtg ccgccgagct gctgcgccat
      121 cgcctgctcg ccgtagcaga tgccgaggac cggcacgccc gccgcataga tcgccggcgg
      181 cgcaagcggc gcgtcatgat cgagcaccga ggcgggtccg ccggagagga tcacgccttt
      241 gggccgcatc ctcctgaacg cctcgtccgc tttctgaaac ggcacgattt cgcagtagac
      301 tttctcttcg cgcacgcgcc gggcgatgag ctgcgtgacc tgggagccca gatcgacaat
      361 gagaatcttg tcgtgctcgg cgagttgccg ggaggcagcg ccggacgcag gagaagaatc
      421 gaggagcgtc atctcgaagc tatgtgcggg gcgcgcccgc tccggtcaag ggcggtggtc
      481 tgcgctcccg taaaacaacg gggagagaat ccgttcccgg gcgccccctt cccccagggc
      541 tacacggcca gcggcgtcgc cggcgtcgac gctctggtcg aaggcggggg ctagcggacg
      601 caatcgctgc aatgcgcagc cgctctttcg cgcgcaggcg gcttgccggc gcccggcctc
      661 accgccgcct tcccgccctc gccggcgggg gctgacgtcg ctttgcgttg gctgtcttgt
      721 ttcttgacct cggtcggcgg gaccttcggc ttcgacgagg gtatcttcct gccatcagtg
      781 gcatcgtccg aactcgcgga ctccgccttg cccttgccgc gctgtttagt gatgtcgatg
      841 ccaggcgtcg ctgttttcgc cactcgcgtg gcgacgacgg tatctacggc cttagcagat
      901 cgcgttttgc tttgaccctc ctgtttgctc ccttcgctcg ccgcggtctt gagattcgtt
      961 aacggtagtt tcctgccagc tcccatctgg ccggccttgg tggacggcgc tgtggctttg
     1021 ccactctgtt taccggcctc cgtcgcgacg atcttgaggt taggcgacgg cttcttgccg
     1081 gccgccgtct cgccggcctt ggcggacggc gctgtggctt tgccactctg tttggcgacc
     1141 tccgtcgcga cgatcttgag gttaggcgat gggctcttgc cagctccctt ctcgcctatc
     1201 atggtggacg gggctgtggc tttgccactc tgcttgccgg cctccgtcgc gacgatcttg
     1261 agattgggcg atggcttctt gccagccgcc atctcgccgg ccttggcagg cggcgctgtg
     1321 gctttgccgc tctgtttccc aacctccaac gcggcgatct tcaggtcggg cgacggcttt
     1381 ttgccggccc cagtttcgcc ggcgttggcc aaatctgccc tgcccttccc gtccggtttc
     1441 ttgtcttcgc catcggggat cttcggcttc ggcaccggta atggcatctg cgtgcttgcc
     1501 gtcgtcagat cgagttcgcg gggaagcagc atcgcgaagc gaccacgatg gcgaatgcgg
     1561 ccggcgatgc ggcccgcgtc gtcgccggcg ccccagtaga gatctgcgcg cgcaggtcca
     1621 acgagcgccg atcccgtgtc ctgcgcgatc atcagccggc cgaaaggcga gacagacttg
     1681 atgccgtcga ttggcaagtt cgcttcgatg aagaacggcg tcccgtactc gtgcagccta
     1741 tcgaccgcaa tggaccgccc cggtgtcagc ggcacgccct gcgcgccgat cggttcgccc
     1801 tcgttcgata gtccggtgac gtggaagaac acgtaagagc ggttggtcgc ccgcaccttc
     1861 gcagcttcgt cggggtgcgc cgccatccag tcgcggatgt gctggggcga catcgcctcg
     1921 cgcggaatga gattgcggtc gatgagcact cgctcgatcg agctgtagcg atagccgttg
     1981 tgcgagtcat aactgacgcg cagtggcgtg ccatcctcga gaatcacgcg cgccgagcct
     2041 tcgatctgga tcacgagcag atcgaatgca ctcttgatcc agcagatttc aagtttctgt
     2101 ccgtcgagcg cgccggcctc tatggcggcg cggtcgtagt agggcacgag gtcgttgttc
     2161 tcgttgcggc gaccgatccg cccctctttg ttcgggaatg caacggaagc gggcttgtgc
     2221 ccggcggcga ggagatcctt cggccggcga tagagcggga cattgaattc aggactcgga
     2281 aaccgcgaac ccgcgacaat cggctcgaag taaccggtca gaagcccctc ggcctcgccc
     2341 agccgcgaga tgcgaacggg ctgaaaattc cgttcgaaga aggcgcgcgc ggtatctgca
     2401 tcctttggct gcagccctat ggcgttgcgg cacgcgttcg acagcgcggc agagatttgt
     2461 ccgcgatcgt caccgcgcgg tgtcttcttc cgcaacgctt ggcaactggc ctgataggct
     2521 gcgaaagcgg cgagatgatc atcggtggtc cagcccgcga gctcggacca tttcaccggc
     2581 tcgagttggc tgcccgcgaa tttcagcggc ccttccgccg acgcagcccc ggcggcaagc
     2641 cacatgctcg cgccaaagag gctcgcgacc aaccggcgcc cagaagtttg cgcacccgcc
     2701 cgaccgtccc gcatgcaaat aaatgcatga cggacaggaa tggttcccct gcgcgcacga
     2761 gcattccctc gggcacggtt aagcggctgc cacgatggcg cgccggtatc gaaatgctac
     2821 cgcgggcggg ggcgcggagt gatgattcgc gcggctcagc tcaacctttc agctgcttat
     2881 tgcactggct gtaatagccg ccaccctttt ggatccacct cagcccgccg ttcgcattgg
     2941 ccgttttgtt ggcgttgtat tgatcgaggc aggtgtgcat gcgcgccttt ccggccgact
     3001 cgctcgagta tttcggagag acggccgtcg ggaaaaccgc attcccagcg ggtttcggcg
     3061 cc
//
LOCUS       DATCWM010000610         3208 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_47643, whole genome shotgun sequence.
ACCESSION   DATCWM010000610 DATCWM010000000
VERSION     DATCWM010000610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3208
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47643"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..248
                     /locus_tag="VIQ50_11940"
     CDS             <1..248
                     /locus_tag="VIQ50_11940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361138.1"
                     /translation="WQGQRLRQGASVKAVWIAENIGEDFPQDFKIDEASAVAASPTAR
                     GAFTLARPEDGWMPGDYRVEFYVDGVLVDAVKIKIVE"
     gene            366..1013
                     /locus_tag="VIQ50_11945"
     CDS             366..1013
                     /locus_tag="VIQ50_11945"
                     /inference="COORDINATES: protein motif:HMM:NF022441.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2807 domain-containing protein"
                     /protein_id="HEY9361139.1"
                     /translation="MRKVLIVFLAGCVVLLAGCHLPGIRGNGQIRTEERTIAAFANLD
                     AAGAFEIEWQNGSPALRITTDENLLRYIENDVSDDTLHLRTREHVWPTHGIKVVISSP
                     TRTGGRIRGAVKLTVKQLSGPTFALESKGASQISLDGNIDRLLVDMTGASQLAADRLQ
                     AKTAEISTTGAGDADVAVTDTLKVVITGAGKVTYSGNPPTIKKQITGAGSIRHKK"
     gene            1043..1360
                     /locus_tag="VIQ50_11950"
     CDS             1043..1360
                     /locus_tag="VIQ50_11950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361140.1"
                     /translation="MKARNKLLKQQRSATVVGSKLKQWIEAARLWRELSKQIEAALVI
                     GYDDWLKELPRAIRGAASPEHGAEFASKVLDLYRPDATARRIYDELVDSDSLWTSASV
                     TKF"
     gene            complement(1421..>3208)
                     /locus_tag="VIQ50_11955"
     CDS             complement(1421..>3208)
                     /locus_tag="VIQ50_11955"
                     /inference="COORDINATES: protein motif:HMM:NF013713.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361141.1"
                     /translation="LGRGAPRPALRDDNGQPQPTHLSVVIDGGAKTPMARFDGKLDAL
                     DYFRWDVAALGYRVRRSKSVLVIGAGAGRDILTARLFGVDSIRAVEINPLIVDVTRRT
                     FGSFGGDPYGLPGVSLTIADGRSFAAQSQETFDVVQLTAVDTFAASGGGALALVEHSL
                     YTVEAFRDYHDRLSPDGILTVTHKWGVLEPERALRMVDLIRRAWTDRGHADVSRHVVV
                     VGRDFAWGTVLVSRAPFRPEEIEAIASLASELGFGLLYAPDHPESIAEIRDLLGADPE
                     RFLGAYSSAVAATTDDRPYFFFFDRPGAFVKSGLAELFQLPSFFRGTAEQHNAPTLLV
                     RLLVWMTGASLLLMFLVPMILGRLRLETARGAERGLLYFAGIGLGFITIEIPMIQRYG
                     LLLGQPIYAFAVILGCVLVASGVGSLLSSRIADERLLSTLRTILVLVAIGAALHAWLV
                     PSLIAAGLRWTTAPRLLATFASIVPLALLMGFPMPLGIRMLERNTPRAIAWAWGINGS
                     LSVLGSIVAMMVSVTVGITATMLFGAAAYLLSASAAGSAGKAADPRRVLSMPSRVACD
                     SGSSASARSRGRSRRPTAALVAVASSVRV"
BASE COUNT          698 a          970 c         1040 g          500 t
ORIGIN      
        1 gctggcaggg ccagcgtttg cgacaaggcg caagcgtcaa ggctgtgtgg atcgcggaaa
       61 acattggcga agattttccc caggatttca aaatcgacga ggcctctgct gtcgctgcaa
      121 gcccgacagc acgcggcgca ttcacactcg cgaggcccga agacggatgg atgccgggcg
      181 attaccgcgt ggaattttat gtcgacggtg ttctcgtcga cgcggtgaag attaaaatcg
      241 tggagtgatc aatgaggacg gtctttagtc ccccgctggg gcactctcga gagacgcctc
      301 ccatttgaat tttgtcgaat ccaaaaagca gcgacgacgc atcataacgg aaaacacgtt
      361 tttacatgag aaaggtcctg atcgttttcc ttgctgggtg tgtcgttttg cttgctggat
      421 gccatttgcc cggcatccga gggaatggcc aaatcagaac tgaggaacga acaatcgccg
      481 cttttgccaa tctggacgcg gccggcgctt tcgaaattga gtggcaaaac ggatcgcccg
      541 ctcttcgaat cacgacggac gaaaatctgc tgcgctacat tgaaaatgat gtttcggacg
      601 acacgctgca tttgcggacg cgggagcacg tctggcctac ccacggaatc aaagtcgtca
      661 tctcaagtcc aacgcggaca ggtggcagga tcagaggcgc cgttaagcta acggtaaagc
      721 agttgagcgg gccaaccttt gctctagaat cgaagggcgc gtcacagatc tcacttgatg
      781 gcaacatcga ccggctcttg gtcgacatga ccggcgcgag ccagctagcg gccgatagac
      841 tgcaagctaa aacagccgaa atctccacca ccggcgctgg cgacgcggac gttgcagtca
      901 ccgatacgct gaaagttgtg atcacgggcg ccggcaaagt cacctactcc ggcaacccgc
      961 ccacgatcaa gaaacagatc actggcgccg gctcaattcg ccacaagaag taaaaggaaa
     1021 accgccagcg cgaagagaat ggttgaaagc gcgcaataaa cttctcaaac agcaacgtag
     1081 cgcgactgtc gttggatcga agttgaagca atggatcgaa gcggcgcgtc tgtggcgcga
     1141 gctatcgaag cagattgagg ccgcattggt gatcggttat gacgattggt tgaaggaatt
     1201 gccaagggcg attcgcggag cggcttcacc ggagcacggc gcagagttcg ccagcaaggt
     1261 tcttgatctt tatcggccag acgcaacggc acgccgcatc tacgatgagt tagtcgactc
     1321 ggactcgttg tggacatcgg caagcgttac aaagttttag atcgcgtatt tgccagcacc
     1381 acgaaaatca tggacgcgat tcatgatgtg ttcacacaca tcaaacgcga actgaagaag
     1441 caaccgcgac caaagcggcc gtcggcctcc gggacctacc tcgcgaacgg gcgctggcgc
     1501 tcgaccccga gtcgcacgcc acgcgcgacg gcatcgagag cactcggcga ggatccgcgg
     1561 ccttgcccgc gcttcccgcc gccgacgcgg aaagcaagta agcggccgcg ccgaagagca
     1621 tcgtcgccgt gatccccacg gtcaccgaga ccatcatcgc cacgatcgag ccgagcaccg
     1681 acaggctccc gttgatcccc cacgcccaag cgatcgccct cggagtgttg cgctcgagca
     1741 tgcggatgcc gagcggcatc ggaaagccca tcagcaacgc gagcggaacg atgctcgcga
     1801 acgtggcgag aagccgcggg gcggtcgtcc agcgaagacc ggcggcgatc aagctcggca
     1861 ccagccaggc gtgcagcgcc gcgccgatcg caaccagcac gagaatcgtc cgcagcgtcg
     1921 aaagcagccg ttcgtcggca atgcggctcg agagcaagct gcctacaccg ctcgcgacca
     1981 ggacgcaacc gaggatgacc gcgaaagcgt agatcggctg gccgagcagc agcccgtagc
     2041 gctggatcat cgggatctcg atcgtgatga agccgaggcc gatgccggcg aagtagagga
     2101 ggccgcgctc cgcgccgcgc gcggtctcga gccggagcct gccgaggatc atcggcacga
     2161 ggaacatcaa gaggaggctg gcgccggtca tccagacgag cagccggacg agcagggtag
     2221 gggcgttgtg ctgctcggcg gtgccccgga agaaggacgg cagctgaaag agctccgcca
     2281 ggccgctctt cacgaacgcg ccgggtcggt cgaagaagaa gaaatacggc ctgtcgtcgg
     2341 tggtggctgc gaccgctgag ctgtaggcgc cgagaaagcg ctccgggtcg gcgccgagca
     2401 gatcccggat ctccgcgatc gactccggat gatccggagc atagaggagg ccgaagccga
     2461 gctccgacgc aagcgaggcg atggcctcga tctcttcggg ccggaacggc gcccgcgaca
     2521 cgaggaccgt tccccaggcg aaatcgcggc cgacgaccac gacgtgccgc gagacgtcgg
     2581 catggccgcg atcggtccac gcgcggcgga tgaggtcgac catgcggagc gcccgttccg
     2641 gctccaggac gccccacttg tgcgtgacgg tcagaatccc gtccggagag agccgatcgt
     2701 gatagtcgcg gaacgcttcc accgtgtaca ggctgtgctc gaccagggcg agcgctccgc
     2761 cgcccgacgc ggcgaaggtg tcgacggcgg tgagctgcac gacgtcgaag gtctcttgcg
     2821 attgcgccgc gaagctgcgg ccgtcggcga tcgtcaggga gacgccggga agaccgtagg
     2881 gatcgccgcc gaaagagccg aacgtgcggc gcgtgacgtc gacgatcagc gggttgatct
     2941 ccaccgcgcg gatcgaatcg acgccgaaga ggcgcgcggt gaggatgtcg cggcccgcgc
     3001 cggcgccgat cacgagcacg ctcttcgagc ggcggactcg atagccgagc gccgcgacgt
     3061 cccagcgaaa gtaatcgagc gcgtcgagct tgccgtcgaa tcgcgccatc ggggtcttcg
     3121 ccccgccgtc gatgaccacc gaaagatgag tgggctgagg ttggccgttg tcgtcccgca
     3181 acgccggccg cggcgcgccg cgcccgag
//
LOCUS       DATCWM010000611         5043 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_382329, whole genome shotgun sequence.
ACCESSION   DATCWM010000611 DATCWM010000000
VERSION     DATCWM010000611.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5043
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_382329"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1223)
                     /locus_tag="VIQ50_11960"
     CDS             complement(<1..1223)
                     /locus_tag="VIQ50_11960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9361142.1"
                     /translation="MIRLSTFTPRMWLILAHDLLATAAAVVASFFIRFEETGLTDRWR
                     FLAILLPAFVVYSSFVYVFSGLYKAKWRFTSLPDLFNIVRAATVLALTLLALDYVLVA
                     PNVYGTFFFGKITIVLYWLLQIAFLSGPRIAYRYFRYTRTLRHAKAGDSMPILVVGRT
                     ADADVLLRAIESGAVKKIRPVGILSPSLADRGQAIRGISVLGGPDDIEAVVGELSKRG
                     TNVTRLVLTPTTLAPDAKPETILMRARRLGLVTSRLPSLDDGGEALRLAPVNVEDLLL
                     RPKVRIDYRRLEAFVRNKSIIVTGGGGSIGAEICDRIVTFGAGRVLVIENSEPALHAV
                     LETLAAKQSRAKIEGRLADVRDRARMFRLMKTFRPDIVFHAAALKHVPLLEQDWEEGV
                     KTNVFGSVNVADASAA"
     gene            1508..1921
                     /locus_tag="VIQ50_11965"
     CDS             1508..1921
                     /locus_tag="VIQ50_11965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361143.1"
                     /translation="MRAYLMALLVALGGCSASDVIQDWAPTTATNTPTAPAELSQPNY
                     RRIVADNIRTVLPNIDSSGDLEISGARLVDHLKGPAWLTCLKVDARGKPQNQALFIQG
                     DKIIDSRVGIVIDQCYKQTYERFDLPPPGAKKTGP"
     gene            complement(1948..2787)
                     /locus_tag="VIQ50_11970"
     CDS             complement(1948..2787)
                     /locus_tag="VIQ50_11970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY9361144.1"
                     /translation="MESNPPNLDRATVDDFGREWRRFDQSGVSGAELQRWFAEYFAIF
                     PWDSLPSDAVGFDAGCGSGRWAALVAPRVGRLHCIDASADALSVVQKSLAGLSNVSFH
                     AAPLDAMPLADNSMDFGYSLGVLHHLPDPAAGLAACVRKLRHGAPMLVYIYYAFDNRP
                     AWFRLLWRTSDLLRRLLSRAPFRLKSAIAELLAACIYWPLARGAQVVERFGGNVANWP
                     LGAYRRRSYYAMRTDALDRFGTRIEHRMTQTQIRTLMEDAGLRDIHFREAVPFWCAVG
                     RKI"
     gene            complement(2847..3965)
                     /locus_tag="VIQ50_11975"
     CDS             complement(2847..3965)
                     /locus_tag="VIQ50_11975"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HEY9361145.1"
                     /translation="MTSLDLPEHPRILVITLRRLGDVLLTTPLIRTLKRGLAASSVTA
                     LVFRGTEGMLAGNPDVDEVLATSERPSLAETAALVRRLWRGYDLAVSTQAGDRPTFLA
                     LMASRRRVGLVPRAGQTGAWWKRHAHHIPVVAEPDCHRVTQLLALASALGLERAPDIV
                     CPQGGAAEEFTPRMPYAVVHASPFYRYKRWTDEGWRGLARGLAERGLALVATEGRDPA
                     EQAYIDGLWGPADPPVTRVRGRLDWASLSALLKGAAIYIGPDTSMTHLAAASGCPTVA
                     LFGPTSPRLIGPWPSGGLAEPWDHAGTIQRRANVWVVQNPLHCLPCEKLGCEGHLDSY
                     SRCLDELPVRSVLSAVDQALGSANRSPALANPGSMHAK"
     gene            complement(3997..4428)
                     /locus_tag="VIQ50_11980"
     CDS             complement(3997..4428)
                     /locus_tag="VIQ50_11980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6165 family protein"
                     /protein_id="HEY9361146.1"
                     /translation="MSAPRDAPPQDILVPISVGELMDKITILEIKSERIKNPSQLENI
                     VHELEALRAVRLRDIERAMLDKLSAELKRVNAKLWDVEDAIRDCEARSDFGEPFIELA
                     RMVYRLNDERSRLKKAINVASGSRIVEEKSYKSLQREDCDS"
     gene            complement(4425..>5043)
                     /locus_tag="VIQ50_11985"
     CDS             complement(4425..>5043)
                     /locus_tag="VIQ50_11985"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HEY9361147.1"
                     /translation="TLVILAVMLLLWGVRQFGWKGGLGAALIGIVLAGAVWASSPYLR
                     ERISGSMKEMQTYEAGQVNSPTGLRIEYWKKSLAFIAEAPLIGHGTGTIPKLFQRDTT
                     AGTLPELMTTNPHNQTLAVAIELGLAGVLVLLAMWLAHLALFRGVSLAAWFGLLVVSD
                     NVVSSLFNSHLFDFGQGWLYVLGVGIAGGMVLHAADAAGKAEEKA"
BASE COUNT         1000 a         1596 c         1597 g          850 t
ORIGIN      
        1 gcggcggagg catcggcgac attgaccgag ccgaagacat tggtcttgac cccctcctcc
       61 cagtcttgct ccaggagcgg cacgtgcttg agcgctgccg cgtggaacac aatgtccggc
      121 cgaaaggtct tcatcaggcg gaacatgcgg gcgcggtccc gcacgtcggc aagacggccc
      181 tcgatcttcg cccgtgattg tttggcggcg agcgtttcca gcaccgcgtg cagggcaggc
      241 tccgagttct cgatcaccag aacgcgcccc gcgccaaagg ttacgatacg gtcgcagatt
      301 tcggcgccaa tcgatccgcc gccgccggtg acgatgatcg atttgttgcg gacaaaagct
      361 tcgagacgac ggtaatcgat tctcaccttc ggccgcagca gcaagtcctc gacgttcacc
      421 ggcgcaagcc gcaacgcctc gccgccgtcg tcgagcgagg gaagccggct ggtaaccagt
      481 cccaagcgcc tggcccgcat caagatcgtt tcgggttttg catccggcgc gagcgtggtt
      541 ggcgtcagca cgagtcgcgt cacgttggtg ccacgcttgc tgagctcgcc gacgacggct
      601 tcaatgtcgt ccggaccgcc gagcacggaa atgccgcgta tggcctggcc ccggtcggcc
      661 aacgacggtg acagaatgcc aacaggacga atcttcttca ccgccccgct ttcgatcgcg
      721 cgaagcagca catcggcatc ggcggtgcgg ccgacgacga gaatgggcat cgaatcgccg
      781 gccttggcgt gccgcaacgt gcgggtgtag cggaaatagc gataggcaat gcgcggcccg
      841 gatagaaaag cgatttgcag cagccaatag agaacgatcg tgatcttgcc gaagaagaaa
      901 gtgccgtaaa cattcggcgc cacgagcacg taatcgagcg ccaacagcgt cagcgcgagc
      961 acggtcgcag cacgcacgat gttgaaaagg tcgggaagtg aggtaaagcg ccacttcgcc
     1021 ttgtacagac cggagaagac gtagacgaag ctggaataga cgacgaaggc gggcagcaaa
     1081 atagccagga accgccagcg gtcggtcagc cctgtctcct cgaaacgaat gaagaagctc
     1141 gcgaccaccg ccgccgccgt ggcgaggagg tcgtgcgcca gaatgagcca catccgtgga
     1201 gtgaaagtcg aaagccggat catcgtcccg atattgccgc gcaattacgg cgcccgaacc
     1261 atcaataccg acctttgcct gcgcgcgcta cctcgcggag gtatatcgcg gcggcgcgcc
     1321 atcaatcaat cgccgcattc cgcagctata tagttaacgg caactgtagg cctcgccggc
     1381 gcttctgcgt gtgagatcat acgcatgcct ctgagtgctt actccgtccc ggcggagggt
     1441 attttgcagt cagaggcgat cggaaggcgc gattgtcgcg caggaagcat agccaggtca
     1501 acttgccgtg cgtgcgtatc tgatggcatt gctggtggcc ctgggcggat gctccgcgag
     1561 cgacgtaatc caggactggg cgcccaccac cgccacgaac actcctaccg ccccagccga
     1621 gttgtcgcag ccgaactacc gccgcatcgt cgccgacaac atcagaacgg ttttgccgaa
     1681 tatcgacagt tcgggtgact tggagatctc cggcgcgcga ctggtggatc acctcaaggg
     1741 gcctgcctgg ctcacatgtc tcaaggtcga tgcgcgcgga aaaccgcaga accaggcgtt
     1801 gttcattcaa ggggacaaga tcatcgactc gcgcgtcggc atcgtcatcg atcagtgcta
     1861 caagcagacg tacgaacgtt tcgatttgcc gcctcccggg gcgaaaaaaa ccgggccctg
     1921 atcggccgcg taactgggtc gatcgcgcta gatcttgcgg ccgacggcgc accagaatgg
     1981 caccgcctcc cgaaagtgta tgtcgcgcaa cccggcatct tccatcaacg tcctgatctg
     2041 ggtttgcgtc atgcgatgtt cgatgcgggt gccgaagcgg tcgagcgcgt cggtgcgcat
     2101 ggcataataa ctgcgccgac ggtaggcgcc gagcggccaa ttggccacat tgccgccaaa
     2161 ccgctcgacg acctgcgcgc cgcgcgccaa cggccaatag atgcaagcgg cgagaagttc
     2221 ggcgattgcc gatttcaacc ggaacggagc ccgcgaaaga agccggcgca agaggtcgct
     2281 cgttcgccac agcagacgaa accacgctgg ccggttgtcg aaggcgtaat agatatagac
     2341 gagcatcggc gcaccgtgtc tgagcttccg cacgcacgcg gcgaggccgg ccgccggatc
     2401 gggcaaatgg tgcaggacgc cgaggctgta accgaaatcc atgctgttgt cggccaaagg
     2461 catggcatcg agaggggctg cgtggaagct cacgttgctc aagcccgcca ggcttttttg
     2521 cacgactgac aatgcgtccg cgcttgcgtc gatgcagtgc agccggccga cgcgcggcgc
     2581 gaccagcgcg gcccatcgcc cgcttccgca gccggcatca aagcccacgg catcggacgg
     2641 cagactgtcc cagggaaaga tggcgaagta ctcggcgaac cagcgctgca gttccgcacc
     2701 ggacaccccg ctctgatcga agcgccgcca ttcgcggcca aaatcgtcga cggtggcacg
     2761 atcgagattg ggaggattgc tctccatcgc cgctcgttct gcgagaatcc tggcctgcac
     2821 ctgcatgtat tcgatagagg tcagagttac ttcgcgtgca tcgacccagg gttcgcgagt
     2881 gccggagaac ggttagcgct tcccagcgct tggtcgactg cgctcagaac cgagcggacc
     2941 ggtagctcgt cgagacagcg actgtagctg tcgaggtgac cttcgcagcc cagcttctcg
     3001 cacggcaagc aatgtagcgg gttctgcacc acccacacgt tggcgcggcg ctggatcgtg
     3061 ccggcgtggt cccacggttc ggccagtccg cccgacggcc acggcccgat caggcgaggg
     3121 ctggtcggac cgaaaagcgc gacggtcggg caaccgctcg cggccgcgag gtgggtcatt
     3181 gaagtatccg gcccgatata gatcgccgca cccttgagca atgcgctcag gctcgcccaa
     3241 tcgagacgcc cgcgcacgcg cgtcacgggg ggatcggcag gcccccacag gccgtcgata
     3301 taagcttgct ccgcgggatc ccggccttcg gtcgccacca gcgcgagtcc gcgctcggcc
     3361 agtccgcgcg ccaagccgcg ccagccctcg tcggtccagc gcttgtagcg atagaacgga
     3421 ctggcgtgca cgacggcata aggcatgcga ggggtgaact cctcggccgc gccaccttgc
     3481 ggacacacga tatccggcgc ccgctcgagg ccgagcgcgc tggcgagcgc caggagttgc
     3541 gtcacccggt gacaatcggg ctccgccacg accggaatgt gatgcgcgtg gcgcttccac
     3601 catgcaccgg tttggccggc ccgcggcacg agtccgaccc gacggcgcga tgccatcaac
     3661 gccaaaaagg tgggccggtc gccggcttgg gtcgaaacag cgaggtcata gccgcgccac
     3721 aagcgccgga cgagagccgc cgtctccgcc agggagggac gctctgacgt cgcgagcacc
     3781 tcatcaacgt cgggattgcc ggcgagcatc ccttcggtgc cacgaaagac cagcgcggtg
     3841 actgaactgg ccgccaaccc tcgtttcaag gtgcggatga ggggagtcgt gagcagcacg
     3901 tcgcccagcc gccgcagcgt gatcacgagg atgcgcggat gttcgggtag atcgaggctc
     3961 gtcattgcgt tgtccaacgg cgtggacggc ttccgctcag gaatcgcagt cttcacgttg
     4021 aagcgattta taggacttct cctcgacaat acgcgacccg gaggcaacgt tgatcgcctt
     4081 cttgaggcgc gagcgctcat cattgagccg gtaaaccatg cgcgcgagct cgatgaaggg
     4141 ctcgccaaaa tcagagcgcg cctcgcaatc gcggatggca tcctccacgt cccagagctt
     4201 tgcattcacc cgcttgagct cggcgctgag cttgtcgagc attgctcgct ctatgtcgcg
     4261 cagccggacg gcgcgcaacg cttcgagctc gtgcacgatg ttctcgagct ggctcgggtt
     4321 cttgatgcgc tcggacttta tttcgaggat cgtgatcttg tccatcagct cgccgaccga
     4381 gatgggcacc aggatatctt gtggcggggc gtcgcgcgga gcgctcatgc tttctcctcg
     4441 gctttgcctg cggcatccgc cgcatgcaga accattccgc cggcgatgcc gacgccaaga
     4501 acataaagcc agccttggcc gaaatcgaac agatgcgagt tgaagaggga ggacacgacg
     4561 ttgtcgctca ccacgagcag gccgaaccac gcggccagcg aaacgccgcg gaacagggcg
     4621 agatgggcca gccacatcgc cagcagcaca aggacgccgg caaggccgag ctcgatcgct
     4681 accgcgagcg tctgattgtg tgggttcgtg gtcatgagct ccggaagagt gccggcggtc
     4741 gtatcacgtt ggaagagctt tggaattgtt cccgttccat ggccgatgag gggcgcctcg
     4801 gcgatgaagg cgagcgattt cttccagtat tcgatgcgaa gccctgtcgg gctgttgacc
     4861 tggccggcct cataagtctg catttccttc atggaacccg agatgcgctc gcgcagatag
     4921 ggtgaggatg cccacaccgc acccgcgagg acaatgccga tcagcgcggc gccgaggcct
     4981 cccttccatc cgaattgccg taccccccac agcagcagca tcaccgccag aatgacgagg
     5041 gtt
//
LOCUS       DATCWM010000612         2756 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_501159, whole genome shotgun sequence.
ACCESSION   DATCWM010000612 DATCWM010000000
VERSION     DATCWM010000612.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2756
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_501159"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(187..1038)
                     /locus_tag="VIQ50_11990"
     CDS             complement(187..1038)
                     /locus_tag="VIQ50_11990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HEY9361148.1"
                     /translation="MESVESCARAATRFAAFALVALALAACSMFDKTEPVAPDEPADK
                     LYNEGLYLLNSKKDPKNAAKKFEEVDRQHPYSEWARKALIMSAFAYYQGNAYDDCINT
                     ARRYVTLHPGSPDAAYAQFLIGSSYFDQMPEISRDQDRTEKAMQALDEVVRKYPDSEY
                     AVAAKRKIEIARDQLAGKEMDIGRQNLNSRNFVGAINRFKVVVTRYQTTRHVEEALFR
                     LTEAYMALGIVEEAQTSAAVLGHNFPDSRWYKDAYALMQERGVEPNENKGHWISQAFT
                     KLASGKF"
     gene            complement(1151..2098)
                     /gene="lpxC"
                     /locus_tag="VIQ50_11995"
     CDS             complement(1151..2098)
                     /gene="lpxC"
                     /locus_tag="VIQ50_11995"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HEY9361149.1"
                     /translation="MKVARQTTLRDHTELCGVGIHSGLPVTLTLHPADADTGLRFVRT
                     RLDGWQEREIPADMSAVTATEFATVLGDASGPLVSTAEHVLAALSGLGVDNAVIEIDG
                     PEAPIMDGSAAPFVAAIDAVGLQTLDRPRRYIKMLKPVQVAKGDAYGEIRPNPRGFRV
                     EAEIEFEHALIGRQARALDIKPETFRREIARARTFGFLRDVASLWNAGYALGASLENT
                     LVVSDNRILNPEGTRFPDEFVLHKILDAVGDLALAGAPLLGTYRSVRGGHKLNHALLC
                     ALMADASAWTWVDGEVPRPVVGHAEIASRLTPAFGPDRS"
     gene            complement(2532..>2756)
                     /locus_tag="VIQ50_12000"
     CDS             complement(2532..>2756)
                     /locus_tag="VIQ50_12000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEY9361150.1"
                     /translation="PMDRPIERPAAAPPPPPRPSMAPPMMPRGVEPVSDYAKRPSHHG
                     LDALTRPVPAQPPLEEDQLDIPAFLRRQAN"
BASE COUNT          497 a          862 c          892 g          505 t
ORIGIN      
        1 gtttgccgga tgccctgccg cgggccacaa ccggtggcga cgcgcatgca aatcggggtg
       61 atgaattccc accgcggcgg agcttgggcc tgtctgaaac gacgcgctgt aggcgccgca
      121 ggttgggtgg agcccgcttg cggtgtcaag cccggcagat gtggacgaag cgaattccgc
      181 gccgatctag aacttgcccg aggccaactt ggtgaacgct tggctgatcc aatggccctt
      241 gttctcattg ggctcgacgc ccctctcctg catgagggca taggcgtctt tataccaacg
      301 gctgtccgga aaattatgac ccagcacggc ggccgacgtc tgcgcttcct cgactatgcc
      361 gagcgccatg taggcttcgg tcaaccgaaa caacgcttcc tcgacgtgac gcgtggtttg
      421 gtagcgtgtc accacgacct tgaagcgatt gatcgcaccg acgaagttcc gggaattcag
      481 attttgacgg ccgatatcca tctccttgcc ggccagctga tcgcgcgcga tctcgatctt
      541 acgcttggcc gcgacggcat actcggaatc ggggtatttg cggaccacct cgtcgagcgc
      601 ctgcattgcc ttctcggtgc gatcctggtc gcgcgagatc tcgggcatct ggtcgaagta
      661 ggacgagccg atgaggaact gcgcatatgc cgcgtccggg ctccccggat gtagggtgac
      721 gtagcgccgg gcagtattga tgcagtcgtc gtaggcattg ccctggtaat aggcgaaggc
      781 cgacatgatc agggccttgc gcgcccattc cgaatagggg tgctggcgat ctacctcttc
      841 gaacttcttc gccgcgttct tgggatcctt cttgctattc agaaggtaga gaccctcgtt
      901 atagagcttg tcggcaggct cgtcgggcgc aacaggttca gtcttgtcga acatgctgca
      961 ggcggcgagc gccagcgcca ctagcgcgaa ggcagcaaag cgcgtcgcgg cgcgcgcgca
     1021 gctttccacg ctctcgatcc tcgttgaaaa cacccagccc ctcgccgcct ataaatcccc
     1081 gtcgcgtcaa ggaaataggc cgccattccg cccggaatgt ggcagccgca accgattgtg
     1141 ggggttgaat ttaagaccgg tccgggccga aggccggggt caggcgggag gcaatctcgg
     1201 cgtggccgac gacgggccgc ggcacctccc cgtccaccca ggtccaggcg cttgcatccg
     1261 ccatcaacgc gcacagcagc gcatggttga gcttgtggcc gccgcgtacg gagcggtagg
     1321 tgccgagcaa gggagcgccc gcgagcgcca agtcgccgac ggcgtccaat atcttgtgta
     1381 gaacaaactc gtcggggaac cgcgtacctt ccgggttgag aatacggttg tcgctgacca
     1441 cgagcgtatt ttccagcgaa gcgcccagcg cgtagccggc gttccatagg ctcgccacat
     1501 cgcgcaggaa tccgaaggtg cgagcacgtg caatctcgcg ccggaatgtt tccggtttga
     1561 tgtcgagcgc acgcgcttga cgtccgatca gcgcgtgctc gaactcgatc tccgcctcca
     1621 cgcggaaacc ccgcggattc ggccgtatct cgccataggc atcgcccttc gctacctgga
     1681 ccggcttgag catcttgatg tagcggcgcg gccggtcgag cgtctggagg cccacggcat
     1741 cgatggcggc cacgaagggc gccgcgctgc catccatgat cggcgcttca gggccgtcga
     1801 tttcgatgac ggcattgtcg acaccgagac ccgagagcgc ggccaacaca tgctcggcgg
     1861 tggacacgag cgggccggag gcatcgccga gcacagtggc gaactcggtg gcggtcaccg
     1921 cgctcatatc agccgggatt tcgcgctcct gccatccatc gagccgggtg cggacgaaac
     1981 gcaatccagt atcggcgtcg gccgggtgca aggtgagcgt gacaggtaaa ccggaatgaa
     2041 tgccgacccc acacaattcc gtgtggtcgc gaagcgtcgt ctgcctggcg actttcataa
     2101 tcccgtccca gccactcccc ccacgcgcgt caactggacg cggcggacca cattagacgg
     2161 gtgacgtcgg tcgcattcct gccatcggta aggctgtacg aaaaccgcgg gcaaggatac
     2221 cggccgcgta gtcccccgac gaaaacccct ttgacggtgg aagcttagct gtggtcgcgc
     2281 cgaacgccaa ctcacgcttt tttaccgact gttaccaccg gccgccgcaa tcgcggcaag
     2341 cgctgggcgg gcggcggcat ccggcgcttt tgcaccgttt tggcgggtgg gccgtttcgc
     2401 cgcgggcgcg ccccattgtc agcgcgaggg gtcagaaaag gatatttgaa ttcagaggca
     2461 taaggcggac ctcgccgccg ggcaatcccg gcggttcagc cgggactgct atcacttggc
     2521 gcatatccga atcagttggc ctgtcggcgt aggaacgccg gaatatccaa ctgatcctct
     2581 tccaatgggg gctgcgccgg caccggccgg gtcaaagcat cgagcccgtg gtgggagggg
     2641 cgcttggcat aatcggagac cggctcgaca ccgcgcggca tcatgggcgg cgccatggag
     2701 ggtcgcggcg gtgggggcgg cgcagcagcg ggccgctcga tcggccgatc catggg
//
LOCUS       DATCWM010000613        10037 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_9831, whole genome shotgun sequence.
ACCESSION   DATCWM010000613 DATCWM010000000
VERSION     DATCWM010000613.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10037
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9831"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1224)
                     /gene="pnp"
                     /locus_tag="VIQ50_12005"
     CDS             complement(<1..1224)
                     /gene="pnp"
                     /locus_tag="VIQ50_12005"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEY9361151.1"
                     /translation="MFDIHRVELDWGGRKLVLETGKIARQAEGAVVATYGESKVLATV
                     VAAKEPREGIDFLPLTVDYQEKFYAAGRIPGGYFKREGRPTEKETLVSRLIDRPVRPL
                     FADGWRNETQIIVTTLSHDLENDPDVLAMIAASAALTLSGAPFMGPIGAARVGFVNNE
                     YVLNPLLDEMTESQLDLVVAGTQDAVLMVESEAKELSEEVMLGAVMFGHRHFQPVIDA
                     IIKLAEKAAKEPRELRVADISALEKEMLALVEPDLRAAYAIAHKMERHQAVDSAKAKV
                     MAHFCPEGGDNPPYSTQQVADVFKKIEAKIVRLNILDTGHRIDGRDVKTVRPIACEVG
                     VLPRAHGSALFTRGETQALVIATLGTGEDEQWIDALQGTYKETFLLHYNFPPYSVGET
                     GRMGSPGRREIGHGKL"
     gene            complement(1473..1742)
                     /gene="rpsO"
                     /locus_tag="VIQ50_12010"
     CDS             complement(1473..1742)
                     /gene="rpsO"
                     /locus_tag="VIQ50_12010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HEY9361152.1"
                     /translation="MSITPGRKAEVIKTYAVKAGDTGSPEVQVAILSERINSLTEHFK
                     THVKDNHSRRGLLKLVSQRRQLLDYLARVDAARYKSLIERLGIRR"
     gene            complement(1958..2917)
                     /gene="truB"
                     /locus_tag="VIQ50_12015"
     CDS             complement(1958..2917)
                     /gene="truB"
                     /locus_tag="VIQ50_12015"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HEY9361153.1"
                     /translation="MTRVETEPSPPQARKREKRDVHGWVVLDKPVGMSSTHAVSVVKR
                     LFQAKRAGHAGTLDPLASGVLPIALGEATKTVSFVMEGRKVYHFTVRWGEERDTDDAE
                     GRITGLSAERASADAIGAALPRFVGQITQVPPRFSAVKVDGERAYDLARDGETVEIAA
                     RPVEIHRLELIETADQDHAKFVAECGKGTYVRALARDLGRLLGCLGHVAALRRTVVGP
                     FDEDVGVSLDALQRPRPDETAAAELAALLPVEAGLAALPALRVSTSDAGRLTRGQAVL
                     LRGRDAPVMAGWVAVSSQGALIALAEVEKGELRPRRIFNLPRP"
     gene            complement(2914..3336)
                     /gene="rbfA"
                     /locus_tag="VIQ50_12020"
     CDS             complement(2914..3336)
                     /gene="rbfA"
                     /locus_tag="VIQ50_12020"
                     /inference="COORDINATES: protein motif:HMM:NF001802.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HEY9361154.1"
                     /translation="MTRRRHQRDPETSHMLSQRQLRVGELVRHAFADMLTRGAVHDPV
                     IQSHVITVPEVRMAADLRLATIYVVPLGGRDADAVLAALERNKRFLRGEIARRINLKF
                     APEVRFQLDERFDEAERIERLLRTPAVQRDLDDKDEDN"
     gene            complement(3436..6012)
                     /gene="infB"
                     /locus_tag="VIQ50_12025"
     CDS             complement(3436..6012)
                     /gene="infB"
                     /locus_tag="VIQ50_12025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HEY9361155.1"
                     /translation="MAETTEKAGEKKLSVTPSKTLSLKGRGVEQGVVRQSFSHGRTKA
                     VVVEKVKSRIPTRAKADAAKPATAGKRPAAPKAATAPPTMTTQTTPPPAAKPTGGMVL
                     RSLTEEEQKARVHALNDARLREAEQRKIAEEEAFVRTMREAAERTEREAAEARKVDEE
                     RRRKHDLETKLKAEQEAKKRFGEDAVLTARPSARPALEPDEEDVPRTRRGPGAARPAP
                     APKPTRSGVQKNRGRLTLVTALSADEERERSVAAFRRRVQRLKGHTADEPKEKLVREV
                     IIPETITIQELANRMAERSVDVIKLLMKQGHMAQINDVIDADTAQLLAEELGHTVKRV
                     AESDVEEGLFDVADDPSSLAPRPPVVTVMGHVDHGKTSLLDAIRSTDVAAGEAGGITQ
                     HIGAYQVTAPSGNKITFIDTPGHAAFSAMRARGARVTDIVVLVVAADDGVMPQTVEAI
                     NHAKAAKVPMIVAINKIDRPDAKPERVRTELLQHEVQVETLGGEVLDVEVSATKKLNI
                     DRLLETIGLQSEILDLKANPNRAAEGTVIEAKLDRGRGPVATVLVQRGTLRGGDLVVA
                     GAEWGRVRALVSDTGMPVEAAGPSTPVEVLGFNGTPEAGDRLAVVQSEARAREVTAYR
                     ARQRRDKMAARATGMRGSLEQMMSQLKTAGRKDLALIIKADVQGSLEAVIGAIEKLAT
                     DEVGARVIHSGVGGITESDVTLAEASGVPILGFNVRAHKEAREAAERVGIELRYYNVI
                     YDLVDDVKKAMSGLLAPTVRETMLGNATILEIFKVSKVGNVAGCRVTDGVVERGANVR
                     LIRDSVVVHEGKLSQLKRFKDDAREVIAGQECGMAFENYQDMKAGDVIECYRVETVQR
                     TL"
     gene            complement(6046..6735)
                     /locus_tag="VIQ50_12030"
     CDS             complement(6046..6735)
                     /locus_tag="VIQ50_12030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011470962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HEY9361156.1"
                     /translation="MLARLHDSALDGGTRKRAPGTQRFCAVTGAVRPVEELMRFVIAP
                     DGTAVPDLKRRLPGRGIWITATRQALRVAMARKTFARGFKREVRVASDLVETTERLIE
                     RAALDALAMCHKAGRVAIGFANVETALARAPIVAVLNAAEAAADGVRKLTAAVRRRAD
                     IAEIAVFDAFTSAQLDLALGRSNVVHAALLAGPESATFLARSARLERFRTGSLSEGAV
                     TASRPMHNVGT"
     gene            complement(6745..8355)
                     /gene="nusA"
                     /locus_tag="VIQ50_12035"
     CDS             complement(6745..8355)
                     /gene="nusA"
                     /locus_tag="VIQ50_12035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016840380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HEY9361157.1"
                     /translation="MAVSANRLELLQIADAVAREKAIDRGIVIAAMEDAIQKAARSRY
                     GSETEVRAEINPKTGEMRLARLLLVVDQVENEATQIALEDAKKRNPAAQVGDYIAEAL
                     PPLEYGRIAAQSAKQVIVQKVREAERDRQYQEYKDRISDIVNGIVKRVEYGNVVVDLG
                     RGEAIVRRDELLPRETFRNGDRIRAFIYDVRREPRGPQIFLSRTHPQFMAKLFAQEVP
                     EIYDGIVEVKAVARDPGSRAKIAVISRDSSVDPVGACVGMRGSRVQAVVNELQGEKID
                     IIPWTADPANFVVNALAPAEVAKVVLDEDRHRMEVVVPDQQLSLAIGRRGQNVRLASQ
                     LTGWDIDIVTEQEESEHRQAEFEKRTKLFIEALNVDEVVGQLLASEGFNSVEELAVVD
                     EKELAGIEGFDEETARELQARARDYLARQEAELDDKRKELGVEDALKEVPGVTTAMLV
                     KLGENDIKTVEDLAGCATDDLFGWSERKDGETVRYPGVLDEFDLSRDDTEALIMQARL
                     KAGWIKEEDLAPPPAEEDATAEATATSA"
     gene            complement(8359..9060)
                     /gene="rimP"
                     /locus_tag="VIQ50_12040"
     CDS             complement(8359..9060)
                     /gene="rimP"
                     /locus_tag="VIQ50_12040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016840382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HEY9361158.1"
                     /translation="MAPAIDTLEENGEPRLIAEQGIAARVAALSEPVLGGMGYRLVRV
                     KISGLDGCTVQIMAERPDGTMTVEDCETVSRALSPVLDVADPIDRAYRLEVSSPGLDR
                     PLVRRSDFQRFAGHRIKVEMAIAIDGRRRFRGVLLGVDGASARIRHDDAVPDQPDEVV
                     LPIEEMAEAKLVLTDALIAESLRRGKAAERAARRQQRQNAEHRAAGRRNSEARLNHVR
                     PTPVDDGDGGKNEGE"
     gene            complement(9315..>10037)
                     /gene="trmB"
                     /locus_tag="VIQ50_12045"
     CDS             complement(9315..>10037)
                     /gene="trmB"
                     /locus_tag="VIQ50_12045"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008176 - tRNA
                     (guanine(46)-N7)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HEY9361159.1"
                     /translation="QNPTKARRGAFFGRRKGHALRPHQAQLFETLLPRLAIDLATPAP
                     AELAALFPTSVDNVRLEIGFGGGEHMIAQAEQHARTGFIGVEPFVNGMAKALVAINTK
                     KLSNIRLHFDDATSLIEWLPAASLTCVDLIYPDPWPKRRHWKRRFIQDESVAAVARTL
                     GLGGEFRFATDIPDYAAWTLKHLTQSPALAWTAERADDWRRPWPGFSGTRYEAKAKRE
                     GRVPCYLTFRRTDDGLRHRDGY"
BASE COUNT         1638 a         3342 c         3108 g         1949 t
ORIGIN      
        1 aagcttgccg tgaccgattt cgcgccggcc gggcgaaccc atgcggccgg tctcgccgac
       61 cgagtagggc ggaaagttgt aatgcagcag gaaggtctcc ttgtaggtcc cctgcaaggc
      121 gtcgatccac tgctcatcct cccccgtgcc gagcgtcgct atcaccagcg cctgggtttc
      181 accgcgagtg aacagcgcgg agccgtgcgc gcgaggcagc actccgacct cgcaggcgat
      241 gggacgcacc gtcttcacgt cgcgaccatc gatgcgatga ccggtatcga gaatgttcaa
      301 gcgcacgatc ttggcttcga tctttttgaa aacgtcggcg acctgctgcg tggaataggg
      361 cgggttgtcc ccgccctccg ggcagaagtg cgccatcacc ttggccttgg cggaatcgac
      421 tgcctggtgg cgctccatct tgtgcgcaat cgcataggcc gcgcgcaaat ccggctcgac
      481 cagagcgagc atctcttttt ccagcgccga gatatccgca acccgcagct cgcgcggctc
      541 tttcgccgcc ttttctgcaa gcttgatgat ggcgtcgatc accggctgga aatggcggtg
      601 gccgaacatc acggccccga gcatcacctc ttcgctgagc tcctttgcct cggattcgac
      661 catcagcacg gcgtcctggg tgccggcgac cacgaggtcg agctggctct ccgtcatctc
      721 gtcgagcaag gggttgagca cgtattcgtt gttgacgaaa ccgacgcgag cggcgccgat
      781 cggccccatg aacggtgcac ccgaaagcgt cagcgccgcc gaggcggcga tcatcgccag
      841 aacatcggga tcgttctcaa gatcgtgcga tagcgtggtc acgatgatct gggtctcgtt
      901 gcgccagccg tcggcgaaca gcggtcgcac cggacggtcg atcaatcgcg agacgagcgt
      961 ctccttctcg gtggggcggc cttcgcgctt gaaatagccg ccaggaatgc ggcccgcggc
     1021 gtagaatttc tcctggtaat cgacggtgag cggcagaaaa tcgatgcctt cccgcggctc
     1081 cttcgcggcg accaccgtcg ccagcacctt tgattcccca taggtggcaa ctacggcacc
     1141 ctcagcttgt cgggcgatct tgccggtttc taggacgagc ttgcgccctc cccagtcgag
     1201 ttcaacacga tggatatcga acattgcagt cgtctttcat ggtatctgcg aaggggcgaa
     1261 agccatgagc aagacggcga gaagctgctg tctgcggcca tgccgcaaac cgagacagcg
     1321 tccagcgatc ctgccatggc cttcgagcct tccgttaaac gacgggcgat cattcggccc
     1381 gtcttcctag cccggcagcg acctcgctgc cggatgaaca gcggatttgt cccggtatcc
     1441 gcttcaaacg cgcgacatgc cgcgcagaat cgtcaacggc gaatccccag ccgttcgatc
     1501 aaggatttgt aacgggctgc gtcgacacgg gcgagatagt cgagaagctg ccgccgctgg
     1561 gacacgagct tgagcagtcc acgccgcgaa tgattgtcct tgacgtgggt cttgaaatgc
     1621 tcggtaaggc tgttgatgcg ctccgagagg atcgccacct gcacttccgg cgatccggta
     1681 tcgccggcct tgaccgcata ggtcttgatg acttcggcct tccggccggg cgttatcgac
     1741 atcggtgatt atccttttcc tgtgaggggc atacggcggc cgggccggga tgtcgtccag
     1801 cgcggtcgtc agaagtaggt tgcgcgggcc aatgcccgcg caaggggggc aataacgcaa
     1861 aatgcgctcc gacgccagcg gaaattgcgg cagctcgcac cgtcgccggg acgagccgcg
     1921 caccaggttt gaaggccttg tccagtcttc gtcccggcta tgggcgcggc agattgaaaa
     1981 tgcgccgcgg gcgcaattct cctttctcca cctccgccag ggcgatcagc gctccctgcg
     2041 aggagaccgc cacccagcct gccatgacgg gcgcatcacg cccgcgcagc agtaccgctt
     2101 gtccgcgcgt gagccgtccc gcgtcagagg tgctaacccg cagcgccggc aatgccgcca
     2161 gccccgcttc gacgggcagc agggctgcta gttccgcggc ggcagtttca tcagggcgcg
     2221 ggcgttgcaa tgcgtcaagg ctcacaccga catcctcgtc gaaggggcct accacggtac
     2281 ggcgcagggc cgcgacatgc cccaggcagc ccagcaagcg accgaggtcg cgggcgagcg
     2341 cgcgcacata agttcccttg ccgcactccg ccacgaactt tgcgtgatct tgatcagccg
     2401 tctcgatcag ttcgaggcga tgaatttcca ccgggcgtgc cgcgatttcc accgtctcgc
     2461 cgtcgcgagc gagatcgtac gcacgctcgc cgtcgacttt gaccgccgag aaccgcggcg
     2521 gcacctgggt gatttggccg acgaagcgcg gcaatgccgc cccgattgcg tccgcgctgg
     2581 cgcgttcggc gctcaggccg gtgatacggc cctcggcgtc gtcagtgtcg cgctcctccc
     2641 cccagcgcac ggtgaagtgg tagaccttgc gtccctccat gacgaaagaa acggttttgg
     2701 tcgcttcccc cagcgcgatc ggcaataccc cggaggcgag cggatcgagc gtgccggcat
     2761 ggccggcgcg cttcgcctgg aacagacgct tgaccacgct gaccgcatgc gtcgagctca
     2821 tgcctacagg cttgtcgagc acgacccagc cgtgcacgtc gcgcttctcg cgcttgcgcg
     2881 cctgcggcgg tgacggttca gtttcgaccc gcgtcaatta tcctcatcct tgtcgtcgag
     2941 gtcgcgctgc acggcgggcg ttcgcaacag cctttcgatc cgttcggcct cgtcgaaacg
     3001 ctcgtcgagc tggaatcgaa cctcgggcgc gaatttcaag ttgatgcgcc gcgcaatctc
     3061 gccgcgcaga aaacgcttat tgcgctcgag cgcggcgagc accgcgtccg catcacgtcc
     3121 gccgagcggc acgacgtaga tggtcgcgag ccgtaggtcg gccgccattc ggacctcagg
     3181 aacggtaatt acgtggcttt ggatcaccgg atcgtgcacc gcaccgcgcg tgagcatatc
     3241 cgcgaacgca tgacgcacga gttcgccaac ccgcagctgg cgctgcgaga gcatgtgact
     3301 cgtctcggga tcgcgctgat ggcgtcgacg cgtcatgatc gttctgaatg ctcttcatgc
     3361 ccggatcgat ccgtgcatcc aaacatcttg cgaaaaaatc gtcctggtga cgggctaagc
     3421 gcgcgagacc agagctcaga gcgtgcgttg caccgtctcc acccggtagc actcgatgac
     3481 gtcgccggcc ttcatgtcct gataattttc gaaggccatg ccgcactcct gtccggcaat
     3541 cacttcgcgc gcatcgtcct tgaagcgctt gagctgggaa agcttgccct cgtgcacgac
     3601 cacgctgtcg cggatgagac gtacattggc gccgcgctcc accactccgt cggtgacgcg
     3661 gcaaccggcc acatttccga ccttggaaac tttgaagatc tccaggatgg tcgcgttgcc
     3721 aagcatcgtt tcgcggacgg tcggcgccag caaaccggac atggcctttt tgacgtcgtc
     3781 cacgagatcg tagatgacgt tgtagtagcg cagctcgatg ccaacgcgtt cggcggcttc
     3841 gcgggcttcc ttgtgggcgc gcacgttgaa tccgaggatc ggcacgcccg aggcctccgc
     3901 cagcgtcacg tcggattccg tgatgccgcc gacgccggaa tgaatgaccc gtgccccgac
     3961 ttcgtcggtt gcgagcttct cgatggcgcc gatcaccgcc tccagcgaac cctgcacatc
     4021 ggccttgatg atcagcgcca gatccttgcg cccggccgtt ttgagctgac tcatcatctg
     4081 ttcgagcgag ccgcgcatcc cggtcgcgcg tgcagccatt ttgtcgcgcc gctgccgggc
     4141 acggtaggca gtgacttctc gcgcgcgcgc ctccgactgc acgactgcca atcgatcgcc
     4201 tgcctcgggg gtgccattga agccgagaac ttcgaccggc gtcgaaggtc ccgccgcttc
     4261 gaccggcatc ccggtgtcgg agaccagcgc gcgcactcgg ccccactcgg caccggcgac
     4321 gacgaggtcg ccgccgcgca acgtgccacg ctgcaccaac acggtcgcga ccggtccacg
     4381 gccgcggtcg agcttggctt cgatcacggt gccctcggcc gcccggttcg gattggcctt
     4441 cagatcgagg atttccgatt gtaggccgat cgtttccagc agtcggtcga tgttgagttt
     4501 cttggtcgcc gacacttcga catcgagcac ttcaccgccc aacgtttcga cctggacctc
     4561 gtgctgcagc aactcggtgc gcacccgttc cggcttggcg tcgggccgat caatcttgtt
     4621 gatcgcgacg atcatcggca ccttggcagc tttggcgtgg ttgatcgctt cgaccgtctg
     4681 cggcatgacg ccatcgtcgg cggcgaccac cagcaccaca atatcggtca ccctggcccc
     4741 acgggcgcgc atggcgctga aggcggcatg gccgggcgtg tcgatgaagg tgatcttgtt
     4801 gcccgatggc gcggtcacct ggtaggcgcc gatgtgctgg gtgatgccgc ccgcctcgcc
     4861 cgccgctacg tcggtcgaac gaatggcgtc gagcagcgaa gtcttgccgt ggtcgacgtg
     4921 acccatgacg gtgacgaccg gcggccgcgg tgccagcgag ctcgggtcat cggcgacgtc
     4981 gaacaagccc tcttcgacat ccgactcggc cacgcgtttg accgtatggc ccaattcctc
     5041 ggccaagagc tgggcggtat cggcgtcgat cacgtcattg atctgcgcca tatggccctg
     5101 cttcatgagt agcttgatca catccacgct gcgctcggcc atacggttgg cgagttcctg
     5161 gatggtgatg gtttccggaa tgatgacttc gcggacgagc ttctctttcg gttcgtcggc
     5221 ggtgtgcccc ttgagccgct gcacgcgacg gcgaaatgcc gccaccgatc gttcgcgctc
     5281 ttcatcggcg ctgagcgcgg taacgagtgt gagccggccg cgattcttct gtacgccgct
     5341 gcgcgtgggt ttgggcgccg gcgcgggtcg cgccgccccg ggaccgcggc gtgtgcgggg
     5401 gacgtcctcc tcgtcgggct cgagcgccgg ccgcgcgctg ggccgcgccg tcaggactgc
     5461 gtcctcgccg aaacgcttct tcgcctcctg ctcggccttg agcttggttt cgaggtcgtg
     5521 cttgcgccgc cgctcttcgt cgaccttgcg cgcttcggcc gcctcgcgct ctgttcgctc
     5581 ggcggcttcc cgcatggtgc ggacgaacgc ttcttcttca gcaatcttgc gctgttccgc
     5641 ttcgcgcagc cgggcgtcat tgagcgcgtg gacgcgcgcc ttctgctcct cctcggtcaa
     5701 gctccgcagc accatgccgc cggtcggttt ggcggcaggg ggaggtgtgg tctgggtcgt
     5761 catggtgggc ggtgctgtcg ctgccttcgg ggcggccgga cgcttgccgg ctgtggcagg
     5821 cttcgccgca tcggctttcg cgcgcgtcgg gatgcggctt ttcacctttt ccacgacgac
     5881 cgccttggtg cggccatggc tgaagctctg gcgcacgaca ccttgctcga cgccgcgccc
     5941 tttcaggctc aaggtcttgc tcggggtaac gctcagcttc ttttcgccag ctttttccgt
     6001 cgtttcagcc attccagtcc caattcctag ggcttgcgcc ccgtttcacg ttcctacgtt
     6061 gtgcatcggc cgacttgccg tgacggcgcc ttccgacagg gaacccgtcc ggaaacgctc
     6121 aagacgcgcg ctgcgcgcca gaaacgtcgc gctttcagga cccgcgagca gggctgcatg
     6181 taccacattt gaccgcccca atgccaaatc caattgcgcc gaggtaaatg catcgaagac
     6241 cgcgatttcc gcgatatccg cgcgccggcg aactgcggcc gtgagctttc gcacgccgtc
     6301 tgcggcggct tctgcagcat tgagaaccgc cacgatcggc gcacgagcga gcgccgtttc
     6361 aacgttggcg aagccgatcg cgaccctgcc cgccttgtga cacatcgcca gagcgtccag
     6421 cgcggcgcgt tcgatcaggc gctccgtcgt ctcgaccaga tcagaggcga cacgcacctc
     6481 acgtttgaag ccgcgcgcaa acgtcttgcg cgccatcgcg acacgcagcg cctgacgtgt
     6541 cgccgtgatc cagatgccac gtccgggcaa gcggcgcttg aggtctggca ccgcggtgcc
     6601 gtccggcgcg atgacgaaac gcatcagctc ctcgacaggc ctgactgctc ccgtgacggc
     6661 gcaaaatcgc tgcgtgccgg gcgcgcgctt gcgcgtcccg ccatcgagtg cgctatcgtg
     6721 cagtcgagca agcattcggt gtcctcaggc cgatgtcgcg gtcgcctcgg ccgtagcatc
     6781 ttcctcggca ggaggtggcg ccagatcctc ctccttgatc caacccgcct tgagccgcgc
     6841 ctgcatgatc agcgcttcgg tatcgtcgcg cgacagatca aactcatcga ggacgcccgg
     6901 atagcggacc gtctcgccgt ccttacgctc gctccatccg aagaggtcgt cggtggcgca
     6961 gcccgccaga tcttcgacag tcttgatgtc gttttcaccc aacttcacca gcatggcggt
     7021 ggtgacgccg gggacctctt tgagcgcatc ctcgacgccc agctctttgc gtttgtcatc
     7081 gagctcggcc tcctggcgag cgagatagtc gcgggcgcgt gcctgcaatt cacgcgcggt
     7141 ctcttcatcg aagccctcga tgccggcgag ttccttttcg tccaccacgg caagctcttc
     7201 caccgagttg aacccctcgg aagcaagcag ctggccgacg acttcgtcga cgttgagagc
     7261 ctcgatgaac agcttggtgc gtttctcgaa ctcggcctgc cggtgctccg attcttcctg
     7321 ctcggtgacg atgtcgatgt cccagccggt gagctgtgag gcgagccgaa cattctgtcc
     7381 gcgccggccg atggcaagtg agagctgctg gtcgggaacg accacttcca tccgatggcg
     7441 gtcctcgtcg agcacgacct tggcgacttc cgccggcgca agcgcattga ccacgaagtt
     7501 ggcggggtcg gcggtccacg ggatgatgtc gatcttctcc ccctgcagct cgttgaccac
     7561 ggcttgcacg cgagaaccgc gcatgccgac gcaggcccca accggatcaa ccgacgaatc
     7621 tcgggaaatt accgctattt tcgcgcgcga gcctgggtcg cgcgcgaccg cctttacctc
     7681 gacgattccg tcgtaaatct ccggcacttc ttgcgcgaac agcttggcca tgaattgcgg
     7741 gtgggtgcgt gacagaaaga tctgcggccc ccgcggctcc ctgcgcacgt cgtagatgaa
     7801 ggcgcggatc cggtcgccgt tgcggaaggt ctctcgcggc aacagttcgt cgcggcgcac
     7861 gattgcctcg ccgcggccga gatcgacaac gacattgccg tattcgacgc gcttgacgat
     7921 gccgttgacg atatcggaaa tgcgatcctt gtactcttga tattggcgat cgcgctcggc
     7981 ttcgcgaacc ttttgcacga tcacctgctt cgcagactgg gcggcgatgc ggccgtattc
     8041 gagcggcggc aaggcctcgg cgatgtagtc gccgacctga gcggcggggt tgcgcttttt
     8101 tgcatcttcg agcgcgatct gtgtcgcctc gttttcgacc tgatctacca ccagcagcag
     8161 gcgcgccagc cgcatctccc cggtcttcgg attgatctcg gcgcgcacct cggtctcgct
     8221 gccgtagcgc gagcgcgccg ccttctggat cgcatcctcc atggcggcaa tgacgatgcc
     8281 gcggtcgatc gccttctcgc gcgcgaccgc gtcagcgatt tgcaacaatt cgagccggtt
     8341 ggcgctcacg gccatcggtc attctccttc gttcttgccg ccgtccccgt catcgaccgg
     8401 ggttggccgg acatggttga gccgggcttc ggagtttcga cgccccgcgg ctcggtgctc
     8461 tgcattctgc ctctgctgcc gccgagcggc acgttccgca gccttgccgc gcctgagcga
     8521 ctcggcgatc aaggcgtcgg tgaggacgag cttggcctcc gccatttcct cgatcggcaa
     8581 cacaacctcg tctggttgat cgggcacggc atcatcgtgg cgaatacgcg ccgacgcgcc
     8641 gtctacaccc agtagcacgc cgcgaaaccg ccgacggccg tcgatggcaa tcgccatttc
     8701 gaccttgatg cggtggccgg cgaaacgctg aaaatcagag cgccgcacca gcggtcgatc
     8761 caatcccggc gaggacactt cgagccgata ggcgcgatcg atcggatccg ccacgtcaag
     8821 caccggcgag agcgcgcggg aaaccgtctc gcaatcctcg accgtcatgg tgccgtccgg
     8881 acgctcggcc ataatctgaa ccgtgcagcc gtcgagcccg gaaatcttga cgcgcacaag
     8941 gcggtatccc atgccgccga ggacaggttc gctgagggcg gctacgcgcg cggcgatgcc
     9001 ctgctccgcg ataaggcgtg gctcgccatt ttcctcgagc gtgtcgatcg ctggcgccat
     9061 tcgctttcgc cgtgcaacct ctcgtcagaa taccgtctcg gtgcgaccgg gcgcctcgcc
     9121 cgtttcggta acaaaaaaga gcgggtcccg gggggaaccc actctcaaaa accgaccgga
     9181 ctacatccga tcgctatgag acatccaaaa gcttggacgt aacaaatata gcaatttgcg
     9241 gcggccgcgc aagggccggc gggcgctctc ctcgattggc aactaacctt tcccccctta
     9301 gattctctcg tctatcagta gccatcccgg tgtcgaaggc cgtcgtccgt cctgcggaaa
     9361 gtcagatagc aaggcacgcg gccttcacgc tttgctttgg cttcgtagcg cgtccctgaa
     9421 aaacccggcc atggccggcg ccagtcgtcg gcgcgctcgg ccgtccacgc gagagcgggt
     9481 gattgggtca ggtgcttgag cgtccacgcc gcatagtccg ggatgtcggt tgcaaagcgg
     9541 aactcgccgc ccagtccaag ggtgcgtgca accgccgcga cgctctcgtc ctggataaag
     9601 cgtcgcttcc agtgccgtcg tttcggccat ggatcggggt agatcagatc gacgcacgta
     9661 agcgaggccg ccggcaacca ttcgatcaga gaggtcgcgt cgtcgaaatg cagacggatg
     9721 ttagacagct tcttcgtgtt gatcgcgacc agcgccttgg ccattccgtt gacgaacggt
     9781 tccacaccga tgaagccggt gcgtgcgtgc tgctcggcct gggcgatcat gtgttctccg
     9841 ccgccgaatc cgatctcgag gcggacgttg tcgaccgacg tggggaacag ggccgcaagc
     9901 tcggccggcg cgggcgtggc caaatcgatc gcaagccgcg gcagcaaggt ctcgaacaac
     9961 tgcgcctgat gcggccgcag cgcgtgaccc ttgcggcgcc caaaaaaagc gccgcgccga
    10021 gccttggtcg gattttg
//
LOCUS       DATCWM010000614         2222 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_371898, whole genome shotgun sequence.
ACCESSION   DATCWM010000614 DATCWM010000000
VERSION     DATCWM010000614.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2222
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_371898"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..670
                     /locus_tag="VIQ50_12050"
     CDS             <1..670
                     /locus_tag="VIQ50_12050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY9361160.1"
                     /translation="EIFHGAETAADPFRPGRNISGFRTGPLGMGHVVMHFERIAEVMA
                     FYQNVLEFKLSDYWLRPFPAYFLHVNPRHHSIAFVESGINMIHHMMVELYSFDDVGQG
                     YDLALGDPGRIGVTLGRHSGDYVTSFYTWNPSGFLVEYGWGGQLIDDSNWKPFERKFG
                     PSLWGHERRWMSAEKREESRRLCMEAAENGQRQPVQVIAGNYNRMTGVCPWWESMKQG
                     RKAG"
     gene            complement(758..1186)
                     /locus_tag="VIQ50_12055"
     CDS             complement(758..1186)
                     /locus_tag="VIQ50_12055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEY9361161.1"
                     /translation="MPLLPHKGALAIAAVIDIALNARGRPVAAKALATRHRLPPRHLE
                     PVLQALVRHGILKGTRGPRGGYELAREQRRITADDIVRASGAAEEMNGAPLANSALLS
                     KVVMPALGEAEHAFSTALARINVEDLAHSAAALRKSADEV"
     gene            complement(1220..1672)
                     /gene="dut"
                     /locus_tag="VIQ50_12060"
     CDS             complement(1220..1672)
                     /gene="dut"
                     /locus_tag="VIQ50_12060"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HEY9361162.1"
                     /translation="MRLPHAAGLALPAYQSAHAAGLDLIAAVPAAAPLVIPPGGRAAI
                     PTGLAFALPPGVEGQIRPRSGLALRHGVTVLNSPGTLDPDYRGEVHVILANFGTEPFP
                     VARGTRIAQLVVAATVRATIWEVSALDETTRGVGGFGSTGTGREERSD"
     gene            complement(1693..>2222)
                     /locus_tag="VIQ50_12065"
     CDS             complement(1693..>2222)
                     /locus_tag="VIQ50_12065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphopantothenoylcysteine decarboxylase"
                     /protein_id="HEY9361163.1"
                     /translation="AEVILISGPVQLPDPPGVEVVKVASAQDMLDAVNKALPADVAVF
                     AAAVADWRPAEAQSNKIKKGEGATPKLVLKENPDILATVAHDASRRPRLVIGFAAETD
                     RIIDHAKAKLARKGCDWILANDVSAESGVMGGDRNTVHLVTAQGVESWPQQSKEEVAR
                     TLVGRIAERLAGATR"
BASE COUNT          371 a          713 c          729 g          409 t
ORIGIN      
        1 cgaaatcttt catggcgcgg agaccgccgc cgatccgttc aggcctggac gcaacatttc
       61 cggcttccgc accggtccgc tcgggatggg tcacgtggtg atgcatttcg agcgcatcgc
      121 cgaggtgatg gcgttttatc agaacgtcct cgaattcaag ctcagcgatt attggctgcg
      181 accgtttccg gcgtatttcc tgcacgtcaa tccacgtcac cacagcatcg ccttcgtcga
      241 gagcggcatc aacatgatcc accacatgat ggtggagctc tacagcttcg atgacgtggg
      301 gcaaggctac gatctcgcgc tcggcgatcc cggacgcatc ggcgttacgc tcggacgcca
      361 ttccggcgac tacgtcacat cgttctacac ctggaatccg tctggctttt tagtcgagta
      421 cggctggggc ggccaactca tcgacgacag caactggaag ccgttcgagc gcaaatttgg
      481 tccaagcctc tggggtcatg aacggcgttg gatgtcggcg gaaaagaggg aggagtctcg
      541 ccggctgtgc atggaggccg ccgagaacgg tcaacggcag ccggttcagg tgatcgccgg
      601 caattacaat cgcatgactg gtgtctgccc ctggtgggag agcatgaaac aaggccgcaa
      661 ggccggctaa tttttccccc gcggctgtgt gctgttgtcg cgcgtgggcc tgccggtggc
      721 tcagttgtgg ggatgggtaa tttgccgtgc gagcgcccta gacctcgtcg gcggatttcc
      781 gcaacgcggc agcggaatgg gcgagatcct cgacattgat gcgcgccagt gcggtagaga
      841 aggcatgctc agcctctccc aacgcgggca tgaccacttt gctgagcagg gcggagttgg
      901 cgagcggcgc cccgttcatc tcttcggccg cgccggatgc gcgcacgata tcgtcggcgg
      961 tgatgcggcg ttgctcgcgc gcaagctcgt aaccgccgcg cggccctcgc gttcccttaa
     1021 gaatgccgtg gcgcaccagt gcctgcagca cgggttcgag atgccgcggc ggcaggcgat
     1081 ggcgcgttgc gagcgctttg gccgcgaccg ggcgcccgcg cgcgttgagc gcgatgtcga
     1141 tgacagcggc aatggccaag gcgcctttgt gcggcagaag gggcatggac gttccccagg
     1201 cgagaaacgg gtgccagaat caatcgctcc gctcttcccg tcccgtgccc gtagacccaa
     1261 aacccccaac tccgcgcgtt gtttcatcaa gagcggagac ttcccaaatt gtggcgcgta
     1321 cggtcgccgc cacgaccagt tgggcaatcc gcgtcccacg cgcgaccggg aacggctcgg
     1381 tgccgaaatt cgcaagaatt acatgcactt caccgcgata atcggggtcg agcgtgccgg
     1441 gcgaattgag taccgtgacg ccgtgccgca gcgcgagccc cgaacgcggc ctgatctggc
     1501 cctcgacccc cggcggcaag gcgaatgcaa gaccggtggg aatggcggcg cggccacccg
     1561 gggggatgac cagcggcgcg gccgcgggca cggcggcgat caggtcgagc ccggccgcat
     1621 gtgcgctctg ataggctggc agcgccaggc cggcggcgtg cggcagccgc atgatccgca
     1681 gtgcgacgat gctcaccgtg tcgctccggc gagcctttcg gcgatccgcc cgaccagcgt
     1741 gcgcgccacc tcctctttcg attgctgcgg ccaggattcc actccttgtg ccgtcaccag
     1801 gtggaccgtg ttgcggtcgc cgcccatgac gccgctctcg gccgagacgt cgttggcgag
     1861 gatccaatcg cagcccttgc gggcgagctt cgccttggcg tggtcgatga tccgatcggt
     1921 ctcagcggca aagccaatga cgaggcgtgg acgcctgctc gcgtcgtgcg ccacggtcgc
     1981 gaggatgtcg ggattttctt tgagcacgag tttcggcgtt gcgccctcgc ccttcttgat
     2041 cttgttcgat tgcgcctcgg ccgggcgcca gtcggccacc gccgccgcga acactgcgac
     2101 atctgcaggc agcgccttgt tcaccgcgtc caacatgtcc tgcgcactgg cgaccttgac
     2161 gacctcgacc cctggcggat cgggcagttg gaccggccca gagatcaaga tcacctcggc
     2221 ac
//
LOCUS       DATCWM010000615         2343 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_301288, whole genome shotgun sequence.
ACCESSION   DATCWM010000615 DATCWM010000000
VERSION     DATCWM010000615.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2343
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_301288"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(35..694)
                     /gene="msrA"
                     /locus_tag="VIQ50_12070"
     CDS             complement(35..694)
                     /gene="msrA"
                     /locus_tag="VIQ50_12070"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HEY9361164.1"
                     /translation="MLMFKKKPEMPSPAEALPGRPTPIPTAREHFIFRRPLKGPYPAG
                     FEMAMFGMGCFWGAERKFWELGDGIYITAVGYAGGHTPNPTYQEVCTGRTGHNEVVLV
                     VYDPAKISYERLLKTFWENHDPTQGMRQGNDVGTQYRSGIYAFTPEQRRAAEASKAMY
                     GKELKARQFGAITTEVLDAPPFYFAEDYHQQYLSKNPMGYCGLGGTGVSCPVGLAAAQ
                     T"
     gene            complement(736..1059)
                     /locus_tag="VIQ50_12075"
     CDS             complement(736..1059)
                     /locus_tag="VIQ50_12075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361165.1"
                     /translation="MIRFVLRFLGLLALALGFIFLVYDGTKSIADQTVYISSVESTWS
                     NIHQSSLTALQPEVERRAGAWVWEGLVKPYFLDQPVSLVLAVIGAILILLGRKKKPLI
                     GYARD"
     gene            1232..>2343
                     /locus_tag="VIQ50_12080"
     CDS             1232..>2343
                     /locus_tag="VIQ50_12080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015314164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malic enzyme-like NAD(P)-binding protein"
                     /protein_id="HEY9361166.1"
                     /translation="MSAKQDGRGIRPTFTDEEALLFHSQGRPGKLEVVATKPMATQRD
                     LSLAYSPGVAVPVLAIAEDEDRAFDYTTKGNFVAVITNGTAILGLGNRGALAAKPVME
                     GKAVLFKRFADIDSIDLEVASEDPDEIINCVKLLGKSWGGINLEDIRAPECFVIEHRL
                     RELLDIPVFHDDQHGTAIIAAAGLINALDLTGRDIKSTKLVCNGAGAAGIACLELLKA
                     IGFTPNNIILCDTKGVIYQGRTEGMNQWKSAHAAKTSTRTLAEALAGADVFFGLSVKG
                     AVTKEMVKSMAAKPIIFAMANPDPEITAEEVAEVRSDAIMATGRSDYPNQINNVLGFP
                     YIFRGALDVRARAINMEMKIAAAQALAELAREDVPD"
BASE COUNT          452 a          755 c          712 g          424 t
ORIGIN      
        1 cgttccagcg gcagcggttt aggcgtaacg ccgattacgt ttgcgccgcg gcgaggccga
       61 ccgggcagct cacgcccgtg ccgccgaggc cgcaatagcc catcgggttc ttcgacagat
      121 attgctggtg atagtcctcg gcaaaataga atgggggcgc atcgagcact tcggtggtga
      181 tcgcaccgaa ctgtcgcgcc tttagttcct tgccgtacat cgctttcgag gcctccgcgg
      241 cccggcgctg ctcgggggtg aaggcataga tcccggaacg atactgcgtc cccacgtcgt
      301 tgccctggcg catcccttgg gtcggatcgt gattctccca gaaggttttg agcaaccgct
      361 cgtaggaaat cttcgcggga tcatagacca ccagcaccac ctcgttgtgc ccggtgcggc
      421 cggtgcacac ctcttggtag gtcgggttgg gcgtatggcc gcccgcgtag ccgacggcgg
      481 tgatgtaaat gccatcgccc aattcccaaa acttgcgctc ggcgccccag aagcaaccca
      541 tgccgaacat cgccatctcg aagcccgccg ggtacggccc cttgagcggc cggcgaaaga
      601 tgaaatgctc ccgcgccgtc ggaattggcg tcggacggcc gggcagcgcc tcggcgggtg
      661 acggcatttc gggctttttc ttgaacatca gcatggcagc gcctccgcta ctcgcaggct
      721 agatatagga gcgcgttagt cccgcgcgta tccgatcagc ggctttttct ttcgtcccag
      781 caggatcagg atggcgccga tgacggcgag cacgagcgaa accggctggt cgagaaagta
      841 aggcttgacc aagccttccc agacccaggc cccggcgcgc cgttcgacct ccggctgcag
      901 cgccgtgagc gagctctggt ggatgttcga ccaggtggat tcaacgctgc tgatatacac
      961 cgtctggtcc gcgatcgact tggtgccgtc gtagaccaaa aagatgaatc ccaacgcgag
     1021 cgccaacagg ccgaggaacc gtagaacaaa gcggatcatg aggtcttacg cgcaaacaca
     1081 cccatcgccc ctctaccgat taacccgcct tcccattcgc ttcaatccgg gaacaagccg
     1141 ccggaggcgt ttcccgactt gccttgagcg aagcccgtgc gatccgctac cttcggctct
     1201 ccggccatca cggcttttgt aaggggttga gatgtctgcg aaacaggatg gccgcgggat
     1261 acgaccgaca tttaccgacg aggaagccct gctgttccac agccagggcc ggccgggcaa
     1321 gctggaagtg gtggccacca agcccatggc cacccagcgt gacctgtcgc tggcctattc
     1381 gcccggcgtc gcggtgccgg tgctggccat cgccgaggat gaggatcgtg ccttcgatta
     1441 caccaccaag ggcaatttcg tcgccgttat caccaacggc accgccatcc tggggcttgg
     1501 caatcgcggc gcgctggcgg ccaagcccgt catggaaggc aaggcggtgc tgttcaagcg
     1561 cttcgccgat atcgattcca tcgatctcga ggtggcctcc gaagacccgg acgagatcat
     1621 caattgcgtc aagctgttgg gcaagagctg gggcggcatc aacctcgagg atattcgcgc
     1681 gccggaatgc ttcgtgatcg agcaccggct gcgggagctc ttggatatcc cggtgttcca
     1741 tgacgaccag cacgggaccg cgatcattgc cgcggccggc ttgatcaatg ccctcgatct
     1801 caccggccgc gatatcaaat cgaccaagct cgtgtgcaac ggggccggcg ccgccggcat
     1861 cgcctgcctc gaactgctca aggccatcgg cttcacgccc aacaacatca tcctctgcga
     1921 caccaaaggc gtcatctatc aaggccgtac cgaaggcatg aatcagtgga agtcggccca
     1981 tgcagcgaaa acctccaccc gcacgctggc cgaggcgctg gcgggcgctg acgtcttctt
     2041 cggcctctcg gtgaagggcg cggtgaccaa agagatggtg aaatcgatgg cggccaagcc
     2101 gatcatcttc gccatggcca atcccgatcc ggagattacc gccgaggaag tggcggaggt
     2161 ccgcagcgac gccatcatgg cgaccggacg ttccgactat cccaatcaga tcaacaacgt
     2221 gctcggcttc ccctacatct tccgcggtgc tctcgacgtg cgcgcacggg cgatcaacat
     2281 ggagatgaag atcgccgccg cgcaggcgct ggcggagctc gcgcgcgagg acgttcccga
     2341 cga
//
LOCUS       DATCWM010000616         2031 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_392881, whole genome shotgun sequence.
ACCESSION   DATCWM010000616 DATCWM010000000
VERSION     DATCWM010000616.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2031
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_392881"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..643)
                     /locus_tag="VIQ50_12085"
     CDS             complement(<1..643)
                     /locus_tag="VIQ50_12085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HEY9361167.1"
                     /translation="MAIERYNAREAEARWQKVWDERGIFVTRNDDPRQKYYVLEMFPY
                     PSGRIHMGHVRNYTMGDVVARFKRAMGLNVLHPMGWDAFGMPAENAAMERKVHPKAWT
                     YQNIAAMKAQLKSMGLSLDWAREIATCDPAYYKHQQKMFLDFLHAGLVERKLGKVNWD
                     PVDQTVLANEQVIDGRGWRSGALVEQREMPQWYFRITKFSEDLLQALDRLDRWP"
     gene            911..1996
                     /gene="ada"
                     /locus_tag="VIQ50_12090"
     CDS             911..1996
                     /gene="ada"
                     /locus_tag="VIQ50_12090"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008838664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-binding transcriptional
                     regulator/O6-methylguanine-DNA methyltransferase Ada"
                     /protein_id="HEY9361168.1"
                     /translation="MSLLMRVNERPAPSSLDDASCWSAVERRDRAADGTFVYSVRTTG
                     VYCRPSCAARLPRRENVMFHVSCAEAERAGFRPCKRCRPNAPALAEAHATVVARACRL
                     IEQAEEPPTLDDLAQAAGMSRFHFHRVFKAVTGVTPKAYIAGDRAKRVREELASRDTV
                     TQAIYGAGFNSNGRFYAAAPGLLGMTPTQFRSGGTGNVIRFAVGQCSLGAILVAATDK
                     GVCAIEFGDDPEALVRALQDRFPKAQLLGGDEAFERLVAKVVGFVEAPAQGLDLPLDI
                     RGTAFQQRVWKAIRDIPAGATASYRDLAKRLGAPKAVRAVAQACAANDIAVAIPCHRV
                     VRTDGSISGYRWGVVRKRALLAREKAA"
BASE COUNT          330 a          659 c          673 g          369 t
ORIGIN      
        1 cgggccagcg gtcgagccga tcgagggctt gcagcaaatc ctcggaaaat ttggtgatgc
       61 ggaaatacca ttgcggcatt tcgcgctgct cgaccagcgc gcccgagcgc cagccgcgcc
      121 cgtcgatcac ctgttcatta gcgagcacgg tctggtcgac cggatcccag ttcaccttgc
      181 cgagcttgcg ctcgaccagc cccgcgtgga ggaagtcgag aaacatcttt tgctggtgct
      241 tgtaataggc gggatcgcag gtcgcgatct cgcgcgccca gtcgagcgaa agccccatgg
      301 atttgagctg cgccttcatc gcggcgatgt tctgataggt ccacgccttg gggtggacct
      361 tgcgctccat ggccgcgttc tcggccggca tgccgaaggc gtcccatccc atgggatgca
      421 gcacgttcag ccccatggcg cgtttgaagc gcgcgaccac gtcgcccatc gtgtagttgc
      481 gcacgtgtcc catgtggatg cgcccggacg gatacgggaa catctcgagc acgtagtatt
      541 tctggcgcgg atcgtcgttg cgggtgacga agatgccgcg ctcgtcccac accttttgcc
      601 agcgggcctc cgcctcgcga gcgttgtagc gttcgatggc catggaatga gtatgcctgg
      661 caaatactta ccaaggcact aggccagcag ggccgcctcg gtcaaccgtc accggcaggc
      721 acggctgttc gaatatggtg ccgtaatagg cctttgccat cgcgcagctc ctcctttcaa
      781 tctcgcggaa accgggtggc gcgcctatct ctgatttgaa agcaaggagc ggagtgcttg
      841 cgctgctgca atccatagat tgccaggcga ggcggcattg atccgccgcg aacctgatgg
      901 agcaagatcc atgtccttgt tgatgcgagt caacgagagg ccggcgccgt cctcgctcga
      961 tgacgccagc tgctggagcg ctgtggaacg gcgcgatcgc gcggccgacg gcacgttcgt
     1021 ttactccgtg cgcacgaccg gcgtctattg ccggccctcg tgcgcggcgc gcctgccgcg
     1081 gcgagagaac gtgatgttcc atgtgagctg cgccgaagcc gagcgtgccg ggtttcggcc
     1141 atgcaaacgc tgccggccca acgcgcctgc gctcgccgag gcgcacgcaa ccgtggtcgc
     1201 ccgtgcgtgc cggctgatcg aacaggcgga ggagccgccg acgctcgatg acttggcgca
     1261 ggcggccggc atgagccgtt tccacttcca ccgcgtgttc aaagcggtca ccggcgtgac
     1321 gcccaaggcc tatattgccg gcgatcgcgc caagcgcgtg cgcgaggagc tcgcgtcgcg
     1381 cgacaccgtc acacaagcga tctatggcgc cggcttcaac tccaacggcc ggttctacgc
     1441 cgccgcgccc ggtctgctcg gtatgacgcc gacgcagttc cgcagcggtg gcaccggcaa
     1501 cgtcattcgc tttgccgtcg gccaatgctc gctcggtgcg atcctggtcg cggcgacgga
     1561 caaaggcgtg tgcgccatcg agttcggcga tgatcccgag gcgttggtgc gcgcgctgca
     1621 agaccgcttt cccaaggcgc agctgctcgg cggcgatgaa gcgttcgagc ggctcgtggc
     1681 caaggtcgtc ggcttcgtcg aggcgccggc gcagggcctc gatctcccgc tcgacatccg
     1741 cggcaccgcg ttccaacagc gggtgtggaa ggcaattcgc gacatcccgg caggggcgac
     1801 ggcaagctac cgggatctcg cgaagcggct cggagcgccg aaagccgttc gcgcggtggc
     1861 acaagcttgc gccgcgaatg acatcgccgt cgccattcct tgccaccggg tggtgcgcac
     1921 cgatggatcg atctcggggt atcgctgggg cgttgtgcgc aagcgcgctt tgctggcacg
     1981 ggagaaggcg gcatgacccg gtctcttgcc gccgagcgcc agtctgcgcc t
//
LOCUS       DATCWM010000617         2426 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_177747, whole genome shotgun sequence.
ACCESSION   DATCWM010000617 DATCWM010000000
VERSION     DATCWM010000617.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2426
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177747"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            16..561
                     /gene="msrA"
                     /locus_tag="VIQ50_12095"
     CDS             16..561
                     /gene="msrA"
                     /locus_tag="VIQ50_12095"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HEY9361169.1"
                     /translation="MGQGTEPQRSAIATFAGGCFWCVESDFDKVDGVISTTSGYTGGH
                     TVNPSYEQVSHGGTGHAEAVEIAYDPAKVSYKKLLDVFWHNIDPLAKDRQFCDHGDQY
                     RSAIFYHDEEQRALAEASKAAVAKRFEQPVATQIVPAGAFYKAEEYHQDYYKKNPIRY
                     KFYRFNCGRDARLEELWGKKD"
     gene            564..1058
                     /gene="msrB"
                     /locus_tag="VIQ50_12100"
     CDS             564..1058
                     /gene="msrB"
                     /locus_tag="VIQ50_12100"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008963694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEY9361170.1"
                     /translation="MLDRRVLLTGAGAFALIAALRWLQSGEIEAADAFEIQKSDSEWR
                     AILSKPQYDVLRLRRTEAPGSSPLNEEKRKGTFVCAGCDLALFSSETKFDSKTGWPSF
                     YRPLPNAIGTSTDHLLLLPRTEVHCRRCGGHLGHVFDDGPPPSGLRYCMNGIALKFIP
                     DAPA"
     gene            1103..2104
                     /locus_tag="VIQ50_12105"
     CDS             1103..2104
                     /locus_tag="VIQ50_12105"
                     /inference="COORDINATES: protein motif:HMM:NF015277.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate decarboxylase"
                     /protein_id="HEY9361171.1"
                     /translation="MVRPITRRVLALVLFAAAAAPVRASEVYQISTISSLLAGGYDGD
                     TTVGELIRHGGFGLGTFNGVDGEMMVVDGEVFRGTIDGRAHVVAPSELTPFAVVVPLR
                     PQGSVPIAAGQSLEQLEAALDALPYSASRVLAARVEGRFRAVAIRSEPKQQPPYRPLA
                     DVMKAQQVVHTVVEVDGILIGFRFPAAASSVNVPGWHFHFLSADKTRGGHVLSLTTGA
                     TVASLRGIHRSTHPLPGAGASGQRERGGDRGGRARAIDTQAARASPAAGAVLFASREN
                     RGFLAIPLLSAIARLDISSPREQGVRLFTGLQCLRKKTAARYRIKRGPIDLPTKSLS"
     gene            2026..>2426
                     /gene="dksA"
                     /locus_tag="VIQ50_12110"
     CDS             2026..>2426
                     /gene="dksA"
                     /locus_tag="VIQ50_12110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013913258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019899 - enzyme binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HEY9361172.1"
                     /translation="MSPQKNGGAVQDKTRPYRPSDKEPFMNERQREYFRQKLTAWKEE
                     ILKEARETLAHLQAENENHPDLADRASSETDRAIELRARDRQRKLIAKIDAALTRLDD
                     GTYGYCEETGEPISLKRLEARPIATLSVEAQ"
BASE COUNT          429 a          771 c          810 g          416 t
ORIGIN      
        1 gccctcgcgg gcgccatggg gcaggggacc gagccgcagc ggagcgccat cgcgaccttc
       61 gccggaggct gcttctggtg cgtggaatcg gatttcgaca aggtcgacgg cgtgatcagc
      121 accacctccg gctataccgg cgggcacacc gtcaatccca gctacgagca ggtgtcgcac
      181 ggcggcaccg gccatgccga ggccgtggag atcgcgtatg atccggccaa ggttagctat
      241 aagaagctgc tcgacgtgtt ctggcacaac atcgatccgc tggcgaagga tcggcagttc
      301 tgcgatcacg gcgaccaata ccgcagcgcg atcttctatc acgatgagga gcagcgggcg
      361 ctggcggagg cctcgaaggc cgcggtcgcg aagcgcttcg agcagccggt tgcgacgcag
      421 atcgtgcccg ccggagcgtt ctacaaagcc gaagagtacc accaggacta ctacaagaag
      481 aacccgatcc gctacaaatt ctaccgcttc aactgcggac gcgatgcgcg actcgaggag
      541 ttgtggggca agaaggacta gccatgctcg atcggcgtgt tttgctcaca ggtgccgggg
      601 cgttcgcgct gatcgcggcg ctgcgttggc tgcagtccgg cgagatcgag gccgccgacg
      661 cgttcgaaat ccagaagagc gacagcgagt ggcgcgcgat tctcagcaag ccgcaatacg
      721 acgtgttgcg cctgcgccga accgaggctc ccggctcgag cccgctcaac gaggagaagc
      781 gcaagggcac tttcgtgtgc gcgggttgcg accttgccct gttctcgtcg gagacgaagt
      841 tcgacagtaa gaccggctgg ccgagcttct atcgcccgct gccgaacgcg atcggcacct
      901 ccaccgacca cctgctgcta ttgccgcgca ccgaggtgca ttgccggcgc tgcggcgggc
      961 acctgggcca cgtcttcgat gacggcccgc cgccgtccgg gctgcgctac tgcatgaacg
     1021 gcatcgcctt gaagtttatt cctgacgcgc cagcgtgagc gcggctcgca tccaacgccg
     1081 gccaaccccg aaggagctca cgatggttcg tccgatcacg cggcgcgtgc tggcgctcgt
     1141 cctgttcgca gctgccgcgg cgccggtgcg tgcctccgag gtctaccaga tctccaccat
     1201 ctcgagcctg ctggccggcg gctatgacgg cgataccacc gtcggtgagc tgatccggca
     1261 cggcgggttc gggttgggaa ctttcaatgg cgtcgatgga gagatgatgg tggttgatgg
     1321 ggaggtcttc cgcggcacga tcgacggccg ggcgcatgtg gttgccccct ctgagctgac
     1381 gccattcgcc gttgttgtcc cgttgcgccc gcaaggatcg gtgccgatcg ccgccgggca
     1441 atcgctcgag cagctggagg cggcgctcga tgccttgccc tacagcgcat cgcgggtgct
     1501 ggcggcgcgg gtggaggggc ggtttcgcgc cgtcgcgatt cgcagcgagc ccaagcagca
     1561 gccgccttat cgcccgttgg cggatgtcat gaaagcgcaa caggtggtcc atacagtcgt
     1621 tgaggtcgac ggtatcctga tcggcttccg tttccccgcc gcggccagct cggtcaacgt
     1681 gccaggttgg catttccatt ttctcagtgc ggataagacg cgcgggggcc atgtgctgag
     1741 cctcaccacc ggtgctaccg tggcctcgct ccgaggaatt caccgatcta cgcatccgct
     1801 tcccggcgcg ggcgccagcg ggcagcgcga gcgcggaggc gatcggggcg gtcgagcgcg
     1861 cgcaatagac acccaggctg cgcgggcgtc cccggccgca ggtgcggttc tttttgcatc
     1921 gcgggaaaat agggggttcc tcgcaattcc gttattgtcg gccatcgcgc ggctcgatat
     1981 aagctcgccc cgcgagcagg gggttcgcct tttcacgggg ttgcaatgtc tccgcaaaaa
     2041 aacggcggcg cggtacagga taaaacgagg ccctatcgac cttccgacaa agagcctttc
     2101 atgaatgagc ggcagcggga gtatttccgc cagaagctca ccgcgtggaa ggaggaaatc
     2161 ctcaaggagg cgagggagac gctcgcccat ctccaagcag agaacgagaa tcatcccgat
     2221 cttgccgacc gcgcatcctc ggagactgat cgggcgattg agttgcgggc gcgcgaccgc
     2281 cagcgcaaac tgatcgccaa gatcgatgcg gcgctcactc gcctcgacga cggcacctac
     2341 ggctattgcg aggagaccgg cgagccgatc tcgctcaagc ggctcgaggc gcggcccatc
     2401 gccacgctct cggtcgaggc gcagga
//
LOCUS       DATCWM010000618        10792 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_258498, whole genome shotgun sequence.
ACCESSION   DATCWM010000618 DATCWM010000000
VERSION     DATCWM010000618.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10792
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_258498"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            188..379
                     /locus_tag="VIQ50_12115"
     CDS             188..379
                     /locus_tag="VIQ50_12115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361173.1"
                     /translation="MSSNNIYRNNAEDCLRMAQTVVNDGDRPFWLTLAQSWLRLAERA
                     ARGRSETDTQSPPVGSENR"
     gene            complement(447..1979)
                     /locus_tag="VIQ50_12120"
     CDS             complement(447..1979)
                     /locus_tag="VIQ50_12120"
                     /EC_number="6.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007563612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA carboxylase subunit beta"
                     /protein_id="HEY9361174.1"
                     /translation="MKDILEKLEERRARARAGGGEARIEAQHKRGKLTARERLELLMD
                     KGSFEEFDMFVEHRSAEFGMEKSRIPGDGVVTGWGTVNGRTVFAFAKDFTVFGGSLSE
                     AHAQKIVKIQDMAMKARAPIIGLFDAGGARIQEGVAALGGYGEVFKRNVIASGVIPQI
                     SVIMGPCAGGDVYSPAMTDFVFMVRDTSYMFVTGPDVVKTVTNEVVTAEELGGAGVHT
                     TKSGIADGSYENDVECLLQMRRLLDFLPANNEAGVPELPSRDDVEREEKSLDTLVPDN
                     PNKPYDIKELLLKVVDEGDFFELQEAFAKNIVTGFGRIAGRSVGFVANQPMVLAGVLD
                     IDASRKAARFVRFCNAFGIPIVTFVDVPGFLPGTNQEYGALIAHGAKLLFAYSQATVP
                     LVTVITRKAFGGAYDVMASKHIGGDVNYAWPTAQIAVMGAKGAVEIIFRADMGDAKKI
                     AARTKEYEDRFLSPFVAAERGYIDDVIMPRATRARIAKALAMLRGKRVEMPERKHDNL
                     PL"
     gene            2076..2555
                     /locus_tag="VIQ50_12125"
     CDS             2076..2555
                     /locus_tag="VIQ50_12125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361175.1"
                     /translation="MPQGFRYKALCYSSAALLLATAAAVAPAIAQFPPAAEDQPAAKG
                     KKGAATGSTSLNGNWSGELTQVGSQTPYKFELAINAKGVETKYPDLDCTGKLTRVGSS
                     KSYTFYVENITKGQVDKGGRCPDGTVTLARQGNDLALGWFGSVQGTTVIAYGTLKKQ"
     gene            complement(2572..3345)
                     /locus_tag="VIQ50_12130"
     CDS             complement(2572..3345)
                     /locus_tag="VIQ50_12130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0043461 - proton-transporting ATP synthase
                     complex assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP12 family protein"
                     /protein_id="HEY9361176.1"
                     /translation="MRDLFEGIFDEEPRDPTQAARRAMRPQLRRRFYERVEIGDAEEE
                     FPIVLDGHPVKTPARRTLAAPSRALAQHLAAEWEAQREAIDPAKMPLTRLANTIIDGV
                     IDATAAVAAEVERYLACDLLFYRAPGPAGLVMWQAKAWDPVLAWAREAMGARFVLAEG
                     IAFVAQPAQALAAASSAIPSDPWRLGAVHTITTLTGSALIAIALAHAAVSVDAAWSAA
                     HVDEDWNMEFWGRDAIALERRAARFAEMQAAATVLEAVK"
     gene            3459..4457
                     /locus_tag="VIQ50_12135"
     CDS             3459..4457
                     /locus_tag="VIQ50_12135"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEY9361177.1"
                     /translation="MKVGVFDHLDRNDRPLDAFYEERLKIVEAYDRGGFYAYHTAEHH
                     ATPLGLAASPSVFLAAVAQRTQRLRFGPLVYTLPPHHPLRVVEEICMLDQLSRGRFEL
                     GVGRGISPIETAYYGINPDHRQKMYLEALQILRQALTQRTLTFHGEFYRYVDVPIELE
                     PFQKPHPPFWAGTATPDGAETAARNGFNLVANALTSQIRTLTDCYRAAFKGMHTPMLG
                     LARFVIMADTDAEALAIARRAYPLWHRHFHHLFRMHGTSPAGGDRPAHFDQIKDGDRG
                     IAGSPATVARMIRAQMQEAGTNYFVAQFAFGDLTLGEVLRTVDLFAREVMPALRDT"
     gene            4874..6628
                     /locus_tag="VIQ50_12140"
     CDS             4874..6628
                     /locus_tag="VIQ50_12140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY9361178.1"
                     /translation="MKPTDISTPDYFHKVVDCQWACPAHTPVPEYIRLIAAGRYSDAY
                     MINWKSNVFPGILGRTCDRPCEPACRRVRVENEPVAICRLKRVAADFKDDIRGRLPRP
                     AAVKNGKRIALVGGGPASLTVARDLAPLGYHCVVFDQDPKPGGMIRTQIPRFRLPESI
                     IDEECDYILNLGIEFRGDKRIDSLKALLAEGWDAVFVGCGAPRGRDLDVPGRKEAAAN
                     IHIGIDWLSSVSFGHINKIGKRVIVLGGEDVKVIVRSGFEEMKASPWEKEDAMHEDIP
                     ILNFLVPKEFTHENGRLTGVVFEKVKAEYDTKGRRNLVPTGEPDQHFPCDDVLVAVGQ
                     ENAFPWIERDSGIEFDKWNMPKVDPKTMASSHPRVFFGGDAAFGPKNIIWAVAHGHDA
                     ALSIDKLCSGSDVNDRPMPMVEIVSQKMGIHEWSYDNDIAPDRRYRVPLRDKVVALRD
                     IKTEVELGYDPDLALREAHRCLNCDVQTVFTSSLCIECDACVDICPMDCITFTPNGEE
                     ADLRTRLRAPAKNVTQDLYVANDLKTGRVMVKDEDVCLHCGLCAERCPTGAWDMKKYL
                     IDMTHANDQCRVAARSAA"
     gene            6598..8445
                     /locus_tag="VIQ50_12145"
     CDS             6598..8445
                     /locus_tag="VIQ50_12145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HEY9361179.1"
                     /translation="MPSSSPISSVNDFVVRFANVNGSGSASANELFARSVLRMGVPVA
                     PRNIFPSNIQGLPTWYEVRISEAGHLGARGGTDLMVAMNPQTWEKDVAGIEPGGYLLY
                     DSTKPMPKSKFREDITVIGVPLTAICNREYSDPRQRQLFKNIMYLGALCALLDMDVAA
                     VEQLVREQFKSKEKLIDANLHALHLGRDWALQNLQCPIGLRVRHAKTVGDRIFVEGNS
                     AAALGAVYGGATVCAWYPITPSSSLADAFTSHCRRLRVDAGNKRNKFAIIQAEDELAS
                     IGMVIGAAWNGARAFTATSGPGISLMQEFLGLAYFAEIPAVIFDVQRAGPSTGMPTRT
                     QQCDLISCAYASHGDTKHVLLLPEDPAEAFDFAADAFDLADRLQTPIFVMLDLDIGMN
                     HRLCRPLTWDDGRKYDRGKVMTAADLEAGKDFGRYLDVDGDGIPYRTYPGTHPSKGSF
                     FTRGTSRDRYARYTEEGAPYADNMQRLLRKFETAKDLVPRPLQANAAKPTKYGVIYYG
                     STSPAMDEAIHMIEARGHLLNRLRLRAFPFHSSVTSFVADHDFVFIVEQNRDGQLRSL
                     IVNECSIDPVRLVPILHYDGTPITARFITRAIADHLDALKVTPLRKAVS"
     gene            8486..9541
                     /locus_tag="VIQ50_12150"
     CDS             8486..9541
                     /locus_tag="VIQ50_12150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015664952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HEY9361180.1"
                     /translation="MTYITKPKFHHPALPKNALGYTHRDYEGSVSTLCAGCGHDSISG
                     AIIDACFQLDIEPHRVAKLSGIGCSSKTPTYFLGNSHGFNSVHGRMPSVLTGANLANR
                     DLIYLGVSGDGDSASIGLGQFAHALRRGVNMVYVVENNGVYGLTKGQFSATADRGSKS
                     KRGITNTDNSIDLVAMALQLGATFVARSFSGDKEQMVPLIKAAIEHEGAAFIDIISPC
                     VAFNNHLGSTKSFDYVREHNEAVNRLDFMTGRAPITVAYEPGSVEVVEQHDGSKLVLK
                     KVAADYDPHDRLGAVNFLQRHAAAGQVVTGLLYVEPEPEDLHRNFNTVEGPLNALAEP
                     DLCPGSAMLEKINTSLR"
     gene            complement(9578..10108)
                     /locus_tag="VIQ50_12155"
     CDS             complement(9578..10108)
                     /locus_tag="VIQ50_12155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011090096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEY9361181.1"
                     /translation="MNEPRFVPKTVYVIYIAGTPEKVWEALTSAEFTRQYFFGRTVEL
                     EPQIGGNFVLRMPDGRLDIKGRVTAWDPPRRLSVTWAVDFEEFRELPESLVTYDIEPM
                     GESVKLTVTEAFQWDVPDAILAGGRQGWPFILSSLKSVLETGRPIAISVKMGPPKGML
                     EAIKEAVAKKPWRAAG"
     gene            complement(10223..10735)
                     /locus_tag="VIQ50_12160"
     CDS             complement(10223..10735)
                     /locus_tag="VIQ50_12160"
                     /inference="COORDINATES: protein motif:HMM:NF025292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin-like domain-containing protein"
                     /protein_id="HEY9361182.1"
                     /translation="MNCGNILRIATIAALGIASMTSATLGQPKNSDKERFIGTWTLVS
                     LTSGEGANQTLPYGPNPRGTMMVDANGRFSIMVMRSDLAKFVSNNRMSGTPDENKAVV
                     QGSIAYFGTYSIDEATHVLTVNVEGSTFPNFVGGTQTRILCFDDNEVTYFNPTPSMGG
                     SAKVTYRRAK"
BASE COUNT         2020 a         3576 c         3238 g         1958 t
ORIGIN      
        1 gcgcaactaa actccgcggc aggccggcgc gcgccgagga ggcgctagcc caaaaaccta
       61 atgtcgtccg gcaaacatag gggaagctgc cccgctttcg tgcatggccc gggccacgag
      121 tttgcccagg ttcgctggtt cgctcccacc aagtcgcgct caagtcgcgt agtcgggaag
      181 cgtaaacatg agtagcaaca acatctaccg caacaacgcg gaagactgct tgcgaatggc
      241 acaaaccgtg gtgaacgacg gcgacaggcc tttctggctc acgctcgcgc aatcatggct
      301 gcggctcgcc gagcgcgcgg cgcgcggccg gagcgaaacg gatacgcaga gcccgcccgt
      361 cggctccgag aaccgttgat cacctcgccg tcagccgttc gttggcacgc gccgcccgca
      421 gacgaacggc gccgcccgaa tgccgatcat agcggcaggt tgtcgtgctt tctttccggc
      481 atctccaccc gcttgccccg cagcatcgcg agtgctttgg cgatgcgcgc gcgcgtcgca
      541 cgcggcatga tcacgtcgtc gatgtagccg cgctcggccg cgacgaaggg tgagaggaag
      601 cggtcctcat attccttagt gcgggcggcg atcttcttgg cgtcgcccat atccgcgcgg
      661 aagatgatct cgaccgcccc ttttgcgccc atcaccgcga tctgcgcggt cggccaggca
      721 tagttgacgt cgccgccgat gtgcttcgac gccatcacgt cataggcgcc gccgaatgcc
      781 ttgcgcgtga tcacggtgac gagcggcacg gtggcttgcg aataggcgaa gagcagcttc
      841 gctccgtgcg cgatcagcgc gccgtattcc tggttcgtgc cgggcaggaa tccgggcacg
      901 tcgacgaacg tcacgattgg aatgccgaac gcgttgcaga agcgcacgaa gcgcgccgcc
      961 ttgcgcgagg catcgatgtc gagcacgccc gcgagcacca taggctggtt cgcgacgaac
     1021 ccaacgctgc gcccggcgat gcggccgaag ccagtgacga tgtttttcgc aaacgcctct
     1081 tgcagttcga agaaatcacc ctcgtcgacg accttgagga ggagttcctt gatgtcatag
     1141 ggcttgttgg gattatccgg caccagggta tcgagcgatt tctcctcgcg ctcgacatcg
     1201 tcgcgcgagg gcaactccgg caccccagcc tcgttgttgg cgggcagaaa gtccagcagt
     1261 cggcgcatct gcaacaggca ctcgacgtcg ttctcgtagg acccgtcggc aatgccggac
     1321 ttcgtcgtgt gcacgcccgc gccgccgagc tcctccgcgg tgaccacctc gttggtcacg
     1381 gtcttcacca cgtcggggcc ggtgacgaac atgtagctgg tgtcgcgaac catgaacacg
     1441 aaatcggtca tggccgggga atagacgtcg ccgccggcgc atggacccat gatcaccgaa
     1501 atctgcggaa tgacgccgga ggcgatcacg ttgcgcttga atacctcgcc gtagcccccc
     1561 aacgcggcga cgccttcctg gatgcgcgcg ccaccggcat cgaacaggcc gatgattggt
     1621 gcccgagcct tcatcgccat gtcttggatc ttgacgattt tctgcgcgtg ggcttcggac
     1681 agcgaaccgc cgaagacggt aaaatccttg gcgaaggcga atacggttct accgttgacg
     1741 gtaccccagc cggtgacgac gccgtcgccg gggatcctgc tcttctccat gccgaactcg
     1801 gccgagcgat gctcgacgaa catgtcgaac tcctcgaacg aacctttatc catcaagagt
     1861 tcgagccgct cgcgggcggt gagcttgccc cgcttgtgct gcgcttcgat gcgcgcctcg
     1921 ccgcccccgg cgcgtgcccg cgcgcgacgt tcttcgagtt tctcgagaat gtccttcatg
     1981 gccgcgcctc gcccctccga cgcaaaatcc atagcatgta cgggcatttg agagtaaact
     2041 ttccgccgtg taagcgtact ggaggggagc aaaacatgcc tcaaggattc cgctacaagg
     2101 cgttgtgtta ttccagcgct gcgctgcttc tcgccacggc agcggccgtg gcgccggcga
     2161 tcgcgcaatt tccgccggcg gccgaggatc agcccgcggc gaagggcaag aagggcgccg
     2221 ccacagggag caccagcctc aacggcaact ggagcggtga actcacgcag gtcggcagcc
     2281 aaacgcctta caagttcgag ctcgcgatca atgccaaggg agtggagacg aagtaccccg
     2341 atctcgactg caccgggaag ctcacccgcg tcggctcgtc gaaatcctac acgttctacg
     2401 tcgagaacat caccaagggc caagtcgaca agggcggccg ctgccccgac ggcaccgtca
     2461 ccttagcgcg ccaaggcaat gatctcgcgc tcgggtggtt cggcagcgtg caaggtacga
     2521 ccgtcatcgc gtacgggaca ctgaagaagc aataactagt gtcatttcgc gctacttaac
     2581 cgcttccaac actgtcgccg ccgcctgcat ttcggcaaag cgggcggcgc gccgctcgag
     2641 cgcgatcgcg tcacggcccc aaaactccat attccagtcc tcgtcgacgt gtgcggccga
     2701 ccaggcggca tcgaccgaca ccgcggcgtg cgccaaggcg atcgcaatca atgccgagcc
     2761 ggtcagcgtc gtgatggtgt gcaccgcgcc cagacgccat gggtcactcg gtatggcgga
     2821 gcttgccgcc gccagcgctt gcgcgggctg cgcgacgaaa gcgattccct ccgccagcac
     2881 gaaacgcgca cccatggctt cgcgtgccca ggcgagcacc gggtcccagg ctttggcctg
     2941 ccacatgacg agaccggcgg ggccgggggc gcgataaaac aggagatcgc aggcgagata
     3001 ccgttccacc tccgccgcca ccgccgcggt cgcgtcgatc acgccgtcga tgatggtatt
     3061 ggcaagacgc gtgagaggca ttttcgcggg atcgatcgcc tcgcgctggg cctcccactc
     3121 cgccgccaag tgttgcgcca gcgcgcggct cggcgccgcc agcgtgcgtc gcgccggtgt
     3181 cttgaccggg tgcccgtcca gcacgatggg gaattcctcc tcggcgtcgc ctatctcgac
     3241 tcgctcatag aagcgtcgcc gcagctgcgg ccgcatcgcg cgccgcgctg cctgcgtggg
     3301 gtcacgcggc tcctcgtcga agatgccttc gaacagatcg cgcatacgct tcaagatggg
     3361 ctgcggccgc ggatcattca acgcgcaatt cgccgatctt gtgagaccga atgctttcgc
     3421 cgatgatcgc cttcggctcg aaatcgggac gaagcacaat gaaggtcggc gttttcgacc
     3481 acctcgatcg caacgaccgg cccctcgacg cgttctatga ggagcggctg aagattgtcg
     3541 aagcctacga tcgcggcggc ttctacgcct atcacacggc cgaacatcac gcgacgccac
     3601 tcggccttgc cgcctcgccc agcgtttttc ttgccgccgt cgcgcagcgc acgcaacgcc
     3661 tgcgcttcgg tcccctcgtc tatacgcttc cgccccacca tcccctgcgt gtggtcgagg
     3721 agatctgcat gctcgaccag ctcagcaggg gccgcttcga gctgggcgtc ggccgcggca
     3781 tctcgccgat cgagaccgcc tactacggga tcaatcccga tcaccgacaa aagatgtatc
     3841 tcgaagcgct gcaaatactg cggcaggcac tcacccagcg cacgctgacg tttcacggcg
     3901 agttctatcg ctatgtcgac gtgccgatcg agctcgagcc gttccagaag ccgcaccctc
     3961 cgttctgggc cggcacggcc acgcccgacg gggcggagac cgcggcccgc aacggcttca
     4021 atctggtcgc caatgcgctg acctcgcaga tacgcacgct gacggattgc taccgcgcag
     4081 cgttcaaggg gatgcacact cccatgctgg gcctggctcg gttcgtcatc atggccgaca
     4141 cggatgccga ggcattggcc atcgcgcgcc gtgcctaccc gctttggcac cgccacttcc
     4201 accatctctt tcgcatgcac ggcaccagcc ccgccggcgg ggaccggccg gcgcacttcg
     4261 atcagatcaa ggatggcgac cgcggcatcg ccggctcgcc ggcgacggtg gcgcgcatga
     4321 tcagggcgca gatgcaggag gccggcacca actatttcgt cgcccagttc gccttcggcg
     4381 acttaacgct cggcgaggtg ctgcgcacgg tcgatctttt tgcgcgcgag gtgatgccgg
     4441 cgctgaggga cacgtaaggc gggcaaagcg ttcgttgccg cacccatcgc tttgccgccg
     4501 ggcggcaggg acgcgaccaa gaagcgcctc gcgcaaactt gcagatacgg ccctctcgca
     4561 atgcaccatc ggcactggcc gaaacatatg aatatcttca ataccttatc gcccagcggg
     4621 acgaggtaac ggccttttta caaggtttgc cgctagcttg agccatggtg cgcgcgaacc
     4681 ggcgcggggc gccttcgtta tcccctaaag gcctgttatg acgaacgtat cggtggaatt
     4741 tcgagggggg ctccactact atccccgccg gattcggcgg accacaagcc gaagcggggg
     4801 gactgaccgg ccgacgtttg ttcgcgcatg gttcttgagt ggagcgcggc caagcgtacg
     4861 tgcagaggca taaatgaaac ctaccgacat ttcgacgccg gactacttcc acaaggtcgt
     4921 ggactgccag tgggcgtgtc cggcgcacac gcccgtcccc gaatacatcc ggttgatcgc
     4981 cgctggccgc tacagcgacg cctacatgat caactggaaa tccaacgtgt ttcccggaat
     5041 tctcggccgc acctgcgacc gaccgtgcga gcccgcctgc cggcgcgtgc gcgtggagaa
     5101 cgagccggtc gccatctgtc gattgaaacg cgttgccgcc gacttcaagg acgacatccg
     5161 cgggcgcctg cccagaccgg cggcggtcaa gaacggcaaa cgcattgcgc tcgtgggtgg
     5221 cggccccgcc tcgctgacgg tcgcgcgcga tctcgcgccg ctcggctatc actgcgtcgt
     5281 gttcgaccag gatccgaagc ctggcggcat gatccgcacg cagatcccac gctttcgcct
     5341 gcccgagtcc atcatcgacg aagaatgcga ttacattctc aatctcggca tcgaatttcg
     5401 cggcgataag cgcatcgaca gcctcaaagc actgctggcg gagggttggg acgcggtttt
     5461 cgtcgggtgc ggcgcgccgc gcggtcgcga tctcgacgtt cccggccgca aggaggcggc
     5521 cgccaacatc catatcggca tcgattggct ctcctcggtc tccttcggcc acatcaacaa
     5581 gatcggcaag cgcgtcatcg tgctcggcgg cgaggacgtc aaggtgatcg tccgttccgg
     5641 ctttgaggag atgaaggcgt ccccctggga aaaggaggac gccatgcacg aagacatccc
     5701 gatcctgaat ttcctcgtgc cgaaagaatt cacccacgag aatggccgcc tcaccggcgt
     5761 ggtgttcgag aaggtcaagg ccgaatacga caccaagggc cgtcgcaatc tcgttccaac
     5821 gggcgagccc gatcagcact tcccttgcga cgacgtgctg gtcgcggtcg gtcaggagaa
     5881 cgctttccct tggatcgagc gcgacagcgg catcgaattc gacaagtgga acatgccgaa
     5941 ggtcgatccg aagacgatgg catcgagcca cccgcgcgtg ttcttcggcg gcgacgccgc
     6001 attcggcccg aaaaacatca tctgggcggt cgcccacggc cacgacgccg cgctctcgat
     6061 cgacaagcta tgctccggct ccgacgtcaa cgaccgtcca atgccgatgg tcgagatcgt
     6121 cagccagaaa atgggcatcc acgagtggag ctacgacaac gacatcgcac ccgaccggcg
     6181 ctaccgagtg ccgctgcgcg acaaggtggt ggcgctgcgc gacatcaaga ccgaggtcga
     6241 gctcggctac gaccccgatc ttgccctcag ggaggctcac cgctgcctca attgcgacgt
     6301 gcagaccgtg ttcacctcct cgctgtgcat cgaatgcgat gcctgcgtcg acatctgtcc
     6361 gatggactgc atcacgttca cgcctaacgg ggaggaagcc gatttgcgca cccggctcag
     6421 ggcgccggca aagaacgtca cccaggatct ctatgtcgcc aacgatctca agaccggccg
     6481 cgtcatggta aaggacgagg acgtgtgcct gcactgcggg ttatgcgcag agcgctgtcc
     6541 gaccggcgcc tgggacatga aaaaatatct catcgacatg acgcacgcga atgaccaatg
     6601 ccgagtagca gcccgatcag cagcgtaaac gacttcgtcg tccggttcgc caacgtcaac
     6661 ggctccggct ctgccagcgc caacgagctg ttcgcgcgct cggtgctgcg gatgggcgtg
     6721 ccggtcgcgc cgcgcaacat tttcccgtcc aacatccagg gcttgccgac ctggtacgaa
     6781 gtgcgcatct cggaggccgg gcacctcggc gcgcgcgggg gcaccgatct catggtcgcg
     6841 atgaacccgc agacctggga aaaggacgtg gcgggtatcg agcccggcgg ctatctgctc
     6901 tacgattcca ccaagccgat gccgaaatcg aagttccgcg aggacatcac ggtcattggt
     6961 gtgccgctga cggcgatctg caatcgtgaa tacagcgatc cgcgccagcg ccagctgttc
     7021 aagaacatca tgtatctcgg cgcgctctgc gcgcttttgg acatggacgt ggcggcggtc
     7081 gagcagctgg tcagagagca gttcaagtcg aaggaaaagc tgatcgacgc caacctgcac
     7141 gcgctacatc tcgggcgaga ctgggcgctg cagaatctgc agtgtccgat cggcttacgt
     7201 gtgcgtcacg ccaagacggt cggcgatcgc atcttcgtcg aaggcaactc ggccgcggcg
     7261 ctgggcgccg tttatggcgg agcgaccgta tgcgcgtggt atccgatcac gccctcctct
     7321 tcgctggcgg atgccttcac cagccattgc cggcggctgc gcgtcgacgc gggaaacaaa
     7381 aggaacaagt ttgcgatcat ccaggcggag gatgagctcg cctcgatcgg catggtgatc
     7441 ggcgcggcgt ggaacggcgc ccgcgcgttc acagccacct ccggtcccgg catttcgctg
     7501 atgcaggagt ttctcggctt ggcgtacttc gccgaaattc ccgcggtcat attcgacgtg
     7561 cagcgcgccg ggccttcgac cgggatgccg acgcgtaccc aacaatgcga tctcatctcc
     7621 tgcgcctatg cctcgcacgg cgacaccaag cacgtgctcc tgctgccgga agatccggcc
     7681 gaggccttcg acttcgcggc ggacgcgttt gatcttgccg accgcctgca gacgcccatc
     7741 ttcgtcatgc tcgacctcga tatcggcatg aaccatcgcc tatgccgtcc gctgacttgg
     7801 gacgacggcc gcaaatacga tcgcggcaag gtgatgaccg cggcggatct cgaggccggc
     7861 aaggatttcg gccgctacct cgatgtcgac ggcgacggca ttccgtaccg cacctatccg
     7921 ggcacacatc cgagcaaggg ctcgtttttc acccgcggca cttcgcgcga ccgctacgcg
     7981 cgttacaccg aagagggcgc gccctacgcc gacaacatgc agcggctgct gcgtaaattc
     8041 gagaccgcca aggatctggt tccgcgcccg ctgcaggcca atgcagcaaa accgacgaaa
     8101 tacggcgtca tctattacgg ctcgacctcg ccggcgatgg acgaggcgat ccatatgatc
     8161 gaggcgcgcg gtcatttgct caatcgcctg cggctgcgcg ccttcccttt ccattcgagc
     8221 gtgaccagct tcgtcgccga ccacgacttc gtcttcatcg tggagcagaa ccgcgacggc
     8281 cagctgcgct cgctcatcgt caacgaatgc agcatcgatc ccgtacgcct ggtgccgatc
     8341 ctgcactacg acggcacgcc gatcaccgcc cgattcatca cccgcgcgat cgccgatcat
     8401 ctcgatgcgc tgaaggttac cccgttgcgc aaggcggtgt catgacagcg tccaccggca
     8461 tgagcgcgca aagaatggct cgaccatgac ctacattacc aaacccaagt tccatcatcc
     8521 ggcgctgccg aagaacgcgc tcggctacac ccatcgcgac tatgagggtt cggtatcgac
     8581 cctgtgcgcc ggctgcgggc acgactcgat ttcgggggcg atcatcgacg cgtgcttcca
     8641 gctcgacatc gaaccgcatc gggtggccaa gctttccggc atcggctgct cctcgaagac
     8701 ccccacctat tttctcggca attcccacgg cttcaattcg gtgcacgggc gaatgccttc
     8761 ggtgctcacc ggcgcgaatc tggccaaccg ggatctcatc tatctcggcg tgtccggcga
     8821 cggcgattcc gcctccatcg gacttggcca gttcgcgcat gcactccgcc gcggcgtcaa
     8881 tatggtttac gtcgtcgaga acaacggcgt ttacggcctc accaagggcc agttctcggc
     8941 caccgccgat cgcggatcga aatccaagcg cggcataacc aacaccgaca attccatcga
     9001 tctcgtcgcc atggcgctgc agctcggcgc cacgttcgtc gcccgctcgt tctccggcga
     9061 caaggagcag atggtgccgc tgatcaaggc agcgatcgaa catgaaggcg cggccttcat
     9121 cgacatcatc tccccctgcg tcgccttcaa caatcacctg gggtccacca agagcttcga
     9181 ttacgtgcgc gaacacaacg aagcggtgaa ccggctcgac ttcatgaccg gccgtgcgcc
     9241 gattacggtc gcgtacgaac ccggctccgt cgaggtggtc gagcagcacg acggctcgaa
     9301 gctcgtgctc aagaaggtcg cggccgatta cgacccgcac gaccggttgg gcgccgtcaa
     9361 cttcctgcag cggcacgccg ctgcgggcca ggtcgtcacc gggctgctct atgtcgagcc
     9421 ggaacccgaa gacctccacc gcaatttcaa taccgtcgaa ggaccgctca atgccctggc
     9481 ggagccggat ctgtgcccgg gctcggcgat gctcgagaag atcaacacga gcctgcgctg
     9541 attcttgcta cgcgtgacca gatcaggcca agcggcatca acccgccgcg cgccacggct
     9601 tcttcgccac ggcctccttg atcgcctcca gcatcccctt cggcggcccc attttaacgc
     9661 tgatcgcgat aggtctgccg gtctcgagca cgcttttgag gctcgagagg atgaacggcc
     9721 aaccctggcg accgccggcg aggatcgcgt ccggaacgtc ccattggaac gcttctgtta
     9781 ccgtcaactt cacgctctcg cccatcggtt cgatgtcgta ggtcaccaat gattccggca
     9841 gttctcggaa ctcctcgaaa tcaacggccc aggtgaccga gagccggcgc ggcggatccc
     9901 atgcggtgac gcgtcctttg atgtcgagac ggccatccgg catgcgcaga acaaaattgc
     9961 cgccgatttg cggctcaagc tcaacggtcc ggccgaagaa gtattgccgg gtgaactcgg
    10021 cgctggtcag cgcttcccac actttctccg gcgtgccggc gatgtagatg acatagaccg
    10081 tcttcggcac aaatctcggc tcgttcattt ttttgcctcc agaccgcgtt tgagttcggc
    10141 gagcgcgcca aggcatgtca gccgcgggcc agggtccgga gcgcgtctca ttcctcgcaa
    10201 gtgaattaag cgacggctgc ccttatttcg cgcgccggta ggtcaccttg gcgctgccgc
    10261 ccattgacgg cgtgggattg aaatacgtca cctcgttgtc gtcgaagcag agaatgcgcg
    10321 tttgcgtgcc gccgacgaaa ttcgggaacg tgcttccctc gacgttgacc gtaagcacgt
    10381 gggtcgcttc atcgatagag taggtgccga aataggcgat gcttccctgc acgaccgcct
    10441 tattctcgtc cggcgtcccg ctcatgcgat tattcgaaac aaatttcgcc agatccgaac
    10501 gcatgaccat gatcgagaat cgaccattgg catccaccat catcgtgccc cttggatttg
    10561 gaccgtaagg cagggtctga tttgctccct cgccggacgt tagcgagaca agcgtccatg
    10621 ttccgataaa gcgctctttg tcgctatttt tcggttgccc gagcgtagcg ctggtcatcg
    10681 atgcgattcc caatgcggcg attgtcgcga tgcgaagaat gttaccgcaa ttcatggtcc
    10741 ggctccctgg gtgttcgcgc aggcgtccgc gcgcctcaat tctatagaaa aa
//
LOCUS       DATCWM010000619         2855 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_490450, whole genome shotgun sequence.
ACCESSION   DATCWM010000619 DATCWM010000000
VERSION     DATCWM010000619.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2855)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2855)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2855
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_490450"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..267
                     /locus_tag="VIQ50_12165"
     CDS             <1..267
                     /locus_tag="VIQ50_12165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361183.1"
                     /translation="TAALGPCPHRQIKNVGAYMKKFNNTLEGTDCGDAGLPANSHEIA
                     KPKTMLRVVPKIPETSARDHLSKPEANSTIASHSERGSGPPEPR"
     gene            complement(495..1523)
                     /locus_tag="VIQ50_12170"
     CDS             complement(495..1523)
                     /locus_tag="VIQ50_12170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEY9361184.1"
                     /translation="MRVVIGWDVGGAHLKAARAEDGCIVDAVQVASPLRLGLERLAQA
                     FVDAKARIGSGDLHVVTMTGELADTFTSRAEGVQALAALAASELAPATVSLYAGRAGF
                     VAPEHAHRHWQDIASANWYASASLAARAVRTALLVDIGSTTTDLVPVVTGSVAAHGYT
                     DAERLAAGELVYTGMVRSFAMAVAERAPFAGRWSPLINENFATMADVHRILGQLPDGV
                     DQMATPDGRAKSIEASRARLARMIGCDMDDASEAAWSMLARWFAEGQIRAIIDGAMLV
                     LSYGRVPASAPIVGAGIGNIVVREVARRLGRKHVAFGNVINVAPHARDRASHCAPAAA
                     LACLASSS"
     gene            1609..2292
                     /locus_tag="VIQ50_12175"
     CDS             1609..2292
                     /locus_tag="VIQ50_12175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008836320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HisA/HisF-related TIM barrel protein"
                     /protein_id="HEY9361185.1"
                     /translation="MLDLKQGVVVHARMGRRDEYRPIETPLSPTSDPVDVARGLLRVH
                     PFATLYVADLDAIARNGDNHAALTRLRAAFPQLSLWVDNGICDCSSAWDWLEAGWGLL
                     VLGSETQRDPTVVRHLAGDARVALSLDFRGPSFQGPRALLDDAACWPQKVIAMTLARV
                     GSGAGPDLERLCAIRDAAPGRQVYAAGGVRDATDLVTLKRADIAGALVASSLHLGRLT
                     GKEIDTLQS"
     gene            complement(2351..2848)
                     /gene="fae"
                     /locus_tag="VIQ50_12180"
     CDS             complement(2351..2848)
                     /gene="fae"
                     /locus_tag="VIQ50_12180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003608959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016840 - carbon-nitrogen lyase activity
                     [Evidence IEA];
                     GO_process: GO:0016051 - carbohydrate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formaldehyde-activating enzyme"
                     /protein_id="HEY9361186.1"
                     /translation="MNGLCVGESLVGEGNEVAHIDLIMGPRGSAAESAFAHALTNNKD
                     GFTSLLAVVAPNLLCKPPTILFNKVTIKGAKQAVQMFGPAQHAVAKAVADSVAEGVIP
                     QEEADNLFICVGVFIHWEAADDKKIQDYNYRATKEAIARAINGEPKVAEVVAKRDQVK
                     HPFAA"
BASE COUNT          506 a          931 c          888 g          530 t
ORIGIN      
        1 actgcagcgc tcggaccgtg cccgcatcga caaataaaga acgtcggagc ttacatgaag
       61 aagttcaaca atacgcttga gggcacggac tgcggtgatg ccggattgcc tgcgaacagc
      121 catgagatcg caaagccaaa gaccatgctt cgcgtcgttc cgaagatccc ggaaacctct
      181 gcgcgcgacc acttgtctaa gcctgaggca aactcgacca tcgcttcgca tagcgaacga
      241 ggctcggggc cccccgaacc tcgctgacgc tgctgaattt ttgccataac gcttccgtgg
      301 tttggtggag agttcaacgc cgcgccatgg ctcgacgtaa ctctcatgct ttgcttggat
      361 gatgagcagg agttgcggtc ggcgagagat gtcactcctc gcctcacttg atctcggtaa
      421 tgtacacggc gagggtcctg ccctccgctg ttttgcgctt tgatccaagc cgatcgctgc
      481 actgagttcg ttcctcacga cgacgaagcg aggcaggcga gcgcggcggc cggggcgcaa
      541 tgggatgccc ggtcacgggc atggggtgca acattgatta cgttaccgaa tgctacatgc
      601 ttgcgcccca gacgacgggc gacctcccgc accactatat tcccgatgcc tgctccgaca
      661 atcggcgcgc tggcgggcac tcgtccgtac gacagcacca gcatcgcccc gtcgatgatc
      721 gcgcgaatct gcccttcggc gaaccatcgc gccagcattg accacgcggc ctcgctggca
      781 tcatccatgt cgcatccgat catgcgcgca agccgagcgc gcgacgcttc aattgacttg
      841 gcgcggccgt ccggcgtcgc catctggtcg acgccgtcgg gcaattgacc tagaatgcgg
      901 tgaacatccg ccatggtggc gaagttttcg ttgatcagcg gcgaccagcg gccagcgaac
      961 ggcgcgcgtt cagccaccgc catcgcgaag ctgcgcacca tgccggtata gacgagctct
     1021 ccggcggcca ggcgctcggc atcggtgtag ccgtgtgctg cgactgagcc cgtcacgacc
     1081 ggcaccaggt cggtagtggt cgacccgatg tctacgagca acgccgtgcg gacggcacgg
     1141 gcggcgaggg atgcgctagc ataccagttg gccgaagcga tgtcctgcca gtgcctgtgc
     1201 gcgtgctccg gcgcgacgaa gcccgcgcgt ccggcgtaga gcgagaccgt cgccggcgcg
     1261 agctcgctcg cagcgagcgc cgccagcgct tggacaccct cggcgcgcga ggtgaacgta
     1321 tctgccagct cgccggtcat ggtaacgaca tgaaggtcgc ccgatccgat ccgcgccttg
     1381 gcgtcgacaa acgcctgcgc caggcgctcg agccccaggc gcaggggcga ggcgacctgg
     1441 accgcatcca cgatgcagcc gtcctcggcg cgggcagcct tgagatgggc gccgcccacg
     1501 tcccatccga tcacgacgcg catgttccgt tccgtgccac gcctgttata ctccataacg
     1561 cgtcgtcatc gatgtcaaaa agtcgccgcc gccatggaga tcatccccgt gctagatctc
     1621 aagcaaggcg tggtggtgca cgcccgcatg ggaaggcgcg atgagtatcg cccgatcgag
     1681 acgccgctct cgccaaccag cgatcccgtc gacgtggcgc gcgggctgct ccgggtacat
     1741 ccattcgcga cgctctacgt cgcggacctc gatgcgattg cgcgcaacgg agacaatcat
     1801 gccgcgctca cgcgactgcg agccgcgttt ccgcagcttt ccctctgggt cgacaacggc
     1861 atttgcgatt gctccagcgc ctgggattgg ctcgaagccg gatgggggct gctggtgctc
     1921 ggcagtgaaa ctcaacgcga tcctacggtc gttcgtcacc tcgcgggcga tgcgcgggtt
     1981 gcgctgtcgc tcgattttcg cggcccatct ttccaaggcc cgcgggcgct gctcgacgat
     2041 gccgcgtgct ggccacaaaa ggtaattgcc atgacactcg cacgcgtcgg cagcggcgcc
     2101 ggcccggatc tcgagcggct atgcgccatc cgcgatgccg cgccgggacg acaagtttac
     2161 gcggccggtg gcgtgagaga tgccaccgat ctcgtcacct tgaagcgcgc cgacatcgcg
     2221 ggcgcgctcg tggcatcaag ccttcacctg ggtcgtttga ccggcaagga gatcgacacg
     2281 ctgcaatcat gagcacttcg cccacccgaa tcaacgctgg gcattgggca gagggcacga
     2341 cgcggaggcg ctaggcggcg aaggggtgct tcacctggtc gcgtttggca acgacctcgg
     2401 cgactttcgg ctcgccatta atggcgcgcg cgatggcctc cttggtggct cggtaattgt
     2461 aatcctggat ctttttgtcg tcggccgcct cccaatggat gaacacgccg acgcagatga
     2521 agaggttgtc ggcctcttcc tgtgggataa ctccttccgc gacgctgtcg gccactgctt
     2581 tagccaccgc gtgctgggcc gggccgaaca tctgcacggc ctgcttcgca cctttaatgg
     2641 tcaccttgtt gaacaggata gtgggaggct tgcacagcaa attcggtgcc accaccgcta
     2701 gcagcgatgt gaagccgtcc ttgttgttgg ttagagcatg ggcgaatgcc gattctgcgg
     2761 cgctgccacg cggccccatg atgaggtcga tgtgtgccac ctcgttgcct tcaccgacga
     2821 gcgattcacc gacgcacagt ccgttcacct ttgcc
//
LOCUS       DATCWM010000620         2948 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_128856, whole genome shotgun sequence.
ACCESSION   DATCWM010000620 DATCWM010000000
VERSION     DATCWM010000620.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2948)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2948)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2948
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128856"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1025)
                     /gene="xseA"
                     /locus_tag="VIQ50_12185"
     CDS             complement(<1..1025)
                     /gene="xseA"
                     /locus_tag="VIQ50_12185"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HEY9361187.1"
                     /translation="MNEPARLNIREWTVSELSAALRRTVEDAFALVRVRGEISNFRGQ
                     HSSGHCYFALKDADAKIEAVIWRSTFGRMRIKPEEGLEVVVTGRLTTFPGKSTYQIVI
                     ETLELAGVGALMALIEARKKKLAAEGLFDTARKQLLPFLPERIGVVTSPTGAVIRDIL
                     HRLADRFPRHVMVWPVRVQGDGCAEEVAAAINGFNALPIDGPIRRPDLLIVARGGGSL
                     EDLQSFSEEIVVRAAAASMIPLIAAVGHETDVTLIDFAADKRAPTPTAAAELAVPVRL
                     ELGARVQSLTRRSLACWQRGQDARRSELRAAMRALPSAEELLAFPRQRLDHASTRLPR
                     ALTANAQ"
     gene            complement(1091..1498)
                     /locus_tag="VIQ50_12190"
     CDS             complement(1091..1498)
                     /locus_tag="VIQ50_12190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY9361188.1"
                     /translation="MDIKPSGSVPSRRGPADSFTGTVWQDPIIEAPARARLRGAFVRF
                     EPRARTAWHTHPLGQTLHVISGVGRVALWGGPVREIRPGDTVWIAPEEKHWHGAGPDT
                     AMLHIALQESLDGKHVTWFEHVSDEQYGAKVGG"
     gene            1690..>2948
                     /gene="purD"
                     /locus_tag="VIQ50_12195"
     CDS             1690..>2948
                     /gene="purD"
                     /locus_tag="VIQ50_12195"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HEY9361189.1"
                     /translation="MNILLLGSGGREHALAWKVSASPLVDRLYCAPGNAGIARECEVI
                     ALDIADHAAVIAFCRAQKIDLVVVGPEGPLCAGIVDDLAAAGIKAFGPTRAAARLEGS
                     KGFAKDLCKANAIPTAAYQRFNAADAAKHYVRAQGVPIVVKADGLAAGKGVIIPGTVA
                     EAEAAIDMMFGGALGAAGAEVVVEEFLEGEEASFFALCDGETAIALASAQDHKRAFDG
                     DRGPNTGGMGAYSPAPVMTDEASRRAMEEIVLPTVRAMKALGVPYKGVLYAGLMLTAQ
                     GPKLIEYNVRFGDPECQVLMLRLMSDLVPALLASCDGMLKNFDLRWYADAALTVVMAA
                     KGYPGSTAKGSPIEGLAEAGEVEGVEIFHAGTKADGGRVLANGGRVLNVCALGKSVAE
                     AQARAYRAVDRIRWPDGFCRRDIGFRAV"
BASE COUNT          450 a          973 c         1054 g          471 t
ORIGIN      
        1 atctgcgcgt tggcggtgag agcgcgcggc agacgcgtgc tggcatggtc gagccgctgg
       61 cgcggaaatg ccagcagctc ctcggcgctg ggcagcgcgc gcatggcggc gcgcagctcg
      121 ctgcgccgcg cgtcctgccc acgttgccag caggcgagcg agcgccgcgt caggctctgg
      181 acgcgcgcgc caagctcgag tcgcaccggc acggccaatt cggcggccgc ggttggcgtc
      241 ggcgcgcgct tatcggcggc gaagtcgatc agggtgacat cggtttcgtg ccccaccgcg
      301 gcgatcaagg ggatcatgct cgcggccgcc gcgcgcacca cgatctcctc gctgaacgac
      361 tgcaaatctt cgagcgagcc cccgccgcgc gcgacgatga gcaggtcggg ccggcgtatc
      421 ggcccatcga tgggaagcgc gttgaagccg ttgatggcgg cggcgacctc ttcggcgcag
      481 ccgtcgccct gcacgcgcac cggccacacc atcacgtggc gcgggaagcg gtcggcaagc
      541 cgatgcagaa tgtcgcgaat gacagcgccg gtcggcgagg tgacgacacc gatccgctcg
      601 ggcaggaacg gcaggagctg cttgcgcgct gtgtcgaaca ggccttccgc ggcgagcttc
      661 ttcttgcgcg cctcgatgag cgccatcagc gcgccgactc ccgcgagctc gagcgtctcg
      721 atgacgattt ggtaggtcga cttgccggga aaagtggtca gtcggccggt gaccacgacc
      781 tcgagccctt cctcgggctt gatgcgcatg cgcccgaacg tgctcctcca gatcaccgcc
      841 tcgatcttgg cgtcggcgtc ctttagcgcg aaatagcagt ggccggagga gtgctggccg
      901 cggaagttgg aaatctctcc gcgcacgcgc accaaggcga aggcgtcttc cacggtccgc
      961 cgcagcgccg ccgagagctc ggagacggtc cattcgcgga tattcaggcg cgccggctcg
     1021 ttcattgcga ggtggtgaat cagcttatcc gcgccgcgtc aactcgcctt tcgcagcgct
     1081 gcggagtgcg ttagccgccg accttcgcgc cgtattgctc gtccgagacg tgctcgaacc
     1141 aggtgacgtg cttgccgtcg agggattcct ggagcgcgat gtgcagcatg gcggtgtcgg
     1201 ggccggcgcc gtgccagtgc ttttcttccg gcgcgatcca caccgtgtcg ccgggacgga
     1261 tttcccgcac cgggccgccc cacagcgcaa cccggcccac gccggaaatg acgtgcaagg
     1321 tctggccgag cgggtgggta tgccaggcgg tgcgagcgcg cggctcgaag cgcacgaacg
     1381 caccgcgcaa ccgcgcccgg gcgggcgctt cgatgatcgg atcctgccac acggtgccgg
     1441 tgaaggagtc ggcggggccg cggcgcgacg gcaccgagcc cgacggtttg atgtccatgg
     1501 ctgcaagtcc tctctgcgct gaaggggtct gttcgcgcgc cgtcgtagca ccgatcgacg
     1561 cacggcagaa gagcgctccg ccggcctcgt tcttggcacg attgccgacc gtggtggcga
     1621 tcccttgcgg tgcaaccgcg ccatgctaca ccagccgcgg aaaaatcggt gcgcaagcgc
     1681 ggcgcaggca tgaacattct tctcctcggt tcgggcggac gcgagcatgc gctcgcctgg
     1741 aaggtttccg cgagcccgct cgtcgatcgg ctctactgcg cgccggggaa cgccggcatc
     1801 gcccgcgaat gcgaggtgat cgcgctcgac atcgccgacc acgcagcggt gattgcgttt
     1861 tgccgggcgc aaaagatcga cctcgtcgtg gtcggacccg aagggccgct ctgcgccggc
     1921 atcgtcgacg atctcgccgc cgccggcatc aaggcgtttg gtcccacgcg cgcggcggcg
     1981 cgcctcgaag gctcgaaagg cttcgccaaa gacctgtgca aggccaatgc cattcccacc
     2041 gccgcgtatc agcgcttcaa cgcggccgat gcggccaagc actatgtgcg cgcgcagggg
     2101 gtgccgatcg tcgtcaaggc cgatgggctc gcggccggca agggcgtgat catccccggc
     2161 accgtggcgg aggcggaggc ggcgatcgac atgatgttcg ggggcgccct cggtgcggcc
     2221 ggcgcggaag tggtggtgga ggaattcctg gagggggagg aagcctcctt tttcgcgctc
     2281 tgcgacggcg agaccgcgat cgcccttgcc tcggcacagg accacaagcg cgctttcgac
     2341 ggcgatcggg gtcccaacac cggcggcatg ggtgcctatt caccggcgcc ggtgatgacg
     2401 gatgaggcgt cgcggcgcgc catggaggag atcgtgctgc cgaccgtgcg cgcgatgaaa
     2461 gcgctcggcg tcccctacaa gggcgtgctc tacgccggcc tcatgctcac cgcgcagggc
     2521 ccgaagctga tcgaatacaa cgtgcgcttc ggcgatccgg agtgtcaggt gctcatgttg
     2581 cgcctgatgt cggatttggt gccggcgctg ttggcgagct gcgacggaat gctcaagaat
     2641 ttcgatctgc gctggtacgc ggacgcggcg ttgaccgtgg tgatggcggc caagggctat
     2701 cccggcagca cggccaaggg ctcgccgatc gagggtctcg ccgaggcggg cgaggtggaa
     2761 ggggtggaaa tcttccatgc cggcaccaaa gccgacggcg gccgggtgct cgccaacggc
     2821 ggccgcgtgc tcaacgtctg cgcgctcggc aagagcgtcg ccgaggcgca ggcgcgcgcc
     2881 tatcgcgcgg tcgaccgcat tcgctggccg gacgggttct gccgccgcga catcggtttt
     2941 cgagcggt
//
LOCUS       DATCWM010000621         3547 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_528492, whole genome shotgun sequence.
ACCESSION   DATCWM010000621 DATCWM010000000
VERSION     DATCWM010000621.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3547)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3547)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3547
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_528492"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1756)
                     /locus_tag="VIQ50_12200"
     CDS             complement(<1..1756)
                     /locus_tag="VIQ50_12200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEY9361190.1"
                     /translation="MAQNGTRATGPRCIALVGPFQSGKTTLLEAILARTGAIQRQGTI
                     EAENTVGDASKEARHHLMSVELSVASANFKGDTYTFVDCPGSVEFVHDMRAALPAVDA
                     AVVVCELDEKKVPQLQLIMRELEAQKIPRFLFVNKVDKADSTIHDVLRVLQPASRGKL
                     LVRQIPTFSGDIITGFVDLALERAFVYKEYAPSEVIPLEGDALDREKTARFSMLETLA
                     DHDDELMEQLLEDIQPPRDKVFDDLSKELREGLVCPVLFGSATRTNGVLRLMKALRHE
                     SPGIADTAKRLGVKSGQTVAYVLKTINTAHGGKMSVARVLAGKIGDGANVMTADGQTG
                     RVAAVFKLMGQNSEKRGAAEAGETVALGKLDHAKSGETLSDGAQPHAPIAKVAPHPPV
                     LSIAVATKERKDDVKLGQALAKLLEEDPSISVVHNAEAHEVVLWGQGEMQLRVATERL
                     ADRFGIATVSHKPTVGYRETIKKGIVQRGRHKKQSGGHGQYGDVVLDIKPLPRGSGFS
                     FSEEIKGGVVPRNYIPSVEEGVIDALKHGPLGFPVVDVAAKLIDGSYHTVDSSDMAFQ
                     LAGRLAIHDGLPQCQPVLL"
     gene            complement(1953..2429)
                     /locus_tag="VIQ50_12205"
     CDS             complement(1953..2429)
                     /locus_tag="VIQ50_12205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF992 domain-containing protein"
                     /protein_id="HEY9361191.1"
                     /translation="MFRYAVGAAALTLVVAFAEPAAAQRVRAGVLTCDISAGMSFIVG
                     SQKSVVCTFAPEPPGPEQVYSGSISKFGLDIGATGGGVMIWAVFTDSLAPPGAGFLAG
                     DYFGASGQVTIAAGLGANVLIGGNNNTVALQPISVSTSVGLNFALGVAELRLRSGP"
     gene            complement(2510..>3547)
                     /locus_tag="VIQ50_12210"
     CDS             complement(2510..>3547)
                     /locus_tag="VIQ50_12210"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007596745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEY9361192.1"
                     /translation="AIRRGETKYTDVDGTPALKQAICAKFKRENGLDYKPSQIIVGTG
                     GKQVLYNALVATLDPGDEVVIAAPYWVSYPEMVMLAGGEPVAVPTTLESGFKMSPEAL
                     ERAITPKTKWVLLNSPANPTGAAYTRAELKQLTDVLVRHPNVYVMTDDMYEHLVYDEF
                     EFTTPAQVEPRLYDRTLTVNGVSKTYCMTGWRIGYAGGPEPLIKAMAMVQSQSTSNPT
                     AVSQWAAAEALDGPQDFIAKHNAIFKERRDLCVSMLNQARGIRCPKPEGAFYVYPSCA
                     GTMGRTAPTGRKLGTDEDFVTELLEAEGVAVVQGTPFGFGPAFRISYATKTEDVEEAC
                     RRIQRFCGNLT"
BASE COUNT          592 a         1152 c         1154 g          649 t
ORIGIN      
        1 cgagcagcac cggctggcac tgcggcaatc catcgtggat cgcgagccta ccggcgagct
       61 gaaacgccat gtcggaggaa tcgaccgtgt gataggagcc gtcgatcagc ttcgccgcga
      121 cgtcgaccac cgggaagccg agcggaccgt gcttgagcgc gtcgatgacg ccttcctcca
      181 ccgaaggaat gtagttgcgg ggcacgacgc cgcccttgat ctcctcgctg aagctgaagc
      241 ccgatccgcg cggcagcggc ttgatgtcga gaacgacgtc gccgtattgg ccgtggccgc
      301 ccgattgctt cttgtggcga ccgcgctgca cgatgccctt cttgatggtc tcgcggtaac
      361 ccaccgtcgg cttgtgcgag acggtggcaa tgccgaaacg atcggccagc cgctcggtgg
      421 cgacgcgcag ctgcatctca ccctggcccc atagcaccac ttcatgcgcc tcggcgttgt
      481 gaacaacgct gatcgagggg tcctcctcga gcagtttagc gagcgcctgc ccgagcttga
      541 cgtcgtcctt gcgctccttg gtggcgacgg cgatggacag caccggcgga tgaggagcga
      601 ccttggcgat cggcgcatgc ggctgcgcgc cgtcgctcag ggtctctccg ctcttggcat
      661 gatcgagctt gccgagcgcg acggtctcgc cggcctcggc ggccccgcgc ttctcgctgt
      721 tttgacccat gagcttgaaa accgccgcga cacgtccggt ctgcccgtcg gcggtcatga
      781 cattggcgcc gtcgccgatc tttcccgcga gcacgcgcgc cacggacatc ttgccgccgt
      841 gcgcggtatt gatggtcttg agcacgtaag cgacggtttg gcccgatttg acgccgagtc
      901 gcttggcggt atcggcaatg ccgggcgact cgtggcgcaa cgctttcatc agccgcagca
      961 ccccgttggt gcgcgtggcc gagccgaaca gcacggggca caccagaccc tcgcgcaatt
     1021 ccttggaaag atcgtcgaat actttgtcgc gcggcggctg aatgtcctcg agcagctgct
     1081 ccatcagctc gtcgtcgtga tcggccaagg tctccagcat cgagaacctt gccgtcttct
     1141 cgcgatcgag cgcatcgcct tcgagcggaa tgacttccga cggcgcgtac tccttgtaga
     1201 cgaacgcgcg ctccagcgcg agatcgacga agccggtgat gatgtcgccg gaaaacgtcg
     1261 ggatctgccg caccagtagc ttgccgcggg aggcgggctg caagaccctg agcacatcgt
     1321 ggatggtgga atccgccttg tcgaccttgt tgacgaagag aaaacgcgga attttctgcg
     1381 cttcgagctc gcgcatgatg agctgaagct gcggcacctt cttctcgtcg agctcgcaga
     1441 cgacgaccgc ggcatcgacc gccggcagcg ccgcgcgcat gtcgtgaacg aattcaaccg
     1501 agcccggaca atcgacgaaa gtataggtgt cgcccttgaa attcgcgctg gcgacggaga
     1561 gctcgacact catcaggtgg tgacgcgctt ccttgctggc gtcaccgacg gtgttctccg
     1621 cctcgatcgt gccttgacgc tggatcgcgc cggtgcgggc gaggatcgct tcgagcagcg
     1681 tggtcttgcc gctttggaac gggcccacca gcgcgatgca gcgtgggccc gtggctcgtg
     1741 tgccgttctg tgccatttcc gcctcccata gcgagcgaga tgcggccttc tgcgagaccg
     1801 tttcgactat cgtttcaggc cggagggaga ctggcaagag gcgtcggcgt ctcatgaatg
     1861 agggcggaac aggagcggac gaacgctcgt tcgctgacga aaaacggccg cctcgagggc
     1921 ggccgttcgt cattgcatcg agcttgcgcc ggtcaggggc cggagcgcag acgcagttcc
     1981 gccacgccga gcgcgaagtt gagcccgacc gaggtggaca ccgagatcgg ctgcaacgcc
     2041 accgtgttgt tgttgccgcc gatgagaacg ttggcgccga gccccgcggc gatcgtcacc
     2101 tgcccgctcg cgccgaagta atcgccggcg agaaaacccg cgcccggagg cgcgaggctg
     2161 tcggtgaaca ccgcccatat catcacgccg ccgccggtgg cgccgatatc gagcccgaac
     2221 ttgctgatcg agccgctgta gacctgttcc ggcccgggcg gctcgggcgc gaacgtgcac
     2281 acgactgact tctgcgatcc gacgatgaag ctcatgccgg ccgagatgtc gcaagtcagc
     2341 acgcccgccc gcactcgctg ggcggctgcc ggctcggcga acgcgacgac gagcgtcagg
     2401 gctgctgccc cgacggcata acgaaacata tggaccctcc ttttgctcga ttggcgcaag
     2461 cccgatcggg ttgcgactca gcggcagacc ttacgcaaga tcgcgatcgt catgtcaagt
     2521 tgccgcagaa gcgctgaatg cgccgacacg cttcctccac gtcttcggtc ttggtcgcat
     2581 acgagatgcg gaacgcggga ccgaagccga acggcgtgcc ctgcaccacc gccacgccct
     2641 ccgcctccaa cagctcggtg acgaaatcct cgtcggtgcc gagcttgcga ccggtcggcg
     2701 cagttctgcc catggtgccg gcgcacgacg gatagacgta gaaggcgccc tctggcttcg
     2761 ggcaacggat gccgcgcgcc tgattgagca tcgacacgca aaggtcgcgc cgttccttga
     2821 agatggcgtt gtgcttggcg atgaagtcct gcggtccgtc gagcgcctcg gccgccgccc
     2881 attgcgacac cgcggtcggg ttcgaggtcg attgcgactg caccatcgcc atcgccttga
     2941 tcaacggctc gggcccgccg gcgtaaccga tgcgccagcc ggtcatgcaa tatgtcttcg
     3001 agacgccgtt caccgtcagc gtgcgatcgt agaggcgagg ctcgacctgc gctggggtgg
     3061 tgaattcgaa ctcgtcatag acgaggtgct cgtacatgtc gtcggtcatc acgtagacat
     3121 ttggatgcct gacgaggacg tcggtcagct gcttgagctc ggcgcgcgta taggccgcgc
     3181 cggtcggatt cgccggcgaa ttgagcagca cccatttggt cttcggcgtg atcgcgcgct
     3241 cgagcgcctc gggactcatc ttgaagcccg actcgagggt ggtgggcacg gcgaccggct
     3301 cgccgccggc gagcatgacc atctccggat agctcaccca atacggcgcc gcgatgacca
     3361 cctcgtcgcc ggggtcgagc gtcgcgacca acgcgttgta gagcacctgc ttgccgccgg
     3421 tgccgacgat gatctggctc ggcttgtagt cgaggccgtt ctcgcgcttg aacttggcgc
     3481 agatggcctg cttcagcgcc ggcgtgccgt cgacgtcggt gtacttggtc tcgccgcggc
     3541 gaattgc
//
LOCUS       DATCWM010000622         2520 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_490477, whole genome shotgun sequence.
ACCESSION   DATCWM010000622 DATCWM010000000
VERSION     DATCWM010000622.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2520
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_490477"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            263..>2520
                     /locus_tag="VIQ50_12215"
     CDS             263..>2520
                     /locus_tag="VIQ50_12215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HEY9361193.1"
                     /translation="MRLLLRFFGLLFAAGTIIFIVAVAAAAGLLWHYSQSLPEYSQLQ
                     DYEPAVMTRVHAADGSLLAEYARERRLYIPIQAVPKLVINAFIAAEDKNFYEHGGIDF
                     SGIARAAVLYAQQYGSGRRPQGASTITQQVAKNFLLTNELSFARKIKEALLAMKIERA
                     FSKEKILELYLNEIYLGMGAYGVAAASLLYFDKSVHELTVAEAAYLAALPKAPNNYHP
                     FRQRERALERRNYVVDRMAEDHYITAQEAEKARKEPLKITPRPTGAHIFAAEYFAEEV
                     RRYIYENYTEKKLYEGGLSVRTTLDPKMQVLARKVLVDGFVHFDEQQGYRGPTHKLDL
                     AGDWGVKLADVKALSDVAPWRLAVVLEADDASARIGLQPGREPGGILSKQRETGTIAL
                     EGVKWAKPTSGPIRGKTPTKVSQVLSPGDVVYVEPLAEKDGQFRLRQVPEVSGAIVAM
                     DPQTGRVLAMAGGFSYDQSQFNRATQALRQPGSSFKPIVYATALDNGYTPSTVVLDAP
                     IEIDTGSGIWAPENYTRKYYGPSTLRFGIEQSRNVMTVRLAQDIGMPLIGEYARRFGV
                     YDNLPPYLSFALGAGETTLLRMVGAYAMFDNGGRKIQPTLIDRIQDRYGHTIYKHDSR
                     ECRGCEAGKWENQNEPTLIDKRERVLDPMTAYQITSIMEGVVQRGTATVVKEVGKPIA
                     GKTGTTNDEKDAWFIGFSPDLVVGVYLGYDKPRHLGRGATGGVLAAPIVRDFMKVALA
                     DKPAVPFRVPPG"
BASE COUNT          472 a          812 c          810 g          426 t
ORIGIN      
        1 cgcttcgatc gtcgaggcgg tggatgcgtt tttccgcccg cgcctggcgg gaagcgggca
       61 aagaagcggc cagaattgac tggactgtgg ccgtttagcc tcagtttcaa cataaaacag
      121 agcgacttag ttcgccggac cgagcgcggc aggagagggc gagcggcggg ggaaaatctc
      181 gcccgaggag accttggccg gctggcgggg ctcatcggca gatatcacag ccgcggcggt
      241 tcggggcagg ggaccttcgg gcatgagatt gttgctgcgc ttcttcggtt tgctgttcgc
      301 cgccgggacg atcatattca ttgtcgcggt cgcggcggca gccggcttgc tctggcacta
      361 ctcgcaatcg ctgccggaat attcccagct gcaggactac gagcccgcgg tcatgacgcg
      421 ggtgcacgcc gccgacggct cgctgctcgc cgagtacgcg cgcgagcggc gactctatat
      481 cccgatccag gcggttccca agcttgtcat caacgccttc atcgccgccg aggacaagaa
      541 tttctacgaa catggcggga tcgatttctc cggcatcgcg cgcgccgcgg tgctctacgc
      601 gcagcaatac gggagcggcc ggcgcccgca gggcgcctcc accatcacgc agcaggtcgc
      661 caagaacttc ctgctcacga acgaactgtc cttcgcgcgc aagatcaaag aagcgctgct
      721 ggccatgaag atcgagcgcg ccttctccaa ggagaagatc ctcgagctct acctcaatga
      781 gatctatctc ggcatgggag cctatggcgt ggcggccgct tcgctcctct acttcgacaa
      841 atcggtgcac gaattgacgg tggcggaagc ggcctatctc gccgcgctgc ccaaggcgcc
      901 caacaactat catccgttcc gtcaacgcga gcgcgccctc gagcggcgca actacgtcgt
      961 cgatcgcatg gccgaggacc actacatcac ggcgcaagaa gcggagaagg cgaggaaaga
     1021 gccgctcaag atcaccccgc ggccgaccgg agcgcatatc ttcgcggccg agtatttcgc
     1081 tgaggaggtt cgccgctaca tctacgagaa ttataccgag aagaagctct acgaaggcgg
     1141 cctctcggtg cgcacgacgc tcgacccgaa gatgcaggtg ctggcgcgca aggtgctggt
     1201 cgacggcttc gtgcatttcg acgagcagca gggctaccgc ggcccgaccc acaagctcga
     1261 tcttgcgggc gattggggcg tgaaactcgc cgacgtcaag gcgctctccg atgttgcgcc
     1321 gtggcggttg gcggtggtgt tggaggccga cgacgcgtcg gctcgcatcg ggttgcagcc
     1381 cggacgcgag ccgggcggca ttctctcgaa gcagcgcgag accggcacga ttgcgctcga
     1441 aggcgtcaag tgggcgaagc cgaccagcgg gccgatacgg ggcaagactc cgaccaaggt
     1501 ctcgcaggtg ctttcgccgg gagacgtcgt ctatgtggag ccgctcgccg agaaggacgg
     1561 ccagttccgc ctgcgccagg tgcccgaggt ctccggcgcg atcgttgcca tggatccgca
     1621 gaccgggcgg gttctggcga tggccggcgg cttctcctac gaccagagcc agttcaaccg
     1681 cgcgacccag gcgctgcgcc aaccgggctc ctcgttcaaa cctatcgtct acgccaccgc
     1741 gctcgacaat ggctacacgc cttccaccgt cgtgctcgac gcgccgatcg agatcgatac
     1801 cggcagcggc atttgggcgc cggaaaacta tacgcgcaaa tactacgggc catcgacgct
     1861 gcggttcggc atcgagcagt cgcgcaacgt gatgacggtg cgcctcgcgc aggacatcgg
     1921 catgccgctg atcggcgaat acgcccgccg cttcggcgtt tacgacaact tgccgcccta
     1981 cctctcgttt gcgctcggcg ccggtgagac cacgctgctt cgcatggtcg gtgcctatgc
     2041 catgttcgac aacggcggca ggaagatcca gccgaccttg atcgaccgca ttcaggaccg
     2101 ctacggccat accatctaca agcacgactc gcgcgaatgt cgcggctgcg aggccggtaa
     2161 gtgggagaac cagaacgagc cgacgttgat cgacaagcgc gagcgggtgc tcgatccgat
     2221 gaccgcctac caaatcacct cgatcatgga aggcgtcgtg cagcgcggca ccgcaaccgt
     2281 ggtcaaggaa gtcggcaagc cgattgccgg caagacaggc accaccaacg acgagaagga
     2341 tgcctggttc atcggcttct cgcccgacct cgtggtcggc gtctatctcg gctacgacaa
     2401 gccgcgacac ctcggtcgtg gcgccacggg cggcgtgctg gcggccccga tcgtgcgtga
     2461 tttcatgaag gtcgcgcttg ccgacaaacc ggctgtaccg ttccgcgtgc cgcccgggat
//
LOCUS       DATCWM010000623         2081 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_463354, whole genome shotgun sequence.
ACCESSION   DATCWM010000623 DATCWM010000000
VERSION     DATCWM010000623.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2081
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_463354"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(374..517)
                     /locus_tag="VIQ50_12220"
     CDS             complement(374..517)
                     /locus_tag="VIQ50_12220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361194.1"
                     /translation="MVASRAGRHPVTHHELDLAAVDADVPQRTIVEPAELENGAAPPS
                     FGG"
     gene            629..1045
                     /locus_tag="VIQ50_12225"
     CDS             629..1045
                     /locus_tag="VIQ50_12225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361195.1"
                     /translation="MLRTPEFRNCLLLVDVAQIGAPFDDETAAVNPQTPPKRRRRSRW
                     STALRLWAAASVCLAFGGAMSAESVPEVCSEADLRLTTRIEAHGEAQDVAGEVLAKAF
                     FTVLEARKACNQGQVEAAMKLYDSIPLGPVMSEIAD"
     gene            complement(1023..>2081)
                     /locus_tag="VIQ50_12230"
     CDS             complement(1023..>2081)
                     /locus_tag="VIQ50_12230"
                     /inference="COORDINATES: protein motif:HMM:NF040521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C45 family peptidase"
                     /protein_id="HEY9361196.1"
                     /translation="RRFAREIADNVATYLRRFAASGLGRDQAFAEAAQWRKAICVQDD
                     AYAEEMQGIAEGSGQSEETIALLNARYELAFTLFGQEARTAVRTAALVGPDGCTTFAL
                     LPQTTADHHTWLGQNWDWLAGVHGRSFVLHARRTEQPSFVCLTEAGIAGGKMGVNECG
                     IGLVENGLASSRDGSNPYQTPFHVRCRQVLDAEDFDAALRPVTGTPRTCSANFVIGAA
                     GGEIVNIESSPDHVSRLDPEDGVVTHSNHFLTAGHGESLLEKISPNTLYRADRMRALL
                     RAHRGAVSFEHMRSAAADHFGAPYAICRHPDASEPSERRTMTVGAVLIDLETRTMHVA
                     NGPPCANNYVAFSLQSLT"
BASE COUNT          366 a          678 c          689 g          348 t
ORIGIN      
        1 cgcactgggg ggcgggacag ggggagcgcc cccaacccat tgacagcgcg cgattttggg
       61 gaatctgcag aaaatctcca gaaaaattcc tgctgggccg aagcgttcct ccaagcctcg
      121 cccgcgactc gcgggtaagt agtcgaccac gcgctgcatg ccgcggcggt tgccccgtcg
      181 cgaggcagct tcaacccacc gcccggaggg ccccactatg ccccagacag gtcattccat
      241 accgcccttg tcgtccttcg agctcgagcg gcaagccgcc attgagcgca atctcttcat
      301 ccaggcctgc acacgcgcgg ccgtgaagtg gctgcgcatg cttctcctgc gaagtgcgcg
      361 attcgcacga cggctagccg ccgaacgagg gcggcgcagc gccattctcc agctccgcgg
      421 gctcgacgat cgtacgctgc gggacatcgg catccaccgc ggcgagatcg agttcgtggt
      481 gcgtaacggg gtgcctgccc gcgcgagacg caaccatcac caagagcgcc gacagagcgc
      541 tcctccacga ccacgcgctg cctagtcgaa accccacgtc gagcgcggag gcgcaatcac
      601 caacatcgaa accgaatgcg aggtggacat gcttaggacc cctgagtttc ggaactgcct
      661 cttgctggtc gacgtcgcgc agatcggcgc tccgttcgat gacgagaccg ctgcggtcaa
      721 cccgcagacc ccgccgaagc gccgccgacg ctcgcgttgg tcgaccgcgt tgcgactttg
      781 ggcggcagcg agcgtctgct tggcattcgg cggcgcaatg tctgcggaaa gcgtccctga
      841 ggtctgttcg gaggcagacc tcaggctcac cacacgcatc gaggcgcacg gtgaggctca
      901 ggacgttgca ggcgaggtct tggcgaaagc gtttttcacc gtgctggaag cgcgcaaagc
      961 atgcaatcag ggtcaggtcg aagcggcgat gaagctctac gacagcattc cgctcgggcc
     1021 ggtcatgtca gagattgcag actgaacgcc acgtagttat tggcgcaggg cggaccgttg
     1081 gcgacgtgca tggtccgcgt ctcaaggtcg atgaggacgg cgccgacggt catcgtgcgc
     1141 cgttcgctcg gctcgcttgc atcgggatgg cggcagatcg catagggcgc gccgaaatga
     1201 tcggcggcgg ccgagcgcat atgctcgaag gaaaccgcgc cgcgatgcgc ccgcagcagc
     1261 gcccgcatgc gatctgcgcg ataaagggtg ttgggggaaa tcttctccag cagcgactcc
     1321 ccgtgtccgg cggtcaggaa atgattggaa tgggtgacga cgccatcttc gggatcgagg
     1381 cgactgacgt ggtcggggct ggattcgata ttgacgatct ccccgccggc ggcgccgatc
     1441 acaaaattgg ctgagcaggt gcgcggggtg ccggtcaccg gccgcagcgc cgcgtcgaaa
     1501 tcctccgcgt ccagaacctg ccggcagcgc acgtggaacg gcgtttgata aggattgctc
     1561 ccgtcgcggc tcgaggcgag accgttttcg acgagcccga tcccgcattc gttgacgccc
     1621 attttgccgc cggcgatccc ggcctcggtg aggcagacga agctcggctg ctccgttctt
     1681 cgcgcgtgga gcacgaagct gcgtccgtgc acgcctgcaa gccaatccca gttctggccg
     1741 agccaggtgt ggtggtcggc cgtcgtttgc ggcaggaggg cgaacgtggt gcagccatcg
     1801 gggccgacga gcgccgccgt gcggaccgct gtccgcgctt cctggccgaa cagcgtgaag
     1861 gcgagttcgt agcgcgcatt gaggagggcg atggtctctt cgctctggcc ggagccctcg
     1921 gcaattccct gcatctcctc ggcataggcg tcatcctgca cgcaaatcgc cttgcgccac
     1981 tgcgccgcct cggcaaaagc ctgatcgcga ccgagccccg aggcggcgaa ccggcgcaga
     2041 tacgtcgcca cgttgtcggc gatttcccgc gcgaaccgac g
//
LOCUS       DATCWM010000624         9701 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_420396, whole genome shotgun sequence.
ACCESSION   DATCWM010000624 DATCWM010000000
VERSION     DATCWM010000624.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9701)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9701)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9701
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_420396"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..764
                     /locus_tag="VIQ50_12235"
     CDS             <1..764
                     /locus_tag="VIQ50_12235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006615636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SURF1 family protein"
                     /protein_id="HEY9361197.1"
                     /translation="RSAVNAASAWRGSGFAVPAVFALVAVVIFIGLGSWQLQRKAWKE
                     ALIESLEQRLSAPPVDLPPRERWATLDPADDEFRHVRFSAALLPGADALVYTSGSALR
                     SDVSGAGYWVFAPARLPAGGLVVVNRGFVPQGWQDPAIRDAGSTPANAELVGVMRWPE
                     SRGVFSPKDDPGHNLWFVRDPVAIAAAKGWGDIAPFYIELESPQPANGLPRAGRLRAN
                     LRNEHFQYAITWYGLALVVVTMFVFWVRGRAGRAA"
     gene            948..2363
                     /gene="thrC"
                     /locus_tag="VIQ50_12240"
     CDS             948..2363
                     /gene="thrC"
                     /locus_tag="VIQ50_12240"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008961897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEY9361198.1"
                     /translation="MHYLSTRGEAPTLGFAEAMLAGLARDGGLYVPTAWPRLDAETIA
                     GFAGRPYAEVAVEVIRPFVGDAIPDTDLARMTREAYGRFHHPAVAPLVQFGMSDFILE
                     LFHGPTLAFKDLAMQLLGRLMDEVLTARGERTTIVVATSGDTGGAAVEAFRGRARADL
                     FVLFPHGRISDVQRRMMTTVGDDNVHTLAIEGTFDDCQAMVKGMFNHQAFRDQVRLSG
                     VNSINWARIVAQVVYYFTAAVALGSPRRKIAFTVPTGNFGDVYAGYVALCMGLPIDRL
                     TVATNVNDILARTIATGTYELREVVPTSSPSMDIQVASNFERLLFDIHGRDGRVVRAL
                     MASLAQSGRFALSASALSALRAVFSADRADEDETAATIRTLLRETGHLVDPHTAVGIA
                     VAEKEIRDQSIPMIVLGTAHPAKFPDAVEAASGVRPQLPEWLADLDRRPERVIRMPVD
                     QRAVERHIVSVSRAAHEGAAA"
     gene            2360..3631
                     /locus_tag="VIQ50_12245"
     CDS             2360..3631
                     /locus_tag="VIQ50_12245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEY9361199.1"
                     /translation="MTVEVTRLPTGLVVVTDAMPHLETAALGVWVGSGSRDEQPDEHG
                     ISHLLEHMAFKGTSRRTARQIAEEIEAVGGDLNAATSVETTAYYARVLRADVPLALDV
                     LSDILADPTFDPEELRREQNVIVQEIGASEDAPDDLIWDKLQEIAFPGQPIGRSILGT
                     PATVRSFDRSRLATYLRRNYRGPDMLVVAAGAVEHRAVVAEVESRFATFAGPGPVTPE
                     PARFIGGSRIETRDLEQVHIALAMHGLPHRDPNLPSLQVFTNVLGGGMSSRLFQEVRE
                     QRGLCYAIYAFHAPYSDVGMFGLYAGTDAADLAELMHVVVGEINAAAETINEAEVARA
                     KAQMKAGLLMALESSTARAEQLARQLLNWGRPVPLQELVEKIEAVTVESARAAGRALI
                     ARGRPAIAALGPGPGLESAAMIADSLARRAA"
     gene            3714..4292
                     /locus_tag="VIQ50_12250"
     CDS             3714..4292
                     /locus_tag="VIQ50_12250"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HEY9361200.1"
                     /translation="MAFFRTVSLADQMPAVAGDGVALRTPQMSDWGEWTALREASRDF
                     LTPWEPTWPADDLTRASFRRRIRRYSEDQRNDLAYAFFIFRKHDDVLLGGLTLANIRR
                     GCAQAASLGYWIGALFARQGHMTAAVNAIVPFAFGTLRLHRIEAACIPANVASVRLLE
                     KTGFGREGFARQYLCIDGIWQDHLLFARLKDD"
     gene            4636..5064
                     /locus_tag="VIQ50_12255"
     CDS             4636..5064
                     /locus_tag="VIQ50_12255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361201.1"
                     /translation="MNVAAKTADATAGDLRYQFSFGQTARECAVQGANLSMKVGVQGR
                     VILGPMGGPGQVDVPVRYAVVREGPQPKTVITKFKRISVIVPPAQTHVQFVDIEEGLT
                     FPLPSRSELDAYVVYVGFDEIGDKNEKKPPKTAKKTTTRQ"
     gene            complement(5084..5737)
                     /locus_tag="VIQ50_12260"
     CDS             complement(5084..5737)
                     /locus_tag="VIQ50_12260"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEY9361202.1"
                     /translation="MIIFDCNGVLVDSEQIAAEVAADELARAGIAVTPELMIRYLSGR
                     RPADVFASIEKISQRKLPANFGTTVAKATVKRLRADLRAIAHAAYALTWLRGPKCVAS
                     SSPPERIRASLETTGLARFFKFVFSASDVPNGKPAPDLFLHAAARMGVQPADCIVVED
                     SAAGVTAATAADMTAIGFVGASHAGFQLGEELKSAGARMIVADLRHLKSAVVALRGW"
     gene            complement(5913..6395)
                     /locus_tag="VIQ50_12265"
     CDS             complement(5913..6395)
                     /locus_tag="VIQ50_12265"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195257.1"
                     /note="Produces ATP from ADP in the presence of a proton
                     gradient across the membrane. Subunit B is part of the
                     membrane proton channel; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP F0F1 synthase subunit B"
                     /protein_id="HEY9361203.1"
                     /translation="MFEAEFWVAVAFVVFVGVLGYVGAHTRLLKGIDQRRERIRSELD
                     EARRLKAEAEALLASYQRKQQEAEREAETIVASAKGEAERLAAEAEAKIEEFIARHTK
                     MAENKIAQAEAQALADVRSAAAEVAVAAAETILNRTVKDKVADDLLAKGIADFKAKLN
                     "
     gene            complement(6404..6955)
                     /locus_tag="VIQ50_12270"
     CDS             complement(6404..6955)
                     /locus_tag="VIQ50_12270"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027048.1"
                     /note="Produces ATP from ADP in the presence of a proton
                     gradient across the membrane. Subunit B' is part of the
                     membrane proton channel; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP F0F1 synthase subunit B"
                     /protein_id="HEY9361204.1"
                     /translation="MAQSSAEPVGTVEVPASEHGRGFPPFNAETFASQLLWLALIFVA
                     LYLLMSRIALPRVGSILEVRRQRIEEDLAEAQRFKDASDAAIAAHEKALAEARARAQA
                     LASETRAKAAAAAEARRKEVDTKLNARIAEAEKTIAGTRSAALANVRTIAGEAAGAIV
                     ERLTGIAPATEEVGQAVSNAMKR"
     gene            complement(7013..7243)
                     /locus_tag="VIQ50_12275"
     CDS             complement(7013..7243)
                     /locus_tag="VIQ50_12275"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HEY9361205.1"
                     /translation="MDPTAAKYIGAGIACIGMGGAGVGVGIIFGNYLAAAIRNPSAAA
                     GQFANLIFGFAITEALGIFSLLIALLLLFALG"
     gene            complement(7284..8030)
                     /locus_tag="VIQ50_12280"
     CDS             complement(7284..8030)
                     /locus_tag="VIQ50_12280"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HEY9361206.1"
                     /translation="MDPIHQFEIKNLLPIIHIGGTEIAFTNSALFMLIALALIVALML
                     GATRSRALVPGRLQAVAEMSYEFVADTLRSSTGPEGMKFFPLVFSIFMFILVLNVIGI
                     IPYAFTVTSHIIITVAFALLVFVTVVIYGFWRNGLRFLKLFVPSGIPIYILPLVTAIE
                     VMSFFSRPVSHSVRLFANMLAGHITLKVFGGFVVMLGGLGFLGWLGAALPLALTTALT
                     ALELLVALLQAYVFAILTCIYLNDAVHPGH"
     gene            complement(8090..8458)
                     /locus_tag="VIQ50_12285"
     CDS             complement(8090..8458)
                     /locus_tag="VIQ50_12285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011666153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HEY9361207.1"
                     /translation="MADDPREKEDREQPLADEAALSARLKRLGEELGHVQPGRSGESS
                     PGQPAASDPSAMARGFRLSTELVGGVLVGAAFGWVLDYLLGISPWGLTVFLLLGFAAG
                     VLNVMRVAGAVPSGPLEPKR"
     gene            8756..9223
                     /locus_tag="VIQ50_12290"
     CDS             8756..9223
                     /locus_tag="VIQ50_12290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361208.1"
                     /translation="MIRTGLFVVAGLGLVSSVAWGQTAAPQTDDRRYTFNRVDDGYLR
                     LDGRTGQVSLCLQRPAGWACQAVPDERTALEAEIARLQAENAAIKKELIARNLPLPGT
                     IKPEAPAASPDDPRLQLPNDADLNKVMNFVEKVWRRLLEMMATVHKDLLKKQS"
     gene            9276..9695
                     /locus_tag="VIQ50_12295"
     CDS             9276..9695
                     /locus_tag="VIQ50_12295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="secondary thiamine-phosphate synthase enzyme
                     YjbQ"
                     /protein_id="HEY9361209.1"
                     /translation="MIATATLVVDSSAGSFTEITGEAMRFVSESRAKDGALFLFIRHT
                     SASLVVQENADPDVRRDLVSALDRLVPADAPWVHDVEGPDDMPAHVKTMLTGVSLHTP
                     VVGGALALGTWQGIFIAEHRARTHRREIVLQFIGSRR"
BASE COUNT         1798 a         3038 c         3037 g         1828 t
ORIGIN      
        1 ggcggagcgc cgtgaacgct gcatcagcat ggcggggatc ggggtttgcc gtgccggcgg
       61 tgttcgcgct ggtggcggtc gtaatcttca tcgggctcgg cagttggcag cttcagcgca
      121 aggcctggaa ggaggcgctg atcgaaagcc ttgaacagcg cctttccgca ccgccggtcg
      181 atctgccgcc acgggagcgc tgggcaacgc ttgatccagc cgacgacgag ttccggcacg
      241 tgaggttctc cgccgcgttg ctgcctggcg ccgacgcgct cgtttatacc agcggctcgg
      301 ccttacgcag cgacgtttcc ggagccggct attgggtatt cgcgccggcc cggctcccgg
      361 caggcggcct tgtcgtggta aatcgcggct tcgtgccgca gggatggcag gatccggcaa
      421 tccgtgacgc cggcagcacg ccggctaacg ccgagttggt tggcgtcatg cgctggccgg
      481 aatcccgcgg cgtcttctca ccaaaagatg atcctggcca caatctttgg ttcgtgcggg
      541 acccggtcgc gattgcagcc gccaagggct ggggcgacat cgcaccgttc tacatcgaat
      601 tggagagccc gcagccagcc aacggactgc cccgcgccgg ccgtctcagg gcgaacttgc
      661 gcaacgagca cttccaatat gcgattactt ggtacggcct ggcattggtt gtggtcacca
      721 tgttcgtgtt ttgggtcaga ggccgagcgg gacgcgcggc gtgagcggca tgagggcgct
      781 ttccttgtgg aggcgccgtc ttcccactat gtttgcagcc gttgctttcc ggagcctgac
      841 ctcgttccga gaaatccaac gaagtcaata tgttacctcg tgtctccgcc cggccgcaaa
      901 agccgagcgc aacggcgatc ttggcctcga aacggagccc gcggcgcgtg cattaccttt
      961 ccacccgagg cgaggccccg accctcggtt ttgccgaggc gatgctggca gggcttgccc
     1021 gcgacggcgg cctttacgtg cccactgctt ggccgcggct cgatgccgag accatcgccg
     1081 gttttgccgg ccggccttat gccgaagtcg ccgtggaggt catccggcct tttgtcggcg
     1141 atgccatccc cgacaccgat ctcgcccgca tgacgcgcga ggcttatggc aggtttcatc
     1201 atccggcggt cgctccactc gtgcagttcg gcatgagcga tttcattctt gaactgtttc
     1261 acgggcccac gctcgcgttc aaggatttgg ctatgcagct gctcggccgg ctcatggacg
     1321 aggtgctcac ggcgcgaggc gagcgcacca ccatcgtcgt ggccacgtcc ggggacaccg
     1381 gtggggccgc ggtcgaggca tttcgcggcc gcgcacgagc ggatcttttc gtgctgttcc
     1441 cgcacgggcg catttccgac gtgcagcgga ggatgatgac gacggtgggc gacgacaatg
     1501 tccacacgct ggcaatcgag gggacattcg acgattgcca ggcgatggtg aagggcatgt
     1561 tcaaccacca agcttttcgc gatcaggtgc gactctcggg tgtgaattcg atcaactggg
     1621 cgcgcatcgt cgcgcaggtg gtgtactatt tcaccgccgc cgttgcgctc ggctctccgc
     1681 gccgcaaaat tgccttcacc gttccgaccg gcaatttcgg cgacgtctac gcgggctatg
     1741 tcgcgctctg tatggggctg cccatcgatc gcctgacggt cgccaccaac gtcaacgaca
     1801 tcctcgcgcg cacgatcgcc accggtacat acgagctgcg cgaggtcgtg cccacctcgt
     1861 caccgtcaat ggacatccag gtcgcgtcga atttcgagcg cctcttgttc gacattcatg
     1921 gtcgcgacgg ccgggtggtg cgcgcgctga tggcctccct cgctcaatcg ggccggtttg
     1981 cgctctcggc gtccgcgctc tcggcgctgc gcgcggtgtt ttccgccgac cgggcggacg
     2041 aggacgaaac cgcggcgacg attcgcacct tgctgcgcga gaccgggcac cttgtcgacc
     2101 cccatacggc agtgggcatt gcggtcgccg aaaaggaaat ccgcgatcaa tcgattccga
     2161 tgatcgtgct cggtaccgcc cacccagcca aatttcccga tgccgtagag gcggctagcg
     2221 gcgtgcgccc gcagctgccc gaatggctcg ccgacctcga tcgccggccg gagcgcgtca
     2281 tccggatgcc agtcgaccag agggccgtcg agcgccatat tgtctcggtt agtcgcgccg
     2341 cacacgaagg agctgctgca tgaccgtcga agttacgcgt cttccaaccg ggcttgtggt
     2401 ggtgaccgac gcgatgccgc atttggagac tgctgcgctt ggcgtctggg tcggctccgg
     2461 cagccgcgac gagcagccgg acgagcatgg catctcgcat ctgctcgagc acatggcatt
     2521 caagggaacc tcgcggcgca cggcccggca gattgccgag gagatagagg cggtgggtgg
     2581 cgatcttaac gcggccacct cggtcgagac gactgcctac tatgcccgcg ttctgcgggc
     2641 cgacgtgccg ctcgcgctgg atgtgctgtc cgatatcctt gccgatccca ccttcgaccc
     2701 cgaggagcta cggcgcgagc agaacgtcat cgtgcaggag attggggcgt ccgaggacgc
     2761 gccggacgat ctcatctggg acaagctgca agaaatcgcc ttccccggtc agccgattgg
     2821 ccgctccatc ctcggcacgc cggcgaccgt gcgatcgttc gatcgctcgc gtctagcgac
     2881 ttatctgcga cgtaactatc gcggtcccga catgctcgtt gtagcggcag gcgcggttga
     2941 gcatcgagcc gtggtggcgg aagtggaaag ccgattcgcg actttcgccg ggccgggacc
     3001 cgttacgcct gaaccagcac gcttcattgg cggctctcgc atcgagacgc gcgatctcga
     3061 acaagttcac atcgcgctcg caatgcatgg attgccgcat cgtgatccaa accttcctag
     3121 tctacaggtt ttcacgaacg tgctcggcgg aggcatgtcc tcacgcttgt tccaggaggt
     3181 acgcgagcag cgcggcctct gctacgcaat ctatgccttc catgcaccct attcggacgt
     3241 cggaatgttt ggcctgtacg ccggaacgga tgccgccgat ctcgccgagt tgatgcacgt
     3301 cgtggttggc gagataaatg ctgccgccga aaccatcaac gaggcggaag tcgcgcgcgc
     3361 gaaggcgcaa atgaaagccg gattgctgat ggccctcgag agctcgaccg cccgcgccga
     3421 gcaactcgcg cgccagcttc tgaattgggg ccgtcccgtt ccgctccagg agctggtcga
     3481 aaaaattgag gccgtgacgg tcgagagcgc tcgcgctgct gggcgcgccc tgattgcgcg
     3541 tggtcggccc gccatagccg cgctcggtcc cggtcccgga cttgaaagtg ccgccatgat
     3601 cgccgacagt ctcgctcgcc gggcagcgtg aagtctgatg acggatgaat gagtccaaca
     3661 gcggcgttcc gctgtggctc gtgcgtctgc ttacggtctg gttgctgatc attatggcat
     3721 tcttccgcac cgtcagcctg gccgatcaga tgcccgccgt cgccggcgac ggcgtggcgc
     3781 tacggacccc gcagatgtcc gactggggcg aatggacggc gttgcgggaa gcaagtcgcg
     3841 atttcctcac gccgtgggag ccgacgtggc ccgccgacga tctcacgcgc gcgtcctttc
     3901 gccggcgcat caggcgctat tccgaagacc agcgtaacga ccttgcctac gccttcttca
     3961 ttttccgcaa gcatgacgac gtattgctag gcggattgac gctcgccaac attcgccggg
     4021 gctgtgccca ggcggcgagc ctcgggtact ggatcggagc actcttcgcg cgccaaggtc
     4081 atatgacggc cgcagtgaat gccatcgtcc ccttcgcatt cgggacgctg aggcttcacc
     4141 gcatcgaagc cgcctgcatt cccgccaatg ttgcgtcggt ccggctcctg gagaaaacgg
     4201 gtttcgggcg cgagggcttt gcccgccaat acctgtgcat cgatggcatc tggcaggatc
     4261 acctgctgtt cgcccgtctc aaggacgatt agccgcgttc ggtcggcctt ggggccgcca
     4321 tgaattggtt gatataagct tcaaaaaagc cgggttttgt caaaaagctg agtgaattca
     4381 atgggccggg gaaatgaccg ggagcaaacg cgcggccgat gcggcgccgc ggcgctggtt
     4441 gtgagtgctg cactgctgtc cggctgctcg ctcgcttcga gcgtgggctc gtccgatgac
     4501 tcgccctcat ttaccagccg gttcacgagc ttgttctccg gtgcgacgcc aggcgtcact
     4561 cagccgcatt cgccaacgcc gacggcgccc gaggtcgaat gccctggagt cgatattcgc
     4621 actggcgctt cgaccatgaa tgtcgccgcc aagaccgccg acgcgaccgc cggggatttg
     4681 cgctaccagt tttcgttcgg ccaaaccgcc cgcgaatgcg cggtacaggg cgccaacctg
     4741 agcatgaagg tgggtgttca aggccgcgtc atactcggac cgatgggcgg gccggggcaa
     4801 gtcgacgttc ccgtgcgcta tgcggtcgtg cgcgaggggc cgcagccgaa gaccgtcatc
     4861 accaagttca aacggatttc ggtcatcgtt ccgccggccc agacacacgt tcagttcgtc
     4921 gatatcgagg agggcctgac gtttccgttg ccatcgcggt cggaactcga cgcttatgtc
     4981 gtttacgtcg gctttgacga aatcggcgac aagaacgaga agaagccgcc gaagacggcg
     5041 aaaaagacca caacacggca ataatagaag ggcctggtgc tacctaccat ccacggagcg
     5101 caacaacggc gctctttaga tgtcgcaggt cggcgacaat catccgcgct cccgcggatt
     5161 tgagctcctc gccgagctgg aagcccgcat ggctcgcgcc gacaaacccg atcgccgtca
     5221 tatcagccgc tgtggccgcg gtcacaccag ccgcagagtc ctcgaccacg atacagtcgg
     5281 ccggctgcac gcccatccgt gctgccgcgt gcaagaatag atcgggcgca ggcttgccgt
     5341 tcggcacatc gcttgcggaa aagacgaatt tgaaaaacct cgccaaacct gtggtttcca
     5401 ggctggctcg gatccgctcg gggggcgagg acgatgccac acatttcggc ccccgcagcc
     5461 aggtgagcgc ataggctgca tgcgcaatag cgcgcagatc ggcgcggagc cgcttcacgg
     5521 ttgccttcgc aacggtcgtg ccaaaattcg ccgggagctt acgctggcta atcttttcaa
     5581 tcgaggcaaa cacgtccgct gggcggcgcc cggacaaata gcggatcatg agttcgggcg
     5641 tgaccgcaat ccccgcgcgc gcgagttcgt ctgcggccac ttcggcagcg atttgttcgc
     5701 tatcgaccag cacaccgttg caatcaaaga tgatcaccgt gagcctctca ttagcgcgtt
     5761 acggggcgcg cgcaggcctg acatgctgct cgacgaatcg gaactcaaga aattaggaat
     5821 tgcggccgtg gcaaaagtcg ggcgctgtgc ggcccggaaa tcgtttttgc acaggttgtt
     5881 gattgccggc ccgaacctgc cgagaaaggg acctaattca gcttggcctt gaaatcggcg
     5941 atgcctttgg ccagaaggtc gtccgccacc ttgtctttga cggtgcggtt gaggatcgtt
     6001 tccgctgccg cgaccgcgac ctcggctgcg gcagagcgca cgtccgccag tgcctgagct
     6061 tcggcctggg cgatcttgtt ttccgccatc ttggtgtgcc gcgcgatgaa ttcttcgatt
     6121 ttggcctcgg cttccgcggc gagacgctca gcttcgccct tggcgctagc gacaatcgtc
     6181 tctgcctcgc gctcggcttc ctgctgcttg cgttggtagc tggcaagcag ggcctcggct
     6241 tccgccttga gcctacgtgc ctcatcgagc tccgacctga tgcgctcccg ccgctggtcg
     6301 atacccttga gcaagcgggt atgggccccg acatagccga gcacgccgac aaagacgacg
     6361 aaggcgacgg cgacccagaa ctcggcttca aacatcgatt tcctcagcgc ttcatggcat
     6421 tgctgacggc ctgaccgacc tcttcggttg ccggcgcgat gcccgtcagc cgctcgacaa
     6481 tggcgcccgc agcctcgccg gcaatagtgc gcacattggc cagcgccgcc gagcgggtcc
     6541 cggcgatggt cttctctgct tccgcgatac gggcattaag cttcgtgtcg acttccttgc
     6601 gacgggcctc cgctgccgcc gccgcctttg cccgcgtctc gctggcgagc gcttgcgccc
     6661 gcgcgcgcgc ttccgccaac gccttctcgt gggccgcaat tgcggcatcc gaagcgtctt
     6721 tgaagcgctg cgcctcggca agatcttctt cgatgcgctg gcggcgcacc tcaaggatcg
     6781 agccgacgcg cggcagcgca attcgcgaca tcaagagata aagcgcaacg aagatgagcg
     6841 ccaaccacag cagctgagag gcgaaggtct cggcattgaa cggcggaaac ccgcgaccgt
     6901 gctcgcttgc cggaacctcg acggttccta ctggctctgc actactttgg gccatagctg
     6961 tctccatggg ctgtgccgtg gtcggctagc gcccaggggt ccggtacttc ggtcagccga
     7021 gggcaaacag cagaagcagc gcaatcagca gcgagaagat gccgagcgcc tcagtgatgg
     7081 cgaagccgaa aatcaagttg gcgaactgtc cggccgcggc agacgggttt cggatcgccg
     7141 cggccaagta gttgccgaag atgatgccga cgccgacgcc ggcgcccccc atgccgatgc
     7201 aggcaatacc agcaccaatg tattttgcgg ccgtcggatc catgaggaag ctcctgttcg
     7261 agggttgttt gaaggaacgg tattcaatgt ccaggatgaa ccgcatcgtt gaggtagatg
     7321 caagtcagaa tggcgaagac gtaggcctgc aacaaagcca ccagcagctc gagcgcagtg
     7381 agcgccgtcg tcagagcaag cggcaacgcg gcgccgagcc agcctagaaa tcccaaacca
     7441 ccgagcataa cgacgaaccc gccgaatacc ttcaaggtga tgtgaccagc gagcatgttg
     7501 gcgaacagcc gcacactatg ggagaccggc cgtgagaaga atgacatcac ctcgatcgcg
     7561 gtcaccagcg gcaggatgta gatgggtatc ccgcttggca cgaacagctt gaggaagcgc
     7621 aatccgttcc gccagaagcc gtagatcacg accgtgacga agaccagcag cgcgaacgca
     7681 acggtgatga taatgtggct cgtgaccgtg aaagcatatg gaataatacc tatcacgttg
     7741 agcacaagaa tgaacatgaa gatcgagaac accagcggga agaatttcat gccttccggg
     7801 ccggtggagc ttcgcaatgt gtccgcgacg aactcgtagg acatttcagc gactgcctgc
     7861 agcctcccgg ggactagggc gcgcgaacgg gtggcgccga gcatcaacgc aacgatcaga
     7921 gcgagcgcga tcagcatgaa cagcgccgaa ttcgtgaagg caatctcggt gccgccgatg
     7981 tgaatgatcg gaagcaggtt tttgatctcg aactggtgaa tgggatccat acgcgatcaa
     8041 atcctcagtg ccgcgccgct ataggaggac tctcggcgcg cggcggcgtt catcttttcg
     8101 gttccaatgg gccgctcgga accgcgcccg caacccgcat cacgttgagt acgccggccg
     8161 cgaagccgag gagcagaaac acggtcaatc cccagggtga aattcctagt aaataatcga
     8221 gcacccaacc gaacgccgcg ccgactaaaa ccccgccgac gagctcggtc gagagccgaa
     8281 acccacgggc catcgctgac ggatcggagg ccgcaggctg acccggactg ctctcgcctg
     8341 aacgcccagg ttggacgtgg ccgagttcct cgcccagacg cttgagcctt gcggagagcg
     8401 cagcctcatc ggccagaggt tgttcgcgat cttccttttc gcgcgggtcg tcggccatgc
     8461 tttcgacacc cgcgctgatt tcggcaagat caactccgcc cccaagccgc gcggaccata
     8521 ctgattggga ttatgcaagt caagaattgc ggctccggct aagtacctga aaaagaaata
     8581 gaagagcgcg ctgggcaagg ttggagttga cgctctgaag gaggtggtga tgtgctgcgg
     8641 acgaatgctc tcagggtcat taattccggg agtgttaggc tttggggtac ccgtggcacc
     8701 attgaatcgg tcctgagcga tcgtctattg cacgacaaaa ccaaggagag atcgcatgat
     8761 ccgcacgggt ctattcgtcg tcgctggact aggtctcgta tcgtccgtgg cttggggaca
     8821 aaccgccgcg ccgcagaccg acgataggcg atacacgttc aatcgcgtcg atgacggcta
     8881 tctgcggctt gacggccgca ccggccaagt atcgctctgc ctgcagcggc cggccggatg
     8941 ggcatgccag gcggtgcccg acgagcgtac cgcgctcgag gcggagatcg cgcgccttca
     9001 ggctgaaaac gcagcgatca agaaagagtt gatcgcgcgc aatctgccgc tgcctggcac
     9061 catcaagccg gaggcgccgg ctgccagtcc cgacgaccct cgtctgcaat tgcccaatga
     9121 cgccgatctc aacaaggtca tgaatttcgt cgagaaggtc tggcgccgac tgcttgagat
     9181 gatggcgacg gtccacaagg atttgctgaa aaagcagtca tgaagacgag cttatgcggg
     9241 gctcgttatc tcccatcgac agtgtcgcac ccgagatgat tgcgaccgcg acactcgtgg
     9301 tcgacagcag tgcaggctcc tttaccgaga tcacgggcga agctatgcgc tttgtctccg
     9361 agagcagggc gaaagacggc gcgctgtttc ttttcatccg gcatacgtcg gcctctctgg
     9421 tcgtccagga aaatgcggac cctgacgtgc gccgcgatct tgtgagcgca cttgaccgac
     9481 ttgtaccggc cgatgcccct tgggttcacg atgtcgaggg gcctgacgac atgccggcgc
     9541 acgtcaagac gatgctcacg ggagtctcgc tacacacccc ggtggtcggc ggtgcgcttg
     9601 cgctcggcac ttggcaaggc atctttatcg ccgaacatcg cgcgcggacg caccgccgcg
     9661 aaatcgtgct gcaattcatc ggcagcaggc ggtaatcgcc g
//
LOCUS       DATCWM010000625         3588 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_420406, whole genome shotgun sequence.
ACCESSION   DATCWM010000625 DATCWM010000000
VERSION     DATCWM010000625.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3588
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_420406"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(86..1036)
                     /gene="mepA"
                     /locus_tag="VIQ50_12300"
     CDS             complement(86..1036)
                     /gene="mepA"
                     /locus_tag="VIQ50_12300"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HEY9361210.1"
                     /translation="MEAPGGAPRRRIARCAGALLLAQLLAPAIATAQDKGTLNPHPLP
                     PLAKPDDPATPAKELFGRKTAPANLQARTIGFYSKGCLAGAAALPINGTTWQVMRLSR
                     NRNWGHPNLIAFLERLAAQAPKTGWHGLLVGDMSQPRGGPMLTGHASHQVGLDADIWL
                     TPMPDRELTRQEREEMSATMVVAEDRRDIDPQVWTPAHVALIRAAAKDPQVARIFVNA
                     AIKKALCRDAGSDRHWLNKVQPWWGHDYHFHVRIVCPADSPECAPQAPRPADDGCGAE
                     LDHWFTEAVLHPRPGPPAKPKPGPKLADLPAACRQVLLAP"
     gene            complement(1212..1796)
                     /locus_tag="VIQ50_12305"
     CDS             complement(1212..1796)
                     /locus_tag="VIQ50_12305"
                     /inference="COORDINATES: protein motif:HMM:NF016246.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HEY9361211.1"
                     /translation="MQPYDLLTIGHSNLSAERFMALLASAGVTAVADVRSVPFSRRCP
                     WFSGKALAERLAGERIAYIALGEALGGRPRDSTLYRDGIADYEAMAARPEFAAGLARL
                     IDATSRQRVCLLCAEREPLDCHRCLLVGRALCERGLTLGHIRPDGSIEPHAATEERLI
                     ALAGGEADLFRGSADRLAHAYRRRAHAVAARLKT"
     gene            2274..2567
                     /locus_tag="VIQ50_12310"
     CDS             2274..2567
                     /locus_tag="VIQ50_12310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361212.1"
                     /translation="MKRLITTAVRNGALLAALVAAGSVYAQTRERFEEPGAPASAAPA
                     YADDSCETGKYGPPVRVEPGDVVENGEIVARDPDPNIRTQLEREYSPGGYNEC"
     gene            complement(2613..>3588)
                     /gene="ampH"
                     /locus_tag="VIQ50_12315"
     CDS             complement(2613..>3588)
                     /gene="ampH"
                     /locus_tag="VIQ50_12315"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF007943.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="D-alanyl-D-alanine-
                     carboxypeptidase/endopeptidase AmpH"
                     /protein_id="HEY9361213.1"
                     /translation="DSVVLGFGETRPGSKVEPTGRSILRMGSIAKVMAGQTLASMTAD
                     GTVKLTDPLAKYAPPGAKVPAFAGREITLLDLATYTAGLPRELPDVPDPRPGENPFAH
                     FQADAYWRWLAGATLPYAPGSGAMYSNLGFGLLGEALAKAGGKPYGTLLAERVATPLR
                     MLDTRTKLSDAQTPRAMTGLDLDGKETPLWETPVAMDASGNVFTTGDDMLEWMRWHLA
                     TNQAVGSEVRTIDHAPYRWHDGLKAAVGVSGNDMDALGLGWIISLPKASRPLIMAKSG
                     GLAGFMTYVVLAPTRGVGVFIAVNRLNFSMFEGLQNGANSLLSDLAPR"
BASE COUNT          612 a         1147 c         1226 g          603 t
ORIGIN      
        1 tctcggcggc ttcggccatc gcagccggca atctacagcg ctttgcgccg aagcgaaatg
       61 agccgagcgg ttgcgcgtgg gcggcctatg gcgccagtag tacctgacgg caggcagcgg
      121 gcagatcggc cagcttcggt cccggcttgg gctttgccgg cggaccgggc ctgggatgca
      181 gcactgcctc ggtgaaccag tgatcgagct ccgcgccgca gccgtcgtcc gccgggcgtg
      241 gagcctgcgg cgcgcactcg ggactgtcgg cgggacagac gatccgcacg tggaagtgat
      301 agtcgtgccc ccaccacggc tgcaccttgt taagccaatg gcggtcgctg ccggcgtcgc
      361 ggcacagcgc cttcttgatc gcggcgttga cgaagatgcg ggcgacttgc gggtccttgg
      421 ccgcggccct gatcagggcc acgtgcgccg gtgtccaaac ttgcgggtcg atgtccctgc
      481 gatcttcggc gacaaccatg gtcgccgaca tttcttcccg ctcctggcgc gtgagctcgc
      541 ggtcgggcat gggcgtaagc cagatgtcgg cgtcgagccc cacctgatgg ctggcatggc
      601 cggtgagcat tgggccgccg cgcggctgcg acatgtcgcc gacgagaagg ccgtgccagc
      661 cggtcttggg cgcctgcgcc gcgagccgct cgaggaacgc gatcaggttc ggatggcccc
      721 aattgcggtt gcgcgagagc cgcatcacct gccaggtggt gccgttgatc ggcagcgccg
      781 ccgcgccggc gaggcagcct ttggaataga agccgatggt gcgtgcttgc aaatttgcgg
      841 gggcggtctt gcggccgaac agctccttgg ccggcgttgc gggatcgtcg ggcttggcga
      901 gcggcggcag cgggtgcgga ttaagagtgc ccttgtcctg tgcggttgcg atcgcgggcg
      961 cgagcaactg cgccaacagc aatgcgccgg cgcatcgtgc gatcctgcgc cgaggtgcgc
     1021 cgcccggcgc ctccatcctc gtcatgtgtg catccgatcg agagttccgc cgccccccgc
     1081 ggagccgcgc cggcccgagt cggccgcgcg ttccaacgcg ccgcgtaccc cgcgggattc
     1141 ctcgcgtcaa gcgcaatgcg ggcgagagct ccgcgccctc gggcgggaag gtgacgaatt
     1201 accgtcgccg cttacgtctt caaacgcgct gccactgcgt gcgcgcggcg gcgataggca
     1261 tgggcgaggc gatcggcact gccgcggaaa aggtcggcct cgcccccggc gagcgcgatc
     1321 aggcgctctt ccgtcgctgc gtgcggttcg atcgagccgt cggggcgaat gtgaccaagc
     1381 gtcagcccgc gttcgcagag cgcccggccg accagcaggc agcgatggca gtcgagcggc
     1441 tcgcgctcgg cacacaatag acagacgcgc tggcgcgagg ttgcgtctat caagcgcgcg
     1501 agcccggcgg caaattccgg ccgcgccgcc atggcctcgt agtcggcaat cccgtcgcga
     1561 taaagcgtcg aatcgcgcgg gcggccgccg agggcctcgc ccagcgcgat ataggcgatg
     1621 cgctcgccgg cgagccgctc tgccagcgct ttgcccgaga accacgggca ccggcgcgag
     1681 aacgggaccg agcgcacgtc ggcaaccgcg gtcacgcctg cactcgcgag caaagccatg
     1741 aagcgctcgg cggaaaggtt ggagtggccg atggtcagga gatcgtaggg ctgcattgtt
     1801 gcaacgggtt gatggggcgc tgtctacacg cgtccaggat tagcgcaaga ccggtccaat
     1861 catggcaatt gagacaaagt cggtctctgc cgagtgatta aatttagcgg ttaggtacgg
     1921 gaagctgaaa tgaccgaacg caggataact cagctttttg gattgatctt gggcgctctc
     1981 ttcacgggca ccctgatact caatgccttt gccttctaac tgcagctacc tcaatgaggc
     2041 ggtgtggcgg tgcggcgtgc ccgtattggt agctttgtcg gcgcgtcttc accgctcgac
     2101 cgagcaaaaa atcacaaaca ggaataaggt gcgacgagcg ccgatctcct ataataacga
     2161 ctgaaagtct aaggaaacgc ttcgggctct gcgtcgggcg cgcatctact tctcacggct
     2221 ttggaagaaa cactcgagcc gcaaaccgct ataaccatgc atggagatgc gacatgaaga
     2281 ggctcatcac tacggccgtg aggaacggcg cattgctcgc ggcgcttgtg gccgccggga
     2341 gcgtttacgc gcagacgagg gagcgctttg aggagcctgg cgcgcccgct agcgcagctc
     2401 ccgcctacgc agacgactcc tgcgagacgg ggaaatacgg tccgcccgtt cgcgtagagc
     2461 caggggacgt cgtcgagaac ggggaaatcg tcgctcgcga ccccgatccc aatattcgaa
     2521 cccagctcga gcgggaatac tcgcccggtg gttacaacga gtgctgatgt gcccgcaggt
     2581 cgctggcctt cactcgtcaa cgaggttcgc tgctagcgtg gggccaaatc ggagaggagg
     2641 gagttcgctc cgttctggag cccctcgaac atggaaaagt tgagtcgatt gaccgcgatg
     2701 aagacgccga ccccgcgcgt cggcgccagc accacataag tcatgaaacc ggcaagcccg
     2761 ccgctcttgg ccatgatcag tgggcggctc gccttgggaa gcgagataat ccagccgaga
     2821 ccgagcgcgt ccatgtcgtt gccgctgacg ccgaccgcgg ccttgagtcc gtcatgccag
     2881 cggtaagggg cgtgatcgat cgtgcgcacc tccgagccca cagcctggtt ggtggcaagg
     2941 tgccaacgca tccactcgag catgtcgtcg ccggtggtga agacgttgcc cgaggcatcc
     3001 atcgccaccg gcgtctccca cagcggcgtc tccttgccgt cgagatcgag cccagtcatc
     3061 gcgcgtggcg tctgcgcgtc cgaaagtttg gtcctcgtgt cgagcatacg aagcggcgtg
     3121 gcaacgcgct cggccagcag cgtcccgtag ggcttgccac ctgccttggc gagcgcctcg
     3181 ccgaggagcc caaagccgag attggaatac atcgcgcccg agcccggcgc atacggcagc
     3241 gttgcccccg cgagccagcg ccagtaggcg tcggcctgga agtgcgcgaa cggattttcg
     3301 ccgggccgcg ggtccggcac atccggtaat tcccgcggta ggccggcggt ataggtcgcg
     3361 agatcgagca gcgtgatctc gcgccccgcg aatgccggca ccttggcgcc gggcggcgcg
     3421 tatttggcga gcgggtcggt aagcttgacc gtgccgtcag ccgtcatgct ggcgagcgtt
     3481 tgacccgcca tcaccttggc gatcgagccc atgcgcagaa tggaacggcc agtgggctcg
     3541 actttgctgc ccggccgcgt ctctccgaaa ccgagcacga cggagtcg
//
LOCUS       DATCWM010000626         2845 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_118305, whole genome shotgun sequence.
ACCESSION   DATCWM010000626 DATCWM010000000
VERSION     DATCWM010000626.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2845)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2845)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2845
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118305"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..574
                     /locus_tag="VIQ50_12320"
     CDS             <1..574
                     /locus_tag="VIQ50_12320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="urease accessory UreF family protein"
                     /protein_id="HEY9361214.1"
                     /translation="IADAASLERWLAVMVGEGSGFCDAVFFVHAHRAVTQCDDGALRA
                     VAELAAAFVPSKERHLETTAQGRAFLDATRAAWPAPALDRLLSVWDGALALPVAVAAA
                     AAGHGIALAPALLVYIQALAANVVSAGVRLIPIGQTDGQRVLAALEPIVAATAKRALA
                     TALDEVGGAAFRADLASMRHETQHTRLFRS"
     gene            651..1298
                     /gene="ureG"
                     /locus_tag="VIQ50_12325"
     CDS             651..1298
                     /gene="ureG"
                     /locus_tag="VIQ50_12325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019627 - urea metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreG"
                     /protein_id="HEY9361215.1"
                     /translation="MTNSHGPLRVGIGGPVGSGKTALMDALCKRLRDRYDIAAITNDI
                     YTKWDAEYLVRSGALAPERIAGVETGGCPHTAIREDASINLAALDDMRKKFPTLDLVL
                     IESGGDNLAATFSPELADLTLYVIDVAAGDKIPSKGGPGITRSDLLVINKIDLAPHVG
                     ASLSVMERDARRMRGARPFVFSNLRAGEGVDEIAGFIEEKGGLGATRSPESRTRP"
     gene            1443..2405
                     /locus_tag="VIQ50_12330"
     CDS             1443..2405
                     /locus_tag="VIQ50_12330"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9361216.1"
                     /translation="MKIARRVILGAAITLAAFGQASAQDWPTRSVTVVVPVPAGVASD
                     LIARTVFEQVGKQVGQTFVIENRPGAGGTIGANLVAKAAPDGHTILVYGSIAAANALY
                     ARLPYDTVADFTRVVPFGETPLVVVTAEGRYNTLGELIAAAKAKPGELNYSTVGIGSA
                     AHFGAVRLAVSAGITAQHIPFKGPEWLADTIAGRVDFSVPPVTTVIGPIRDGKLKALA
                     IGAAKRSASLPDVPTLIEAGLKADAIYPFYTGAYLPAQTPRAIVDKLHDEVVKALALP
                     SVQERLATIGVEKLPMTVAEFDQFFKDDVATNLELVKTANIPRQ"
     gene            complement(2473..>2845)
                     /locus_tag="VIQ50_12335"
     CDS             complement(2473..>2845)
                     /locus_tag="VIQ50_12335"
                     /inference="COORDINATES: protein motif:HMM:NF025091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HEY9361217.1"
                     /translation="LERAAAYREAGADVTFVEAPTSTEQISDIPRRLPWPQLINIVIG
                     GRTPELPNAKLKELGYAGVIYANVALQAALKGMQAALGELRRKGHMGEAQNLLADFSE
                     RQRLVQKDEFDVLEHKYSTKD"
BASE COUNT          487 a          930 c          908 g          520 t
ORIGIN      
        1 cattgccgat gcggcaagcc tcgagcgttg gctcgcagtc atggtgggcg agggtagcgg
       61 gttttgcgac gcggtttttt tcgtgcacgc ccatcgcgcc gtgacgcaat gcgacgatgg
      121 cgcgctacgc gcggttgccg agctcgccgc cgccttcgtc ccctcgaaag agcggcactt
      181 ggagacgacg gcccagggcc gcgcctttct cgacgcgacg cgcgcggctt ggccggcgcc
      241 cgcgctcgat cggctgctct cggtctggga cggcgccctc gcgctgccag ttgcggtcgc
      301 cgctgccgcc gccgggcatg gcatcgcgct tgcacccgcg ctgctcgtct acatccaggc
      361 gcttgcggca aacgtcgtgt cggccggcgt gcggctcatc cccatcgggc agaccgacgg
      421 ccaacgcgtt ctcgctgcgc tcgaacctat tgtggcggca accgcgaaac gcgcgctcgc
      481 gaccgccctc gacgaagtgg gcggcgccgc ttttcgcgcc gatctcgcca gcatgcgcca
      541 cgagacgcag catacgcgac tattcaggtc atgatcgctc gacatcctgt aaactcaggc
      601 ccaacgatga ctctgaacga cgacgaacac tggagaacct tgggacggcc atgaccaatt
      661 cccatggtcc gctgcgagtc ggcatcggtg gtccggtcgg ttcgggcaag accgcgctga
      721 tggacgcctt gtgcaagcgt ctgcgcgacc gctacgacat tgcggcgatc accaacgaca
      781 tctacacgaa atgggacgcc gaatatctgg tgcgctcggg tgcgctcgcg cccgaacgga
      841 tcgccggggt cgagaccggc ggctgcccgc acaccgcgat ccgcgaggat gcctccatca
      901 atctcgccgc gctcgacgac atgcggaaga aatttcccac gctcgatctc gtgctgatcg
      961 aatcgggcgg cgataacctg gccgcgactt tctcccccga gcttgccgac ttgacgctat
     1021 atgtgatcga cgtcgcggcg ggagacaaga ttccgtcaaa gggcggtccc ggtatcaccc
     1081 gctccgattt gctcgtgatc aacaagatcg acctcgcgcc gcacgtcggc gcctcgcttt
     1141 ccgtcatgga gcgcgatgcc aggcgcatgc gcggcgcgcg tcccttcgtc ttcagcaatc
     1201 tgcgcgccgg cgagggcgtc gacgagatcg ccggctttat cgaggagaaa ggcggcctcg
     1261 gcgcgactcg aagtccggaa agccgaactc ggccctgaac gaaggcccga cggtcccacg
     1321 ccgactgtag tctcgcatcg caacgagaag acaacgcggc ccggcatgac tgcggctact
     1381 cgcaacattg acgacgctat ccttctctct caatctccgt gcgcgttttg gaggaaatca
     1441 caatgaaaat tgctcgacgg gttatccttg gggcggctat cacgctggcc gcctttggcc
     1501 aggcatcggc ccaggattgg cccacccgca gcgtcaccgt ggtggtgccg gtcccggccg
     1561 gcgtcgccag cgacctcatc gcccgcacgg tgttcgagca ggttggcaag caggtcgggc
     1621 agaccttcgt gatcgagaat cggccggggg ccggcggtac gatcggcgcc aacctggtcg
     1681 ccaaggccgc gcctgacggc cataccattc tggtctatgg ctcgattgcg gcggccaacg
     1741 cactctatgc gcgattgccc tacgacacgg ttgccgattt cacgcgggtg gttccgtttg
     1801 gcgagacccc gctggtcgtg gtgacggcgg aagggcgtta taacacgctg ggcgagctga
     1861 ttgccgctgc gaaggccaag cccggcgagt tgaactattc gaccgtcggc atcgggtccg
     1921 cggcgcactt cggagccgtt cggctcgccg tcagtgccgg aatcacggcg cagcatattc
     1981 cgttcaaggg tcccgagtgg ctggctgaca cgatcgcggg gcgcgtcgac ttcagcgttc
     2041 cgccggtaac caccgtcatc ggtcccatcc gtgacggcaa gcttaaagcg ttagcgatcg
     2101 gcgcagcgaa gcgctccgcc tcgttgccag atgtgccgac gctgatcgag gccggactca
     2161 aggccgatgc gatctatccg ttctataccg gagcatacct gccggcgcag acgccgcgcg
     2221 cgatcgtcga caagctgcac gacgaggtcg taaaagcact ggcattgccg tcggtgcagg
     2281 agcggttggc gacgatcggt gtcgagaagc tgccgatgac tgttgcggaa ttcgaccagt
     2341 tcttcaagga cgacgtcgcc accaatctcg aactggtgaa gacggccaac attccgaggc
     2401 agtaggccat gccggcgatc gattggtagt cgtcacggcg aggaacgcgc caggtctcct
     2461 tcgggaaacg ctctagtcct tggtcgaata tttgtgctcg agcacatcga attcgtcctt
     2521 ctgcaccaag cgctgccgct cggagaaatc ggcgagcagg ttttgcgcct cgcccatatg
     2581 tcctttgcgc cgaagctcgc ccagcgccgc ttgcatgccc ttgagcgccg cttgcagcgc
     2641 gacattggcg tagattaccc cggcataacc caattctttg agcttcgcgt tgggcaattc
     2701 cggcgtgcgg ccaccgatca cgatgttgat gagctgcggc cagggcagac ggcgcggaat
     2761 gtcggagatc tgctccgttg aagtcggcgc ttccacgaaa gtgacgtcgg ccccggcttc
     2821 gcggtaggcg gcggcgcgct cgagc
//
LOCUS       DATCWM010000627         2688 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_20858, whole genome shotgun sequence.
ACCESSION   DATCWM010000627 DATCWM010000000
VERSION     DATCWM010000627.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2688
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20858"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(310..498)
                     /locus_tag="VIQ50_12340"
     CDS             complement(310..498)
                     /locus_tag="VIQ50_12340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361218.1"
                     /translation="MNKTIIRRALIRGLVSFGLFVAQTSAFTQVRPPALELDQVAQFC
                     AATDQSINAPRVYCGNGD"
     gene            complement(595..768)
                     /locus_tag="VIQ50_12345"
     CDS             complement(595..768)
                     /locus_tag="VIQ50_12345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361219.1"
                     /translation="MKTLIAALTLVTLVIGPAFFTSAHAAPRHERGDAAAQNSGGTYH
                     GYPLSEWYRDDGW"
     gene            914..1519
                     /locus_tag="VIQ50_12350"
     CDS             914..1519
                     /locus_tag="VIQ50_12350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007535941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY9361220.1"
                     /translation="MSPSIDVSAEKTERIPPRARILAVARELFYRDGIRAVGVDAIAE
                     AAGTNKMTLYRHFASKDELVADYLRECARLAAANWDRLEAEHPGDPLAQLRGWIARMA
                     ERVANADERGCPLVNAAVELPEKTHPARRVIEEFKTAERAWLIRICSASGLREPELLA
                     DELHLLLEGARVTAQSVGRDRLGERLMRMCDDSITAHAAKR"
     gene            complement(1571..2257)
                     /locus_tag="VIQ50_12355"
     CDS             complement(1571..2257)
                     /locus_tag="VIQ50_12355"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEY9361221.1"
                     /translation="MRMIDLSRELYHRTPTYPGQPPIIHGIWKTHEEAFVESGNVQGN
                     CVMFFSMPDHGGTHIDAPRHFGKSGIPIDEYPLEHCYVKGICLDLRHIAPKAEITPAD
                     LEQAVKASGAAIPERGTVLLCTGHHERTFPTPAYSTDNPGVNVAATEWLARQGIVHFG
                     IDSMRPGPMGVVNSLVHKACLELDITHIESLCNLEALIGEGEFRFIGLPLKWRGGTGS
                     PIRAVAVFEE"
     gene            2485..>2688
                     /locus_tag="VIQ50_12360"
     CDS             2485..>2688
                     /locus_tag="VIQ50_12360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361222.1"
                     /translation="MGAQSSRSRWLAFASVVVVLTIAVAGSDQAQARAKSKRDARPRA
                     IHGPSYHPPYAAIVIDDKSGAVLH"
BASE COUNT          470 a          845 c          879 g          494 t
ORIGIN      
        1 gatgtatctc gcgatctcct ggctggagac cgccgtgatg cgccggcgct agccgacgcc
       61 ccgcgcgggc gtagaaagaa agaaaaaggc atgaagaaac cccgccaaac gaggccactc
      121 gccggcgggg ttagtttcaa gatccgctgg gttcctcccc agcggtgacc ggacttcgtc
      181 gtccggcgca ggcgagatta gcgcgggcat cgatcgcgtc agtgatgacc atcacaaaaa
      241 cctgctttgc gtcgcgcggc gaaacgttgt catatcggtc acgtcgccaa tttcatcttt
      301 cagccgcgct tagtcgccat tgccacaata gacgcgcggc gcattgatcg attggtcggt
      361 tgccgcgcaa aactgcgcga cctgatcaag ctcgagcgcg gggggccgaa cttgggtgaa
      421 tgcgctggtc tgtgcgacga acagaccgaa actcactagt ccccgtatga gcgcgcggcg
      481 tatgattgtt ttgttcatga ttgcacctgc gttacttgct ttgccctgcg cagcaggacc
      541 gaggtccgtt gtcgcgaggg cgcgtcagca cgacgcatct ccatcgcgcc ggcgttacca
      601 gccgtcgtcc cggtaccact cgctgagcgg atatccgtga taggtgccgc ccgagttttg
      661 tgcggcggca tcgccgcgct cgtgacgcgg ggcggcgtgc gccgaagtga aaaaagcggg
      721 accgatgacg agggtgacga gggtgagcgc ggcaatgagc gtcttcatgg tgtctctcct
      781 tgctgccgtc cgcccggtgg cgggccgggg ccgcccgaac gttgcggctt gtgttaccga
      841 cccagttgtg gtactgactg gtaacaccta aataggtact taccggtaac acccttgtca
      901 agaggaaatc gccatgagcc cctcaattga cgtaagtgcc gaaaaaaccg aaagaattcc
      961 gccgcgagcg cggattctcg cggtcgcgcg cgagctgttt tatcgggatg ggattcgcgc
     1021 tgtgggggtc gacgccatcg ccgaggcggc cggcaccaat aagatgacgc tctatcgcca
     1081 ctttgcctcg aaggacgaac tggtggcgga ctacttgcgc gaatgcgcgc gcctcgccgc
     1141 ggctaactgg gaccggctgg aggccgaaca ccccggcgat ccgctcgcgc agctgcgggg
     1201 ctggattgcg aggatggccg agcgcgttgc caatgccgac gagcgcggct gcccgctggt
     1261 caacgccgcc gtcgagcttc cggaaaagac gcatccggcg cgccgcgtca tcgaggaatt
     1321 caagaccgcc gaacgcgcat ggctcatccg gatatgtagc gccagcgggc tacgcgagcc
     1381 cgagctgctc gccgacgaat tgcacctgct gctggagggc gcgcgcgtca ccgcgcagag
     1441 cgtcggccgc gatcgcctgg gcgagcggct catgcgcatg tgcgacgatt cgatcaccgc
     1501 gcatgcggcg aagcgatagc ggtcaagctc ccgcggctcg caatcgggcc gcgcaacctt
     1561 tgcctcggaa tcattcctcg aacacggcca ccgcgcggat cggtgagccg gtgccgccgc
     1621 gccatttaag cggcaatccg atgaagcgaa attcgccctc tccgatcagc gcctcgaggt
     1681 tgcacaagct ttcgatatgc gtgatgtcga gctcgaggca cgccttatgc acgagcgagt
     1741 tcaccacgcc catcgggcca gggcgcatgg agtcgatgcc gaaatggacg attccctgtc
     1801 gcgccagcca ctcggtcgcc gcgacgttga cgcccggatt gtcggtggaa taggcgggcg
     1861 tgggaaaggt gcgttcgtga tgtccggtgc agagcagcac cgtgccgcgc tcgggaatgg
     1921 cggcgcctga cgccttcacc gcctgctcca gatccgccgg cgtgatctcc gccttcggcg
     1981 cgatgtggcg caggtcgagg caaattccct tcacgtagca gtgctcgagc gggtactcgt
     2041 cgatcggaat accgctcttg ccgaaatggc ggggagcatc gatgtgggtg ccgccgtggt
     2101 ccggcatgga gaagaacatc acgcaattgc cctgcacgtt tccggattcg acgaaggctt
     2161 cttcgtgcgt cttccagatg ccgtggatga tgggcggctg gcccggatag gtcggcgtgc
     2221 ggtgataaag ctcccggctc aagtcgatca tgcgcatggc tcgtctcctc ccctcgggct
     2281 gtggttgcgc cgctgcgcgc catcatatcg caacaaccgg cgcccatccc acgcattcca
     2341 gctgtggccg cgtgcgcggc atcgccacat ccgccttggt cagaggcgat tttccgcggc
     2401 ggtgtggcat tcccattaca gccagcgcgg cggattcgcg atttactgac cggcacgatt
     2461 cgcgctcgat caggggggct tgccatgggg gctcagagct cgcgctcgcg ctggctggcg
     2521 tttgccagcg tcgtggtagt gctgacgatt gccgttgccg gctccgacca ggcgcaagcg
     2581 cgggccaagt ccaagcgcga tgcccgtccg cgcgcgatcc atgggccgag ctatcatcca
     2641 ccctatgccg ccatcgtgat cgacgacaaa tcgggcgcgg tgctgcac
//
LOCUS       DATCWM010000628         5123 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_512153, whole genome shotgun sequence.
ACCESSION   DATCWM010000628 DATCWM010000000
VERSION     DATCWM010000628.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5123
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_512153"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1350)
                     /gene="allB"
                     /locus_tag="VIQ50_12365"
     CDS             complement(<1..1350)
                     /gene="allB"
                     /locus_tag="VIQ50_12365"
                     /EC_number="3.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018900982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004038 - allantoinase activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0050897 - cobalt ion binding [Evidence
                     IEA];
                     GO_process: GO:0000256 - allantoin catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="allantoinase AllB"
                     /protein_id="HEY9361223.1"
                     /translation="MSASADLVIRGGKLVTPDAVFEASIAIADGMILAVGADSAMPSA
                     RETLDASGLHVLPGAIDVHVHFRDPGYPHKEDFASGTAAAAFGGVTTVFDMPNTIPPT
                     GTPEILAAKHQMAAQKAHVDFGLYGLLGEDTIAHVPELAKTVIGFKLYMGNTFGKIPT
                     PSTGAMLEAFEVVAATGKRVSLHAETNSIMERRETRLRDAGRVDPLAHLASRPAVVAV
                     EAVSRAATLAEWTGARIHILHISSAEELRPLREAKARGVDITGETCPHYLFLSADDYA
                     RFAGVIRVNPPVREKRNQEPLFAALADGTIDVIATDHAPHAIEEKTRNDIWTVDCGFP
                     GVETQMPMMLTEVAAGRYSVCDYVRWSAANPARIWGLYPRKGAIAAGADADLAIVDLS
                     RESTIDDAKLQSRSRITPFHGRRTRGLPLHTLVRGRFVMRERELVASARGWGRSVHAI
                     "
     gene            complement(1358..2152)
                     /locus_tag="VIQ50_12370"
     CDS             complement(1358..2152)
                     /locus_tag="VIQ50_12370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018900983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9361224.1"
                     /translation="MDLQLKGRVAIITGPVKGMGAAVTHAFAAEGCKLALVGRDTAAI
                     EPLAGEVKARGGDAIVIPCDVTDGEQCCAAARATQTRFGERIDILLNVAGGSGPISRT
                     GVETSEDEFDDIIAVNMRGCFNTMRAVLPAMIAQRYGKIVNVGGTFGMRGRAGRMAYS
                     ASKWGLRGITKSFALEVGVHNINVNYVAPGMVDGPRFRDKVCADMARRLDISLEDAAA
                     LHAADYALKRVSTDVDIANACLFLASDVSRQITGADLPVDGGWAML"
     gene            complement(2230..3285)
                     /locus_tag="VIQ50_12375"
     CDS             complement(2230..3285)
                     /locus_tag="VIQ50_12375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018900984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9361225.1"
                     /translation="MTFHSLRRHLLVLVVAAVGLASFPGNQAGAQTKLKFVLNWKYQG
                     PQGWFFVAEDKGYYKAEGLDVTIDQGDGSAAAVPKVASGTYDIRFGDINALIEFAAKK
                     PQEAPLAVYVMYNRPPFTVAVKTDSPIKTPKDFEGRTLGGAANDGALKLFPALAKIAG
                     FDASKVNITTLAPNLREQMLMRGQVDGVFGYVNTILFSAKLMGVDPGKEMRWINYGDY
                     GMDLYSNAIIVSRKLVNENPQAVRGFLRAMNKGLVDSLKDPKASVEAVLKREPLIQLN
                     VELERFDATIKEEMNHPEIAQIGLGDIDDARMKKGIDILVDANQLPRTPAVSEIFVRD
                     FLPPKSERPTKLVDAKS"
     gene            3532..4434
                     /locus_tag="VIQ50_12380"
     CDS             3532..4434
                     /locus_tag="VIQ50_12380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012321489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEY9361226.1"
                     /translation="MRHLRLLQYVDEVARAGSIRRAAERLNVTASAVNRRIMDLEAEL
                     DTELFERRPRGVRLTAAGETFLRYVRAQSADVERMRSQIEDLKGLRRGVVRIACSQAL
                     APDFLPDEIAKYRVRYPQVAFEVSVLDHERAMRALAAYDVDLVIVFRPPYLANFQPLT
                     KLEQRLVALMTPAHPLASRRAVRLRDCAAYPVALPERSIGGRQLLDEVTARSGLHFNV
                     VAESNSFEFLRGVVLRGGAISFQIQIGAMTSHHPSGVVARSIDDRDLPNADLVLGQLR
                     GRNLPIPSAVFAEQLMRTLDVIRR"
     gene            complement(4495..>5123)
                     /locus_tag="VIQ50_12385"
     CDS             complement(4495..>5123)
                     /locus_tag="VIQ50_12385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008143484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HEY9361227.1"
                     /translation="GRGHLAMTIDQGPDTARYQGIVALEGKSLEHAAHEYFLRSEQIP
                     TRVRLAVAEELRAGENGARHRWRAGGLLLQFLPQSPERSRRADLDPGDVPEGIEVPAA
                     VEDDAWVEGRALVASVEDLELIDPDTSAERLLYRLFNERGVRVFRSRDLQAQCSCSRD
                     RVERMLRSFPQDDRDDMVENGKITVTCDFCNSTYVFAPRDVSEPEHSQ"
BASE COUNT          873 a         1653 c         1666 g          931 t
ORIGIN      
        1 gatcgcgtgc accgagcggc cccaaccgcg cgcgcttgcg accaattcac gctcacgcat
       61 gacgaagcgc ccgcgcacca atgtgtgcaa gggcaggccc ctggtgcgac ggccgtgaaa
      121 tggcgtgatc cgcgagcgcg actgcagctt ggcgtcgtcg atggtcgact cgcggctgag
      181 atcgacgatg gcgagatcgg cgtcggcccc ggccgcaatg gcacccttgc gcggataaag
      241 cccccaaatc ctggccggat tcgcggcgct ccaacgaacg tagtcgcaaa cggaatagcg
      301 gcccgcggcg acctcggtga gcatcatcgg catctgcgtc tcgacgccgg ggaagccgca
      361 atcgacagtc cagatgtcgt tgcgcgtctt ttcctcgatc gcgtgcgggg catggtcggt
      421 tgcaatcacg tcgatggtgc cgtcggcgag ggccgcaaac agcggctcct ggttgcgctt
      481 ttcgcgcacc ggcggattga cccggatgac gccggcaaag cgggcatagt cgtccgccga
      541 caagaacagg tagtgcggac aagtttcgcc ggtgatgtcg acgccgcgcg ccttggcttc
      601 gcgcaacgga cgcagttcct cggccgagga aatatgcagg atgtggatgc gcgcgccggt
      661 ccactcggca agggtcgccg cgcggctcac cgcctcgact gcgaccaccg ccggacgcga
      721 cgcgagatgc gccagcggat cgacgcggcc ggcgtcccgc aagcgcgtct cgcggcgctc
      781 catgatggaa ttggtctcgg catggagcga aacgcgcttg ccggtcgcgg ccaccacctc
      841 gaaggcctcg agcattgcgc cggtcgacgg cgtcggaatt ttgccgaacg tattgcccat
      901 atagagcttg aagccgatga ccgtcttggc aagctcaggg acatgcgcaa tggtgtcttc
      961 gccgagcagg ccgtagagac caaaatcgac atgcgccttc tgggctgcca tctgatgctt
     1021 ggccgccagg atctcgggcg tgcccgtcgg cgggatggtg ttcggcatgt cgaatacggt
     1081 ggtcacgccg ccgaaggccg cggcggccgt accgctggcg aaatcctctt tgtggggata
     1141 gccgggatcg cgaaagtgga catgaacgtc gatcgccccg ggcaagacgt gcagcccgga
     1201 cgcgtccagc gtctcacgcg ctgaaggcat ggcactgtcc gcgccgaccg cgaggatcat
     1261 gccatcggcg attgcgatgc ttgcctcgaa gacggcatcc ggggtgacga gcttgcctcc
     1321 gcggataaca agatcggcgc ttgcgctcac cgcgacctca cagcatcgcc cagccgccgt
     1381 cgacaggcag gtcggcgccg gtgatttgcc gcgacacgtc gctggcgaga aacaggcagg
     1441 cattggcgat atcgacgtcg gtcgacacac gcttgagcgc gtaatccgcg gcgtgcagcg
     1501 cggcggcgtc ctcgagcgag atgtcgaggc ggcgcgccat gtcggcgcaa actttgtcgc
     1561 ggaagcgcgg accgtcgacc atgccgggcg caacgtaatt gacgttgatg ttgtggactc
     1621 ctacttcgag cgcaaaactc ttggtgatgc cgcgcaaccc ccatttggat gccgaatagg
     1681 ccattcggcc ggcgcgcccg cgcatgccga aggtcccgcc gacattgaca atcttgccgt
     1741 agcgctgcgc gatcattgcc gggagtaccg cgcgcatggt gttgaaacag ccacgcatgt
     1801 tgaccgcgat gatatcgtcg aactcgtcct cgctggtctc cacgccggtc ctgctgatcg
     1861 gtccggaccc gccggcgaca ttgagcaaga tgtcgatgcg ttcgccaaaa cgcgtctgcg
     1921 ttgcccgtgc ggccgcgcag cattgctcgc cgtccgtcac gtcacagggg atgacgatcg
     1981 cgtcgccgcc gcgggctttt acctcgccgg cgagcggctc gatggcggcg gtgtcgcggc
     2041 ccaccagcgc aagcttgcag ccctcggcag cgaaggcatg ggtgaccgcg gctcccatgc
     2101 ctttgaccgg tccggtgatg atggcgacac ggcccttgag ttggagatcc atcggcctta
     2161 gcgcagcttg cggctcgttc aaggcggtgc cgtgcggacc gacttcgccg cacgggccac
     2221 cggggcaact tagctcttcg cgtcgaccag cttggtcggc cgctccgatt tcggcggcag
     2281 gaaatctcgg acgaaaattt ccgacaccgc gggcgtacgc ggcaattggt tggcgtcgac
     2341 caggatatcg atgcctttct tcatgcgcgc atcatcgata tcgcccagcc cgatctgggc
     2401 gatctcggga tgattcattt cctccttgat ggtcgcatcg aagcgctcaa gctcgacgtt
     2461 gagctgaatg agcggctcac gcttgagaac cgcctccacc gacgctttgg ggtccttcag
     2521 ggagtcaacc agccccttgt tcatggcacg cagaaagccg cggaccgctt gggggttttc
     2581 attgacgagc ttgcgggaca cgataatggc gttggagtag agatccatcc cgtaatcgcc
     2641 gtagtttatc cagcgcatct ccttgcccgg atcgacgccc atgagcttgg cactaaaaag
     2701 gatggtgttg acgtatccaa atacgccgtc gacctgcccg cgcatgagca tctgctcgcg
     2761 caggttgggc gcaagggtgg tgatgttgac cttcgatgcg tcgaacccgg cgatcttggc
     2821 aagcgcggga aagagcttga gcgcgccgtc gttcgcggct cccccgagtg tgcggccttc
     2881 gaagtctttt ggcgtcttga tcggactgtc ggtcttcacc gccaccgtga agggtggacg
     2941 gttgtacatc acatagaccg cgagcggtgc ttcctgcggc tttttcgccg cgaactcgat
     3001 caacgcgttg atgtcgccaa aacggatgtc gtacgtgccg gatgcgacct ttggaacggc
     3061 ggcggccgag ccatcgccct gatcgatggt gacgtcgagc ccctcggcct tgtagtagcc
     3121 cttgtcttcg gcaacgaaga accagccctg cgggccctga tatttccaat tcaacacgaa
     3181 tttgagcttg gtctgggcgc cggcctgatt gccggggaag cttgcgaggc cgactgcggc
     3241 taccaccagt acgagcagat gccgacgcaa cgaatggaag gtcattggcg cgctcctcat
     3301 gatcatacgg gtgcgacggc tcttccgcgc cggtgcatgg cgcgaaacca ccgcagtgat
     3361 cgtcagtcgg cccggcgacc ggttgatcgg gccgaagccc tgcaactcgc gtgcctcggc
     3421 ggatttcagc cggtccgggc gatgctaggc aaaaacgact gttgccagct actgccgatt
     3481 tcttgctaga gtgttgccga aaaagcatca ctcggcagaa acccgtttgg catgcggcac
     3541 ctgcggcttt tgcaatatgt ggatgaggtc gcgcgcgccg gttcgatccg aagagcggcg
     3601 gaacggctca acgtcacggc ttccgccgtc aatcgccgaa tcatggacct cgaggcggag
     3661 ctcgacaccg agctgttcga gcgcaggccg cgcggcgtcc ggctgaccgc ggccggcgag
     3721 acgtttctgc gctacgttcg cgcgcagtcc gccgacgtgg agcggatgcg atcgcagatc
     3781 gaagatctca agggcttgcg gcgcggcgtt gttcgcatcg cctgcagcca ggccttggcg
     3841 cccgacttcc tgcccgacga gatcgccaag tatcgcgtgc gctatcctca agtcgcgttt
     3901 gaagtctccg ttctcgacca cgaacgggcc atgcgtgcgc tcgccgcgta cgacgtcgac
     3961 cttgtcatcg tcttccggcc gccgtatctc gcgaatttcc agccgctcac gaagctcgag
     4021 caacgcctag tggcgctcat gacccccgcg catccgctgg catcgcgtcg cgccgtgcgg
     4081 ctgcgcgact gcgcggcgta cccggtcgct ttgcccgaac gcagcattgg cggacggcaa
     4141 ttactcgacg aggtgaccgc ccgaagcggg ttacatttca acgtcgtggc ggagtcgaac
     4201 tcattcgagt tcctgcgcgg tgtcgtcctg cgcggcggcg cgatttcgtt ccagattcaa
     4261 atcggagcaa tgacaagcca ccacccaagc ggcgtagtgg cgcgcagcat cgacgaccgc
     4321 gaccttccaa acgccgacct ggtgcttggg caattgcgcg gtcgtaacct gccgatccca
     4381 tcggcggtgt ttgccgaaca actcatgcga acgctcgacg tcatccgacg atgacccgcg
     4441 cttccggcta gctgttccgg cggtccgttc cggccgaagc ctggcccgac tccgtcactg
     4501 cgaatgctca ggctcgctca catcgcgcgg ggcgaacacg taggtcgagt tgcagaaatc
     4561 gcaggtcacc gtgatcttgc cgttctcgac catgtcgtcg cggtcgtcct ggggaaagct
     4621 gcgcagcatg cgctcgaccc ggtcgcgcga gcacgagcac tgcgcctgca ggtcgcggct
     4681 gcggaagacg cgcacgccgc gttcgttgaa cagccggtag agcagccgct ccgccgaggt
     4741 gtcgggatcg atgagctcga ggtcctcgac gctcgccacc agcgcgcggc cttcgaccca
     4801 ggcgtcgtcc tcgaccgccg ccggcacttc aatcccctcc ggcacgtcgc cgggatcgag
     4861 gtcggcgcgg cgcgagcgct cgggcgactg cggcaaaaac tgcagcaaca atccgccggc
     4921 gcgccagcgg tggcgggcgc cgttttcgcc cgcgcgcagc tcctcggcga cggccaggcg
     4981 cacgcgggtg gggatctgct ccgagcgcaa gaaatattcg tgcgcggcgt gctcgaggct
     5041 cttgccctcg agcgcgacga tgccctggta gcgggcggtg tccggcccct ggtcgatggt
     5101 catggcgaga tgcccgcggc cga
//
LOCUS       DATCWM010000629         2269 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_204599, whole genome shotgun sequence.
ACCESSION   DATCWM010000629 DATCWM010000000
VERSION     DATCWM010000629.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2269
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204599"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..492)
                     /gene="minD"
                     /locus_tag="VIQ50_12390"
     CDS             complement(<1..492)
                     /gene="minD"
                     /locus_tag="VIQ50_12390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014891484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HEY9361228.1"
                     /translation="MSKVIVVTSGKGGVGKTTSTAALGAALAQAGQKVAVVDFDVGLR
                     NLDLVMGAERRVVFDIINVVQGVAKMSQALIRDKRLETLWLLPASQTRDKDALTEEGV
                     ASVIKELREKFDWVICDSPAGIERGATLAMRFADAAVIVTNPEVSSVRDSDRIIGLLD
                     SKTE"
     gene            complement(514..1197)
                     /gene="minC"
                     /locus_tag="VIQ50_12395"
     CDS             complement(514..1197)
                     /gene="minC"
                     /locus_tag="VIQ50_12395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018454545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004857 - enzyme inhibitor activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HEY9361229.1"
                     /translation="MRLHGRSLMAFVLSPTAPITEWLTALDKRSGSSPAFFVGRPIIL
                     DLAAVELNESQIGELIAQLAERGIRVMALEGIEANQVGPSFPPVIKRGRATAGEIIPP
                     SSDKSGASARRGVRQEPSSLLVESPIRSGQSIIFPNGDITVLGSVASGAEVVAGGSIH
                     VYGALRGRALAGSMGNARARIFCSKNEAELVSIDGYYRTAEEMDAGLRSRPAQCWLEN
                     RVLAIAALD"
     gene            complement(1408..1578)
                     /locus_tag="VIQ50_12400"
     CDS             complement(1408..1578)
                     /locus_tag="VIQ50_12400"
                     /inference="COORDINATES: protein motif:HMM:NF012601.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361230.1"
                     /translation="MYINVAPCPMCMSAICWSRIDHLYFGCGFSDAFPYEDFALPWEQ
                     RWGIKGDAKFRT"
     gene            complement(1544..1891)
                     /locus_tag="VIQ50_12405"
                     /pseudo
     CDS             complement(1544..1891)
                     /locus_tag="VIQ50_12405"
                     /inference="COORDINATES: protein motif:HMM:NF012601.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0008251 - tRNA-specific adenosine
                     deaminase activity [Evidence IEA];
                     GO_process: GO:0002100 - tRNA wobble adenosine to inosine
                     editing [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="deaminase"
BASE COUNT          406 a          741 c          698 g          424 t
ORIGIN      
        1 ctccgtcttg gagtcgagga gcccgataat gcggtcggaa tcgcgcaccg aggacacttc
       61 cggattggtg acgatgacgg ccgcatcggc gaagcgcatg gcgagcgtcg ccccccgctc
      121 gattccggcg gggctgtcgc agatcaccca gtcgaatttc tcccgcagct ccttgatcac
      181 gctggcgacg ccctcctcgg tcaaagcatc cttatcgcgg gtctgcgagg ccggcagcag
      241 ccacagcgtc tccagccgct tgtcgcggat gagcgcttgc gacattttgg cgacgccttg
      301 caccacgttg atgatgtcga acaccacgcg gcgctcggcc cccatcacca gatcgaggtt
      361 gcgcagcccg acgtcgaaat caaccaccgc gaccttctgc ccggcttgcg ccagcgcagc
      421 gccgagcgcg gcggtcgacg tcgtcttgcc gacgccgccc ttgccggacg tgactacgat
      481 gactttggac atgcttgctg tttcccccat ctttcaatcc aacgctgcta tcgcaaggac
      541 gcggttttcg agccaacatt gcgccggccg gctgcggagg cctgcgtcca tttcctcggc
      601 cgtccggtaa taaccatcga tcgagaccag ctcggcctcg ttcttgctgc aaaagattcg
      661 cgcccgcgca ttgcccatcg atccggccag ggcgcgtccg cgcagcgcgc cgtagacatg
      721 gatcgagccg ccggcgacca cttcggcgcc cgaggccact gagccgagca cggtgatgtc
      781 gccgttgggg aagatgatgg attgccccga gcggatcggg ctttcgacca gcaacgagct
      841 cggttcctgg cgcacgccgc gccgcgcgct cgcgccgctc ttgtcggagg agggcgggat
      901 gatctcgccg gccgtcgcac gcccgcgctt gatcaccggc ggaaacgagg gaccgacctg
      961 gttcgcctcg atgccctcga gcgccatcac ccggataccg cgctcggcta attgcgcgat
     1021 cagctcgccg atttgcgact cattcaattc gaccgccgcg agatcgagaa tgatcggccg
     1081 gccgacgaaa aacgcgggcg agctgccgct gcgtttgtcg agcgccgtga gccattccgt
     1141 gatcggtgcc gtcggggaaa ggacgaaggc catgagcgag cggccatgca gtcgcatcgc
     1201 tccttgcggt cgaacggcaa tcgcgtttgt caccagggcc tcggagattt tgccgggggc
     1261 acatccgatt agcgcgctcc gtggttaatg aagacttaag aggcgcgcat ttatccgcat
     1321 aggcgacaat gggcccccgc ggcggcgcct tagtacggat ggcggtccgg cttgtcgttc
     1381 caagcgcggt aggcccgcag gccagcctca cgttcgaaat ttggcgtcac cttttatgcc
     1441 ccatcgctgt tcccacggca gcgcgaagtc ttcgtacgga aaagcatcgg agaagccgca
     1501 accgaaatag agatggtcga tgcgagacca gcagatcgca ctcatgcaca tcgggcacgg
     1561 cgcgacgttg atgtagatct cgcacctttg agcatgcgtg cgcgctctga cacaaaaccg
     1621 gcgagccggg cggacgcgcg atcatctcga ggacggtgcc cgcgtgatag tcgctgccaa
     1681 gcagcatcgt tgggttgagt cggcttgacg catcgatgat cggcgtgatc tcggcgtgga
     1741 agaccgggca tccggtaagt agaacgcggt tctgcccacg cccgataatt tcgccgtcct
     1801 tgacgatcac ggccccgaac ggcccgcccc agcccttctc gaccgcctcg attgccaacc
     1861 gggttgcctc ttccatgaat ttacggttca ttgcgagcgt ccttgcttac gtcgggcgat
     1921 gctggcaggc tcaacgagcc caccatatat cgttagttag agtccccccg cggggaagca
     1981 tgcggtaagc tgtgcgctgg gctgcaccga tcgacaaaac gagaaaggcc cgctcgccca
     2041 gagccgcttg acagcctcgg ctaacttgag cggtttgtct cagcgctccc cgttgcggcc
     2101 atccgcaagg cgcgcgtcga gttcgatgag acaccatcaa agtcggcgtg gcaaacacgg
     2161 cagctggcat agtgtggtgc ggctcgccat tcctcgcatg ggagaaactc gtgaagcatg
     2221 cttcgttaat cgtccgcagc atcggtctca tgatcccggc tcttgcagc
//
LOCUS       DATCWM010000630         2989 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_58509, whole genome shotgun sequence.
ACCESSION   DATCWM010000630 DATCWM010000000
VERSION     DATCWM010000630.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2989)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2989)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2989
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58509"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..599)
                     /locus_tag="VIQ50_12410"
     CDS             complement(<1..599)
                     /locus_tag="VIQ50_12410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase"
                     /protein_id="HEY9361231.1"
                     /translation="MPISFSSPMSRDSSARGAGVTAVLGPTNTGKTHLAIERMLAHSS
                     GIIGLPLRLLAREVYNKVSARAGADAVALVTGEEKIKPPSPRYWVSTVEAMPRDLEVA
                     FLAIDEVQLGADLERGHVFTDRILNRRGREETLVLGAQTVRPMIERLLPGAHILTRPR
                     LSQLSFAGEKKITRLPRRSAVVAFSAEEVYSIGELIRRQR"
     gene            complement(1374..2225)
                     /locus_tag="VIQ50_12415"
     CDS             complement(1374..2225)
                     /locus_tag="VIQ50_12415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HEY9361232.1"
                     /translation="MRSYRLNRAILLSLIAVGIAMAEAPQRRASAQGKLDARYVVTLS
                     GLPIGQGAWVIEIGDDSFTASASGATAGLLRVFASGQGQSAARGAISGGQLVPSTYAS
                     HIVTDQKTDDVRMVLSGGAVKELAANPPTVASPDRVPVTEAHRRGVSDPMTATLIRVP
                     GNGDMLGPQACQRTLSIFDGRMRYDLQRAFKRLDRVTSERGYQGVAVVCAVSFSPIAG
                     HVRDRYAIQYLAQLRDIELWLAPIANTRVLVPFRVTLPTPLGLGVLQATQFVSMPQPS
                     RATARTQ"
     gene            2549..2842
                     /gene="rpmB"
                     /locus_tag="VIQ50_12420"
     CDS             2549..2842
                     /gene="rpmB"
                     /locus_tag="VIQ50_12420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HEY9361233.1"
                     /translation="MSWRCELTGKGAQVGHKVSHSNIKTKRRFLPNLLNVTLISDALG
                     RSVKLRVSANALKTVDHRGGLDAFLLKARDGDLSERALELKRQIRKKKAAVAG"
BASE COUNT          571 a          919 c          990 g          509 t
ORIGIN      
        1 cgctggcgac ggatcagctc gccgatggaa tacacttcct ccgccgagaa tgcgacgacc
       61 gcggagcggc gcggaagccg cgtgatcttc ttctcgccgg cgaatgaaag ctgcgacaac
      121 cgcggccggg tcaggatatg agcgccgggc aggagtcgtt cgatcatcgg ccgcacggtc
      181 tgcgccccga gcaccaacgt ctcctcccgc cctcgccggt tgaggatgcg atcggtgaag
      241 acgtgtccgc gctcgagatc ggcgccgagc tgcacctcgt cgatggccag gaacgcgacc
      301 tcgagatcgc gcggcatggc ctcgacggtg gagacccaat aacgcgggct gggcggcttg
      361 atcttctcct cgccggtaac gagggcaacc gcatccgcgc cggcacgcgc cgagaccttg
      421 ttgtaaacct cgcgcgccag cagccgcagc ggcagcccga tgatgcccga cgaatgggcg
      481 agcatgcgtt cgatggcgag atgggtcttg ccggtattgg tcggaccgag caccgcggtc
      541 acaccggcac cgcgcgcgct ggaatcgcgg ctcatgggag aggagaagga aattggcatc
      601 gatgatcggg cgatgactga cgttgccgcc gcgtgatgct atccagcagc cttctgcata
      661 aagcgtggca agcgctcaaa ggatagcaga tgagagttcg cgccgcgcct ttagctcgtg
      721 cggtcggcgc aagcagcgcc tggagccgtg cgcacctcgt tcgcgcagga tacctgctcc
      781 cgccatgccc ggcaaacgct gtgcgggctg gacggctagc gggaagtgct tcgagatctt
      841 ggaagttccg attgaatttc catcacatgc aacgcccttt atgaggcatg cgtcggggac
      901 gcaaatggac cgtgagataa tgcccgcacg ctccgcgcgc agctcggcgg cgccgccaga
      961 taccttcttc tcgcgcgagc agtgcagtgc gcaacccaag gtgcgccagc gcacagaaat
     1021 cgccgcgagg cgatcgacga gacgctagac agcagccagc ctcgatggag caacccggac
     1081 cgcgcgaagg acgcgagatc caccaccgca cattgccgga tcaccgcatt accgggccgg
     1141 ggaaagccgg tgattaagct gtggaacgag tcccgaacga atcgcgcccg aatcgctgac
     1201 tctgttgctg tcggaattcg ttcacggcga catctggtgg tagcctccgt gctcaccaca
     1261 aaatcaggta aacaccgaca aagcggcacc gcatgcccct ggggacatcg gttaacgggg
     1321 ggcgcgaccg gcacatccga cctttgaata ggccgggccg ctctcggatg cggtcattgc
     1381 gtccttgcgg tcgcccggct cggttgcggc atagagacga actgggtcgc ttgcaaaact
     1441 ccgaggccga gcggggtcgg aagcgtcacg cggaagggga ccaacacgcg cgtattcgcg
     1501 atgggggcga gccagagctc gatgtcgcgc aattgcgcga gatattggat cgcatagcga
     1561 tcgcgaacgt gccccgcgat tggcgaaaag gacaccgcgc agaccacggc gacgccttgg
     1621 tagccacgct ccgaagtgac ccggtcgagg cgcttgaagg cgcgctgaag gtcgtagcgc
     1681 atgcggccat cgaagattga cagcgtgcgc tggcacgctt gcgggcccaa catgtcgccg
     1741 ttgccgggca cccgaattaa agttgccgtc atcgggtcgg agaccccgcg gcggtgagcc
     1801 tccgtcaccg gaacgcgatc cgggctggcg accgtcggcg gattggccgc cagttccttc
     1861 acggcgccgc cgctgagcac catgcgcacg tcatcggttt tctggtcggt gacgatgtgc
     1921 gaggcgtagg tcgacggcac gagctggccg ccggaaatgg cgccgcgcgc ggcactctgg
     1981 ccttggccgc tggcgaagac gcgcagcagg ccagccgtcg caccgctcgc cgaggcggtg
     2041 aaggaatcat cgccaatctc gatcacccaa gcgccttggc cgatcggcag gccactcaag
     2101 gtgacgacgt agcgggcatc gagcttgcct tgggcagaag cccgccgctg cggcgcctcc
     2161 gccatggcta tcccgaccgc gatcaagctg agcaaaatcg cgcggttgag gcggtatgag
     2221 cgcacgaacg aagcccctgc tgttggcgcc atttctttat tgaacccgcg ggaccatggc
     2281 tagtcgctat ttccggcgca atcggcagcc ggcacgggtg ggtttgaact tttggcgggg
     2341 catcttggcc cgatcaaggc ggtcttgtgc catttcggcg ttgcgccgct agctgatcgc
     2401 tcgatgctgg gcgatgtcac tgaagggtgc gggttgacgc ctttttcttg tctctttata
     2461 ggtccgccgg cccgcaaacg ggcccccggt gctcgaagca tcgcgccaag gcgcttgctc
     2521 ggcaatctct tgaaagcagg atttctcaat gtcgtggcgt tgcgaactga ccggcaaggg
     2581 tgcgcaggtt ggacacaagg tgagtcattc gaacatcaag accaagcggc gattcctgcc
     2641 caatctgctc aacgtcactt tgatctcgga cgcgctcggc cgctcggtca aattgcgcgt
     2701 gtcggcgaac gcgctgaaaa cggtcgatca tcgcggcggg cttgatgcct tcttgttgaa
     2761 ggcaagagac ggcgatctgt ccgagcgggc cctcgagctc aaacgtcaga tcaggaagaa
     2821 gaaggctgcg gtggcgggct gagcccggcg ccatgctcgc gaaaacggca gcatcgttca
     2881 gcgaatgacg actggtcagg attagggctc tgccagcgcg aactgcaaca gcagcgtgcg
     2941 ctgaatcacc gagaaattgt cgtcggagac gagcgtgagg acgatttcg
//
LOCUS       DATCWM010000631         4122 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_139549, whole genome shotgun sequence.
ACCESSION   DATCWM010000631 DATCWM010000000
VERSION     DATCWM010000631.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4122
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139549"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..981)
                     /locus_tag="VIQ50_12425"
     CDS             complement(<1..981)
                     /locus_tag="VIQ50_12425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9361234.1"
                     /translation="MREEHTPLVVAALALALLPFALDLAGLPLRSAIDVVVFAIACMG
                     LNVLLGHTGLVSFGHGAWFGLGAYAAALSQRYWFPGAIILPFLFAILFVASAALLSGA
                     LILRRRGVYFSLLTLALTALLFAIGYRWTELTGGESGLGGVTRANVLGLDLESDRVYY
                     WAVAAIGMAVCYLLWRFHRSPVGTVLVAIRENEQRARFLGYPTNRYKLIGFVLSAAVV
                     AIAGTLSVFNHRFASAEPLAVSFSGELVAMVVIGGMRSFLGPALGALFFILFREFLSI
                     WTPHWLFYFGLLFVGFIVFSPTGLVGVAGRIMEPFRKRTVEAAAMAGRQAA"
     gene            complement(987..1862)
                     /locus_tag="VIQ50_12430"
     CDS             complement(987..1862)
                     /locus_tag="VIQ50_12430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020091907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY9361235.1"
                     /translation="MQLIFILEQVLNGLLVGAYYLLIALGLSLIFALGGIVNLAHGGF
                     YAIGAYLAVILAGRIGFAGALVISPVAVGVIGIAVERLLFRRFYRSDPILSLLLTFGL
                     AMVIEQGLRIVFGATPLPFSIPPELRGQIFIGDFIYSRYRLIILAVAAAAVTATWFIV
                     YRTAFGRVVRAGVQNPDVVGALGISLAPYMTAIAALGVGLAGLAGVLLAPISGVHPAM
                     GAEILTAAFVVVVIGGLGSFWGVIAAALLVGVVRGVTIYFNPSWGEASMYLLMALVLL
                     VRPRGLFGERIQKFE"
     gene            complement(2028..3269)
                     /locus_tag="VIQ50_12435"
     CDS             complement(2028..3269)
                     /locus_tag="VIQ50_12435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9361236.1"
                     /translation="MTSRLSRRTLIKNTAGSAVLAGVSMPAIVRAQADTIRIGHLTPL
                     TGFLGPLGEYAIMGVKLAADEINNSGGVMGRKIELVMEDSVNPQTASAKAERLIERDK
                     VAMIIGEISSASGLAIGQVANRLKTVYINTGCNSDALRGSSCNPYMFHIEGANSMYVM
                     AVGQYLLRENLVRGKKWYSLTADYAFGHDLLRVARKFMEANGGQFAADELVPTDATDF
                     SPYLLKVRQARPDLVVSNLAGNQITSFLKQYSEYGLPFPVAGFGFDTVVAWGAGKGNF
                     SGIWPLVWHHLVDTPSSKKYVEVFQKKYGKLPDNQSWGDYNSLKIVAQSMAETKSTDP
                     QKLAEHLRKGAKFDVMKAREAYFRPYDNQMVMEMYAVRAKDPTKMKDQWDIYDALGTV
                     PGPNEDMEVIAPPKDGSCKIG"
     gene            3430..3918
                     /locus_tag="VIQ50_12440"
     CDS             3430..3918
                     /locus_tag="VIQ50_12440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEY9361237.1"
                     /translation="MSDKVDIKLNINGHDFAVRVEPRKTLVDVIRDECGLTGTHIGCE
                     HGVCGACTVILDNDAIRSCLMFAVQAQGKRIRTVEGLADGDNLHPVQSAFIEHHALQC
                     GFCTPGFLMLTVNALETNPDLTDDDILDLLSSNLCRCTGYQNIVKAVRSTVAEMRRSP
                     AR"
BASE COUNT          849 a         1295 c         1301 g          677 t
ORIGIN      
        1 ggcggcttgg cgtccggcca tagccgccgc ttcgaccgtg cgcttgcgga acggctccat
       61 gatgcgtccg gcgacgccga cgagcccggt cggagagaat acgatgaagc cgacgaacaa
      121 caggccgaaa tagaacagcc agtgcggcgt ccagatcgac aggaattcgc gaaagaggat
      181 gaagaacaac gcgccgagcg caggcccgag aaagctgcgc atcccgccga tcaccaccat
      241 cgcgaccagc tctcccgaga acgacacggc gagcggctct gccgaggcga agcggtgatt
      301 gaacaccgac agtgtgcctg cgatcgccac cacggcggcc gatagcacga agccgatcag
      361 cttgtagcgg ttggttggat agccgaggaa acgcgcgcgc tgctcgttct cgcggatcgc
      421 caccaacacg gtgccgactg gcgatcggtg aaagcgccag agcagatagc acacggccat
      481 cccgatcgcc gcgacggccc aatagtagac gcggtcggat tcgagatcga ggccgagcac
      541 gttcgcacgg gtcacaccgc ccaggccgct ttcgccgccc gtgagctcgg tccagcggta
      601 gccgatggcg aagaggagcg cggtcagcgc cagcgtgagc agcgaaaaat agacgccgcg
      661 ccgccgtaga atgagcgcgc cggaaaggag cgcggccgag gccacgaaaa ggattgcgaa
      721 caggaagggc agaatgatcg cgcctggaaa ccagtagcgc tgactcagcg ccgcggcata
      781 cgcgccgagc ccgaaccatg cgccgtggcc gaacgatacc agcccggtat ggccgaggag
      841 cacgttgagc cccatgcagg cgatagcgaa tacgaccaca tcgatcgccg accgcagcgg
      901 cagcccggcg aggtcgagcg cgaagggaag cagcgcgagc gcgagcgccg caacgacaag
      961 cggggtatgt tcctcgcgca ttgcggctac tcgaattttt ggatgcgctc gccgaacagg
     1021 ccgcgcggcc gcaccagcag caccagcgcc atcagcagat acatcgaggc ttccccccag
     1081 gacgggttga agtagatggt gacaccgcgc acgactccga ccagaagggc ggcggcgatc
     1141 acgccccaga acgagcccaa gccgccgatc acgaccacga cgaaagccgc ggtgaggatc
     1201 tccgccccca tggccgggtg cacgccggag atcggggcga gcagcacgcc ggcaagcccg
     1261 gcgagcccga cgccgagcgc ggcgattgca gtcatgtacg gcgcgagcga aatgccgagc
     1321 gcgccgacca cgtcggggtt ctgcacgccg gcgcgcacga cgcggccgaa cgccgtgcgg
     1381 tagacgatga accacgtcgc cgtgacggcg gccgcagcca cggccaagat gatgaggcgg
     1441 taacgcgagt agatgaaatc accgatgaag atctggccgc gcagctcggg cgggatcgag
     1501 aacggaaggg gcgttgcgcc gaacacgatg cgcagaccct gctcgatcac catcgcaagt
     1561 ccgaaggtca acagcaggct caagatcggg tcggaccgat agaagcggcg aaacaacaac
     1621 cgctcgacgg cgatgccgat cacgccgacc gcaacgggcg aaatgacaag cgcgccggcg
     1681 aacccgatcc gtcccgctag gatcaccgca agataggcgc cgatcgcgta gaagccgcca
     1741 tgcgcgaggt tgacgatgcc cccgagcgcg aagatcagcg acaagccaag cgcgatcagc
     1801 aggtaatatg cgccgaccag gagcccgttg agaacctgtt cgagtatgaa aatgagctgc
     1861 acgcggccac tcccggcagg ggcactagcg ccgttgatca gctcatttct gccgtccccg
     1921 cgcaagcggg acagatgctg caaagccggt ggtcatgccg ccccagcgac gccagggtcc
     1981 gggggtggca cgccgaattg atcgcgtggt aatccgccgc gattttctca cccgatcttg
     2041 cagctgccgt ctttcggcgg ggcgatgacc tccatgtcct cgttgggacc ggggacggtg
     2101 ccgagcgcgt cgtagatgtc ccactgatcc ttcatcttcg tcggatcctt ggcgcgcaca
     2161 gcatacatct ccatgaccat ctgattgtcg tacgggcgaa aatacgcttc gcgcgccttc
     2221 atcacgtcga acttcgcgcc cttgcgcaga tgctctgcaa gcttttgcgg gtcggtagat
     2281 ttggtctccg ccatcgactg cgccacgatc ttgagcgagt tgtagtcgcc ccatgattga
     2341 ttgtcgggaa gtttgccgta tttcttctgg aagacttcga cgtatttctt cgagctcggc
     2401 gtatcgacga ggtgatgcca caccagcggc cagatgccgg aaaaattacc cttgccggcg
     2461 ccccatgcga ccacggtgtc gaagccgaac ccggcgaccg ggaacggcag gccgtattcg
     2521 gaatactgtt tgaggaagct ggtgatctgg ttgccggcga gattcgaaac cacgagatca
     2581 ggccgtgcct gacggacctt caggagatag ggagaaaagt ccgtggcatc ggtcggcacc
     2641 agctcgtcgg cggcgaattg accgccgttc gcctccatga acttcctcgc aacgcgcagc
     2701 agatcatgac caaaagcata gtccgccgtg agcgagtacc acttcttgcc ccgcaccagg
     2761 ttctcgcgca gcaagtattg gcccaccgcc atcacgtaca tcgagtttgc gccctcgatg
     2821 tgaaacatgt acgggttgca acttgagccg cgcagagcgt cggaattgca gccggtgttg
     2881 atgtacacgg tcttcagacg gtttgcgact tgaccaatgg caagtccgga tgcggacgag
     2941 atttcgccga tgatcatcgc gactttgtcg cgctcgatca ggcgctcggc tttggcggag
     3001 gcggtctgcg ggttgaccga gtcttccatc acaagctcga tcttgcggcc catcaccccg
     3061 cccgagttgt tgatctcgtc ggcggcgagc ttgaccccca tgatcgcgta ttcgccgagc
     3121 ggcccgagaa agccggtgag cggtgtgaga tgtccgatgc ggatcgtatc ggcttgggcg
     3181 cgcacgattg ccggcatgct gacgccggcg agcacggccg agccggccgt gttcttgatg
     3241 agcgtgcgac gtgacagacg ggacgtcatg ggtactcctc ccttcgcagc gtttcctgcg
     3301 ctttcagcga ccgcgcgttt tgcatccatc ggcgttcgcc gcgtttagtg cgtctccctc
     3361 ggctttactt gccacaaaat gcatgtatca ctcaagcact cgggcaggcg cgccggcgaa
     3421 ataccagcga tgagcgacaa ggtcgatatc aagctcaaca tcaatggcca cgacttcgcc
     3481 gttcgagtcg agccgcgaaa gacgctggtt gacgtgatcc gcgacgaatg cgggctgacg
     3541 ggaacgcata tcggttgcga acatggcgtg tgcggcgcat gcaccgtgat cctcgacaac
     3601 gacgcgatca gatcctgcct gatgttcgcg gtccaggccc agggcaagcg catccgcacc
     3661 gtcgaaggtc ttgccgacgg cgacaatctg catccggtgc agagcgcatt catcgagcac
     3721 catgcgcttc agtgcgggtt ctgcacgccg ggtttcctga tgctgacggt gaacgcgctg
     3781 gaaaccaatc ccgacctcac cgacgacgac atactcgatc tcctctcttc caatctttgc
     3841 cgttgcactg gttatcagaa catcgtcaaa gccgtgcgca gcaccgtcgc cgagatgcgt
     3901 cggtcacccg cgcgctagct gcggcatccg ggtcggcaac ctcgccaagc aagatttgaa
     3961 ggaccgcgtg ccgatcgaca ttcatgctca ttacgtcccg ccgcagctga tcgaggcaat
     4021 cgaggcgcgc ggcaaagaga ttggggtgcg gctggcgcat tccgccggtt cgacgccggc
     4081 gctgaatttc gattacggct tcaaggtgcg gccgttcttt cc
//
LOCUS       DATCWM010000632         2268 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_47825, whole genome shotgun sequence.
ACCESSION   DATCWM010000632 DATCWM010000000
VERSION     DATCWM010000632.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2268)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2268)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2268
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47825"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(76..1668)
                     /locus_tag="VIQ50_12445"
     CDS             complement(76..1668)
                     /locus_tag="VIQ50_12445"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HEY9361238.1"
                     /translation="MQENFRQFLDRLRQNGELADLHQPVDIRHVATLVDQADTALYFH
                     NVIGYEMPVVSGLIRTRERSMTALGCESYREIEDKLTQAINHPIPPKYVKTSPTREVV
                     VIGDEVDLYKLPIPMSSIFDGGPMITAGVVITRDPELGINSGIYRFIVKEKSLTGIDI
                     VTPNNMRLFAQRAYESGRPLPISISIGTHPIEITGSGYRAPLGVDEMAIAGGLRGAPV
                     ELAPCETIDLPYVADAEIVLEAEILPTGWTWPEGRFGEFTRLMGGLHWNPLVRIKAIA
                     RRKDAIYYNLHMPWENTWLAAPTRYAAIRQALRTAGVQVKDINVTLGGCAFWHAVISI
                     KKQPGEAKNALLAALSVMDLKHVVVVDDDIDVFDPTEVEWAIATRVQGDKDVMVVSNA
                     RAKPLDPSLPQGYGVVPTGAKVGIDATIPEGIPREYYERITYAYADRAKIADYVKGKP
                     DTAGLAGDDVEVAALASKILDTIGKEPLYYTEIAERFCAYDFRTVARALGHLHATEKL
                     WQDPRGRMCVRGSAFAAKPPRR"
     gene            1785..>2268
                     /locus_tag="VIQ50_12450"
     CDS             1785..>2268
                     /locus_tag="VIQ50_12450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEY9361239.1"
                     /translation="MKALVLRKHGGLEELAVVNDHPLPVAVPGHVMIRVRASSFNYHD
                     VFTVRGMPGIKVPLPVVLGLDLAGEIAEIGANVTGWTAGQRVLVNPLNKAKGLMGEML
                     DGGMAEYCLVAADQLIAMPPGVSFEDAAALPVAYGTAHRMLITHDTVKAGDRVLVLGA
                     S"
BASE COUNT          380 a          739 c          741 g          408 t
ORIGIN      
        1 ccggccagag cgggcgcacc tgccgtcaaa atagacatcc gcccaattgc taggcagaag
       61 gaaccgtgcc cgcgttcacc gccttggcgg cttggcggcg aacgcagatc cgcgcacgca
      121 catgcgtccg cgcgggtcct gccacagctt ctcggtcgcg tgcagatggc cgagcgcgcg
      181 cgccaccgtg cggaagtcgt aggcgcagaa gcgttcggcg atctcggtgt agtacagcgg
      241 ctccttgccg atcgtatcca aaatcttgct ggccagtgcg gcgacctcga cgtcatcgcc
      301 ggccaaccct gccgtatccg gcttgccctt cacatagtcg gcgatcttcg cccgatcggc
      361 gtaggcgtag gtgatgcgct cgtaatattc ccgcggaatg ccctccggaa tagtagcgtc
      421 gatgccgacc ttggccccgg tcggcaccac gccgtagccc tgcggcagac tcggatcgag
      481 cggcttggcg cgcgcattgc tcaccaccat cacgtccttg tcgccttgaa cgcgggtggc
      541 gatcgcccat tcgacctcgg tcggatcgaa gacgtcgatg tcatcgtcga ccacgaccac
      601 gtgcttgagg tccatgaccg acagcgcggc gaggagcgcg ttcttcgctt cgcccggctg
      661 tttcttgatc gaaatcaccg cgtgccagaa cgcacaaccg ccgagcgtga cgttgatgtc
      721 cttgacctgc acgccggcgg tgcgcagcgc ctggcggatc gcggcatagc gcgtgggcgc
      781 ggcgagccag gtattctccc acggcatgtg cagattgtag tagatcgcgt cttttcgcct
      841 ggcgatcgcc ttgatgcgca cgagcggatt ccagtgcaaa ccgcccatca gccgcgtgaa
      901 ctcgccgaac cttccctccg gccaggtcca gccggtcggc aggatctccg cctcgagcac
      961 gatctcggcg tcggccacat aggggaggtc gatggtctcg cacggcgcga gctcgaccgg
     1021 cgcgccgcgc aacccgccgg cgatcgccat ctcgtcgacc ccgagcggag cccgatagcc
     1081 ggagccggtg atctcgatcg ggtgggtgcc gatgctgatc gagatcggca atggacggcc
     1141 gctctcgtag gcgcgctggg cgaacaatcg catattgttg ggcgtgacga tgtcgatgcc
     1201 cgtgaggctc ttttccttca cgatgaagcg gtagatgcca ctgttgatgc ccagctcggg
     1261 gtcgcgcgtg atcaccacgc cggcggtgat catcggcccg ccgtcgaaga tcgaggacat
     1321 cggaatcggc agcttgtaga ggtcgacctc atcgccgatg acgaccacct cgcgggtcgg
     1381 ggaggtcttg acgtatttcg gcgggatcgg gtggttgatc gcctgggtga gcttgtcctc
     1441 gatttcgcgg tagctctcgc agcccagcgc cgtcatcgat cgctcgcgcg tgcggataag
     1501 gccggagacc accggcatct cgtagccgat cacgttgtgg aaatagagag cggtgtcagc
     1561 ctgatcgacc aacgtggcga cgtggcggat gtccaccggc tgatgcaggt cggcaagctc
     1621 gccgttctgc cgcaggcgat cgaggaattg gcggaaattc tcctgcatcg aacgctccga
     1681 cggggcggtt gttggcggct gcggcctaag ctacttagac cggcgttcga ccacaatcca
     1741 ggcgcccacc ggcaagggac gagaccgtga gcggcaagaa caccatgaaa gcgctcgttc
     1801 tgcgcaagca cggcggcctc gaggagctcg ccgtcgtgaa cgaccacccg ctgcctgtgg
     1861 ccgttcccgg ccacgtgatg atccgcgtgc gagcgtcctc gttcaactat cacgacgtgt
     1921 tcacggttcg cggcatgccg ggaatcaagg tgccgttgcc ggtcgtgctc gggctcgact
     1981 tggccggtga gatcgccgag atcggggcga acgtgaccgg ctggaccgcc ggccagcgcg
     2041 tccttgtcaa tccgctcaac aaggcgaaag gcctgatggg cgaaatgctc gacggcggca
     2101 tggcggagta ttgcctcgtc gccgccgacc agctcatcgc catgccgccg ggcgtgagct
     2161 tcgaggatgc ggcggccctc ccggtcgcct atggcacggc acaccgcatg ctgatcaccc
     2221 acgacactgt caaggcgggc gatcgcgtac tcgttctcgg cgccagcg
//
LOCUS       DATCWM010000633         3854 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_301386, whole genome shotgun sequence.
ACCESSION   DATCWM010000633 DATCWM010000000
VERSION     DATCWM010000633.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3854)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3854)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3854
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_301386"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..838
                     /locus_tag="VIQ50_12455"
     CDS             <1..838
                     /locus_tag="VIQ50_12455"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEY9361240.1"
                     /translation="EAEFGDRVEVKYVWNIMEFGYRAEDILWLVEHGLLTLGYQSSSY
                     LTDRVPALGVVDLPFLFASALSARAAMDGALGDVLARKIEERTNFRILGWFENGFRHI
                     SNRIRPVRTPADLASLRIRVLPSKVQARTFELLGAVPMPMDLTQAIALITAGEIDAQE
                     NPLSNTVTYGVHKFHRFHTLSNHFYISRPIFLHRTAFDSWPADLQHAVRSAIADAVAF
                     QRELHVEEEEQARQAIAAQGCEIVELTAAEHDAFAAAVAPLLKEARQTFGPALLDLTA
                     AA"
     gene            complement(869..1411)
                     /locus_tag="VIQ50_12460"
     CDS             complement(869..1411)
                     /locus_tag="VIQ50_12460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HEY9361241.1"
                     /translation="MIFRHRYVRLGARLSAIAVAALLCGCIGERDLSTTEPSFYRSLA
                     AKDAQVDATMAASMISGYRSNNGLTPVTIDPELMKLAEAQAQAMASRDTLSHDVARSF
                     HDRLKGGGYRAHTAAENVGAGYHTLAQAFSGWRDSPPHRDNMLLKGATRMGIAAAYSP
                     KSKYKVFWALILAEPEERRG"
     gene            complement(1487..2422)
                     /locus_tag="VIQ50_12465"
     CDS             complement(1487..2422)
                     /locus_tag="VIQ50_12465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEY9361242.1"
                     /translation="MNKPVSSVAAIRGEEHWTDKGSDVRLFLWNKHGGDPSGSAGRIL
                     FVHGSSMASQPTFDLQVPGRADSSVMDFFAARGYDTWCVDMEGYGRSTKTRDNNAPIA
                     YGADDCFAAAAYIHKLRGKRPLLVYGISSGALRAALFTQRHPDMVARLALDAMVWTGE
                     GSPTLAERSKRLPEFRAKNRRPIDRKFVRSIFERDHPGTADDVVIEAFADAILALDDS
                     VPTGTYVDMCANLPVCDPEKIPVPTLIMRGEYDGIASFADLLKFFELLPNPDKQFAVM
                     PGIAHASFHQKNYATCYHILESFFAQPAPVYRGGS"
     gene            complement(2468..3451)
                     /locus_tag="VIQ50_12470"
     CDS             complement(2468..3451)
                     /locus_tag="VIQ50_12470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014493786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9361243.1"
                     /translation="MPMSTSQRVSSLIAVAALSLLSAAASVAQDYPSRPIKMIVPFGA
                     GGPTDIFTRLLAEELRKALGEPLVMENRPGAGTIIGTDAAAKSPPDGYTLLMMSATQT
                     TTETLVPNKSYKLLRDFMPVASLLNSELVMVVHPSVPANTVEEFIALAKAKPGALNYA
                     SSGVGSNYHMAGELFKTLTGTDMLHVPYKGSTGARNDIISGQIEMMFDSVPSMAPMIQ
                     AGRVKALGTTGKVRSAILPGVPTLSEAGVPGYEATIWIGLMAPTGTPQPIVARLNAEI
                     NKILTRADVRQAWEKQGATAMAMSPDEFGAYIQAEIDKWAKVIKANGIKPE"
     gene            complement(3566..>3854)
                     /locus_tag="VIQ50_12475"
     CDS             complement(3566..>3854)
                     /locus_tag="VIQ50_12475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361244.1"
                     /translation="AENTGSARLLRYANTEVVVSVQAPIGGILLLNDVWQPWWRASID
                     GIDTEMLKANVIFRAVVCPRGQHVIRFSFHPFAGAFAEMMQKLTHARVSEP"
BASE COUNT          681 a         1216 c         1257 g          700 t
ORIGIN      
        1 tgaggccgaa ttcggcgacc gcgttgaagt caaatatgtc tggaacatca tggagttcgg
       61 ctaccgcgcc gaggacatcc tgtggttggt cgagcacggc ctgctgacgc tgggctatca
      121 atcctcgagc tacctgaccg atcgggtgcc ggcgctcggc gtcgtcgacc ttccattcct
      181 gttcgccagc gcgctgtccg cgcgggcggc gatggacggc gcgctcggcg acgtgctcgc
      241 ccgcaagatc gaggagcgca cgaacttccg catcctcggc tggttcgaga acggctttcg
      301 gcacatctcg aaccgcatac ggccagtgcg cacgcctgcg gatctcgcca gtctgcgaat
      361 ccgtgtcctg ccgagcaagg tgcaagcgcg gacgtttgaa ttgctcggcg cggtgcccat
      421 gccgatggat ctcacgcagg ccatcgcgct gatcaccgcc ggagaaatcg acgcgcagga
      481 gaatccgctc tcgaataccg tgacctacgg cgtgcacaag tttcaccgct tccacacact
      541 gagcaatcac ttctacattt cgcggccgat cttcctgcat cgcaccgcct tcgattcctg
      601 gccggcggat cttcagcacg ccgtacgcag cgcgatagcg gatgcggttg cgtttcaacg
      661 cgagctgcac gtggaggagg aagagcaagc acgccaagca atcgcagcgc agggctgcga
      721 gatcgtcgag ctcacggccg ccgagcacga tgcattcgcc gccgcggtgg cgccgctgct
      781 caaggaagcg cggcaaacct tcgggccggc gctgctcgat ctgaccgccg cggcgtgagc
      841 gccgcccgcg aggacgcgaa aagcgggttt agccgcgccg ctcctcgggc tccgccaaga
      901 tgagcgccca gaacaccttg tatttggatt tcggcgaata ggccgcggcg atgcccatgc
      961 gggtcgcgcc cttgagcagc atattgtcgc ggtgcggcgg cgaatcgcgc cagccggaga
     1021 aagcttgcgc cagagtgtgg tagccggcgc cgacattctc cgccgcagtg tgcgcgcggt
     1081 agccgccccc tttgaggcgg tcgtggaagc tgcgcgccac gtcgtggctg agcgtatcgc
     1141 ggctcgccat ggcctgcgcc tgcgcctcgg caagcttcat cagctcggga tcgatggtga
     1201 ccggggtcag tccgttgttg ctgcggtagc cggagatcat cgaggccgcc atagtcgcgt
     1261 cgacctgcgc gtccttggcg gcgaggctgc gatagaagct cggctcggtc gtggacaggt
     1321 cacgctcgcc gatgcagccg cagagcagcg ccgccaccgc aatagcggac aagcgcgcgc
     1381 caaggcgcac gtagcggtgt cgaaaaatca tgcctatccc cccgctccct cggcatcgat
     1441 cctgcgctta caggatggca gaaccgtgga aaccatatgg cggcggtcag ctcccgccgc
     1501 gatagaccgg cgccggctgg gcgaagaagc tttccaggat gtgatagcag gtggcgtagt
     1561 tcttctggtg gaaggaggcg tgcgcgatgc ccggcatcac ggcgaactgc ttgtccgggt
     1621 tgggcaacaa ttcgaagaac ttcagaaggt cggcaaagct cgcgatgccg tcgtattcgc
     1681 cgcgcatgat gagggtgggg acggggattt tctcaggatc gcagaccggc agattggcgc
     1741 acatatcgac gtaggtgccg gtcggcaccg aatcgtcgag cgcgagtatg gcgtcggcga
     1801 atgcctcgat gacgacatca tcggcggtgc cgggatgatc gcgctcgaag atcgagcgca
     1861 cgaatttgcg gtcaatcggg cgccggttct ttgcgcggaa ctcgggcaat cgtttgctgc
     1921 gctcggcaag ggtcggcgaa ccttcgccgg tccataccat ggcgtcgagc gcgagtcgcg
     1981 cgaccatgtc cgggtgacgc tgggtgaaca aggccgcgcg caaggcgccg gacgaaattc
     2041 cgtacacgag aagcgggcgt ttaccgcgca gcttgtggat gtaggccgcg gccgcgaagc
     2101 agtcgtcggc gccataggcg atcggcgcat tgttgtcgcg ggtcttggtg gagcggccgt
     2161 agccctccat gtcgacgcac caggtgtcgt agccgcgcgc ggcgaagaaa tccatcactg
     2221 aggagtctgc gcgtcccggc acctgcaggt cgaaggtcgg ctgcgaggcc atggacgagc
     2281 cgtgcacgaa caagatgcgt cccgcggaac cggaaggatc cccgccgtgc ttattccaca
     2341 gaaacaagcg cacatcgctg cctttgtcgg tccagtgctc ctcgccgcgg atggcggcga
     2401 cagatgaaac cggcttgttc atgctagggc tcctcccctc gttgcgacga acgccatcca
     2461 accgcgctca ttccggcttt atgccgttgg ctttgatgac tttggcccat ttgtcgatct
     2521 ctgcctggat ataagcgccg aactcatcgg gggacatcgc cattgcagtt gcgccctgct
     2581 tctcccatgc ctgccgtacg tccgcccgcg taaggatttt gttgatctcc gcgttgagcc
     2641 gcgcgacgat cggctgcggc gtgcccgtcg gcgccatcaa gccgatccaa atcgtcgctt
     2701 cgtagcccgg aaccccggct tccgacaatg tcggcacgcc ggggaggatg gccgagcgca
     2761 ccttgccggt cgtgccgagc gctttgaccc gcccggcctg gatcatcggg gccatgctcg
     2821 gcaccgagtc gaacatcatt tcaatctgcc cgctgatgat gtcgttgcgt gcgccggtgc
     2881 tgcccttgta cggcacgtgc agcatgtccg tgccggtgag ggtcttaaaa agctcgccgg
     2941 ccatgtgata attcgagccg actccggagg aggcatagtt gagcgcgccg ggcttcgcct
     3001 tggcgagcgc gatgaattcc tcgaccgtgt tcgccggcac cgaggggtgc acgaccatga
     3061 ccaattcgga attgagcagc gacgccaccg gcatgaagtc gcgcaacaac ttgtacgact
     3121 tgttggggac cagcgtctcg gtcgtcgtct gcgtcgcgga catcattagc agcgtgtagc
     3181 cgtccggcgg cgactttgca gcggcatcgg tgccaatgat ggttccggca cccggccggt
     3241 tctccatcac taacggttcg ccgagcgctt tgcgcagctc ctcggccagc aagcgcgtga
     3301 aaatgtcggt cggaccgccg gcgccgaacg gcacgatcat cttgatcggg cgcgacggat
     3361 aatcctgcgc caccgacgcc gccgccgaga ggagcgataa cgccgcgacc gcgatgagag
     3421 acgaaacgcg ctgcgaggtg ctcataggca tcgtttcatt cggaacacgc gcgggaattg
     3481 catgcccccg cccgcgcggg ccgcgacttt atgcgatctg cgcggcacgg gtccagaaag
     3541 gaatgggatc ggtcgcaagt cccccttacg gctcgctcac ccgcgcgtgt gtcaatttct
     3601 gcatcatttc cgcgaaagca ccggcgaaag gatggaagct gaaacggatc acgtgctggc
     3661 cgcgcggaca gaccacggca cgaaagatca cattggcttt gagcatttca gtatcgatcc
     3721 cgtcgatgct cgcgcgccac cacggctgcc agacgtcgtt gagcaggaga atgccgccga
     3781 tcggcgcttg gacgctcacc acgacttcgg tgttggcgta gcgcagcagc cgcgcgctgc
     3841 cggtattctc ggcg
//
LOCUS       DATCWM010000634         2056 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_301407, whole genome shotgun sequence.
ACCESSION   DATCWM010000634 DATCWM010000000
VERSION     DATCWM010000634.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2056
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_301407"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1172
                     /locus_tag="VIQ50_12480"
     CDS             <1..1172
                     /locus_tag="VIQ50_12480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020087037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY9361245.1"
                     /translation="LVLVVQPPPVSGIGNAGGFRMMVEDRQSRGSQALLEAAGTMMSK
                     AAQTPGLNQVFTLFENSTPQLYLDIDRTKAQLLGVNVPEVFAALQVYIGSAYVNDFNV
                     FGKTFRVTAQADARYRMDPKDILNIRVRNSSGNTVPLGSFTTVNNIAGPYRVARYNLY
                     PAAELDGAPARGYSQGQAIDIMQKLAAETLPDGFGYEWTTLAFQQVRAGNTAMFAFAL
                     AVVFVFLVLAAQFESVTLPLAVIMIVPMCLVAAITGVIMRGQDNNILTQVGFVVLIGL
                     AAKNAILIVEFAKQLEDQGRSRSAAAVEAASLRLRPILMTSLAFIFGVMPLVWAIGAG
                     AELRQMLGTAVFAGMIGVTAFGLIFTPIFYVVCRWLAEKTSRRRAAPAAPPAPAE"
     gene            1415..1852
                     /locus_tag="VIQ50_12485"
     CDS             1415..1852
                     /locus_tag="VIQ50_12485"
                     /inference="COORDINATES: protein motif:HMM:NF013487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEY9361246.1"
                     /translation="MIRTALAVAVLAFGATALVAQSDPIAARKALMKANGDQNRVATE
                     MLEGKRPFNLDEAKKVLATFAETGEKAPALFPDDSKTGGDTAALPAVWENKSDFQAKL
                     AKFAHDSKAALDATKDLDSFKVQITEVRKNCGGCHQTYRKRTS"
BASE COUNT          366 a          664 c          654 g          372 t
ORIGIN      
        1 ggctggtcct ggtggtgcag ccgccgccgg tctccggcat cggtaatgcc gggggcttcc
       61 gcatgatggt cgaggaccgt caaagccgcg gctcgcaggc attgctggaa gccgcgggca
      121 cgatgatgag caaggcggcc cagactccgg gtctgaatca ggtgttcacc ttgttcgaga
      181 attcgacgcc gcagctctat ctcgacatcg accgcaccaa ggcccagctc ctcggcgtca
      241 atgtgccgga ggttttcgcc gcgctgcagg tgtatatcgg ctcggcctac gtcaacgact
      301 tcaatgtgtt cggcaagacc ttccgcgtca ccgcccaggc cgatgcgcgt taccgcatgg
      361 atccaaagga catcttgaac atccgcgtgc gcaactcgtc aggcaatacg gtgccgctcg
      421 gctcgttcac gacggtgaac aatattgccg gaccgtaccg ggtcgcgcgc tacaaccttt
      481 accccgcggc cgagctcgac ggcgcgcccg cccgaggcta ttcgcagggc caggcgatcg
      541 acatcatgca aaagctcgcc gccgaaacgt tgcctgacgg cttcggctac gagtggacga
      601 cgctcgcgtt ccagcaagtg agggccggaa acaccgcgat gttcgcgttt gcccttgctg
      661 tcgtattcgt gttcctggtg ctggctgcgc agttcgaaag cgtgacgctt ccactcgccg
      721 tgatcatgat cgtgccgatg tgcctcgttg ccgccatcac cggcgtgatc atgcgcgggc
      781 aggacaacaa catcctcacc caagtgggat ttgtcgtgct gatcggactt gccgccaaaa
      841 acgcgatcct gatcgtggag tttgccaaac agctcgagga ccaggggcgc agtcgttccg
      901 ccgctgcggt cgaagcggcg agcctgcggc tgcgtcccat cctgatgacg tcgctcgctt
      961 tcatcttcgg cgtcatgccg ctcgtttggg cgattggggc gggagcggag ctgcggcaaa
     1021 tgctggggac cgccgtgttt gccggcatga tcggcgtgac ggcgttcggg ctcatcttta
     1081 ctccgatctt ctacgtggtc tgccgctggc tcgcggaaaa aaccagccgt cgtcgtgccg
     1141 cgccggcggc gccgcccgcg ccagcggaat aggcgccgca tcccgagagg acatgccggc
     1201 gacggcagcg cgcgtttggg cgtccgtcgc gcaggaggcg gcttcacacc ctgtgagttc
     1261 acgaaatcgt gatcgccgcg cagaatttcg gattttcgcc tcgcccggaa taacaaaatg
     1321 tgaggggtgt ttacgcgatg cccacccaag ccgcgtccac tgcgcggaga atcagtccat
     1381 aggggacgtt cagtccatag agggagcaag caaaatgatc cgcaccgcgt tagctgttgc
     1441 cgtgctcgcg ttcggcgcca ccgcgctggt cgcgcaaagc gatccgatcg cggcccgcaa
     1501 ggccctcatg aaagcgaacg gcgaccaaaa ccgggtcgcc accgagatgc tggagggcaa
     1561 gcggcccttc aatctcgacg aggcaaagaa ggtcctggcg accttcgccg agacgggcga
     1621 gaaggcgccg gccctgttcc cggacgactc caagaccggc ggcgataccg ccgcgctgcc
     1681 ggcggtctgg gaaaacaagt ccgatttcca ggcgaagctc gccaagttcg cccacgactc
     1741 caaggcggcc ctggacgcga ccaaggatct cgacagcttc aaggttcaaa tcaccgaggt
     1801 gcgcaaaaac tgcggcgggt gccaccagac ctatcgcaag cggacgtcgt aatcgtttcg
     1861 cgcctgcgcg ggcagggcgg ccgtcggcgc gatggccgcc ctttcgtttt gctggcgcct
     1921 gatccgaaag gacgccgatg ctgcgcaagc tcgtgatctt cgcggtgatc ctcgcgatcg
     1981 tcggcgctgc cgcgttctgg ttcatcacca tgccggcaac ggtgcccgcg agcgcgctgg
     2041 cgccctatgc gcccaa
//
LOCUS       DATCWM010000635         3635 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_512196, whole genome shotgun sequence.
ACCESSION   DATCWM010000635 DATCWM010000000
VERSION     DATCWM010000635.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3635)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3635)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3635
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_512196"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..359)
                     /locus_tag="VIQ50_12490"
     CDS             complement(<1..359)
                     /locus_tag="VIQ50_12490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361247.1"
                     /translation="MRRLLWILLAVLTVALLVLVLQQNETALAELSRFDGASVETKIM
                     AAALVGLIALMLFRQRFSHALESALIWVMLATLLALGYTYRFELREVADRVLAELIPG
                     RPVTRGRTVEIARTSSGG"
     gene            712..1323
                     /locus_tag="VIQ50_12495"
     CDS             712..1323
                     /locus_tag="VIQ50_12495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008875843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HEY9361248.1"
                     /translation="MKLYDGGRAPNPRRTRIFLAEKGVTLPMEQVDLGAMAQMSAAYA
                     AINPLKRVPALVLDDGTVITESIAICRYFEALKPDPPLFGRGALELARVEMWNRRLEL
                     HLLFPVSHVFRNSHPAMKEMEVPQVPAWAEANKPRIQEFVALLDGELKDRPFVAGDAF
                     TVADITGLVAVDFMKPAKLAVPDELKHLKRWHGDVAARPSASA"
     gene            1341..2069
                     /locus_tag="VIQ50_12500"
     CDS             1341..2069
                     /locus_tag="VIQ50_12500"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY9361249.1"
                     /translation="MGCGDAFGSGGRFNTCFFLETAKGTLLVDFGASSLVALKAHGLD
                     PDRIDAIVLSHLHGDHFGALPFLLLDAQFLARRERPLLIAGPPGTRARLDQLLEVFFP
                     KSTTNKWRFSWEVMEIEVGRPTDVLGHSVTTTEVLHYSGALSTAIVLSDGVKRFAYSG
                     DTEWVDALLSVADGADLFIIECFAYSGELPGHITWDVLKPLLPDLRARRIMLTHMNPV
                     MLANLDEVRAAGVLPAEDGAVIEI"
     gene            complement(2100..2969)
                     /locus_tag="VIQ50_12505"
     CDS             complement(2100..2969)
                     /locus_tag="VIQ50_12505"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008130800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9361250.1"
                     /translation="MAKVAFLGLGVMGYPMAGHLKNKGGHDVTVYNRTAAKAQKWVEH
                     YGGRSAATPKAAAEGQDFVMCCVGNDNDLREVTLGTNGAFHGVKKGAVFVDHTTASAE
                     IARELYGQAKERGFGFVDAPVSGGQAGAENGVLTVMCGGDAEPYARAEKVIQSYARMC
                     KLLGPAGAGQLTKMVNQICIAGLVQGLSEGIHFAKKAGLDVDAVIETISKGAAQSWQM
                     ENRYKTMAAGKFDFGFAVDWMRKDLAICLGEARKNGASLPVSALVDQFYAEVQKMGGR
                     RWDTSSLIARLER"
     gene            3134..>3635
                     /locus_tag="VIQ50_12510"
     CDS             3134..>3635
                     /locus_tag="VIQ50_12510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018459389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-loop NTPase"
                     /protein_id="HEY9361251.1"
                     /translation="MALNKEQVLAALEGVASPTGTPLPRTGALSDVVAGDGKVFFSIT
                     VDAADVKAWESVRKRAEEAVRALPGVQSALVALTAERKGGAAPPRPQGRATPARGAPR
                     GDALQGVPGVAAIIAVASGKGGVGKSTTAVNLALGLSALGLKVGVLDADIYGPSLPKL
                     LAIRERP"
BASE COUNT          618 a         1167 c         1182 g          668 t
ORIGIN      
        1 ccgccgctgc ttgtgcgcgc gatttcgacc gtgcgtcccc tggttacggg acggccggga
       61 atgagctcgg cgagcacccg gtcggccacc tcgcgcagct cgaaacggta ggtatatcca
      121 agcgccaaca gcgtcgcgag catcacccaa atgagggcgg attcgagtgc gtgggaaaaa
      181 cgctggcgaa acagcatcag cgcgattagc ccgacgagcg ccgccgccat gattttcgtt
      241 tcgaccgacg cgccgtcgaa tcgggaaagt tcggccagcg ccgtttcatt ctgctgcagc
      301 acgagcacga gaagtgcgac ggtgagaacg gcgagtagga tccagagcag gcggcgcacg
      361 gcgatgtcct tcagcccacg ctaaatcata ttccgttcat gtcgagctag atgcggcgtg
      421 gtcgctggcc gtcgccgccg ccgcaagcgc tttcgccaat gcattggcag gcgaggcatc
      481 ggcctccacc gtcgagcgct tgacgtccgc acgaggggca tgatggggtg tagacgaagg
      541 aataatacaa ccggttgggt gtatgatcca atgtagccgg cgcgacggca atggcagcaa
      601 gcctccgcgc gcattcccgt ggagcgggaa tccagggccc acgtccggat gcccgcttgc
      661 gggaggacga gcggaagaga acgtgggccg acgcgcagca cgggtaccga aatgaagctt
      721 tacgacggag gccgcgcccc caatccgcgg cgcacgcgga tctttctggc cgagaagggt
      781 gtcacgctgc ccatggagca ggtcgatctg ggcgccatgg cgcagatgtc ggcggcgtat
      841 gccgcgatca acccgctcaa gcgcgtgccg gcgctcgttc tcgacgacgg cacggtgatc
      901 acggaatcga tcgcgatctg ccgttatttc gaggcgctta agcccgatcc gccgctgttc
      961 gggcgcggtg cgctggagct tgcccgtgtc gagatgtgga atcggcgtct cgagctgcat
     1021 ttgttgtttc cagtctcgca cgtctttcgc aactcgcatc cggcgatgaa ggaaatggag
     1081 gtgccgcagg tgccggcatg ggccgaggcc aacaagccgc gcatccagga attcgtcgcg
     1141 ttgttggacg gcgagctgaa agaccgcccg tttgtggcgg gcgacgcatt caccgtcgcc
     1201 gacatcaccg gtctcgtcgc cgtcgatttc atgaagccgg caaagctcgc ggtgccggac
     1261 gagctcaaac atctcaagcg ctggcatggc gacgtcgccg cccggccgag tgcctcggcc
     1321 tgaccatgcg cctgacgatc gtgggatgtg gcgatgcctt tggctctggc ggtcggttca
     1381 acacctgctt ctttctcgaa acggccaagg gaacgctgct agtcgacttc ggggcctcat
     1441 cgctggtcgc gctgaaggcg cacggcctgg atcccgaccg tatcgacgcc atcgtgcttt
     1501 cgcatctgca tggcgaccat ttcggcgcgt tgcccttcct gctactggat gcccagtttc
     1561 ttgcgcggcg cgagcggccg ctattgatcg ccggaccgcc cggcacgcgc gcacgcctcg
     1621 atcagcttct cgaagtgttc ttcccgaagt cgaccacgaa caaatggcgg ttttcatggg
     1681 aagtgatgga gatcgaggtc ggccgtccga ccgacgtgct cggtcattcc gtcaccacca
     1741 ccgaagtgct gcattattcg ggcgcactct cgaccgcgat cgtgctcagc gacggggtga
     1801 agcgcttcgc ctattccggc gataccgagt gggtggatgc gctcctctcc gtagccgacg
     1861 gcgcggatct cttcatcatc gagtgcttcg cgtattccgg cgaattgccc ggccacatca
     1921 cgtgggacgt gctcaagccc ctgctgcccg atctgcgcgc gcggcggatc atgctcacgc
     1981 atatgaaccc cgtcatgctc gcaaatctcg atgaggtcag ggccgccggc gtgctccccg
     2041 ccgaggacgg cgcggtgatc gagatttgag atggatggtc ctggcgggcg cgaagccgct
     2101 taccgttcca accgcgcgat gaggctcgag gtatcccagc gtcggccgcc catcttctgc
     2161 acctcggcat agaactgatc gaccagcgcg ctcaccggca agcttgcgcc gttcttgcgc
     2221 gcctcgccga ggcaaatggc gagatccttg cgcatccaat cgaccgcgaa gccgaaatcg
     2281 aacttgcccg cggccatggt cttgtagcgg ttctccattt gccaggactg ggccgcgccc
     2341 ttggagatgg tctcgatgac ggcgtcgacg tcgaggcccg cctttttcgc gaaatgaatg
     2401 ccttcggaca gcccctgcac caagccggca atgcagatct ggttgaccat cttggtgagt
     2461 tggcccgccc ccgcggggcc aagaagcttg cacatacgcg cgtaggattg gatcaccttc
     2521 tcggcgcgcg cataaggctc ggcatcgcct ccgcacatga ccgtgagcac gccgttctcc
     2581 gccccggcct gtccgcccga gacgggggca tcgacgaagc cgaagccgcg ctctttcgcc
     2641 tgcccataga gttcgcgggc gatctctgcc gaggcggtgg tgtggtcgac gaacacggcg
     2701 ccttttttca cgccgtggaa ggcgccgttc gtaccgagcg tcacctcgcg cagatcgttg
     2761 tcgttgccga cgcagcacat gacgaagtcc tggccctcgg cagcggcctt gggcgttgct
     2821 gcgctgcgcc cgccgtaatg ctcgacccac ttctgcgcct tggccgcggt gcggttgtac
     2881 acagtgacat catggccgcc tttgttcttg agatgcccgg ccatgggata gcccatgacg
     2941 ccgagaccga gaaaagccac cttcgccatt ctgtcctcct cgagcactgc catgcgacgg
     3001 cgcggatacc tatatgcgcg attgattgcg acggcgcggc gctggcgtca accgtcatcg
     3061 cgttgaccag acccgccccc cgcctatggt gtcgcacgga aacggacgca tcaggtccgg
     3121 cggagaaggt gtgatggcgt tgaacaagga acaggtgctc gcggctctcg aaggcgtcgc
     3181 gagtccaacc ggaactccgc tgccaagaac cggcgcgctt tccgacgtgg tcgcgggcga
     3241 cggcaaagta ttcttttcca tcaccgtgga tgccgccgac gtcaaagcct gggagtccgt
     3301 gcgcaagcgt gcggaagagg ccgtgcgggc gctgccgggc gtgcaatccg ccctggttgc
     3361 cttgacggcg gagcgcaagg gaggcgcggc acctcctcgc ccgcagggga gagccacgcc
     3421 cgcgcgcggt gcgccgcgtg gggacgcgtt gcagggggtg cccggcgtcg cagcgatcat
     3481 cgcggttgcc tcgggcaagg gcggggttgg gaaatcgacc acggcggtca atctcgcact
     3541 cggtttaagc gcgctcggtc tcaaggtcgg tgttctcgac gccgatatct acggtccgtc
     3601 gctgccgaag ctgctcgcca ttcgcgaacg gccgc
//
LOCUS       DATCWM010000636         2925 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_101991, whole genome shotgun sequence.
ACCESSION   DATCWM010000636 DATCWM010000000
VERSION     DATCWM010000636.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2925)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2925)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2925
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101991"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..350)
                     /locus_tag="VIQ50_12515"
     CDS             complement(<1..350)
                     /locus_tag="VIQ50_12515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEY9361252.1"
                     /translation="MRALERPANLTGTNAPAFGSDVVADTLRALEIPYIALNPGASYR
                     GLHDSIVNFLGNETPQMLLCLHEESAVAIAHGYAKVTGKAMAAAVHSNVGLMHGTMAI
                     FNAWCDRMPIMILGA"
     gene            complement(462..1697)
                     /locus_tag="VIQ50_12520"
     CDS             complement(462..1697)
                     /locus_tag="VIQ50_12520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HEY9361253.1"
                     /translation="MNKRMSPPLSRRACLSGLAAAMAVWSATARAQASKTPFEQWVAA
                     FRARARARGISDATYTRVMSTIKPDTAVFELNRYQPEFNEQLWQYLNRRVSDWRITTG
                     KEKAKEYTPLFDRIEKDYGVDRGIILGLWGIESAFGDPDVQKNHMRPIIPALAALAWG
                     EPRRRAYWEQELLNALVIIERGWSTPEEMRGSWAGAMGHTQWMPEVWLNVGLDYDGDG
                     RASPFGKPDDALAGTAQYLVKRGKYRPGEHWGYEVRGAGGMSGKAASRTYESWQKAGV
                     TRADGTAFPQPNASAKLWVPVPGGPAFLLGPNFYAVRSYNPSMNYTLSIVHLGDRIMG
                     GGPLVQSFPGGERTPTLAEVQEIQKRLTDLGFDTGGTDGRVGNDTMIAVRNFQRKAGM
                     QPADGYAGVKLLARLRQGL"
BASE COUNT          486 a          907 c          989 g          543 t
ORIGIN      
        1 gcgccgagga tcatgatcgg catgcggtcg caccaggcgt tgaagatcgc catggtgccg
       61 tgcatcagcc cgacgttgga gtgcaccgcc gcggccatgg ccttgccggt gaccttcgca
      121 tagccgtggg cgatcgcgac cgcgctttcc tcgtgcaggc acaacagcat ctgcggtgtc
      181 tcgttgccga ggaagttcac gatcgaatcg tgcaagccgc ggtagctcgc gccgggattg
      241 agcgcgatgt agggaatttc gagcgcgcgc agcgtgtcgg caaccacgtc gctgccgaaa
      301 gcaggcgcgt tcgtgccggt gagattggcc gggcgctcga gcgcgcgcag cgagggatgg
      361 gcggcactcg caggctttcc ggcggcgggc gccaccttgg cttttgcggt cgtcacgggg
      421 atgatccttg ggttctccga aaggagcccc atagaaccgg atcagaggcc ttggcgcaac
      481 cgcgccagaa gcttcacgcc ggcatagccg tccgcgggct gcatgccggc cttgcgctgg
      541 aaattgcgca ccgcaatcat ggtgtcgttg cccacgcgcc catcggtgcc gccggtgtcg
      601 aagccgaggt cggtcaggcg cttctggatt tcctgcacct cggcgagcgt gggcgtgcgc
      661 tccccgccgg ggaaggactg taccagcggc ccgccgccca tgatgcggtc gccgagatgc
      721 acgatcgaca gcgtatagtt catcgagggg ttgtaggagc gcacggcata gaaattcgga
      781 ccgagcagga acgccggtcc gcccggcacc ggcacccaaa gctttgccga tgcattgggc
      841 tgcggaaacg cggtgccgtc ggcgcgcgtc acgccggcct tctgccagct ttcgtaggtt
      901 cgtgacgccg ctttgccgct catcccgcca gccccgcgca cttcgtagcc ccagtgctcg
      961 ccagggcgat acttgccgcg cttgacgaga tattgcgccg tgccggcgag cgcgtcgtcg
     1021 ggcttgccga agggcgaggc ccgcccgtcg ccgtcatagt cgaggccgac attgagccac
     1081 acctcgggca tccactgggt atggcccatg gcgcccgccc aggagccgcg catctcctcg
     1141 ggcgtgctcc agccgcgctc gatgatgacg agtgcgttga gcagttcctg ctcccaatag
     1201 gcgcgacggc gcggctcgcc ccacgcgagc gccgcgagcg cggggatgat cgggcgcatg
     1261 tgattcttct ggacgtccgg atcgccgaat gccgattcga ttccccacag gccgagtatg
     1321 atcccgcggt cgacgccgta gtccttctcg atgcggtcga aaagcggcgt gtattccttc
     1381 gccttctcct tgccggtcgt gatgcgccag tcggagacgc ggcgattgag atattgccag
     1441 agttgttcgt tgaattcggg ctggtaacgg ttgagttcaa aaactgccgt atcgggtttg
     1501 atagtactca taacccgcgt gtaggtggcg tcggatatac cacgtgcgcg tgcccgcgcg
     1561 cggaatgctg cgacccattg ctcgaacggc gttttgcttg cctgcgcgcg cgcggttgcg
     1621 ctccacaccg ccatggctgc cgccaggccg gacaggcagg ctcgccttga cagaggaggg
     1681 ctcatccgtt tgttcattac cgcgtatcct gaagtccgtt actggtgcgg cgggcgattt
     1741 tatagctgtt tctgtcggct ttgcgaccgg gatcggcacc gccgccgggg ccgctgtggg
     1801 aagcggcgtc tccgggatcg ataccgtcgg gatattttcg cggacatccg gctccttgat
     1861 ctcctggccg cggccgcgga ttacccgctc gtatgcagta acgagcgtca tataaggatt
     1921 gacgaacacc cagccgtatt tggtcggcac ctgcatgtcg aaatggagat gataggtggt
     1981 ggcgcgctca cgccggaaga aattgccgac cttgccgatc acctcgccct cgtgcacgag
     2041 gcggccgctc accatgccgg cggcgttgaa ttgcctggga aacatgtgca ggtagcggaa
     2101 gcggatgtgc tcgttgggcg cattgaccac gatgtagagc gcctcttggg tgggcgcgcg
     2161 gagcaccgcc ccgtcgcgca cggcgaccac gtcgtgcaga tagggctcgc agcggtttgc
     2221 cccttgcatg cgctgcttgc agaaggccgg tcggatgtcc tggccttggt ggccgagacc
     2281 ggccgggcat tggccgacat aaaagtagcg gtgctcgcag aaattgtcgc gccagggata
     2341 ggaatagttg tcgggggccg attcgtccaa aacgaggcgc tgtccgttga cacggcagcg
     2401 ataggccctc accccatcca agacgccggc gccagagcgc ccagtcgcgt cgcagtctcc
     2461 ccaattcatg aaggattggg aattggcgaa ggccggcgcg tcggcgagcg ggaagcggat
     2521 cttggaatag acggtgtaat cggcgacgcc gcctttacgt ctaaatccgg agccgggaag
     2581 tatgtccccg gggctgcggt aggtgaagac gctcgactgc tcggcgggcc gttcgatcgt
     2641 atcggccgtg atcgcctcgg gctgcgctcc cggcgtgccg ccggcgacgc ggagcgactt
     2701 gaggaagcga acggcgactt tgtcggcgtc acggcacgat attctgcgga accgcaccgc
     2761 gccgtcggag cattcgatag ccacaacgta aggcacgccg tagcgcacga aggtgtagcg
     2821 cacgtaattt tccagataga ggcgccggat gccggggatc tcatcgaggc catggaccgg
     2881 ccatccgatc atccccaccg gctcgtcgag ctgatagagg agcgc
//
LOCUS       DATCWM010000637         2588 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_431459, whole genome shotgun sequence.
ACCESSION   DATCWM010000637 DATCWM010000000
VERSION     DATCWM010000637.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2588
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_431459"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1195
                     /locus_tag="VIQ50_12525"
     CDS             <1..1195
                     /locus_tag="VIQ50_12525"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HEY9361254.1"
                     /translation="ALLEGMQHLLGWEPIVEAGNIIGLFDVTGGGAISLEPGGQFELS
                     GAPVETVHQTCSELMAHLAQVKEVARPLGIGFLGLGMTPTWSRAQIPMMPKGRYRIMT
                     GYMPKVGKLGLDMMYRTCTVQTNIDYSSEADMVKKLRVSLALQPVATAMFANSPFTEG
                     KPNGFLSFRSEIWRDTDPDRSGMLPWAFEPGMGFERYVDYALGVPMYFVKRGERYIDV
                     AGQSFRDLMAGGLEGLPGEHATISDWVNHVSTIFPEVRLKRYLEMRGADGGPWRRLPA
                     LPAYWVGILYDDDSLQAAWDLVKDWTAAERQKLRDEVPRLGFAATIAGQSVLQLAKTT
                     IALAGHGLARRRRLDARGQDERRFLRPIEEYVGRGITPAEELLAKFHGPWDGSVEPVF
                     KEYAY"
     gene            complement(1272..>2588)
                     /locus_tag="VIQ50_12530"
     CDS             complement(1272..>2588)
                     /locus_tag="VIQ50_12530"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEY9361255.1"
                     /translation="LAPEGPHTQLGHGLRAVALIAGAIALIVLAGRYLLNPLFRLLAQ
                     TGSREVMTAAALLVVLGAAFTMQKAGASMALGAFLAGLLLAESNYRHELEADIEPFRG
                     LLLALFFMGIGMSIDLAVVRDNLWLIVAAAVLITALKAAIVWLLFRATCGHRWDALRA
                     GSVLTGAGEFAFVLIPLAASLDVLDTRQASILTAIAAITMLLGPFVASFTNEFMRRFS
                     GPDLREPDDFSDARGSVLVIGFGRFGQIVSQCLLAEGIDVTAIDNDPEMLESVARFGF
                     KVYYGDGTRLDVLRAAGMREARLIAVCIDDPEAASRIVDLVHAECPAAKLYVRSFDRR
                     HTLQLIAKGVDFELRETYESAIVFGRNTLEGLGFDPERAAAVEAFVRRRDLERLALQQ
                     AEGLSAGLDLLNTRMVHEPLSAPRREVKPLNPEAEEIISHHPPAAE"
BASE COUNT          504 a          785 c          849 g          450 t
ORIGIN      
        1 tgcgctgctc gagggcatgc aacatctgct gggttgggaa ccaatcgtcg aggcgggaaa
       61 catcattggt cttttcgacg tgaccggtgg cggtgcgatc tcgctcgagc cgggcgggca
      121 gttcgagctt tcgggcgcac cggtcgagac cgtgcatcag acctgttccg agctcatggc
      181 gcatctcgcg caagtgaaag aagtcgcgcg gccgctcggc atcggctttc tcggcctcgg
      241 catgacgccg acctggagtc gagcgcagat tccaatgatg cccaaggggc gttaccgcat
      301 catgacgggt tacatgccga aggtcggtaa acttggcctc gacatgatgt atcgcacttg
      361 caccgtgcag acgaacatcg attattcctc cgaagccgac atggtgaaga agctgcgggt
      421 ctcgctcgcg ctgcagccgg ttgcaacggc gatgttcgcc aattcgccct tcaccgaggg
      481 caagcccaac gggtttctct cgttccggtc cgagatctgg cgcgataccg accccgaccg
      541 ctccgggatg ctaccctggg cattcgagcc cggcatggga ttcgagcgtt acgtcgacta
      601 tgccctgggc gtgccgatgt acttcgtcaa acgcggcgag cgttatatcg acgtcgccgg
      661 ccaatcattc cgcgatctga tggcgggagg acttgagggc cttccaggcg agcacgccac
      721 aatttccgac tgggtcaacc acgtctccac gatctttccg gaggtgcggc tcaagcgcta
      781 tctggaaatg cgcggcgcag acggcggtcc atggcgccgc ttgccggcgc ttccggccta
      841 ctgggtcggg attctctacg atgatgattc actgcaagcc gcttgggatc tggttaagga
      901 ctggacggcc gcggagcgtc agaaacttcg cgatgaggtg ccgaggctgg ggttcgccgc
      961 cacgatcgcc ggtcagagcg tgctgcagct ggcgaagacc acgatcgcgt tggcgggcca
     1021 cggccttgcg cggcgtcggc ggctggacgc ccgcggccag gacgagaggc gctttctacg
     1081 gccgatcgag gagtatgttg ggcgcggcat cacgccggcg gaagagctgt tggcgaaatt
     1141 ccatgggccc tgggacggca gcgtggagcc cgttttcaag gaatacgcgt attgatgcat
     1201 ccaacattcc tgtttgcctc ttcgcggcct atacgcgaac aatgcaacag gaatgcatgg
     1261 cagggacagc atcactctgc agccggtgga tgatgggaaa tgatttcttc cgcttcggga
     1321 ttgaggggtt ttacctctcg cctcggcgcg ctcagcggct cgtgcaccat gcgcgtgttc
     1381 aatagatcga ggcccgccga gagtccctcg gcctgctgca acgcgaggcg ctcgagatcg
     1441 cggcgccgca cgaatgcctc gacggcggcg gcgcgctcgg gatcaaaccc cagaccttcc
     1501 agcgtgttgc gcccgaacac gatcgccgac tcataggttt cgcgcagttc aaaatcgacg
     1561 cctttagcga tgagctgcag ggtgtgccgg cgatcgaaag agcgcacgta aagctttgcc
     1621 gcggggcact cggcatgaac gaggtcgacg atgcggcttg cggcctccgg gtcgtcgatg
     1681 cacaccgcga tcagcctcgc ctccctcatg cccgccgcgc gcaagacatc gagccgggta
     1741 ccatcgccgt aatagacctt aaagccgaag cgggcgacgc tctccagcat ctccggatca
     1801 ttgtcgatcg cagtgacatc gataccttcg gcaagcaggc actgggagac gatttggccg
     1861 aagcgaccaa aaccgatgac cagcaccgac ccgcgcgcat cggagaaatc gtcaggctcg
     1921 cgaagatcgg gccccgagaa ccggcgcatg aattcattcg tgaacgaggc gacgaatggt
     1981 ccgagaagca tggtgatcgc ggcgatggcg gtaaggatac tggcctgtcg ggtatcgagc
     2041 acgtcgagcg aggcggcgag tggaatgagc acgaaggcga actcgccggc gcccgtgagc
     2101 accgagccgg cgcgcagcgc atcccaccga tgcccgcagg tcgcgcggaa caatagccac
     2161 acgatcgccg ccttgagcgc cgtgatcaat acggctgcgg cgacgatcag ccaaagattg
     2221 tcgcgcacaa cggcaaggtc gatgctcatg ccgatgccca tgaagaacag ggccagcaga
     2281 aggccgcgga atggttcgat gtcggcttcg agttcgtgcc ggtaattcga ttccgcgagc
     2341 agcaagccgg caagaaaagc gccgagcgcc atagacgccc cggctttctg catggtgaag
     2401 gcggcgccga gcacgacgag cagcgcggcc gcggtcatca cctcgcgcga accggtctgc
     2461 gccagcagcc ggaagagtgg attgagcaaa tagcgtccgg cgagaacgat caatgcgatg
     2521 gcgccggcga tgagcgcgac ggcgcgcagc ccatgcccga gttgggtatg cggcccttcg
     2581 ggcgcgag
//
LOCUS       DATCWM010000638         2421 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_517811, whole genome shotgun sequence.
ACCESSION   DATCWM010000638 DATCWM010000000
VERSION     DATCWM010000638.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2421)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2421
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_517811"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1812
                     /locus_tag="VIQ50_12535"
     CDS             <1..1812
                     /locus_tag="VIQ50_12535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011969735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HEY9361256.1"
                     /translation="KFSEPVLATSDAPLLAPTRRTRFYSHGDWREAAVFARAQLSPGQ
                     RVRGPAIIIEPHQTVVVEDGWQAEITAKDHLLLERVVPLQRQSAVGTAADPVMLEIFN
                     NLFMSIAEQMGVSLQNTAYSVNIKERLDFSCAVFDADATLVANAPHMPVHLGSMDRAV
                     ESVIRENKGRIAPGDVYVINAPYNGGTHLPDITVCTPVFDAADSELLFWVASRGHHAD
                     VGGISPGSMSPNATTIEEEGVYIDNFKLVDRGRFREQALYDLLTGAKYPARNPLQNVN
                     DIKAQIAANEKGVQELHKMVAYFTLPVVKAYMQHVQDNAAESVRRVIDRIHDASFEYE
                     MDQGTWIKVKIRVDKGKREATVDFTGTSPQQNTNFNAPEPVTRAAVLYVFRVMVDDEI
                     PMNGGCLRPINIIIPKQSMLSPIYPAAVVAGNVETSQAVTNCLFGALGALAAAQGSMN
                     NLNFGNDKYQYYETICSGSPAGPGFPGTDAVHTHMTNTRLTDPEVLEFRYPVVLEDFH
                     IRKGSGGRGRWNAGDGVRRTIRFLEKMDCTILSGHRRVRPFGLAGGEAGQIGENAVRR
                     KNGRIEKLEGADATVIDAGEAIIIQPPTAGGYGKTQG"
     gene            2154..>2421
                     /locus_tag="VIQ50_12540"
     CDS             2154..>2421
                     /locus_tag="VIQ50_12540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018262074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEY9361257.1"
                     /translation="MQSAALRHAIRDLVLANTILARDGVIDDFGHVGVRHPENLDRYL
                     MSRSRSPAIVPAEDIVEFMLDGKPVDQMGRAMYAERPIHGEALSS"
BASE COUNT          489 a          795 c          735 g          402 t
ORIGIN      
        1 aagttcagcg agccggtgct ggccacgagc gacgcaccgt tgcttgcccc cacgcgacgc
       61 acgcgcttct attcgcacgg ggactggcgc gaggccgcgg tcttcgcccg cgcgcagctc
      121 tcgcccggcc agcgtgtgcg cggtcccgcc atcatcatcg aaccgcacca gaccgtcgtg
      181 gtggaggacg gctggcaagc cgaaatcacc gccaaggacc accttctgct cgagcgcgtc
      241 gtgccgctcc aacggcagag cgcggtcggc accgccgccg acccggtgat gctcgagata
      301 ttcaacaatc tgttcatgtc gatcgccgag caaatgggcg tgtcgctgca gaacaccgcc
      361 tattcggtca acatcaagga gcggctcgac ttctcctgcg cggtattcga cgccgacgcc
      421 acgctggtcg ccaacgcgcc gcacatgccg gtgcatcttg gctcgatgga ccgcgccgtc
      481 gaaagcgtca tccgcgaaaa caagggcagg atcgcccccg gcgacgtcta cgtcatcaac
      541 gcgccctaca acggcggcac gcatctgccc gacatcaccg tgtgcacgcc ggtgttcgat
      601 gccgccgaca gcgagctctt gttctgggtc gcctcgcgcg gccatcacgc cgacgtcggc
      661 ggcatttcgc cgggctcgat gtcgccgaac gcaaccacca tcgaggagga aggcgtctat
      721 atcgacaact tcaagctggt ggaccgcggc cgcttccgcg agcaggcgct ctacgacctt
      781 ctcaccggcg ctaaatatcc cgcccgcaat ccactgcaga acgtcaatga catcaaggcg
      841 cagatcgcgg ccaacgagaa gggcgtgcaa gagctgcaca agatggtcgc gtatttcacg
      901 ctgccggtgg tgaaggcata catgcagcac gtgcaggaca acgcggccga gagcgttcgc
      961 cgcgtgatcg accgcatcca cgacgcctca ttcgaatacg agatggacca aggcacctgg
     1021 atcaaggtca agatccgcgt cgacaagggc aagcgcgagg ctacggtgga tttcaccggc
     1081 acgtcgccgc agcagaacac caatttcaac gcgcccgagc cggtcacccg cgccgccgtg
     1141 ctctacgtct ttcgcgtgat ggtcgatgac gagatcccga tgaacggcgg ttgcctgcga
     1201 ccgatcaaca tcatcattcc gaagcaatcg atgctgtcgc cgatctatcc cgccgcggtc
     1261 gtcgccggca acgtggaaac ctcgcaggcc gtgaccaact gtttgttcgg cgcgctcggc
     1321 gcgcttgccg cggcgcaggg aagcatgaac aacctcaatt tcggcaacga caaataccaa
     1381 tactacgaga cgatatgctc gggctcgccg gcgggcccgg gctttcccgg caccgacgcg
     1441 gtgcacaccc acatgaccaa tacgcgcctg accgacccgg aggtgctcga gtttcgctac
     1501 cccgtcgtgc ttgaggattt ccacattcgc aaaggctcgg gtgggcgcgg ccgctggaat
     1561 gccggggatg gggtgcgccg aaccattcgc tttctggaaa agatggactg cacgattctc
     1621 tcaggccacc gccgcgtgcg cccgttcggc ctcgccgggg gcgaggccgg tcagatcggc
     1681 gagaatgccg tgcggcgcaa aaacggccgg atcgagaagc ttgagggcgc cgacgccacc
     1741 gtcatcgatg ccggcgaggc gatcatcatc cagccgccga ccgcgggcgg atacggcaag
     1801 acgcaggggt aagcgccatc cgtcggaggc tttcgaacaa aaaaattgga taatgctcag
     1861 tcctccgacg caccctcgat ggcgatattc gccaacttcg gtttgacgct ggcctcatat
     1921 ctgcaaatta cggtcgcgtc caaatggacg atcgcactcg caagcttgcc gtcgcgccac
     1981 agggtgaacg aattcgcgga gaaaaatcgc tgatgagcga aaggagctcc aagttagcgt
     2041 cggcagtgtc cacgttgccg ctggcaatgg cgccgatccg cggaaattcg acaacccgca
     2101 ggagcttttc gcggcagcga cgaggtccat aaacacggga ggaggaaagg cccgtgcaat
     2161 cagccgcgct ccggcacgcg attcgcgatc ttgtgctcgc caacaccatc cttgcacgcg
     2221 acggcgtcat cgacgatttc ggacatgtcg gcgtccgtca cccagagaat ctcgatcgct
     2281 atctgatgtc acgctcacgc tcgccggcca ttgtccccgc agaggacatc gtggagttca
     2341 tgctggacgg caagccggtc gaccagatgg gacgggcgat gtatgctgaa cggccgatcc
     2401 atggtgaggc cctatcgagc g
//
LOCUS       DATCWM010000639         2990 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_355657, whole genome shotgun sequence.
ACCESSION   DATCWM010000639 DATCWM010000000
VERSION     DATCWM010000639.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2990)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2990)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2990
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_355657"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            41..277
                     /locus_tag="VIQ50_12545"
     CDS             41..277
                     /locus_tag="VIQ50_12545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361258.1"
                     /translation="MIRRPAEIARRSAKALKARPRGAFRRETFALPREKAREKAREMF
                     RRFPKAAYMTEIESWRELPGDRIEFTMRRLPSAD"
     gene            297..1064
                     /locus_tag="VIQ50_12550"
     CDS             297..1064
                     /locus_tag="VIQ50_12550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007607047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEY9361259.1"
                     /translation="MLQSLSAALAEISLPQLALIAGMALIASVIGGVAGYGTGVLLPL
                     VLVPIVGAEPVVPIISLSALLTNTGRAAAFWGRVDGRRVVIVLLAAVPTCVLGAWGYT
                     MLTGKGAALVIGAMLVATVPLRRLMRRRGLALSSRGLAAASFGWGPLAGGTVGAGILL
                     LSLLMAAGLEGAAVVATDAVISIGIGLAKLMTFGLAGVVNATVVAIALLIGGVAFPGA
                     FLAKRLTERLPLHVHTAILDAVVIAGGAAMILNAFAR"
     gene            complement(1073..1966)
                     /gene="hemF"
                     /locus_tag="VIQ50_12555"
     CDS             complement(1073..1966)
                     /gene="hemF"
                     /locus_tag="VIQ50_12555"
                     /EC_number="1.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012042500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004109 - coproporphyrinogen oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-dependent coproporphyrinogen oxidase"
                     /protein_id="HEY9361260.1"
                     /translation="MSESALDGRKARARTWFEALRDDICAALETVETDLPRHAALANR
                     AAGRFVRTPWTRADHSGAAGGGGVMASMSGRVFEKVGVHVSTVFGEFAPEFRQDIPGA
                     ETDPRFWASGISLIAHPQNPHVPAVHMNTRFVVTTKAWFGGGADLTPVLDVRRRQDDP
                     DTIRFHAAMKAACDAHAPVAPYAKFKQWCDEYFYLRHRQEMRGVGGIFFDYLDSADWE
                     ADFAFTREVGRAFIAIYPELVRRNFATPWNDAEREEQLVRRGRYVEFNLLYDRGTVFG
                     LRTGGNVEAILSSLPPLVKWP"
     gene            complement(2363..2830)
                     /locus_tag="VIQ50_12560"
     CDS             complement(2363..2830)
                     /locus_tag="VIQ50_12560"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008175 - tRNA methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(34)-2'-O)-methyltransferase"
                     /protein_id="HEY9361261.1"
                     /translation="MRIALYEPDIPQNTGTILRLAACLGLEAHIIEPAGFPTSDRAFR
                     RAGMDYLDQVSIVRHAGWAAFEGWRAGAAARLLLFTTRAPHSYFAHAFERGDVLLFGR
                     ETSGVPEKVHTAADARLRIPMREGLRSLNVAVAAAMAVGEAIRQTGAHTVGES"
BASE COUNT          462 a          958 c         1012 g          558 t
ORIGIN      
        1 ctccgcggag cattccgcat tacatttgcc tgggatgaac atgatccgcc gccccgccga
       61 gattgcccgc cgctcggcca aagcgctcaa agcgcgcccg cgcggcgcat tccggcgcga
      121 gaccttcgcg ctaccgcgcg agaaagcgcg cgaaaaggcg cgtgaaatgt ttcgccgctt
      181 tcccaaggcc gcctacatga ccgagatcga atcctggcgt gaactccccg gcgatcgcat
      241 cgaattcacc atgcgccggc tcccaagcgc ggattgacgc gccgaggcac ggcgcgatgc
      301 tccaatcgct gtccgcggcg cttgccgaaa tctcgctgcc tcagctcgcc ctgattgcgg
      361 gaatggcgct gatcgcttcc gtcatcggcg gggtcgccgg gtacggcact ggcgtgctgc
      421 tgccgctggt gctggtgccc atcgtcggtg ccgagccggt ggtgcccatc atttcgctct
      481 cggcgctttt gaccaatacc ggtcgggcgg cggcgttttg gggtcgcgtc gatggacggc
      541 gcgtggtgat cgtgctcctc gccgcggtgc cgacctgcgt gctcggcgcc tggggctata
      601 ccatgctcac cggcaaaggc gccgcgctgg tgatcggcgc gatgctggtt gcgaccgtgc
      661 cgctgcggcg gctgatgcgc cggcgcggac tggcgctgtc gagccgcgga ttggcggcgg
      721 cctcgttcgg ctgggggccg ctcgcgggcg ggaccgtggg tgccggcatc ctcctgctct
      781 cgctcttgat ggcggcaggg ctcgaagggg ccgcggtggt cgcgaccgat gccgtgatct
      841 cgatcggcat cgggctcgca aagctgatga cattcgggct cgccggcgtg gtgaacgcga
      901 cggtcgtcgc aatcgcactg ctcatcggcg gcgtggcttt tcccggcgcc tttttggcca
      961 agcggctgac cgagcgcttg ccgctgcatg tccacaccgc aatcctcgac gcggtcgtga
     1021 tcgccggcgg cgcggcgatg atcctcaacg cgttcgcgcg ttgaggcgcg gcttaaggcc
     1081 acttcaccag cggcggcagc gaggagagga tcgcctcgac attgccgcca gtgcgcagtc
     1141 cgaacacggt gccgcggtcg tagagcaggt tgaactccac gtagcggccg cggcgcacga
     1201 gttgctcctc gcgctcggcg tcgttccagg gcgtggcgaa attcctgcgc accagctcgg
     1261 gatagattgc gatgaaggcg cggcccacct cgcgagtgaa ggcgaaatcc gcctcccagt
     1321 cggcgctgtc gagatagtcg aaaaagatgc cgccgactcc gcgcatctct tggcgatgcc
     1381 gcaagtagaa gtattcatcg caccattgct tgaatttcgc atagggcgca acgggggcgt
     1441 gcgcatcgca cgctgctttc atcgccgcat ggaaccggat cgtatccggg tcgtcttgcc
     1501 ggcggcgcac gtcgagcacg ggcgtcaaat ccgcgccgcc gccgaaccag gccttggtgg
     1561 tcacgacgaa gcgcgtgttc atgtggaccg ccggcacgtg cgggttttgc ggatgggcga
     1621 tgagcgaaat gccggaggcc caaaaccgcg ggtcggtttc ggccccggga atgtcctgac
     1681 ggaattcggg cgcaaactcg ccgaacacgg tcgatacgtg cacgccgact ttctcgaaca
     1741 cgcgaccgct catgctggcc atcacgccgc caccgccggc tgcgccgctg tgatcggcgc
     1801 gcgtccaggg cgtgcgaacg aatcgaccgg ccgcgcggtt ggcgagtgcc gcgtgcctcg
     1861 gcaagtctgt ttccaccgtc tcgagcgcgg cgcagatgtc gtcgcgcaac gcttcgaacc
     1921 aggttcgcgc gcgtgccttg cgaccgtcga gcgcgctctc gctcatcgga cctccgtctt
     1981 tcctttaggg catgctcgcc gggccgtcac tatcgccaac gccgtcgcgc acggtgcgcg
     2041 caacgtttgc tggaagactt aagcgcgagc tttattttgc cattgtttgg gccggggaaa
     2101 attccagccg aagctttatt ttgccattgt ttcgggaaac cctgtcggcg tgggggacgt
     2161 tgggggtgtg atgtccgctc ccgcttgcgt ggggactttg gcaggcggtg agttagcgac
     2221 agagcgccgc gagcgatgcg ggtgaggggt agcgccttgg ggcgtgagaa tgtccctcac
     2281 ccgcttcgtc ttttgtgact gtctttcttt tccgaattgt cttcgaggat ttgtcgcgcg
     2341 ccccgcgtcg ttgcgacccg gcttagctct cgccgaccgt gtgtgcgccc gtttggcgga
     2401 tggcttcacc gacggccatg gcagcggcca ccgcaacatt gagcgagcgc aacccttctc
     2461 gcattggaat gcgcagccgc gcgtcggccg ccgtgtgcac cttctcaggc actcccgacg
     2521 tttcccggcc gaacagcaag acgtcgcccc gctcgaatgc atgcgcaaaa taggagtggg
     2581 gggcgcgcgt ggtgaagaga aggagccgcg cggcggcgcc ggcgcgccag ccctcaaacg
     2641 ccgcccaacc ggcatgacgg acgatgctga cctgatcgag gtaatccatg ccggcacggc
     2701 ggaaagcccg gtcgctggtg ggaaagccgg cgggttcgat gatgtgcgcc tcgaggccga
     2761 gacaagcggc aagacgaagg atcgtgcccg tgttctgggg aatatcgggc tcataaagcg
     2821 cgatgcgcag gggcaggatt gcggacatgc gacaacgcta atcttatgac ggacaaatga
     2881 cttgtgcgac ctttggtcgt tgcgtcagag gcccgcattg cccacttgcg ctcccctggc
     2941 aagggtgcca ataaacgccg ctggatgaag ccgcttggcc cctcgcttgc
//
LOCUS       DATCWM010000640         4039 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_128988, whole genome shotgun sequence.
ACCESSION   DATCWM010000640 DATCWM010000000
VERSION     DATCWM010000640.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4039
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128988"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1413)
                     /locus_tag="VIQ50_12565"
     CDS             complement(<1..1413)
                     /locus_tag="VIQ50_12565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020096225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="B12-binding domain-containing radical SAM
                     protein"
                     /protein_id="HEY9361262.1"
                     /translation="MRSSVPVTNRRRILCVFPRYTPAFGTFNHAYRLMKGVRAFMPPQ
                     GLLLIAAYMPQTWPVRFIDENVRKATEADFAWADAVLVSGMHVQAPQIHDTANRAHAA
                     GKVVMLGGPSASASPEMYADIDYLHIGEMGDATDALIARLDESIDRPATQLRFETKDR
                     LPLQDFPIPAYDMIPLKNYLMLTLQFSSGCPYLCEFCDIPNLYGRQPRLKTPAQITAE
                     LDAMRKQKGHPPVVYFVDDNFIGNRKAAKDMLPHLLAWQRQHGYPMQFACEATLNIAK
                     QPEILKLMRECLFLGLFVGIETPETDALKAMRKNQNVAVPMMESIKTLNDYGLEVTSG
                     IIIGLDTDSDDTETRLKDFIDLSQIPMLTINLLQALPKTPLWDRLKAAGRLETDPGLE
                     SNVRFARPYDEVVAMWRRCIAYANDPERLFARFRHQMDATYVNRMIPPARGRLNWDNL
                     SSALVLAVRLVLHVGILSDYR"
     gene            complement(1597..2436)
                     /locus_tag="VIQ50_12570"
     CDS             complement(1597..2436)
                     /locus_tag="VIQ50_12570"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9361263.1"
                     /translation="MARMLSDGVSRSLRQSVVVENLPGASGILAHQAVARAASDGYTF
                     LFTNTSGMAINLISFKQLPYDPTRDFAAVAMVCSQAPQMVSVNTELPVQSLTQLIAHA
                     KANRGKLSMAFDTTAGAAAFAAKLFNRRADLGLVEVPYRSAAQMTQDVASGVNQVMMS
                     SIAAARSIVETGQVRRIAITSARRFRGLPDLPTVGETLPGVVLEGFFAVVGPAGMPPE
                     IIARLNREIAEYLNGAEIQQRLIAFGLDTDGAGTPEGTAQSIHELQEHWRALAKELDI
                     QPQ"
     gene            2861..3616
                     /locus_tag="VIQ50_12575"
     CDS             2861..3616
                     /locus_tag="VIQ50_12575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEY9361264.1"
                     /translation="MFLTTEFALLLGIGFVAQLVDGALGMAYGVLANTAMLSMGLPPA
                     QASALVHTAEVFTTGASAASHIYHRNVDWRMVTRLGVTGALGGILGAWILSNLEVAAA
                     RRLVYVYLLLMGFYILWRSMRIALAPRRPSGWLMPLGLLAGFLDATGGGGWGPVTTST
                     LIGSGHAPRQTVGSVNTTEFFVTVATAATFFVELGASPLEHLIPLVLGGVLAAPFGGW
                     AVKHIWPRTLMVAVGLLIVVLSVFQLARTFRFI"
     gene            complement(3722..>4039)
                     /locus_tag="VIQ50_12580"
     CDS             complement(3722..>4039)
                     /locus_tag="VIQ50_12580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012329651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9361265.1"
                     /translation="NNKRPPLDEMMKNNVWFDTCVYHQPGIDLLTKVVPIENILFASE
                     MVGAVRGKDPQTRYDFDDTKRYVEGTPGLSVDDKKKIFEGNALRAYPRLKSKLSARTA
                     ART"
BASE COUNT          736 a         1260 c         1250 g          793 t
ORIGIN      
        1 gcggtaatcc gagaggatgc cgacgtgcag cacgagacgg acggccagca ccagcgcact
       61 cgacagattg tcccagttca gtctgccgcg cgcaggtggg atcattcgat tgacgtaggt
      121 cgcatccatc tgatgacgga agcgtgcgaa caaccgctcc ggatcgttcg cataggcgat
      181 gcagcgccgc cacatcgcca ccacctcgtc gtacggccgc gcaaaacgca cgttgctttc
      241 gaggcccgga tcggtttcca gccgacccgc cgccttcagc cgatcccaca acggcgtctt
      301 cggcagcgcc tgtaagagat tgatggtcag catcggaatt tgcgaaaggt cgatgaaatc
      361 cttgagccgc gtctcggtgt catcggaatc agtgtcgagc ccgataatga tgccggaggt
      421 gacctccaac ccataatcgt tgagcgtctt gatcgactcc atcatcggca cagcgacgtt
      481 ctggttcttg cgcatcgcct tgagcgcgtc ggtctcgggc gtctcgatgc cgacgaagag
      541 gcccaggaac aagcactccc gcatcagctt gaggatttcc ggctgcttgg cgatgttgag
      601 cgtggcctcg caggcgaact gcatggggta gccgtgctgc cgctgccaag cgagcagatg
      661 cggcagcata tccttcgcgg ctttgcggtt gccgatgaaa ttgtcgtcga cgaaatagac
      721 caccggcgga tgccctttct gcttgcgcat ggcatcgagc tcggcggtga tctgagcagg
      781 cgtcttgagc cgtggctgcc ggccgtaaag gttgggaata tcgcagaact cgcagagata
      841 gggacagccg ctcgagaact gcaacgtcag catcagatag ttcttcagcg ggatcatgtc
      901 gtaggccgga attgggaaat cctgcagcgg cagccgatcc ttggtttcga agcgcagctg
      961 cgtggccggc cgatcgatgc tctcatcgag gcgcgcgatg agcgcatccg tggcatcccc
     1021 catttcgccg atgtgcagat agtcgatgtc cgcgtacatc tccggcgatg ccgatgccga
     1081 cggcccgccc aacatcacca ccttgccggc cgcatgcgcg cggttggcgg tatcgtggat
     1141 ctgcggcgcc tgaacgtgca tgccgctgac cagcacagcg tcggcccagg cgaaatcggc
     1201 ctcagtcgcc ttgcggacgt tctcgtcgat gaagcggacc ggccacgtct gcggcatgta
     1261 ggcggcgatc agcagcaggc cctgcggtgg catgaacgcc cgcacccctt tcatcagccg
     1321 ataggcatga ttgaaggtgc caaacgcggg ggtatagcgc gggaaaacgc acagtatccg
     1381 gcgccggttc gtgactggga ccgatgagcg cacgcggccc tccgccctgc gtggactcca
     1441 tcgtcgcttt cctaggggga agacgcaagg ggcgtccaac caagaacaag cgaatgggct
     1501 ccggccatcg gatgggggtc tccattcctt cctgcaccag tgttccgcaa aacactgcga
     1561 gaatggaaca ccaacgcttc cgtcgacggg cgcccgtcac tgcggctgga tgtcgagctc
     1621 tttcgccagc gcgcgccagt gctcctgcag ctcgtggatc gattgcgccg tgccttcggg
     1681 cgtgccagcg ccatcggtat cgagaccgaa ggcaatcaat ctttgctgga tctcggcacc
     1741 gttcagatac tccgcgatct cccggttcag gcgcgcgatg atctcaggcg gcatgccggc
     1801 gggcccgacc acggcgaaaa atccctctag aaccactccg ggcagggttt cgccgaccgt
     1861 cggcagatcg ggaagaccgc gaaagcgccg cgcagaggtt atggcgatgc gccggacctg
     1921 accggtctcg acgatcgatc gcgcggccgc aatggagctc atcatcacct ggttgacgcc
     1981 gcttgcgacg tcctgggtca tttgtgcggc tgagcgatag ggcacctcga ccaggcccag
     2041 gtcggcacgc cggttgaata gcttggcggc gaacgccgcc gcgccagccg tcgtgtcgaa
     2101 ggccatcgat agcttgccac gattcgcctt cgcatgagca atgagctgtg tcagcgattg
     2161 caccggcagc tctgtgttca ccgacaccat ctgcggggct tgactgcaaa ccatcgccac
     2221 cgccgcgaaa tcccgcgtcg ggtcgtaggg cagttgtttg aacgatatca ggttgattgc
     2281 catgccagac gtgttggtga acagaaacgt gtagccgtca gacgcggcac gggcgaccgc
     2341 ctgatgcgcc aggatgcccg aggcacccgg caggttctca accaccacgg actgtcgcag
     2401 actgcgcgaa acaccgtcgc tcaacatccg cgccatcaca tccgtcgcag cgcccggtcc
     2461 ggtcggaaca atgagcttga tgggacgcgt gggccacgtt ccctcgccgg catgcgcagc
     2521 cgctagcagg accgcataac aaagcagcac gcgcaaaacc cttttcatgc atccctcagc
     2581 actgcatgct catcttgcgc gagcacatag gatccggtga gtgtagcttt ttttgctccg
     2641 gatccatctg ccgtacggta cacgcttgag gtggttgaaa tgcttggcgt attgccgaga
     2701 aatgtccgtt gtccgtccca accgccacgc ggccgttgca ggtagtccta taggatgcaa
     2761 ttgaacgcca gagcaaaccg cgccgcaaca gcgaccgtgc ggcgtgagcg tcattgccga
     2821 ccgcagtgca tgacagaaag agatacaaag agaggggcaa atgtttttga ccaccgagtt
     2881 cgcactgctg ctcggaatcg gatttgttgc acagttggtg gacggcgcgc tgggcatggc
     2941 atacggcgtg ctggcgaaca ccgcgatgct gagcatgggc ctacctccgg cgcaggcgag
     3001 tgcgctagtc cacaccgccg aggtttttac cacgggcgct tcggctgctt cgcacatcta
     3061 tcatcgtaac gtggattggc ggatggtgac gcgcctggga gtgaccggcg cgctgggcgg
     3121 tatcctgggt gcctggatct tgtcgaatct cgaggtcgct gccgcacgcc gactggtcta
     3181 cgtctatctg ctgctcatgg ggttctacat cctctggcgc tcgatgcgga tcgcgttggc
     3241 gccgcgaagg ccctcaggat ggcttatgcc gctcggattg ctggcgggat ttctcgacgc
     3301 aaccggcggc ggcggctggg ggcccgtaac cacctccacc cttatcggct cgggccacgc
     3361 gccgcgccaa accgtcggct cggtcaacac caccgaattt tttgtcaccg ttgcgaccgc
     3421 ggccaccttc tttgttgagc tcggggcctc accgctcgag cacctcattc ccctcgtgct
     3481 gggaggcgtg ctggcggcgc cgttcggtgg ctgggcggtg aagcacatat ggccccggac
     3541 gttgatggtc gccgtgggcc tgctgatcgt ggttctctcc gtgtttcagc tcgcccgcac
     3601 cttccgcttc atctagttcg gcagccagcc gcgccactga aaaaccgtcg gcaaacagcc
     3661 cttggctggc tgccccgggc ggaaaaggaa tgtgcgctat ctggtgatcc ccgtggcttg
     3721 cttacgtgcg cgccgcggtc cgggcggaca gtttgctctt gaggcgcgga taggcgcgca
     3781 gcgcattgcc ctcaaagatc tttttcttgt catcgaccga aagccccggg gtcccctcga
     3841 catagcgctt ggtatcgtcg aaatcgtatc gcgtctgcgg atccttgccg cgcaccgcgc
     3901 cgaccatttc ggatgcgaac aggatgttct cgatcggcac caccttggtc aaaagatcga
     3961 tccccggctg atgatagacg caggtgtcga accacacgtt gttcttcatc atctcgtcga
     4021 gcggcggccg cttgttgtt
//
LOCUS       DATCWM010000641         2785 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_377343, whole genome shotgun sequence.
ACCESSION   DATCWM010000641 DATCWM010000000
VERSION     DATCWM010000641.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2785)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2785)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2785
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_377343"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..318)
                     /locus_tag="VIQ50_12585"
     CDS             complement(<1..318)
                     /locus_tag="VIQ50_12585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003525454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043743 - LPPG:FO 2-phospho-L-lactate
                     transferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-phospho-L-lactate transferase CofD family
                     protein"
                     /protein_id="HEY9361266.1"
                     /translation="MSTAGNGRKSRVVALCGGIGGAKLALGLSRLLGGDLMVVVNTGD
                     DFEHLGLAISPDLDTVMYTLAGLDDSQRGWGRRNETWTFMAALAALGGETWFALGDGD
                     LATN"
     gene            complement(315..1076)
                     /gene="cofE"
                     /locus_tag="VIQ50_12590"
     CDS             complement(315..1076)
                     /gene="cofE"
                     /locus_tag="VIQ50_12590"
                     /EC_number="6.3.2.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043773 - coenzyme F420-0 gamma-glutamyl
                     ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="coenzyme F420-0:L-glutamate ligase"
                     /protein_id="HEY9361267.1"
                     /translation="MVITLTSVPGIPMVRPGDDLAALLVAACERNALAPADGDILVVA
                     QKIVSKAEGRYVDLAKVRPSAHAVALAAEVKKDPRLVEVILAESRRVVRKKAGVLIVE
                     HRLGFIMANAGVDRSNIDPGVAADPVLLLPSDPDASAARLHQRLTAQFRKRLGVIITD
                     SWGRAWRHGTVGVALGVAGLPALIDMRGCPDLFGRELHVTQTGFADEIASAASLLMGQ
                     ADEARPMVLLRGLAWADAPAPAATLLRPPEEDLFR"
     gene            1225..1623
                     /locus_tag="VIQ50_12595"
     CDS             1225..1623
                     /locus_tag="VIQ50_12595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEY9361268.1"
                     /translation="MRPIPLGAKGTFTLRVRPGHLANQFKDAMLPPVFATPMMILAME
                     NAALNAIRGYLDPGESAVGTAVDVRHLAATPVGHAVTAEAEVTRVDGRRVAFNVTARD
                     EKEEIGRGTHERMVIDIRRLGERLSAKSKA"
     gene            complement(1800..>2785)
                     /locus_tag="VIQ50_12600"
     CDS             complement(1800..>2785)
                     /locus_tag="VIQ50_12600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361269.1"
                     /translation="QGTRDASFPVGMRQLEYIDAHGGGRHLALTVFYPAIGSPAAARF
                     VMPFFANLTLYNDAEPAFDNIKRPLVMFSHGRGSNGLYYAWFGEFLASRGYIVAALNH
                     YRANTYDATIAYLANKLWQRPRDIALSISFLLDDPFWGNLIDASRIGVAGHSQGGFTA
                     LWVGGARVDPEKYLAFQQGWRNNPMVPGHLRNELPLDATPALDVHDKRIKAVFAMAPG
                     IIQAFGMDAAGLRQLAVPTYITVGAGDTQAPPKDNAEFAARHIAHAELDVLPGRVDHD
                     IFVNECNEEGKNEFPQACVDAPGIDRHTIHARIGEAAVKFFDKALNVPHDK"
BASE COUNT          487 a          893 c          940 g          465 t
ORIGIN      
        1 gttggtggcg aggtcgccgt cgccgagcgc aaaccaggtc tcgccgccga gcgccgcgag
       61 cgcggccatg aacgtccatg tctcattgcg ccggccccaa ccgcgttgcg aatcgtcgag
      121 gccggccagc gtgtacatga ccgtgtcgag atcgggcgaa atggcgagcc caagatgctc
      181 gaaatcgtcg ccggtattga cgaccaccat gagatcgccg cccaggaggc ggctgaggcc
      241 gagagcgagc ttggcgccgc cgatcccccc gcacagcgca acgacgcggc tcttgcgacc
      301 attgccggcg gtgctcaccg gaacaaatcc tcttccggcg ggcgtagcag cgtggcggcc
      361 ggcgcgggcg cgtccgccca cgcgaggccg cgcaggagca ccatcggtct tgcctcgtcc
      421 gcttggccca taaggagcga tgcggcgctg gcgatctcgt cggcaaatcc ggtttgcgtg
      481 acgtgcaact cgcggccgaa caggtccggg cacccgcgca tgtcgataag cgcgggcagt
      541 cccgccacgc cgagggcgac cccgaccgtg ccgtgtcgcc aggcgcgccc ccagctgtcg
      601 gtgatgatga cgccaagccg cttgcgaaat tgcgcggtga gccgttggtg cagtctagcc
      661 gcggaggcat ccggatcgct cggcagcaac agcacagggt cggcggcgac acccggatcg
      721 atgttggagc gatcgacgcc ggcattcgcc atgatgaagc cgagccggtg ctcgacgatc
      781 agcacgcctg ccttctttcg caccacgcgc cgggattccg cgagaatgac ttcgaccaga
      841 cgcggatcct ttttcacctc ggcggcgaga gcgacggcat gcgcggaggg tcggaccttt
      901 gcgagatcga cgtagcgccc ctccgccttg gacacgatct tctgggccac caccaggatg
      961 tcgccgtccg ccggcgcaag ggcattgcgc tcgcaagcgg cgaccagaag cgcggcaagg
     1021 tcgtcgcccg gccgcaccat gggaatgccg ggaaccgacg tcagcgtgat caccattcct
     1081 ggcggcctcg gttgggagtg caagcaccgt cactctagca acgaaccacg cgtggttcac
     1141 cgctgggctg ttcccgggaa ggctgggcta ggcgaatgcc gcctgcgggg atgatcctgc
     1201 gtggtgaaac acctatgatg acgcatgcgc ccgattccgc tgggagcgaa gggaacattc
     1261 acgctgcggg tgaggcccgg gcacctcgcc aatcagttca aggacgcaat gcttcctccc
     1321 gtattcgcca cgccgatgat gatcttggcg atggagaacg cggcgctcaa cgccatccgc
     1381 ggctatctcg atcccggcga gagtgcggtc ggcaccgccg tcgacgtccg ccatctggcg
     1441 gcgacgccgg tcgggcacgc cgtgacggcg gaagccgagg tcacccgcgt cgacggccgg
     1501 cgcgtcgcgt tcaacgtcac agcgcgcgac gagaaggagg agatcggccg cggtacgcat
     1561 gagcgcatgg tcattgacat ccgccgcctt ggtgagcggc tgtccgccaa atccaaggcg
     1621 tgattagctt catccaaaga gaaagatggc tctcgtcatg cgcgtccacg tcttgttttc
     1681 cacggcaaag acgtggatgg ccgggacata agcgcgttca cgcgcgtctt cccgacgcgc
     1741 tatgccggcc atgacgggct tgaggcttac ggcaccggca cgactaagtc gtaacgcgat
     1801 cacttgtcgt gcggcacgtt tagggcctta tcgaagaact tcaccgccgc ctcgccgatc
     1861 cgcgcatgga tcgtgtggcg atcgatgccc ggagcgtcga cgcaggcctg gggaaattcg
     1921 tttttcccct cctcgttgca ctcgttgacg aagatatcgt ggtcgactcg gcccggcagc
     1981 acgtcaagct cggcgtgtgc aatgtgccgg gcggcgaact cggcgttgtc cttgggcggc
     2041 gcctgggtgt cgccggcgcc gaccgtgatg taggtcggaa ccgcgagctg ccgcaacccg
     2101 gctgcatcca tgccgaaggc ctggataatt ccgggcgcca tcgcaaatac ggccttgatg
     2161 cgcttgtcgt gtacgtcgag cgccggcgtc gcatcgagcg gcagctcgtt gcgcagatgg
     2221 cccggcacca tcggattgtt gcgccagccc tgttggaagg cgaggtactt ctcgggatcg
     2281 acccttgcgc cgccgaccca cagcgcggtg aagccgccct gcgaatggcc ggctacgccg
     2341 atgcggcttg cgtcgatcag attgccccag aacgggtcgt cgaggagaaa actgatgctc
     2401 agcgcgatgt cgcgcggacg ctgccagagc ttgttagcga gatatgcaat cgtggcgtcg
     2461 taggtgttgg cgcggtaatg attgagcgcg gccacgatgt agccgcgcga cgcgagaaac
     2521 tcgccgaacc aggcatagta gaggccgttg ctgccgcgtc cgtgcgagaa catgacgagc
     2581 ggacgcttga tgttgtcgaa cgccggctcg gcatcgttgt aaagggtgag gttggcgaag
     2641 aacggcatga cgaagcgagc ggcggccggg ctcccgatcg ccgggtaaaa caccgtcagc
     2701 gccagatgcc ggccgccccc atgtgcatcg atgtattcga gctgtcgcat ccctaccggg
     2761 aaggaggcgt cgcgtgtgcc ctgcg
//
LOCUS       DATCWM010000642         2490 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_64136, whole genome shotgun sequence.
ACCESSION   DATCWM010000642 DATCWM010000000
VERSION     DATCWM010000642.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2490)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2490)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2490
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64136"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(30..1118)
                     /gene="lptG"
                     /locus_tag="VIQ50_12605"
     CDS             complement(30..1118)
                     /gene="lptG"
                     /locus_tag="VIQ50_12605"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013913055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HEY9361270.1"
                     /translation="MIAGTLSRYFGRRFLSAVMAVFAGTLVLTAMIDYLELLRRSADI
                     KDVSPLVIAQITLFRVPFITERVMPFAVLVGAMFCYLNLSRRLELAVARAAGISAWQF
                     IAPALIIAGFIGVVLTTVYNPISATLREHSTRLEADLSGRDTGFRSTGRGFWLRQRSE
                     DGQAVINAKSSRQQGIELGGVTVFRFDADGHFRDRIEAKSATLEEGQWRLEEPRFYVS
                     GMAPSERETFLLKTPLTSVQVGESFATPETVPFWELSSYIDHAESAGLAAAGYRLQYY
                     QLLAQPFYLVAMVLLATSVSLRFFRFGGVQKIVLGGIGAGFALYILSKVTGDLSKAGL
                     MGPLIAAGSPPALGAMIGLIALLYQEDG"
     gene            complement(1115..2290)
                     /gene="lptF"
                     /locus_tag="VIQ50_12610"
     CDS             complement(1115..2290)
                     /gene="lptF"
                     /locus_tag="VIQ50_12610"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HEY9361271.1"
                     /translation="MGSIGRYIFRTTLGAFLVICASVTALMWITQALRDIDLMTNQGQ
                     SIFVFIGITGLIIPLLVLIIAPIALMIAVAHVLNKLGNDSELIVMNAAGMPPWVLFRP
                     FLAAGLVVSLLVAAISIYVSPWGLRELRRWATEVRADLVSNIVQPGRFIQLEQRVTLH
                     IRERPPNGQLLGILIDDQRDPKERATILAEQGQIVKNERGAFLVLENGSVQRHETGQR
                     DPALVLFNSYGFDLTWLSNGNQSLKYSVRERYLWELHDASRTDIAFADEPAQVRAELH
                     DRITAPLYPLAFVVLTYAYLGAPRTTRQGRTMSLLGAISAVAALRGLGFVGTIAGVHT
                     PIALLLPYLALMATFVLGYFAISRGVIIEPPVFIANAITRVMERVTQRTNALMGQTS"
BASE COUNT          509 a          776 c          796 g          409 t
ORIGIN      
        1 caatcgcgga cggttgccag cgcgcgccat cacccgtcct cctggtaaag cagcgcgatc
       61 aagccgatca tcgcgcccag ggcggggggc gagcccgctg cgatcaaggg gcccatcagc
      121 ccggctttgc tcaaatctcc ggtgaccttc gacaggatgt agagcgcaaa gccggcgcca
      181 ataccgccca gcacgatctt ctgcacgccc ccgaagcgga aaaaccgcaa actgacggaa
      241 gtggccagca gcaccatcgc cacgagatag aagggttgtg ccaacagctg gtagtactgc
      301 agtcgatagc cagcggccgc caaccctgcg ctttcggcgt ggtcgatata cgacgacagt
      361 tcccagaacg gcacggtctc gggcgtggcg aagctttctc cgacctgcac cgacgtcagg
      421 ggggtcttga gcaggaacgt ctcgcgctcc gagggagcca ttccgctgac gtaaaatcgg
      481 ggctcctcga gccgccactg cccttcctcg agcgttgcgc ttttcgcttc gatgcggtcg
      541 cggaagtggc cgtcggcgtc gaaccggaag acagttactc cgcccagctc gattccctgt
      601 tgccggctgg atttggcgtt gatcacggcc tggccgtctt cgctgcgctg gcgcagccag
      661 aaaccacgtc cggtgctgcg gaagccggtg tcgcgtccgg agagatcggc ctccaggcgc
      721 gtggaatgct cgcgcaaggt cgccgagatc gggttgtaaa ccgtcgtcaa cacgacgccg
      781 atgaagccgg cgatgatgag agcgggcgcg atgaattgcc aggcggagat gcccgccgcc
      841 cttgccaccg cgagctccaa gcggcgcgac aagttcaaat agcaaaacat cgcacccacc
      901 agcacggcga acggcatcac ccgctcggtg atgaagggca cgcgaaacaa ggtgatctgc
      961 gcaatcacca agggcgaaac gtccttgatg tccgccgaac gccgcagcaa ttcgagataa
     1021 tcgatcatcg ccgtcagcac cagcgttcct gcgaacaccg ccatcacggc ggagagaaaa
     1081 cgccgtccga agtatcgcga aagggtgccg gcgatcatga cgtttgaccc atcagcgcgt
     1141 tcgtgcgctg cgtgacgcgc tccatgacgc gggtgattgc attcgcgatg aacacggggg
     1201 gctcgatgat gacgccgcgc gaaatggcga agtagcccag cacgaaggtc gccatcagcg
     1261 cgagataggg aagcagaagg gcgatcgggg tgtgcacccc cgcgatggtg ccgacgaagc
     1321 caaggccgcg cagcgccgcc accgcgctga tcgcgcccag cagcgacatg gtgcgaccct
     1381 gacgggtggt gcgcggcgcg ccgaggtagg cgtaggtcaa cacgacgaag gcaagcgggt
     1441 aaagcggcgc cgtgattcgg tcgtgcaatt cggcgcggac ttgcgccggc tcgtcggcaa
     1501 acgcgatgtc cgtccgcgag gcatcatgaa gctcccagag gtatcgttcc cgcaccgagt
     1561 atttcaggct ctggttgccg ttcgaaagcc aagtcaggtc gaatccatag ctgttgaaca
     1621 gcaccagcgc aggatcccgc tgcccggtct catggcgctg cacgctgccg ttctccagca
     1681 cgagaaaggc gccgcgctcg tttttcacga tctgaccttg ctcggccagg atggtcgccc
     1741 gctctttggg gtcgcgctgg tcgtcgatca agatgccgag caactgtccg ttggggggcc
     1801 gctcgcgaat gtgcagcgtg acccgctgtt ccaattggat gaaacgaccg ggctgcacga
     1861 tgttggagac aaggtcggcg cgaacttcgg ttgcccagcg ccgtagctcg cgcagtcccc
     1921 agggcgagac atagatgctg atcgcggcaa cgagcagcga gacgacgagc ccggcggcca
     1981 ggaacgggcg gaacaggacc cagggcggca ttccggccgc attcatcacg atcagttcgg
     2041 aatcgttgcc gagcttgttg agcacgtgcg caaccgcgat catcagcgcg atcggcgcga
     2101 tgatcagcac gagcagcgga atgatgaggc cggtgattcc gatgaagacg aagatgctct
     2161 ggccctgatt cgtcatcagg tcgatgtcgc gcagcgcctg ggtgatccac atgagcgcgg
     2221 tcacgctggc gcaaatgacc aggaacgcac cgagcgtggt gcgaaaaata tatcggccga
     2281 tggaccccat cgagttgcgc gtccccgctc gcggcgaaag cctcggtgcg acgggccccc
     2341 tatgcccgca gcagtgcacc gatgctaaac gaagcccttt tttaccccgt atttgatccg
     2401 gcaacaaagt ggcttggcca aggcaaaccc tttgactatg cacaacaaaa cgttaatcgg
     2461 cgccgtgtgt ctcggcggcc acaggcgttg
//
LOCUS       DATCWM010000643         3397 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_26389, whole genome shotgun sequence.
ACCESSION   DATCWM010000643 DATCWM010000000
VERSION     DATCWM010000643.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3397)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3397)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3397
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26389"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1011)
                     /locus_tag="VIQ50_12615"
     CDS             complement(<1..1011)
                     /locus_tag="VIQ50_12615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018409019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY9361272.1"
                     /translation="MTLTSSLGKPISRVDGPAKVTGAAKYAAEYNVPGLAHGVVVSST
                     IARGRIKRVHVADALAVEGVLDVFTHEHRPRLASSHEKYTDDIAPSGSPFRPLYDAEI
                     LFNGQPIALVVAEEFEIARFAASLIRVEYEQQAHVTDFDARRERGEVTKRDPAHSKTR
                     GEAAAAFDEAATRIKAEYRMPVEHHNPMEPFAATAIWEGDGRITVFDKTQGPQNCRNF
                     VAGVFEMPRDKVRVLSPYVGGGFGSGLRPQYELPLAVLAALALKRSVRVTLTRQQMFT
                     LGYRAANVHALALGANSDGSLVSLRHDAVAMTSQFEDFQRDFVNWSSLLYRCANVELA
                     QRL"
     gene            complement(1026..2042)
                     /locus_tag="VIQ50_12620"
     CDS             complement(1026..2042)
                     /locus_tag="VIQ50_12620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012605816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HEY9361273.1"
                     /translation="MNSFEYTRAVDIVDAVRQVAADPAAKFIAGGTNLVDLMKENVAR
                     PSRLIDITRLPLDKVEETSDGGLRIGALVANSDLAYDPRIEGRYPLLGSAILAGASQQ
                     LRNMASTGGNLLQRTRCLYFYDTSTPCNKREPGSGCSAIGGVNRMHAILGTSEHCIAT
                     HPSDMCVALAALDARVLATGPAGQRSIAFDAFHRLPGDTPQIDTNLRADEIITAIELP
                     PKGFAKNYTYLKIRDRLSYAFALVSVAVGLDIEGDKIKDARLALGGVAHKPWRDREAE
                     AQLSGASPTRERFVQAAETLLRGARGFGHNDFKIELARRAILRALGQAARGTPQSQAD
                     KRIK"
     gene            complement(2039..2587)
                     /locus_tag="VIQ50_12625"
     CDS             complement(2039..2587)
                     /locus_tag="VIQ50_12625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEY9361274.1"
                     /translation="MAQSSSAARKSSDKRPNPAKVAVTLHVNGIQRKLAIAPWTTLLD
                     ALRLHLDLTGTKKGCDHGQCGACTVLVDGRRIYSCLTLAVMKDGAHVTTIEGLAQGST
                     MHPLQQAFIEHDALQCGYCTPGQICSAAGLIAEGKAGNADEIRELMSGNICRCGAYPN
                     IVAAIEQVMFGKTLETTGEAKR"
     gene            complement(2910..>3397)
                     /locus_tag="VIQ50_12630"
     CDS             complement(2910..>3397)
                     /locus_tag="VIQ50_12630"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEY9361275.1"
                     /translation="LVGPSAEPLAEEAIVAVRATVNGLVFVGLAEGAVLGAAYVIAGV
                     SHPVLFGFATALLATVPFGAPLVVIIACFALLIQSRITAAILLFLFASAVVFVADHFI
                     RPGLIGASTRLPFLWILLGIFGGLETFGLIGLFVGPAIMAAVVAIWREGAKPDRATGR
                     Q"
BASE COUNT          639 a         1018 c         1094 g          646 t
ORIGIN      
        1 gagcctctga gcgagttcga cgtttgcgca gcgatatagc aggctcgacc agttgacgaa
       61 gtcgcgctga aaatcctcga attgcgaggt catggcgacg gcatcgtgtc ggagcgagac
      121 caagcttccg tcgctattgg cgcccaatgc cagcgcgtgg acgtttgcgg cacggtaacc
      181 gagcgtgaac atctgctggc gcgtgagggt gacccgcacc gagcgtttga gcgcgagcgc
      241 tgccagcacg gcgaggggca attcatattg cgggcgcagc ccggatccga acccgccgcc
      301 aacatatggc gagaggacgc gcaccttgtc tcgcggcatt tcgaacacac cggcaacgaa
      361 gttccggcag ttctgtggtc cctgggtctt gtcgaaaacg gtgatgcggc cgtcgccttc
      421 ccatatcgcc gtcgcggcga acggctccat cggattgtgg tgctcgaccg gcatgcgata
      481 ttcggctttg atccgggtcg ccgcctcgtc aaaggctgcc gctgcttccc cgcgcgtttt
      541 ggagtgggcc ggatcccgct tcgtgacctc gccgcgctcg cggcgggcgt cgaaatcggt
      601 cacgtgtgcc tgctgctcat attcgacgcg gatcaaggaa gccgcaaacc gcgcgatctc
      661 gaattcctcg gcgacgacca gtgctatcgg ctgaccattg aaaaggattt cggcgtcata
      721 aagcggacgg aagggtgagc ccgaaggtgc gatgtcgtcg gtatatttct catgcgacga
      781 tgccaatctg ggccgatgct cgtgggtgaa gacgtcgagc acgccctcca ccgccagcgc
      841 atccgcaacg tggacccgct taatgcgacc tctggcaatg gtggacgaga ccacgacgcc
      901 gtgggcgagc ccgggcacgt tgtattcggc cgcgtatttc gcagcgccgg tgaccttggc
      961 aggtccatcg acgcgggaaa tcggtttgcc gagtgaactg gtgagggtca tggcactcca
     1021 ccggcttact tgatgcgctt gtccgcttgc gattgcggcg tcccgcgcgc cgcctggccc
     1081 agcgcacgca gaatggcccg acgcgccagt tcgatcttga agtcgttgtg gccgaagccg
     1141 cgcgcacccc gcagcagcgt ttctgcggcc tgcacgaagc gttcacgcgt cggcgatgct
     1201 ccgctgagct gcgcttcggc ttcacgatcg cgccagggtt tgtgggcgac tccgccaagc
     1261 gccaggcgcg catccttgat tttgtccccc tcgatatcga ggccgaccgc gacggataca
     1321 agggcgaatg catatgacag gcgatcgcga atcttgagat aggtatagtt cttggcgaag
     1381 cctttaggcg gcagttcgat tgctgtgatg atttcgtcgg cacgcagatt ggtgtcgatc
     1441 tgtggggtat cgccgggcaa gcgatggaat gcatcaaagg caatgctgcg ctggccggcg
     1501 ggcccggttg ccagcacgcg cgcatcgagg gcagcgagtg cgacacacat gtccgagggg
     1561 tgcgtggcga tgcagtgctc gctcgttccc agaatcgcgt gcatccggtt gaccccccca
     1621 atcgcggaac aaccgctgcc cggctcgcgc ttattgcacg gtgtgctcgt atcgtagaaa
     1681 tagaggcagc gcgttcgttg caggagattg cctcccgtgg aggccatatt gcgcaattgc
     1741 tgcgaagccc cggccagaat tgcactgccg agcagcggat agcggccctc gatccgcggg
     1801 tcgtaggcga gatcggaatt ggcaaccagt gcgccgatgc gcagcccgcc gtcactcgtc
     1861 tcctcgacct tgtcgagggg cagccgcgtg atgtcgatca gccgtgacgg ccgtgcgaca
     1921 ttttccttca tcaggtcgac caggttcgtc cccccggcaa tgaattttgc cgctgggtcg
     1981 gccgcgacct ggcgcacggc atcgacgatg tcgaccgcgc gggtatattc gaaactgttc
     2041 accgctttgc ctcgccggtt gtctcgaggg ttttgccaaa catgacttgt tcgatggccg
     2101 ccacgatgtt gggatacgcg ccgcaccggc agatattgcc gctcatgagc tcgcggattt
     2161 catcggcatt gccagccttg ccctcggcga tcaggccggc ggcggaacaa atctggcctg
     2221 gggtgcaata gccgcactgg agggcatcgt gctcgatgaa ggcctgctgc aatggatgca
     2281 tcgtgcttcc ttgcgccagg ccctcgatcg tcgtgacgtg cgcgccgtcc ttcatcaccg
     2341 ccaaggtgag gcaggagtag attcgtctgc catcgaccaa aaccgtgcag gccccgcatt
     2401 ggccgtgatc gcagcccttc ttcgtgccgg tgagatcgag atggagacga agcgcgtcga
     2461 gtagcgtggt ccacggtgcg atcgccagtt tgcgctgaat accgttgaca tggagtgtga
     2521 ccgccacctt ggcgggattg ggtcgtttgt ccgaactctt gcgagccgct gaggatgatt
     2581 gagccatcga aattctccgc agaatcgtca ttcgccgggt tcggacgccg gcagcgcggc
     2641 ggaataaata tcctccggat ggccactatg gccgccgcat ggacctgcga ggctagcgtg
     2701 ggggcgcatc aagagggtga gcgcggcgca ctcctgcacc aatttgaccg gcaccggtca
     2761 acgaaggcag tcttgacttg ttccaaacca agcaggaaaa acctcggccc gctgtggcgc
     2821 tcttgctgat actattagat tcttgcgcga tcgtccggcg aattccttga atggaaagcg
     2881 ggacacggcc gtggcgcacc tgtcagggtt tactgccggc ctgtggcgcg gtccggcttg
     2941 gcgccctcgc gccagatggc gacaacagca gccatgatcg ctggtccaac gaacagtccg
     3001 atcaggccaa aggtctccaa acctccgaag atgccgagga ggatccacaa aaagggcagc
     3061 cgggtcgacg cgccgatcaa acccggtcgg ataaaatgat cggcaacgaa taccacggcg
     3121 gacgcgaata ggaaaagcag gatggccgcg gtaatgcggg actgaatgag aagagcgaag
     3181 caagcgatta tgacgacgag cggtgctccg aatggaacgg ttgcgagcag cgccgttgcg
     3241 aatccgaaca gaacaggatg gctcacgccg gcgatgacgt aggccgcgcc gaggactgct
     3301 ccttccgcca atccgacgaa aacgaggccg ttaacggttg ctcgaaccgc gacgatggct
     3361 tcttcggcca gcggctccgc agacgggccg acgagcc
//
LOCUS       DATCWM010000644         2391 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_182959, whole genome shotgun sequence.
ACCESSION   DATCWM010000644 DATCWM010000000
VERSION     DATCWM010000644.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2391)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2391)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2391
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182959"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..265)
                     /locus_tag="VIQ50_12635"
     CDS             complement(<1..265)
                     /locus_tag="VIQ50_12635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361276.1"
                     /translation="MICSINGFGCVEGLLPRVLAATLVVALAGCKTTQPTEMTTALGV
                     PAAEGERSAPSPAERYGAHPDDPDAAINYARALRGNGQYAQVLA"
     gene            426..1811
                     /locus_tag="VIQ50_12640"
     CDS             426..1811
                     /locus_tag="VIQ50_12640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase family protein"
                     /protein_id="HEY9361277.1"
                     /translation="MHPVFLPRGHSVTTVPVTFVNAANWREQRTALEPRARGFADAAA
                     FETKAGRHCLLPDADGGLAGVLFALERPEEPSKDLFWPGALPALLPGGAYRFATAAHD
                     QRLAALAFALGAYRFTRYRKADAKEIKLELPGNVDGDDLSRIVEGVTLARDLINTPAN
                     DLGPAELEAAARTLADRHGAKLRTIVGDDLLQENFPLIHAVGRAAVRPPRLIDLTWGD
                     ASHPKVTLIGKGVCFDSGGLDIKPESGMLNMKKDMGGAAAMLALAHMLMQRAIKLRLR
                     VLIPAVENSISGASFRPRDVYRSRKGLTVEIGNTDAEGRLILADAIALADEEQPDLIA
                     DMATLTGAARVALGTEIPPFYTDDEALAAALADCANSENDPLWRMPLWRPYDALLESK
                     VADVNNVASGNFGGSITAALFLRRFVTAAKAWLHFDVYAWNQATKPGRPEGGECQAAR
                     ALYALLVSRYG"
     gene            1804..>2391
                     /locus_tag="VIQ50_12645"
     CDS             1804..>2391
                     /locus_tag="VIQ50_12645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NlpC/P60 family protein"
                     /protein_id="HEY9361278.1"
                     /translation="MAESQRGAEEVYEVIDATAPLRQAPSPDAPLDTEALKGERVIVA
                     ETEEGWARGKLEADGYVGYLPASALAPPGPPPTHKVAALRTLVFPGPSIKLPPLEGLP
                     LGARLAVARTEGAFTVTAAGGYLPARHLVAIEEMETDFVAVAERFLCAPYLWGGKTSL
                     GLDCSGLVQVALTACGIPCPRDSHMQEKALGHALAP"
BASE COUNT          373 a          861 c          785 g          372 t
ORIGIN      
        1 ccgcgagaac ttgtgcgtac tggccgttgc ctcgcaacgc gcgggcataa ttgatcgcgg
       61 cgtccggatc gtccggatgt gcgccgtagc gctcggctgg gcttggcgcc gaacgctcgc
      121 cttcggcagc gggaacgccg agggcggtcg tcatctccgt cggttgggtc gttttgcagc
      181 cggcgagcgc gaccacaagc gtggcggcga gcaccctcgg cagcaaaccc tcgacgcaac
      241 cgaacccgtt gatcgagcag atcatcacgg ccccgtcggg tgccccagac gggttccggc
      301 aataaagcgt taaccttaac gaatggttaa cgggcgccca cgaggggtta atggcgcccg
      361 cctccgctcg ccttcacccc cgccaaactg cgtgttagca ggagaccttc aggcacggtt
      421 ctcccatgca tcctgtgttc ctcccccgcg gccactcggt cacgacggtc ccggtaacct
      481 tcgttaacgc ggcgaactgg cgcgagcagc ggacggcgct cgagccgcgc gcgcggggct
      541 tcgccgatgc ggccgccttc gagaccaagg cgggccgtca ctgccttctg cccgacgccg
      601 acggcggcct tgccggcgtc ctgttcgcac tcgagcgccc cgaggagccg agcaaggact
      661 tgttttggcc gggcgcgctg ccggcgctgt tgccgggcgg cgcctaccgc ttcgccaccg
      721 cggcgcacga ccaaaggctt gccgcgctcg ccttcgcgct cggtgcctac cgcttcaccc
      781 gctaccgcaa ggcagacgcc aaggagatca agctcgaact gccgggcaac gtcgacggcg
      841 acgatctctc ccgtatcgtc gagggtgtca cgctcgcccg cgatctcatt aacacaccgg
      901 caaacgactt gggcccggcc gagctcgaag cggctgcgcg cacgctcgcc gaccgccacg
      961 gcgcaaaact gcgcaccatc gtcggcgacg atctgctcca ggagaatttt ccgctcattc
     1021 acgcggtcgg ccgcgctgcc gtgcgcccac cccgcctcat cgatctcacc tggggcgacg
     1081 ctagccatcc caaggtgacg ctcattggca agggcgtgtg cttcgattcg ggcgggctcg
     1141 acatcaagcc cgagagcggc atgctcaaca tgaagaagga catgggcggc gcggcggcga
     1201 tgctcgcgct ggcgcacatg ctgatgcagc gcgccatcaa gctgcggctg cgcgtgctca
     1261 tcccggcggt cgagaattcg atctcgggcg catcctttcg cccgcgcgac gtctaccgct
     1321 cgcgcaaggg cttgaccgtc gagatcggca acaccgacgc ggagggccgc ctcattctcg
     1381 ccgacgccat cgcgctcgcc gacgaggagc agcccgactt aatcgccgac atggcaacgc
     1441 tgaccggcgc cgcgcgcgtg gcgctgggga ccgagatccc cccgttctac accgacgacg
     1501 aggcgctcgc cgccgcgctt gccgattgcg ccaatagcga aaacgatccg ttgtggcgca
     1561 tgccgctctg gcggccctac gatgcgctgc tcgagtccaa ggtggcggac gtcaacaacg
     1621 tcgcgtccgg caatttcggc ggctcgatca cggcggcgct gttcttgcgc cggttcgtga
     1681 cggcggcgaa ggcgtggctg catttcgacg tctacgcctg gaatcaggcg accaaacccg
     1741 gccggccgga aggcggcgag tgccaagccg cgcgcgcgct ctatgcgctt ttggtatcgc
     1801 gctatggctg aaagccaacg cggcgcggag gaagtctacg aggtcatcga cgcaaccgcc
     1861 ccgttgcggc aagcgccctc ccccgacgcc ccgctcgaca ccgaggcgct caaaggcgag
     1921 cgcgtgatcg tagcggagac ggaggaaggc tgggcgcgcg gcaagctcga ggccgacggc
     1981 tatgtgggtt acctgccggc gagcgcgctc gcccccccag gcccgccgcc gacacacaag
     2041 gtcgctgcgc tgcgcacgct ggtattcccg ggaccttcga tcaagctgcc gcccctcgag
     2101 gggctgccgc tcggagcccg cctcgcggtc gcgcgcaccg agggcgcgtt cacggtcacc
     2161 gccgcgggcg gctacctgcc ggcgcgccat ctcgtggcaa tcgaggagat ggaaaccgat
     2221 ttcgtcgcgg tcgcggagcg cttcctgtgc gcgccctatc tctggggtgg aaagacctcg
     2281 ctcgggctcg actgttccgg cctggtgcag gtcgcgctca ccgcctgcgg catcccctgc
     2341 ccccgcgaca gccacatgca ggagaaggcg ctcggccacg cgcttgcgcc c
//
LOCUS       DATCWM010000645         2267 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_177926, whole genome shotgun sequence.
ACCESSION   DATCWM010000645 DATCWM010000000
VERSION     DATCWM010000645.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2267
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177926"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            17..310
                     /locus_tag="VIQ50_12650"
     CDS             17..310
                     /locus_tag="VIQ50_12650"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEY9361279.1"
                     /translation="MPLSAVRIHAEQNGGVTTVGQSVADAYNRLYYIERAAQVQIYAM
                     WTGQRLKQLPEAVIEKTKNEIGGARFYNGPTPAERHFCALKRILDREEADYAS"
     gene            complement(701..>2267)
                     /locus_tag="VIQ50_12655"
     CDS             complement(701..>2267)
                     /locus_tag="VIQ50_12655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361280.1"
                     /translation="GTLPANEGCVWSFDDGDGHPRQINAACDEEVKARLISSRPTVAS
                     VDIVLPDGTALRLVSEIVVRDLLIAGMGDSIAAGEGNPDRAVDLSDEGFCFKRFGGGD
                     EYFRPGRAGFRGNKSCTSMLDDESRAGDWAQHSARWLSGPCHRSLYSYQMRTALALAV
                     ENTHVAVTFLPLGCTGATINAGFLGNQRARECPSPGTGAPCLGTVRAQIAELTELLAA
                     TRRQQADRNLDLVLLTIGANDIHFSGLIANVMIEAGTERSLLSRAGIIASVENAQTIF
                     DRELPGNFAKARAALKPLVGGNLSRVVYVTYGNPALAGPTTPCPGGRDGFDVHPAFAV
                     DGGRLRQAVEFVSQRFLPGIKALARCEGGKSCSDPSTERMTFVDAHQPAFASHGACAR
                     AADDPAFDRECFSRKGETFESSLTKGAMQPMACGYPASEFRPYAPRARWIRTANDSYF
                     TAMTYPEGLPAVLQPSDIHDAIWGIFAAVYGGAVHPTAEGHAAMADAALPAAREALGF
                     SAPSAPRLPTSGR"
BASE COUNT          425 a          726 c          720 g          396 t
ORIGIN      
        1 atgaaaggtc agcgcgttgc cgctttcggc tgtccgcatc cacgccgaac aaaacggtgg
       61 cgttaccacg gtaggtcaat cggtagccga cgcctataat cggctctact acatcgagcg
      121 cgcagcgcag gtgcaaattt acgctatgtg gactggtcaa cgtctgaagc agctgcctga
      181 ggccgtaata gagaagacga agaacgaaat cggcggcgcc cgtttctaca acggaccgac
      241 tccggcggaa cggcactttt gcgctctcaa gcgcattctc gatcgtgagg aagccgatta
      301 cgcttcctag gctggttcgc gccggacgta cacaccggcg gctccttatg tcgccatcgc
      361 aattgcagcg acaatgacca gcccgatgag gacagcagcg gccacgaggt acaaatacga
      421 gccctcgaag cgcttagtgc ttgctgccac gactgccgct acggccaaaa ggcaccaagt
      481 gacaacaagt gcgataaaag ctttcaatgt caacatcagc gtccggcctt gaactgcccg
      541 aaaaagatta gagtgtagcc tggcacaatt cgccactgcc gggcctactc ttttcccggt
      601 agggcacgac cgacgcggct gttgatccgg cgtgacggtt tgaactggcc gcggtcagca
      661 aacttgcagc aatcggcctt gatacggcgc ctcgaacgct ctatcgcccg gatgtgggca
      721 gccgtggtgc gctcggcgcc gaaaaaccga gcgcttcgcg tgcggccggc agcgccgcat
      781 ccgccatggc ggcgtggcct tcggcggtcg ggtgcaccgc gccgccatag acggccgcga
      841 atatccccca gatcgcgtca tggatgtcgc ttggctgcag cacggcaggc agcccctcgg
      901 gataggtcat cgcggtgaag tagctgtcgt ttgcggtgcg gatccaccgc gcgcgcgggg
      961 cgtagggacg aaattcactc gccgggtaac cgcaagccat cggctgcatc gcgcccttcg
     1021 tgagactgct ctcaaaggtc tcgcctttgc gcgaaaagca ttcccgatcg aaagcgggat
     1081 cgtccgcggc gcgtgcgcaa gcgccgtggg aggcaaatgc cggctggtgc gcgtccacaa
     1141 aggtcatgcg ctcggtcgaa ggatcgctgc agctcttgcc gccttcgcag cgcgcgagcg
     1201 ccttaatccc gggcagaaat ctctgcgaca cgaattcgac cgcttgacga agtcgcccgc
     1261 catccaccgc gaaggcggga tgcacgtcga agccgtctcg tccacccggg cacggcgtgg
     1321 tgggaccggc gagcgccggg ttgccatagg tgacgtagac gacgcgcgac agatttccgc
     1381 ccacgagcgg cttgagcgcc gcgcgcgcct tggcgaaatt ccccggcagc tcgcggtcga
     1441 agatggtctg tgcgttttcg accgacgcaa taatgcccgc gcgactgagc aggctgcgtt
     1501 ccgttcccgc ctcgatcatc acgttggcga tgaggccaga gaagtgaatg tcgttggctc
     1561 cgatcgtgag cagcaccaga tcgagattgc ggtcggcctg ctgccggcgc gtcgccgcca
     1621 agagctcggt caattcggcg atctgggcgc gaactgttcc caagcagggc gcgcccgtgc
     1681 cggggctcgg acactcgcgc gcccgttggt tgccgaggaa tcccgcattg atggtggcgc
     1741 cggtgcaacc gagcggcagg aacgtcacgg cgacatgcgt attctcgacc gccagcgcga
     1801 gcgcggtgcg catctgatag ctgtagagcg agcgatggca gggaccgctg agccaacgcg
     1861 cgctgtgctg cgcccaatcg ccggcgcggc tctcgtcgtc cagcatcgaa gtgcaggatt
     1921 tgttgcccct gaatcccgct cgtcccggcc ggaaatattc gtcaccgccc ccgaagcgct
     1981 tgaagcaaaa gccctcatcc gacaagtcca cggcacggtc ggggttgcct tcgccggcgg
     2041 cgatcgagtc tcccatgccg gcgatgagca gatcgcgcac tacgatctcg ctgaccagcc
     2101 gcagcgcggt gccgtcgggc agaacgatat cgacgctggc gaccgtcggc cggctgctga
     2161 tgaggcgagc ctttacctcc tcgtcgcagg cggcattgat ttgccgcggg tgaccgtcgc
     2221 cgtcatcgaa gctccacacg cagccttcat tggccggcaa ggttccg
//
LOCUS       DATCWM010000646         2746 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_382579, whole genome shotgun sequence.
ACCESSION   DATCWM010000646 DATCWM010000000
VERSION     DATCWM010000646.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2746
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_382579"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..789
                     /locus_tag="VIQ50_12660"
     CDS             <1..789
                     /locus_tag="VIQ50_12660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY9361281.1"
                     /translation="RVRDHPQATSLVRSGTTVVFENVDFCYPDRRRVFTNFNLRIEPG
                     QRVGLVGQSGCGKSTLFVLLQRFYDVQGGRILLGGQDIARVTQESLRAAIAVVPQDIS
                     LFHRSIMENIRYGRPDASDADVHAAIVAANCDAFIKNLPEGVATIVGDRGVKLSPGQR
                     QRIGIARAFLKDAPILLLDEATSALDSESEEAVREALDRLMGGRTVIAIAHRLSSLRN
                     FDRIVVLQAGKVCEDGPPRVLVQSKGVYGNLVRREVARLAKQAA"
     gene            1304..1675
                     /gene="rpsL"
                     /locus_tag="VIQ50_12665"
     CDS             1304..1675
                     /gene="rpsL"
                     /locus_tag="VIQ50_12665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HEY9361282.1"
                     /translation="MPTINQLIRKPRVTQHAKKKVPALQQSPQKRGVCTRVYTVTPKK
                     PNSALRKVAKVRLTNGFEVIGYIPGEGHNLQEHSVVMIRGGRVKDLPGVRYHILRGVL
                     DTQGVKNRKQRRSKYGAKRPK"
     gene            1783..2253
                     /gene="rpsG"
                     /locus_tag="VIQ50_12670"
     CDS             1783..2253
                     /gene="rpsG"
                     /locus_tag="VIQ50_12670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006199385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HEY9361283.1"
                     /translation="MSRRHSAEKREINPDPKYGNLVVSKLMNVIMRAGKKSVAEGIVY
                     GALEIIETKTKQNPVAIFEQALDNVMPSIEVRSRRVGGATYQVPVEVRTTRRQALGIR
                     WIIAAARERNEKTMTERLSAELLDASNSRGNAVKKREDTHRMAEANRAFSHYRW"
     gene            2286..>2746
                     /locus_tag="VIQ50_12675"
     CDS             2286..>2746
                     /locus_tag="VIQ50_12675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012171081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEY9361284.1"
                     /translation="MPRSHPIEDYRNFGIMAHIDAGKTTTTERILYYTGKSHKMGEVH
                     EGAATMDWMEQEQERGITITSAATTAFWKNKRLNIIDTPGHVDFTIEVERSLRVLDGA
                     VCVLDSNQGVEPQTETVWRQGDKYKVPRIVFCNKMDKIGADFFQCLKDIVDR"
BASE COUNT          558 a          858 c          891 g          439 t
ORIGIN      
        1 cgcgtgcgcg atcacccgca ggcgacctcg ctggtgcgct cgggcacgac cgtcgtattc
       61 gagaacgtcg acttttgtta tcccgaccgg cgcagggtgt tcaccaattt caacctgcgg
      121 atcgagcccg gccagcgtgt cggtctcgtc ggccaatcgg gctgcggcaa atcgaccttg
      181 ttcgtcctgc tgcagcgttt ctacgacgtg cagggcgggc gcattctgct cggcggccaa
      241 gacattgcgc gggtcaccca ggagagcctg cgcgccgcca tcgccgtggt tccgcaggac
      301 atatccttgt ttcaccgctc gatcatggag aacatccgct atggtcggcc ggacgcctcg
      361 gatgccgacg ttcatgcggc gatcgtcgcg gccaattgcg acgccttcat caaaaatctg
      421 ccggagggcg ttgcaacgat tgtcggcgac cgcggcgtga agctgtcgcc cgggcagcgc
      481 cagcgcatcg ggattgcccg cgcgttcctc aaggatgcgc caattcttct gctcgatgag
      541 gcgacctcgg cgcttgacag cgagtcggag gaggccgtgc gcgaggcctt ggaccgcttg
      601 atgggcggcc gcaccgtcat tgccatcgcg caccgactct cgagcctgcg caacttcgat
      661 cggatcgtcg tgctgcaagc gggcaaggtc tgcgaagacg gcccgccgcg ggtgctggtg
      721 caaagcaaag gcgtctatgg caacttggtg cggcgggagg tggcgcggct ggcgaaacag
      781 gctgcctagc gcgcccgcag cgcggcgggt ctcgcgagct cgcatcgccc gagaccagcg
      841 catcagcacg cggctcacga attcgcgcgg tgcggcgccc gcgcacgacg gtgagccaac
      901 gcgcgcacgc cggaacgctg aaagcctcga tgtttcgggc ttttgcgcct tgacttcgcc
      961 ccagcccgtc gatacatacc gcccactttt cggcaggcgg tgagcttcgc ttgctcggaa
     1021 cggcgtgccc cgagacccgc taaacccttg agatctttga ggtctctttc ggctgcggat
     1081 gggggcgtca ccagcctcga ggaatgaagc tcagacgctg cctctgacga ctgtcagatg
     1141 agaagtgcac gaccgcttcg cgcgcgcggt gcggtcctct gtgaaacggg tgagcgccga
     1201 acgcgccggg agcgcaaggc gctcttccgt tttgcgcgtt ggaatgaacc catcatccgc
     1261 tcccttcgag gggacggaga gaccaaggat tgcaagcgag acgatgccga cgatcaatca
     1321 gctgatccgc aagccgcgcg tgacgcagca tgcgaagaag aaggtgccgg cgctgcagca
     1381 gagcccgcag aagcgcgggg tgtgcacccg cgtctatacg gtgacaccga aaaagccgaa
     1441 ctcggcgttg cgcaaggtcg ccaaggtgcg gctgaccaac ggcttcgagg tgatcggcta
     1501 tatcccgggc gagggccata atctgcagga gcactcggtg gtgatgatcc gcggcggccg
     1561 cgtcaaagat ctgcccggcg ttcgctacca catcctgcgc ggtgtgctcg atacccaggg
     1621 cgtcaagaac cgtaagcaga ggcgctccaa atacggtgca aagaggccga agtaattcgg
     1681 cctctttgca cagatccccg ggcgagcgaa gcgagacccg gggaacttga gaggcagacc
     1741 gcggccagca agagataaag agaagagacc aaggacgatc cgatgtcccg ccgtcacagc
     1801 gccgagaagc gcgaaatcaa cccggacccg aaatacggga atctggtggt gtcgaaatta
     1861 atgaacgtga tcatgcgcgc cggcaagaag tcggtggcgg aaggcatcgt ctatggcgcg
     1921 ctcgaaatca tcgagaccaa gaccaagcag aatccggtcg cgattttcga gcaggcgctc
     1981 gacaacgtga tgccgtcgat cgaagtgcgc tcgcggcgcg tcggcggggc gacctatcag
     2041 gtgccggtcg aggtccgcac cacccgccgg caggcgctcg ggatccgctg gatcatcgca
     2101 gccgcgcgcg agcgcaatga aaagacgatg acggagcggc tctcggccga gctgctcgat
     2161 gcatccaaca gccggggaaa cgccgtcaag aagcgcgagg atacgcaccg catggccgag
     2221 gccaaccggg cgttttcgca ttatcgctgg tgatggccgc acagagacca aggacttagc
     2281 cgctcatgcc ccgcagccat cccatcgagg actaccgcaa tttcggcatc atggcccaca
     2341 tcgatgctgg aaagacgacg accaccgagc gcatcctcta ttacaccggc aagagccaca
     2401 agatgggcga ggtgcatgaa ggcgccgcga ccatggactg gatggagcag gagcaggaac
     2461 gcggcatcac catcacctcg gccgcaacca ccgccttctg gaagaacaag cggctcaaca
     2521 tcatcgacac gcccggccac gtcgatttca ccatcgaggt ggaacgcagc ctgcgcgtgc
     2581 tcgacggggc ggtgtgcgtg ctcgacagca atcagggcgt cgaaccgcaa accgagacgg
     2641 tctggcggca gggcgacaag tacaaggtcc cgcgcatcgt cttctgcaac aagatggaca
     2701 agatcggcgc ggacttcttc caatgcctca aggacatcgt ggaccg
//
LOCUS       DATCWM010000647         4974 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_204704, whole genome shotgun sequence.
ACCESSION   DATCWM010000647 DATCWM010000000
VERSION     DATCWM010000647.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4974)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4974)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4974
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204704"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1276
                     /gene="pyk"
                     /locus_tag="VIQ50_12680"
     CDS             <1..1276
                     /gene="pyk"
                     /locus_tag="VIQ50_12680"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013504059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HEY9361285.1"
                     /translation="ATIRDVETEHGRPIGILLDLQGPKLRVGSFADNPAMLMKGDTFA
                     LDADPAPGDATRVHLPHPEIFAVVEPGDTLLLDDGKVRLVALETNSERILTRVEVGGK
                     LSDRKGISLPDTTIPFSALTPKDRSDLEAGLDAGVDWVALSFIQRPEDIAEAKKITRG
                     RASVMAKIEKPQAIHRLGEILDLADALMVARGDLGVEMPVEKVPGLQKQMTRDARRAG
                     KPVVIATQMLESMISCPVPTRAEVSDVSTAIFDGADAIMLSAESASGQYPVEAVATMN
                     RTAEEVERDPIYQTMIHAQHTEPEATGADAIAAAARQIAETLELSAVVCWTSSGSTAL
                     RVARERPSSPIVAISPRVATGRRLSLIWGVHCIVAEDAHDLDDMVERACRLACLDGLA
                     NVGQRVIIVAGVPLGTPGATNMLRIAFVAEAE"
     gene            complement(1289..1912)
                     /locus_tag="VIQ50_12685"
     CDS             complement(1289..1912)
                     /locus_tag="VIQ50_12685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY9361286.1"
                     /translation="MKRRFLSLAAAMIAAAWALPALAEAIDPEPLKPVEPQGALPRAQ
                     LGDKTQNLERLFAALKVAPDDESAKYIENRIWAIWLGSSSDTANLLMGRAKTAADSKD
                     LDLAIRLLNAIIDIRPDFTEAWNRRATVYYTKKDFTHALADIHEVLAREPRHFGALSG
                     LGIILQEMGDDKRALDAFRRALAIHPHLERVPELVKQLSEKIAGRDI"
     gene            complement(2013..2138)
                     /gene="ykgO"
                     /locus_tag="VIQ50_12690"
     CDS             complement(2013..2138)
                     /gene="ykgO"
                     /locus_tag="VIQ50_12690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012177066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HEY9361287.1"
                     /translation="MKVRNSLKSLRSRHRGNRLVRRKGRVYVINKVQRRFKARQG"
     gene            complement(2275..3261)
                     /locus_tag="VIQ50_12695"
     CDS             complement(2275..3261)
                     /locus_tag="VIQ50_12695"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9361288.1"
                     /translation="MIIDWHSHIYTPEEAADDRGVADGKSGPKWGERGCPMVLENFLD
                     AHYKNGIDISVVTNAAHYLRGKAEHEELPSVQRWSDYAAEVQQKYAGTLYCFATILPC
                     GGPAFIKEAERAIRELGLKGIFIHSSHKGHYPDDDEARPFWELVQDLDVPVMIHPPHL
                     GFGEERMKEYRLASSIGRPFDLCLALARLIVRGILEDFPRATIVASHGGGGICETISR
                     MDYAYELQEEAFFLGSYAPMKIKHPPSHYLKRMYLDTVTYNLPAVKMVLDWIGPGRVV
                     YGSDAPPLTSLKPRAIKLINDLDLPEADREAIFFANAARLLKLPSARAAHAA"
     gene            3490..4176
                     /locus_tag="VIQ50_12700"
     CDS             3490..4176
                     /locus_tag="VIQ50_12700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006615001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lectin"
                     /protein_id="HEY9361289.1"
                     /translation="MSGIKSFVIASAAVVSLGSSASHAQQQPPQSPNMTFFVTSNGPG
                     KGADLGGLEGADRHCQTLAQAAGAGGKTWRAYLSTQAADGAQAVNARDRIGSGPWQNF
                     KGEAVAQSVDELHGDNNKLGMPISLTERGTMVAGVGYTPNYHDVLTGSQPDGRAFAAG
                     EDRTCRNWTSSTQGAAMVGHIDRKGLRDDAASKSWNSSHPSRGSDGGCSQNDLRGTGG
                     NGLFYCFAAN"
     gene            complement(4318..4653)
                     /locus_tag="VIQ50_12705"
     CDS             complement(4318..4653)
                     /locus_tag="VIQ50_12705"
                     /inference="COORDINATES: protein motif:HMM:NF012417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY9361290.1"
                     /translation="MKAVTDASGLYEVERRAYHAARPGFRIAELQISPKQKVPWHYHN
                     NVHDTFYVVSGAIRIFLQQPKEEVRLTPGQTYAVPPKRPHLVTNAGDTSAVFLVLQGI
                     GEYDFVPLT"
     gene            complement(4669..>4974)
                     /locus_tag="VIQ50_12710"
     CDS             complement(4669..>4974)
                     /locus_tag="VIQ50_12710"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9361291.1"
                     /translation="TSGERAPEFPDVPTLAEAGAPGQESLYFQGVVAPAGTPKEIVDR
                     LYRAIDKILARPEVKERLAAIGFGVTVRSPEDFGTQIKAETARWAKVIRDANIKRIE"
BASE COUNT          879 a         1604 c         1606 g          885 t
ORIGIN      
        1 ggcgacgatc cgcgacgtgg agaccgagca cggccgaccg atcgggattc tgctcgatct
       61 acagggcccc aaactcaggg tcggcagctt cgcggacaat ccggccatgc tgatgaaggg
      121 cgacactttc gcactcgacg ccgatcccgc cccgggcgac gccacgcggg tgcacctgcc
      181 gcatccggag atctttgccg tggtggagcc cggcgacacg ctcctgctcg atgacggcaa
      241 ggtccggctg gtcgcgctcg agacaaacag cgagcgcatt ctcacgcgcg tggaggtcgg
      301 cggcaagctc agcgaccgca agggcataag cctgcccgac acgacgatcc cgttctcggc
      361 gcttacgcca aaggatcgtt ccgatctcga agcgggcctc gacgccggtg tcgattgggt
      421 ggcgctctcc ttcatccagc gccccgaaga tatcgccgag gcgaagaaga tcacgcgcgg
      481 acgcgcctcc gtcatggcca agatcgagaa gccgcaggcg atccaccggc tcggcgagat
      541 cctggacctc gccgatgcat tgatggtggc gcgcggcgat ctcggcgtcg agatgccggt
      601 cgagaaggtg cccgggctgc aaaagcaaat gacgcgcgac gcccgccgtg ccggcaagcc
      661 ggtcgtgatc gcgacgcaga tgctggaatc gatgatctcc tgtcccgtgc ctacccgagc
      721 cgaggtctcc gacgtttcga cggccatttt cgacggcgcg gacgccatca tgctgtcggc
      781 ggaatcggca tccgggcagt acccggtcga ggcggtggcg accatgaacc ggaccgcgga
      841 ggaagtggaa cgcgatccga tatatcagac catgattcat gcgcagcaca cggagcctga
      901 ggcgaccggc gccgacgcta tcgccgcggc agcgcgccag atcgccgaga cgctcgagct
      961 ttccgccgtc gtttgctgga caagctcggg ctccaccgca ctgcgcgtcg cgcgcgaacg
     1021 cccgagctcg cccatcgtgg cgatttcccc cagggtcgcg accggccggc gcctgtcgct
     1081 gatttggggg gtgcactgta tcgttgcgga ggacgcccac gatctcgacg acatggtgga
     1141 gcgcgcctgc cgactcgcct gcctcgatgg gctcgccaat gtcggccagc gcgtgatcat
     1201 cgtcgccggc gtcccactcg gtacgccggg cgcgaccaat atgttgcgca tcgctttcgt
     1261 ggcggaggcg gagtaagaga ccgcgcggtc agatatcgcg gccggcgatc ttttcgctca
     1321 gttgcttgac cagctcgggc acgcgttcca ggtggggatg gatcgcgagg gcgcgccgga
     1381 acgcatcaag ggcgcgcttg tcgtcaccca tctcctgcag gatgatgccc agccccgaga
     1441 gcgcgccgaa atggcgcggc tcgcgcgcca gcacttcatg aatatcggcg agcgcgtggg
     1501 tgaaatcttt cttcgtgtag tagaccgtcg cgcggcggtt ccatgcctcg gtgaaatccg
     1561 gccgaatgtc gatgatggca ttgagcagcc tgattgccag atcaaggtcc ttgctgtcgg
     1621 ccgcggtctt ggcgcgtccc atcaacagat tggcggtgtc gctgctggag ccgagccaaa
     1681 tcgcccagat gcggttttca atgtatttcg cgctttcgtc gtcgggcgcg actttgagcg
     1741 ccgcgaacag ccgctcgaga ttttgcgtct tgtcgccgag ttgagcgcgc ggcagcgcgc
     1801 cctgaggctc gaccggcttg agcggctcgg gatcgatagc ttccgcgagt gccggcagcg
     1861 cccacgccgc cgcaatcatc gccgccgcaa gtgagaggaa tcgccgcttc atgcgcggag
     1921 attaacgctg cgccgcgggg cgataaagac aagatttcgt cagaacagcc gcgcaaaggc
     1981 cgcaagcgtc cccggccaaa gcgggcgggc gctcagcctt ggcgcgcctt gaaccggcgc
     2041 tggaccttgt tgatgacata gacccggccc ttgcgacgga ccaggcgatt gccgcgatga
     2101 cggctgcgaa gagacttcag ggagttacgt actttcattg ctctggctct tgggcgcggc
     2161 ttggcgcacg gtgtttctat aaactcgcgc gcaaagtagg gatgcaacgg cggctcgtca
     2221 accggtgcgc ccgaggcgag acccgacctc cctgccaatt gctcgctcgg cgcctcaggc
     2281 ggcgtgcgcc gcccgcgcgg acggcagctt caagagcctc gccgcattgg cgaagaagat
     2341 cgcctcgcgg tccgcctcgg gcaggtcgag gtcgttgatc agcttgatcg cgcgcggctt
     2401 gagcgaggtg agcggcggcg cgtcgctgcc gtagacgacg cgcccggggc cgatccagtc
     2461 gagcaccatt ttcaccgccg gcagattgta ggtgacggtg tcgagataca tccgcttgag
     2521 atagtggctc ggcggatgct tgatcttcat cggcgcgtaa gagccgagga agaacgcctc
     2581 ctcctgcaac tcgtaggcat aatccatccg gctgatggtc tcgcagatgc cgccgccgcc
     2641 gtgcgaggcg acgatcgtcg cccgcggaaa atcctccagg atgccgcgca cgatcagccg
     2701 cgcgagcgcc aggcagagat cgaacggccg gccgatgctg gaggcgagac gatactcttt
     2761 catccgctcc tcgccgaagc cgagatgcgg cggatggatc atcaccggca cgtcgaggtc
     2821 ctgcaccaac tcccagaacg ggcgcgcttc gtcatcgtcc ggatagtggc ctttgtggct
     2881 ggagtggatg aagatgccct tgagcccgag ctcgcggatg gcgcgctcgg cctccttgat
     2941 gaaggccgga ccgccgcacg gaaggatcgt ggcgaagcag tagagcgtgc ccgcgtattt
     3001 ctgctgaacc tcggcggcgt aatcgctcca cctctgcacc gacggcagtt cttcgtgttc
     3061 ggccttgccg cgcaggtaat gcgcggcatt ggttacgacg ctgatatcga tgccgttctt
     3121 gtagtgagcg tcgaggaaat tctcgagcac catggggcag ccgcgttcgc cccatttcgg
     3181 cccgctcttc ccatcggcga cgccgcggtc gtccgctgcc tcttccggag tatagatgtg
     3241 tgaatgccaa tcaatgatca cgctgatctc tccgtcacag aaatcataac gggtgagcac
     3301 cgcgcatcgg gctcgcgctt tcaatcgcgg cgatcgccaa tgtgcgggca aaggcgcagc
     3361 cggtcaatct gacatgccat tattcccggg ggcgcaaaat aatttcatgc aggttggcgt
     3421 gattgcgttt catgctagat ttctactgca gcgctacaag cgcgtcgtca gttcaaacgg
     3481 gagcacaaga tgtccgggat caagtcgttc gtaatagcgt cagctgccgt agtgtcattg
     3541 ggctcgagcg cgagtcacgc gcagcagcag ccgccccaat ctcccaacat gacgtttttc
     3601 gtgacgagca atgggcccgg caagggcgcg gaccttggcg gcctggaagg cgcggatcgc
     3661 cactgccaaa ccctcgcgca ggccgccggc gccggcggca agacctggcg cgcttatctc
     3721 agcacgcaag cagcggatgg cgcacaagcc gtcaacgccc gcgaccgcat cggatcgggg
     3781 ccatggcaga atttcaaagg cgaagccgtc gctcaaagcg tcgacgaact ccacggcgac
     3841 aacaacaagc tcggcatgcc gatctcgctg accgagcgcg gcaccatggt tgccggcgtc
     3901 ggctacacgc ccaattacca cgacgtgctg acaggctcgc agcctgacgg gcgagcattt
     3961 gcggccggag aggacagaac ctgccgcaat tggacgagca gcacccaagg tgccgcgatg
     4021 gtcggccaca tcgaccgcaa gggattgcgc gacgacgcgg cctccaagtc gtggaactct
     4081 tcgcatccgt cgcgcggttc cgacggtggg tgcagccaga acgacctcag gggcaccgga
     4141 ggcaacggcc tgttctactg cttcgccgcg aattaactga agtgcctcga cggggccggt
     4201 tgcgccctac gtcctgcgca gagcgggcgt ccccagttca cgacgcccgc tcacgcgtct
     4261 ctccattctg aaaacgacag cgctctctgt cgaacctgcc cggacgcgtc cgagggttca
     4321 cgtcaggggg acgaaatcgt attcgccaat gccttgcagc acgagaaaca cagcggacgt
     4381 gtcgccggca ttggtcacga ggtgcgggcg cttcggcggc acggcatagg tttgccccgg
     4441 cgtcagccgc acctcttcct tcggctgctg gaggaagatg cgaatggctc cgctcacgac
     4501 gtagaaggtg tcatgcacgt tgttgtggta atgccagggc accttttgct tcgggctgat
     4561 ctggagctcg gcaatgcgaa agcccggacg cgccgcgtga taggcgcggc gctccacctc
     4621 gtatagtccg ctcgcatccg tgactgcctt catggcgcct gctccgcatc actcgattcg
     4681 tttgatattg gcatcgcgaa tgacctttgc ccaccttgcc gtttcggcct tgatctgggt
     4741 cccgaagtcc tcgggcgaac gcacggtcac gccgaaaccg atcgcggcga ggcgttcctt
     4801 cacctccggc cgcgccagga ttttgtcgat cgcgcgatag agccggtcca cgatttcctt
     4861 cggcgttccg gccggcgcga cgacgccctg gaagtagagc gattcctgcc ccggcgcgcc
     4921 cgcctccgcc aaggtcggca catctgggaa ttccggtgcg cgctcgccgc tcgt
//
LOCUS       DATCWM010000648         2949 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_139677, whole genome shotgun sequence.
ACCESSION   DATCWM010000648 DATCWM010000000
VERSION     DATCWM010000648.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2949)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2949)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2949
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139677"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1959)
                     /gene="ppdK"
                     /locus_tag="VIQ50_12715"
     CDS             complement(<1..1959)
                     /gene="ppdK"
                     /locus_tag="VIQ50_12715"
                     /EC_number="2.7.9.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050242 - pyruvate, phosphate dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0015976 - carbon utilization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, phosphate dikinase"
                     /protein_id="HEY9361292.1"
                     /translation="MVRSTSRRTRVKRKSGRPASGRDRTARSGAPTSKTSARERKWVY
                     RFGNGKAEGRADMRNLLGGKGAGLAEMASLGLPVPPGFTITTEVCTYYYENGKTYPKG
                     LRQQVEAALADVGRITGKTFGDSANPLLVSVRSGARASMPGMMDTVLNLGLNDATVEA
                     LAKKSGDQRFAYDSYRRFISMYSDVVLGFGHHHFEEILDEYKDKRGYTLDTDLSADDW
                     VELVGRYQQRLQEEQGEPFPQEPEQQLWGAVGAVFGSWMNQRAITYRRLHRIPESWGT
                     AVNVQSMVFGNMGETSATGVAFTRNPSTGDKRLYGEFLINAQGEDVVAGIRTPQEITE
                     AARAEARSDKPSMERAMPQAFKELGRIYGVLERHYRDMQDLEFTVEQGKLWMLQTRAG
                     KRTAKAALKIAVDLANEGLISRKEAISRIEPAALDQLLHPTIDPKAERKVIATGLPAS
                     PGAASGEIVFSSDEAEALKAKDKRVILVRVETSPEDIHGMHAAEGILTTRGGMTSHAA
                     VVARGMGKPCVSGAGVLRVDYAAGSMSIAGQTFKAGDVITIDGSTGEVLAGLVPMTEP
                     ELSGEFATLMGWADAVRKLGVRANADTPNDARVALRFGAEGIGLCRTEHMFFDEARIR
                     AMREMILADDETSRRAALAKLLPMQREDF"
     gene            complement(2043..2198)
                     /locus_tag="VIQ50_12720"
     CDS             complement(2043..2198)
                     /locus_tag="VIQ50_12720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012454889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3096 domain-containing protein"
                     /protein_id="HEY9361293.1"
                     /translation="MTITFAHITPVVALIAGVLILLVPRLLNYVVAIYLIIVGIVGLN
                     SIHHFIR"
     gene            complement(2309..>2949)
                     /locus_tag="VIQ50_12725"
     CDS             complement(2309..>2949)
                     /locus_tag="VIQ50_12725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DALR anticodon-binding domain-containing
                     protein"
                     /protein_id="HEY9361294.1"
                     /translation="FERFNLSIDATAAAFELLAFINDRLKVQLREQGARYDLVDAVIN
                     VGQIVYHGPTDQLDSETADPELFRTYSNDVLLLIVRRVEALGQFLDTEDGMNLLAGYK
                     RATNIIRIEEKRDKREYVGRPDPSLYRQSEERALASAIEVAKAESSAAVTREDYEAAM
                     HAMAKLRPHVDRFFDKVTVNVEDKQLRENRLKLLNEIREATRTVADFSRIEG"
BASE COUNT          512 a          932 c          942 g          563 t
ORIGIN      
        1 gaaatcctcg cgctgcatcg gcaagagctt cgcgagcgcg gcgcggcgcg acgtctcgtc
       61 gtcggcgagg atcatctcgc gcatggcgcg gatgcgagcc tcgtcgaaga acatatgctc
      121 ggtgcggcac agcccgatgc cctcggcgcc gaaccgcaac gcgacccgag catcgttcgg
      181 cgtgtccgca ttggcgcgca cgccgagctt gcgcaccgcg tcggcccagc ccatgagggt
      241 cgcgaactcg ccggagagct ccggctcggt catcggcacg aggccggcga gcacctctcc
      301 ggtcgagccg tcgatggtga tgacgtcacc cgctttgaag gtctgtccgg caatgctcat
      361 gctgccggcc gcgtaatcga cacgcagcac gccggcgccg gaaacgcagg gcttgcccat
      421 gccgcgcgcc accacagcgg cgtgcgacgt cattccgccg cgcgtggtga gaatgccctc
      481 ggccgcgtgc atgccgtgga tatcttccgg cgaagtctcg actcgcacga ggatgacgcg
      541 cttgtccttg gctttgagtg cctcagcctc gtcggacgag aacactatct cgccggatgc
      601 ggcgccgggc gaggcgggaa gcccggtggc gatgaccttg cgctcggcct tgggatcgat
      661 ggtgggatgc agcagctggt cgagcgccgc cggctcgatg cgcgaaatcg cctctttgcg
      721 tgaaatcaat ccctcgttcg ccagatccac cgcgattttc agcgccgcct tggccgtgcg
      781 cttgccggcg cgcgtctgaa gcatccatag cttgccctgc tcgacggtga attcgagatc
      841 ctgcatatcg cgataatggc gctcgagtac gccgtagatg cgcccgagct ccttgaacgc
      901 ttggggcatc gcgcgttcca tcgacggctt gtccgagcgc gcctccgccc gcgccgcttc
      961 cgtgatctcc tgcggggtgc ggatgccggc aaccacgtcc tcgccctggg cattgatcag
     1021 gaactcgccg tagagccgct tgtcgccggt cgagggattg cgcgtgaacg ccactccggt
     1081 ggccgaggtc tcgcccatat tgccgaatac catcgattgg acgttgaccg cggtgcccca
     1141 actctccggg atgcggtgca gacgccgata ggtgatggcg cgctgattca tccaggagcc
     1201 gaatacggcg ccgacagcgc cccacaactg ctgttccggc tcctgcggga acggctcgcc
     1261 ctgctcttct tggagtcgct gctgatagcg gccgacaagc tcgacccagt cgtcggcgga
     1321 cagatcggtg tcgagcgtat agccgcgctt gtccttgtac tcgtcgagga tttcctcgaa
     1381 gtggtgatgg ccgaagccga gcaccacatc ggaatacatg ctgataaagc ggcggtacga
     1441 atcataggcg aagcgctggt cgccggactt cttcgccagc gcctcgacgg tcgcgtcgtt
     1501 gaggccgaga ttgaggaccg tatccatcat gcccggcatc gacgcgcggg caccggagcg
     1561 caccgagacc agcagaggat tggcgctgtc gccaaaggtc ttgccggtga tgcggcccac
     1621 gtcggcgagc gccgcctcca cttgttgacg caggcccttg gggtaggtct tgccgttctc
     1681 gtaatagtag gtgcagacct cggtggtgat ggtgaagccc ggcggaacgg gcaagccgag
     1741 acttgccatc tcggcaaggc cggcgccttt gccgccgagg aggttgcgca tatcggcacg
     1801 gccctctgcc ttgccgttgc cgaacctgta gacccatttg cgttcccgtg ccgacgtctt
     1861 ggacgtgggc gccccgctgc gcgccgtgcg gtcgcggccg gatgccgggc gcccggactt
     1921 tctcttcact cgagtacgac gcgacgtcga tctcaccatg gaaccacgac tgaatgcgcc
     1981 agccgttgat gatcaccgcc gcgggcgccg gcgcaagggc gcatggcgcg gcggccgcgc
     2041 tatcagcgaa tgaagtgatg gatactattg agcccgacga tgccgacgat gatcaagtag
     2101 attgccacca cgtaattcaa cagtcgcggc acgagcagga tcagcacgcc ggcaatgagg
     2161 gcaaccaccg gcgtgatgtg ggcaaaggta atggtcattg ggatctcctg aggtggcagt
     2221 cgatgttaag acgacgtcgg cggcgggttc cacgtgcgaa gctcattcta ctcggtgtca
     2281 tcatcggcgt aagtggcggc gggcctcctc aaccctcgat gcgcgagaaa tcggccaccg
     2341 tgcgggtcgc ctcgcggatc tcgttgagca gcttgagccg gttctcccgg agttgcttgt
     2401 cctcgacatt gaccgtgact ttatcgaaga atctatcgac gtgcgggcga agcttcgcca
     2461 tggcgtgcat ggcggcttcg tagtcctccc gggtgaccgc ggcggaggac tccgccttgg
     2521 cgacctcgat cgcgctcgcc agggcacgct cctcgctctg acggtaaagc gagggatccg
     2581 gccgcccgac atattcgcgc ttatcgcgct tctcctcgat gcggatgata ttggtcgcgc
     2641 gcttgtagcc tgcgagcaga ttcatcccat cttcagtatc gaggaattgt cccaaggcct
     2701 cgacccgtcg cacgatgagg aggagcacat cattagagta agtgcgaaac aactctgggt
     2761 ccgcggtttc tgaatccaac tggtccgttg ggccatgata gacgatttgc ccaacgttga
     2821 tgactgcgtc tacaagatcg tatcgagcgc cctgctctcg caactgcacc ttcaaacgat
     2881 cattgatgaa agcgagcagt tcaaaagcgg ccgccgtcgc atcgatggat aagttgaacc
     2941 gttcgaaat
//
LOCUS       DATCWM010000649         2607 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_355737, whole genome shotgun sequence.
ACCESSION   DATCWM010000649 DATCWM010000000
VERSION     DATCWM010000649.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2607
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_355737"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..475
                     /locus_tag="VIQ50_12730"
     CDS             <1..475
                     /locus_tag="VIQ50_12730"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEY9361295.1"
                     /translation="PNDYLYVYTSRTNPAHWHRLLEVIGRKDLIGDPRFDTAAMRLKH
                     EPDVDAMITAWTRQHDKREAMRVLGGAGVPAGAIFDTMELTEEADFERRGIMQTMEHP
                     IAGPFKMPGWPVRFGGRTPDVKPSPLLGQHTSEVLSEWLGFHADQIDQLGKDKII"
     gene            complement(670..2328)
                     /locus_tag="VIQ50_12735"
     CDS             complement(670..2328)
                     /locus_tag="VIQ50_12735"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEY9361296.1"
                     /translation="MSEVDGATLIARSLKQQGIDHLFGVVGFPVTPIAVAAQKEGVAY
                     IGMRNEQAASYAAQAYGYLTGRPGACIVVTGPGVVHGLSGLANAQQNCWPMILFGGAS
                     ETYRGGMGAFQEERQVLIASPFCKFAHGIESVQRIPYYVEMATRNAIYGRPGATYLDV
                     PDDIITGKCDVDKVAQVGRALDPPRMVAPMENIEAALNLLQRAERPLVLIGKGMAWSR
                     AENEVRAFIERTQLPFLRSPMGKGVMPDDHPLSVAAARTLALQNADVVFLMGARFNWI
                     FHFGQPPRYAKDVKVIQLDIAPEEIGHNKATEVALVGDGKAIVGQLNQALADRQWFYP
                     KDTPWRQMITKKADENAAQIRPQIHDDEAPANYFRALRDVAAWMPKNAILSAEGAGTM
                     DIGLTQLPSFSARSCLNAGTYGTMGVGLGHAIAACVVHPDRPVIHLSGDSAIGFSGME
                     METLVRYNFPAKIVVLNNGGIGPGMPAIPESPMFNMKPNALIYGARYDRVMEAFGGKG
                     FFVEDPKDLRGALDEAMSFRGPALVNVVISQGSARKSQQFRWHS"
BASE COUNT          478 a          826 c          824 g          479 t
ORIGIN      
        1 gccgaacgac tacctctatg tctataccag ccgcaccaat ccggcgcatt ggcaccgact
       61 gctcgaagtg atcggacgca aggatttgat cggcgatccg cgcttcgaca ccgcagcgat
      121 gcgccttaag cacgagcccg acgtcgatgc gatgatcacc gcctggacac gccagcacga
      181 caaacgcgag gcgatgcgcg tgctcggcgg cgccggcgtg ccagccgggg ccatcttcga
      241 taccatggag ctgaccgagg aagcggattt cgaacggcgc ggcatcatgc agacgatgga
      301 gcacccgatc gccggcccgt tcaagatgcc gggctggccg gtgcgcttcg gcgggcgcac
      361 gccggacgtc aagccgtcgc cgctgcttgg ccaacacaca agtgaagttt tgagcgaatg
      421 gcttggtttt cacgcagacc agatcgacca actcggcaaa gacaagatca tctagttagg
      481 gtctgtatct cctaaattgc ggccgctcag caatcgctga cggatgttcg cttagcccta
      541 gaagggcgga agagcggaca tgcggggagg cccgaatagc gccaacgcac gaaatcgctg
      601 cgagagcccg gtgcgcgctt gacctaaccg cgagcgcagt taccagagaa gagagcttct
      661 ctcactaaat cagctgtgcc agcgaaactg ctgcgacttg cgggcggagc cctgcgagat
      721 cacgacgtta acgagggcgg ggccgcggaa gctcatcgcc tcgtcaaggg cgccgcgcag
      781 atccttcggg tcttcgacaa agaagccctt gccgccgaag gcctccatca ctctgtcgta
      841 ccgggcgccg taaatcagtg cgttgggctt catgttgaac atcgggcttt ccgggatcgc
      901 cggcatgcca gggccgatgc cgccattgtt caagacgacg atcttggcag ggaagttgta
      961 acggaccagc gtctccatct ccatgcccga aaagccgatc gccgagtcgc ccgaaaggtg
     1021 gatgaccggc cggtcgggat gcacgacgca ggcggcgatg gcgtggccga ggccgacccc
     1081 catcgtcccg taagtgccgg cgttgaggca ggaacgggcg ctgaagctcg gcaattgggt
     1141 gaggccgata tccatcgtgc cggcgccctc ggcgctgagg atcgcgttct ttggcatcca
     1201 ggcggcgacg tcgcgcaagg cccggaaata attggccggc gcctcgtcat catggatctg
     1261 cggccggatc tgcgccgcgt tctcatccgc cttcttcgta atcatctgcc gccacggcgt
     1321 gtccttcgga tagaaccact gacggtcggc gagcgcctgg ttgagctgcc cgacgattgc
     1381 tttgccgtca ccgaccagcg ccacttccgt cgccttgtta tggccgatct cctcgggcgc
     1441 aatgtcgagc tggatgacct tgacatcctt cgcatagcgc ggcggctggc cgaaatgaaa
     1501 gatccagttg aaccgcgctc ccatcaggaa gacgacgtcg gcgttctgga gcgccagcgt
     1561 gcgcgccgcc gccaccgaca acggatggtc gtccggcatc acgcccttgc ccatcggcga
     1621 acgcaggaac ggcagttggg tgcgctcgat gaaggcgcgg acttcgttct cggcgcgcga
     1681 ccaggccatg cccttgccga tgagaacgag cggccgctcg gctcgttgga gcagattcag
     1741 cgccgcctcg atgttctcca tcggcgccac catgcgcggc gggtcgagcg cacgcccgac
     1801 ctgggcgact ttgtcgacgt cgcatttgcc agtgatgatg tcgtcgggca cgtcgagata
     1861 cgtagcgccg ggtcggccat agatcgcgtt ccgcgttgcc atctcgacat aataggggat
     1921 gcgctggacg ctctcgatgc cgtgcgcgaa tttgcagaac ggcgaggcga tcagcacctg
     1981 gcgctcttcc tggaatgcgc ccatgccgcc gcgataggtc tccgaggcgc cgccaaacag
     2041 gatcattggc cagcaatttt gctgggcatt ggcgaggccg gagagcccgt gcaccacgcc
     2101 ggggccggtc acaacgatgc aggcgccggg gcggccggtc agatagccgt aggcctgcgc
     2161 cgcgtaggag gcggcctgct cgttgcgcat gccgatatag gcaacgcctt ccttctgtgc
     2221 ggctacggcg atcggggtga ccggaaaccc aacgaccccg aacaggtgat cgatgccctg
     2281 ctgtttgagg ctcctcgcta tcagggtcgc gccgtcgact tcgctcatgc tttcctcctc
     2341 gtaccccagg cgcgagatta cgcattgatg gcaagcccgc gaaaggggtc tgcgcttggc
     2401 ttaccgttga gcgactcacg gcgtctggcg gttaccggtg aagcaacccg gcacgccctt
     2461 acttaagggc gcttcgtcga gcgcctcaat ttcttatttc gcctaccggc gcttttggca
     2521 gttccgccgc ccagccgttt ccgggtgttg cgcccttggc actgatccat ttctgaacgt
     2581 gaaaccttgg gagatttgcc aaacaca
//
LOCUS       DATCWM010000650         3727 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_496227, whole genome shotgun sequence.
ACCESSION   DATCWM010000650 DATCWM010000000
VERSION     DATCWM010000650.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3727
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_496227"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1088)
                     /locus_tag="VIQ50_12740"
     CDS             complement(<1..1088)
                     /locus_tag="VIQ50_12740"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEY9361297.1"
                     /translation="MRRTVAASILLASLLGIGTAGAAECPADALGVSRTLVVDVNEHP
                     RVGSWQYGESLPLNDHEVVLTFDDGPLPPYTDRVLDLLAAECVKATFFMVGRMVQAYP
                     AAVRRVYNEGHTIANHSQTHPFTFHKMSVDQASREIEGGFSSLRTALGDPKAVAPFFR
                     FPGLLRQTAVEQYLADHGDMTWSVDLAADDWTHINNRDVARRAISRLEARGKGILLLH
                     DIQARTALALPEILQELKARGYKIVHVVPATPDRPKTVTEPELWAARHAPEPKFWPRT
                     LAVGVESPEPALAAPSPASFGVESVGRTIKVAMAQSFDRQPEAPAWPNPADYAVPSEA
                     HLLPIAGGHNFRYMRVFRLGEPEKPKVAA"
     gene            1679..3085
                     /gene="mgtE"
                     /locus_tag="VIQ50_12745"
     CDS             1679..3085
                     /gene="mgtE"
                     /locus_tag="VIQ50_12745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HEY9361298.1"
                     /translation="MLKEKDAGAPAPAVAMRDEDGALRAEFVEHVAQAIGEDDSTALR
                     GLVGDLHAADLGDVIEALEPELRPSLVMLLGRDFDFLALTEVDATIREAILKELGAAA
                     VADGVRELESDDAVAILADLPQDEQTEILEQLPARERVTLARILLYPENSAGRRMQTE
                     FIAVPPTWTVGQTIDHLRETPDEPDRFWELYCVDAADRLQGTVALDRLLRTKRPVPIG
                     ELIDEEMHPVRVSDDQEDVARLFEHYDLVSTPVVDANDRLVGVITFDDIIDVIEEAAE
                     EEIRALGGVGREEELSDPVWYVARGRFNWLLVNLATAFLASSVLGLFEGELQKMVALA
                     ILAPIVASQGGNAATQTMTVAVRALATRELSSLNAARLVLREVLVGLVNGLAFAVITG
                     VAAAAWFKLPDLGLVIGLAMICNLVAGALGGILVPLVLQHFRADPAISSGVFVTTVTD
                     VVGFFSFLGIATLWFGLK"
     gene            3255..3632
                     /locus_tag="VIQ50_12750"
     CDS             3255..3632
                     /locus_tag="VIQ50_12750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY9361299.1"
                     /translation="MMRLRLKADGRIVEILPDGSEQALPSPLAEIAQQMRYGRPAGGW
                     VAAARAARGTAADAVYARGVRARTKLTQAQFAARIGVPIETVRNWEQGKRSPRGPARA
                     LLKVIEAVPDVAFAVLSTNKPPQ"
BASE COUNT          615 a         1140 c         1315 g          657 t
ORIGIN      
        1 gccgcaacct tcggcttctc cggctcgccc aaccggaaca cgcgcatgta tcggaaattg
       61 tgcccgcccg cgatgggcaa gagatgagct tccgacggca cggcataatc ggccgggttc
      121 ggccacgccg gcgcctcggg ctgccggtcg aagctttgcg ccatggcaac ctttatcgtc
      181 cgaccgacag attcgacgcc gaagctcgca gggctgggtg cggcgagcgc cggttcggga
      241 ctctctacgc caacggccaa ggtgcgcggc cagaacttcg gctcgggcgc gtggcgcgcg
      301 gcccacagct ccggctcggt cacggtcttc ggccgatcag gcgtggccgg gaccacgtgc
      361 acgattttgt agccgcgtgc cttgagctcc tggagaatct ccggaagcgc gagcgcggtg
      421 cgggcttgga tgtcgtgcag cagcaatata cctttgccgc gcgcctcgag ccggctgatg
      481 gcgcggcgcg cgacgtcgcg gttgttgatg tgcgtccagt cgtcggcggc gaggtccacg
      541 ctccaggtca tgtcgccgtg gtcagcgagg tattgctcga ccgcggtctg ccgcaacagg
      601 ccggggaagc ggaagaacgg agcgaccgcc ttcgggtcgc cgagcgcggt gcgcaacgag
      661 gaaaagccgc cctcgatttc gcgcgaagcc tggtccaccg acatcttgtg gaaggtgaag
      721 gggtgggtct ggctgtggtt ggcgatcgta tggccctcgt tgtagacgcg ccgcacggcg
      781 gcgggatagg cctgcaccat gcggccgacc atgaagaacg tggccttcac gcattcggcg
      841 gcgagcagat cgaggacgcg atcggtatag ggcggcagcg gaccgtcgtc gaaggtcagc
      901 acgacctcgt ggtcattgag cggcaacgat tccccatact gccagctgcc aacgcgcggg
      961 tgctcgttca cgtcgaccac gagagtgcgg ctgaccccga gcgcgtcggc ggggcattcg
     1021 gcggcgcccg cggtcccgat gccgagcaac gaggcgagca gaatggatgc ggcaacggtg
     1081 cggcgcatgg ccccgctatt actccggttg gaccaatccg gaaaggatgc ccgggcccca
     1141 atggtgagtc tcgcccctca ctctaccgaa acactagggg gaggcaattt aatgacccct
     1201 taatggcggg gattggggac gatttgaggc atccgtgacg ccaacgacac ggtcggggaa
     1261 ctcgccccct gctgtcgtgg aacggcggga tgcctttatc acggcgatcg ctttcccacg
     1321 cgaatggggg tcgccggtag cggtccggcg tcccccattc accctgccga tagccattgg
     1381 caaggtagaa agcggcgagg tcggtgggca tcgatgatga tctcggtttt gccagaacgc
     1441 gcgcagcgtt ttccgcaagc ctgggcgtga cgcggtcgcg gccttgccgc tggagatgat
     1501 gccaccaggt gaaggcctgc tcggccccgc ccaatgagtt cgatgcgcac cacgcccacg
     1561 attttgccgt cgcgcaacag cgagcggcga tcattgcgag tgccgaggtc gttcgcgatt
     1621 gccagcttag gacgctgagc gtagaagccc aacgcgttcc tttgcgccgg gacacgatat
     1681 gctcaaggaa aaagatgcgg gcgcgcctgc gcccgcggtt gcgatgcgcg acgaagatgg
     1741 cgcgttgcgt gcggaatttg tcgagcacgt cgcgcaagcg attggcgagg acgattccac
     1801 ggcgctgcgc ggattggtgg gcgatctgca cgcggccgac ctcggcgatg tgatcgaggc
     1861 gttggagccg gagctgcggc ctagcttggt catgctgctg gggcgcgact tcgatttttt
     1921 ggcgctgacc gaggtcgatg ccaccatccg cgaggcgatt ctcaaagagc tgggcgccgc
     1981 ggcggtggcc gatggcgtgc gcgagctcga gtccgatgac gcggtggcga tcctcgcgga
     2041 tctgccgcag gacgagcaga ccgagattct cgagcagctt cccgcccgcg agcgcgtcac
     2101 gctggcgcgc atcctgctct atcctgaaaa ttccgccggc cggcgaatgc agacggaatt
     2161 catcgccgtg ccgccgacat ggaccgtggg ccagaccatc gatcacttgc gcgaaacccc
     2221 cgatgagccc gatcggtttt gggaactcta ttgtgtcgat gccgcggatc ggctgcaggg
     2281 gacggtggcg ctcgaccggc tgttgcggac caagcggccg gtgccgatcg gcgagctaat
     2341 cgacgaggaa atgcacccgg tccgggtcag cgatgaccag gaggacgtgg cgcgattatt
     2401 cgagcattac gatctcgttt ccacgcccgt ggtcgatgcg aacgatcggc tggtcggcgt
     2461 catcacgttc gatgacatca tcgatgtcat cgaggaggcg gccgaagagg aaatccgggc
     2521 gctcggcggc gtcgggcgcg aagaggagct ttccgatccc gtctggtacg tggcgcgcgg
     2581 acgattcaat tggctgttgg tcaatcttgc caccgcgttt ctggcctcgt ccgtgctcgg
     2641 cttgttcgag ggtgagctgc agaagatggt ggcgttggcg atattggcgc cgattgtggc
     2701 aagccagggc ggaaacgcgg cgacacagac catgaccgtg gcggtacgcg cgctggcgac
     2761 gcgcgagctg tcgagcctca acgccgcgcg tctcgttctg cgcgaagtgc tcgtggggct
     2821 cgtcaacggc ttggcgttcg ctgttatcac gggcgtcgcc gcggcggcgt ggttcaagtt
     2881 gcctgatctc gggctggtga tcggcctggc gatgatctgc aacctcgtgg caggggcgct
     2941 gggcggaatc ttggtgccgc tggtcctgca gcatttccgc gccgacccgg cgatctcgtc
     3001 gggggtcttc gtcacgactg tgacggatgt cgtcgggttc ttttcgttcc tcggtatcgc
     3061 cacgctgtgg ttcggactca aatgacggcg gacatgccgc gcgaaggcgg gggtgcgcgg
     3121 ccgttccatc gcgatgctgg gtcgctggcc gagtatgcaa tggcccagtc ggtcacaagc
     3181 ttatcggcca agggctccaa tggcgggtgt aaacgcttgg ccaatcagag ggaatcacgt
     3241 aggcctacgg ccgcatgatg cggctcagac tgaaggccga cggccggatc gtcgagatac
     3301 tcccggacgg aagcgagcag gcgcttccga gcccgcttgc ggaaattgca cagcaaatgc
     3361 gctacggccg gccggcgggt ggctgggtcg cggcagcacg ggcggcgcgg gggacagcgg
     3421 cggatgccgt ctatgcgcgc ggcgtgcgcg cgcgcaccaa gctcacccag gcccagttcg
     3481 ccgcacgcat cggagtgccg atcgagacgg tacgcaattg ggagcaaggc aagcgttcgc
     3541 cacgcgggcc tgcgcgcgca ttgcttaaag tgatcgaggc agttcccgac gtcgcattcg
     3601 cggttctcag cacgaacaag ccgccgcagt gacgccggcg tcatcgattc gtccggcgac
     3661 cccgcgccgc gtacctgcgc tacacggtgc gggcatgcgt cctgcgcgcg ggcgccgcca
     3721 cccatgt
//
LOCUS       DATCWM010000651         2027 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_506998, whole genome shotgun sequence.
ACCESSION   DATCWM010000651 DATCWM010000000
VERSION     DATCWM010000651.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2027
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_506998"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1234)
                     /locus_tag="VIQ50_12755"
     CDS             complement(<1..1234)
                     /locus_tag="VIQ50_12755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY9361300.1"
                     /translation="MTTLDVGIAALRSSLSALRSAAERGYDLYDRASAVLKGVMPKGL
                     YARALLIIIAPMVVLQSVVAFMFMERHYNLVTQRLSAGVVQDIATLIEIDKAFPQEQA
                     LLRRIGQDKLGLVVDFLPVTELPQPGPKPFFSLVDQALSEEVRKQIGRPFWIDTVGRS
                     ALLEIRIKLDNAVMRVFAPRRAAYVSNSHIFLAWMVGTSLVLITVAVLFLRNQIRPVL
                     RLADAAESFGKGREVPDFRPRGAREVRRAAVAFIEMKRRIERALEQRTAMLAGVSHDL
                     RTILTRFKLELALIGDSPELEAMKKDVDEMGRMLEAYLAFARGDSGEQSAPTDMGAFL
                     EELKADTERNGHKSSVNFHGHPIVTVRPAAFKRCLANLVSNAARHAPSISITGHRDHR
                     WLTVTVDDDGPGIAPHLRE"
     gene            complement(1231..1947)
                     /locus_tag="VIQ50_12760"
     CDS             complement(1231..1947)
                     /locus_tag="VIQ50_12760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007614855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY9361301.1"
                     /translation="MRGATTTPAALPDDAPHLLVVDDDRRIRNLLSRFLLAEGYRVTT
                     AETADDARAKLAGLRFDLLILDVMMPGETGFDLARDLRASSSVPIIMLTARDEAESRI
                     EGLTIGADDYVGKPFEPRELSLRVASILRRARPAAAPAVESVRFGEFRFHLARGELKR
                     GEQTVRLTDRERDMLRLLAATPGETIPRQTLAGNDGATGERAVDVQINRLRRKIEHDP
                     ANPLLVQTVRGIGYRLVTTP"
BASE COUNT          353 a          651 c          691 g          332 t
ORIGIN      
        1 cttcacgcag atgcggtgcg atgccggggc cgtcgtcgtc cacggtgacg gtgagccagc
       61 ggtggtcgcg atggccggtg atggagatgg acggcgcatg ccgcgcagcg ttggagacga
      121 ggttggcaag gcaacgcttg aaggctgccg gccgcaccgt gacgatcggg tgcccgtgga
      181 agttcacact cgacttgtgg ccgttgcgct cggtgtcggc tttgagctcc tccaggaatg
      241 cgcccatgtc ggtgggcgcg gactgctcgc ccgaatcccc gcgcgcgaag gcgagatagg
      301 cctccagcat gcgccccatc tcgtcgacgt ccttcttcat ggcttcgagc tcggggctat
      361 cgccgatcag cgcaagctcg agcttgaacc gggtgaggat ggtgcgcagg tcgtgcgaaa
      421 ctccggccaa catggcggtg cgctgctcga gcgcccgctc gatgcggcgc ttcatttcga
      481 taaaagcgac cgccgcgcgt cgaacctcgc gcgcgccgcg cgggcggaaa tcaggcacct
      541 cgcgcccttt gccgaaactt tctgcggcat ccgccagccg cagaaccggc ctgatctggt
      601 tgcgcaggaa cagaaccgcc acggtgatca gcaccagcga ggtgccgacc atccaggcga
      661 gaaagatatg cgagttggac acgtaagcgg cgcggcgggg cgcgaatacc cgcatcacgg
      721 cgttgtcgag cttgatacgg atctcgagca gcgccgagcg cccgacggtg tcgatccaaa
      781 acggccgccc aatctgtttt ctgacctcct ccgagagcgc ctggtccacc agcgagaaga
      841 acggcttcgg ccccggctgc ggcaactcgg tgaccggtag aaaatcaacg accagaccga
      901 gcttgtcttg gccgatgcgg cgcagcagcg cctgctcctg gggaaacgcc ttgtcgattt
      961 cgatcaaggt ggcaatgtcc tgcaccacgc cggcggagag ccgctgcgtg accaggttgt
     1021 agtgccgctc catgaacatg aaggcgacaa ccgactgcag gaccaccatg ggcgcgatga
     1081 tgatcagcag cgcgcgtgca tagaggcctt tcggcatgac ccctttgagc acggcgctgg
     1141 cgcgatcata gaggtcgtag ccgcgctcgg ccgccgaacg cagcgcgctc aggctcgaac
     1201 gcagcgcggc aatgccgaca tcgagagtgg tcatggtgtc gttaccaggc gatacccaat
     1261 cccgcgcacg gtctgcacca gaagcgggtt ggccggatcg tgctcgatct tgcggcgcag
     1321 gcgattgatc tgcacgtcga cggcacgctc gccggtggca ccgtcgttgc cggcgagggt
     1381 ttgccgtgga atggtctcgc cgggagtggc ggcgagcagg cgcagcatgt cgcgctcgcg
     1441 atcggtgagc cgcacggtct gctcgccgcg tttgagctcg ccacgcgcga ggtgaaatcg
     1501 gaattcgccg aagcgcaccg attccactgc cggggccgca gccggacgag cgcgccgcag
     1561 gatgctggcg acacgcagcg acagctctct cggctcgaac ggcttgccga cgtagtcgtc
     1621 ggcgccgatg gtcaggcctt cgatgcgact ctccgcttcg tcccgggcag tcagcatgat
     1681 gatcggcacg ctcgaggacg cgcgcagatc gcgggcgaga tcgaacccgg tctcacccgg
     1741 catcatcaca tcgaggatca aaagatcgaa gcgcaatccc gcgagcttag cgcgcgcgtc
     1801 gtcggccgtc tccgccgtgg tgacgcggta gccttcggcc agcaggaacc gcgaaagcag
     1861 attgcggatg cggcggtcat cgtcgaccac caacaaatgc ggggcatcgt cggggagcgc
     1921 ggcgggtgtc gtcgttgcgc ctcgcatcgg ccctcgactc agccgcgcgt ccgccgcgct
     1981 cgatcggcgc gcgcgatgaa gcgtagcacg gcgtcgcgtt gttcgat
//
LOCUS       DATCWM010000652         4918 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_301520, whole genome shotgun sequence.
ACCESSION   DATCWM010000652 DATCWM010000000
VERSION     DATCWM010000652.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4918
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_301520"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            240..1085
                     /gene="panC"
                     /locus_tag="VIQ50_12765"
     CDS             240..1085
                     /gene="panC"
                     /locus_tag="VIQ50_12765"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HEY9361302.1"
                     /translation="MAIRVVRTVSALRHAVIRWRGRGERIALVPTMGALHEGHLALVR
                     AGRRRARRLIVSIFVNPAQFAPHEDLASYPRSLKADLETLTDIAVDLAWAPPAALMYP
                     SGFATRVAPQGPATVGLEDKFRPHFFSGVATVVAKLLIQCAPDFAMFGEKDYQQLKVV
                     TRMAKDLDLPVKIVPVATVRERDGLALSSRNSYLSSGERTAAPTLYRVLADCAGKIAR
                     GELLARVLDEGAAAIERTGFALDYLEARHADSLAPIASLKEGPIRLLVAARIGKTRLI
                     DNIAV"
     gene            1274..3823
                     /locus_tag="VIQ50_12770"
     CDS             1274..3823
                     /locus_tag="VIQ50_12770"
                     /inference="COORDINATES: protein motif:HMM:NF014073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9361303.1"
                     /translation="MRSNKAVDAGAEEAALMELISNLALGFSVSLHPINLFFGFAGVA
                     LGVIIGILPGLGSAATIALLLPITYFLDTTTAVIMLSGIWYGSMYGGSITSILLRVPG
                     EAASVMVAIDGHELTKQGRAGAALGMSVFSAFIAGMVGLLGLGLVAPTLAEFALDFGP
                     PEYFALTLLGLTLVSYLATDSMWKAVAVTLFGLLLGTVGLDPVRSSARFTFGTLSLQS
                     GIDLVPMVMGLFGISEVFHLIEARLAGAAPSKPVHVPRGLLAVLPTRQDWREARRAIG
                     QGTLVGFFVGLLPGGGATISSYVAYAVAKRWAKQPQKFGNGAIAGVAAPESAANAATC
                     SGFIPLLTLGLPDNVVMALILGAFMLHGVTPGPTLMLQQPQIFWAIVTSMFIGNCILI
                     FTMLPMIGLLAKITLIPNNILVSVIVLACVAGAYGVNNNPMDIITMTVFGVVGYLMSK
                     YGYPQAPLVLAFVLGPIMETALRQSLIMSRGDFLVFWKTPVSGVLMTVFAFIVCARLV
                     RGVAGLYRQRAAKTADEPSSNVPAIIGGLVLLALLLPSFGAQAQDYPTKSITIIAPYP
                     PGGRTDLCGRTLAQFLKTELGQPVVVINKPGASGVLGAKEVAGAAPDGYTLGLFSTGF
                     LTAQYTVPTPTDAKDYELIALINVDPAVIAVPEARGWHTLPEYVKYAKENPGKVRVGI
                     DAGSSAQIFAAAFAEKAAIDVTNVPFRGGGERTVALAGGHIDADFDILAPLKTMREAK
                     KVRVLGVAAEHRLPEYSDIPTMKEGGVDLSISSWHGVFAPAGTPAAVVARINAATAKV
                     AANPEFQSRMRDLVLGVRYLDTAQFKSFFAENDKLYYELIKKLGLLANPSK"
     gene            3843..4646
                     /locus_tag="VIQ50_12775"
     CDS             3843..4646
                     /locus_tag="VIQ50_12775"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEY9361304.1"
                     /translation="MTIHRPTYANAKTTLETEITALRRRVARAHRILTAGGIWPLTKG
                     HVSARIPGTDHVLILGHIHSEGRSLIDTDIDDIVTVDLEGNWLEGRIEPVDERYLHLE
                     IMKSRPDVTSVVHAHPTYATAFGIAGVNILPVGNRGAIFAPQVPILDFDRQIDTPERG
                     RMCRDAIGDGLALVLKNHGVAVCGDSIENATIATFALEETAQLQWIAAQVGPVQKIST
                     GEVRSVLTGARKEEFYSHVWGHYARLDPWFSAPEQEHSNRGQVKAPAQR"
BASE COUNT          846 a         1591 c         1528 g          953 t
ORIGIN      
        1 ccggcgcgcg gccgcgatcg gtcgatggcg ggtcttgacg atcattggcc atggcagcag
       61 gcacttcaaa caggcggcaa gcccgccgcc cgttaaggtg gccatatccg tcttccggcg
      121 caatggccgt cggcccgcag cgccgtgcgg caacaggttg cgagcagcca cgtggcctct
      181 cacccgcggc tttgctaatt tgcccgcgac tgcgtttcaa tcgaacgaac tctatcccca
      241 tggccattcg agtcgtgcgc acggtgtcgg cactgcgcca cgctgtcatt cgctggcgcg
      301 ggcgcggcga gcgcatcgca ctggtgccga ccatgggcgc gctgcacgaa ggccatctcg
      361 cactcgtgcg cgcgggcaga cggcgcgcgc ggcggctgat cgtctcgatc ttcgtcaacc
      421 ccgcgcagtt tgccccgcat gaggatttag ccagctatcc gcgcagcctc aaggccgatc
      481 tcgagacgct caccgacata gcagtcgacc tggcgtgggc gcctcccgcg gcattgatgt
      541 atccctctgg ctttgccacg cgcgtcgcac cgcaggggcc cgcaaccgtg gggctcgagg
      601 acaaatttcg cccgcatttc ttttccggcg tggccaccgt ggtggcaaag ctcctgattc
      661 aatgtgcccc cgatttcgcg atgttcggcg agaaggacta ccagcaactc aaggtggtaa
      721 cgcggatggc gaaggacctc gatctgccgg tgaagatcgt accagtcgcg accgtgcgtg
      781 agcgcgacgg cctcgccctt tcttcgcgca acagctatct ctcctcgggc gagcgcacgg
      841 ctgcgccgac cctttaccgg gtgctcgccg attgcgccgg gaagatcgcg cgcggagaac
      901 tccttgcccg cgtgctcgac gagggcgctg cggcgatcga gcgcaccggc tttgctctcg
      961 actatctcga ggcccgccat gccgattcgc tcgcacccat cgcctcgctc aaggagggcc
     1021 cgatccggct gctggtcgcc gcgcgcatcg gcaagacgcg gctgatcgac aacatcgcgg
     1081 tgtgattaga gcggccggcg cggcacctcc ggcgtcgcga ttaccgagac gggtaggcgg
     1141 cggcaacccg tccctgctgg cggcgattcg tggagacgcc ggcgtggcga aaaaaagcgc
     1201 gcgggttgac tcctgggcct gagatgtatt ctgaatacac attcagcgag cggccgcggc
     1261 gcagcagaac gccgtgcgga gcaacaaggc cgtcgatgca ggtgccgagg aggctgcgct
     1321 tatggagttg atttccaacc tggcgctggg cttttccgtt tcgctgcatc cgatcaattt
     1381 attttttggc ttcgccggtg tggcgctggg cgtcatcatc ggcattttgc ctggcctcgg
     1441 ttccgccgcg acgatcgccc tgctcctgcc gataacctat ttcctcgata ccactaccgc
     1501 cgtgatcatg ctctcgggga tctggtacgg gtccatgtac ggcggctcga tcacctcgat
     1561 ccttctgcgc gttccgggtg aagcggcgtc tgtcatggtc gccatcgacg gtcacgaatt
     1621 gaccaagcag ggccgcgccg gggctgcgct tggtatgtcg gtcttcagtg ccttcattgc
     1681 cggcatggtc ggccttctgg ggctcggcct ggtcgcgccg acgctcgccg aattcgccct
     1741 cgatttcgga ccgccggaat attttgcgct gacgctgctg gggctgacat tggtcagcta
     1801 cctcgcgacc gattccatgt ggaaagccgt cgcggtgacg ctgttcgggt tgctgctcgg
     1861 cacggtcggg cttgatccgg tccgcagctc ggcgcgtttc acgttcggca cgttgagtct
     1921 tcaatccggc atcgatctcg tgcccatggt catggggctg tttggcattt ccgaagtttt
     1981 tcacctgatc gaggcacgcc tcgccggcgc agcgccgtcg aaaccggtcc atgtgccacg
     2041 cggtttgctg gccgtcttgc caacccgcca ggactggcgc gaggcgcggc gtgcgatcgg
     2101 ccagggaacg ctggtcggat tttttgtcgg cctgctgccc ggcggcgggg cgacgatttc
     2161 gtcctatgtg gcctatgccg tggccaagcg ctgggccaag cagccgcaga aattcggcaa
     2221 cggggcgatc gccggagtgg cagcaccgga gtcggcggcc aatgccgcga catgcagcgg
     2281 gttcatcccg ttgctcaccc tgggcttgcc ggacaacgtc gtcatggcgc tgatcctcgg
     2341 cgccttcatg ctgcacgggg tcacgccggg gccaacgttg atgttgcagc agccccagat
     2401 cttctgggcc atcgtgacca gcatgttcat cggaaactgc attttgattt tcaccatgct
     2461 gccgatgatc gggctcctgg cgaagatcac gctcatcccc aacaacatcc tcgtatcggt
     2521 catcgtgctg gcctgtgttg ccggggccta tggcgtgaat aacaatccga tggacatcat
     2581 caccatgacg gtgttcggcg tcgtcggcta tctaatgtcg aaatacggct acccgcaggc
     2641 cccattggtg cttgccttcg ttctcggccc gatcatggag acggcgctgc gacagtcact
     2701 catcatgtcg cgcggcgatt ttctggtgtt ctggaaaact ccggtctcgg gggttctcat
     2761 gacggttttc gcattcatcg tctgcgcgcg gctggttcgc ggggtggctg ggctctatcg
     2821 ccaacgcgcg gcgaagaccg ccgatgagcc gtccagcaac gtgccggcca tcatcggcgg
     2881 gctcgtccta ctcgctctgc tgttgccgtc cttcggcgcc caggcgcagg actacccgac
     2941 caaatccatc accatcatcg cgccctaccc gcccggcggg cgcaccgatc tttgcgggcg
     3001 aacgctcgcg caattcttaa agacagaact gggccaaccg gtcgttgtca tcaataagcc
     3061 cggcgcgagc ggcgtgctcg gcgccaagga ggtggccggc gcggctcccg atggctacac
     3121 gctcggcctc ttctcgaccg gctttctcac cgcccagtac accgtgccga cgccgaccga
     3181 cgccaaggac tacgaactga tcgccctgat caacgtggat ccggcagtca tcgccgtgcc
     3241 cgaagcgcgc ggctggcaca cgctgccgga gtacgtgaaa tacgccaaag aaaatccggg
     3301 caaggtgcgg gtcggcatcg acgccggcag ctcggcccag atctttgccg cggcctttgc
     3361 cgaaaaggct gcgatcgatg tgaccaacgt gcccttccgc ggcggcggtg agcggacagt
     3421 cgcgcttgcc ggcggccaca tcgatgccga tttcgatatc ctcgcgccac tcaagaccat
     3481 gcgcgaggcg aagaaggtgc gcgttctcgg cgtcgccgcc gagcaccgcc ttcccgaata
     3541 ttccgacata ccgaccatga aggagggtgg tgtcgatctc tcgatttcat cctggcatgg
     3601 cgtgttcgca cccgcaggca cgcctgccgc tgtggttgcg cgcatcaacg cggccactgc
     3661 caaagttgcc gccaatcccg agtttcaaag ccggatgcgc gatctggtgc tcggtgtgcg
     3721 ctatctcgac acggcgcagt tcaagtcatt ttttgccgaa aacgacaagc tctactatga
     3781 gctgatcaag aagctcggtt tgctggcgaa cccctcgaaa tagccaggca ggagaaccgc
     3841 cgatgaccat ccatcgtccc acctatgcca acgccaagac tacgctcgaa accgaaatca
     3901 cggcattgcg tcgccgcgtg gcgagagccc atcgcatcct caccgccggc ggcatctggc
     3961 cgctgacgaa ggggcatgtc agcgcgcgga ttcccggcac cgatcacgtg ctgatcctcg
     4021 gtcacatcca ttcagagggg cgttcgctca tcgataccga catcgacgac atcgtcacgg
     4081 tggatctgga gggcaattgg ctagaaggcc gcatcgagcc ggtcgacgaa cgatatttgc
     4141 atctcgagat catgaagagc cggccggacg tgacctcggt agtgcacgcc catccgacct
     4201 acgctactgc gttcggaatc gccggggtca acatcttgcc ggtcggcaac cgcggtgcaa
     4261 tcttcgcgcc gcaggtgccc atcctggatt tcgaccggca gatcgacacc cctgagcgcg
     4321 gccgcatgtg tcgagacgcc attggcgacg gcctcgccct cgtgctcaag aaccacggcg
     4381 ttgccgtctg cggcgattcg atcgagaacg ccaccatcgc gacatttgcg ctggaggaga
     4441 ctgcccagct gcaatggatc gccgcccaag tcggccccgt gcagaaaatc tccaccggcg
     4501 aggttcgcag cgtactcacc ggcgcgcgca aggaagagtt ctatagccac gtctggggcc
     4561 actacgcgcg gcttgatccg tggttttcgg cgcccgagca agagcattca aaccgcgggc
     4621 aggtcaaggc gccagcgcag cgctagcacc tttcacgaca gctggcgagg ctgtcgcgaa
     4681 cggagagccc gcggcgtcca gcaacaccgt gcgtcgtcgc gaacgcactc acgtcgcatc
     4741 gcgtcatcga cgcgcatcga gaaatgagaa gatcttggcc tagtcggccg cttcaaccaa
     4801 tttgaaagga tttagtgatt tgatttcgtc gccaacgact ggcgagggga ggcaatcatg
     4861 gctgcgaagg agatttcggt aaagaagtat gttgtgaggc tgagcggcga ggaacgcg
//
LOCUS       DATCWM010000653         2320 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_507005, whole genome shotgun sequence.
ACCESSION   DATCWM010000653 DATCWM010000000
VERSION     DATCWM010000653.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2320)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2320)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2320
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_507005"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..429)
                     /locus_tag="VIQ50_12780"
     CDS             complement(<1..429)
                     /locus_tag="VIQ50_12780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006335083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2161 family putative PD-(D/E)XK-type
                     phosphodiesterase"
                     /protein_id="HEY9361305.1"
                     /translation="MRQETSLYVPVKRFLETLGFDVKGEVCGCDLVAIRGEEPPLVVV
                     GELKLAFNLELVLQGIDRSAACDEVWLAVRTSGRGGRERDPRVRKLCRLLGFGLLGVS
                     TSGRVELLVEPAPWRPRRDAKRRSRLVDEHRRRLGDPVLGG"
     gene            844..1137
                     /locus_tag="VIQ50_12785"
     CDS             844..1137
                     /locus_tag="VIQ50_12785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEY9361306.1"
                     /translation="MSAKATRPVTLKHLAARLAADHELTKRAGEAILSDLVSLITKHL
                     KKGERIKIAGFGILQVRARAARMGRNPATGEAIKIKASKKVAFRPAKHLKMAV"
     gene            complement(1258..1536)
                     /locus_tag="VIQ50_12790"
     CDS             complement(1258..1536)
                     /locus_tag="VIQ50_12790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361307.1"
                     /translation="MSDSTESNEERPCLHCLIGDVIDEFYAEYGSTSGDRDAIDVDEV
                     ITALAKTVAELTYGSDAAMRQRILDTLMREISEFESEFANTPASDMRH"
     gene            1907..2194
                     /locus_tag="VIQ50_12795"
     CDS             1907..2194
                     /locus_tag="VIQ50_12795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361308.1"
                     /translation="MRDYVRARLGLALGVHAMPCANEIKQHPFLEEEQHAKHKMFSRS
                     IWDVAKAAKGIRMLLLTAVSCCRILLPPLPLRLLHQHLRCTLRLELRRIEQ"
BASE COUNT          431 a          729 c          708 g          452 t
ORIGIN      
        1 gccgccgagc acggggtcgc cgagacgccg ccgatgctcg tcgacgaggc gcgatcggcg
       61 ctttgcgtcg cggcgaggac gccacggggc cggctcgacc aagagctcga cgcggccgct
      121 cgtcgagacg ccgagcaggc cgaaacccaa cagccggcaa agcttgcgca cgcgcggatc
      181 gcgctcgcgc ccgccacgcc ccgaggtacg cacggcaagc cagacctcat cgcaggccgc
      241 gctgcgatcg atcccttgca acacgagctc aaggttgaag gcgagcttca actcgccgac
      301 gaccacgagc ggcggctcct cgccgcggat cgcgacgaga tcgcaaccac agacttcgcc
      361 cttgacgtcg aaaccgagag tctcgaggaa ccgtttcacc gggacgtaga gcgaggtttc
      421 ctgcctcacc ggcttgatcc gttgcgatgg ttgaggtggc atggctgctt ctggccgcgc
      481 gaagcgcgct cgcctgtaat cgatctgcgg cgaccatgag cccgccgtcg taagtgcttc
      541 gttaagagcg gtgcgcggcg cgcgcaaaca tccttgcaac ggcggcagcg accggcgcgt
      601 gctcgttcga agggaacgac gttcccgttg cgattccgct tcgttcccgg atcgattccg
      661 aaatgtgccg cgaaggcgcg cggcggcagg ctaacgcgtg gcttccgaga tgcccaccgg
      721 accgcacaag tttcggatat tccagtggaa agagtgcttt tcttccggtc tcgaatcata
      781 tctcttaggc taagagtcgc atttcgcggc tctgaggagg gcatcatggc gggcaaagca
      841 acgatgagtg cgaaggccac tcgtccggtt acgctcaagc atttggcggc aagattggcg
      901 gcggatcatg aactgacgaa gcgcgcgggt gaggcgatcc tcagcgacct cgtgagcctg
      961 atcaccaagc atctcaagaa aggcgaacgc atcaagattg caggttttgg catcctgcag
     1021 gtccgggcgc gcgcggcccg catgggccga aatccggcga ccggcgaggc catcaagatc
     1081 aaggccagca agaaggtcgc gttccgcccg gccaagcact tgaagatggc cgtctagtcg
     1141 taccggcgta gaaatcgcac atacctgccc cgtcggtccg ccaccgacgg gggagtatgc
     1201 gttttggcga gcattcgccg cctgtgttag cgatgatccg gtcggcgcgc cccccgctta
     1261 gtgccgcatg tcgctcgccg gcgtgttggc aaattcagac tcaaattcgg aaatttcccg
     1321 catcaacgta tcgaggatgc gctggcgcat cgcggcgtcc gagccgtatg tcagctctgc
     1381 gacggtcttg gcgagcgcgg tgatgacctc atcgacatca atcgcgtctc gatcgccgct
     1441 ggtggagccg tactcggcat agaactcgtc gatcacgtca ccgatgagac agtgcaggca
     1501 cggccgctct tcgttggatt cagtactatc cgacatggtc atcctcgcat acgcggatcg
     1561 ggtccggtgg gtcgccggcg tgccggctgc gccttgcacc cgtccgcgtt tgaaaatctt
     1621 ggcggtcccg agagaaccgc ttccacttaa gtatgatcga gggcttatag cggcaaaccc
     1681 ccgcccacgg ccactttgac ccgtaacggt tatttcggcc aatggcaaac ctggacacat
     1741 gcgcatccac gatgtgcgtg ccgcagcgcg tgcgcgtggg ggcgacgttt gtcgcttgtc
     1801 ctggttccgg tcactcgtaa gctgatcgat cgtcgggtgt gcgattagcc ccgggcagcc
     1861 ccgacgtctt cttcattttt agccccgcag gcgatccatt tggcgaatgc gggattacgt
     1921 tcgtgcgcgg ctcgggcttg cgcttggcgt ccacgccatg ccatgcgcca acgagatcaa
     1981 acagcatccc tttctagagg aggaacaaca cgccaaacac aagatgtttt cgcgctccat
     2041 ctgggatgtg gccaaggctg cgaagggcat ccgaatgttg ttgctcaccg ccgtttcttg
     2101 ctgccgcatt cttcttccgc ctctcccctt gcggctactg caccagcacc tgcgctgcac
     2161 cttacggctt gagctacgcc gcatcgaaca gtgattacgg atcgtccagc tactaccggc
     2221 ggccttaact cgccgcgttg gtcttgtcct tgaaataaag ggatcggaaa ttgttattgg
     2281 cggtcccgag aggacttcca cgatcccaca atttcgttgg
//
LOCUS       DATCWM010000654         2307 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_361095, whole genome shotgun sequence.
ACCESSION   DATCWM010000654 DATCWM010000000
VERSION     DATCWM010000654.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2307
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_361095"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            230..1048
                     /locus_tag="VIQ50_12800"
     CDS             230..1048
                     /locus_tag="VIQ50_12800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HEY9361309.1"
                     /translation="MQLTREQIESFEEQGYLFFPNCFAEEEVALLRSEADEIFRTNRQ
                     EVWREKTGAPRTAFAAHTYNEAFRLIAHHPRLVEPLQQLFGEGVYVHQFKINAKAAFE
                     GDVWQWHHDYGTWARDDGMPLPRAMNISIFLDEVLPINGPLMLIPKSHKYGTLAAGHD
                     TSTTSYPLWTLDPATVTRLCAEGAPPDGVGIVAPTGKPGSVLMFHGNLVHASPPNITP
                     YPRKIVYLTLCAVSNHITKFTRAEWIAHRDFTPIVPVEDDALVTHARAHRVAAE"
     gene            1222..1854
                     /locus_tag="VIQ50_12805"
     CDS             1222..1854
                     /locus_tag="VIQ50_12805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEY9361310.1"
                     /translation="MYTLYSMQRSGNSYKVRLALAQLGIPYRLVEIDILKGDSRTPEF
                     LAKNPHGQVPLLEAAPGRYLAESNAILWHLVSRTPLRPEHRIDRAEALQWMFFEQHSI
                     EPNIGAAYFWLTLVKGGRELQQHALEDWMEEGYRSLAVMEHHLKHRRYFVEDRYTVAD
                     IALYAYTHLAHACDYDLTSFPEIRGWLERVAAQPDHVTMDWQPATAVPAE"
     gene            2047..>2307
                     /locus_tag="VIQ50_12810"
     CDS             2047..>2307
                     /locus_tag="VIQ50_12810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361311.1"
                     /translation="MPKMPARRSARERESRQGCMPRQRPIALVELIITAALVLSTVVA
                     VTAVSIGFARAEVAGAVPKGDGLPFAIALGIALLLTAMSGATA"
BASE COUNT          421 a          799 c          699 g          388 t
ORIGIN      
        1 ggcaagtctc attcgccgat gcacacacca gtgtgatggc atcggtcgga aacgcgcgtt
       61 gcccccggtg ccggccgcgg tcgagccgcg ccggcgcgag gcgggcccga ccccggcgtg
      121 aggaacccgc cgccgcccat gggccttccc attcgccgcc ccggtgattt tgccggcgtt
      181 ggccgctaga ctgcccgctg ccaggaaacg cagtccccgg gaggacgcca tgcagctcac
      241 gcgcgagcag atcgagagct tcgaggagca gggctacctg tttttcccga attgcttcgc
      301 cgaagaggag gtcgcgcttc tgcgcagcga ggcggacgag attttccgga ccaaccggca
      361 ggaggtctgg cgtgaaaaga ccggcgcgcc gcgcaccgct ttcgccgcgc acacctacaa
      421 cgaagcattc cgcctgattg cgcatcaccc gcggctggtc gaaccgctgc agcaattgtt
      481 cggcgagggc gtctacgtcc atcaattcaa gatcaatgcc aaggcggcat tcgagggcga
      541 cgtctggcaa tggcaccacg actacggcac gtgggcgcgc gatgacggca tgcctcttcc
      601 gcgcgcgatg aatatctcga tcttcctcga cgaggtcctg ccgatcaacg gtccgctgat
      661 gttgattccg aaaagccaca aatatggcac gctcgctgcc ggtcacgaca cgagcacgac
      721 ctcctatccg ctttggacgc tcgatcccgc gacggtgacg cggctctgcg cggagggcgc
      781 gccgccggac ggcgtgggca tagtggcgcc gaccggcaag ccgggctcgg tgctgatgtt
      841 ccacggcaat ctcgtgcacg cgtcgccgcc caacatcacg ccttacccgc gcaagatcgt
      901 gtatctcacg ctatgcgccg tctccaatca catcaccaag ttcacccgcg ccgaatggat
      961 cgctcaccgc gatttcacac cgatcgtgcc ggtggaggac gacgccctgg tcacacatgc
     1021 gcgcgcgcat cgcgtcgcgg cggaatgacg gcgaaatgat tttctgcccg tgaccgccgc
     1081 ggcagcagat gtggactgcc gttcgccctg tcggtagtca gcatccactc ctcggccccc
     1141 gcgtgcgcca tgacattgcc gtgctgatgc attaacccat attcaaacag acggctgaag
     1201 agcaccgctg gcaggcaggc gatgtatacg ctctattcga tgcagcgatc gggcaatagc
     1261 tacaaggtgc gcctcgcgct cgcccagctc ggcatcccct accgcctggt cgaaatcgat
     1321 atcctcaagg gcgacagccg cacgccggag ttcctggcca agaatccgca cggccaggtg
     1381 ccgctgctcg aagccgcgcc cggccgctat ctcgccgaat cgaacgcgat cctttggcac
     1441 ctcgtgagcc gcacaccgct gcggccggag caccggatcg atcgcgccga agcgctgcaa
     1501 tggatgttct tcgagcagca cagcatcgag cccaatatcg gcgccgccta tttctggctc
     1561 acgctcgtca agggcggccg cgagctgcag cagcacgcgc tcgaagactg gatggaggag
     1621 ggctaccgct cgctcgcggt gatggagcat cacctcaagc accgtcgcta tttcgtggaa
     1681 gatcgctaca ccgtcgccga catcgcgctc tacgcctaca cgcatctcgc ccatgcgtgc
     1741 gactacgacc tcacgagctt tcccgagatc cgcggctggc tcgagcgcgt cgcggcgcag
     1801 ccggaccatg tcaccatgga ttggcagccg gccaccgcgg tgccggcgga atgaacggcc
     1861 cggcacgccg ggctgggcgc cgaatagcaa tttttcttgc accgacgcac gaccggttcg
     1921 cggcgttaac cattcattaa cctaaaacat aaatttgccc cgcttcgcca aagtgttcgc
     1981 ccaactccgg ccgaaccgac gccggcatgc gccgacaaat tgctcgggtg attcgaggag
     2041 actgacatgc cgaaaatgcc agccaggcgc agcgcaaggg agcgtgagag ccgtcagggc
     2101 tgcatgccga ggcagcgccc catcgctctc gtcgaattga tcatcaccgc cgcgctcgtc
     2161 ttgtcgacgg tcgtcgccgt caccgccgtc tcgatcggct tcgcgcgcgc cgaagtcgcc
     2221 ggcgccgtac caaagggcga cggcctcccg ttcgcgattg cgctgggcat cgcactgctg
     2281 cttaccgcga tgagcggggc caccgcc
//
LOCUS       DATCWM010000655         7605 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_274855, whole genome shotgun sequence.
ACCESSION   DATCWM010000655 DATCWM010000000
VERSION     DATCWM010000655.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7605
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_274855"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..303)
                     /locus_tag="VIQ50_12815"
     CDS             complement(<1..303)
                     /locus_tag="VIQ50_12815"
                     /inference="COORDINATES: protein motif:HMM:NF017999.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEY9361312.1"
                     /translation="MEFDNSFEVPLPPAEAWKVLLDIKRIAPCMPGAELTEVLDQNSY
                     KGKIGVRLGPVALTFAGVVKFEQIDAATHTARVAAQGTDAKGRGGANATSVFRLEPA"
     gene            complement(310..1797)
                     /gene="tcuA"
                     /locus_tag="VIQ50_12820"
     CDS             complement(310..1797)
                     /gene="tcuA"
                     /locus_tag="VIQ50_12820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent tricarballylate dehydrogenase
                     TcuA"
                     /protein_id="HEY9361313.1"
                     /translation="MASSQADVIVVGAGNAAFCAALAAQEQGASVLMLEAAPEEESGG
                     NSRFTAGSVRVVYNGVDDIKALVPDLTDQEIATTDFGTYTREQFFDDMARVTQNRADP
                     DLVELLVTRSFDTFCWMRDKGVRFIPIYGRQAFKLEGKFKFWGGLTVEAVGGGPGLIQ
                     MLTDSATKRGIEIRYRTRALSLLYDGVRVAGVRIRHDGVESELRSKSVVLACGGFESN
                     SEWRTRYLGPGWDLAKVRGTRFNTGDGIRMAMDIGASPCGNWSGCHAVQWEMNAPEFG
                     DLAVGDQFQKHSYPFAILVNGAGKRFVDEGADFRNYTYAKYGRVVLEQPGQFAWQIFD
                     RKVKHLQRDEYKIRQITKVVADSIEEFATKLEGVNAEQFLKTIAEYNKAVRRDIPFNP
                     NIKDGRRTEGLTIDKSNWANTVDEPPFEGYAVTCGLTFTFGGVRITTEAEVLNTDYQP
                     IHGLYAAGELVGGLFYFNYPGGSGLTSGAVFGRIAGTSAARAGKN"
     gene            complement(1829..2875)
                     /gene="pyrC"
                     /locus_tag="VIQ50_12825"
     CDS             complement(1829..2875)
                     /gene="pyrC"
                     /locus_tag="VIQ50_12825"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007561868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEY9361314.1"
                     /translation="MTARITIRKPDDWHLHVRDGAMLKAVMPFTARHFGRAILMPNLV
                     PPVITTKDAIAYRERVMAALPAGSTFKPLMTCYLTDDTDPDDVERGFSEGVFTGVKLY
                     PAHATTYSAAGVTDYRNVMPVLERMEKIGMPFLMHGEDVDPEVDIFDREAMFIERYLT
                     KWTRQFPALRFTLEHLSSKDGVDFVRSAAPQVGGTITPYHLVLTRTDWLGWGLKPYMY
                     CMPVIKTARDRAALRKAATSGEACYFLGTDSAPHPVAKKVAVNGIPGLFNAPVAIETY
                     TKVFEEETALDKFEAFASLNGPRHYRLPPNEDTITLEKSAWTAPPEVDVEGPDEKALI
                     YRGGETIEWKVVSG"
     gene            complement(2916..3854)
                     /locus_tag="VIQ50_12830"
     CDS             complement(2916..3854)
                     /locus_tag="VIQ50_12830"
                     /EC_number="1.3.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HEY9361315.1"
                     /translation="MSVKIGSVTLKNPIMPASGCFSTDLAQVIDLNRLGALVAKTVSR
                     EFRAGNPPPRVSEVEGGMINSIGLPTKGIDYFLSHQVPEYKRFSPPLVGSISATTIED
                     FEAMARDVSPSEIDVLEVNISCPTRDPKGGNFALHEEHTFNVMRRIRATTDKPIWCKL
                     SPNAGDVVAIARAAEAAGADALVVSNTILGLKIDVNTFRPAIGNKFGGLSGPGIKPII
                     VRMVYQCAKAVKIPIIGCGGIVKIEDVVEYMLAGASAVMIGYLIFRNPSGIIAIIEGL
                     EEWCGRRGFARVADLTGAMIDEAPRETYAAAAAPIG"
     gene            complement(3857..4723)
                     /locus_tag="VIQ50_12835"
     CDS             complement(3857..4723)
                     /locus_tag="VIQ50_12835"
                     /inference="COORDINATES: protein motif:HMM:NF021903.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase electron transfer
                     subunit"
                     /protein_id="HEY9361316.1"
                     /translation="MAHRPFASAPYVVGKSAPAPAEHHIPAEESLCPVVSHDWVNSEY
                     KHLVVDASPKALAVKPGQFFNLLCPSPDAGELWLRRPQSVYRIDPQNRRVEFLYKCVG
                     RGTYGLATLEVGDELNMVGPLGVGFTIDPACKHIVVLGRGVGLATLAPISQLAGESGI
                     GVTAILSARSAEFVMADDLFAKVGEVIAVLDSDGSSAVEHVETILKRLIAQRRADAFY
                     TCGSNRLFQLMKRLGKTHGILGQVAMEQVMACGLGPCYVCVRTFEVEGKKELRRVCIE
                     GPVFDLQEAVGW"
     gene            complement(4802..5320)
                     /locus_tag="VIQ50_12840"
     CDS             complement(4802..5320)
                     /locus_tag="VIQ50_12840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEY9361317.1"
                     /translation="MKETRKIAVTVNGKRYEEEVEVRVTLADFIRHQLGLTGTHLGCE
                     HGVCGACTILFDDRSARSCLMLAVQADGHDILTVEGIAPSPDKLHPLQQAFHEHHGLQ
                     CGFCTPGILTTLIEFLRDNPDPSEQEVRIAISGNLCRCTGYQNIVVATLDAAKRLQAE
                     APQSQSSAAPRS"
     gene            complement(5329..6213)
                     /locus_tag="VIQ50_12845"
     CDS             complement(5329..6213)
                     /locus_tag="VIQ50_12845"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HEY9361318.1"
                     /translation="MKPPPFRYHDPKTVSEAVGLLASLENAKLLAGGQSLMPMLNMRF
                     VLPDHIIDLNRVEGLSYIRDTQGALDIGAMTRQRDLEFSEAVRARWPIMHEALLQVGH
                     RQTRNRGTIGGSLCHLDPAAELVSLATGYDATVTVAGPTGQREVAFAEFPVAYMTPAI
                     EANELVVGVRFPQWAAKHGYAFVEFSRRHGDFAITSAAVLLEGDAGGKVTRASVTIGG
                     MGTVPRRAREVEEAIVGQVPAGTLFRDACESCRKLEAIDDVHAPASYRQHLAAVLSRR
                     ALEKAHARLLEAHGGGPH"
     gene            6354..7211
                     /locus_tag="VIQ50_12850"
     CDS             6354..7211
                     /locus_tag="VIQ50_12850"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HEY9361319.1"
                     /translation="MKPARFRYHAPKTIEEAVDTLAEVAGEDGRVLAGGQSLVPIMAF
                     RLACPAHLVDINDVEALRRLTVEGQRLCIGACVRHAAFHTPVVDGPLGRLLATVVRHI
                     AHYPIRTRGTFCGSIAHADPAAEWCLVAAALGAEMVARRAAGTRTIPAQDFFRGIMTT
                     ALKEDELLIEVRLPVLPADTRFGFYEFNRRAGDFALGMALVTFRLQDGVIREPRVALG
                     GVESQPRRIAEAEQLLAGRSAERAAFEAAAAAVASVVDPLEDAVTSATYRRDLSRTVT
                     RRALERAAA"
     gene            7208..>7605
                     /locus_tag="VIQ50_12855"
     CDS             7208..>7605
                     /locus_tag="VIQ50_12855"
                     /inference="COORDINATES: protein motif:HMM:NF013482.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361320.1"
                     /translation="MTAEVGAGTAAQGRPRHECGGEGVSPVPAASNKWIGRSVTRLED
                     PPLVRGRGRFAADISFAHQLHMRIVRAHHAHGKIVSIDTSAARALPGVLAVWTAADLA
                     EVPPIDFRDGRIPAFEPYRQPVLATEKVRYV"
BASE COUNT         1296 a         2412 c         2500 g         1397 t
ORIGIN      
        1 ggccggctcg agccggaaaa ctgaggtggc gttggcgccc ccgcgtccct tggcatcggt
       61 gccttgcgcc gcaacgcgcg cagtatgggt ggcagcgtcg atctgctcga acttgacgac
      121 gccggcgaag gtcaaggcga ccggtccgag ccgcacgccg atcttgccct tgtagctgtt
      181 ctggtcgagc acctcggtca gctcggcgcc cggcatgcac ggtgcgatgc gtttgatgtc
      241 gagcagcacc ttccaggcct cggcgggcgg cagcggcact tcgaacgagt tgtcgaattc
      301 catgaccgct caattcttgc cggcgcgcgc cgccgaggtg ccggcgatgc ggccgaacac
      361 cgcgcccgag gtgaggccgg agccgccggg atagttgaaa taaaacaggc cgccgaccag
      421 ctcgccggcg gcataaagcc cgtggatcgg ctgatagtcg gtgttgagca cttccgcctc
      481 ggtggtgatg cgcacgccgc cgaaggtgaa ggtgaggccg cacgtcaccg cgtagccttc
      541 gaacggaggc tcatcgacgg tgttggccca attgctcttg tcgatggtga gcccctccgt
      601 gcggcgcccg tccttgatgt tcggattgaa cgggatgtcg cggcgcaccg ccttgttgta
      661 ctcggcgatg gtcttgagga actgctccgc gttcacgccc tcgagcttgg ttgcgaattc
      721 ctcgatcgaa tcggcgacga ccttggtgat ctgccggatc ttgtactcgt cgcgctgcag
      781 atgcttcacc ttccggtcga agatctgcca ggcgaactgg cccggttgct ccaacactac
      841 gcggccgtat ttggcgtagg tgtagttgcg gaagtcggcg ccttcgtcga cgaagcgctt
      901 gccggcgcca ttgacgagaa tggcgaacgg gtaggagtgc ttctgaaact gatcgccgac
      961 ggcgaggtcg ccgaactcgg gtgcgttcat ctcccattgc accgcgtgac agccggacca
     1021 gttcccgcag gggctggcgc cgatatccat cgccatgcgg atgccgtcgc ccgtgttgaa
     1081 gcgcgtgccg cgtaccttgg cgaggtccca gccgggcccg aggtaacgcg tgcgccactc
     1141 ggaattcgat tcgaaaccgc cgcatgcgag cacgaccgat ttgctgcgta gctcgctttc
     1201 gacgccatcg tgccggatgc gcacgcctgc cacccgcacc ccgtcgtaga ggagactaag
     1261 cgcgcgcgtg cggtagcgaa tctcgatgcc gcgcttcgtg gcggagtcgg tgagcatctg
     1321 gatgaggcct ggcccgccac cgactgcctc gacggtgagg ccgccccaga acttgaattt
     1381 gccctcgagc ttgaacgcct gtcggccgta gatcgggatg aagcgcacgc ccttatcgcg
     1441 catccagcag aacgtgtcga agctcctcgt caccagcagc tcgaccaaat caggatcggc
     1501 gcgattttgc gtcacacgcg ccatgtcgtc gaagaactgc tctcgggtat aggtgccgaa
     1561 atcggtggtg gcgatttcct ggtcggtgag gtcagggacc agcgccttga tgtcgtcgac
     1621 gccgttgtaa accacacgca ccgatcccgc ggtgaagcgg ctgttgccgc ccgattcctc
     1681 ctccggcgct gcctccagca tcagcactga tgcgccttgt tcctgcgccg ccagcgccgc
     1741 gcaaaacgcc gcgttgccgg cgcccacgac gatgacatcg gcctgcgagc ttgccatttc
     1801 gcctctcata cctccttagg cgcagatgtc agccggacac gaccttccat tcgatggttt
     1861 ccccgccgcg atagatcagc gccttttcat cgggcccctc gacgtcgacc tccggcggcg
     1921 cggtccatgc agacttttcc agcgtgatcg tgtcttcgtt cggcggcagc cgatagtgcc
     1981 tgggaccgtt gagggaggca aaggcctcga acttgtcgag ggcggtttcc tcctcgaaca
     2041 ctttggtata ggtctcgatc gcgaccggcg cgttgaacag gcccgggatg ccgttcacgg
     2101 cgaccttctt ggccaccgga tggggcgccg agtcggtgcc gagaaaatag caggcctcgc
     2161 ccgaggtcgc ggccttgcgc agcgccgcgc ggtcgcgtgc cgttttgatg accggcatgc
     2221 agtacatgta cggctttagc ccccatccga gccaatcggt gcgcgtgagt acgagatgat
     2281 agggcgtgat cgtaccgccg acctgcggcg ccgcgctgcg cacgaaatcg acgccgtcct
     2341 tggacgaaag atgctccaag gtaaagcgta gcgcagggaa ctgccgcgtc catttggtga
     2401 gatagcgctc gatgaacatg gcttcgcggt cgaagatgtc gacctcggga tcgacgtcct
     2461 cgccgtgcat caggaacggc atgccgatct tttccatccg ctcgagtacg ggcatgacgt
     2521 tgcgatagtc ggtcacgccg gcagccgagt aggtggtggc gtgggcggga tagagtttga
     2581 ccccggtgaa tacgccctca ctgaacccgc gttcgacgtc gtcgggatcg gtatcgtcgg
     2641 tgaggtaaca ggtcatcaag ggcttgaacg tcgaccccgc gggcagcgcg gccatcacgc
     2701 gctcgcgata ggcgatggca tccttggtgg tgatgaccgg cggcaccaag ttgggcatca
     2761 ggatggcgcg gccgaaatgt ctggccgtga acggcatgac cgcttttagc atcgcgccgt
     2821 cgcgcacatg caggtgccaa tcgtcgggct tgcggatggt aatgcgcgcg gtcatggctg
     2881 atgcctttgg gccggtcgag cgagccgtga cgtcactacc cgatcggcgc tgcggccgca
     2941 gcgtaggtct cgcgcggcgc ttcgtcgatc atggcgccgg tgaggtcggc gacgcgggca
     3001 aaacctcgcc tgccgcacca ctcttctaaa ccctcgatga tcgcgatgat gcccgaggga
     3061 ttgcggaaaa taaggtagcc gatcatgacc gcgctggcac cggcaagcat gtattcgacc
     3121 acgtcctcga tcttgacgat gccgccgcaa ccgatgatcg gaatcttcac cgccttggcg
     3181 cactgataca ccatgcgcac gatgatcggc ttgatgccgg ggccggagag gccgccgaat
     3241 ttgttgccga tcgcggggcg gaaggtattc acgtcgatct tgaggccgag aatcgtattc
     3301 gagacgacga gcgcgtcggc tcccgccgct tccgccgctc tggcaatggc gacgacgtcg
     3361 ccggcattgg gcgagagctt gcaccagatc ggcttgtccg tcgtcgcgcg gatgcggcgc
     3421 atgacgttga aggtgtgctc ctcgtgcagc gcgaaattgc cgcctttggg gtcacgcgta
     3481 gggcacgaga tattgacctc caggacatcg atttcggacg gactgacgtc gcgcgccatc
     3541 gcctcgaaat cctcgatcgt cgttgccgaa atcgagccga cgagtggcgg cgaaaagcgc
     3601 ttgtactccg gcacctgatg gctgaggaaa taatcgatgc ccttggttgg caggccgatc
     3661 gagttgatca tgccgccttc gacctccgac acgcgcggcg gcgggttgcc ggcgcgaaat
     3721 tcgcgcgaca ccgtctttgc gaccagcgcg ccgagccggt tcaggtcgat gacctgcgca
     3781 agatcggtcg agaagcagcc cgacgccggc atgatcggat tcttgagcgt cacgctcccg
     3841 atcttcacgc tcatgtctac catccgaccg cctcctgtag atcgaacacc ggcccttcga
     3901 tgcacacgcg ccgaagctcc ttcttgcctt cgacctcgaa ggtgcgcaca cacacgtagc
     3961 aggggccgag cccgcaagcc atcacctgtt ccatggcgac ctggccgaga atgccgtgcg
     4021 tcttgccgag gcgcttcatc aattgaaaga gacgatttga gccgcaggta tagaaggcgt
     4081 cggctctgcg ctgcgcgatc aggcgtttga gaattgtttc gacgtgctcg accgcgctcg
     4141 acccgtcgct gtcaaggacg gcgatgacct cgccaacctt ggcgaagagg tcgtcggcca
     4201 tgacgaattc ggcgctgcgc gcgcttagga tcgcagtgac gccgatgccg gattctccgg
     4261 cgagctgcga gatcggcgcc aaggtggcaa gcccgacgcc gcgcccgagg acaacgatgt
     4321 gcttgcaggc tggatcaatc gtaaatccga ccccgagcgg tccgaccatg ttgagctcgt
     4381 cgccgacttc cagcgtcgca aggccgtaag tgccgcggcc cacgcatttg tagagaaact
     4441 cgacgcgacg gttctgcggg tcgatgcgat aaacgctctg cgggcgccgc agccacagct
     4501 cgccggcatc cggggagggg cagagcagat tgaagaactg gccgggcttg accgcgagcg
     4561 ccttgggcga ggcgtcgacg acaaggtgct tgtattcgga attgacccag tcgtgggaga
     4621 cgaccgggca cagcgattcc tcggccggga tgtgatgctc ggcaggtgcg ggcgcgctct
     4681 tgcccaccac gtaaggtgcc gatgcgaacg gccggtgcgc catatcgaag tcccgcctcg
     4741 cagaagcctt gatatggtcg ctagctactc cgcggtccct gccaaaatca agatttttcg
     4801 gtcagctcct tggcgcggca ctcgattgcg attgcggcgc ctcggcctgc agccgctttg
     4861 ccgcgtcgag cgtcgcaacg acgatgttct gataccccgt gcaacggcac aggttgccgg
     4921 aaatggcgat ccgaacctct tgctcgctgg ggtctggatt gtcgcgcagg aattcgatga
     4981 gggtcgttag aatgcccggg gtgcaaaagc cgcactgcag tccatgatgt tcatggaacg
     5041 cctgctgcag cggatgcagc ttatccgggg agggggcaat gccctcgacg gtgagaatat
     5101 cgtggccatc cgcctgcact gcgagcatca ggcacgagcg tgcggagcga tcgtcgaaca
     5161 ggatggtgca agcgccgcag acgccgtgct cgcaacccag atgcgtgccg gtgaggccga
     5221 gttgatggcg gatgaaatcc gccagcgtga cgcggacctc gacctcctcc tcgtagcgct
     5281 tgccgttgac tgtcacggcg atttttcgcg tttctttcat tgtcgctcct agtgcggacc
     5341 cccgccgtgg gcctcgagta ggcgcgcgtg cgccttctcc agcgcccggc gcgacagcac
     5401 cgccgccaaa tgctggcgat acgacgccgg cgcatgcaca tcgtcgatgg cctcgagctt
     5461 gcggcagctt tcgcacgcgt cacggaacaa cgtgcccgcc ggcacctgtc cgacgatagc
     5521 ctcctcaacc tcgcgggcac gccgcggtac cgtccccatg ccgccgatgg tcacggaggc
     5581 gcgcgtgacc ttgccgccgg catcgccctc gagcaacacg gcggccgagg tgatggcgaa
     5641 atcgccgtgc cggcgggaaa actcgacgaa ggcatagccg tgcttggccg cccactgcgg
     5701 gaagcgcacg ccgacgacga gttcgttcgc ttcgatcgcc ggggtcatat aggcgaccgg
     5761 aaactcggcg aacgccacct cgcgttggcc agtgggaccg gcgacggtga cggttgcgtc
     5821 atagccggtc gcgagcgaga ccagttccgc cgccggatcg agatggcaca gcgagccgcc
     5881 gatggtgccg cggttgcggg tctgccggtg tccgacctgc agtagggcct cgtgcatgat
     5941 cggccagcgc gcgcgcaccg cctcggaaaa ttcgaggtcg cgctggcgcg tcatagcgcc
     6001 gatgtcgagc gcgccttgcg tgtcgcggat gtaggagagg ccctcgaccc gattgagatc
     6061 gatgatgtga tcgggcagca cgaagcgcat gttgagcatg ggcatcaacg actggccgcc
     6121 ggcgaggagc ttggcgtttt ccaggctggc gagcagcccg accgcctcgc tgacggtttt
     6181 cggatcgtga tagcgaaagg gtggcggctt catcgctggc gtactgaacc ccgtggaggc
     6241 acttctttac atacactatc aactgtgcct caatccaaaa aatcatttga atatggacgc
     6301 gcggtgatcg ttctgcctgt cttcgcgatg caccgtaacc gcggcggcga acgatgaagc
     6361 cagcgcggtt ccgctatcac gcacccaaga cgattgaaga ggcagtcgac accctggccg
     6421 aggtcgcggg cgaagacggg cgcgtgcttg ccggcggcca aagcctggtg ccgatcatgg
     6481 cgtttcgtct ggcgtgcccg gcgcatctcg tcgacatcaa cgatgtcgag gcgctgcggc
     6541 gactgacggt cgaggggcag cggctttgca tcggcgcatg cgtgcgccat gccgccttcc
     6601 acaccccggt agtggatgga ccgctcgggc ggcttctcgc cacggtggtt cgccacatcg
     6661 cccattatcc gattcgaacc cgcggcacgt tctgcggcag catcgcgcat gccgacccgg
     6721 cggccgaatg gtgcctggtc gctgcggcgc tcggcgcgga aatggtggcg cgacgcgcgg
     6781 ccggcacgcg taccattcca gcgcaggatt tttttcgcgg catcatgacg acggcgctga
     6841 aggaggacga gcttctgatc gaagttcgcc tccccgtcct tcccgccgac acgcgtttcg
     6901 gcttctacga gttcaatcgc cgcgccggcg attttgccct cggcatggcg ctcgtcacgt
     6961 ttcgcttgca agacggggtg atccgcgagc cgcgcgtggc gctgggcggg gtcgaatcgc
     7021 aaccgcgacg gattgccgag gctgagcaac tgctcgccgg acgttcggcc gagcgcgcgg
     7081 ccttcgaggc agcagcggcg gcggtcgcat ccgtggtcga tccgctcgag gacgcggtga
     7141 ccagcgcgac ctaccggcgc gacctctccc gcacggtgac gcgccgggcc ctcgaacggg
     7201 cagccgcatg actgccgagg tcggtgccgg cacagcggcg cagggtcgac cacgtcacga
     7261 gtgcggcggc gaaggcgtat cccccgtgcc ggcggccagc aataaatgga tcggccgatc
     7321 ggtcacgcgg ctcgaggatc cgcccctggt cagggggcgc ggacgcttcg ccgccgacat
     7381 ttcttttgca catcagctgc acatgcggat cgtccgggcg caccatgcac acggcaaaat
     7441 cgtctcgatc gatacatcgg ccgcacgcgc gctgcccggt gtgcttgcgg tgtggaccgc
     7501 agccgatctt gcggaggtgc cgccgatcga tttccgcgac ggacggattc ccgcgttcga
     7561 gccctatcgg cagccggtgc tggcgaccga gaaggtgaga tacgt
//
LOCUS       DATCWM010000656         2321 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_263979, whole genome shotgun sequence.
ACCESSION   DATCWM010000656 DATCWM010000000
VERSION     DATCWM010000656.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2321)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2321)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2321
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_263979"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..833
                     /locus_tag="VIQ50_12860"
     CDS             <1..833
                     /locus_tag="VIQ50_12860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="prephenate/arogenate dehydrogenase family
                     protein"
                     /protein_id="HEY9361321.1"
                     /translation="RRVAELGLADQVVETNAAAAEGADVVIVAVPVGACGAVAAEIAP
                     QLTPGAIVSDVGSVKGAILRDMAPHLPAGVHFVPAHPVAGTENSGPDAGFAELFVDRW
                     CILTPPSGVEAAAVERLAAFWRLLGAKVEIMSAEHHDLVLGITSHLPHLIAYTIVGTA
                     DELSQVTRSEVLQFSAGGFRDFTRIAASDPTMWRDVFLANKEAVLEMLGRFNEDLATL
                     TRAIRRGDGETLFNQFSRTRAIRRAIVDIGQDSEAPDFGRPHPELPHVPLPRPYAAED
                     "
     gene            complement(891..1271)
                     /locus_tag="VIQ50_12865"
     CDS             complement(891..1271)
                     /locus_tag="VIQ50_12865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HEY9361322.1"
                     /translation="MQTDTSRRQSHSLIASDRVEGTPVRRSSGEKIGTIERLMIDKLS
                     GNVAYAVLSFGGFLGMGQKHLPIPWTRLTYDRTLGAYQLDLTEEELKAAPSFTAGEEF
                     DWGDRSREIEIHNYYRVPPYWGAY"
     gene            complement(1374..>2321)
                     /locus_tag="VIQ50_12870"
     CDS             complement(1374..>2321)
                     /locus_tag="VIQ50_12870"
                     /inference="COORDINATES: protein motif:HMM:NF021423.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2125 domain-containing protein"
                     /protein_id="HEY9361323.1"
                     /translation="YPFLLEVRCGDAGLELQGTPTLQFKLPLAVGAVQVYDPKLLIGE
                     FTGPLEVSEVGHEPAAIINWTLGQASVRGLPSDVERASVVLVGPTVRAPRLAGNDPLL
                     SARRLELHARRATGSRPDSPAVEAALRLDAAVAEKLASMFDAAVAEKLGALIAKPIDA
                     DIAGTLRGLDDLSPKPLPAWFKEWQTRGGALEIDKARLAQQDLIAVGAGALKLTERGG
                     LDGTLRVTVVGIEKILKMLDIDRMMTEGQVGATFNALDRLIPGLGGMARQTAAPSLIA
                     ALGERTELEGKPAVAFPIRFADGTVFLGPFQVGVVPPLF"
BASE COUNT          396 a          768 c          742 g          415 t
ORIGIN      
        1 gccggcgagt cgccgagctc ggcctcgccg atcaagtcgt cgaaaccaat gccgcggcgg
       61 cggagggcgc agatgttgtc attgtggcgg ttccggtcgg cgcgtgcggg gcggtggcgg
      121 cggaaatcgc cccgcagctg acgccgggcg cgatcgtctc cgacgtcggt tcggtcaaag
      181 gcgcgatcct gcgcgacatg gcaccccatc tcccggccgg agtccatttc gtgccggctc
      241 atccggtcgc gggcactgag aactcgggtc ccgacgccgg ctttgccgag ctgttcgtcg
      301 atcgctggtg cattctcacc cctccgtcgg gcgtggaggc ggctgcggtc gaacggctcg
      361 cagcgttctg gcgcctactc ggcgcgaagg tcgaaatcat gtcggccgag caccacgatc
      421 tcgtgctcgg catcactagc catttgccgc accttatcgc ctacaccatc gtgggcaccg
      481 ccgatgaact gagccaagtc acgcgttcgg aggtgctgca attctccgcc ggcggctttc
      541 gcgatttcac ccgcatcgcc gcctcggatc cgacgatgtg gcgcgatgtt tttctggcca
      601 acaaggaagc ggtgctggaa atgctcggcc gcttcaatga agatttggcc acactgacac
      661 gcgccatccg acgcggcgac ggcgagacat tgttcaatca gttcagtcgc acgcgcgcga
      721 tccgccgcgc cattgtcgac atcggccagg attcagaggc gcccgacttc ggccggccgc
      781 atcccgagct cccgcacgtt ccgctgccgc gtccatatgc ggcggaagac tgatcggccg
      841 cttgcccggc ttgagcgcgt gccccccaat cttcgatggc ccagcgtcct ctaatacgcg
      901 ccccaatacg gcggcacgcg gtagtagttg tggatctcga tttcgcggct gcggtcgccc
      961 cagtcgaatt cttcaccggc ggtgaacgac ggcgcggcct tgagctcctc ctcggtgaga
     1021 tcgagttggt aggcgccgag cgtgcggtcg taggtaagcc gtgtccacgg aatgggaaga
     1081 tgcttttgcc ccatgccgag aaagccgcca aagctgagca cggcgtaagc gacgttgccg
     1141 ctgagcttat cgatcatgag acgctcgatg gtgccgattt tctcaccgct ggagcggcgc
     1201 accggagtgc cttcgacccg gtcgctggcg atcaagctgt gggattggcg cctcgacgta
     1261 tcggtctgca tggttgcctc catcaggcat cggaccatgc cggcgcttgc gacaaccact
     1321 tgcgccagca ttcgaccaga aaacgctttg aagccggccg ccgttccgat tgatcagaag
     1381 agcggtggca cgacgccgac ctgaaacggc ccgaggaaga ctgtcccgtc cgcaaaccga
     1441 atcggaaacg caaccgccgg cttgccttcg agttcggtcc gctcaccgag cgccgcaatc
     1501 aggctgggcg ccgcagtttg gcgcgccatg cctccaagcc cgggaatcag gcgatcgagc
     1561 gcgttgaaag tcgctccgac ctgtccttcc gtcatcatgc ggtcgatgtc caacatcttg
     1621 aggatctttt cgatcccgac gacggtcacc cgaagggtgc catcgaggcc acctcgctcg
     1681 gtcagcttga gggcaccggc acctaccgcg atcaggtcct gttgcgccaa gcgcgctttg
     1741 tcgatctcga gcgcaccgcc gcgggtctgc cattccttga accacgccgg caaaggcttg
     1801 ggagaaaggt cgtccaggcc gcgcaatgtc ccggcgatat ccgcatcgat cggcttggcg
     1861 atcagcgcac cgagcttctc cgcgacggcg gcgtcgaaca tgctcgcgag cttctcggcg
     1921 acggcggcat cgagccgcaa tgctgcttca accgccggac tatcggggcg ggagccggta
     1981 gcccggcgag catgcaactc cagccgtcgc gcgctgagta gggggtcatt gccggccagc
     2041 ctcggggcgc ggacggtcgg gccaacgagt accaccgacg cacgctccac gtcggacggc
     2101 agaccgcgca cgctggcctg tccgagagtc cagttgatga tggccgcggg ctcatgtccc
     2161 acctcggaaa cttcgagtgg accggtgaat tctccgatca gcagtttcgg gtcatagacc
     2221 tggacggcgc cgacggcgag cgggagcttg aactgcagcg tgggcgtgcc ctggagctcc
     2281 aaaccggcgt caccgcaacg cacctcgagg agaaacggat a
//
LOCUS       DATCWM010000657         4365 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_453116, whole genome shotgun sequence.
ACCESSION   DATCWM010000657 DATCWM010000000
VERSION     DATCWM010000657.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4365)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4365)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4365
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_453116"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..86
                     /locus_tag="VIQ50_12875"
     CDS             <1..86
                     /locus_tag="VIQ50_12875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008874930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ribonuclease activity regulator RraA"
                     /protein_id="HEY9361324.1"
                     /translation="VERGAKLPGLYPMNEETKARYAAWKKR"
     gene            173..982
                     /locus_tag="VIQ50_12880"
     CDS             173..982
                     /locus_tag="VIQ50_12880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008139066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEY9361325.1"
                     /translation="MFFPLSKILGFFAIPSNLVISIGLLGLLLVPTRFARAGRALAFA
                     SLIVLAILGLSPVGNALMIPLEDRFPRWDATRGAPDGIIVLGGAISPDVSAARDEVAL
                     NEAAERLTVAVELARRYPAARIVFSGGSGALIYDEGAEAPFALRMLEGLGIPRARVLL
                     EDRSRNTVENAIFSKALIQPKPGERWLLVTSAHHMPRAIGVFRKMGFSVEPYPVDWRT
                     RGAPDAFRPFATLGDGLRRSDTAVREWVGLAVYWLTGRSSALFPSPTREGR"
     gene            1178..1330
                     /locus_tag="VIQ50_12885"
     CDS             1178..1330
                     /locus_tag="VIQ50_12885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361326.1"
                     /translation="MRIEPAIPWTFPRATPRDRALRWFAAAVTAVVATAAVLGAAMTA
                     VMLGIT"
     gene            1495..2169
                     /locus_tag="VIQ50_12890"
     CDS             1495..2169
                     /locus_tag="VIQ50_12890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HEY9361327.1"
                     /translation="MALKLIIGNKNYSSWSFRPWIAMKVAGIAFEEEVISLEAPDFKA
                     RVSKVSATGKVPALADGSVHVWESLAILEYLAEKCPHAHLWPAVPAARALARAIAAEM
                     HAGFGPLRRHLPMNMWRPVTPRQLTPEVETNVRRIEAIWTDCRRGYGADGGFLFGGFG
                     AADAMYAPVVSRFHTYGVEVGATARAYMDVVMALPAWGEWRAAALAEPWVLAEDEVDW
                     PKVVRV"
     gene            2409..3515
                     /locus_tag="VIQ50_12895"
     CDS             2409..3515
                     /locus_tag="VIQ50_12895"
                     /inference="COORDINATES: protein motif:HMM:NF022100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NEW3 domain-containing protein"
                     /protein_id="HEY9361328.1"
                     /translation="MAEEAKSDVKGVFLLTDYPAITLRPGTTSSVNLKLQNYGLPPER
                     LALSVAGVPSGWTATLIGGGQPVAAALAATNSNVPLELRLDVPKDAPVGTTNLTVSAR
                     GATNNASLPIEVKLATDLPAKLTLNPQLPELRGTSKSSFEFQLAIKNDSPKKVLVSLS
                     AQAPQNFDATFTEQYGSQELNALPLDPGQSKDVKLKVRPPNTVAAGKYKVAAKVSADD
                     ATATSDLALDITGQPKIDIAGREGVLSAKASAGQEASIPVILTNSGTAAAEQIELSGS
                     APTGWKVSFEPKTVDRIAPNETKEVQALVTPAAKAVAGDYVTTVRANARGESAAQTFR
                     IAVTTSTIWGIVGIALIGGALLVMIGAVVWFGRR"
     gene            3512..>4365
                     /locus_tag="VIQ50_12900"
     CDS             3512..>4365
                     /locus_tag="VIQ50_12900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9361329.1"
                     /translation="MSANVIEVKNLTKRYNGVTAVNGISFSVARGEIFGLLGPNGAGK
                     TTTILMLLGLSDISDGQARVLDHDPAREPLAVKRQVGYLPDQVGFYDNLTAAENLRYT
                     ARLMGLERSEREQRIKSSLGHVGLVDVADKRVATFSRGMRQRLGLAEILMKEAQIAIL
                     DEPTSGLDPQATVELLNIIRDLKNRGVSVLLSSHLLERVQSVCDRVALFSQGNIALIG
                     TVAELGRQVLGGGFRVEVEAEGQGLTERIAAIPGVQRVERGDGNRLLLLADHDVRPEA
                     AAAVVAAGG"
BASE COUNT          734 a         1413 c         1426 g          792 t
ORIGIN      
        1 aggtcgagcg cggggcgaag ctccccggcc tctatcccat gaacgaggag accaaggcgc
       61 gctacgcggc gtggaagaag aggtgatccg gtcgttgcgc gcgcgggcga tcgtgcatca
      121 gcacaagagc ccggattgcc gtcactggat gtgatgtaac gcgtccgccg cgatgttctt
      181 ccctctctcc aaaatcctcg gcttcttcgc catcccttcc aacctggtga tttccattgg
      241 cctcctcggt cttttgttgg tgccgacgcg ctttgcccgc gccggacggg cgctcgcctt
      301 cgccagcctg attgtgctcg cgatcctcgg cctctcgccc gtgggcaatg cattgatgat
      361 cccgctcgag gaccgcttcc cgcgctggga cgcaacgcgc ggagcccccg acggcatcat
      421 cgtgctgggc ggcgcgatct cgcccgacgt ttcggctgcc cgcgacgagg tggcgctcaa
      481 cgaggcggcc gaacggctta ccgtggcggt cgagctggcg cggcgctatc cggccgcccg
      541 catagtgttt tcaggcggca gcggtgcgct gatctatgac gagggggcgg aggccccctt
      601 cgcgctccgt atgcttgaag gcctgggcat cccccgcgcg cgcgttctgt tggaggatcg
      661 ctctcgcaac acggtggaga atgcgatttt ttccaaggcg ctcatccaac ccaagcccgg
      721 cgagcgctgg ctgctggtga cgtcggccca tcatatgccg cgggcgatcg gcgtgttccg
      781 caaaatggga ttttcggtcg agccttaccc ggtcgattgg cgcacgcgtg gagcccccga
      841 cgcgtttcgt ccgtttgcaa ccttgggcga tgggctgcga cgaagcgaca ccgcggtgcg
      901 cgaatgggtc gggcttgcgg tctattggct gaccgggcgc agttcggcgt tatttccaag
      961 cccgacacga gagggccgct aagagtcgcc gtcgaatcga gcggcgaccg tttacgccgc
     1021 gttcaccagt cgcgggcaag atgcgtgcgt ggcccgacac gactttgtta cggcgtcttt
     1081 gcgcaaccgc tttaactggc caccggtttg agtcgcgagc tgtttgaccc gtggcgcgga
     1141 tgtttctgcg cccaaggcct gggtaggagc atcgacgatg cgcatcgagc cagcaattcc
     1201 ctggactttt ccgcgcgcga ccccgcgtga ccgtgccctg cgatggtttg ccgccgcggt
     1261 gacagcggtc gtcgcgacag ccgccgttct gggcgcggcc atgacggccg tgatgctggg
     1321 gatcacctga cccgccgtaa ctccgagcgg gtgctgacgt cgccggggag cgaattccgt
     1381 atcgcccgtt gggtcgcctc cgagcgcgcg ccacggcgcg ttgccgcttg accgccgccg
     1441 ccggctcccc tcaccatcgc cccataccgc acaacaactg cgcgagggcg gcgcatggcg
     1501 ctcaagctca tcatcggcaa caagaactat tcctcctggt cgtttcggcc atggatcgcc
     1561 atgaaggtcg cgggaattgc tttcgaggaa gaggtgatct cgctcgaggc cccggatttc
     1621 aaggcgcgcg tgagcaaagt ttccgcgacc gggaaggtcc cggcgctcgc cgacggaagc
     1681 gtgcacgtgt gggagtcatt ggcaatcctc gaatatctcg ccgagaaatg tccccatgcc
     1741 catctctggc ccgccgttcc ggcggcgcgc gcgctggccc gcgcgattgc ggccgaaatg
     1801 cacgcgggat ttggtccatt gcgccgccat ttgcccatga acatgtggcg gccagtgacg
     1861 ccgcggcaac ttacccctga ggtcgaaacg aatgtccgcc gcatcgaggc gatctggacc
     1921 gattgccgca ggggctatgg tgccgacggc gggtttctgt tcggcggctt cggcgccgcg
     1981 gatgcgatgt atgcgcccgt tgtctctcgc ttccacacct atggggtgga ggtcggggct
     2041 acggctcgcg cgtatatgga tgtggtaatg gcgctgccgg cctggggcga atggcgcgcg
     2101 gctgcgctcg cggagccctg ggtgctggcg gaggacgagg tggactggcc aaaggtcgtg
     2161 cgagtatgac cggccgtgtt cccgcctgcg acatcccgcc aaaaaaatgt cgaggaaacg
     2221 tattgattcc ggggcgggga cgacacaaaa ccacgccgaa cctgtagcac cgtcctgccc
     2281 cggtgccgcc tggaaaggcc atctcaacag cgggactacc tgcctcaccg tttggagttg
     2341 tgatcatgcg atatcgtctt atcgctttat tttcggctgt tctttcggcc gctttctgca
     2401 tcgcagcaat ggcggaagaa gccaagagcg atgtcaaagg ggtgttcctt ctcaccgact
     2461 accctgccat cacgctgcgg ccggggacca cgtcctcggt caatctcaag ctgcagaact
     2521 acggcttgcc gccggagcgt ctggcgctct cggttgccgg cgtgccgtcg ggatggacgg
     2581 cgacgctcat cggcggcggc cagcccgtgg cggcggcgct cgccgcgacc aattccaacg
     2641 tgccgctcga gctgcgcctc gacgtcccca aggacgctcc ggtcggcacc accaacctga
     2701 cggtgagcgc gcggggcgcg accaacaacg ccagccttcc catcgaggtg aagcttgcga
     2761 ccgatctgcc cgccaagctc acgctcaacc cgcagctccc cgagctgcgc ggcacctcga
     2821 aatcgagctt cgagttccag cttgcgatca agaacgacag ccccaagaag gtgctggtga
     2881 gtttgtccgc gcaagcgccc cagaacttcg acgccacttt caccgagcaa tacggcagcc
     2941 aggaactcaa tgcccttccg ctcgatcctg gacagtcgaa ggacgtgaag ctcaaggtgc
     3001 gcccgccgaa cacggtcgcg gccggcaaat acaaggtggc ggcgaaagta tccgcggatg
     3061 acgcgaccgc cacttccgac ctcgcgctcg acattaccgg tcagccgaag atcgacatcg
     3121 ccggccgcga aggtgtgctc agcgccaagg cctccgccgg ccaggaagca tcgatcccgg
     3181 tgatcttgac caattccggg accgcggcgg ccgagcagat cgagttatca gggagcgctc
     3241 cgaccggctg gaaggtcagc ttcgagccga agacggttga tcgcatcgcc cccaacgaaa
     3301 ccaaggaggt gcaggcgctc gttactccgg ccgccaaggc ggtggccggc gactacgtca
     3361 ccacggtgcg cgccaatgcg cgcggggaat cggccgcgca aactttccgc attgcggtca
     3421 ccacctccac gatttggggc atcgtcggga ttgcgctcat cggcggcgcg ttgctggtca
     3481 tgatcggcgc ggtggtatgg tttggacgac gatgagcgcc aacgtcatcg aggttaaaaa
     3541 cctcaccaag cgctacaacg gagtgaccgc cgtcaatggc atttcgtttt cggtggcgcg
     3601 cggcgagatc tttgggctgc tcggtcccaa cggagccggc aagacgacca ccatcttgat
     3661 gttgctcggc ttgagcgaca tctccgacgg gcaggcgcgc gtgctcgatc acgatcccgc
     3721 gcgcgaacca ttggcggtga aacgccaggt gggttacttg cccgaccagg tgggcttcta
     3781 cgacaatctc accgcggcgg aaaatttgcg ctacaccgcc cgcttgatgg ggctcgaacg
     3841 cagcgagcgc gagcagcgga tcaaatcctc gctcggccat gtaggactag tcgacgtggc
     3901 tgacaaacgc gtagccacct tctcgcgcgg catgcgccag cggctcgggc ttgccgaaat
     3961 cctgatgaaa gaggcgcaga tcgctatcct cgacgagccg acctccggcc tcgatccgca
     4021 ggcgaccgtc gagttgctca atatcatccg cgatctcaag aaccgcggcg tgagtgtatt
     4081 gctgtcctcg cacctgctcg aaagggtgca aagcgtctgc gatcgcgtcg ccctcttcag
     4141 tcaggggaac atcgcgctca tcggcaccgt ggcagagttg ggccggcagg tgctcggtgg
     4201 cggcttccgc gtggaggtcg aagccgaagg gcagggactg accgagcgga tcgccgcgat
     4261 ccccggcgtg cagcgggtcg agcgggggga cggcaaccgg cttttgctgt tggctgatca
     4321 cgatgtccgc ccggaagccg cggcggcggt ggtcgcggcc ggcgg
//
LOCUS       DATCWM010000658         2803 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_328961, whole genome shotgun sequence.
ACCESSION   DATCWM010000658 DATCWM010000000
VERSION     DATCWM010000658.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2803)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2803)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2803
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_328961"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(54..386)
                     /gene="cutA"
                     /locus_tag="VIQ50_12905"
     CDS             complement(54..386)
                     /gene="cutA"
                     /locus_tag="VIQ50_12905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010038 - response to metal ion [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="divalent-cation tolerance protein CutA"
                     /protein_id="HEY9361330.1"
                     /translation="MERAVFVYTTYPSVVEAERAGRALVEQRLCACVNILPGMISHYW
                     WQGVLERGEETVMIIKTRSSLTGPVSTAVKEMHSYATPAILVIPIESVDRDYLDWLMA
                     ETAPAAKA"
     gene            473..1255
                     /locus_tag="VIQ50_12910"
     CDS             473..1255
                     /locus_tag="VIQ50_12910"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019674 - NAD metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD kinase"
                     /protein_id="HEY9361331.1"
                     /translation="MSPATPKFERIAFVASPIPEAREAFEQLTARYGNVPAEAADVIV
                     ALGGDGLMLQTLHRFMITGKPIYGMHRGTVGFLMNEFHTDQLPERLAKARVTVIHPLL
                     MCAQDKQGDTVEFHAFNDVFLYRQTYQAARLRILIDGEERLSELVADGVLVATPAGST
                     AYNLSVQGPIIPISAPLMALTPISPFRPRRWRGALLPDSARVRADVLEPEKRPVAAVA
                     DHDEVRSVCSVDIHMDHSISMQMLFDPGHSLDERILREQFGY"
     gene            1364..1675
                     /locus_tag="VIQ50_12915"
     CDS             1364..1675
                     /locus_tag="VIQ50_12915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyU family transcriptional regulator"
                     /protein_id="HEY9361332.1"
                     /translation="MFSKLKAAWNRLAGGQGLGEADAPAVPAVEYKGYRIRATPYRNN
                     GGYQTAGIIEKDTPEGVKEHRFIRADTHQGREDAIAFAISKAKQIIDLQGDRIFVQAN
                     G"
     gene            1737..2225
                     /locus_tag="VIQ50_12920"
     CDS             1737..2225
                     /locus_tag="VIQ50_12920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEY9361333.1"
                     /translation="MAQDTELRRHKRGGLYFDDFVVGHLYEHPLTRTVTQMDNMLFSN
                     MTLNPQPLHIDRHFCEQETEWGQPLMNSLFTLGLMIGIMVNHLTVGTTIANLGMTEVK
                     FPHPLFEGDTVHVTTEVISKRESTSRPGAGIVEFHHRAYNQDNKLVAECRRQVFMRMR
                     PR"
     gene            2186..>2803
                     /locus_tag="VIQ50_12925"
     CDS             2186..>2803
                     /locus_tag="VIQ50_12925"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEY9361334.1"
                     /translation="MPAPSVHAHAAALMRSLLFVPADDAKKLDKAMASGADALIVDLE
                     DSIPTQGKADARLSAAAFIAEAGKAEHRPRLLVRVNGFASGLCDGDLDAVVPAGPDAI
                     MLPKAQGGADVLRTDAKLSAREAIAGLPDGCVKIVAIATETAAALFLAGTYGGASGRL
                     EGLTWGAEDLSAELGAEANRDGEGRFLDPYRLARALCLAAAAAARV"
BASE COUNT          521 a          922 c          889 g          471 t
ORIGIN      
        1 gagccgaagt ttgcgcacgc cttcgttcgg gtcgcccgcc agttgtcgcg aagtcatgcc
       61 tttgccgcgg gcgcggtctc ggccatgagc cagtcgagat aatcgcggtc cacgctctcg
      121 atcgggatta ccaggatcgc aggcgtggca tacgagtgca tctccttcac cgccgtactg
      181 accggcccgg taagggagct gcgagttttg ataatcatca ccgtctcctc cccgcgctcg
      241 agcacgccct gccaccagta gtgcgagatc attccgggca ggatgttgac gcacgcgcac
      301 aggcgctgct cgacgagtgc gcgtcccgct cgctccgcct cgacaacgga cggataggtc
      361 gtatagacga agaccgcgcg ctccatgctg atccccttgc gcctgcgggc gcgcccgccc
      421 accgcctgcg cctcgatagc gaggcggcaa tactccaacg acgaggcctg cgatgagccc
      481 cgcgacccca aagttcgagc ggatagcttt cgtcgcgagc cccattcccg aggcgcgcga
      541 ggcgttcgag cagctcaccg cccgctatgg caatgtcccg gccgaggctg ccgacgtcat
      601 cgtcgcgctc ggcggcgacg gactcatgct gcaaaccctg caccggttca tgatcacggg
      661 caagccgatc tacggcatgc accgcggcac tgtcggattt ctgatgaacg agtttcacac
      721 cgatcaactg ccggagcgcc tcgccaaggc ccgcgtaacg gtgatccatc cgctgctcat
      781 gtgcgcccaa gacaagcaag gcgatacggt cgagttccat gcgttcaacg atgtgttcct
      841 ctatcgccag acgtatcagg cggcgcgact gcgcatcctg atcgacggcg aagagcggct
      901 cagcgaattg gtggccgacg gcgtgctggt ggccacgccc gccgggtcga ccgcgtacaa
      961 cctctcggtt caagggccga tcattccgat cagcgcgccg ctgatggcat tgacgccgat
     1021 cagcccattc cggccgcggc gttggcgcgg ggcgcttttg cccgacagcg cgcgcgtgcg
     1081 cgccgacgtg ctcgagccgg agaagcggcc ggtggccgcg gtggccgatc atgacgaggt
     1141 tcgttcggtc tgttcggtcg acattcacat ggatcacagc atctccatgc agatgctgtt
     1201 cgatccaggc cacagcctcg acgagcggat tctacgcgag cagttcggat actgaaaagg
     1261 tgctgcattc gcgggccaag cgccgaggcg gtcgacaggc agtggcaagc gcgcaataat
     1321 cgacgtgtga tcccggtacg ggtgccacct ggcagcagca tccatgttct cgaagctcaa
     1381 agcggcctgg aaccggcttg ccggcgggca aggattgggc gaggcggacg cgccggcggt
     1441 gccggcggtc gaatacaaag gctaccgcat tcgtgcgaca ccgtaccgga acaacggcgg
     1501 ctaccagacc gccgggatca tcgagaagga cacccccgaa ggcgtgaaag agcatcgctt
     1561 catccgggcc gatacccatc aaggccggga agacgcgatc gccttcgcga tctccaaggc
     1621 caagcagatc atcgacctgc aaggcgaccg catctttgtg caagccaacg gctgatattt
     1681 cgaaccgtgg tgctcaaacg cagcgcatga actcgcgcta gtcccggagg aaggcgatgg
     1741 ctcaggatac cgagctgcgc cgccacaaac gcggcggcct ctatttcgac gatttcgtgg
     1801 tcggccacct ctatgagcac ccgctcacgc gcacggtcac acagatggac aacatgttgt
     1861 tctccaacat gacgttgaat ccgcagccgc tgcacatcga tcgccatttc tgcgagcagg
     1921 aaaccgagtg gggccaaccg ctgatgaact cgctgttcac gctcgggctg atgatcggca
     1981 tcatggtcaa ccatctcacc gtggggacga cgatcgccaa tctcggcatg accgaggtga
     2041 agttccctca cccgctgttc gagggcgaca cggtgcatgt caccaccgag gtgatcagca
     2101 agcgcgaatc cacgtcgcga ccgggcgcgg gcatcgtcga gtttcatcac cgcgcgtaca
     2161 atcaggacaa caagctggtc gccgaatgcc ggcgccaagt gttcatgcgc atgcggccgc
     2221 gctgatgcga tccctgctgt tcgttccggc cgatgacgca aaaaagctcg acaaggcaat
     2281 ggcgagcggc gccgacgcgc tgatcgtcga tctcgaagac tcaattccca cgcaaggtaa
     2341 ggccgacgca cggctgagcg ccgcggcgtt catcgcggaa gccggcaaag ctgagcaccg
     2401 ccctcgcctg ctggttcgcg tcaatggatt tgcaagcggc ctttgcgacg gcgacctcga
     2461 tgccgtcgtg ccggcgggtc ccgatgccat catgctgccg aaggcgcagg gcggcgccga
     2521 cgtgcttcgg accgacgcca agctctcggc gcgcgaggcg atcgccgggt tgcccgatgg
     2581 ttgcgtcaag atcgtcgcga tcgcgacgga aacggcggcc gcgttgtttc tcgccggcac
     2641 atatggcggg gcgagcggac ggctcgaggg gttgacctgg ggcgccgaag acctttcagc
     2701 cgagctcggc gccgaggcaa atcgcgacgg cgagggccgc ttcctcgatc cctaccgact
     2761 cgcccgcgcg ctctgccttg ccgccgcggc ggccgcgcgg gtg
//
LOCUS       DATCWM010000659         2176 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_501534, whole genome shotgun sequence.
ACCESSION   DATCWM010000659 DATCWM010000000
VERSION     DATCWM010000659.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2176)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2176)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2176
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_501534"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..638)
                     /locus_tag="VIQ50_12930"
     CDS             complement(<1..638)
                     /locus_tag="VIQ50_12930"
                     /inference="COORDINATES: protein motif:HMM:TIGR02601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter-associated beta strand
                     repeat-containing protein"
                     /protein_id="HEY9361335.1"
                     /translation="MPPSTMPSSGGTAGTVTINAPVTAHNLTFNTSGYTVARTLANTL
                     TLAGATPTISMASGISATVSSVIAGTAGLTKAGLGTLTVSGANTYTGATNVNAGTLQA
                     GATNTFAPTSAFTIASGATLALNNFNETIGSLAGAGTVTNGGAANRTLTTGGDNTSTA
                     FSGVIQDGAAGATNLTKAGTGTFTLSGANTYTGTTTISAGTLQIGNGGTTGT"
     gene            complement(1287..>2176)
                     /locus_tag="VIQ50_12935"
     CDS             complement(1287..>2176)
                     /locus_tag="VIQ50_12935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004109138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FumA C-terminus/TtdB family hydratase beta
                     subunit"
                     /protein_id="HEY9361336.1"
                     /translation="LASCRYLDDLPTHGSEAGHAFRDLEMEKEVHRLTQSLGVGAQFG
                     GKYFCHDVRVIRLPRHGASLPIGLGVSCAADRQALGKITREGIYLEELERNPAKYLPE
                     VDAAKLGGEVVHIDLRRPMKEILAELSKYPIKTRLSLSGPMIVARDLAHGKLRERLER
                     GQGLPDYFKNHPVYYAGPAKTPQGYASGAFGPTTAGRMDSFVQDFQAAGGSMIMLAKG
                     NRSSAVREACKTHGGFYLASIGGAAANLAEHCIKKVETVEYPELGMEAVWKIEVENFP
                     AFIVIDDKGNDFFQDLNLG"
BASE COUNT          386 a          680 c          701 g          409 t
ORIGIN      
        1 atggtgccgg tggtgccgcc gttgccgatc tgcagcgtcc cggcgctgat tgtggtggtg
       61 ccggtataag tgttggcacc tgacagcgtg aatgtgccgg tgcccgcctt ggtcagattg
      121 gtcgcgcctg ccgcgccatc ctggatcacg ccggagaacg ccgtcgacgt gttgtcgccg
      181 ccggtcgtga gggtcctgtt ggcggcgccc ccattggtca cggtgccggc gccggcgagc
      241 gagccgatgg tctcattgaa gttgttgagg gcaagggtgg cgccggaggc gatcgtgaag
      301 gcgctggtcg gcgcgaaggt atttgtggcg ccggcctgca gcgtgccggc attgacgttg
      361 gtcgcgcccg tgtaggtgtt ggcgccgctg acggtcagcg tgccgagccc agccttcgtc
      421 aagcccgccg tgccggcgat gaccgaactg acggtcgcgc taatccccga cgccatgcta
      481 atggtgggag tggcaccggc cagcgtcagg gtgttggcga gcgtccgggc gaccgtatag
      541 ccgctggtat tgaaggtgag attatgcgcg gtgaccgggg cgttgatggt taccgtgccg
      601 gccgtccccc ccgaagatgg cattgtcgag ggtggcattg ttccaagtct gaaaggtgct
      661 cccattgaac cagagcgcag gagccgaggt gttccagttg cctgtgccac cgccgcccgg
      721 agtgacgccg ttggcgctcc actgcaagtc ggccgcattg gcgccgacgc tccacgctaa
      781 ggctagagct atggccgccg ttccaagcag gagacgtcgg gcggtatctg caaacaccac
      841 acaaaacacg acaggcagtg cagcacaaaa ggcgctgacc ataggctctt gcctccgcgc
      901 aatcatgcgg cggccttcgc cttcatcgac caaaaagggg atctgcaaga cacgcgtgtt
      961 gcgaacaggc ccccgcaccc gggcaagcgg cggcgctccg gagtgatacg cctttccggg
     1021 tccttatcgt tccagagaat tcgggattcg aatgttcgat attatacgca cccagctcgc
     1081 ggagcgacaa aacatccgat gtgttacaaa tttatcgcag ttcatcgatg cgaacttcgc
     1141 aaagcaaagc tacccagaca aagcaattac tttgttcccc cagcgaaacc ccggctgtca
     1201 gcggagcgtg tcgcgcgata gcgagattgc gcagcccctc atccattgga aaatcgtgga
     1261 gccttcccct ctgccgccac gagagctcac cccaaattca ggtcctggaa aaagtcgttg
     1321 cccttgtcgt cgatcacgat gaaggcggga aaattctcca cctcgatttt ccacaccgcc
     1381 tccatgccga gctcgggata ctccaccgtc tcgaccttct tgatgcagtg ttcggcgaga
     1441 ttggccgcgg cgccgccgat cgaggcgaga tagaaaccgc cgtgcgtctt gcacgcttcc
     1501 cgcaccgccg acgaccggtt gcccttggcc agcatgatca tcgagccgcc ggccgcctgg
     1561 aaatcctgca cgaacgaatc catgcgtccc gccgtggtcg ggccgaacgc gcccgaggcg
     1621 tagccctgcg gcgtcttggc cgggccggcg taatagaccg gatggttttt gaaataatcc
     1681 ggcagcccct gcccgcgttc cagccgttcg cgcagtttgc catgcgccag gtcgcgcgcc
     1741 acgatcatgg gtccgctgag cgaaagccgc gtcttgatcg gatatttgga aagctcggcg
     1801 aggatttcct tcatcggccg gcgcagatcg atgtgcacga cctcgccgcc gagcttggcg
     1861 gcatcgacct cgggcaaata tttcgccggg ttgcgctcga gctcctcaag atagatgccc
     1921 tcgcgcgtga tcttgccgag tgcctggcgg tcggccgcgc atgagacgcc gagcccgatc
     1981 gggagggaag cgccgtgacg cggcaggcgg atcacgcgca cgtcgtggca gaaatatttg
     2041 ccgccgaact gcgcgcccac gccgagcgac tgtgtgagcc gatgcacctc cttttccatc
     2101 tcgaggtcgc ggaaggcgtg cccggcctcc gagccgtgcg tcggaaggtc gtcgagatag
     2161 cggcaggagg cgagct
//
LOCUS       DATCWM010000660         4341 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_518009, whole genome shotgun sequence.
ACCESSION   DATCWM010000660 DATCWM010000000
VERSION     DATCWM010000660.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4341)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4341)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4341
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_518009"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..236)
                     /locus_tag="VIQ50_12940"
     CDS             complement(<1..236)
                     /locus_tag="VIQ50_12940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-(5'-phosphoribosyl)anthranilate isomerase"
                     /protein_id="HEY9361337.1"
                     /translation="MSVLIKICGLKSFEALDVALEAGADLVGFVFFSPSPRHVGPQAA
                     RALCERVRGRAQKVALSVDATDDELTASIEGLKP"
     gene            complement(329..706)
                     /locus_tag="VIQ50_12945"
     CDS             complement(329..706)
                     /locus_tag="VIQ50_12945"
                     /inference="COORDINATES: protein motif:HMM:NF018058.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapA
                     domain-containing protein"
                     /protein_id="HEY9361338.1"
                     /translation="MIRRIAAALILVPLAILLVSLAVANRQSVVISFDPFDPAHPAVT
                     QALPLYLLMLMILIGGVLLGGSAAWIKQAKWRRAARLADAQRRELRAEVDRLRRRLGS
                     PAVAPQTAPAEVGPRLTIPPPAA"
     gene            complement(711..998)
                     /gene="ihfB"
                     /locus_tag="VIQ50_12950"
     CDS             complement(711..998)
                     /gene="ihfB"
                     /locus_tag="VIQ50_12950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006417 - regulation of translation
                     [Evidence IEA];
                     GO_process: GO:0075713 - establishment of integrated
                     proviral latency [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HEY9361339.1"
                     /translation="MIKSELVQRISAQNPHLYQRDVENIVNAILGEIIAAMARGDRVE
                     LRGFGAFSVKNRPARTGRNPRTGAHVSVEKKSVPFFKTGKEMRERLNRTNS"
     gene            complement(1040..2026)
                     /gene="sppA"
                     /locus_tag="VIQ50_12955"
     CDS             complement(1040..2026)
                     /gene="sppA"
                     /locus_tag="VIQ50_12955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HEY9361340.1"
                     /translation="MSLDADTIVDRRRMRRKLTFWRVCAIILAIGAVVAAGAALRTPG
                     TEAWVGSPAGSIARITITGLIRNDMQRVEALERLGKSRVQAVIVHINSPGGTTAGSEQ
                     LHDSLMRLKEQKPLVVVVDGLAASGGYITALAADHIIALETSLVGSIGVLFQYPNVSD
                     LLKTLGIKVEEIKSSPLKAAPNGFEPTSPEARAAIEAIVSDSYAWFRGMVKARRHLDD
                     AALERVADGRVFTGRQGIALKLVDEIGDERAALAWLAKEKNIDPKTPVRDYRLRERFS
                     DLPFLHTAMVATLDTVGLGSFARRLEEWGAVQAVERLNLDGLLALWHPPVAN"
     gene            complement(2060..3781)
                     /gene="rpsA"
                     /locus_tag="VIQ50_12960"
     CDS             complement(2060..3781)
                     /gene="rpsA"
                     /locus_tag="VIQ50_12960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HEY9361341.1"
                     /translation="MATAVSSATPSREDFAKLLEESFTQGSPQEGAVVKGTVVAIEKD
                     LAVIDVGAKTEGRVALREFAGPGRQAEIKVGDTVEVYLERVENALGEAVLSRDKARRE
                     ESWGKLEKAFNSNEKVQGVIFNQVKGGFTVDLDGAVAFLPRSQVDIRPIRDVSPLMNQ
                     PQPFQILKMDRRRGNIVVSRRTVLEETRAEQRQELVQNLEEGQVIDGVVKNITDYGAF
                     VDLGGIDGLLHVTDMAWRRVNHPTEVLNIGQQVKVKIIKINHETHRISLGMKQLQDDP
                     WQGIEAKYPVGARFKGRVTNITDYGAFVELEPGIEGLIHVSEMSWTKKNVHPGKIVST
                     SQEVDVQILEVDPVKRRISLGLKQTMRNPWEAFVEKYPPGAVIDGEVKNKTEFGLFLG
                     LDGDVDGMVHLSDLDWKRPGEQVIEEYKKGDRVKAKVLDVDVEKERISLGIKQLADDP
                     METAGDLKKGSVVTCEVTEVKEGGIDVKIVGSDLTTFIKRSELARDRGEQRPERFSVG
                     QKVDARVIQFDRRTHKVQVSIKALEVAEEKEAIAQYGSTDSGATLGDILGTALKRATE
                     KPSEKKE"
     gene            complement(4021..>4341)
                     /locus_tag="VIQ50_12965"
     CDS             complement(4021..>4341)
                     /locus_tag="VIQ50_12965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - cytidylate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HEY9361342.1"
                     /translation="GAVLDGRDIGTVIFPDADVKIFVTASPEVRARRRAAELEQAGGR
                     IDEAEVLADIRRRDERDSTRAVAPLRAAPDAYLLDTTHLDIDAAFRAAIDIVEAVRAG
                     RKRG"
BASE COUNT          745 a         1433 c         1338 g          825 t
ORIGIN      
        1 tcgggcttga gaccctcgat gctcgctgtc agttcatcgt cagtggcgtc gacggaaagc
       61 gccacctttt gcgcccttcc gcggacacgc tcgcaaagcg cgcgcgcggc ctgcgggccg
      121 acgtgacgag gcgagggcga aaagaagaca aagccgacaa gatccgcccc ggcctcgagc
      181 gccacatcga gcgcctcgaa gctcttaagc ccgcagatct tgatcaaaac ggacatcgcc
      241 gcacattccg caccgcgcgg ttctaccgcg gcgatgacgt tttgtctcgc ctctgcatgt
      301 tattgataag tcagtaaaac tcgttcggct acgccgccgg cggggggatg gtgagccgcg
      361 ggccgacctc ggcgggcgcc gtttgagggg cgacggcggg cgatcccaag cgccgcctga
      421 ggcggtccac ctccgcgcgc agctcgcgcc gttgcgcgtc ggcaagacgc gccgcgcgtc
      481 gccacttggc ctgcttgatc caggccgcgc tgcccccgag gaggaccccg ccgatcagaa
      541 tcatcaacat caagaggtag agcggcaatg cctgcgtgac ggcgggatga gccggatcga
      601 agggatcgaa ggagatcacg acgctctgac gattggctac cgccagactg acgaggagga
      661 tagcaagcgg caccaggatc aacgcggcgg caatcctgcg gatcatgagc ttagctgttc
      721 gtgcgattga gtcgctctcg catttccttg ccggtcttaa agaacggcac ggacttcttc
      781 tcgaccgaga catgcgcgcc agtacgcggg ttgcgcccgg tgcgcgccgg gcggttcttg
      841 accgagaagg cgccgaagcc gcgcagttcg acccggtcgc cccgcgccat cgcggcaata
      901 atctcgccga ggatggcgtt gacgatgttc tccacgtcgc gctgataaag atgcgggttc
      961 tgcgcagaga tgcgctgcac gagctcggac ttgatcatcg ctgctgccat ccctggtcct
     1021 atcggacgaa tcgccggttc taattcgcga ctggagggtg ccaaagggcc aagagaccgt
     1081 caagattgag gcgctccacc gcctgcactg cgccccactc ttccagccgc cgcgcgaagg
     1141 agcccagccc gaccgtgtcg agggtggcga ccattgcggt gtgcaggaat ggcaagtcgc
     1201 tgaaccgctc gcgcagacga tagtcgcgca ccggcgtctt cggatcgatg ttcttttcct
     1261 tcgcgagcca cgccagcgcg gccctctcgt cgccgatttc gtcgacgagc ttgagcgcga
     1321 tgccctgccg cccggtaaag acacggccgt cggccacccg ctccaaggcc gcgtcgtcga
     1381 gatggcgccg cgccttcacc atgccgcgga accaagcata ggaatcggag acgatcgcct
     1441 cgatcgcggc gcgcgcctcc ggcgaggtgg gctcgaagcc gttcggtgcc gccttgagtg
     1501 gcgaagattt gatctcttca accttaatgc cgagtgtctt gagaagatcg ctgacattcg
     1561 gatattggaa caatacgccg atcgagccga ccagcgacgt ctcgagcgcg atgatgtgat
     1621 cggccgccag ggccgtgatg tagccgcccg aagccgcaag gccgtcgacg accaccacca
     1681 gcggtttttg ctccttgagg cgcatcaagg agtcgtgcag ctgctccgag ccggccgttg
     1741 tgccgccggg gctgttgatg tgcacgatca ccgcctggac gcgcgatttc ccaagccgct
     1801 ccagcgcctc gacccgctgc atatcattgc ggatgagacc ggtgatggtg atgcgtgcaa
     1861 tggaccctgc cggcgagccg acccatgcct cggtgccggg agtgcgcaag gcggcgccgg
     1921 ccgcgactac cgcgccgatg gcaaggatga tcgcgcagac gcgccagaag gtaagcttgc
     1981 gccgcattcg gcggcgatcg acgatagtgt cggcatcgag cgacatggtg gctcattccc
     2041 ccgcgatgac tcgccggcgc tattcttttt tctcggacgg cttttccgtg gcgcgtttga
     2101 gcgcggtgcc gaggatatcg ccgagcgtcg ctcccgaatc ggtggagccg tattgggcga
     2161 tcgcttcctt ctcctccgcc acttcgagcg ccttaatcga gacctgtacc ttatgggtgc
     2221 ggcggtcgaa ctggataacg cgcgcgtcga ccttctgccc gacggagaaa cgctccggcc
     2281 gctgctcgcc gcggtcgcgt gcgagctcgg atcgtttgat gaaggtcgtg agatcgctgc
     2341 cgacgatttt cacgtcgatg ccgccctctt tcacctccgt cacctcgcaa gttaccaccg
     2401 agcctttctt aagatcgccg gcggtctcca tcggatcgtc cgcaagctgc ttgatgccga
     2461 gcgagatacg ctccttctcc acgtcgacgt cgagcacctt ggctttgacc ctgtcgccct
     2521 tcttgtattc ttcgatcacc tgctcgcccg gccgcttcca atcgaggtcg gagagatgca
     2581 ccataccgtc gacgtccccg tcgaggccga ggaagaggcc gaactcggtc ttgttcttca
     2641 cttccccgtc gatcacggcg ccgggaggat acttctcgac aaaggcctcc cacggattgc
     2701 gcatggtttg cttcagaccg agcgatatgc gccgcttgac cggatcgacc tcgaggatct
     2761 gaacgtccac ctcctgcgag gtcgacacga tcttgccggg atgcacgttc ttcttggtcc
     2821 acgacatctc ggagacgtgg ataaggcctt cgatccccgg ctccagctcc acgaacgcgc
     2881 cgtagtcggt aatgttggta acccgaccct tgaaccgcgc gcccaccggg tatttggcct
     2941 caatgccctg ccagggatca tcctgcagct gcttcatccc gagcgaaatg cggtgggtct
     3001 cgtggttgat cttgatgatc ttgaccttca cctgctggcc gatattgagc acttcggtcg
     3061 ggtggttgac acgccgccac gccatgtcgg tcacgtgcag gagcccgtcg atgccgccga
     3121 gatcgacgaa cgcgccgtag tcggtgatgt tcttgaccac gccgtcgatg acttggccct
     3181 cttccagatt ctgcaccagt tcctggcgct gttcggcgcg cgtctcttcc aagacggtgc
     3241 ggcgcgacac cacaatgttg ccgcggcgac ggtccatttt caggatctgg aaaggttgcg
     3301 gctgattcat cagcggagaa acgtcgcgga tcggccggat atcgacctgg ctgcggggca
     3361 gaaacgccac cgcgccgtcg aggtcgacgg tgaagccgcc cttgacctga ttgaagatga
     3421 cgccctggac cttttcgttg ctgttgaacg ccttttccag cttgccccaa ctctcctcgc
     3481 gtcgcgcctt atcgcgcgag agcacggcct ccccgagcgc gttctccacc cgctcgagat
     3541 aaacttcgac cgtatcgccg accttgatct ccgcctgccg gcccggcccc gcgaactcgc
     3601 gcagcgccac ccgcccctcg gtcttggccc cgacgtcgat gacggcgaga tccttctcga
     3661 tcgcgacgac cgtccccttg accacggcgc cttcctgcgg actgccctgg gtgaaggatt
     3721 cttccagcaa tttcgcgaaa tcttcgcgcg acggcgtggc ggaactgacg gcagtggcca
     3781 tgaacactcc ttaaagctag cgattggcgc cggattatcg ttgctggcgt cttgctcgca
     3841 ggggccgaaa gtccaatgca ccttcggtag ccgccgcaat tgcgatcgcg cgggcctgaa
     3901 ggcttgccca cgtgcgacgg tccgggccga taacccagcg atcaagacga tgattcacgt
     3961 cccgtgcgcc acgaaagaag cagggcggag caggctcatc ctccagtggc gaaaacacgg
     4021 tcagccgcgc ttccggcctg ctcggacggc ttcgacgatg tcgatggcgg cccggaacgc
     4081 ggcgtctata tccaaatgcg tggtgtcgag caagtatgca tccggcgccg ctctcaaagg
     4141 ggctaccgcc cgcgtgctgt cgcgctcgtc acggcgtcgg atgtcggcca agacctcagc
     4201 ctcgtcgatg cggcctccgg cctgctcgag ctcggcggcg cggcggcgcg cgcgcacctc
     4261 cgggctggcg gtgacgaaga tcttcacgtc cgcgtcagga aagatcacgg ttccgatgtc
     4321 gcgaccatcg agcaccgcgc c
//
LOCUS       DATCWM010000661         3378 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_172283, whole genome shotgun sequence.
ACCESSION   DATCWM010000661 DATCWM010000000
VERSION     DATCWM010000661.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3378)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3378)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3378
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_172283"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..605
                     /locus_tag="VIQ50_12970"
     CDS             <1..605
                     /locus_tag="VIQ50_12970"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FCD domain-containing protein"
                     /protein_id="HEY9361343.1"
                     /translation="ELIAATGVSRTVVREAVAALRADGLVFTRQGVGAFVPENARRPL
                     RIDVDPLSPLRAVLEVMELRTGIEIEAAGLAAERASASQLRKIVECLEAVDAALKRGA
                     DAIAQDFALHCSIADATGNPQFRRFLEHLGRFIIPRQTIRGGPGIPKRAYIETFQREH
                     REIVQAIRGGGVLQARAAMRRHLVNSRKRYQRLAANLGSD"
     gene            644..1456
                     /locus_tag="VIQ50_12975"
     CDS             644..1456
                     /locus_tag="VIQ50_12975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007773232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9361344.1"
                     /translation="MQTVLITGAAGGIGTRLCQLLKGVYPNIRLSDVRRPADLAAEET
                     FVQADLANMAEVDKAVAGVEGIVHLGGFSVEGSWDTILQANIIGCYNLFEAARRHRVE
                     RVVFASSNHVIGYYPRQRRIGVDVALRPDSRYGVSKAFGEALGALYAFKHGLRVTCIR
                     IGNFGDAPVDRRRLSIWVAPQDLVQLVRIGLEHPDIRHEIFYGVSDNVRGWWDNAAAF
                     RLGYRPQGRSEEHSAAALAADAKLPPDPVGDWYQGGPFCSDEFSDGIERAPL"
     gene            complement(1475..1834)
                     /locus_tag="VIQ50_12980"
     CDS             complement(1475..1834)
                     /locus_tag="VIQ50_12980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013215731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEY9361345.1"
                     /translation="MSGPKTYTGGCHCGEVRFEVTTDLGKVTTCNCSICQKRGALWSF
                     VPAESFALRAGEEALKDYQFGKKSIHHLFCPQCGVGAFSRGTSPQGDEMVAVNVRCLD
                     EVDVAALAPASFDGRSL"
     gene            complement(1846..2421)
                     /locus_tag="VIQ50_12985"
     CDS             complement(1846..2421)
                     /locus_tag="VIQ50_12985"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEY9361346.1"
                     /translation="MARVRMIKPEEADADTREVYDGVRKQWGRISNFSQVLAHQPAAL
                     AGWMLPNAAIRLDNVKSDPDYVKIQQLVIIKTSALNQSAYCMSHNVPLGRKVGLTEAQ
                     IKAAQSSDYMRSPDLDERQKAAIRWAEAVTLLTARDDENAFAAMRQHFSEKQIVELTV
                     FCGMWNYSNRLCEALHIDLERPDKRIEFQHD"
     gene            complement(2687..2974)
                     /locus_tag="VIQ50_12990"
     CDS             complement(2687..2974)
                     /locus_tag="VIQ50_12990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361347.1"
                     /translation="MRFGTYLALAIAAVVGACASNPDVIDPIYVSPSTFENLTCRQIG
                     EEQKRITREEAANMKDGKATDAEQVGLLKGAMEALEQVSIEKGCNIEFQHG"
BASE COUNT          548 a         1099 c         1074 g          657 t
ORIGIN      
        1 aggagttgat cgccgcgacc ggcgtgagcc gcaccgtggt gcgggaagcg gtggcggcgc
       61 tgcgggcgga cggcttggtg ttcacgcgcc aaggcgtcgg cgccttcgtc ccggagaacg
      121 cccgccggcc gctgcgcatc gacgtcgatc cgctgtcgcc gttgcgcgcc gtgctcgagg
      181 tgatggagct gcgcaccggc atcgagatcg aagccgcggg gcttgccgcc gagcgcgcct
      241 cggcatcgca gctccgtaag atcgtcgagt gcttggaggc ggtcgacgcc gcgctcaaac
      301 gcggcgcgga cgcgatcgcc caggattttg cgctccattg cagtatcgcc gacgcgaccg
      361 gcaacccgca gttccggcgc tttctcgagc atctcggacg cttcatcatc ccgcggcaga
      421 cgattcgcgg cggaccagga attcccaaac gcgcctacat cgagacattc cagcgcgagc
      481 atcgcgagat cgtgcaagcg atccgtggcg gaggcgtgtt gcaggcgcgc gcggcgatgc
      541 gccggcacct cgtcaacagc cgcaaacgct accagcggct cgccgcaaat ctcggcagcg
      601 attagctggt attcggcgac tctgaatcag cgcgagcgac atcatgcaaa cggttttgat
      661 taccggcgcg gctggcggca tcggcacgcg gctgtgccaa ttgctcaaag gcgtctatcc
      721 caacattcgg ctgagcgacg tcaggcgccc tgccgacctc gcggcggagg agaccttcgt
      781 ccaggccgac ctcgccaata tggcggaggt ggacaaggcg gttgccggcg tcgagggcat
      841 cgtgcatctc ggcggcttct cggtcgaagg atcgtgggac acgatcctgc aggccaacat
      901 cattggttgc tacaaccttt tcgaggcggc gcggcgccat cgcgtcgagc gggtggtgtt
      961 cgcctcttcg aatcacgtga tcggctatta tccgcgccag cggcgcatcg gcgtcgacgt
     1021 cgcgctgcgc ccggattccc gctacggcgt cagcaaagcc ttcggcgagg cgctcggcgc
     1081 gctttacgcc ttcaagcacg ggttgcgcgt cacttgcatc cgcatcggca atttcggcga
     1141 tgcgccggtc gaccgccgcc ggctgtcgat ctgggtcgcg ccgcaggacc tcgtgcagct
     1201 cgtgcgcatc ggcctcgagc accccgacat ccggcacgag attttctacg gcgtgagcga
     1261 caacgtgcgc ggctggtggg acaacgccgc cgcctttcgc ctcggctatc gaccgcaagg
     1321 ccgctccgag gagcacagcg ccgcggcgct cgccgccgac gcgaagcttc cgcccgatcc
     1381 ggtgggcgac tggtatcagg gcgggccgtt ctgcagcgat gagttcagtg acggcatcga
     1441 gcgcgcgccg ctttgaacgg gggccggcga ggccttagag gctgcgcccg tcgaaggacg
     1501 cgggcgcaag cgccgcaacg tcgacctcgt cgagacagcg cacattgacc gcaaccatct
     1561 cgtcaccttg cggactggtt ccgcgcgaaa acgcgcccac cccgcactgc ggacagaaca
     1621 gatgatggat ggatttcttg ccgaactgat agtccttgag ggcttcctcg ccggcgcgca
     1681 gcgcgaagct ttccgccggc acgaacgacc acagcgcgcc acgcttctgg cagatcgagc
     1741 agttgcaggt tgtgactttg ccgagatcgg tcgtcacctc gaagcgcact tcgccgcaat
     1801 ggcagccgcc ggtataggtc ttgggtccgg acatatcggc ctcggctaat cgtgctgaaa
     1861 ctcgatgcgc ttgtcgggcc gctcgagatc gatgtgcaag gcctcgcaca gccggttcga
     1921 ataattccac atgccgcaga acaccgtcag ctccacgatc tgtttctcgc tgaaatgttg
     1981 ccgcattgcc gcgaaggcat tctcatcgtc gcgcgcggtg agcagcgtga cggcttcggc
     2041 ccagcggatc gctgccttct gccgctcgtc gagatcgggg gaacgcatgt agtcgctgct
     2101 ttgcgccgcc tttatttgtg cctcggtcag gccgaccttt ctgcccagcg gcacgttgtg
     2161 cgacatgcaa taggcactct ggttgagcgc cgaggttttg atgatgacga gctgctggat
     2221 cttcacgtag tccggatctg atttcacgtt gtcgaggcgg atcgcagcgt tcggcagcat
     2281 ccagcccgcg agcgcagccg gctggtgcgc cagcacctgc gagaaattgc tgatgcgccc
     2341 ccactgcttg cgaacaccgt cgtagacttc gcgggtgtcg gcgtctgcct cctcgggctt
     2401 gatcattcgc acgcgcgcca cgggaaacct cctgctgcgg gcaatctagc gcagcggccg
     2461 agaaggcgcc gcacagctgt gagttgcatg agacggtagc tccggggccg cctcgaatac
     2521 ttgttgttcg cgtcccgcga tattcaactg ttggttgtgc catcgtgtcc cgatgccgtc
     2581 gcgcccgtcc gcctcaaggt cgattcctgt tacggttata agggagcttc tcgcgctcgg
     2641 tctgaggcac cgctggaggg gccgccggtg caaagccttt ccgcgttcat ccgtgctgga
     2701 attcgatatt gcaacctttt tcgatcgata cttgctcgag cgcctccatc gctcccttca
     2761 agagaccgac ctgctcggca tcggtcgctt tgccgtcttt catgttcgca gcctcctcgc
     2821 gcgtgatgcg tttttgctcc tcgccgatct ggcggcaggt caagttctcg aatgtcgagg
     2881 gcgagacgta gatgggatcg atgacgtcgg gattgcttgc gcacgcgccg acgactgcag
     2941 cgattgcaag agcaaggtag gtgccaaagc gcatattccg ccgcagtacg gggggttttg
     3001 ggggcgacat tttgcacggt gcaacttggg gtgcaagttg gcgcctcgtc agccctccct
     3061 tgcgagccga gatcgtggtg tcagcaggcg cgtgccgccg acaccgccca tatttgttgc
     3121 agttttactg ccggatgccc ggcgcaatgc tcccgcgccc ctcctgatcg ccgcgaatcg
     3181 cgcgatcttt caagcaagcc gcttccggcg gccatccatg gtccggccgc gagcgtcaac
     3241 ctcattggca gcacgccatc cggaaagccg tgcgcttata tcttggcgct cgaaggagcc
     3301 tccccttcgc aatgttctct tcccgtcata agaattcgct tgcgcaccac aaagccgcgc
     3361 gcgcccgtgc tactcgtg
//
LOCUS       DATCWM010000662         4888 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_199321, whole genome shotgun sequence.
ACCESSION   DATCWM010000662 DATCWM010000000
VERSION     DATCWM010000662.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4888)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4888)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4888
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199321"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..518)
                     /gene="tsaB"
                     /locus_tag="VIQ50_12995"
     CDS             complement(<1..518)
                     /gene="tsaB"
                     /locus_tag="VIQ50_12995"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HEY9361348.1"
                     /translation="MRVLAIDTALEACSAAVLDTGGGITASESVAMTRGHAETLMPLI
                     ARVMNSAGIEFAQLDRIAVTTGPGSFTGLRVGISAARGIALAAGKPAVGLSTLAALAA
                     PLIATDDGTQVVAAIDARHEHIYLQVFGVNGRTLVGPRMASLRDAARAATTAPARIVG
                     SAAKNMAAAWPKG"
     gene            complement(623..1186)
                     /locus_tag="VIQ50_13000"
     CDS             complement(623..1186)
                     /locus_tag="VIQ50_13000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007603885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HEY9361349.1"
                     /translation="MFIQTEPTPNPATLKFLPGRTVLASGTLDMRDKEAAAQSPLAER
                     LFGVAGVSGVFFGSDFIAVTKGAGEWQQLKPAILGAIMEHFMSGAPIVSGTDAAASTQ
                     QDEFFEVKDSETVATIKELIEARVRPAVANDGGDITFRGFKDGIVYLDMKGACSGCPS
                     STATLRHGIENLLRHYLPDVVEVRPMG"
     gene            complement(1358..1852)
                     /locus_tag="VIQ50_13005"
     CDS             complement(1358..1852)
                     /locus_tag="VIQ50_13005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY9361350.1"
                     /translation="MSKKRRSYEAGHSPKFMVVIDDSPECDRALYFASRRALRIGATV
                     LMLRVIETQDRNQQWLGVADIMRAEAHEEANAILDRHAARSSSITGVMPDRVIREGDK
                     TQEVLDLIDDDEDIAILVLAAATSKEGPGPLVSSIARNAGDFPIPVAIVPGHLSDEEL
                     DAMS"
     gene            complement(2032..3078)
                     /gene="trpS"
                     /locus_tag="VIQ50_13010"
     CDS             complement(2032..3078)
                     /gene="trpS"
                     /locus_tag="VIQ50_13010"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008962479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEY9361351.1"
                     /translation="MGFKERVFSGVQPTGNLHLGNYLGAIAKFVALQDRYECIYCVVD
                     LHAITQALAVWGGPEQLPKNTREVTAAFIACGIDPKKNIVFNQSQVAEHAELAWIFNC
                     VARLGWLNRMTQFKEKAGKDRENASVGLYAYPTLMAADILVYRATHVPVGEDQKQHLE
                     LSRDIAQKFNNDFAKSIQAHGYGDAFFPQPEPLIQGPATRVMSLRDGSKKMSKSDASD
                     QSRINLTDDADAIAHKIRRAKTDPHPLPDDEKGLEQRPEADNLVGIHAALAGKSRADV
                     LAEFGGAQFSTFKAALVELAVAKLAPINAEMKRLIADPVYIDSVLADGATRARTIAAE
                     TMKAVKDIVGFVRS"
     gene            3248..4249
                     /locus_tag="VIQ50_13015"
     CDS             3248..4249
                     /locus_tag="VIQ50_13015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine kinase"
                     /protein_id="HEY9361352.1"
                     /translation="MSSTQFDVLGIGNAIVDVIARTDEAFLAQHKMRKGTMQLIDEAQ
                     AARLYDAMGPAVEISGGSAANTIVGVASLGARAAFIGKVKDDELGRVFAHDIRAAGVA
                     FSTPPASAGPSTACCYVLVTPDGERTMNTYLGAAQDLHPKDIEADAIAAAQIIYLEGY
                     LWDPPRAKEAFLKAAKIAHDAGRDVALTLSDAFCVDRYRTEFLELIRAGTVDLVFANE
                     RELHSLYETADFETALQALRKDARLAVITRSEKGCLVVTREQTEAVPASPVERVVDAT
                     GAGDLFAAGFLAGISRGADYRTAARLAALVAAEVIQHLGARPETSLKALAQDNGFDF"
BASE COUNT          835 a         1538 c         1560 g          955 t
ORIGIN      
        1 cctttcggcc aagccgccgc catgttctta gcagcggagc ccacgatgcg tgccggtgcg
       61 gtcgtcgccg cgcgtgcggc atcgcgtaag cttgccatcc gaggacccac gagcgttcgg
      121 ccgttgacgc cgaacacctg cagatagatg tgctcgtgac gggcatcgat cgccgccacg
      181 acctgagtgc catcgtcagt ggcgatcagc ggcgccgcga gtgcggcgag cgtggaaagg
      241 ccgaccgccg gcttgcccgc cgccagcgcg atgccgcgcg cggccgaaat tcccacgcgc
      301 agccccgtga agctgccggg tccggtggtg acggcgatac ggtcgagctg ggcgaattcg
      361 attccggcac tgttcatcac gcgggcgatg agcggcatga gcgtctcggc gtggccgcgc
      421 gtcatggcga cgctctcgct ggcggtgatc ccgccgccgg tgtcgagcac ggcggcggag
      481 caagcttcta gcgcggtgtc aatggcaagg acgcgcatga cctaccttcg cgccgtcatc
      541 caggcccctg gacgactcgg gtagacgtcg atgttcagtt tttactgcgg tttccgtcta
      601 ggtcttcgga tgcaatcgcc gcttatccca tcggtctgac ttcgaccacg tcgggcaaat
      661 aatgccgcag tagattctct atgccgtgac gcagcgtggc ggtcgaggac gggcatccgg
      721 agcaggcgcc cttcatgtcg aggtaaacga tgccgtcctt gaacccgcga aaggtgatgt
      781 ccccgccgtc attggcgacc gccggccgca cccgtgcttc tatcaactcc ttgatcgtag
      841 cgacggtctc ggaatccttc acctcgaaaa attcgtcctg ctgcgtcgat gccgcagcat
      901 cggtgccgct cacgatcggc gcaccggaca tgaagtgttc catgatggcg ccgagaattg
      961 ccggcttgag ctgctgccat tcgccggcgc ccttggtgac cgcgatgaaa tcggagccga
     1021 agaacacacc cgagactccc gcaacgccaa acaggcgttc ggccaacggc gattgggcgg
     1081 ccgcctcctt gtcgcgcata tcaagcgtgc cgctcgccag cacggtgcgc ccgggcagga
     1141 acttgagcgt tgccgggttc ggggtgggtt cggtctgaat gaacatggcc tgttccttcc
     1201 cgccgcaggg taaaagtgtt cgtcaggtca ttgtaatagg tggcgcgccc aggcggaagt
     1261 tcaacccgtc ccgggctggg cggcagggtc aggaggaggt cggacgaggc ctttcggtct
     1321 cacccggcaa ggcgagtggt ggaccccggc tcaccgccta cgacatcgcg tcgagttctt
     1381 catcgctgag gtggccgggg acgatagcaa ccgggatggg aaaatcgccg gcgttcctgg
     1441 cgatgctgga caccagcggc cccggcccct ctttgctcgt tgcggcggcg agtaccagga
     1501 tcgcgatgtc ttcgtcgtcg tcgatgaggt cgaggacttc ctgcgtttta tcgccttcac
     1561 ggatgacacg gtccggcatc acgccggtga tgctggagga gcgtgccgcg tggcggtcga
     1621 gaattgcatt cgcctcctcg tgcgcctccg cgcgcatgat atcggcgacg ccgagccatt
     1681 gctggttgcg gtcttgggtc tcgatgacgc gcagcatgag cacggtcgcg ccgatgcgca
     1741 acgcgcgccg gctcgcaaaa tagagcgccc tgtcgcattc cggcgaatcg tcgatgacga
     1801 ccatgaattt cggcgagtgt cccgcctcgt agctgcggcg cttcttgctc atcggctccc
     1861 ccggccgcca ccagacgaca tgttgtgcgg cggtttcgcc cgcactcttg ccccgcccac
     1921 gccgcgcggt cagcgacgca ttgcaaaacc caaaaccctg catgggtctt cagggacggc
     1981 acaagtctat cacgggaaag gcctcgtaag cagcaggatg ccgcttcgtg atcagctgcg
     2041 cacgaacccg acgatgtcct tgaccgcttt catggtctcc gccgcgatcg tgcgcgcccg
     2101 ggtggcgcca tcggcaagaa ccgaatcgat gtagacggga tcagctatga gacgcttcat
     2161 ctctgcgttg atcggggcga gtttagcgac cgcgagctca acgagcgcag ctttgaacgt
     2221 ggagaattgt gcgccgccga attcggcgag aacatccgcc cggctctttc cggccagcgc
     2281 ggcatgaatg ccaacgaggt tgtcggcctc gggccgttgc tcgagtcctt tctcgtcatc
     2341 cggcagcgga tggggatcgg tcttcgcccg acggatcttg tgcgcgatcg cgtcggcgtc
     2401 gtcggtcaaa ttgatgcgcg actggtccga agcatcggat ttcgacatct tcttcgagcc
     2461 gtcgcgcagc gacatcacgc gcgtcgcagg tccttggatc agcggctcgg gttgcggaaa
     2521 gaatgcgtct ccgtagccgt gcgcctggat cgacttcgcg aagtcattgt tgaatttttg
     2581 cgcgatatcg cgggagagct ccaaatgctg cttctggtcc tctcctaccg gtacatgagt
     2641 cgcccgataa acgagaatat cggcggccat cagcgtggga taggcgtaga ggccgaccga
     2701 ggcgttctcg cggtccttgc ccgctttttc cttaaattgt gtcatgcgat tgagccagcc
     2761 taggcgggcc acgcagttga atatccaggc gagctcggcg tgctcggcga cctggctttg
     2821 attgaagacg atattttttt tcggatcgat accgcaggca atgaaggcgg cggtcacctc
     2881 gcgcgtgttc ttcggtagtt gctcggggcc accccagacc gccagcgctt gggtaatcgc
     2941 gtgcaggtcg acgacgcagt agatgcactc gtaccggtcc tgcagtgcga caaatttcgc
     3001 gatggcgccg aggtaattcc cgagatgcag attgccggtc ggctgtacgc cggaaaacac
     3061 tcgttccttg aagcccatgc ccgaacctcg ccgatggcgc cgccagatgg cacgagctac
     3121 ggtgcacgcg caagtccgct tgtttagggc tgcgacatgg cgcgcctccg cgcgtccttc
     3181 cgcgcatcat tgcctcgagc cgttcgaccg ctatattgcg cgcgctttta aacgagggtt
     3241 cacacacatg tcctcgacgc aattcgatgt tctcggtatc ggcaatgcga ttgtcgacgt
     3301 gatcgcgcgg accgacgagg cttttctcgc ccagcataaa atgcgcaaag gtacgatgca
     3361 gctgatcgat gaggcgcaag ccgcgcgtct gtacgacgcc atggggccgg cggtggagat
     3421 ttccggcggc tcagcggcca ataccatcgt cggcgtcgca agcctcggcg cgcgcgcggc
     3481 cttcattggc aaggtcaagg acgacgagct cggccgtgtc tttgcccacg atatccgcgc
     3541 cgctggcgtt gccttctcga cgcctcccgc gtcggcgggc ccctcgacgg cgtgttgcta
     3601 cgtgctggtc acgccggacg gcgagcgcac gatgaatact tatctcggcg ctgcacagga
     3661 tttgcatcct aaagacatcg aggcagacgc cattgcggcg gcgcagatca tctatctcga
     3721 gggctatctc tgggatccac cgcgcgccaa ggaggctttc ctgaaggcgg caaaaatcgc
     3781 gcacgacgcc gggcgtgacg tcgcccttac tctgtccgat gcgttctgcg tcgatcgtta
     3841 tcgtaccgaa ttcctcgagc tcattcgcgc cggcaccgtc gacctcgtct tcgctaacga
     3901 gcgcgagctg cacagcctct atgagaccgc cgacttcgag acggcgctcc aggcgctgcg
     3961 caaggatgct cggctggccg tgatcacccg cagcgaaaag ggttgtctgg tcgtcacgcg
     4021 tgagcaaacc gaggcggttc cggctagccc ggtggaacga gtggttgacg caaccggtgc
     4081 cggcgatctc tttgccgcgg gctttctggc cggaatctcg cgcggcgccg actaccgtac
     4141 cgcggcacgc ctggcggcgt tggtcgctgc ggaagtgatc caacatctgg gggcgcggcc
     4201 cgagacgtcc ctcaaggcct tggcccagga caacggcttc gatttttgaa ctgtgggcgt
     4261 ctgtagcgtc tagcctaaag cgcgccgcca gcagatcgcc tcttacgtgg caaatccgag
     4321 cagtgcggtt gcgcgcggga acgcattgtc cacagggatt cacagaaatt gcggccgaac
     4381 gccccgccgt ctcggaactg tcgcgctgct ctggcattag tggcgcaagt ttcaggaggg
     4441 ttgttgcctc gaggaggatt ttgacatgtc cgccttcgca gatgacctgc ccagccggtt
     4501 cccggtgggc acgcgctatg tgatcgaggg ccgcggcggc ggtcgaggag ctcttcgcat
     4561 ccatttgcga tatctcgaat ttcccgatgg caggcatgtc gagttgcccg tcgatgtcgc
     4621 acatcgcacg cacgcgcagc gccggcgggg cgggcggcgg accagaaccc gaaaataatt
     4681 tcgcacgcag gaaccgaccg cgccgacggg gcgttgaaca gacagcgccg ggtggagtgc
     4741 ccccagcccc caacccctca cccatccggc gagagaccct ggcccacttt ggcgccgggg
     4801 tcttcctttt cggaccattg tgaaaatccg ccatgagaac ttgggcgctt tgcgagcgga
     4861 tgcatgcgcg cgttacccat aacggggc
//
LOCUS       DATCWM010000663         3593 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_485305, whole genome shotgun sequence.
ACCESSION   DATCWM010000663 DATCWM010000000
VERSION     DATCWM010000663.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3593
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_485305"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            150..1127
                     /gene="ispH"
                     /locus_tag="VIQ50_13020"
                     /gene_synonym="lytB"
     CDS             150..1127
                     /gene="ispH"
                     /locus_tag="VIQ50_13020"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015664162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate reductase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA];
                     GO_process: GO:0050992 - dimethylallyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HEY9361353.1"
                     /translation="MTGSHDHKPALTVLLCSPRGFCAGVVRAIDTVEQALARYGAPVY
                     VRHEIVHNRYVVESLKAKGAIFVEELDEIPDTDAPVIFSAHGVPKSIPAEAQKRNLFA
                     VDATCPLVTKVHREAEIHHKRGREIVLIGHADHPEVVGTVGQLPPGAITLVQSVEEVA
                     RFVPRDSARLAYVTQTTLSVDDTAEIVAALKARFPHIHGPHKEDICYATTNRQEVVKR
                     VAPMVEAMVVVGSPNSSNTQRLREVAERAGCPRAALVQRAADIDWSLFGSIASLGVTA
                     GASAPEVLVEEVIGAFAERYTVKVETVTTADEDMFFPLPRVLRGSEAAE"
     gene            1273..2238
                     /locus_tag="VIQ50_13025"
     CDS             1273..2238
                     /locus_tag="VIQ50_13025"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HEY9361354.1"
                     /translation="MAVYTDVVAEELGAFLAGYDLGELLAYKGIAEGVENSNFLVHTT
                     RGYFILTLYERRVAAEDLPFFLALMEHLHAHGISCPQPVKNKRGEVLGRIAGRPAAVV
                     TFLDGMWIRRPSPAHCGALGEALARLHLAGLDFKHSRVNALSVDGWRSLYENCSERAN
                     EVQPDLKRFLAAELSHLENAWPLRLPQGVIHADLFPDNVFFLGSKLSGLIDFYFACTD
                     TLAYDVAICLNAWCFESDHSYNVTKGRSLLQAYAQVRKLSHEERGALPLLARGAALRF
                     LLTRLVDWFDVPPGALVRPKDPFEYYRKLRFHQAVGSARDYGIDQ"
     gene            2246..2728
                     /gene="rnhA"
                     /locus_tag="VIQ50_13030"
     CDS             2246..2728
                     /gene="rnhA"
                     /locus_tag="VIQ50_13030"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HEY9361355.1"
                     /translation="MSEPHVVVYTDGACSGNPGPGGWGAILAFGDHEKELKGGEAHTT
                     NNRMELMAAIAALEALKRPCLVDIHTDSQYLRNGIMSWINQWKGNGWRTSDRKPVKNV
                     DLWQRLDALLAHHGVRWHWVRGHAGDVRNERADRLARDGLEEARSRAPTRRPTASAGD
                     "
     gene            complement(2755..3237)
                     /locus_tag="VIQ50_13035"
     CDS             complement(2755..3237)
                     /locus_tag="VIQ50_13035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEY9361356.1"
                     /translation="MPIKVGDRVPETKFRVMTSEGPAWKTTDEIFKGKKVALFAVPGA
                     FTGTCHKMHVPSIVQNADAIRAKGVNTIAVTSVNDVFVMDAWRKACAAEKLDFLADGN
                     GEFAKALDLTFDGSGNGLGTRSKRYAMLVEDGVVKKLNVEEAPGKVEVSGGDALLKQL
                     "
     gene            complement(3349..>3593)
                     /locus_tag="VIQ50_13040"
     CDS             complement(3349..>3593)
                     /locus_tag="VIQ50_13040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome C biogenesis protein"
                     /protein_id="HEY9361357.1"
                     /translation="PRVVVEVAAPSATQVDLFAEGPTPDWALPVPVAVDGAPKGLQRF
                     AFDLDGAPPGATYHGAAIALTAVANDAAIEVVTRLD"
BASE COUNT          632 a         1156 c         1142 g          663 t
ORIGIN      
        1 cgacggtgcc ccgcacacgg cggaattgtg cgcccggtac gagacgtggt tgggcggcga
       61 atagcgcaag agcgaagcgc ataggccttc gcttgacaga cgcaggccac aggcccatgt
      121 cgagtgaaac gcgtccgagc gaggtccgaa tgacgggatc ccacgaccac aaacctgcgc
      181 tgactgtgct cttgtgctcg ccgcgcggct tttgcgccgg agtggtgcgg gccattgata
      241 cggtcgagca ggcgctggcc cgctacggcg cgccggtcta cgtacgccac gagatcgtgc
      301 acaatcggta tgtggtcgag agtctcaagg ccaagggcgc cattttcgta gaggagctcg
      361 acgagatccc cgacaccgat gcgcccgtga tcttttcggc tcacggcgtg ccaaagtcga
      421 ttcccgcaga ggcgcaaaaa cgtaatctgt tcgcggttga cgcaacctgc ccgctcgtta
      481 ccaaagtgca tcgcgaggcc gaaatccacc acaagcgtgg tcgcgaaatc gtgctgatcg
      541 gccacgccga tcatcccgag gtggttggaa cggtcgggca gcttcctccg ggcgcgatca
      601 cgctggtcca gtccgtcgag gaggttgcgc gtttcgtgcc gcgcgattcc gcccgtctcg
      661 cctacgtgac gcaaaccacg ctttccgtcg acgataccgc ggaaatcgtg gcagcgctca
      721 aagcgcgctt tccgcacatt cacggtccgc acaaggaaga catctgctat gccacgacca
      781 accggcagga agtggtcaag agggtggcgc ccatggtcga ggccatggtg gtggtcggtt
      841 cgcccaactc atccaatact caacgcctcc gagaagtcgc cgaacgcgcc ggctgcccgc
      901 gcgcggcact tgtgcagcgc gccgcggata tcgattggtc gctgttcggc tcgatcgcga
      961 gcctcggcgt caccgccggc gcgtccgcac ccgaggtgtt ggtggaggag gtcatcggcg
     1021 cctttgccga gcgctatacg gtgaaggtgg agaccgtcac caccgccgac gaagacatgt
     1081 tcttcccgtt gccgcgcgtg ttgcgaggat cggaggcggc ggaatgagtt cgcgcgcggc
     1141 gcaggtggag ttgaagcatc cgcgttctta aaatctccac gtttggaaaa tccgcattca
     1201 tcgcgtttcc accgagctcc gagtctgcgt ttgctgtcgc ccgcaagcgg gctgacgcat
     1261 gagggatgat ccgtggccgt ctacaccgat gtggtggcgg aagagcttgg cgcttttctc
     1321 gctggttacg atctcgggga acttctcgcc tacaagggca tcgcggaagg cgtggagaac
     1381 tcgaacttcc tcgtccacac cacccgcggc tatttcatcc tcacgctgta cgaaaggcgg
     1441 gtggcggccg aggacctccc gttcttcctc gcattgatgg agcatctgca cgcgcacggc
     1501 atcagctgcc cgcaacccgt caagaacaag cggggcgagg tgctcggccg gatcgccggc
     1561 cgtccggcgg cggtggtcac gttcctcgac gggatgtgga tccggcggcc atcgccggcc
     1621 cactgcggcg cgctcggcga agcgctggca cggctccacc tcgccgggct cgatttcaag
     1681 cacagccgcg tcaacgcgct ttccgtcgac ggctggcgat ccctctacga aaattgcagc
     1741 gaacgcgcga acgaagtgca acccgacttg aagcggttcc tcgccgccga gctttcgcat
     1801 ctcgagaatg cgtggccgtt gagattgccg cagggcgtca ttcacgctga cctctttccc
     1861 gacaacgtat tctttctcgg cagcaagctg tccgggctga ttgacttcta tttcgcctgc
     1921 acggacacgc tcgcctatga cgttgcgatt tgcctcaacg cctggtgttt cgagagcgac
     1981 cattcctaca acgtgaccaa gggcagaagc ctgctgcagg cctatgcgca ggtgcgcaag
     2041 ctttcccacg aggagcgcgg cgcgctgccg ctgctcgccc gcggcgcggc cttgcgtttt
     2101 ctgttgacgc ggctggtcga ctggttcgac gtgccgcccg gggcgctggt gcggcccaag
     2161 gatccgttcg aatattaccg caagctacgc ttccatcagg cggtcggaag cgcgcgcgat
     2221 tacggcatcg accaatgagc gagcaatgag cgagccgcac gtcgtcgtct acaccgatgg
     2281 cgcctgctcc ggcaatccgg ggccgggcgg ctggggcgcg atcctggcct tcggcgatca
     2341 tgagaaggag ttgaagggcg gcgaggctca caccaccaac aaccgcatgg aattgatggc
     2401 ggcgatcgcc gcgctcgagg cgctcaagcg gccgtgcttg gtcgacattc acaccgacag
     2461 ccaatacctg cgcaacggca tcatgtcatg gatcaaccag tggaagggca acggctggcg
     2521 cacctccgac agaaagccgg tgaaaaatgt cgatctttgg cagcggctcg atgcgctgtt
     2581 ggcgcaccac ggcgtgcgtt ggcattgggt gcgcggccat gccggcgacg ttcgcaacga
     2641 gcgcgccgac cgattggcgc gcgacgggct cgaggaggcg cgttcacgcg cccccacgcg
     2701 ccgccctacg gcgtccgcag gcgattagcg ccgaaaacgg atgtcggaat gattctaaag
     2761 ctgcttgagc aaggcgtcgc cgcccgagac ctcgaccttg cccggcgctt cttcgacatt
     2821 gagcttcttc accacgccgt cctcgaccag catggcgtat cgtttcgagc gcgtgccgag
     2881 cccattgccc gaaccgtcga aggtcaagtc gagcgccttg gcgaactcgc cgttgccgtc
     2941 ggccagaaaa tcgagctttt cggcggcgca tgccttcctc caggcgtcca tcacgaacac
     3001 gtcgttgacc gaggtcacgg caatggtgtt gacgcccttc gccctaatgg cgtcggcgtt
     3061 ctgcacgatc gaggggacat gcatcttatg acaggtgccg gtgaaggctc cgggcaccgc
     3121 gaatagggcg actttcttgc ccttgaagat ttcgtcggtg gttttccacg ccggcccctc
     3181 cgacgtcatc acgcgaaact tcgtctcggg cactcgatct ccgaccttga tgggcatgat
     3241 cctcgtcctc tcgcttacag gtgaaggctt gcttttccgc ttcgctcgcg ccgctcgaaa
     3301 gctccgccgc agggtacggc gcccgcccaa attagcgcgc ccggcgaatt agtcgagacg
     3361 ggtcaccacc tcgattgcgg catcgttcgc gactgcggta agggcgatgg cagcgccgtg
     3421 gtatgtcgcg ccaggcggtg cgccatcgag atcgaacgcg aagcgttgca ggcctttggg
     3481 cgcgccatcg accgccaccg gcaccggcag cgcccaatcc ggtgttgggc cctcggcgaa
     3541 caagtcaact tgggttgcgg acggcgccgc gacttcgacg acgacgcgcg gcc
//
LOCUS       DATCWM010000664         5216 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_518017, whole genome shotgun sequence.
ACCESSION   DATCWM010000664 DATCWM010000000
VERSION     DATCWM010000664.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5216)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5216)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5216
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_518017"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..666
                     /locus_tag="VIQ50_13045"
     CDS             <1..666
                     /locus_tag="VIQ50_13045"
                     /inference="COORDINATES: protein motif:HMM:NF013086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEY9361358.1"
                     /translation="GAIAVDPQGRRFVSEAIDYHRFAEAMLAALASSPDRPCFLICDD
                     AFMAKYGLGMVRPGRINLRQALREGYVTQAPTLEALAQAIGIPGDALMQTVARHAGFA
                     RTGVDEDFGKGSDPYQQNLGDPRQRPNPCIGAIDKPPFYALAIHASDIGTSCGLVTDE
                     FAQVLRGDASPIAGLYACGNDMASIMAGAYPGPGITIGPGMTFGFIAARRAAADLKTP
                     SVL"
     gene            complement(697..1026)
                     /locus_tag="VIQ50_13050"
     CDS             complement(697..1026)
                     /locus_tag="VIQ50_13050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361359.1"
                     /translation="MSPSATALIVPIALALALTSARAGTCGDEIASLETAINASESSP
                     ALVPTAPQSVGAQLHHQPTPQSVQRAEAAPSPELNDIITRAKVLDAEGKTKECMELVA
                     TGKLRLQ"
     gene            1532..1903
                     /locus_tag="VIQ50_13055"
     CDS             1532..1903
                     /locus_tag="VIQ50_13055"
                     /inference="COORDINATES: protein motif:HMM:NF024884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4118 domain-containing protein"
                     /protein_id="HEY9361360.1"
                     /translation="MILPIGLSLALIFLTSLVLAQIDSHLRALEVWHDPEDLALVYLL
                     PTIFIAVFFGSTVAVMTSLASGIAAAYFIYPPQFSLLFDHPQDIAELGFILALGITAS
                     KAVAVITDDKPLAWRSFRGEA"
     gene            1977..3644
                     /locus_tag="VIQ50_13060"
     CDS             1977..3644
                     /locus_tag="VIQ50_13060"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEY9361361.1"
                     /translation="MRPIVTAFVLLAVALACSKPASAQAPADIVLLNGKIVTVDDRFT
                     IGEALAIKGERVLAVGSKAEIEKHKGPLTRVLDLGGRTVIPGLIDNHAHYMRAAEYWH
                     SEVRLDGVTSHQEALELIKHKAAESKPGEWVVVLGGWSEEQFVDESRGFSRAELDGIA
                     PDNPVALQLFYFRVYANTAALKAMGIDATTPDPSGIKIDKDVKSQPTGALNGGPAIGL
                     LRDKLGEVARDKTVENARLLMHDLNTMGITAFQDQGGTGMKASHIDAFRIAHDSGQMT
                     VRSFYNYYEEPRSAADVDSLIARMGEIKPFQGDDWFDLTGYGETLYFPLHDALLAKAA
                     NPSADALKLWQQLGLALAKNGIHLNVHAQLRGSIEGFLTAMEAINKERPIKGLRWTFW
                     HLDQAQPQDLERMKRLDIYAQIHSRPTIQGMLMFKVHGDLTYDMPPLRMIQDSGIPWG
                     LGSDATAVTPSSPFTTLWWAVTGKMIGGRQVLRQTISREDALIAHTRANAVFLFQEAN
                     LGSLAPGKYADLLVLDRDYLTVPADEILAIKPLLTMVGGKTVYDAMR"
     gene            complement(3686..>5216)
                     /locus_tag="VIQ50_13065"
     CDS             complement(3686..>5216)
                     /locus_tag="VIQ50_13065"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9361362.1"
                     /translation="APTTRLIDLAGRSVLPGFFDAHPHADREGLKARGGVPIAGLHSV
                     AAIVDVVKRAAQTMPAGEWIVLMPMGEPPHEYISRPEQLTDGRFPTRHDLDAVAPDHA
                     VYIRAVWGWWSRRPFPSVANSLALRRAGVTRDTPAPHNVEIMKDARGEPTGVFLERNF
                     VPVLEYTLFRDLPRFKYADRLESVRLGAQAYAAAGTTSLYEGHGLTPTVIRAYRENAE
                     RGALPLRMHTPISMPSAAFDDKRLLDLFYHYAGVAGGRGRGDDILRVEGINLGGHADS
                     TVADIIAGGYPYDQWAGHFYQAMTPARFVTLGIEAARLGLRVNCVVSRDLEYALGAYE
                     AIDKEVPIRDRRWVVIHVNQASDAQIRRMKALGVIATVVPGFLWMAGDRYGLDRLGEE
                     GIPIRRMLDGGVPVALSTDGVPYSMLWTAWEAIARWDEDGQRRLGESRLTREEALRIA
                     IQSGHRLTFNEDRFGSLEVGKMADMVVLAEDPLSCEIDRLKDIRVDRTFLGGRQVFGP
                     T"
BASE COUNT          930 a         1702 c         1679 g          905 t
ORIGIN      
        1 ggtgccatcg ccgtggatcc ccagggacgc cgcttcgttt ccgaggcgat agactatcac
       61 cggttcgccg aggccatgct ggcagcgctc gcaagctctc cggaccgacc ttgcttcctc
      121 atctgcgatg acgcgttcat ggccaaatac gggctcggca tggtgcgccc cggccgcatc
      181 aacctgcgcc aggccctaag agagggttac gtgacccagg cgcctacgct cgaagcgctg
      241 gcgcaggcga tcggcattcc tggtgacgcg ctgatgcaga cggtggcgcg ccatgccggc
      301 tttgcccgca ccggtgtcga tgaggacttc ggcaagggca gcgatccata tcaacagaac
      361 ctgggcgatc cgcgccagcg ccccaatccg tgtatcggcg caatcgacaa gccgccgttc
      421 tacgcgctcg ccatccatgc cagcgacatc ggcacgagct gcggactagt caccgacgag
      481 ttcgcgcagg tgttgcgggg cgacgcatcg ccgatcgccg gcctctacgc ctgcggcaac
      541 gatatggcct cgatcatggc gggcgcttac cccggcccgg gaatcaccat cgggcccggc
      601 atgaccttcg gcttcatcgc cgcccgccgc gccgccgccg atctgaagac acccagtgtg
      661 ctctagcggc gtgcacttgg cactgagcgc ggccgctcat tgcagcctga gcttgccggt
      721 ggcgaccagc tccatgcatt ccttggtctt gccctcggca tccagaactt tggcgcgcgt
      781 gatgatgtca ttgagctccg ggctcggcgc cgcttcagcg cgttgcaccg actgcggcgt
      841 cggctgatga tggagctgtg cgccgaccga ttgtggagct gtcgggacga gagccggact
      901 gctttcggac gcgtttatcg ccgtctccaa gctcgcaatc tcatcgccgc aggtgcctgc
      961 acgagccgac gtcagcgcaa gggcgagggc gatcggaaca atgagtgcgg tggccgatgg
     1021 actcatgacg atcctccgat atcggatgca tgatgtgaca acacgtaagc gctcatcgcc
     1081 cccagtccac ctgcgcgatc gcctcaacgg acgcccggct cgagataagc gcaacatcgg
     1141 caaagtcgcg gcaatatcgg cgggtaagat gccgggacgc ggcacccaac tcgcggtgga
     1201 aggtgcgctg tgcttcagtg cggataatgg tatcgatttg agccgcgcgc ttccagcggc
     1261 tttccccggc ggagggaggg acgcaacgcg ggtcggctat gtccggggcc gagacgagcc
     1321 gcattgcaat tccgcagcgc agtaggtctc ctgcaccgat cgagctgtgc tatgctttcg
     1381 gccggagcac gggagatagc gggcagtgaa gcggcgcgag ttcgtcagac cgctcggcgg
     1441 cgcggcgccc ggttgctcct ttgcggcacg cggctcgatg ccaaattcgc ttgccggtca
     1501 tgccccgata cgaggcaaaa ccgctcgcga tttgattctg ccgatcgggc tgtccttggc
     1561 tctgatcttc ctcacctcat tggtactcgc tcagatcgac tcgcatttga gagccctcga
     1621 ggtttggcac gaccccgagg atttggccct cgtctatctg ctgccgacaa tattcattgc
     1681 ggtatttttc ggcagcacgg tcgcggtcat gacgtcactc gcaagcggga tcgccgccgc
     1741 ttattttatt tatcccccgc agttcagcct tctgttcgat caccctcagg atattgccga
     1801 gctcggcttt atcctcgcgc tgggaataac cgcgagcaag gcggttgccg tcataaccga
     1861 cgacaagccg ctggcgtggc gcagcttcag gggtgaggct tagctcaggg ccctcagtgt
     1921 gctcggcgat tccgcggcat tatgtaacgg cagcgagccg cttcgaggag accgtcatgc
     1981 gtcccatcgt aactgccttt gtcctccttg ctgtcgcgct tgcctgcagc aagcccgcct
     2041 cggcgcaagc gccggcggac atcgtgttgc tcaacggcaa gatcgtcacc gtggacgacc
     2101 ggtttacgat cggcgaggcg ctggcgatca agggcgagcg cgttctcgcg gtcggcagca
     2161 aagccgagat cgagaagcac aaggggccgc tcacgcgcgt gctcgacctc ggcggtcgca
     2221 ccgtcatccc ggggctgatc gacaaccacg cgcattacat gcgcgccgcg gagtactggc
     2281 atagcgaagt gcggctcgat ggcgtcacct cgcaccaaga agcgctcgag ctgatcaagc
     2341 acaaggcagc cgaatccaaa ccgggcgaat gggtggtcgt gctcggaggg tggtcggaag
     2401 agcagttcgt cgatgaatcc cgcggcttca gccgggccga gctcgacggc attgcgccgg
     2461 acaacccggt ggcgctgcag ctgttctact ttcgcgtcta cgccaacacc gcggcgctca
     2521 aggctatggg tatcgacgcg accactcccg atccgagcgg gatcaagatc gataaggacg
     2581 tgaagagcca gccgaccggc gcgctcaacg gcggccccgc gatcggtctg ttgcgcgaca
     2641 agctcgggga ggtggcgcgg gacaagacgg tcgagaacgc gcggctcctc atgcacgacc
     2701 tcaacacgat gggtattacc gcgttccagg atcaaggtgg aaccggaatg aaggcgagcc
     2761 acatcgacgc gtttcgcatc gcccacgatt ccgggcagat gacggtgcgc tcgttctata
     2821 actattacga ggagccgcgc tccgcggcgg acgtcgatag cctgatcgcc aggatgggcg
     2881 agatcaagcc gttccagggc gacgattggt tcgacctgac cggctacggc gagactttgt
     2941 acttcccgtt gcacgacgcg ctgctggcga aggccgccaa tccttccgcc gacgccctca
     3001 agctctggca acagctcggc ttggcgctgg cgaaaaacgg cattcacctc aatgtgcacg
     3061 cgcaactgcg cggcagcatc gagggcttcc tgacggcgat ggaggccatc aacaaggaac
     3121 ggccgatcaa ggggctgcgc tggaccttct ggcatctcga tcaggcgcag ccgcaggacc
     3181 tcgagcgcat gaaacggctc gacatctacg cgcagatcca cagccgtccc accatccagg
     3241 gcatgctgat gttcaaggtg catggagatc tgacctacga catgccgccg ctgcggatga
     3301 tccaggacag cgggattccc tggggcctcg gctcggatgc gacggcggtg acgccgtcga
     3361 gcccgttcac cacgctgtgg tgggcggtca ccggcaaaat gatcggcggc cggcaggttc
     3421 tgcggcagac catttcgcgc gaagatgcgc tgatcgcgca cacgcgcgcc aatgccgtat
     3481 ttctgttcca ggaggcaaac ctgggatcac tcgcgccggg gaagtacgcc gatctgctgg
     3541 ttctcgatcg cgattacctg accgtgccgg cggacgagat actggcgatc aaacctctgc
     3601 tcaccatggt cggcggcaag acggtctacg acgccatgcg ctgacacgca cgcccgcctc
     3661 cggacaaagg caacgacgat accgatcacg tcggtccgaa cacctgacgc ccgccgagga
     3721 aggttcgatc gacgcggatg tccttgagcc gatcgatctc gcaggaaagc ggatcctcgg
     3781 cgagcacgac catatccgcc atcttgccga cctcgagcga tccgaatctg tcctcgttaa
     3841 aggtcaagcg atggccgctt tggatggcga tgcgcagcgc ctcctctcgc gtcagccgac
     3901 tctcgccgag gcgtcgctga ccgtcctcgt cccagcgtgc aatcgcctcc cacgccgtcc
     3961 acagcatgga ataggggact ccgtcggttg acagcgcgac cggcacgccc ccatccagca
     4021 tgcgccggat ggggatgccc tcctcgccga gccggtcgag gccgtagcgg tcgcctgcca
     4081 tccagaggaa gcccggcacc accgtggcga tgaccccgag tgccttcatg cgccggatct
     4141 gcgcgtcgct cgcctgattg acgtggatga ccacccaacg gcggtcgcgg atcggcacct
     4201 ctttgtcgat cgcctcgtag gcgcccagcg cgtattcgag atcgcggctg accacgcaat
     4261 tcacacgcag cccgagccgc gccgcttcga tgccgagcgt cacgaagcgc gccggcgtca
     4321 tcgcttggta gaaatgtccg gcccactgat cgtagggata gccgcccgcg atgatgtccg
     4381 cgacggtgct gtcggcatgg ccgcccagat tgattccttc cacgcgcagg atgtcgtcgc
     4441 cgcggcctcg accgcctgca acgccggcat agtgatagaa gagatcgagc agccgtttgt
     4501 cgtcgaacgc cgcgctcggc atgctgatcg gggtgtgcat gcgcaagggg agcgcgccgc
     4561 gctcggcatt ctcgcgatag gcgcggatca ccgtgggggt gagcccgtgc ccttcataga
     4621 gcgaggtcgt tcccgccgcc gcataggcct gcgcgccgag gcgaacgctc tccaggcggt
     4681 ccgcgtactt gaagcggggc aggtcgcgga acagcgtgta ttccaggacc ggaacgaaat
     4741 tccgctccaa gaacacgccg gtcggctcgc cgcgcgcatc cttcatgatc tcgacgttgt
     4801 gcggggcggg ggtgtcgcgc gtcacgcccg cgcgcctgag cgccaacgag ttcgcaaccg
     4861 agggaaacgg acggcggctc caccagcccc acactgcgcg aatatagacg gcgtgatcgg
     4921 gcgcgaccgc atcgaggtca tgccgcgtgg gaaagcggcc gtcggtcaat tgctcggggc
     4981 ggctgatgta ctcgtgcggc ggctcgccca tgggcatgag cacgatccac tcgccggcgg
     5041 gcatcgtctg cgccgcgcgt ttgacgacgt cgacgatggc ggcgacggaa tgcaggccgg
     5101 cgatgggaac gccgccgcgc gccttgagac cttcgcggtc ggcgtgcgga tgcgcgtcga
     5161 aaaaccccgg cagcaccgaa cggcccgcga ggtcaataag gcgggtcgta ggagcg
//
LOCUS       DATCWM010000665         2483 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_425859, whole genome shotgun sequence.
ACCESSION   DATCWM010000665 DATCWM010000000
VERSION     DATCWM010000665.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2483
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_425859"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            613..834
                     /locus_tag="VIQ50_13070"
     CDS             613..834
                     /locus_tag="VIQ50_13070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361363.1"
                     /translation="MQYSDLVVDYRRREQFVGFHDRLERFACIVTHRRAGKTVACIHD
                     LQRAAMLSQQIRPRLAYLSPFLKQSKAVA"
     gene            853..1911
                     /locus_tag="VIQ50_13075"
     CDS             853..1911
                     /locus_tag="VIQ50_13075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361364.1"
                     /translation="MAPLRAIGASVHESELRVDYINGGQVRLYGADNPDALRGIYLDG
                     IVLDEYADMDPRVWSEIIRPALADRAGWAVFIGTPKGRNAFFELWRRAQSEANWFSLM
                     LKASDTALIPASELALAKRDLSEEQYAQEFECSFEAAVVGAYFGKLMVRAEAERRIAA
                     VPYEPAAPVWTSWDLGVRDATAIWFAQVIGREIRIVDYYEASGVDLGHYVRELNARPY
                     VYAGHVVPHDAQARELGTGKSRLEVLASLGLKNLQVAPMHRLEDGINAVRLFLPKCWF
                     DAEKCARGIDALKLYRAGVDERRADPSGTPLLKPQPVHDWTSHAADSFRYLALTLDRQ
                     AMQTGFYRRIDYATEGVV"
     gene            complement(1960..2205)
                     /locus_tag="VIQ50_13080"
     CDS             complement(1960..2205)
                     /locus_tag="VIQ50_13080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361365.1"
                     /translation="MARCETCGNDYDKAFQVSMNGSTHTFDSFECAIHALAPKCKTCG
                     IRIMGHGLEKEGIFFCCEHCAERAGVTGLRDRIGTAA"
BASE COUNT          459 a          777 c          787 g          460 t
ORIGIN      
        1 tcgatacgca cgagacggag cttggcgtcg gccggcccta tctcgatcgc gaccctccac
       61 atctcgcgcc gatcgatggc agggaatttg ccgccaagcg cgggcgaacg atcgtgcgaa
      121 agatagggcc agagaaagcc ccgcatcagg agtcgacagc gaggactgag cggctgagcc
      181 aagttcgtcc cgctcgcgcg atggccgggc atccggcaat gcccccggcg gtctatgctc
      241 aatcggcgcc cagggggtgg taggcgcaat taataagaaa aatttggcaa gctagaaggc
      301 tgttgtgtgg gactaaagct tgcagggata taagaaattc cgtttgcgcg attttccgct
      361 ggactcgcgt tacaagaatc ttccaaaaga gcgtattcac cgaaattgcg ctttgatcat
      421 ccttccgatg ccgccgtctc tttagagcgg atgacctcca tagcttcggc tatgcaggcg
      481 aggtgagaga tcagcggcgt agctcggtta gcgcccggga cgcgcaacgc accaatcagt
      541 cgcaactcaa taactcagcg ttaccgcgtt tcgggcccga ggcacctatg caagtcgcat
      601 gaacataagc cgatgcaata ctccgatctc gttgtcgact accgacggcg tgaacagttc
      661 gtcggcttcc acgatcgact ggagcgtttc gcctgcatcg tgacgcaccg ccgtgccggc
      721 aagacggtgg cttgcatcca cgacttgcag cgcgccgcaa tgctatccca gcagatccgc
      781 ccccgtttgg cctacctttc gccctttctc aagcaatcga aggcggtggc gtgagactat
      841 ctgcgcagcg ccatggcccc gctgcgcgcc atcggcgcga gcgtgcacga gagcgagctg
      901 cgcgtcgact atatcaacgg cgggcaggtg cgcctttacg gcgccgacaa ccccgacgcg
      961 ctgcgcggca tctacctcga cggcatcgtg ctcgacgaat acgccgatat ggatccgcgg
     1021 gtgtggtcgg agatcatccg cccagccttg gccgaccgcg ccggctgggc ggtattcatc
     1081 ggcacgccca agggccgcaa cgccttcttc gagctgtggc ggcgcgcgca atcggaagca
     1141 aactggttct ccctcatgct caaggcaagt gacactgctc tcattccggc gagcgagctc
     1201 gcgctcgcca agcgtgatct cagcgaggag caatatgcgc aggagttcga atgctcgttc
     1261 gaggcggcgg tggtcggcgc ctacttcggc aagctgatgg tgcgcgccga ggcagagcgg
     1321 cgcatcgccg cggtgcctta cgaacccgcc gcgccggttt ggacctcatg ggatctcggg
     1381 gtgcgcgatg cgaccgcgat ctggttcgcg caggtgatcg gccgcgagat ccgcatcgtc
     1441 gactattacg aggcgtccgg cgtcgatctt ggccactacg tgcgcgagct caatgcacgg
     1501 ccctacgtct acgccgggca cgtcgtgccg cacgacgcgc aggcgaggga actcgggacc
     1561 ggcaagagcc ggctcgaagt gctcgcgagc ttggggctca agaacctgca ggtcgcaccc
     1621 atgcaccgtc ttgaggacgg catcaacgcg gtgcgcctgt ttctgccgaa atgctggttc
     1681 gatgccgaga agtgcgcgcg cggaatcgac gcgctcaagc tctaccgcgc cggggtcgac
     1741 gagaggcgcg cggacccctc gggcactccg ctgttgaagc cgcagccggt tcatgactgg
     1801 acctcgcatg cggccgattc gtttcgctac ctcgcgctca cgctcgatcg ccaggcgatg
     1861 caaaccggct tttaccggcg catcgactac gcaacagaag gcgtggtctg atggcagggc
     1921 gcgcgatgac gcctcgcgtg ggcgaaagag ctctgaaacc tatgctgccg tgccgatgcg
     1981 gtcgcgcagg ccggtgacgc ccgcccgctc ggcgcaatgc tcgcagcaga agaaaatccc
     2041 ttccttctcg agtccgtggc ccatgatgcg gatgccgcaa gtcttgcatt ttggcgccag
     2101 cgcatggatc gcgcattcga agctgtcgaa ggtatgggtg gaaccgttca tgctcacttg
     2161 gaacgccttg tcgtagtcgt ttccgcacgt ttcacatctg gccatgagga cctcgcacct
     2221 gttgcttggg ctcgagggta taacccggcc catcgcgggc agttccggcc caaatggcat
     2281 ggggaggccg ccgaaatacc tcgaatttcg ccgggaattt ggccgggaaa acgccctgcc
     2341 agcgtgaacc ttttgttgcg ccgccgcgac taagggcaaa ggacctccgg gcgcttgcgg
     2401 cgcaacggag gcggctgggt gggtagtcaa atgtcggtcc ccaagcttgc agctggcttg
     2461 ctcgcgcttg ccatcggtgc cgc
//
LOCUS       DATCWM010000666         2011 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_420688, whole genome shotgun sequence.
ACCESSION   DATCWM010000666 DATCWM010000000
VERSION     DATCWM010000666.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2011
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_420688"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            206..>2011
                     /locus_tag="VIQ50_13085"
     CDS             206..>2011
                     /locus_tag="VIQ50_13085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015668342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEY9361366.1"
                     /translation="MKVHVIGAGPAGLYFAILAKKAWPHMRITVSERNRPDDTFGFGV
                     VFSDETLDTFETYDHESYRAIVGHFAYWDDIEIHFRGTTHRIGGNGFCGCSRAKLLKI
                     LGRRARALGVDIQYQREISPLDPAIRDADLVVVADGINSRMREAFADRFKPRVDLRPN
                     WFSWMGSTRPFDAFTFFFRETTHGIFIGHCYQYEPQRSTWIVETDPQTFARAGLDKLD
                     EAASARFAEGLFAQELQGHRLTTNRSIWRNFPTVRCERWVADNMVLIGDAKATAHFSI
                     GSGTKLAMEDGIALYEAFRSTGGRDVAAALSQFEARRREEVEKTQHSADVSLVWFEHV
                     DRFWNMDPTRFAFGLMTRSKAITYDNLALRAPEFVKRADCLVARDTRALGFDVDTSKP
                     VVPMFHPFRLRGLALENRVVVSPMCQYSAQEGMPNDWHLVHYGSRAIGAAGLMFTEMT
                     DVSAQARISPGCAGIYNDAHEAAWKRIVDFVHTHSTTKFCLQLGHAGRKGATKLMWEG
                     IDEPLEEGGWPIISASPVPYFPHSAVPREMTRADMDQVIADFVAATKRGHRAGFDMLE
                     MHAAHGYLLASFISPLTNTRRDEYGGTLENRLRFPL"
BASE COUNT          347 a          681 c          606 g          377 t
ORIGIN      
        1 ccgataccgc ggcccccgcc ggtcaccaaa gcgtgctggc cgtctaaccg catggtcgaa
       61 ttccaaggga tcccgtattc ggacgaatat gttttaggct taaaattttt aagcttcaag
      121 cttgtcggcg gaatatttta ggcttaaaaa taatgccgca gcccgggccc cgcccggacg
      181 tgcaatgcaa gcgttcgagg cgcgcatgaa ggttcacgtg atcggcgccg gccccgccgg
      241 cctctatttc gcgatcctcg ccaagaaggc ctggccgcac atgcgcatca ccgtgtccga
      301 gcgcaaccgg cccgacgaca ccttcggctt tggcgtcgtc ttttccgacg agacgctcga
      361 caccttcgag acctacgacc acgagagcta tcgtgccatc gtcggccact tcgcctattg
      421 ggacgacatc gagatccatt tccgcggcac gactcaccgc atcggcggca acggtttctg
      481 cggctgctcg cgcgcgaagc tgctaaaaat tctgggccgg cgggcgcgcg ccctcggcgt
      541 cgacattcag taccagcggg aaatctcgcc gctcgatccc gccatccgcg acgccgatct
      601 cgtggtggtc gctgacggca tcaattcgcg catgcgcgag gcgttcgccg atcgattcaa
      661 gccgcgcgtc gatctgcgac cgaactggtt ttcctggatg ggctcgaccc ggccgttcga
      721 tgccttcacc ttcttcttcc gcgaaaccac gcacggcatc ttcatcggtc attgctatca
      781 gtacgagccg cagcgctcga cctggatcgt cgagaccgat ccgcagacct tcgcccgtgc
      841 cggcctcgac aagctcgacg aagccgcgtc cgcgcgtttc gccgaaggct tgttcgcgca
      901 ggagctgcaa gggcaccggc tgaccactaa tcgctcaatt tggcgcaatt tcccgaccgt
      961 ccgctgcgag cgctgggtcg ccgataacat ggtgctgatc ggcgatgcca aggcgaccgc
     1021 gcatttctcc atcggctcgg gcaccaagct tgcgatggag gacggcatcg cgctttacga
     1081 agcgttccgc tcgaccggcg ggcgggatgt ggcggcggct ctttcgcaat tcgaagcgcg
     1141 gcggcgcgag gaggtcgaga agacccagca ctccgccgac gtctcgctcg tctggttcga
     1201 gcacgtcgat cggttctgga acatggatcc gactcgcttt gccttcggcc tgatgacgcg
     1261 ctccaaggcc atcacctacg acaacctcgc gctgcgcgcg cccgaattcg tcaagcgcgc
     1321 cgattgcctg gtcgcccgcg acacgcgcgc gctcggtttc gacgtcgata cctcgaaacc
     1381 ggtcgtcccg atgttccacc cgttccgtct gcgcgggctg gcgctcgaga accgcgtcgt
     1441 ggtgtcgccg atgtgccaat actccgcgca agagggcatg cccaacgact ggcatctcgt
     1501 gcactacggt tcgcgcgcga tcggcgcggc gggcttgatg ttcaccgaga tgaccgacgt
     1561 atcggcacaa gcgcgcatct ctcccggctg tgccggcatc tacaacgacg cgcatgaagc
     1621 cgcgtggaag cgcatcgtcg atttcgtgca cacgcactcg acgaccaagt tctgcctgca
     1681 gctcggccat gccggccgca agggcgcgac caagctgatg tgggagggca tcgacgagcc
     1741 gctggaggag gggggctggc cgatcatctc ggcgtcgccg gtgccctatt tcccgcacag
     1801 cgcggttccg cgtgagatga cccgcgccga catggaccag gtgattgccg acttcgtcgc
     1861 ggcgaccaag cgcgggcatc gcgccggctt cgatatgctg gagatgcacg cggcgcacgg
     1921 ttatctgctg gcaagcttca tttcgccgct caccaacacg cgccgcgacg aatatggcgg
     1981 cacgctcgaa aaccgcctgc gcttcccgct c
//
LOCUS       DATCWM010000667         7290 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_31975, whole genome shotgun sequence.
ACCESSION   DATCWM010000667 DATCWM010000000
VERSION     DATCWM010000667.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7290
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31975"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..840)
                     /locus_tag="VIQ50_13090"
     CDS             complement(<1..840)
                     /locus_tag="VIQ50_13090"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEY9361367.1"
                     /translation="MAKETAELADYAATCRYEDFPPDVIERTKQCITDTVAAVIFGYD
                     LPWSRMVVAFAERNGAGGHSRILGRGTQRVHAPAAALANGALAHAFEMDNLTWPSTGV
                     HPGATLLASALALAQERRRGGREFIAAIVAGAEVMIRIGRATQHSNEGRGFHAPGTTG
                     PFGAAVACAKLLRLDGERTRNALGIAGSLACGLLEFARAGNGAMVKRLHLGRAAESGV
                     LAATLASEGFTGPASVLEGEFGFLRVFCGSEFDARELTRALGASYATRSIMLKRFPCH
                     ITAH"
     gene            1327..2632
                     /locus_tag="VIQ50_13095"
                     /pseudo
     CDS             1327..2632
                     /locus_tag="VIQ50_13095"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            complement(2654..3538)
                     /locus_tag="VIQ50_13100"
     CDS             complement(2654..3538)
                     /locus_tag="VIQ50_13100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015685376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-5-aminohexanoate cleavage protein"
                     /protein_id="HEY9361368.1"
                     /translation="MQRKVMISCAVTGSADTPGRNPAVPVTPEQIAQSAIDAAKAGAA
                     IVHIHVRDPKTTRPSMEISLYQEVVDRIRASGRDVIINLTTGPGARFVPADDDPQKPG
                     PGTTMRTPAERVRHVVALKPEICSLDMGSMNMGPTVFINTPTHLEAMATAIRDAGVLP
                     ELEVFETGHLLLAKRLIESGHIMTPGMFQICLGISWAQPATTEAMTYMRNLLPAGSPW
                     FAFGISLHQFPMVAQAVLLGGHPRVGLEDNIYLEKGKLAPSNAALVEKAVKIVEVLGD
                     VVATPADARAILGLKATQ"
     gene            3934..4299
                     /locus_tag="VIQ50_13105"
     CDS             3934..4299
                     /locus_tag="VIQ50_13105"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009450025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HEY9361369.1"
                     /translation="MNELLLDYLPLVIFIAVALVIGLALLVVPFLVAYKAPDPEKLSA
                     YECGFNAFDDARMKFDVRFYLVAILFIIFDLEMSFLFPWAITLGDLGLYGYWSMMVFL
                     GVLTVGFIYEWRKGALEWD"
     gene            4290..4859
                     /locus_tag="VIQ50_13110"
     CDS             4290..4859
                     /locus_tag="VIQ50_13110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018325974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HEY9361370.1"
                     /translation="MGLERTAVIAPPGKGILDPRKPAPTDDAFFTGLNGELADKGFLV
                     TGSDDLIIWARTGSLMWMTFGLACCAIEMMQMSMPRYDAERFGFAPRGSPRQSDVMIV
                     AGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYV
                     PGCPPTAEALLYGVLLLQKKIRRTGTIER"
     gene            4873..5484
                     /locus_tag="VIQ50_13115"
     CDS             4873..5484
                     /locus_tag="VIQ50_13115"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HEY9361371.1"
                     /translation="MDDRLDKLGEAIAGALPGSVVGYRVANGELTVKATPGDIAKVAA
                     FLRDDERCQFWSIIDITAVDWPGRERRFDVVYHLLSPKQNLRIRVKLEVDERTPVPSI
                     ISVFPGANWFERETYDLYGVLFTGHPDMRRLLTDYGFEGHPLRKDFPLTGFVEVRYDD
                     EQKRVIYEPVQLTQEFRSFDFLSPWEGPDYALPGDEKAGDGKA"
     gene            5492..6682
                     /locus_tag="VIQ50_13120"
     CDS             5492..6682
                     /locus_tag="VIQ50_13120"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HEY9361372.1"
                     /translation="MAETELRNFTINFGPQHPAAHGVLRLVLELDGEVVERVDPHIGL
                     LHRGTEKLIEAKTYLQAIPYFDRLDYVAPMNQEHAFCLAAEKLLGLAVPRRAQLIRVL
                     YCEIGRLLSHVLNVTTQAMDVGALTPPLWGFEEREKLMGFYERASGSRLHAAYFRIGG
                     VHRDLPPKLLDDIAAFCDPFLKVCDDLEDLLTENRIFKQRNVDIGVVTLADAWAWGFS
                     GVMVRGSGAAWDLRKAQPYECYSELDFDIPIGKNGDNYDRYCIRMEEMRQSIKIMKQC
                     LEKLHASDGQGPVAVEDHKIVPPRRGEMKRSMEALIHHFKLYTEGFHVPAGEVYAAVE
                     APKGEFGVYLTADGGNKPYRCKIRAPGFAHLQAMDFLCRGYMLADISAILGSLDIVFG
                     EVDR"
     gene            6682..>7290
                     /gene="nuoE"
                     /locus_tag="VIQ50_13125"
     CDS             6682..>7290
                     /gene="nuoE"
                     /locus_tag="VIQ50_13125"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012252755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HEY9361373.1"
                     /translation="MAVRRLADSAVQPQSFTFTVENLDWAKGEIAKYPEGRQRSAIIA
                     LLWRAQEQAGGWLPQKAIEHVAEVLGMPNIRALEVATFYTMFNLAPVGRAHVQLCGTT
                     PCVLRGADKLIKLCHERIGEPLEVTADGKLSWIEVECLGACVNAPVAQINYDYYEDLT
                     SETFSKILDDLAAGKPVKPGPQVARQLSAPSGGPTTLTDPALY"
BASE COUNT         1244 a         2326 c         2310 g         1410 t
ORIGIN      
        1 gtgcgcggtg atgtggcagg gaaagcgctt gagcatgatc gaacgcgtgg cgtagctcgc
       61 gcccagggcg cgggtgagtt cgcgcgcatc gaactcgctc ccgcagaaca cgcgcagaaa
      121 cccgaattcg ccttcgagca cgctggccgg gccggtaaag ccctcactcg ccaatgtagc
      181 cgcgagcacc ccgctctcgg ccgcgcgccc gaggtgtagg cgcttgacca tggcgccgtt
      241 gcccgcgcgg gcaaattcca acaacccgca ggcaagcgaa ccggcgatgc ccagcgcgtt
      301 tcgcgtgcgc tcgccatcaa gacgcagcaa cttcgcgcag gcgactgccg cgccgaacgg
      361 gcccgtggtg ccgggcgcgt ggaagccgcg gccctcgttg ctgtgctggg tcgcgcggcc
      421 gatgcggatc atgacctccg cgccagcgac gatcgcggcg atgaattcgc gcccgccgcg
      481 tctgcgctcc tgggcaagcg caagcgcgga ggccaacagc gtcgcgccgg gatgcacgcc
      541 ggtgctgggc caggtcagat tgtccatctc gaaggcatgt gcgagcgcgc cgttggccaa
      601 ggccgccgcc ggcgcatgca cccgttgcgt cccgcgtccc agaatgcggc tgtggccgcc
      661 ggcgccgttc ctctcggcaa aggccacaac cattcggctc cagggcaggt cgtagccgaa
      721 gatgaccgcg gcaaccgtgt ccgtgatgca ctgcttggta cgttcgatca cgtcgggcgg
      781 gaagtcctcg taacgacacg tcgccgcgta gtcggcgagc tccgcagtct ctttcgccat
      841 tggaatactg gctgtggttt ggaataggca gatcgcgccg gcgcaagcta gggcggaagc
      901 cgcacgggcg acaagctact ccatgcgaaa atgaagtcag cagcggtcac ggtcacaatc
      961 cttctgctga aggcgcggcg ccgccggcta acgcgacggc agcgaccccc gccgtggcgg
     1021 tcgcgcttga agcgtgcgat cggcgggtct agcttcgcgc tcctcgcccc ggatcatctc
     1081 ccacctccaa tcgactgagt tcctgcggct cgcgccatga cctcggacag cccaccgccg
     1141 agacgaagtg gagtctccgg cagaaccgtc caagattaca tcgatgagac cccgctttgg
     1201 gcggacgcga cgcccgttgg ccacgctccg atcacccaga tgcagtggct aatctggggg
     1261 ctggccgccg ccggcaagtt cttcgaaggg atggtggtct tcaccactgg cgtggccttg
     1321 ccgctcatgg gcaaggagtt cgccttgggt gcgaccgaac aaggtgtggt cgctgcgtcc
     1381 tcgctgttcg gcatcttgat cggcgcctcg gcgttcggcg ggcttgccga ccggtatggc
     1441 cgcaagcaga tcttcatcat cgaaatggtg ctgttctgca tcttcacggc ggtgctggcg
     1501 ctcagtccgt cttacgcggt ggcagtcgcg gcgctcgtag ggattggcgt cgcgctcggg
     1561 tgcgactatc cgaccgccca tctcatcatt tcggaaagca ttcccagccg cattcgtggc
     1621 cggatggtgc tggcggcgtt cggtttccag gcggtgggcg gcttggtggg cacggccgtc
     1681 ggcttcctga tcctgttcga aaaccccgat atcgacgctt ggcgttggat atacgccagc
     1741 acgctcgtgc tcgcggtgcc cgtcaccctc ggccgttttc atcgtgcaaa gcccactctg
     1801 gctgatgttt cgcggccgca tccaggaggc gcaggcggca acacagcggc ttctgctgcg
     1861 cgctccgccc tacccgaaga aggtcgttct gcatcgcctg caaactggcg acaagcgcga
     1921 gtatccggag agcgcatcct ggtccgcgct atttcgcgga acaaacctgc gccggaccat
     1981 cctcgcttcg gtgccatggt tcctgcagga cctcggcacc tacggcattg gaatctttac
     2041 ccccaccatc ttggccacgc tgatcggcgc cagcatcgat catccccgca acacggccga
     2101 gctcattcaa cgcgatatcc tggcgactaa aggagccgcg ttcatcgacg tgctgctgat
     2161 cgtgggaatc gtctttgccg tgctgctcac cgatcgcgtc ggccgaatcc gtctgcagat
     2221 tttcggcttc atcggctgcg ccgtgggcct gctgctcgcg gcgctatcgc tccacgtcgg
     2281 gggaacgctg tccggcgtgc tgctctttgc cgggttcatg gtattcagct tcatgactaa
     2341 tatcggtccc aacgcgatga cctatctgat cgcgggcgag gtgtttccca tttcgatccg
     2401 cggggcgggc gccggctttg cggcctcctt cgccaaaatc ggcgccgtgt tgaccgcgtt
     2461 cctgttcccg atcctgctca aggacatcgg caccgatctt ctgctgttga tcttggtcgg
     2521 gaccagcctt gtcggagcgc tcgtcacctg gcgctacgcc atcgaaacca agggcatcaa
     2581 cctggaaacc atcgacgaca aggggatggc cgtgcccgcg gcgggcgaat gatgcgaggg
     2641 tgcgcctagc cgcctactgc gtcgccttca ggccgaggat tgcgcgcgca tcggccgggg
     2701 tggcgacgac atcgccgagc acctcgacga tcttgaccgc cttttccacc agcgccgcat
     2761 tgctcggcgc gagcttgccc ttctcgagat agatgttgtc ttcgagtccg acgcggggat
     2821 ggccaccaag caggaccgcc tgcgccacca tcgggaattg atgcagcgat atgccgaagg
     2881 cgaaccacgg agaacccgcg ggcagcagat tgcgcatgta ggtcatggcc tcggtggtcg
     2941 cgggctgcgc ccaggagatg ccaaggcaga tctggaacat gcccggcgtc atgatgtgcc
     3001 cgctttcgat caagcgcttg gcgagcagca gatggccggt ctcgaacact tccagctccg
     3061 ggagcacgcc ggcgtcgcgg atggcagtcg ccatggcttc aaggtgcgtg ggcgtgttga
     3121 tgaagacggt tggacccatg ttcatgctgc ccatatcgag gctgcagatc tcgggcttga
     3181 gcgcgacgac gtgccgtacg cgctcggccg gcgtccgcat ggtcgtgccg ggtccgggct
     3241 tttgcgggtc atcgtcggcc ggcacgaaac gtgcgcctgg gccggtggtg agattgatga
     3301 tgacgtcgcg tccgcttgct ctgatccggt cgacgacttc ttggtagagg gaaatctcca
     3361 tgctaggccg cgtggtcttc gggtcgcgca catggatgtg aacgatcgcc gcgcccgcct
     3421 tggccgcgtc tatcgcggat tgggcgatct gctcgggcgt caccggcacg gcggggttgc
     3481 ggccgggggt gtccgccgaa ccggtgaccg cgcatgagat catgaccttc cgctgcatgc
     3541 cgccctcctg gcccctcgat cgcgtctgca ggcgagccta gcgcgaggac agggctcaag
     3601 cccagcggtt ctcgtgcgga aggcaccgca cattcagctt tcatgcgggg ccattgaaag
     3661 cggcgcatgg cagttggcat cgaactcgcg ggtcggcatt cgaacatttt tccgaatccc
     3721 cgcggcgtca cacgggaacc ggcgagaaac cgcgcaacga gcttgtgatg cccaccggct
     3781 tgcctcccat tgtgcactgc gctaaagcct ccttgcgccc gtccttggaa cgaatccgat
     3841 ctgtgacgag ggcaatttcg caagcgccta cggcaccttg gctggagggc gggctttccg
     3901 tacggggccg caacgtcgga gatgagctcg ccgatgaacg aactattgct ggattacctc
     3961 ccactggtga tcttcatcgc ggttgcactc gtcatcggcc ttgcgctgct ggtcgtgccg
     4021 ttcctggtcg cttacaaggc tcccgatccg gagaagcttt ccgcctacga atgcggcttc
     4081 aacgccttcg acgatgcgcg catgaagttt gacgtgcgct tctatctcgt cgccatcctc
     4141 ttcatcattt tcgaccttga aatgagcttc ctctttccct gggccatcac cttgggcgat
     4201 ctcgggctct atggctattg gtcgatgatg gtgttccttg gcgttctgac cgtgggcttc
     4261 atatatgaat ggcgcaaagg agcgctggaa tgggattaga gcgcacggcc gtcatcgcgc
     4321 cgcccggcaa gggtatcctc gatccccgca agcccgcgcc tacggacgat gcgttcttca
     4381 ccggcctcaa cggagagctc gctgacaagg gctttctcgt cactggcagt gacgatctca
     4441 tcatctgggc gcgcaccggc tcgctgatgt ggatgacctt cgggcttgcc tgctgcgcga
     4501 tcgagatgat gcagatgtcg atgccgcgct acgacgcgga gcggttcggt ttcgccccgc
     4561 gagggtctcc gcgccagtcg gacgtaatga tcgtcgcggg gacgctgacc aacaaaatgg
     4621 cgcctgcgct gcgcaaggtc tacgaccaga tgccggagcc gcgctacgtc atctccatgg
     4681 gttcgtgcgc caacggcggt gggtattatc actactccta ttcagtcgtg cgtggatgcg
     4741 atcgcatcgt gccggtcgat atctacgtac ccggctgccc gccgacagcc gaggcgctgc
     4801 tctacggcgt gctgttgctg cagaagaaga tccgccgtac aggcaccatc gaacgctgat
     4861 gggtctcatg caatggacga caggctcgac aaactcggcg aggccatcgc cggcgcgtta
     4921 ccaggctcgg tcgtcggcta tcgcgttgcc aacggagagc tgacggtcaa agcgaccccc
     4981 ggcgatatcg cgaaggtcgc cgcgtttctg cgtgatgacg agcgatgcca gttctggagc
     5041 atcatcgaca ttaccgcggt cgactggccc ggccgcgaac ggcgtttcga cgtcgtttat
     5101 catctgctgt cgcccaagca gaacctgcgc atccgggtga aactcgaggt ggatgagagg
     5161 acgccggttc cctcgatcat cagcgtgttc cccggcgcca actggttcga gcgcgaaacc
     5221 tacgatctct acggcgtgct cttcaccggc catccggaca tgcgtcgtct gctcaccgac
     5281 tacgggttcg aaggtcatcc gctgcgcaag gattttcccc tcaccggttt cgtcgaggtg
     5341 cgttacgacg acgagcagaa gcgcgtcata tacgaacccg tccagctgac gcaggaattc
     5401 cgaagtttcg attttctctc gccatgggag ggcccggact atgcgctgcc gggggatgag
     5461 aaggcgggcg acgggaaagc ttagcgacgc catggctgaa acggagctgc gcaacttcac
     5521 cattaatttc gggccgcagc accccgcggc gcatggcgta ttgcgcctgg tcctcgaact
     5581 cgacggcgaa gtggtggagc gcgtcgaccc gcatatcggg ctcctgcatc gcggcaccga
     5641 gaagctgatc gaagccaaga cctatctgca ggcgattccg tatttcgacc ggctcgatta
     5701 cgtggcgccg atgaaccagg agcacgcgtt ctgcttggcg gcggaaaaac tcctcggtct
     5761 cgcggtgccc aggcgcgcgc agctcatccg cgtgctctat tgcgaaatcg gacggctgtt
     5821 gtcgcacgtt ctcaacgtga cgacgcaggc catggatgtc ggcgcgctca cgcctccgct
     5881 ctggggcttc gaagagcgcg aaaagctcat gggattctat gagcgtgctt ccggcagccg
     5941 gctgcatgcc gcgtatttcc gcatcggcgg agtgcaccgg gacttgccgc cgaagctgct
     6001 cgacgacatc gcagcgttct gcgatccgtt cctcaaggtc tgtgacgacc tcgaggacct
     6061 cttgaccgag aaccgcatct tcaagcagcg caacgtcgac atcggcgtgg tcacgctagc
     6121 cgatgcctgg gcttggggct tttccggcgt gatggtgcgc ggatcgggcg cggcctggga
     6181 tttgcgcaag gcgcaaccct acgagtgcta ttccgagctc gatttcgata tccccatcgg
     6241 aaagaacggc gacaattacg atcgttactg tatccgcatg gaggagatgc gccagtcgat
     6301 caagatcatg aaacagtgtc tggagaagct gcacgcgtcg gacgggcagg ggccggtcgc
     6361 ggtcgaggat cacaagatcg tcccccccag gcgcggcgag atgaagcgct cgatggaggc
     6421 actgatccat cacttcaagc tctacaccga aggcttccac gttcctgcgg gcgaggtcta
     6481 tgccgccgtc gaagcgccga agggcgaatt cggcgtctat ctcaccgccg acggcggcaa
     6541 caagccctac aggtgcaaga tccgggcgcc cggcttcgcc catctgcagg ccatggactt
     6601 cctctgccgg ggctacatgc ttgccgacat atcggcgatc ctcggctcgc tcgacatcgt
     6661 tttcggggag gtcgatcgct gatggccgtg cgtcgcctcg ccgattccgc agttcagccc
     6721 cagagcttca ccttcacggt cgagaatctc gattgggcca agggcgagat cgccaaatat
     6781 ccggaaggcc ggcagcgttc ggctatcatt gcgctgctct ggcgcgcgca ggagcaggcc
     6841 ggcggctggt tgccgcaaaa ggcgatcgag cacgtggccg aagtcctcgg catgccgaac
     6901 atccgcgcac tcgaagtcgc gaccttctac acgatgttca acctggcgcc ggtcggacgc
     6961 gcgcacgttc agctctgcgg tacgacgccc tgcgtgctgc gcggggcgga taagttgatc
     7021 aagctctgcc acgagaggat cggcgagccg ctcgaggtca cagccgacgg caagctgtcg
     7081 tggatcgaag tcgaatgtct cggggcctgc gtgaacgcgc cggtcgcgca gattaattac
     7141 gattactatg aggatcttac gtcggaaacc ttcagcaaga tcttagacga tctcgccgcc
     7201 ggcaaacccg tcaaacccgg tccccaggtg gcgcggcagc tctccgcgcc cagcggcggg
     7261 ccgacgacac ttaccgatcc tgccctctac
//
LOCUS       DATCWM010000668         2459 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_350529, whole genome shotgun sequence.
ACCESSION   DATCWM010000668 DATCWM010000000
VERSION     DATCWM010000668.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2459
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_350529"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..558)
                     /locus_tag="VIQ50_13130"
     CDS             complement(<1..558)
                     /locus_tag="VIQ50_13130"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEY9361374.1"
                     /translation="MTQRRSEKLTVAAEDAGERLDRVLAQRVAELSRSRHKALILAGR
                     VAIDGATIRDPGHRVNAGESIMLELPPAEDAAISPEDIALNVVFEDAELIVIDKPAGL
                     VVHPGAGNWTGTLANALVAHCGASLTGVGGVKRPGIVHRLDKDTSGLMVVAKTERAHR
                     ALSRQFAEGGRGKALRRGYLALVWGA"
     gene            557..895
                     /locus_tag="VIQ50_13135"
     CDS             557..895
                     /locus_tag="VIQ50_13135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361375.1"
                     /translation="MSNPSADDKAPLDPAAARIVAKVRWLMLISGATTLMAIAAVVGV
                     IGYRVFKAEGSAPAEVTALLPKGARVIATAIAEDRIAVTVDVGGAIEIRTFDAKTLKP
                     TGRLKFATEP"
     gene            1296..1955
                     /locus_tag="VIQ50_13140"
     CDS             1296..1955
                     /locus_tag="VIQ50_13140"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9361376.1"
                     /translation="MPTASLMIQSGTSLPLLRSARRRSCWLSQRQLRQLPCKSSSLTR
                     EAIKRKLNFGFGQGTLPHLIEAFKIATGTDIVSIPYRGGAQAITDMLGGRVDMNFGAG
                     ATLLPFIRENKIKALAVTSPTRSTELPDVPTMIECGLPSLTTVTHYGLFGLAGIPADV
                     VTKLNGEMNEALETPEVRASMLSVGIEPTGGSPQDFAAVIAQQLQQWGPVAKAIRFRM
                     D"
     gene            2097..2169
                     /locus_tag="VIQ50_13145"
     tRNA            2097..2169
                     /locus_tag="VIQ50_13145"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2131..2133,aa:Glu,seq:ctc)
BASE COUNT          429 a          798 c          797 g          435 t
ORIGIN      
        1 cgcgccccac acgagggcca ggtagccgcg acgcagcgcc ttgccgcggc ctccctcggc
       61 gaactggcgg ctaagcgcgc ggtgagcgcg ctccgtcttg gccaccacca tgaggccgct
      121 ggtgtccttg tcgagccgat gcacgatgcc ggggcgcttg acgccaccga ccccggtgag
      181 gctggcgccg caatgggcga cgagcgcgtt ggccagcgtg ccggtccagt tgccggcgcc
      241 gggatgcacg acgagcccgg ccggcttgtc gatgacgatg agctcggcgt cctcgaacac
      301 cacgttgagc gcgatgtctt ccggcgagat cgcggcgtcc tcggcgggcg gaagctcgag
      361 catgatgctc tccccggcgt tgacgcgatg gccgggatcg cggatcgtgg cgccgtcgat
      421 cgcgacgcga cccgcgagga tcagcgcctt gtggcgcgag cgcgacagtt cggccacgcg
      481 ctgcgccagc acgcggtcga gccgctcgcc ggcgtcctcg gcggcgactg tcagtttctc
      541 gctgcgccgc tgcgtcatga gcaatccgtc ggcggacgat aaagcgccac tcgatcccgc
      601 ggccgcgcgc atcgtcgcca aggtgcgctg gctgatgctg atctccggcg ccaccacgct
      661 gatggcgatc gccgcggtgg tcggcgtcat cggctatcgc gttttcaagg ccgagggaag
      721 cgcgccggcg gaggtcacgg cgctgttgcc gaagggtgcg cgcgtcatcg caaccgcgat
      781 cgcggaagat cgcatcgcgg tgactgtcga tgtaggcggc gcgatcgaga tccgcacctt
      841 cgacgcaaag acgctcaaac cgactggccg gctcaaattc gcgaccgagc catgatattg
      901 gcgaggcgtg acccttttaa cagcgatggg cgtgacttcc ggatagcggc ggcgagggac
      961 caaggcgatg aaagccgccg tgacaaggcg atctctgatg cgcgcggcgg cgacgggtgc
     1021 cctcgccgtg gctctcgtcg gctcgggccg tgcccagtct tcttatcccg acaggccgat
     1081 taagatcatc gtgccgtaca ccgctggatc tcccaacgac accttcgcga gagccgttgc
     1141 tccggtccta acgttgcgcg tcaaacagcc ggtcattgtc gataaccggg ccggcgccgg
     1201 cacgctactc ggcgtgaaag ccgtcatgac gtcggccccc gacggctaca cgttgctctt
     1261 caccaacacg ccgacgcacg tcatcgcgca gtttgttgcc gacggcatcg cttatgatcc
     1321 aatcagggac ttcgctccca ttgttgcggt cggcacgacg tcgctcgtgc tggttgtctc
     1381 agcgacaact ccggcaacta ccctgcaaga gttcatcgct tacgcgagaa gcaatcaagc
     1441 gcaagctgaa cttcggcttc ggccaaggga cgctgccgca tctgatcgaa gcgttcaaga
     1501 tcgccacggg caccgatatc gtcagcattc cttatcgcgg cggggcgcag gcgatcacgg
     1561 acatgctggg tggccgcgtc gatatgaact ttggcgccgg ggcgacgctc ctgccgttca
     1621 ttcgtgaaaa caagatcaaa gcgctcgccg tgacgagtcc aacgcgcagc accgagcttc
     1681 ccgacgttcc caccatgatc gagtgcggct tgccgagcct gaccacggtc acgcattacg
     1741 gacttttcgg gctcgcgggc attcccgccg acgtggtgac gaagctaaac ggcgaaatga
     1801 atgaagctct cgaaacgcct gaggtccgcg ccagcatgct gagcgtcggg attgaaccga
     1861 cgggcggatc gccgcaggat tttgcggcgg tgatcgcgca acaattgcaa caatggggtc
     1921 cggtcgcgaa ggcgatccgg ttccggatgg attaggtgat ggcagatggc gatcttcgag
     1981 cgcttcgccg ccgggcgccg gaccgccatt tgaggacgtc tggcttttat cccggggcgc
     2041 aggggcgctc cttgcgcgcg gcggtgatcg gcgctatctc cggagcttct ccgcctgctc
     2101 ccttcgtcta gcggcccagg acgtcgccct ctcacggcga aaacaggggt tcgagtcccc
     2161 tagggagcgc gagcaagatc aatttcttag ctttctaaca gcgacccggg tccaaaatcg
     2221 gtccaatatc ggggacgcga gtaagctctc cgcggctgca aagggcgtca tacctcatcc
     2281 agtggccgga tcttgtcgac tgtagtggct atttgaccat cggcccgaaa atgctgaccc
     2341 aaaagctgcc atttcgaccg ttcagcccag ggaaatgaaa tcccgccaga tgcgatgacg
     2401 atcaccgcgg gagcgggggt cctttcccag gccgacgcta cgcctgtcgg aaccccgtg
//
LOCUS       DATCWM010000669         2484 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_21174, whole genome shotgun sequence.
ACCESSION   DATCWM010000669 DATCWM010000000
VERSION     DATCWM010000669.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2484)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2484)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2484
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21174"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..245
                     /locus_tag="VIQ50_13150"
     CDS             <1..245
                     /locus_tag="VIQ50_13150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018455082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HEY9361377.1"
                     /translation="YALWLYRKVVFGALTKPSLAAIKDLDYREIITLGPLVALTILFG
                     IYPKPVIELSAASVAQLLENYERAIGAAKTAALLAH"
     gene            265..1716
                     /gene="nuoN"
                     /locus_tag="VIQ50_13155"
     CDS             265..1716
                     /gene="nuoN"
                     /locus_tag="VIQ50_13155"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HEY9361378.1"
                     /translation="MSDTVEIPTLLPALPEIVLAIGAMLLLMVGVFRGERATKGVEAG
                     AVLILLLAGAIVVWLPAGNLVTFNGSFVVDGFARFLKLLALAGSAVTIVMSSHYLAVE
                     KRGSFEYSILILLSSAGMMMLISAADLIALYLGLELMSLALYVVAAIDRDSVRSTEAG
                     LKYFVLGALSSGMLLYGASLVYGFTGTVSFAGIAKAASAGASGAANLGLVFGLVFLFA
                     GFCFKVSAVPFHMWTPDVYEGAPTPITAFFAAAPKVAGIAMFVRTTIVAFPGILAQWQ
                     QIVVFVAIASMALGSFAAIGQKNIKRLMAYSSIGHMGFALVGLAAGTQQGVQGVLVYM
                     AIYVAMTLGAFACILSMRRDGQMVEEIADLAGLARTKPTMAFFFAMLLFSLAGVPPLA
                     GFFAKFYVFLAAIQAGLFTLAVIGVITSVVGCYYYLAIVKTMYFDEPTKPFEPTPHEL
                     KAVLAVTGLFNLLFFVYPSPLIQAADVAAKSLF"
     gene            1734..>2484
                     /locus_tag="VIQ50_13160"
     CDS             1734..>2484
                     /locus_tag="VIQ50_13160"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015930667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004077 - biotin-[acetyl-CoA-carboxylase]
                     ligase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HEY9361379.1"
                     /translation="MKLEPRATAAGVRLIAHEVLGSTNAEALRLAREGGQGPFWVTAE
                     RQTAGRGRRGRAWISPEGNLHASLLLTDPATAEHWPQLSFVAALAAHDAVVEVAADLK
                     RLLGIKWPNDLLLAGAKLGGILIEAESGISAVAVGIGVNCSSHPTDTDFPATDLAGVG
                     APVSPAALFGALSVKMLGRLAQWNAGEAFSTIRADWLARAAGMGESVRVQLAECELVG
                     RFEALDESGRLVLRLPDGNAMTIATGDVFTPA"
BASE COUNT          367 a          792 c          793 g          532 t
ORIGIN      
        1 tctacgcgct gtggctttac cgcaaggtcg tcttcggcgc gctgaccaag ccgagcttgg
       61 ctgcgatcaa ggacctcgac taccgcgaga tcatcacgct tggtccgttg gtcgccttga
      121 cgattctgtt cggcatctac ccgaagccgg tgatcgaact ctcggcggct tcggttgcgc
      181 agcttctcga gaattacgag cgcgccatcg gagcggccaa gactgccgcc ctcctggcgc
      241 attgaccatg gctcgaaacc gacgatgagc gacaccgtcg aaatccccac gctgctgccc
      301 gccttgccgg aaatcgtgct cgccatcggc gccatgctgc tgctgatggt cggagtgttc
      361 cgcggcgagc gagcgaccaa aggcgtcgag gcgggggcgg tcctgatatt actccttgca
      421 ggtgccatcg ttgtttggct gccagcgggc aatctggtca ccttcaacgg cagtttcgtg
      481 gtggacggct ttgcccggtt tctcaagctt ctcgcgctcg cgggatcggc ggtgacgatc
      541 gtgatgtcgt cgcattatct cgcggtcgag aagcgcggga gcttcgaata ttcgatcctc
      601 atcctgcttt cgagcgccgg catgatgatg ctcatctcgg ccgccgacct gatcgcgctt
      661 tatctcggcc tcgaattgat gagccttgcg ctttatgtgg tcgcggcgat cgatcgcgat
      721 tccgtccgct cgaccgaggc gggactgaag tatttcgtgc tcggcgcgct gtcctccggg
      781 atgttgcttt acggggcctc actcgtctac gggttcaccg gcacggtgag ttttgccggt
      841 atcgccaagg cggcgagtgc gggagcgagt ggcgccgcca acctcggact ggtgttcggg
      901 ctggttttcc tgttcgccgg cttctgcttc aaggtttcgg cggtgccatt ccacatgtgg
      961 acgcccgacg tctacgaggg cgcgccgacg ccgatcaccg ccttctttgc cgccgcgccc
     1021 aaggtcgccg ggatcgccat gttcgtgcgg acgacaatcg tggcgtttcc cggcatcttg
     1081 gcccagtggc agcagatcgt cgtcttcgtc gccatcgcct cgatggcgct cggctctttt
     1141 gccgcaatcg gccaaaagaa cattaagcgt ctgatggctt attcgtccat cggccatatg
     1201 ggcttcgccc tggtcgggct tgccgccgga acgcagcagg gcgttcaagg cgtgctggtg
     1261 tatatggcga tctatgttgc catgacgctc ggagccttcg cctgcatcct gtcgatgcga
     1321 cgcgacgggc agatggtgga agagattgca gatctcgccg gccttgcccg caccaagccg
     1381 acgatggcgt tcttcttcgc catgctgttg ttctcgctcg ccggcgttcc acccctcgca
     1441 ggcttcttcg ccaagttcta cgtatttctc gcggcgattc aggcggggct gttcacgctt
     1501 gccgtcatcg gcgtaatcac cagcgtcgtg ggttgttact attatttggc catcgtcaag
     1561 acgatgtatt tcgacgagcc gacaaagccg tttgagccga cgccgcacga gctcaaggcc
     1621 gtgctcgcgg tcaccggcct gttcaatctc ctgttcttcg tttatccgag cccgttgatc
     1681 caggcggcag acgtggcggc gaagtcgctg ttctgaatga tgctcgacgc tgaatgaaac
     1741 tggagcccag ggcgactgcg gcgggcgtgc ggctgatcgc gcacgaggtg ctcggctcga
     1801 ccaacgccga ggcattgcgt ctggcgcgtg aaggcggcca gggaccgttc tgggtcaccg
     1861 ccgagcggca gaccgccggt cgcggtcggc gcggccgggc ctggatttcg ccggagggca
     1921 atctccacgc gagcttgttg ctcacggacc cagcgacagc cgagcattgg ccgcaacttt
     1981 cgttcgtcgc ggcgctcgct gcccacgatg ccgtcgtgga ggtcgccgcc gacctcaagc
     2041 ggctgctggg gatcaaatgg ccgaacgacc ttctgctcgc gggcgcgaag ttgggcggca
     2101 tcctgatcga agcagagagc ggtataagcg ccgttgccgt cggcatcggc gtcaattgct
     2161 cctcgcatcc gacagacacg gattttcctg cgaccgacct ggccggcgtc ggcgcgccgg
     2221 tctcccccgc cgcgctgttc ggcgcgctct cggtcaagat gctcggacgc ctcgcgcaat
     2281 ggaacgccgg cgaggccttt tccaccatcc gcgctgactg gcttgcccgc gccgccggca
     2341 tgggagagag cgtgcgcgtg caacttgccg agtgcgagct ggtcggtcgt ttcgaggcgc
     2401 tcgacgagtc gggtcgcctc gtcctgcgct tgcccgacgg caacgccatg acgatcgcca
     2461 ccggcgacgt gttcacgccc gcac
//
LOCUS       DATCWM010000670         3785 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_253321, whole genome shotgun sequence.
ACCESSION   DATCWM010000670 DATCWM010000000
VERSION     DATCWM010000670.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3785)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3785)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3785
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_253321"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..508
                     /locus_tag="VIQ50_13165"
     CDS             <1..508
                     /locus_tag="VIQ50_13165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="extensin family protein"
                     /protein_id="HEY9361380.1"
                     /translation="EAVWLADKTRVAVTPPAIVRCTLAEVIVQWVREDVAPTVRSLGS
                     ALKTIDNFDSYECRGRNRIVGAKLSEHGKANAVDIRALKLANGKVVELTDPQVAKDFR
                     ERVRKNACARFTTVLGPGSDGYHENHVHVDLAERASGHRICQWDVREPGEEAEQVPLP
                     PPRPASAP"
     gene            517..1905
                     /locus_tag="VIQ50_13170"
     CDS             517..1905
                     /locus_tag="VIQ50_13170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase"
                     /protein_id="HEY9361381.1"
                     /translation="MPPLSNLAVRDLETLVHPYTNFATLRETGPLIIERGQGVFIYDT
                     EGKSYIEGMAGLWCTALGYGNEELVEAAAAQMRKLSFAHLFTAKSHDPAIELAERLKE
                     IAPVPTSKVFFCSSGSEANDSQIKLVWYLNNALGRPRKKKIISRRKAYHGVTVVAASL
                     TGLANNHLDFDLPIAGILHASCPHHYRFAHAGETEKEFARRLANELDELIRSENPDTV
                     AAFIAEPVMGAGGVIVPPEGYFQEIMKVCRAYDVYMIADEVICGFGRLGTMFGCTALG
                     FEPHSITVAKALTSAYVPMAALTVPEVAYQAMLDESRKIGTFGHGFTYSGHPVAAAVA
                     LKALDIYARERIAEQVARKTPQFQARLAALGKHPLVGDARGMGLVGGVELVADKKTKR
                     SFEPKAGVGARAVRYAEEEGLIVRFLLGDVVSICPPLIITPAEIDELFDRLERALDRT
                     LAWAKHERLIDG"
     gene            complement(1969..2622)
                     /locus_tag="VIQ50_13175"
     CDS             complement(1969..2622)
                     /locus_tag="VIQ50_13175"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015664330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEY9361382.1"
                     /translation="MALRGFTLLLAGVLLAGCVHAQLEPASETSMTARDRKLLANAPY
                     AKANIPPAFQRAIVNYHRKEAPGSIVIDSDARYLYYVLPDNQAIRYGVIVGEDAQSWT
                     GVAKVGRKEEWPGWTPTAGEHQRLGPLPNYVEGGPANPMGARGMYLYSGGKDTLYRIH
                     GTNQPEWIGHAISSGCIRMTNEDVIDLYNRVKLGAIVVVLGPKSGEPRVAAADFGHN"
     gene            3229..3414
                     /locus_tag="VIQ50_13180"
     CDS             3229..3414
                     /locus_tag="VIQ50_13180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361383.1"
                     /translation="MTTKFFLSDPEHWRTRAEEARSLAQDIKEANTKEALLQIAYEYD
                     QLAHRVEDWALRHLPQH"
BASE COUNT          728 a         1188 c         1174 g          695 t
ORIGIN      
        1 cgaggcggtg tggctcgctg acaagacgcg cgtggcggtg acgccgcctg cgatcgtgcg
       61 ctgcactttg gccgaggtga tcgtgcagtg ggtgcgcgag gacgtggcgc ccaccgtgcg
      121 ctccctcgga agcgcactca agaccatcga taacttcgac tcgtatgagt gccgcggccg
      181 caatcgcatc gtcggcgcga aactctccga gcatggcaag gcaaacgccg tcgacattcg
      241 cgcgctcaag ctcgcgaacg gcaaggtggt ggagcttacc gatccccaag tcgccaagga
      301 ctttcgcgaa cgcgtgcgca agaacgcttg cgcccggttc accaccgtgc tcggccccgg
      361 ctccgacgga taccatgaaa atcatgtcca tgtggatctc gccgagcgcg ccagcggtca
      421 ccgcatttgc caatgggacg tgcgcgaacc tggcgaggag gccgagcagg tgccgctgcc
      481 gccgccccgt ccggcctccg cgccatgagg acagccatgc cgccactcag caatctcgcc
      541 gtccgcgacc tcgagaccct ggtccacccc tacaccaatt tcgcgacgct gcgcgaaacc
      601 ggtccgctga tcatcgagcg cgggcagggc gtgttcatct acgacaccga aggcaaatct
      661 tatatcgaag gaatggcggg gctgtggtgc acggcgctgg gctacggcaa cgaagagctg
      721 gtcgaagccg cggcggcgca gatgcgcaaa ctctccttcg cccatctttt caccgcgaag
      781 agccatgatc ccgcgatcga gcttgccgaa cggctcaagg agatcgcgcc ggtaccgacg
      841 tcgaaagtgt tcttctgctc ctcgggttcg gaggcgaacg acagccagat caagctcgtg
      901 tggtacctga acaatgcgct cggccggccg agaaaaaaga agatcatcag ccgccgcaag
      961 gcctatcacg gcgtgacggt ggtcgcggcc tcgctcacgg gcctggccaa caatcacctc
     1021 gacttcgatc tgccgatcgc gggcattctg cacgcaagct gtccgcatca ttaccgcttt
     1081 gcgcatgcgg gagagacgga aaaggaattc gcgcgacggc tggcgaatga actggatgaa
     1141 ttgattcgca gcgagaaccc cgacacggtt gccgccttca tcgcggagcc ggtgatgggg
     1201 gccggcggag tgatcgttcc gccggaaggt tactttcagg agatcatgaa ggtctgccgg
     1261 gcctacgatg tgtacatgat tgcggacgag gtgatctgcg gctttggccg cctgggaacc
     1321 atgttcggct gcaccgcgct gggattcgag ccgcactcga tcacggtggc gaaggcgttg
     1381 acgtccgcct acgtcccgat ggccgctctc acggtgccgg aggtcgccta ccaggcgatg
     1441 ttggatgaaa gccgcaagat cggcacgttc ggccacggct tcacctattc gggtcatccc
     1501 gtcgcggcgg ccgtggcgct caaggcgctc gacatttatg cgcgcgagcg gatcgccgag
     1561 caggtcgcgc gcaagacgcc gcagtttcag gcccgcctcg ccgcgctcgg caagcacccg
     1621 ctggttggag atgcgcgcgg tatgggcctc gtcggcggcg tcgagctggt cgccgacaag
     1681 aagaccaagc gttcattcga gccaaaggcc ggcgtcggcg cgcgggcggt gcgctacgcg
     1741 gaagaggaag ggctgatcgt ccgtttcctg ctcggcgacg tcgtatcgat ttgcccgccg
     1801 ctcatcatca cgccggcgga gatcgatgag ctgttcgacc gcctggagcg ggcgctcgat
     1861 cgcaccttgg cgtgggccaa gcacgagcgg ctcattgacg gctgacctcc ccaaaatgga
     1921 acggtgccgg acttgcgtcc gacgccgctc ccagccccct cgagccccct agttgtggcc
     1981 gaagtcagcc gcggcgaccc gcggctcccc cgatttcggc cccaacacca caacgatcgc
     2041 ccccagtttg acgcgattgt agagatcgat cacgtcctcg ttggtcatcc ggatgcagcc
     2101 cgaagagatc gcatggccga tccactccgg ttggttcgtg ccatgaatgc ggtaaagcgt
     2161 gtccttgccg ccggagtaaa ggtacatgcc gcgggcgccc atcggattgg ctgggccgcc
     2221 ttcaacatag ttcggaagcg ggccgagacg ctggtgttcg cccgcggtcg gcgtccagcc
     2281 cggccattcc tccttgcggc cgaccttggc gacgccggtc caagactgcg cgtcttcgcc
     2341 gacgatcacc ccatagcgga tcgcctggtt gtccggcagc acgtagtaga ggtagcgcgc
     2401 gtcgctatcg ataacgattg aacccggcgc ttctttgcgg tggtagttga cgatggcgcg
     2461 ctggaacgca ggcggaatgt tcgctttggc gtaaggggca ttcgcgagca gcttcctgtc
     2521 gcgcgcggtc atgctggttt ccgacgccgg ttccaattgt gcgtgcacgc acccggcgag
     2581 caaaaccccg gccagcagca gtgtgaatcc ccgtagcgcc atatctgccc ccgtcacgct
     2641 ctccggcgcg acccgcaatc ggttcgtctg aatccccgct aactaggtaa cgaaaagcac
     2701 cctgcagttc cagggcgatg agggcccaat tcgctagtct ttggaacctg ttgcaggaat
     2761 gccgcagttt ggaaccgcgc gcgggaaaaa tgcgcttcac cggccggaat cgttcttaac
     2821 gcgccgcatt gagcgcaacg cgcgatgtct caacgtcgcg tttaccatac ccgccatccg
     2881 ggtggctgat tgccgcgccg gccggaggcg ctcctccggt ggcggaacta agaacgcccg
     2941 gcgcgggtgg gggaacccat ttccttttac ggtctgtttg aaatgtcatg ataggacacg
     3001 gtctgaaaca gaagaagcga atcaataagt tacggtggca aacctatcct cgcgccaata
     3061 ttgagcatca aacgttattt cggcaagtgg caaaccgtcc cgcatcaact ggggccctga
     3121 gcaatttgtg agatttttgc aacgctcggc aaatcttttc gctcagacat attgcagatc
     3181 ggtttttctg ctccctgcac gaacttacaa cagaagaggg cggggggcat gactaccaaa
     3241 ttcttcctga gtgatcccga acactggcgt acccgcgcag aggaagcgcg aagtcttgcg
     3301 caggacataa aagaggcaaa cactaaagag gcccttctgc agatcgctta tgagtacgac
     3361 caacttgctc accgggtcga agattgggcc ctgcggcatc tcccgcagca ttgagtcacc
     3421 agaactcgga acggttaggt cggccagtag cacccccggc ctaacggaca ttttttcaag
     3481 gaatcgtttc agacatgcac acacccgatg tgcgtgcggc cgcgcacgcg cttggcgggg
     3541 acataatcgg gcgcgatcaa attctatgtc ccggccccgg ccatagtccg agagaccgta
     3601 gtctagccgt tcgcgttgtt gcggacggct ttattgttca tagccacgcc aacgacgact
     3661 ggcagacgtg ccgcgaccat gttagcgcgc gactgggctg ggataaccgg cggccagtag
     3721 cgaagcccgc gcgtatgcgg gccacgccgc aagtcccctg acgatactgt cgatcgaatc
     3781 ggctg
//
LOCUS       DATCWM010000671         5792 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_96794, whole genome shotgun sequence.
ACCESSION   DATCWM010000671 DATCWM010000000
VERSION     DATCWM010000671.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5792
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96794"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..857)
                     /locus_tag="VIQ50_13185"
     CDS             complement(<1..857)
                     /locus_tag="VIQ50_13185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma-54 factor"
                     /protein_id="HEY9361384.1"
                     /translation="MALTQRLEIRQSHALVMTPQLMQAIKLLQLSNLDLAAYVEGELE
                     RNPLLERAGEGEGEESPAGREASPDAAPSDWTQADRNQDESSRPEQPVVDIDDVLPGD
                     ADAATSRANGEGPMGYSEWAGTGAGGRENGDYNLEAFVSVETTLADHLAEQLALTITN
                     PARRMIGQYLIDLVDEAGYLNGDLALVAEKLGAPVSEVDAVLAILQGFDPPGVCARNL
                     TECLAIQLKERNRFDPAMQALVAHLDLLAKRDLAALRRLCGVGEEDLTDMIGEIRKLN
                     PKPGLAFGSV"
     gene            complement(1011..1919)
                     /gene="lptB"
                     /locus_tag="VIQ50_13190"
     CDS             complement(1011..1919)
                     /gene="lptB"
                     /locus_tag="VIQ50_13190"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HEY9361385.1"
                     /translation="MLNILALFRHRRAPRARRKAGNGGWQNIDLTSLGGSMPAPRAKK
                     APPSPSRPRRDAPRPEASRGYLAAHKLQKSYGGRRVVDGVSLYVRRGEAVGLLGPNGA
                     GKTTAFYMITGLVKADRGHIELDGHEVTHLPMYQRARLGIGYLPQEASIFRGLNVEDN
                     IRAVLEVVEVDRRRREADLDALLEEFEITRHRKTPSIALSGGERRRVEIARALASRPN
                     YMLLDEPFAGIDPKAVVEIQRLVRRLTTRGIGVLITDHNVRETLDLTDRSYIIYSGQV
                     LMEGRKDDIVNDPEVRRLYLGEEFRV"
     gene            complement(2143..2823)
                     /locus_tag="VIQ50_13195"
     CDS             complement(2143..2823)
                     /locus_tag="VIQ50_13195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptA/OstA family protein"
                     /protein_id="HEY9361386.1"
                     /translation="MRAPRSWRVLVAGTTIALACALGASAASAQKNQGPPNALQGFSQ
                     NRDEPVKIRAGSLELREKDKMATFTGDVHVLQGDTEMHCKVLVVFYEEETGERTVKAA
                     DPGPGGDRQIRRIEAKGDVVVVQKDQNATGDAATFNMRENTVTLVGNVVVTRGVDILR
                     GQRLTVDLTSGVSKMDGGRVDGIFQAGPRGPPDPRSSAPDKNAGAEKNAGAEKNAGAE
                     KSGPAERR"
     gene            complement(2826..3617)
                     /gene="lptC"
                     /locus_tag="VIQ50_13200"
     CDS             complement(2826..3617)
                     /gene="lptC"
                     /locus_tag="VIQ50_13200"
                     /inference="COORDINATES: protein motif:HMM:NF018537.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HEY9361387.1"
                     /translation="MGRKRLPSRMGPSDSLGRRTGLGMHSLTAASDVDERTPRVFTRL
                     GRGDGARAFRAAVRHSRHVRILRVAIPLTAAIVIVAGAVFSYVLKPLSGLSGMPVDVG
                     SMVVSGTKIKMNQPRLAGVTRDNRRYDMVAQAAAQDLTKPDMVELQGVDATMEMRDKV
                     IFKTSAKDGLYNTKTEQLTLNNNIVVTSSSGYQAFLNEAVVDVRASKIVSDKPVEVKT
                     ATWSISANHMEVTESGDLVRFGRGVFVTLVLDSTTSGTGGGARKK"
     gene            complement(3754..4371)
                     /locus_tag="VIQ50_13205"
     CDS             complement(3754..4371)
                     /locus_tag="VIQ50_13205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease H-like domain-containing protein"
                     /protein_id="HEY9361388.1"
                     /translation="MTIRLHRGDLPDLSRYGGGAVAVDTEAMGLDVHRDRLCVVQLSP
                     GDGSADVIQIPASTSEAPNLTKLLADGTILKIFHFARFDLAMLHQRLGIMPFPVYCTK
                     IASRIARTYTDKHGLKDLVRELLGLDLSKQQQLSDWGAEALSDAQLAYAASDVLHLHA
                     LKEKLDAILLREGRAELAAACFRFLPDRVRLDLAGWSDEDIFAHS"
     gene            complement(4394..4478)
                     /locus_tag="VIQ50_13210"
     tRNA            complement(4394..4478)
                     /locus_tag="VIQ50_13210"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4442..4444),aa:Leu,seq:cag)
     gene            4581..5558
                     /locus_tag="VIQ50_13215"
     CDS             4581..5558
                     /locus_tag="VIQ50_13215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complex I NDUFA9 subunit family protein"
                     /protein_id="HEY9361389.1"
                     /translation="MTAVPLETLVTVFGGSGFLGRHVVRALAKLGYRVRVAVRRPELA
                     GFLQPLGQVGQIHAVQANVRHSSSVEAAARDADVVINLVGILFERGRQKFDAVQSLGA
                     ETVALAAAAVGARMIHVSAIGADEGAASQYARSKALGEKQVLRAAPSAVILRPSVLFG
                     PEDDFFNKFAAIARFSPFLPLVGGGHTRFQPVFAGDVASAIVAAIEDRAREGQVYELG
                     GPEVRSFKELMQFMLTTIGRQRLLIPIPFAVAKFQAGFLQLLPKPLLTPDQVELLRGD
                     VIVSEEAKREGRTLEALGIEPLAMAAIVPSYLWRFRKTGQFTGAAAENH"
     gene            complement(5588..>5792)
                     /locus_tag="VIQ50_13220"
     CDS             complement(5588..>5792)
                     /locus_tag="VIQ50_13220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HEY9361390.1"
                     /translation="YDLFKSRGQMSLDNSILVAFGFAVSFVCAWIVVKTFLDYVQHHG
                     FALFAWWRVVVGALGLIALALGH"
BASE COUNT         1019 a         1873 c         1831 g         1069 t
ORIGIN      
        1 accgagccga aggcaaggcc gggcttcggg ttgagtttgc gaatctcgcc gatcatgtcg
       61 gtcaagtctt cctcgccaac cccgcagagc cggcgcaagg ccgcaagatc gcgtttggca
      121 agcagatcca gatgagcgac gagcgcctgc atcgccgggt cgaaacggtt gcgttccttg
      181 agttggatgg cgaggcattc tgtgagattg cgcgcgcaga cgcccggcgg atcgaagccc
      241 tgcaggatcg ccagcacggc gtcgacttcg ctgaccggag caccaagctt ctcggcgacc
      301 agcgcgagat caccattgag gtagccagcc tcatcgacca gatcgatgag atactgtccg
      361 atcatgcgcc gcgccggatt ggtgatcgtt agcgcgagtt gctcggcaag atgatcggcg
      421 agcgtggtct cgaccgagac aaaagcttcg agattgtagt cgccattctc gcgcccgccg
      481 gcgccggtgc cggcccactc ggagtacccc atcggcccct cgccattggc gcgcgaggtc
      541 gcggcatcgg catcgccggg aagaacgtcg tcaatgtcga cgacgggctg ctcggggcgt
      601 gagctttcgt cttgattacg gtctgcctgc gtccaatcgg acggggcagc atccggtgag
      661 gcttcgcgac cggcagggct ttcttcgccc tcaccttctc ccgctcgctc gagcagagga
      721 ttgcgctcga gttcaccctc aacataagcg gccagatcga ggttggagag ctgcagcagc
      781 ttgatggctt gcatcagctg cggcgtcatc acgagcgcat ggctctgccg gatttcgagt
      841 ctttgggtga gcgccattgg cggtagggtg gatttcctgt tgactacgat aacgcgcgcg
      901 tgcgcgatgc cgtttggtcc gattcttgct tatcgccttc ctgtcccggt gtataccagg
      961 aggagggcat ctcgttaagg gtgcaacagg gtcgatagcg gggataacgg ctagacgcgg
     1021 aattcctcgc cgagatagag gcggcggacc tcgggatcgt tcacgatatc gtccttgcgg
     1081 ccctccatca gcacctggcc ggagtaaatg atgtaggagc ggtcagtgag gtctagcgtc
     1141 tcgcggacgt tgtggtcggt aatgagcacg ccgatgccgc gcgtggtcag ccggcgcacg
     1201 agtctctgaa tttcgaccac ggccttgggg tcgatgccgg caaatggctc gtccagcagc
     1261 atgtagttgg gccggctcgc cagcgcgcgc gcgatctcga cgcggcggcg ttctccgccc
     1321 gaaagcgcga tcgagggtgt cttgcgatgg cgcgtgatct cgaactcctc cagcagagca
     1381 tcgagatccg cctcgcggcg acgacggtcc acttcaacga cctcgagcac cgcacggatg
     1441 ttgtcctcca cattgagacc gcgaaagatc gaggcttctt gcggcagata accaatgccg
     1501 agccgcgccc gctggtacat cggcagatgg gtcacttcgt gcccgtcgag ctcgatgtga
     1561 ccgcggtcag ccttgacgag tcccgtgatc atgtagaacg ccgtggtctt accggcacca
     1621 tttggtccta ggaggccgac tgcctcgccg cggcgcacgt aaaggctgac gccgtcgacc
     1681 acccggcgtc ccccgtagct cttttggagt ttatgtgcag cgagatagcc tcgggacgcc
     1741 tccggccggg gcgcgtctcg ccgtgggcgc gacggacttg gaggcgcctt cttggcgcgc
     1801 ggagcgggca tcgacccacc cagcgacgtc aggtcgatgt tctgccagcc gccgttgccc
     1861 gcttttcgtc gagctcgggg ggcgcggcgg tgtcgaaaca acgcgaggat gttgagcacg
     1921 cctctgccct caaagcccga gatccgccga acccaccgaa gtcgatgcca aaccgccgat
     1981 tggaatgggc caacccgtct tgtcaacccg ctgacgcgag ccgagcctta ccgagcaggc
     2041 gcccgcgttc ggcaggttcc gacccggtgt tggagccctg ctttagcgat tgcggcccag
     2101 cggcctgtgc gctgcggcgg cggaacgtca cgaccggcaa catcatcttc tctccgccgg
     2161 gccgcttttc tccgcgccgg catttttctc cgcgccggca tttttctccg cgccagcgtt
     2221 tttgtcgggc gcgctgctgc gcggatcggg agggcctcgc ggccctgctt ggaagatacc
     2281 gtcgacccgg cccccgtcca ttttcgacac gccgctggtg agatcgaccg tcagccgttg
     2341 gccgcgcagg atgtccacgc cccgcgtcac cacgacgttg ccaacgagcg tcaccgtatt
     2401 ctcgcgcata ttgaaggtgg cggcatcgcc ggtcgcattt tgatccttct gaaccaccac
     2461 gacgtcgccc ttggcctcga tccggcggat ctgccggtcg cctcctggcc ccggatcggc
     2521 ggccttgacg gtgcgttcac ccgtttcctc ttcgtagaag acgacgagca ccttgcaatg
     2581 catttccgtg tcgccctgca acacgtgcac atcgcccgtg aaggtcgcca tcttgtcttt
     2641 ctcgcgaagc tccagcgacc cagcccggat cttcaccggc tcgtcgcggt tctgcgagaa
     2701 accctgcagc gcgttcggcg gaccctgatt tttctgggcg ctcgcggcgc tcgcgccgag
     2761 cgcgcaggca agggcgatcg ttgtgcccgc aaccagcacc cgccaggacc gaggtgcccg
     2821 cacgatcatt tcttgcgcgc cccgccgccg gtaccggacg tcgtactgtc cagcaccaag
     2881 gtaacgaaga cgccgcgacc gaagcgcacg agatcgccgg actcggtgac ctccatgtga
     2941 ttggcgctga tgctccatgt tgccgtcttc acctcgaccg gcttgtcgga aacgatcttg
     3001 ctcgcccgaa cgtccaccac cgcctcgttg aggaatgcct gatagccgct cgaggatgtc
     3061 accacgatat tattgttcag cgtcaactgt tccgtcttcg tgttgtacag gccgtccttc
     3121 gcgctggttt tgaagatgac cttgtctctc atctccatgg tcgcatcaac gccctgcagt
     3181 tcgaccatgt ccggcttggt cagatcctgg gcggcggctt gagccaccat gtcatagcgg
     3241 cggttgtcgc gcgtcacccc ggcgagacgg ggttggttca tcttgatttt ggtgccggaa
     3301 accaccattg acccgacatc gaccggcatg ccggagagcc cgctcaaggg cttgagcaca
     3361 tagctgaaca ccgcacccgc gacgatgacg atcgccgcgg tgagcgggat cgcgacgcgc
     3421 aggatgcgga cgtgccggct gtggcgcacg gcggcgcgga acgcgcgagc gccgtcgccg
     3481 cggcctaaac gcgtaaacac gcgcggcgtt cgctcgtcga cgtcggaagc ggccgttaaa
     3541 gagtgcatcc caagccccgt ccgcctgccg agagaatcag acggccccat ccgcgatggt
     3601 aacctctttc gccccatgct cgcgccgaaa tatggccccg gcgcggcata gccgggcaag
     3661 aatcgggggc aggggcaggc aggaaaccct tgctcattga aggcgatagc atcgataggt
     3721 taccgatcca tgcggttccc ggcgtcgccg gcgctaggaa tgggcaaaga tatcctcgtc
     3781 cgaccagccg gcgaggtcga gccgcacccg atccgggagg aagcgaaaac aagccgccgc
     3841 cagctcggcg cgcccctcac ggagaaggat ggcgtccagc ttctccttga gggcatgcag
     3901 gtgcaacacg tcggacgccg cataggcgag ttgggcgtcg ctgagcgcct cggcgcccca
     3961 atcggagagc tgttgctgct tcgacaggtc gaggcccagc agttcgcgga ccaagtcctt
     4021 gaggccgtgc ttgtcggtat atgtgcgggc gatgcgcgag gcgatcttgg tgcaatagac
     4081 ggggaacggc atgattccca aacgctggtg caacatggcg agatcgaagc gggcgaaatg
     4141 aaaaattttg aggatcgtcc cgtcggcgag aagcttggtg agattgggcg cctcgctcgt
     4201 gctcgcaggg atctggatca catcggcgga gccatcgccc ggcgagagct gcaccacgca
     4261 gagccgatcg cggtgcacat cgagtcccat ggcctcggta tcgaccgcta ccgcaccgcc
     4321 gccgtagcgc gacagatcgg gcagatcgcc gcgatgcaaa cggatggtca tgacagcggc
     4381 aatggcacaa atctggtgcc caggagagga ctcgaacctc cacgcctcgc ggcgctagta
     4441 cctgaaacta gtgcgtctac caattccgcc acctgggctt tgcgcgatag gtacggagcg
     4501 cacccctcgt tgtcaaatgg gcgcaccctg tgcagtatca aagcaatccg gtattcggcg
     4561 cacgaggaac ttgagcgagc atgaccgccg tcccgttgga aacgcttgtc accgtgttcg
     4621 gcggctccgg cttcctcggc cgtcacgtcg tgcgcgcgct cgcgaagctc ggataccgtg
     4681 tccgcgtcgc tgtgcgccgc cccgagcttg cgggcttcct gcagccgctg ggccaggtcg
     4741 ggcagatcca tgccgtgcaa gccaatgtgc gccattcgag ctctgtggag gcagctgcgc
     4801 gcgacgcgga tgtggtgatc aatctggtcg ggatcctgtt cgagcgcgga cggcaaaaat
     4861 tcgatgcggt gcagtccttg ggcgccgaga cagtggcgct cgcagccgcc gccgtcggcg
     4921 cgcgcatgat tcacgtctcg gcgatcggcg ccgacgaagg ggccgcatcg caatatgcac
     4981 gttcgaaggc actcggcgag aagcaggtac tccgcgcggc gccgtcggcg gtgatcctgc
     5041 ggccgtcggt cctgttcggt cctgaagacg acttcttcaa caagttcgcg gccatcgccc
     5101 gcttttcgcc gtttcttccg ctggtcggcg gcggccatac ccgattccaa ccggtcttcg
     5161 ccggcgacgt cgccagcgcg atcgtcgccg cgatcgaaga ccgcgccaga gagggccagg
     5221 tgtacgagct tggcggcccg gaagtgcgca gcttcaaaga gctgatgcaa ttcatgctga
     5281 caacgatcgg acggcaacgc ctgttgattc cgattccgtt cgccgtcgcc aagttccagg
     5341 ccggcttcct tcagctgctg ccgaagccac tcttgacgcc cgatcaagtc gaactgctgc
     5401 gcggcgacgt catcgtctct gaggaggcca agcgcgaagg ccgcacgctg gaggcgctcg
     5461 gcatcgagcc gctcgccatg gccgccatcg taccctccta tctgtggcgg ttccgcaaga
     5521 ccggccaatt caccggggca gcggccgaaa accactaaga gcgccagtgg gctccgtaag
     5581 gcgccggtca gtgccccagc gccagcgcga tcaacccgag cgctccaaca acgacgcgcc
     5641 accaggcaaa caaagcaaag ccgtgatgct gcacataatc gagaaatgtc ttcaccacga
     5701 tccaagcgca cacgaacgac accgcaaatc cgaatgccac gagaatgctg ttgtcgaggc
     5761 tcatctggcc gcggctcttg aagagatcgt ag
//
LOCUS       DATCWM010000672         2564 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_123772, whole genome shotgun sequence.
ACCESSION   DATCWM010000672 DATCWM010000000
VERSION     DATCWM010000672.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2564
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123772"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            204..1136
                     /locus_tag="VIQ50_13225"
     CDS             204..1136
                     /locus_tag="VIQ50_13225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015934104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEY9361391.1"
                     /translation="MTTMTISPLRQRMIEDMNARKLGPHSQRSHIHSCKRFAAFLKRS
                     PDTATADDVRRFQLHLAESGLSICNRNRIMTGLRFLLRVTLRRLDLAAEIYYIKEPQK
                     IPLVMSPDETKRLLAMASSLKVRVLLSLAYGCGLRAGEVVRLRASNIDSAQSIIRIEQ
                     AKGRKDRNVMLSPAVLGLLRQWWKVRPTRHDADLPVGQRWLFPGRTPGSPMTTRQLSR
                     LFHKTADSAGIKKPVTLHALRHSFATHLLERGTDIRIIQALLGHEKLDTTARYTRVAT
                     GMIANVESPLDQLSTPRKRPKDRKQEQPQDQPPA"
     gene            1179..2366
                     /locus_tag="VIQ50_13230"
     CDS             1179..2366
                     /locus_tag="VIQ50_13230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
                     /protein_id="HEY9361392.1"
                     /translation="MFRDFGAAWRRANAGHVSLGQMKVMSAIERCRTAALGGHVARCE
                     KCSYTHIAYNSCRNRHCPKCQGTAAKEWLAEREAELLPVPYFHVVYTLPAPIADLAYH
                     NKAVIYDILFRASAEATVTIAADPKRLGARIGITCVLHTWGSAMIHHPHVHMIVPGGG
                     LSVDRSRWVSCRPNFFLPVRVLSRLFRRLFLEQLVAAHEAGRLQFFGQHAALADTAAF
                     AAFLASLRRAEWVVYSKKPFGGPEAVLAYLSRYTHRVAISNRRLIAVEETGVTFKYKD
                     YRIEGPHRYKTMTLATGEFIRRFLIHVLPKGFHRIRHYGLFANGNRAENIARARELLA
                     TPAPQQQPETTATSEPDQPCVLPHPCPCCGGRMIVIEIFAPGCQPSHRPVRQPSMIRI
                     DTS"
     gene            2363..>2564
                     /locus_tag="VIQ50_13235"
     CDS             2363..>2564
                     /locus_tag="VIQ50_13235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361393.1"
                     /translation="MSTLPLTKRNLDPHCRRFLTGNGAAWFKPTNQHATAPAKSSLDH
                     LSDRSTVSETPTAAAQQSLRPRP"
BASE COUNT          479 a          868 c          755 g          462 t
ORIGIN      
        1 gtatgtccgc ttgtcctcga ttgctgccga accgacgatc ggaagctatg ggccaatgca
       61 ctaaatcgct gccgcgatat ctgcggcgag gcctcatact tctgttagcc gggtgagccg
      121 gccaagaggt catctctaac aatccgggaa cgctgtcctg aagatcgagg cgtcgcaacc
      181 tcactaagaa caggagtttc cccatgacta cgatgacgat tagcccgctg cgccagcgca
      241 tgatcgagga catgaacgcg cgcaagcttg gaccgcattc gcagcggagc cacatccaca
      301 gctgcaagcg gttcgctgcg ttcctgaagc gctctcctga cacggccacc gccgatgatg
      361 tccgccggtt tcagctgcac ctggccgaga gcggactgag catctgcaat cgcaaccgga
      421 tcatgaccgg gctcaggttc ctgttgcgcg tgacgctcag gcgcttggat cttgccgccg
      481 agatctatta catcaaagag ccgcagaaga tcccgctggt gatgagcccg gacgagacca
      541 aacgcctgtt ggccatggcg agtagcctca aggttcgcgt gctgctcagc cttgcgtacg
      601 gttgcggcct gcgggccgga gaggtggtga gactgcgggc ctccaacatc gacagcgcgc
      661 agagcatcat tcggatcgag caagccaagg gccgcaagga tcgcaatgtc atgctgtcgc
      721 ccgcggtgct cggcctcctg cggcagtggt ggaaggtgcg cccgacgcgt cacgatgcgg
      781 acctgcctgt ggggcagcgc tggctgtttc ctggccgcac accgggcagt ccgatgacga
      841 cccgccagct cagtcgcctg tttcacaaga cggccgattc ggctgggatc aagaagccgg
      901 tgacactgca cgcgctacgt cacagctttg caacgcacct gttggagcgc ggcaccgaca
      961 tccgcatcat ccaggcactt ctcggtcacg aaaagctcga cacaacggcg cgctacacgc
     1021 gcgtcgccac cggcatgatc gccaacgtcg agagcccgct cgaccagctt tccacgccgc
     1081 gcaagagacc caaggaccgc aagcaagaac agccccaaga ccagccgccg gcgtaacgct
     1141 caagcctcgt gtcgcgtcca gctccggagg tcgcggatat cttccgcgac ttcggcgccg
     1201 catggcgtcg cgccaatgcg ggtcatgtga gtctcggtca gatgaaggtg atgagtgcga
     1261 tcgagcgctg ccgcacggcg gcgctcgggg gtcatgttgc gcgctgtgag aagtgctcgt
     1321 acacccacat tgcctacaac tcctgccgta accggcactg ccccaagtgc caaggcacgg
     1381 cggcgaagga atggcttgcc gagcgcgagg ccgaactgct gcccgtgccg tactttcatg
     1441 tcgtctacac gctgccggcg ccgatcgccg atctcgccta tcacaacaag gcggtgatct
     1501 acgacattct gttcagggcc tcggccgaag cgacggtcac gatcgccgcc gatccgaagc
     1561 gcctcggcgc cagaatcggc atcacctgcg tcctgcacac ctggggctcg gcgatgatcc
     1621 atcatccgca tgtgcacatg atcgtgccgg gcggcggcct gtcggtggat cgatcacgat
     1681 gggtgtcgtg taggccgaac ttcttcctgc ccgtgcgcgt gctctcgcgc ctgtttcggc
     1741 gactgttcct ggagcagttg gtcgcggctc acgaggccgg ccgtctccag ttcttcggcc
     1801 agcatgcagc gctcgccgat accgcagcgt tcgctgcctt cctcgcctcg ctccgacgtg
     1861 cggaatgggt ggtctattct aagaagccgt tcggtggccc tgaggcggtg ctcgcctacc
     1921 tctcacgcta cacccatcgt gtcgcgatct ctaaccggcg cctgatcgcg gtggaggaga
     1981 ccggcgtcac cttcaaatac aaggattaca ggatcgaagg gccccaccgc tacaagacga
     2041 tgaccctggc gaccggcgag ttcatccgcc gctttctgat ccacgtgcta cccaaaggct
     2101 ttcaccgcat ccgccattac ggcttgttcg ccaacggcaa ccgtgcggaa aatatcgcgc
     2161 gggcgcgtga gctgctcgcc acgccggcgc ctcagcagca acccgagacg accgcgacct
     2221 cagagcccga tcagccgtgc gtgctgccgc atccctgtcc gtgctgcggc ggccgcatga
     2281 ttgtcatcga gatctttgcg cccggctgcc agccgagcca ccggccagtg cgccaaccgt
     2341 cgatgatcag gatcgacaca tcatgagcac gctgcctctc accaagcgca atcttgatcc
     2401 tcattgccgc cggtttctga ccggcaacgg cgccgcttgg ttcaagccga caaatcagca
     2461 tgcaacagcg cccgccaagt cttcgctcga ccacctttcc gatcgttcga ccgtatcgga
     2521 aacgcctacc gcagcagccc aacaatccct ccggccgcgc ccac
//
LOCUS       DATCWM010000673         2118 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_496350, whole genome shotgun sequence.
ACCESSION   DATCWM010000673 DATCWM010000000
VERSION     DATCWM010000673.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2118
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_496350"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            112..1074
                     /locus_tag="VIQ50_13240"
     CDS             112..1074
                     /locus_tag="VIQ50_13240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9361394.1"
                     /translation="MNKSLALALSALLLAAATAVAQEWPTKTVRIIVPFGPGSTPDMV
                     GRLIGDRMQQKLGQPFVIENRPGASANTGTDMVAKADPDGYTVGISLGGPLAINTLLF
                     ARMPYDPVKDIALITMLTTQPSVLVVQRSLKVDSVAELVELLRKNPGKYNYGSIGNGS
                     LSHLAMEALALKSGTTMVHVPYAGSPQAMTALLRNDVQMVCLPAISAVPHVASGQIKV
                     LAVSLGRRSALLAGVPTLKEAGLDVEADAWNGLIAPAKTPEATIAKIHEAAVDALGEP
                     VIRETLATQFMEPIPTTPAQFRAKIDADLARWSPVIKALDLKIN"
     gene            1207..1365
                     /locus_tag="VIQ50_13245"
     CDS             1207..1365
                     /locus_tag="VIQ50_13245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5993 family protein"
                     /protein_id="HEY9361395.1"
                     /translation="MEFTILFLAVAVVMVAAWWGTRTLALALFAATLLASIATYLHHA
                     SNVLTLSF"
     gene            1373..1924
                     /locus_tag="VIQ50_13250"
     CDS             1373..1924
                     /locus_tag="VIQ50_13250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HEY9361396.1"
                     /translation="MTRSLAITLNALGLYAIALILLVAFGAQLILHELPCPLCLLQRI
                     QFAMLAVGPILNVRFGPRPSHYAVSLLTAAAGAAFAARQILLHVMPGDPGYGSALLGY
                     HYYTWAFIGFAVAVVALAAMLLFDAQFKEDDKAQPVGGFVRAAVWLVLALTALNVIST
                     LLECGFGACPDNPVTYELLKRAP"
BASE COUNT          354 a          693 c          667 g          404 t
ORIGIN      
        1 ggcggtcgcc tcgcccgtga ttattcagat catgcgattc cacgcgcagg gacaagctgc
       61 gcgagcgacg agaccgcacg gatgatcgta tcgtgaggtg cgagagggtc gatgaataaa
      121 agcttggcgt tggccttgtc cgcgctgttg ctcgctgctg ccacggccgt ggcgcaagag
      181 tggcctacga aaaccgtgcg catcatcgtg ccattcggcc ctggctcgac gccggacatg
      241 gtcgggcgac tgatcggcga ccgcatgcaa cagaagctcg gtcagccgtt cgtgatcgag
      301 aaccggccgg gcgccagcgc caacaccgga accgatatgg tggcgaaggc ggatccggac
      361 ggctacaccg tgggcatcag tctcggcggc ccgctcgcga tcaatacgct gctatttgcc
      421 agaatgccct acgatcccgt caaggacatc gcgctcatca ccatgctgac cacgcaaccg
      481 agcgtgctgg tggtgcagag gagcctgaaa gtggattcgg tcgccgagct agtcgagctg
      541 ctgcggaaga atccgggcaa atacaattac ggctcgatcg gcaacggctc gctgtcgcat
      601 ctggccatgg aggcgctggc gctcaagagc ggcacgacca tggtgcatgt tccctatgcc
      661 gggtcgccgc aggcgatgac cgcgctgctg cgcaacgacg tgcagatggt ttgcctgccg
      721 gcgatctcgg cggtgccgca cgttgcgtcc gggcaaatca aagttttggc cgtttcgctg
      781 ggccggcgct ctgccctcct ggccggcgtg ccgacgctca aggaggcggg cctcgacgtc
      841 gaggcggacg cctggaacgg cctgatcgca ccggcaaaga cgcccgaggc gaccatcgca
      901 aaaattcacg aggcggccgt cgatgccctg ggcgaaccgg tgatccgcga gacgctcgcg
      961 acgcaattca tggagccgat tcccaccacg ccggcgcagt tccgcgccaa gatcgacgcc
     1021 gatctcgcgc gctggtcgcc cgtgatcaag gcgctcgatc tcaagatcaa ttgagcgcgc
     1081 cgcggcggaa cccgtcgtat ccccttattc tcgctgcggt acgttcgcct ccctcgaatg
     1141 ccatacgaaa tcccaacgca cgcgcccggc tcgcttagaa tgcggcgtct gtgctagagc
     1201 acgatgatgg aattcacgat tctgttcctc gccgtcgccg tcgtgatggt cgctgcctgg
     1261 tggggcacgc gaacgctcgc gctggcgttg ttcgccgcca cgctgctggc ctccattgcg
     1321 acctaccttc accacgcgag caacgtcttg acgctgtcat tttaatgcac cgatgactcg
     1381 atcactcgcc ataaccctca acgcgctcgg cctctacgcc atcgcgctga tcttgctggt
     1441 tgcatttggc gcgcagctga tcctgcacga gctgccgtgt cccttgtgcc tgctccagcg
     1501 catccagttc gcgatgttgg cggtggggcc cattctcaac gtccggttcg ggccgcggcc
     1561 cagtcactat gccgtgtcgc tcttgaccgc ggcggccggt gcggctttcg ccgcgcggca
     1621 gattctgctg cacgtcatgc cgggcgatcc cggctacggc tcggcgctgc tcggctatca
     1681 ttactacact tgggccttca tcgggtttgc cgttgccgtc gtcgcgctcg cggccatgct
     1741 gctgttcgac gcccagttca aagaggacga caaggcgcaa ccggtcggcg gtttcgtgcg
     1801 cgcggcggtg tggctggtgc tggcgctcac cgcactcaac gtgatttcga ccttgctgga
     1861 atgcggcttc ggcgcctgcc cggacaatcc ggtgacatac gaactgctca aacgggcacc
     1921 gtgagccgcg cgatcagtcc cacgcgatcg cgcgacggct tgcagctcac atgatacgcg
     1981 aggcgttgac gaccgcatgg agcatgggcg tcctcacgat cgcgacattc gatctccgca
     2041 agcaagaggc gtcacgcatc cgctgacgtt gcggtggaga cgaccttgtc ggtcggcgct
     2101 tgctattcgg cgcgctcc
//
LOCUS       DATCWM010000674         2552 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_442356, whole genome shotgun sequence.
ACCESSION   DATCWM010000674 DATCWM010000000
VERSION     DATCWM010000674.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2552
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_442356"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..630
                     /locus_tag="VIQ50_13255"
     CDS             <1..630
                     /locus_tag="VIQ50_13255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015930948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2778 domain-containing protein"
                     /protein_id="HEY9361397.1"
                     /translation="YASLPLQDPGERAIGQPLTGRSAPKLATTTSSPPASAARKRVAT
                     AEASKDSISPVSPVEQDSRTAIYDIAARTVYLPNGRRLEAHSGFGSYMDDARYVNLKR
                     QGPTPPNTYKLVMRDEPFHGVRAIRLVPVDDGKMFGRDGMLAHSYMLGPSGQSNGCVS
                     FSDYSAFLEAYLKGEVDRLVVVEQLASAPGPKTASGWLPEFIKDLFRRS"
     gene            853..1038
                     /locus_tag="VIQ50_13260"
     CDS             853..1038
                     /locus_tag="VIQ50_13260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361398.1"
                     /translation="MASKQGRRAKRRSWSNADVRELKAHSRSKSPVKKIAKAMKRTAG
                     ALRQKALSLGLPLGHRR"
     gene            1150..1398
                     /locus_tag="VIQ50_13265"
     CDS             1150..1398
                     /locus_tag="VIQ50_13265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361399.1"
                     /translation="MKRREFITLLGAAVAWPLDIGTIGLEWQYAGIAPVHAPGASDFV
                     LRNVNSGAFEIYDVAGKHVHAGPLCPESDQRANTSPSG"
     gene            1467..2432
                     /locus_tag="VIQ50_13270"
     CDS             1467..2432
                     /locus_tag="VIQ50_13270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008130726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9361400.1"
                     /translation="MRLLAIAAALGSMVGAAAAQDYPTRPINVIVPAAAGGPTDAISR
                     ITTQAMSKILGQQITIENAGGAGGTIGTGRVVRADPDGYTLLIYHVGLATAATLYRKL
                     PYDTKSAFAAIGLVTEAPMTIIGRLDLPPDSLKDLVAYLKGAGAKTTVANAGIGSASH
                     LCGMLLMSQLQVTLTTVPYRGTGPVMNDLLGKQVDMTCDQATNTTGPILSKQVKAYAI
                     TTKSRLPSLPELPTADEAGLKGFELAVWHGVFAPRGTPPAIVEKLSMALIGALKDPDL
                     VKRFREISTEPMSADKATPEAAQRTLTSEIDRWAPIIKAAGEYAD"
BASE COUNT          518 a          807 c          777 g          450 t
ORIGIN      
        1 tatgcaagct tgccattgca ggatcccgga gagcgcgcaa taggccaacc gctgaccggc
       61 cgatccgcgc cgaagcttgc aacaaccacc tcatcaccgc ccgcgagcgc cgcaagaaaa
      121 cgggttgcga cggcggaggc atcgaaggat tcgatttcac cggtttcacc ggtcgaacag
      181 gatagccgca ccgcgatcta tgatattgct gcgcgtacgg tctacttgcc gaatggacgc
      241 cggttggaag cgcattcggg ttttggcagt tacatggatg atgctcgcta cgtgaacttg
      301 aagcggcaag ggcccacgcc gccgaatacc tacaaactcg tgatgcgcga cgagcctttc
      361 catggcgttc gtgccattcg ccttgttcca gttgacgacg gcaaaatgtt cggccgagat
      421 ggaatgcttg cacattccta catgctcggt cccagtggcc agtcgaacgg atgcgtgtcc
      481 ttcagcgact actctgcctt cctagaagct tacctgaagg gagaagtcga ccgcctcgtg
      541 gtcgtcgagc agcttgcgag cgcgccgggg cccaagacgg cctcgggatg gcttccagaa
      601 ttcattaaag accttttcag gcggtcctga ccccccggaa accctgcatt gcggctccca
      661 taaccagcaa tagaaattcc actgtgtctt tctgctaaca atttgtggaa gtcgcaggtt
      721 gcagtccgct gaagtcggcg ggctgtgggg aggacttcga ggtcactgag gtgcttgacg
      781 ccgcaagttc gactcgactc gcccgcgcac caccgttatc tgtacgccca attgtgtcgc
      841 aaggggtaag tgatggcaag caaacaaggc agacgcgcta aacgccgctc ttggtcaaac
      901 gcagacgtgc gagagctaaa ggcgcactct cgaagcaagt cgccggtcaa aaagattgcc
      961 aaagccatga agcgcaccgc tggggcgctc cgtcagaagg cgctcagtct tggattgccg
     1021 ctaggccatc gccggtgagt tgatggccgc aaagcgggaa ggcgagtcag cgcccaatct
     1081 aaagattgcc aaggacctca ggcttgaaat tctgccaacg atgcttgcgc tcgccgacga
     1141 ggtaatcgag tgaaacggcg cgagttcatc acgctgctcg gcgcggcggt cgcgtggccg
     1201 ctcgacatcg gaaccatcgg gctggagtgg cagtacgccg gcatcgcgcc ggttcacgca
     1261 cctggtgcgt ccgatttcgt gttgcggaac gtcaatagcg gtgcgttcga aatttacgat
     1321 gttgcgggca aacacgtcca cgcaggcccg ctttgccccg aaagcgacca acgggcaaac
     1381 acgagtccat caggatgagg cggattggcg gcccaatgat tgctgatatc ataagcacca
     1441 aaacaagccc cacgggagga aacacgatgc gcctgctcgc gatcgccgcg gcgcttgggt
     1501 ccatggtcgg cgccgccgcg gcgcaggact acccgacgcg gccgatcaac gtcatcgtcc
     1561 ccgcggccgc gggcgggccg accgatgcga tctcgcgcat caccacgcag gccatgtcga
     1621 aaattctcgg ccagcagatc acgatcgaga acgccggcgg cgcgggcggc accatcggca
     1681 ccggccgcgt ggtgcgcgcc gaccccgacg gctacacctt gctgatctat cacgtaggac
     1741 tcgcgaccgc cgccacactc tatcgcaagc ttccttacga tacgaagtcg gcattcgcgg
     1801 cgatcggcct cgttacggag gcgccgatga cgatcatcgg ccggctcgac ctgccgccgg
     1861 attcgctcaa ggatctcgtc gcgtacctca agggggcggg cgctaagact accgtggcca
     1921 atgcgggcat cggctcggcc tctcatctgt gcggtatgtt gctgatgtcg cagttgcagg
     1981 tgacgctgac gacggtgcct tatcgcggca ccggccctgt gatgaacgat ctcctcggta
     2041 agcaggtcga catgacctgc gaccaggcca ccaacacgac cggcccgatc ctgagcaagc
     2101 aggtgaaggc ttacgccatc accacgaaat cgcgcctgcc ttcgctgccc gagcttccca
     2161 ccgccgacga agccggtctc aaaggcttcg agctcgcggt ctggcacggc gtgttcgcgc
     2221 cgcgtggcac gccccccgcg atcgtggaaa agctttccat ggcgctgatc ggcgcgttaa
     2281 aagatcccga tctggtgaag cgcttccgcg agatcagcac cgagccgatg tccgccgaca
     2341 aggctacgcc ggaagctgcg cagcgcactc tcacaagcga gatcgaccgc tgggcgccga
     2401 ttatcaaggc ggccggcgaa tacgcggact agtcccgatc cggcctaagc gctgactgct
     2461 gcgcgcgccg cgagcggcca cgcggctgcc gcgccgccaa gcaatctgaa aaactggcgt
     2521 cgtctgaggt cgggcatggg ctcctccccg ga
//
LOCUS       DATCWM010000675         3375 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_274978, whole genome shotgun sequence.
ACCESSION   DATCWM010000675 DATCWM010000000
VERSION     DATCWM010000675.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3375)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3375)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3375
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_274978"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..329)
                     /locus_tag="VIQ50_13275"
     CDS             complement(<1..329)
                     /locus_tag="VIQ50_13275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEY9361401.1"
                     /translation="MIGAHRRFSPLQRLLHWLMAACILAMLFIGVGMVSTVMPKYLTL
                     VAIHKPLGIAILALALIRLAVRLRYGAPPLPADLPEPMKLAAVGSHYALYALMIAMPL
                     LGWGMLSA"
     gene            complement(326..1375)
                     /locus_tag="VIQ50_13280"
     CDS             complement(326..1375)
                     /locus_tag="VIQ50_13280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013947192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase family peroxidase"
                     /protein_id="HEY9361402.1"
                     /translation="MTAPHQSLPLGSLALIAAFVVAVAAAFAYTAGWFSPQRLTPGKL
                     VDAFAPPSGAALGHRRNHAKGICFTGVFEANGAGSELSLAPVFVRGQYPVLGRFNLGT
                     ANPNAADATVRVRGLGLRISTPDGQQWRSAMINAPVFPVSTPQIFYELLRAEGSKEAN
                     AVATFAAANPEFAPFGDWAKNGPWTGSYAEERYNSLNSFVFVDGSGAQHVVRWSLLPA
                     AQPVAVSTDELAKRGPNFLEQEIAQRVAGAPQRWTMVVTVANPGDPTADPTKAWPADR
                     RSVEVGTLVAQQVEAEPDGPCRDINFDPTVLPSGMRTSDDPFPAARSAAYAKSYDLRT
                     AEAKDYPRTTTGATP"
     gene            complement(1582..1971)
                     /locus_tag="VIQ50_13285"
     CDS             complement(1582..1971)
                     /locus_tag="VIQ50_13285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY9361403.1"
                     /translation="MGELTTIEAKAYVPAKDFVLSKQFYQDLGFEVAWSSDDLAYVRK
                     GSSSFLLQRFYNKEHADNFMMHLLVEDVEAWWSHVQAQGLIDKYGVWAEPPADRSWGL
                     RDFVIVDPSGVLWRIGQNIDEPSRESA"
     gene            2131..3315
                     /locus_tag="VIQ50_13290"
     CDS             2131..3315
                     /locus_tag="VIQ50_13290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019905791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEY9361404.1"
                     /translation="MTEDTPPAVPASYDKKVGLVLQGGGALGSYQAGVYEALAASDYM
                     PDWVAGISIGAVNAAIIAGNAPKDRVDRLRGFWEEITAPTMLWPHASGALAAWQRWAS
                     AAMAIAFGQPGFFGPHPRAWPPSDKCTSYYSTSALKATLERLVDFDRINAGKDMRLSV
                     GAVNVRTGDFAYFDSSDMTIRPEHVMASGALPPGFPPVEIDGEQYWDGGLFSNTPLQY
                     MVDYYPRRSRLIFQVDLFPARSRKHPTNLDEVHERDKDIRYSSRTRLTTTMLCERHDV
                     RHMINELHKLLPPEIASTEQAERLCKHGCVTTMDIVQMIYRPDEPQGSWKDFEFSRPT
                     MALRWQQGVADARATLQASPWLAPMPSEIGVRVFDVIHDLLKRKDALADRPPSPKVLP
                     VR"
BASE COUNT          652 a         1067 c         1061 g          595 t
ORIGIN      
        1 gccgacagca tgccccagcc gagcagcggc atggcgatca tcagggcgta caaggcgtaa
       61 tgcgacccca ccgcggcgag cttcatcggc tcggggaggt cggcaggcag cggcggcgca
      121 ccataacgca ggcgcacagc caaacggatc agcgcgagcg ccaggatggc gatgccgagc
      181 ggcttatgga ttgcaacgag cgtcagatat ttcggcatga ccgtggacac catgcccacg
      241 ccgatgaaca gcatggccag gatgcaggcc gccatgagcc agtgcagcag acgctgcaac
      301 ggggagaagc gccggtgagc cccgatcatg gcgtggctcc cgtcgtcgtt cggggatagt
      361 ccttggcctc cgccgtgcgc aggtcgtaag actttgcata ggcggccgag cgcgcagcag
      421 ggaacggatc atccgacgtg cgcatgccgg agggcagcac ggtgggatcg aaattgatat
      481 cgcggcatgg gccgtccggc tcggcctcga cttgctgcgc cacgagcgtg ccgacctcga
      541 cgctgcggcg atcggcaggc caggccttgg tggggtcggc ggtcggatcg ccgggattag
      601 ccaccgtcac caccatggtc caccgctgtg gcgcgccggc gacgcgctga gcaatctcct
      661 gttcgaggaa attgggaccg cgcttggcga gctcatcggt cgagacagcg accggttgcg
      721 ccgctggcag caacgaccag cgcaccacgt gctgtgcgcc ggaaccgtcg acgaagacga
      781 agctgttgag gctgttgtag cgctcttccg catagctgcc ggtccagggc ccgttcttgg
      841 cccagtcgcc gaacggcgcg aactccggat ttgccgcggc gaacgtcgca accgcgttcg
      901 cctccttgct cccctccgcg cgcagcagtt cgtagaagat ctgcggtgtc gagaccggga
      961 agaccggggc attgatcatg gcgctgcgcc attgctggcc gtcaggcgtc gatatccgca
     1021 gtcccaggcc gcgcacccgg acggtcgcat ccgccgcgtt cggatttgcg gttcccaggt
     1081 tgaagcgccc aagcaccgga tactgtccgc gcacgaaaac cggagccagc gagagctcgg
     1141 atcccgcccc gtttgcttcg aagaccccgg taaagcagat ccccttcgca tggttgcggc
     1201 ggtggccgag cgccgctccg cttggcggcg caaatgcatc gaccagcttg ccaggcgtca
     1261 ggcgctgagg cgaaaaccac cccgccgtat aggcaaaggc cgcggcaacc gcgacaacga
     1321 aggcggcaat caacgccagt gacccgagcg ggagcgattg gtggggcgct gtcattgagg
     1381 actcgctata tggccgacaa gccttccact gcggcaaaat ctctattcag cagtgcgtgc
     1441 attgccggcc ttgtccaacg gtatggcgag aagcagcgat tggatgattg catcttatcc
     1501 caagcaaaga tttgtgaaaa ttgctgcgca tatttcgacc ttgcgctgag ctttcaaccg
     1561 ccagccaagc cggcggaccc cctaagcgct ctctctagat ggctcgtcaa tattttgccc
     1621 gatgcgccac aggacgccac tcggatcaac gatcacgaag tcgcggagac cccatgacct
     1681 gtccgccggc ggctccgccc acacgccgta tttgtcaatc aatccttgcg cttgaacgtg
     1741 gctccaccaa gcctcgacgt cctcaacgag caaatgcatc atgaagttgt cggcgtgctc
     1801 cttgttgtag aatctttgca agaggaaact tgaacttccc ttacggacat aagccagatc
     1861 gtctgaggac caagcgacct caaagcccag gtcctggtag aattgcttgg acagaacgaa
     1921 gtctttggcc ggcacgtacg ctttggcttc aatcgtcgtc aattcgccca tgggtgctca
     1981 atcccgattg cgcatggtcc agggccgaaa gccgcccggc ggtcggccgc aaatatctca
     2041 gcaagcactc cggtttcaat tgcggcatag acaccttgac cgacgcgacg cggcaagcaa
     2101 gagctgtcag ctgcttgcgg agaggtgctc atgaccgaag atactccgcc ggccgtgccg
     2161 gcatcctatg acaagaaggt tggcttggtc ctgcaaggcg gcggcgcgct cggcagctat
     2221 caggccggcg tgtacgaggc gctggcggcc tccgactata tgccggattg ggtcgcgggg
     2281 atctccatcg gcgcggtcaa tgcggcgatc atcgccggca atgcgccgaa ggatcgcgtc
     2341 gatcgcttgc gcggcttctg ggaggagatc accgctccga ccatgctgtg gccgcacgcg
     2401 agcggagccc tggctgcctg gcaacggtgg gcaagcgcgg cgatggcgat tgcgttcggt
     2461 caacccggct ttttcggccc gcatccccga gcctggcctc catccgacaa gtgcacgagc
     2521 tactactcga catcggcgct caaagcgacg ctggagcggc tcgtcgattt cgaccgcatc
     2581 aatgccggaa aggacatgcg gctgagcgtc ggcgcggtca acgtccggac cggcgatttc
     2641 gcctatttcg acagcagcga tatgacgatt cgccccgagc acgtcatggc cagcggtgcg
     2701 ttgccgcccg gttttccccc ggtcgagatc gatggcgagc agtattggga tggaggcctc
     2761 ttctccaaca ccccgctgca atacatggtg gactattatc cacgccgcag tcggctgatc
     2821 ttccaggtcg acctgtttcc ggcgcgttct cgaaagcacc ccaccaacct tgacgaagtg
     2881 cacgagcgcg acaaggacat ccgctattcc agccggacgc ggcttaccac cactatgttg
     2941 tgtgaaaggc acgacgtgcg acatatgatc aacgaattgc ataagctgct gccgcccgag
     3001 atcgcgagca ccgaacaggc cgagcggctc tgcaaacacg gttgcgtcac gacgatggac
     3061 atcgtgcaga tgatctaccg cccggacgag ccgcagggct cctggaagga tttcgagttc
     3121 agccgtccga cgatggcgct gcgctggcag cagggcgtcg ccgatgcgcg ggccacgttg
     3181 caagcctccc catggctcgc gccgatgccg agcgagattg gggtgcgcgt gttcgacgtg
     3241 atccacgatt tgctgaagag aaaggacgcg cttgcggaca ggccgccatc gccgaaggtt
     3301 ctgccggtgc gatgactggg gccgatcctc ccgatttccc cagcgatcca cgatgcggct
     3361 cggaagcctc gataa
//
LOCUS       DATCWM010000676         5040 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_479984, whole genome shotgun sequence.
ACCESSION   DATCWM010000676 DATCWM010000000
VERSION     DATCWM010000676.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5040
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_479984"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            172..1056
                     /locus_tag="VIQ50_13295"
     CDS             172..1056
                     /locus_tag="VIQ50_13295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEY9361405.1"
                     /translation="MKPAPYGPFPYSPIVRRPRLSWPDGAHVALWVIPNIEFFSLMEK
                     VPAGSGGPGIPVPDIPSWSTRDYGNRVGVFRLMRVLARHGIRATVALNSDLCVHHPEI
                     IEEGRKLDWEWMGHCESNTRRLNEAPPGEEKAIIRRALTTIAEATGAQPLGWLGSGLQ
                     ETWDTLDLLAAEGCEYVCDWTNDEQPYVMSVDGGRQLISVPYSHEINDKPVFERLHRT
                     ANEFRDMICRQFDVLYREGAESGRVMAIALHPYLTGVPHRIDALDAALAYIGNHVRVW
                     KATGAEIARHYRAQIAKQ"
     gene            1073..2044
                     /locus_tag="VIQ50_13300"
     CDS             1073..2044
                     /locus_tag="VIQ50_13300"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9361406.1"
                     /translation="MGRWPRNALAALLAVAPMAVAPIASAETVTVGLVGAVSSTHWPV
                     YIGLAKGYFAAEDVKPDLVFIQSSAALVQQLTGGSLDLALSTGLADPIRAIDKGSPVA
                     IVRIEMQAPPYALLAKPAIKRWADLKGKTISIGGPKDITRIYLERMAAPNGLKTGEYD
                     TVFAGATSARFSALQSGAVDAAILLPPFNFYAESAGFTNLGLTIDYAKELPFSGTVLG
                     RAWASARKPTLDKVLSVNSKSMAWFSDPANRAEAIKIMVEASRLKEEDVARSYDFLHK
                     NEFFETSGRISRTKLGALLNALKGLGDIEGSTDIDRFVLPGVTQLTD"
     gene            2074..2865
                     /locus_tag="VIQ50_13305"
     CDS             2074..2865
                     /locus_tag="VIQ50_13305"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9361407.1"
                     /translation="MQRGAGSRLGSRIGSPRLYFAGVLSVLGGLLVWELASRFVVANA
                     LFLAAPSQIFAAIAALAKSGELWQHMSISAIEFALGYAIASVLGMIIGFAMAESAVMK
                     RVLQPWISGLYATPTIALAPLFILWLGIGIWSKVLVVIFLVLFPVTINTEAGLRTTSE
                     RLIEMLRSFGATPRQIFFKVSLPSAVPFILAGLKLGIGRGLIGVVVAELFGSRAGLGR
                     LIAQSADAFNMPDLFAGVIVLAAAGIALTAGFGWLENRLVPWTKD"
     gene            2872..3648
                     /locus_tag="VIQ50_13310"
     CDS             2872..3648
                     /locus_tag="VIQ50_13310"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009450620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9361408.1"
                     /translation="MAPKLQISHLGKSFGELQALHDINLAIERGDFIAVVGPSGCGKT
                     TFLRIVAGLEPASSGEVELDGRAVTGPGGDRGFVFQTDNLLPWRTVFANAIIGREVAG
                     RVGPAERRRTLELLKLVGLEGFENYHPRQLSGGMRQRVNLARALAIDPQVLLMDEPFS
                     SLDAQTREIMQTELMRIWEAGRKTVLFVTHQIDEAVFLADRVLVFARRPGRLRESVAI
                     ELPRPRTLAIKRRADFVRYVDHIWRLIEDDVRASVIEEKV"
     gene            3742..4734
                     /locus_tag="VIQ50_13315"
     CDS             3742..4734
                     /locus_tag="VIQ50_13315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9361409.1"
                     /translation="MTEIGVTRRQVSTALASAAALGVLPVCARGEQTYPARPVRFILP
                     FAAAGVADITARVAAEKLGDRLGQRFVVENQPGPGGIAAARAVLSQQPDGYTIGLVTN
                     GTSISAAIYKALPFDPVKDFATISTIGAFDLVFACNVDSEFKTFSDFINASQAQPGKL
                     NVGTINVGGTQNLAAELLKASAGLNFQIIPYRGTPDVIVALLRNDVQLMVDFYAPMKS
                     TLLDNKIRAVATTGKERSPFFTDVPTVAEAGVPGYEVVSWNGVFAPHGTPAQIIDILN
                     KAIREIVDTAEVKQRYAELGIEARAGTPEELKARLAADIGKWAAVIERAGIPKQ"
BASE COUNT          872 a         1582 c         1627 g          959 t
ORIGIN      
        1 cgtgcgcaag acttcggctc gttctgccta catgcccagg cgcgtgcggc aggcccgcct
       61 cttggccgca acggttgcgt cgcttagtgt cttgaacctt gcaccctgag tggagagcac
      121 gtgggtcatg tcgggcggca gaatcttcgg accgcgattg caaggcaggc gatgaagccc
      181 gccccgtatg gtccatttcc ctattcgccg attgtccggc ggccacggct gagctggccg
      241 gatggtgccc acgtcgcgct ctgggtcatc cccaatatcg agttcttctc gctcatggag
      301 aaggtgccgg cgggctcggg cggtcccggc atcccggtgc cggacatccc gtcatggtcg
      361 acgcgggact atggcaatcg cgtcggcgtg ttccggctca tgcgggtgct cgcccgccat
      421 ggcattcgcg ccactgtcgc gctcaacagc gacctgtgtg tccaccaccc cgagatcatc
      481 gaagaaggtc gcaagctgga ttgggagtgg atgggccact gcgagagtaa cacgcgccgg
      541 ctcaatgagg cgccgccggg cgaggagaag gcgatcattc ggcgcgcgct gacgaccata
      601 gccgaagcga ccggcgcgca gccgctgggt tggctgggct ccggcctaca ggaaacttgg
      661 gatacgctcg acctgttggc ggcggaaggc tgcgagtatg tctgcgactg gaccaacgac
      721 gagcagcctt atgtcatgag cgtcgacggc gggcggcagc tcatctcggt gccctacagc
      781 cacgagatca acgacaaacc ggtgttcgag cgcttgcacc gcaccgccaa cgaattccgc
      841 gacatgatct gccggcagtt cgacgtcctc tatcgcgaag gcgcggaatc gggccgcgtc
      901 atggcgatcg cgctgcatcc ttatctgacc ggcgtgccgc accgtatcga tgcgctcgac
      961 gcggcgctcg cctacatcgg caaccacgtc cgggtttgga aggcgaccgg tgccgagatc
     1021 gcgcggcatt atcgcgcgca aatcgccaag caatagcggg gtagagatgg gcatgggtcg
     1081 atggccgaga aacgcgcttg cggcgctgct cgccgttgcg ccaatggctg tagcgccgat
     1141 agcgtcggcg gaaaccgtga ccgtcggcct ggtcggggcg gtctcttcga cgcattggcc
     1201 ggtttatatc gggctcgcca agggatattt cgccgccgag gatgtgaagc ccgacctcgt
     1261 cttcatccag tcgagcgcgg cgctggttca acagctcacc ggcggctccc tcgatctggc
     1321 cttgtcgacc ggccttgcgg atccgatccg cgccatcgac aagggctcgc ccgtcgccat
     1381 cgtgcggatc gagatgcagg ctccgcccta cgcgctgctg gccaagcctg cgatcaagcg
     1441 ttgggcggat ctcaagggca agacgatatc gatcggcggc cccaaggata tcacacgcat
     1501 ttatctcgag cgcatggcgg ctccgaacgg actgaaaacc ggcgaatacg acaccgtgtt
     1561 cgcgggtgca acctcggcgc gcttctcggc gctgcaatcg ggcgcggtcg acgccgccat
     1621 cctgcttccg ccgttcaatt tctacgccga gtcggcaggc tttaccaatc tcggcctgac
     1681 catcgattac gccaaggagc tgccgttcag cggcacggtc ctcggccggg cctgggcgtc
     1741 ggcgcgcaag ccgaccctcg acaaggtgct ctcggtcaac agcaagagca tggcctggtt
     1801 ctccgatccg gcaaatcgcg ccgaagccat caaaatcatg gtggaggcaa gcaggctcaa
     1861 ggaggaggac gtcgcccggt cctacgattt ccttcacaag aatgaattct tcgaaactag
     1921 cggcaggatt tccaggacga agctgggcgc gctgctcaac gcgctcaaag ggctcggcga
     1981 tatcgaaggc tcgactgata tcgaccgttt cgtcttgccg ggcgtaactc aactgacgga
     2041 ctagcccggg tgagcggcgt cgagagatgg gccgtgcagc ggggagcagg atcgcgcctg
     2101 ggctcgagga tcggctcgcc gcgtctctat ttcgcgggcg tgctttccgt tctcggcgga
     2161 ctgctggtct gggagctggc gagccggttc gtcgtcgcca atgcgctctt tctcgccgcg
     2221 ccctcgcaga ttttcgcggc catcgcggcg ctcgcgaaga gcggcgagct gtggcagcac
     2281 atgtcgatca gcgcgatcga gtttgcgctc ggctacgcga tcgcgagcgt gcttggcatg
     2341 atcatcgggt tcgccatggc ggaaagcgcg gtcatgaagc gcgtgttgca gccctggatt
     2401 tcgggcctct atgccacgcc gacaatcgcg ctcgcccctt tgttcattct ttggctcggg
     2461 ataggcatct ggtccaaggt gctggtggtg atttttctcg tgctgtttcc ggtgaccatc
     2521 aacaccgagg ccggcctgcg cacgacaagc gagcggctga tcgagatgtt gcgctcattc
     2581 ggcgctacgc cacggcagat tttcttcaag gtgtcgctgc cctcggcagt gccctttatt
     2641 cttgccgggc tcaagctagg aatcggccgt gggctgatcg gcgtcgtcgt ggcggagctg
     2701 ttcgggtcac gcgccggact ggggcgcctg atcgcccaat cggcggatgc tttcaatatg
     2761 ccggatctct ttgccggcgt gattgtgctc gcagccgccg gcatcgcgct gacggcgggc
     2821 ttcggctggc tcgaaaatcg gcttgtgcct tggaccaagg attaaagtca cttggcgccg
     2881 aagctgcaaa tttcccacct cggcaagtcg ttcggcgaat tgcaggcgct gcacgacatc
     2941 aatctcgcga tcgagcgcgg cgatttcatt gccgtcgtcg gcccctcggg ctgtggaaag
     3001 acgacgtttc tgcgcatcgt cgccggcctc gagccggcga gctccgggga ggtcgagctc
     3061 gacgggcgcg cggtcacggg accaggcggg gaccgcggct tcgtgttcca gaccgataat
     3121 ctcctgccgt ggcgcacggt gtttgccaac gcgatcatcg ggcgcgaggt cgcaggtaga
     3181 gttggcccag ccgagcggcg gcgcacgctg gagctgttga agctcgtcgg cctcgagggc
     3241 ttcgaaaact atcatccgcg ccagctgtca ggcggcatgc gtcaacgggt caatctcgca
     3301 cgtgcgctgg ccatcgatcc gcaagtgctg ctgatggacg agcccttctc ctcgctcgat
     3361 gctcagaccc gcgagatcat gcagaccgag ctgatgcgta tctgggaagc cgggcgcaag
     3421 accgtcttgt ttgtcacgca tcagatcgac gaggcggtgt ttctggccga ccgcgtgctc
     3481 gtcttcgccc gccggccagg ccggctgcgc gagagcgtcg ccatcgagct gccgcgcccg
     3541 cgcacactcg cgatcaaacg cagggctgac ttcgtgcgct acgtggatca catttggcgg
     3601 ctgatcgagg acgacgtgcg cgcaagcgtc atcgaagaga aggtgtgacg ttgcgacgca
     3661 tgttgcatga attgcagggc cgtggttgat ccagcaacaa gtccggagga ccgcttcgag
     3721 atgcaacgaa caggaaaccg catgacagag atcggcgtca cccgacggca agtctcgacg
     3781 gcgctcgctt cggctgcggc cctcggagtg ttgccggtct gtgcgcgtgg tgaacagact
     3841 tatcccgccc ggccggttcg gttcatcctg ccgtttgccg ccgcgggcgt cgcggacatc
     3901 actgcccgcg tggcggctga aaagctcggc gacagactcg ggcaacgctt cgtggtggaa
     3961 aatcaacctg gccctggcgg catcgcggcg gcgcgcgccg tgctgtcgca gcagcccgac
     4021 ggctatacca tcggcctcgt caccaacggc acctcgatca gcgccgccat ctacaaggca
     4081 ctgccgttcg atccggtgaa ggattttgcc acgatctcga ccatcggcgc gttcgatctc
     4141 gttttcgcct gcaacgtgga ctccgagttc aagacgttca gcgatttcat caatgcgtcg
     4201 caggcgcagc ccggtaagct caatgtcggc accatcaacg tgggcgggac gcaaaacctt
     4261 gcggccgagc tgctcaaggc ctcggcgggg ctcaacttcc agatcatccc ctaccgcggc
     4321 acgcccgacg tcatcgttgc tcttctgcgc aacgacgtgc agctcatggt cgatttctac
     4381 gccccgatga aatctacatt gctcgacaac aaaatccgcg cggttgccac caccggcaag
     4441 gaacgctcgc ccttcttcac cgacgtgccg acggtcgccg aagccggagt cccgggatac
     4501 gaggtcgtct cgtggaacgg agtgttcgct ccgcatggca cgccggcgca gatcatcgat
     4561 atcttgaaca aggccattcg cgaaatcgtg gatactgccg aggtgaagca gcgctatgcc
     4621 gagctcggga tcgaagccag ggccggcacg ccagaggagt tgaaggcgcg gcttgccgcc
     4681 gatataggca agtgggccgc ggtgatcgag cgcgccggca ttccgaagca gtagcggcat
     4741 caacctggct tggcgttggc gcggacacaa caagcatttg tgaacagcgc gtgaaacacg
     4801 ctcggcaaat gcccaggagt agcaccgcat tcgcgcgctc gagcaatctc tttttattgt
     4861 ccagacgggc cacctatata gcctccatct atggatgtga cggcggcata gtagcggccg
     4921 cgccggggcg ccgaatgtga tggtcctctg gagcgcgcta gcggtctgcg tcatcggcgc
     4981 gctctcctac gatatggcca attggttcgc ggcctggtga tccgcctctc gtgcaccgcg
//
LOCUS       DATCWM010000677         5301 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_145575, whole genome shotgun sequence.
ACCESSION   DATCWM010000677 DATCWM010000000
VERSION     DATCWM010000677.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5301
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145575"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            86..277
                     /locus_tag="VIQ50_13320"
     CDS             86..277
                     /locus_tag="VIQ50_13320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361410.1"
                     /translation="MTKNNAAQSRENARRDAPNLDSRYGQIGISAVAAALPYQSEGKN
                     PAYAPAEQNVEKWIADKAA"
     gene            489..1466
                     /locus_tag="VIQ50_13325"
     CDS             489..1466
                     /locus_tag="VIQ50_13325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014497229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HEY9361411.1"
                     /translation="MLWVYVPRGASLERMPITSGAAVAENAIWFDLVNPNLEEDKVVE
                     RQVGISIPTREEMQEIEVTSRLYSENGASYMTATLMCQSDTLTPKTTPVTFILSGHRL
                     ITVRYDEPRPFMIVGNKLARICPPAVTGEAVLMDLLDAVIDRAADILERVGSEVDQIS
                     HDIFESEAEGADRTRSYNEILKAIGKKGDLASKVRESLVSIGRLLLYLANEADSMRWA
                     KEARAQLRGMQRDVHSLSDHAAYLSNKIQFLLDAMLGVVTIEQNNVIKIFSVAAVALM
                     PPTLIASIYGMNFRHMPELDWQLGYPIAIVLMLLASALPYFFFRWKKWL"
     gene            complement(1525..2280)
                     /locus_tag="VIQ50_13330"
     CDS             complement(1525..2280)
                     /locus_tag="VIQ50_13330"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY9361412.1"
                     /translation="MATPHSNQPRRALLLTGASRGIGHATVKRFSAAGWRVITCSRHP
                     FPENCPWEMGPEDHIQVDLADPERTLHAIAEIKQRLEDGELHALVNNAAISPKADGGK
                     RLSSIDTTIDVWDHVFRVNFLAPIMLARGLLEELKAAKGSVVNVTSIAGSRVHPFAGA
                     AYATSKAALAALTREMAADFGPLGIRVNAIAPGEIDTSILSPGTSEIVAHQIPMHRLG
                     TPDEVAKIIYVLCTETSSYVNGAEIHINGGQHV"
     gene            complement(2378..3019)
                     /gene="pdxH"
                     /locus_tag="VIQ50_13335"
     CDS             complement(2378..3019)
                     /gene="pdxH"
                     /locus_tag="VIQ50_13335"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HEY9361413.1"
                     /translation="MSESASIEHPSGLTGGDLIEADEPLRLFAAWFEQAARSEPRDPT
                     AMSLATVDADGLPNVRMVLMKGFGESGFVFYTNVDSQKGHELDREQKAALLFHWKSVN
                     RQVRLRGPVERIEDAEADAYFATRPRLTQVGAWASKQSAPLESRHAFEKAIAYYTARF
                     ALGTVPRPPNWTGYRLRPLLIEFWHERPFRLHDRLEFRREALDGPWRKARLYP"
     gene            3106..3543
                     /locus_tag="VIQ50_13340"
     CDS             3106..3543
                     /locus_tag="VIQ50_13340"
                     /inference="COORDINATES: protein motif:HMM:NF028308.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RT0821/Lpp0805 family surface protein"
                     /protein_id="HEY9361414.1"
                     /translation="MAVRWLATGPWLLVLALTGGGCSLAYRLDTTLGKRDGADQADSP
                     RSVSPNATAAVPSESDLAMARAAVSEVLIKGATSVPWENPKTGTRGTVTPLASLYSQN
                     GIACRDFLASFVKNGSESWLQGAACRAKRGTWEVRNLRPWSNS"
     gene            3771..4742
                     /locus_tag="VIQ50_13345"
     CDS             3771..4742
                     /locus_tag="VIQ50_13345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HEY9361415.1"
                     /translation="MRDPYDVLGVSKTASVAEIKSAFRRQAKKLHPDANKHDPRAAAR
                     FAELNTAYEILGEESKRKSFDRGEIDAEGKPRFQGFEGFTRGRGQGGFNSEDVFETFS
                     WGRDGYQHTRGRGGFGGLGGFEDILKEAFGGASRSGRPGGFQFEREDLSRSGQDITAA
                     LTITLAEAATGAHKRVQLPTGREVEVKIPPGLNDGQTIRLKGLAGAGRAGDLLITVSV
                     APHPLFARAGADLRLEIPITLYEAVLGAKVRVPTLDGAVELAIPAGTSSGRTFRLKGK
                     GFPAKEGKGDLLATVRIMLPEGGDAELEELMRRWRKAKPYDPRKGIG"
     gene            complement(4772..>5301)
                     /locus_tag="VIQ50_13350"
     CDS             complement(4772..>5301)
                     /locus_tag="VIQ50_13350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007607379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="anti-sigma factor"
                     /protein_id="HEY9361416.1"
                     /translation="AAAVVLAFLTGGVVGWMAHGASAAAPSRFDTFTAQALEAHKVYV
                     VEVRHPVEVTGGERPHLVQWLSKRLDYELRIPELEPSGLKLVGGRLLPGPFGPAAFCM
                     YEGPSGERFTIYYARTDSPQTAMRYREGDRFAALYWVERGLAYVVSGPPERERLLSIA
                     QAAYDQIDKSTPQAK"
BASE COUNT         1001 a         1632 c         1747 g          921 t
ORIGIN      
        1 tttcgagcgc gcgcgaacgg cgccaagagc aaacgaagaa gaggaagagt aagtgacctc
       61 aaagagagtc cccacggagc agcaaatgac caagaacaat gcggcgcaat cacgcgagaa
      121 tgcccgccgc gacgcgccaa acctcgacag ccgctatggc caaatcggaa tatctgcggt
      181 tgcggccgcg ttgccatacc agagcgaggg caagaacccg gcttacgcac cagccgagca
      241 gaacgtagag aagtggatcg ccgacaaggc agcctgatca actcgcctgc ggctcgccgc
      301 cagctgccgc cagcattcct agtcgcagtc ggtccaccac ccgcaggggt cggcgctacc
      361 gcttgcgcta cctgctcatt gtccttgcaa ggtgagcctt aattgggcca tcactggccc
      421 aatcaaggcc caagcgcgca tcgcgcttgc ccggcggact tggatgcgcg gggatcggcg
      481 gagggttcat gctgtgggtc tatgtcccgc gcggcgcatc gcttgagcgc atgccgatca
      541 catcgggtgc ggccgtcgct gaaaacgcga tctggttcga cctcgtcaac cccaacttgg
      601 aggaagacaa ggtcgtcgag cgtcaagtcg gcatatccat tcccacccgc gaagaaatgc
      661 aagaaatcga agtcacgagc cggctctact cggaaaatgg cgcgagttac atgacggcga
      721 cgctgatgtg ccagtcggat accctgacgc cgaagacgac gccggtgacc ttcatcttgt
      781 ccggccatcg gctcatcacc gtgcgttacg acgagccgcg tccgttcatg atcgtcggca
      841 acaagcttgc gcggatttgc ccgccggccg tgaccggaga agcggtgttg atggacctgc
      901 tcgatgcggt catcgatcgt gcggcggaca ttctggaacg cgtcggttcc gaggtcgatc
      961 agatatcgca cgacatcttc gagtcagagg ccgaaggtgc cgatcgcacg cgcagctaca
     1021 acgagattct caaggcgatc gggaaaaaag gcgatctcgc ttccaaggtg cgtgagagcc
     1081 tcgtgtcgat cgggcgtctg ctgctctacc tcgccaacga agcggacagc atgcgatggg
     1141 cgaaagaggc gcgtgctcaa cttcgcggaa tgcagcgcga cgtacactcg ttgtcggacc
     1201 atgccgccta tctttcaaac aaaattcagt tcctgctcga tgccatgctc ggggtggtca
     1261 cgatcgagca gaacaacgtc atcaagatat tttcggtagc ggccgtggcg ctgatgccgc
     1321 cgacgctgat tgcgtcgatc tatggcatga atttcaggca catgcccgag ctcgattggc
     1381 agctggggta tccaatcgct attgtgctga tgctgctcgc atccgctctg ccgtacttct
     1441 tcttcaggtg gaagaagtgg ctttgagccg aacgagcatc gccgaggcgg ggaggatcac
     1501 gctgagtcgc aggggccttt gtcctcagac gtgctgacct ccgttgatgt ggatctcggc
     1561 gccgttcacg taagacgagg tctcggtgca cagcacatag atgatcttgg cgacctcgtc
     1621 gggggtgccg aggcgatgca ttggaatttg atgggccacg atctccgagg tgccggggga
     1681 aagtatcgag gtatcgattt cgcccggagc gatggcgttg acgcggatgc cgagtggccc
     1741 gaagtcggcc gccatctccc gggtcagcgc cgcaagcgcg gccttcgagg tggcgtaggc
     1801 ggcgcctgcg aacggatgca cccgcgagcc ggcgattgag gtgacgttga cgaccgagcc
     1861 cttggcagcc ttgagctctt cgaggagacc gcgtgcgagc ataatcggtg caaggaaatt
     1921 cacgcggaac acgtggtccc aaacgtcgat ggtggtgtcg atcgaggaga ggcgcttacc
     1981 gccgtccgcc ttgggcgaga tcgcggcgtt attgacgagg gcgtgcaact caccgtcctc
     2041 gagccgctgc ttgatctcgg caatagcgtg gagcgtgcgt tcgggatcgg cgagatcgac
     2101 ctggatgtga tcctccggcc ccatttccca cgggcagttt tccggaaagg gatggcgcga
     2161 gcaggtgatg acgcgccacc cggccgccga aaatcgcttg accgtggcgt gcccgatccc
     2221 acggctcgcg ccggtgagca ggagcgcgcg gcgcggctgg ttcgagtgcg gcgtcgccat
     2281 ggagggtcga tccaaaaaag ctccgcaatg ctaaagggct ttgcgctccg gcgccattgc
     2341 ggtttccggc gctagccccg gttactgcag caagacctca cggatagagc cgagccttgc
     2401 gccagggccc atcgagcgct tcgcgacgga actcgagccg gtcatgcagc cggaacggcc
     2461 gctcgtgcca gaactcgatc agaagcggcc gcaggcgata gccagtccag ttcggcggtc
     2521 gtgggacggt tcccagggcg aatctcgcgg tgtagtacgc gatcgccttc tcgaacgcgt
     2581 ggcggctttc gagcggtgcc gactgtttgc tggcccaggc gccgacctgg gtcaggcgcg
     2641 gacgcgtcgc gaagtaagcg tcagcttccg cgtcttcgat tcgttccacc gggccgcgca
     2701 ggcgcacctg gcgattgacc gacttccaat gaaagagcag cgcggctttc tgctctctat
     2761 ccaactcgtg gcctttttgg ctgtcgacat tggtgtagaa cacgaacccc gactcgccga
     2821 agcctttcat cagcaccatg cggacattgg gcaggccgtc cgcatcgacg gtggccagcg
     2881 acatcgcggt gggatcgcgc ggctcgctgc gggccgcttg ctcgaaccag gcggcaaaca
     2941 ggcgcaaagg ctcatcggcc tcgattaaat caccgcctgt taacccgctg gggtgttcta
     3001 tcgaagctga ttcagacatt gcgcggagca atccggatgg tggcgtcgcc gccgagttcg
     3061 ctcgtccagc gggcttctta tagaggaagg cgggacgcat ttcacgtggc cgtgcgatgg
     3121 ctcgcgacgg ggccctggct gctcgtcctg gcgctcacgg gcggtggctg tagtcttgct
     3181 taccggctcg acaccacgct cgggaaacgc gatggcgccg atcaggcgga ctcgccccgc
     3241 tcggtgtcgc cgaacgcgac cgcagcggtg ccctccgaga gcgacctcgc catggcccgc
     3301 gccgccgtga gcgaagtctt gatcaagggc gccactagcg tgccctggga gaacccaaag
     3361 acggggacgc gtggcacggt cacgccgctt gcctcgctct acagtcaaaa tgggatcgcc
     3421 tgccgggact ttctagcaag cttcgtgaag aacggtagcg aatcctggtt gcagggcgca
     3481 gcctgccggg ccaagcgcgg gacctgggaa gtgcgcaatt tgcggccttg gagcaacagc
     3541 tagcggttgc ggccattccg gactgcgccg aaaggcgaac gggcacgcga cgaagccgag
     3601 ggctagagtc cgatccgaac ggaaggtgaa tcggcccgga ggtggtgccg gcgaccgctt
     3661 gccggtccgc gatctctcgt tgcgctcccg ggcagccccc accacattat tggcaggaac
     3721 tggggcgctg accggcataa aacctgcgac ctgcctggga gagactgagg atgcgtgacc
     3781 cctatgatgt ccttggggta tcgaagaccg cgagcgtcgc ggagatcaag agcgcctttc
     3841 gccggcaagc gaagaagctg cacccggacg ccaataagca tgacccgagg gcggccgcgc
     3901 gctttgcgga actaaacacg gcttacgaaa tcctcggcga ggagagcaaa cgcaagtcat
     3961 tcgatcgtgg cgagatcgat gcggaaggca agccgcgctt ccagggcttt gaaggtttca
     4021 cccgcggccg cggacagggt ggcttcaact ccgaggacgt tttcgaaacc ttcagctggg
     4081 gacgcgacgg ctatcaacac acgcgcggtc gcggcggatt tggcggcttg ggcgggttcg
     4141 aggatattct gaaggaggca ttcggcggcg cgtcgcgttc agggcggccg ggcggcttcc
     4201 agttcgagcg ggaggattta agccgctcgg gccaggacat cactgccgcg cttacgatca
     4261 cgctggcgga agcagcgaca ggggcgcaca agcgcgtcca attgccgacc ggtcgagagg
     4321 tcgaggtgaa aatcccgccc ggcctgaacg acggccagac cattcgcctc aaggggctcg
     4381 ccggcgccgg ccgtgccggc gaccttctca tcacggtctc ggtcgcaccg catccactgt
     4441 ttgcgcgcgc cggggccgat ctgcggctcg agattccaat cacgctctac gaagcggtgc
     4501 tcggcgccaa agtgcgcgtg ccgacgctcg acggcgcggt tgagctcgcc atccccgccg
     4561 gcaccagttc cgggcgcacc tttcgcctca agggcaaggg ctttcccgca aaggagggca
     4621 aaggcgatct gctcgccacc gtgcggatta tgttgcccga aggcggcgac gccgagcttg
     4681 aagaactcat gcgccggtgg cgcaaggcca agccctatga tccgagaaag gggatcgggt
     4741 aagcgcgcat gcccgtgcga tgccgtgtgc gttatttcgc ctgcggcgtg cttttgtcga
     4801 tctgatcata ggctgcctgc gcgatgctga gcaggcgttc gcgctcgggc ggtccgctca
     4861 ccacgtaagc gaggccgcgc tcgacccaat atagggcggc gaagcgatct ccttcgcggt
     4921 agcgcatggc ggtctgcggc gaatccgtgc gcgcgtagta gatggtaaag cgctcgccgg
     4981 aggggccttc atacatgcag aacgccgccg ggccgaacgg gccaggcaac aggcgcccgc
     5041 cgaccagctt cagtccgctc ggttcgagct ctgggatccg cagctcgtag tcgaggcgtt
     5101 tcgacagcca ctggaccaaa tgcggccgct caccacccgt gacctcgacc ggatgacgca
     5161 cctcgaccac gtaaaccttg tgggcctcga gcgcctgtgc ggtgaacgtg tcgaagcgag
     5221 aaggcgccgc cgccgatgcg ccatgcgcca tccagccgac cactccgccg gtgagaaacg
     5281 ccaggaccac tgccgcggcc g
//
LOCUS       DATCWM010000678         3897 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_226239, whole genome shotgun sequence.
ACCESSION   DATCWM010000678 DATCWM010000000
VERSION     DATCWM010000678.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3897)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3897)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3897
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_226239"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..562
                     /locus_tag="VIQ50_13355"
     CDS             <1..562
                     /locus_tag="VIQ50_13355"
                     /inference="COORDINATES: protein motif:HMM:NF044583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361417.1"
                     /translation="ILDTVCPLLQGSHKHATAYAIENGQLVIQLGSARAALARPQQFV
                     GFLGEPGAPSAILLRNHGLHLEIRIDRPVARDDSAGIVDVTLESAITTLVSVHDRRHH
                     FDHMVVAVYENEEWLILDDLTNLVLRDSEKRDYEPTAILDYRGARCYSLVGATRVILV
                     LHQTIRVVIDYRSPPASAGQGPHSPS"
     gene            complement(618..1286)
                     /locus_tag="VIQ50_13360"
     CDS             complement(618..1286)
                     /locus_tag="VIQ50_13360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEY9361418.1"
                     /translation="MFGRLGHLIKRFGLTDQSYRFLFEAEPENEAVSLDCETTGFDPW
                     ADEIVSIAAIRISSRRIHASSAYRALVKPEGAMRPTSIKVHQLRQQDVAQARPMSDVL
                     PELLHFIGSRPLVGYWIQFDVRMLNKYLLAMIDTRLPNRQIDVSRLYYDRKYGNAPPG
                     TRVDLRYAAIRADLKLPVRTQHDAFEDALGAAEMYLVLEDMRERGVRLWRQRTERQDA
                     FSMA"
     gene            complement(1286..3103)
                     /locus_tag="VIQ50_13365"
     CDS             complement(1286..3103)
                     /locus_tag="VIQ50_13365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012591614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF294 nucleotidyltransferase-like
                     domain-containing protein"
                     /protein_id="HEY9361419.1"
                     /translation="MPQSFDIHNPPFDRLSHGEANDLRAALDIGYFRPGEVIVERNAA
                     SDQLHVIIKGGVEERDGDEIEAKLGPKDSFDARAVVHGAAGSRFVAAEETLCYLVPRP
                     AILALIRGNPAFAAFFYSEISRKLDSYSRRQEPEGVESVLRARVRDARAHPAVFIDGA
                     ATIEAAGRLMRERDNNALFVRDGARTGIVTGMNLSKAVVLDHRALDTEVRAICHFDVV
                     AVEQDDFLFEALILMTRHSKRRLAVRANSSYIGVLEDIDILGLVAGNSQLVPGRIDRA
                     QDVDDLAQAAQDIGRQVERLARERVRVEAIAEITSDLNRRLVTRLFEVIAPPSIRDAG
                     CLMLMGSEGRGEQTVRTDQDNGLLLAAPVPDTDVVSFRAAFTAALERFGFPPCPGDVM
                     VRNPQWSQPVDDFIRQIKSWIMMPDESSAMNLGIFFDAVGVTGKVELVQRAKTAMVDM
                     MRGETAYLAHFARYIDQFAGASAGMLASIMASVGVGSDLIDIKKTGTFPIVHGIRTLS
                     IERGIMATQTTRRIAALVTDGVLGEELGRELASALSYFMEIRLRSQLRAVKSGQREME
                     SIVRLSELSTSDRDLLRDALRVVKRFREVIRHRYHLGLF"
     gene            complement(3192..>3897)
                     /gene="actP"
                     /locus_tag="VIQ50_13370"
     CDS             complement(3192..>3897)
                     /gene="actP"
                     /locus_tag="VIQ50_13370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015822922.1"
                     /note="member of the sodium:solute symporter family;
                     cotranscribed with the acs gene which encodes acetyl
                     coenzyme A synthase; mutations affect acetate uptake;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cation acetate symporter"
                     /protein_id="HEY9361420.1"
                     /translation="NDPSYFKVAADGAYNKITDILGGTNMAAIHLANAVGGSLFLGFI
                     SAVAFATILAVVAGLTLAGASAVSHDLYASVIAKGKVAEDKEVRLSKFAAIVIGIVAI
                     MLGYIFENQNVAFMVGLAFAVAASCNFPVLLTSMFWKGTTSRGALLGGFLGLISAVVM
                     VVLSPAVWVKTFGFKAALFPYDNPALFSMTIAFVGIWLFSKIDRSARARAERDAFEAQ
                     YVRSETGIGAAEALAH"
BASE COUNT          714 a         1245 c         1236 g          702 t
ORIGIN      
        1 aatcctggat acggtctgcc cgctgttgca aggcagccac aagcatgcga ccgcttacgc
       61 gatcgaaaac gggcaacttg tcatccagct cggcagcgcg cgcgccgccc tggcgcgccc
      121 gcagcagttc gtcggttttc tcggtgagcc aggcgcgcct tccgcgattc ttttgcgcaa
      181 ccacggcctg cacctggaga tcaggatcga tcgcccggtc gcccgcgacg attccgccgg
      241 gattgtcgac gtgaccttgg aatctgcaat cacgaccctt gtgagcgtgc acgatcgacg
      301 gcaccatttt gaccacatgg ttgtcgctgt ctatgaaaac gaagagtggc tcattctcga
      361 cgatttgacc aatctggtgc tacgagattc agagaaaaga gattacgagc cgacggcgat
      421 tttggactac aggggtgccc ggtgctactc tttggtggga gcaacgcggg tgattttggt
      481 gcttcatcaa actattcgtg tcgtcataga ttatcggtcg ccacctgcca gcgctggcca
      541 gggaccgcac tcgccttcgt gacttcgccc agctttctcg gccttttctc tctgtttggg
      601 ccgcggcact gtgtcactta ggccattgag aaggcatctt gacgctccgt tcgctgccgc
      661 cacagccgca caccccgctc ccgcatgtcc tcgagcacga gatacatctc ggccgcgccg
      721 agcgcgtcct cgaaggcatc gtgttgcgtc cgcacgggca atttgaggtc ggcgcggatg
      781 gcggcatagc gcaaatcgac ccgcgtaccg ggcggcgcat tgccgtattt gcgatcgtaa
      841 tagagccggg agacatcgat ctggcggttc ggcagtcggg tgtcgatcat ggcgagcagg
      901 tatttattga gcatgcgcac gtcgaattgg atccagtagc caaccaacgg acgtgatcca
      961 atgaaatgca ggagctcggg gaggacgtcg ctcatcgggc gggcttgcgc cacgtcctgt
     1021 tgccgcagct ggtgcacctt gatcgaagtc ggccgcattg ccccttccgg cttgaccaaa
     1081 gcccgatagg cggaactggc atgaatgcgc cggctgctga tgcggatggc cgcaatgctc
     1141 acgatctcgt cggcccaagg atcaaatccg gtggtctcgc aatcgagcga caccgcctcg
     1201 ttttcgggct cggcctcgaa caggaagcga tagctctggt cggtgagccc gaagcgcttg
     1261 atgaggtgtc caagccggcc gaacatcaga acagtcccag gtgatagcgg tggcggatca
     1321 cctcacggaa tcgcttcacc actcgcaagg cgtcacgcag aagatcgcga tcggaggtcg
     1381 agagctcgct cagccgaacg atggactcca tctcgcgctg gccgctcttc acggcacgca
     1441 attgcgaccg gagccggatc tccatgaaat aggagagcgc gctggccagc tcgcgcccga
     1501 gctcctcgcc gagcacgccg tcagtgacga gggcagcgat gcgcctggtg gtctgcgtgg
     1561 ccatgatccc gcgctcgatc gacagggtgc gaatgccgtg cacgatcggg aaggtaccgg
     1621 tcttcttgat gtcgatcagg tcgctcccca cccccacgct cgccatgatc gaggccagca
     1681 tgccggcgct ggcgccggcg aactggtcga tgtatcgcgc gaaatgcgcg agataggcgg
     1741 tctcgccccg catcatatcg accatcgcgg tttttgcgcg ctgcacaagc tcgacttttc
     1801 cggtcacgcc gacggcgtcg aagaagatgc cgagattcat tgcgctcgac tcgtcgggca
     1861 tcatgatcca gctcttgatc tgccggatga aatcgtcgac cggttgcgac cattgcggat
     1921 tgcggaccat tacgtcgccg gggcacggcg gaaagccgaa gcgctcgagc gccgcggtga
     1981 aagcggcgcg aaagctcacg acgtcggtgt cgggaacggg cgccgccagc agcagcccgt
     2041 tgtcctggtc ggtgcgcacc gtctgctcgc cgcgcccttc cgaccccatg agcatcaggc
     2101 agccggcgtc gcgaatcgag ggcggcgcga tcacctcgaa cagcctggtg acgagccggc
     2161 gattgaggtc ggatgtaatt tcggcgattg cttcgacccg cacccgctcg cgggcgaggc
     2221 gctcgacctg gcgtccgatg tcctgggccg cctgcgcgag atcgtccacg tcctgcgccc
     2281 ggtcgatgcg gccaggcaca agctgcgagt tgcccgccac cagcccgaga atgtcgatgt
     2341 cctcgagcac cccgatatag ctgctattcg ccctcaccgc gaggcgccgc ttgctgtggc
     2401 gcgtcatcag gatcagcgcc tcgaaaagaa aatcatcctg ctcgaccgcg accacgtcga
     2461 agtgacagat cgcccgtacc tcggtatcga gcgcgcggtg atcgagcacg accgccttcg
     2521 acaggttcat gccggtgacg atgccggtgc gcgctccgtc gcgtacgaat aaggcgttat
     2581 tatcgcgttc gcgcatcagg cgacctgcgg cctcgatcgt cgcggcgcca tcgatgaaca
     2641 ctgccggatg ggcacgcgcg tcgcgaacgc gcgcgcgcag gaccgattcc acgccttccg
     2701 gctcctggcg gcgcgagtag ctgtcgagct tgcgcgagat ctcggaatag aaaaacgccg
     2761 cgaaagccgg attgccccgg atcagcgcca ggatcgcggg acgcggcact agatagcaca
     2821 gtgtctcctc ggcggcgacg aagcggctgc cagcggcgcc gtgcacgacc gcgcgcgcat
     2881 cgaagctgtc cttgggtccg agcttggcct cgatctcgtc gccgtcgcgc tcctccactc
     2941 cgcccttgat gatgacgtgc agctgatcgg aggctgcatt gcgctcgacg atcacctcgc
     3001 cggggcggaa ataaccgata tcgagcgcgg cgcgcagatc gttggcctcg ccgtggctca
     3061 ggcgatcgaa cggcggatta tggatgtcga acgactgcgg catcacgcgg cccgctgagt
     3121 gtcattggcc gggcgccgct agtggggacc ccggccaacg cgatgacgca gcacgcgccg
     3181 ccttggcggc gtcagtgtgc gagcgcctcc gccgccccaa ttcccgtttc cgatcgcacg
     3241 tactgggcct cgaaggcgtc tcgctcggcg cgggcgcggg cgctccggtc gattttggag
     3301 aacagccaga tgcccacgaa cgcgatcgtc atcgagaaca aggcgggatt gtcatagggg
     3361 aagagtgcag ctttgaagcc gaacgtcttc acccataccg ccggactgag caccaccatc
     3421 accacggcgc tgatcagccc gagaaagccg ccgagtagcg caccgcggct ggtggtcccc
     3481 ttccagaaca tcgacgtcag cagcaccgga aagttgcagc tcgccgcgac cgcgaaggcc
     3541 agcccgacca tgaacgccac gttctggttc tcgaagatgt agccgagcat gatcgccacg
     3601 ataccgatga cgatggcggc gaacttggac agccgcactt ccttgtcttc ggccaccttg
     3661 cccttggcga tgaccgaggc atagaggtcg tggctcaccg cggaggcgcc ggcaagcgtg
     3721 aggccggcaa ccaccgcgag gatggtggcg aacgcgaccg ccgagatgaa gccgagaaac
     3781 agcgagccac cgacggcatt ggccaggtga atggccgcca tgttggtgcc accgaggatg
     3841 tcggtgatct tgttgtaggc gccgtcggcc gcgaccttga aatagctggg gtcgttc
//
LOCUS       DATCWM010000679         3152 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_479999, whole genome shotgun sequence.
ACCESSION   DATCWM010000679 DATCWM010000000
VERSION     DATCWM010000679.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3152
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_479999"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..409
                     /locus_tag="VIQ50_13375"
     CDS             <1..409
                     /locus_tag="VIQ50_13375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="laccase domain-containing protein"
                     /protein_id="HEY9361421.1"
                     /translation="IGAAHAGWRGAASGVLEATIAAMERCGADRARISVAVGPTIRQP
                     NYEVGPEFVSRFLVADAANERYFRPSTTSQHALFDLPGYIVARLTAAGIRAIEDLGHC
                     TYADAAQFFSYRRSTHRKERDYGRHVNAIALAG"
     gene            580..1533
                     /locus_tag="VIQ50_13380"
     CDS             580..1533
                     /locus_tag="VIQ50_13380"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_028174674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009165 - nucleotide biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HEY9361422.1"
                     /translation="MRPNNGAIKLVAGNSNPALADAIAAYLATPLTRAVVRRFADMEI
                     FVEIQENVRGTDVYVIQSTSFPANDNLMELLIIIDALRRASGRRVTAVIPYFGYARQD
                     RKPAPRTPISAKLVSNLITRAGADRVMTLDLHAGQIQGFFDIPTDNLYAAPMMVRDIK
                     ERFDVSKVMVVSPDVGGVGRARGLAKRINAPLAIVDKRRERAGESEVMNVIGEVEGYI
                     CILVDDIIDSGGTVVNAADALLDKGATEVCAYITHGVLSGGAVARITASRLKELVITD
                     SIQPTQAVKVAHNIRTLSVASLIGEAIGRTAAEESVSSLFD"
     gene            1843..2343
                     /locus_tag="VIQ50_13385"
     CDS             1843..2343
                     /locus_tag="VIQ50_13385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013651944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjN domain-containing protein"
                     /protein_id="HEY9361423.1"
                     /translation="MALIDFAQQPHDNPLEVVEQVASTNGWSFERAGEDEITILAAGK
                     WTDYQVSYTWMFDIEALHLACAFELKVPERCRGEVQQLISMINEQMWVGHFDLWTQDG
                     LVMYRHALVLTGGVEASGRQCEALLATALEACERYFPAFQFVVWAGKPARVALDATMF
                     DTQGQA"
     gene            2520..>3152
                     /locus_tag="VIQ50_13390"
     CDS             2520..>3152
                     /locus_tag="VIQ50_13390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase dimerization
                     domain-containing protein"
                     /protein_id="HEY9361424.1"
                     /translation="MSTPSTPEVRPLADLSHTILLAGAGKMGGALLQGWLALGLSPEK
                     VAVIEPLPSPELAALSKQGLRLNPPHDVVGAVAAVVVAVKPQIAPEVLPALAPFVGAG
                     TVVVSIMAGRTLGFLADSLPRAGLVRAMPNTPAAIGRGITVAVANSLVAPEQRALVDV
                     LLSAVGAVEWITDEALMDAVTALSGSGPAYVFLLAESMMRGGTAAGLPPAL"
BASE COUNT          532 a         1056 c         1000 g          564 t
ORIGIN      
        1 catcggcgca gcccacgccg gctggcgcgg tgccgcgagc ggcgttctcg aagcgacgat
       61 cgccgccatg gagcgctgcg gagcggaccg ggctcgtatt tcagtcgcgg tcggtcccac
      121 gattcgccag ccgaattacg aggtcggccc cgaattcgtc tcccgtttcc tcgtcgcgga
      181 cgcggcgaac gaacgatact tccggccctc gacgacgtcg cagcacgcct tgtttgatct
      241 tcccggctat atcgtcgccc gtctcactgc tgccggcatc cgcgccatcg aggatctcgg
      301 ccactgcacc tatgcggatg cggcgcagtt cttcagttac cggcgctcga cccaccgcaa
      361 ggagcgcgac tacgggcggc acgtcaacgc catcgcgctg gccgggtagc gccaatcggg
      421 caggtcgaga ggacgatcgg ggcatcgtcc gtcaaagcca aatggcggcg aatccgcggg
      481 acaacgcctg tattcacgca tccgtcatat tgccagcctt gccgcctcct tgttatcagg
      541 acgccgcgag tgcggaaggc ttttcgccag gagacagcga tgcggcccaa caacggggcg
      601 atcaagcttg tggcgggcaa ctccaaccct gcgcttgccg acgccattgc cgcctacctc
      661 gccaccccgc tgaccagggc agtggtgcgc cgcttcgccg acatggaaat cttcgtcgag
      721 atccaggaga acgtgcgcgg cacggacgtc tacgtcatcc aatcaacgtc gtttccggcc
      781 aacgacaact tgatggaatt gctcatcatc atcgacgcgc tgcgccgcgc ctcggggcgg
      841 cgcgtcaccg ccgtcattcc ctatttcggt tacgcccggc aggatcgcaa gcctgcaccg
      901 cgcaccccga tctcggccaa gctggtgtcc aatctgatca cccgcgccgg cgccgacagg
      961 gtcatgacgc tcgaccttca cgccggccag atccaaggat tcttcgatat accgaccgac
     1021 aatctctacg ccgccccgat gatggtgcgt gacatcaagg agcgcttcga tgtcagcaag
     1081 gtgatggtgg tgtcacccga tgtcggcggc gtcgggcgcg cccgcgggct cgccaagcgc
     1141 atcaacgcgc cactcgccat cgtcgacaag cggcgcgaac gcgcaggtga atctgaagtg
     1201 atgaacgtca tcggcgaggt cgaaggctat atttgcatcc tggtcgacga cattatcgat
     1261 tcgggcggca ccgtcgtgaa tgccgccgat gcgctgttgg acaagggcgc gaccgaggtt
     1321 tgcgcctaca tcacccacgg cgtgctctcc ggcggtgcgg tcgcccgcat caccgcctcc
     1381 cggctcaagg aactggtcat caccgactcg attcaaccca cccaggcggt caaggtcgcg
     1441 cacaatatcc gcacgctctc ggttgcgagc ctgatcggcg aggcgatcgg ccgcaccgcg
     1501 gcggaagaat cggtatcgag cctattcgac tgacaagact caggaattgc gcctcgcgcg
     1561 tgcggcgcgc ggattcctgc ctcccgcaat gttgattcct cgctcccggg tgccggcaac
     1621 ggaacctgtg gagaaacgac tccgcgcggc gagatatcca ccagccagtc gccgcaacgg
     1681 agcccgattg tgctttagcc actggaatca atgaggttat attcgactcg ctaagtgatt
     1741 cgccccggag cagtcgctca gctccaccgg ggactgcgtc agcggcgtcg tggtgtgcgt
     1801 gctctcaatt tgcgcattcc acgtccaggg tggagaccaa gcatggctct catcgatttt
     1861 gcccaacagc cccatgacaa cccgctcgag gtcgtcgagc aggtggcttc cactaacggc
     1921 tggtcgttcg agcgcgcggg cgaggacgag atcacgattc tcgccgccgg aaaatggacc
     1981 gactatcagg tgtcctacac ctggatgttc gacatcgagg cattacatct cgcctgcgcc
     2041 ttcgagttga aagtgccgga gcgctgccgg ggcgaggtgc agcagctcat ctcgatgatc
     2101 aacgagcaga tgtgggtcgg acatttcgat ctctggaccc aggatgggct cgtcatgtac
     2161 cgccacgcac tggtgctcac cggcggcgtc gaagcctcag ggcgccaatg cgaggcgttg
     2221 ctcgctaccg cgctcgaggc ctgcgagcgg tattttcccg ccttccaatt cgtggtgtgg
     2281 gcgggcaagc cggcgcgcgt ggcgctggat gccaccatgt tcgacaccca ggggcaggcg
     2341 taagcgtcgt ccagtctcaa gccgggccgc cgcattccga ccgcgacgct tgccatgtcc
     2401 ggcgtgccgt gccccattca gaggccgcgg atagagattg ctgccctcgc agtgcaatga
     2461 agtctccgca gacggcgtac actcatctgc gccgctcggc cggaatgacg gagcgtggca
     2521 tgagcacacc gagcacgccg gaggtacgcc ccctcgccga cctgtcgcac acgatcctcc
     2581 tcgccggggc gggcaagatg ggcggcgcct tgttgcaggg ttggctggcg ctcggacttt
     2641 cgcccgagaa ggtcgcggtc atcgagccgc tacccagccc cgagcttgcg gcgttgagca
     2701 agcagggcct gcgcctcaat ccaccccacg atgtggtcgg tgcggtagcc gccgtggtgg
     2761 tggcggtgaa accgcaaatc gcgcccgagg tcctacctgc gctcgcgccg ttcgtgggcg
     2821 caggcacggt cgtcgtgtcg atcatggctg ggcggacgct tggttttctc gcggacagct
     2881 tgccgcgcgc cgggctcgtt cgcgcgatgc cgaacacgcc ggccgcaatc ggccgcggca
     2941 tcacggtggc ggtcgctaac tcacttgtcg cgccggagca gcgggcgctc gtcgacgtgc
     3001 tgctgtccgc tgtcggtgcc gtggaatgga tcacggacga agcgctcatg gacgccgtga
     3061 ccgcgctgtc gggctcggga cccgcctacg tgttcctgct cgccgagagc atgatgcgcg
     3121 gcggcaccgc tgccggtctg ccgccggcgc tg
//
LOCUS       DATCWM010000680         2379 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_307326, whole genome shotgun sequence.
ACCESSION   DATCWM010000680 DATCWM010000000
VERSION     DATCWM010000680.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2379
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_307326"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1157
                     /locus_tag="VIQ50_13395"
     CDS             <1..1157
                     /locus_tag="VIQ50_13395"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEY9361425.1"
                     /translation="VGGLATALALERRGLEIVVCEQSPALNEIGAGLNLSPNALMALR
                     DLGVEDAVIALGSESDFLIIRSWKSGRVISRMRRGAFRQQFGAPNLTVHRADLLDVLR
                     GALKTADFRFGARCIAVEDCDRGGVARLADGSEIEADIIVGADGIHSVVRKSLFGPDA
                     PRFTGCICWRGMAAASAVPRDIAIAEGAMWMGPHGHVVHYPVRRGELINIVAHFDSDS
                     WTEESWTRECDVSELTTTYAGWHPDLLRLYTYSARWYKWALYDRDPVERWSKGRVTLL
                     GDSAHAMLPYLGQGAAMAIEDACVLSAAIARHANDLDEALLAYERVRVPRARAAVLGS
                     RERARENHLASPWSRLKRDVKFALRERFGRDKTVFQTAWLYGYDVGRELR"
     gene            1318..2310
                     /locus_tag="VIQ50_13400"
     CDS             1318..2310
                     /locus_tag="VIQ50_13400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9361426.1"
                     /translation="MSGMRRRQFIALLGGAVVSWPLAARAQQTMPVIGYIGTGSRESD
                     AFRLPSFHQGLSEAGYVAGRNVAIEYRWAEGQNDRLPALAADLVRRQVAVIAVPASTP
                     GVLAAKGATTTIPIVFYIGLDPVELGLVASLAHPGGNITGVTGWNVMVGPKRLELLHE
                     VIPSATSIALLVNPASPDLAKADSRDQQTAARSLGLQLHVLDASNERDFDTVFATLVQ
                     LRAGGLVIGTDSLFNTQKEQLAALTVRHGVPTIHQYREFVMAGGLMAYGSPTADLSRQ
                     VGVYTARILKGEKPADLPVQQATKVELFMNLKTAKTLGLTVPLPLLARADEVIE"
BASE COUNT          417 a          733 c          787 g          442 t
ORIGIN      
        1 gcgtcggcgg gcttgcgacg gcgctagcgc tggaacgacg gggtctggag attgtcgtct
       61 gcgaacagtc gcccgcactg aacgaaatag gcgctggcct caatctcagt cccaacgcgc
      121 tgatggcgct ccgggacctc ggcgtcgagg acgcagtcat cgccctcggg tcggagtcag
      181 attttctgat catccgcagc tggaagagtg ggcgggtcat ctcgcgcatg cgccgaggcg
      241 cgttccgcca gcagttcggc gcgcccaacc tgacggtgca ccgcgctgac ttgctcgacg
      301 tgctgcgcgg cgcgctcaag acggccgatt tccgttttgg agcccgctgc atcgccgtcg
      361 aagattgtga tcgcggcggg gtggcgcgcc ttgccgacgg cagcgagatc gaggccgaca
      421 tcatcgtcgg cgctgacggc attcattctg ttgtgcggaa gagcctgttc ggccctgacg
      481 cgccgcgatt caccggctgt atctgctggc gcggcatggc ggccgctagc gcggtgccgc
      541 gcgacattgc cattgcggaa ggcgcgatgt ggatgggccc gcatggccat gtcgtgcact
      601 accccgtacg acgtggcgaa ctcatcaaca tcgtcgcgca tttcgacagc gattcgtgga
      661 ctgaggagtc gtggacgcgg gaatgcgacg tgtcggagct gacgacgact tacgccggct
      721 ggcatcccga cctactacgc ctctacacct acagcgcgcg ctggtacaaa tgggcgctct
      781 acgatcgcga tccggtcgag cgatggagca aagggcgggt aacgctgctt ggcgattccg
      841 cgcacgctat gctgccttat cttggtcagg gagcggccat ggcgatcgag gacgcctgtg
      901 tgctctcagc tgcgatcgcg cgccacgcaa acgatctcga tgaggcattg ctcgcctatg
      961 agcgggtccg ggtgccgcgt gcgcgggcag ctgtgctggg atcgcgcgag cgggcccgcg
     1021 aaaaccatct tgcctcgccg tggtcgcggc taaagcgcga cgtcaaattc gcgctccgtg
     1081 agcgcttcgg tcgtgacaag acagtgtttc agactgcttg gctctatggc tacgatgtcg
     1141 ggcgcgaact gcgataacgg caagactttt caggccaagg tagtgaatga gcattgcaca
     1201 cgatgaggag ctgcaaaagc gtcggattca gaaagattca agtctgcccg aaggaccggc
     1261 cggtcccgcc gtgctagcct gagggagccg gaaaccgact gcacggatgc gagccccatg
     1321 tcaggcatga ggcggcggca gttcatcgcg ctgcttggtg gcgctgtggt ctcgtggcca
     1381 ctcgcggcgc gcgcgcagca aacgatgccg gtgatcgggt acatcggcac cggctcgcgc
     1441 gagtccgacg ctttccgttt gccttccttt caccaaggcc tgagcgaagc cggctacgtg
     1501 gcgggccgga atgtcgcgat tgaatatcgc tgggcggagg gccaaaacga tcgacttccc
     1561 gcgctggcgg ccgatctcgt tcgccgtcaa gtggcggtga tagccgtgcc tgccagcacc
     1621 cccggtgtgc tggcggcgaa gggggcgacc accacgattc cgatcgtatt ctacataggg
     1681 ctcgacccgg tcgagcttgg gcttgtcgca agcctggcac atccgggcgg caacatcacg
     1741 ggcgtgaccg ggtggaacgt gatggtaggg ccgaagcggc tggaattgtt gcacgaagta
     1801 atcccctcgg cgaccagcat agccttgctc gtcaatccgg cgagtcccga tcttgccaag
     1861 gctgactcga gagaccagca gacggcggcg cggtccctcg gtttgcagct ccatgttctc
     1921 gatgcgagca acgaacgcga tttcgatacg gtcttcgcaa ccttggtcca actgcgagca
     1981 ggcgggctcg tgatcggcac tgattcattg ttcaataccc aaaaggaaca gctcgccgca
     2041 ctaaccgtcc gtcacggagt gcccacgatc catcagtatc gcgagttcgt catggccggc
     2101 ggtctgatgg cctacggttc tcctactgcg gacctttctc gccaggtcgg cgtctacacc
     2161 gctcggattc tcaagggcga gaaaccggcc gacctgccag tccagcaggc cacgaaggtc
     2221 gaactgttca tgaacctcaa gaccgccaaa acactgggcc tcaccgtccc gctcccgctg
     2281 ctcgcgcgtg ccgacgaggt gatcgagtga aacgccgcga gttcatcacg ctgcttggtg
     2341 gggcggcggg cggctggccg ttcgtggcac gggcgcagc
//
LOCUS       DATCWM010000681         2457 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_377637, whole genome shotgun sequence.
ACCESSION   DATCWM010000681 DATCWM010000000
VERSION     DATCWM010000681.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2457)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2457)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2457
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_377637"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..304)
                     /locus_tag="VIQ50_13405"
     CDS             complement(<1..304)
                     /locus_tag="VIQ50_13405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010975294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEY9361427.1"
                     /translation="MKLYEFAPTRSIRVRWTLQELGIDFEAIPVNLLTGEHRSPAFLK
                     INPAGKLPVLIDGEMVLTESIAIVLYLAEKYRDKALIPADPQQRAQLMRWLLFTTTE"
     gene            complement(369..1358)
                     /locus_tag="VIQ50_13410"
     CDS             complement(369..1358)
                     /locus_tag="VIQ50_13410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9361428.1"
                     /translation="MKLARRVVLRLAAGAAALPAFAPTARAQLYPSRPITIIVPVPPG
                     GVADPIARILADHLTVALGQPVVVENVTGAGGSIGVGRAARAAPDGYTISIGNWLSHV
                     GASAVYPVQYDVLKDFAAVSLLTNSPMLITARKDFPANDLKELIAWLKANPNKATAAT
                     VGVGSAAHVSGVYFQRATDTRFQFVPYRGGGPAVQDEVAGHVDLMFNEGTGALPYVLS
                     HQIKTYAVLAKTRWFAAPDVPTSDELGVPGINISFWHGLWVPTGTPQEIVNKLNAALA
                     AALADATVRKRLTDIGQEIVPRDKQTPEALHAFHKAEIEKWWPIIKGANIRAE"
     gene            complement(1366..1656)
                     /locus_tag="VIQ50_13415"
     CDS             complement(1366..1656)
                     /locus_tag="VIQ50_13415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361429.1"
                     /translation="MTKTLTALVAAATLATAIAAPTVVQERCIGCGIGGVDYPIAPAG
                     YVYYPYGEPLPGANCYWFRMPAYDARGNMVGWRGRPEAFCSWLAGYRPWPLR"
     gene            complement(1724..2005)
                     /locus_tag="VIQ50_13420"
     CDS             complement(1724..2005)
                     /locus_tag="VIQ50_13420"
                     /EC_number="4.2.1.84"
                     /inference="COORDINATES: protein motif:HMM:NF014289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018822 - nitrile hydratase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SH3-like domain-containing protein"
                     /protein_id="HEY9361430.1"
                     /translation="MGAPEATHRFHVGDRVQVKHTNPAGNPRTPAYIRGKSGIVSSLH
                     GRIDNPLDHHGVYPPLCSVLFPVGEVFGGASRDTLSVDLHEDWLAPAGP"
     gene            complement(2013..>2457)
                     /locus_tag="VIQ50_13425"
     CDS             complement(2013..>2457)
                     /locus_tag="VIQ50_13425"
                     /EC_number="4.2.1.84"
                     /inference="COORDINATES: protein motif:HMM:NF014973.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0046914 - transition metal ion binding
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="nitrile hydratase subunit alpha"
                     /protein_id="HEY9361431.1"
                     /translation="PAFKQALLARGREAVRELNIPPGRLGKLGVAENTATLHNVVVCT
                     LCSCYPHDLLGDPPWWYRDDGFKEGIVRDPRGTLAHRFDLRLPESVEVRVHDSTSDVR
                     WMVLPRRPAGTDGWSEEELARLVTIDALVGTAEALLPAALARNER"
BASE COUNT          412 a          794 c          831 g          420 t
ORIGIN      
        1 gctcggtggt ggtgaagagg agccagcgca tcagctgcgc acgttgctgc gggtccgcgg
       61 ggattagcgc cttgtcgcgg tatttctcag ccagatagag aacgatcgcg atggattcgg
      121 tgagaaccat ctccccgtcg atgagcaccg gaagcttccc ggccggatta attttgagga
      181 atgcgggact gcggtgctcg cctgtaagca ggttgacggg aatggcctcg aagtcgatcc
      241 ccaattcctg aagcgtccaa cggacccgga tcgagcgtgt tggagcaaac tcgtagagtt
      301 tcattgcatt ccccaggtga tgacgaatag gtcagcggga ttgttgttcg aggctacggc
      361 gatcagtctt attccgccct gatgttcgcc cccttgatga tgggccacca cttctcgatc
      421 tcggccttgt ggaaggcatg aagcgcttcc ggcgtctgct tgtcgcgcgg gactatctcc
      481 tgaccgatat cggtgagccg cttgcgcacc gtcgcatcgg cgagcgcggc ggccagcgcg
      541 gcgttgagct tgttcacgat ctcctgcggc gtgcccgtgg gcacccacaa gccgtgccag
      601 aacgaaatgt tgatgcccgg cacgccgagc tcatcgctgg tcggaacgtc gggtgccgcg
      661 aaccagcggg ttttggccaa caccgcgtag gtcttgatct gatggctgag cacatagggg
      721 agcgcgccgg ttccctcgtt gaacatcagg tcgacatggc cggcgacctc gtcctggacc
      781 gcggggccgc cgccgcgata cggcacgaac tggaagcggg tgtcggtcgc gcgctggaaa
      841 tagacgccgc tcacatgcgc cgcactgccg actccgacgg ttgcggccgt cgccttgttg
      901 gggttcgcct tgagccaggc gatcagctcc ttgaggtcgt tggcgggaaa gtctttgcgg
      961 gcggtgatga gcatcgggct gttggtcaac aacgataccg cggcaaaatc cttgagcacg
     1021 tcgtattgca ccgggtagac cgcgctcgcg cccacgtggc tcagccaatt accgatgctg
     1081 atggtgtagc catccggcgc cgcgcgtgcg gcgcgcccga cgccgatgct gccaccggcg
     1141 ccggtgacgt tctcgaccac tacgggctgg cccagcgcaa cagtgagatg atcggcaagg
     1201 atccgggcga tggggtcggc gaccccgccg ggcggcaccg gcacgatgat ggtgatgggg
     1261 cgcgacggat agagctgcgc tcgcgcggtg ggcgcgaagg ccggcagcgc ggcagcgccc
     1321 gcagccagac gcaagacgac gcggcgagcg agtttcatcg tggtctcaac gcaatggcca
     1381 cggacggtac ccggccaacc aggagcagaa cgcctccgga cgcccgcgcc agccgaccat
     1441 gttgccgcga gcgtcgtagg ccggcatgcg gaaccaatag caattggccc ctggcagggg
     1501 ttccccatag gggtaataca catacccggc gggcgcgatg gggtaatcga cgccgccgat
     1561 cccgcagccg atacagcgct cctgcacaac ggtcggcgcg gcgatcgcag tcgccaaggt
     1621 cgcggccgca accagagcag tcagtgtttt cgtcatcggc atctcctcga gcgccgactc
     1681 gattttccta tcgtccgaaa cagccgcgag ctttgcatga tcatcacgga ccggccggcg
     1741 ccagccaatc ctcgtgcagg tccaccgaga gggtatcccg gctggcgccg ccaaacactt
     1801 cgccaaccgg aaacagcacg ctgcacagcg gcgggtagac gccgtggtgg tcaagcggat
     1861 tgtcgatgcg gccatgcagg ctactgacga taccgctctt gccccgtatg taggcgggcg
     1921 tgcggggatt gccggccggg ttcgtgtgtt tcacctgcac gcggtcgccg acgtgaaagc
     1981 ggtgcgtggc ctcgggcgcg cccatgctcg cctcagcgct cgttgcgagc gagtgccgct
     2041 gggagcagcg cctccgcggt ccccaccagc gcgtcgatgg tcaccagccg cgccaactct
     2101 tcctcgctcc agccgtcggt gcccgcgggg cggcgcggca gtaccatcca gcgcacgtcg
     2161 ctggtgctgt catgcacgcg cacctcgaca ctctcgggca gccgcaggtc gaagcgatgc
     2221 gccagcgtcc cgcgcgggtc gcgcacgatg ccctccttga agccgtcgtc gcgataccac
     2281 cacggcgggt cgcccagcag gtcgtgcggg tagcatgagc agagcgtgca caccacgacg
     2341 ttgtgcagcg tcgccgtgtt ctcggcgacg ccgagcttgc cgagccggcc gggcggaatg
     2401 ttcagctcgc gcaccgcctc acggccgcgc gccaggagcg cctgcttgaa ggcgggg
//
LOCUS       DATCWM010000682         7469 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_431798, whole genome shotgun sequence.
ACCESSION   DATCWM010000682 DATCWM010000000
VERSION     DATCWM010000682.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7469)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7469)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7469
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_431798"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..351)
                     /locus_tag="VIQ50_13430"
     CDS             complement(<1..351)
                     /locus_tag="VIQ50_13430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013214101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9361432.1"
                     /translation="MTSNQNQTSIRTVFGALFLALWLAALDQTVVSTALPTMVGDLGG
                     LSYLSWVVTAYLLTSTVAGPLYGKFGDLYGRKIVLQVAIAVFLVGSALCGIAQNMVEL
                     IAFRALEGVGSGGLM"
     gene            398..532
                     /locus_tag="VIQ50_13435"
     CDS             398..532
                     /locus_tag="VIQ50_13435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361433.1"
                     /translation="MSCRFDRFYGSEREALRLQPPRRHVIRNGVEIARTTATQELRGL
                     "
     gene            730..1383
                     /locus_tag="VIQ50_13440"
     CDS             730..1383
                     /locus_tag="VIQ50_13440"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEY9361434.1"
                     /translation="MDFEFSLFLKSLPALARGALLTAELTLVSILIGTAIGTMAGVGR
                     LSSHRLLSWSVAAYVTLMRGVPLLVTLLFLYYGLPSAGIKLDAFTVGVIALSITSGAY
                     IAEIVRAGIQSIDPGQMRAARSLGMSYAKAMRRIILPQALRRVLPPMTNEALTLLKNT
                     ALVSTIALADLLRSGLEVMTWQANTFSPFAGVALFYLALTLPLIWLNARLEQRYRIH"
     gene            1389..1520
                     /locus_tag="VIQ50_13445"
     CDS             1389..1520
                     /locus_tag="VIQ50_13445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361435.1"
                     /translation="MQPEFDLLVADARVLNPDRAGEGLQRSDIMIDGGRVVRLAPAA"
     gene            1595..2401
                     /locus_tag="VIQ50_13450"
     CDS             1595..2401
                     /locus_tag="VIQ50_13450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEY9361436.1"
                     /translation="MAPVMVRIWNLHKSYGRTEVLKGIDLTVHRGEVVTVIGPSGSGK
                     STLLSCINFLEPFDRGEITIDGQPIGWVTGAGGRTRMGEQELNLMRQRIGIVFQQFNL
                     FPHLTVLQNVIEAPIQVKGLAREQAVAIAHEQLARVGLRAKENAYPSELSGGQQQRAA
                     IARSLAMDPKVMLLDEITSALDPELIGEVLSAMRTLADAGMTMIVVTHEMAFARDVSD
                     RVVFMDEGTIVEQGAPDVLLAHPAHERTRSFLRRIIERTEPQSDLANRQE"
     gene            2405..3178
                     /locus_tag="VIQ50_13455"
     CDS             2405..3178
                     /locus_tag="VIQ50_13455"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEY9361437.1"
                     /translation="MPMLCRSTLLLVAAAAILAGASPAHAQNTLEAVRQKGVLVAGSS
                     AEYPPFEYVADGKLVGYDVDMADEITRRMGAKVAWEKIDFKGIVAALTAKRVDVLITA
                     LTWTPERAERIAFSDPYFDAGIGAITPQSSTIAKVEDLTGRRVGVQLGSSGERYVRET
                     VGSKVGQLLTYDSITLAINDLKNGRVDAVVNPLPVLRYAVRNDAGFRYTAVWDTRVVG
                     INTRLDDKELLAEINRHLRDLKSEGFLAKLETKWFGPGQ"
     gene            complement(3265..3816)
                     /locus_tag="VIQ50_13460"
     CDS             complement(3265..3816)
                     /locus_tag="VIQ50_13460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEY9361438.1"
                     /translation="MNLSPAGFPALVLNADFRPLSYYPLSLWSWQDAIKAVFLERVNI
                     VAEYDRAVRSPSLEMKLPSIVSLKTFVKPTTQPAFTRFNVFLRDKFSCQYCSSREDLT
                     FDHLLPRSRGGHTTWINVVAACSPCNLKKGNMTMDEAKMWPSQMPFQPTVNHLHRNGR
                     RFPPNYLHESWLDYLYWDTELQP"
     gene            complement(4016..4693)
                     /locus_tag="VIQ50_13465"
     CDS             complement(4016..4693)
                     /locus_tag="VIQ50_13465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020181026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEY9361439.1"
                     /translation="MAELDGPRLEPRAAPARQLIVFLHGYGADGNDLIDIGRAWQGLL
                     PQAAFVSPHAPEPCAQAPVGRQWFPLTFRDPNERWTGVNRAAPVLSAFLDAELKRRNL
                     PPSALALVGFSQGTMLALHVGLRRAVAPAAIVGYSGLLAVPPDVNPETFAAEITSRPP
                     VLLIHGDRDELIPPQALFHASSGLAALGVPVEWHMSYGIGHGIDQDGLRHGGEFLARR
                     LSPHRAP"
     gene            complement(4686..5351)
                     /locus_tag="VIQ50_13470"
     CDS             complement(4686..5351)
                     /locus_tag="VIQ50_13470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015596750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase 2 family
                     protein"
                     /protein_id="HEY9361440.1"
                     /translation="MSFFIHTEADLDHAIARLVDADPRFGIALSRAGRPPLRRRADGF
                     PGLASIVVSQQLSTASARAIWTRLNEALDPFDHTALLRARSAKLARAGLSAPKIRTLK
                     AIAKAINRGELNLRALVDKPADEAHAALTAVHGIGPWTADIYLLFCLGHADVWPAGDL
                     ALQEGARLLLALKTRPSAKEMGPLAESWRPWRGAAACMLWAYYRASKQRDGAPIAAVV
                     RNG"
     gene            complement(5412..7073)
                     /locus_tag="VIQ50_13475"
     CDS             complement(5412..7073)
                     /locus_tag="VIQ50_13475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013529857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEY9361441.1"
                     /translation="MRRSEYDYIIVGAGSAGCTLANRITEDGDSRVLLLEAGGWDRDP
                     LIHMPLAWGKILLDRRHDWGYDIEPDPSTGNRRLECMRGKIVGGSSSVNAMAYVRGHR
                     SDYDRWAANGASGWSYSDVLPYFRRQESWEGGESFYRGGHGPLATRNSRYEDPLVDAY
                     IEAAAQAGHPYNEDYNAAQQDGISRMQMTIRKGRRESAATAYLYPALSRDQLTLEVNA
                     QVTRVVMEGRRAVGVEYIRNGARLTARARREVILATGAINSPQLLMLSGIGPADELAR
                     HDIGVHVALAGVGQNLQDHAAALLLYARSSPGPVHRNMRLDRLALELARGYLFGTGFT
                     ADLPGGITAFLKTDSGEPAPDTQLLFIAGPLGAAPYLPLQKGFADSFACRIVLVRPES
                     RGSISLASSAPLAHPHIRQKLLATDRDWSTMRRAVALFRDIARQRAVASFIAGELGPL
                     ATVRNDEQLEHVIRTTAVTAHHPAGTCRMGAASDPMAVVDAELRVYGTEGLRVVDASV
                     FPDLVGGNINAAVVMIAERASDLIRGRERLGVGVREIGSVEMRPD"
     gene            7168..>7469
                     /locus_tag="VIQ50_13480"
     CDS             7168..>7469
                     /locus_tag="VIQ50_13480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase family protein"
                     /protein_id="HEY9361442.1"
                     /translation="MTTPVFRFAPSPNGYLHLGHALSALVNFDMARAAGGRFLLRIED
                     IDAARCRPHYEQAIYEDLAWLGITWEKPVRRQSAHLDDYRAALGRLDGLLYPSFETR"
BASE COUNT         1331 a         2380 c         2459 g         1299 t
ORIGIN      
        1 catcagtccc ccgctgccca ctccctcgag cgcgcgaaag gcgatcagct caaccatgtt
       61 ctgcgcgatg ccgcagagcg cggagccgac cagaaacacg gcgatcgcta cttgcagcac
      121 gatcttgcgg ccgtagagat cgccgaactt tccgtagaga gggccggcga ccgtgctggt
      181 caggagatac gcggtcacca cccaggagag atagctcaag ccgccgaggt cgccgaccat
      241 ggtcggcagc gccgtcgaga cgacggtctg gtcgagcgcg gcgagccaca gcgccagaaa
      301 cagcgcgccg aacaccgtcc gaatcgatgt ctggttctgg ttcgaggtca tccgatccta
      361 gggggttgcg tgcggcgacg tcagagggac ttgaaccatg tcgtgccgtt tcgatcgatt
      421 ctatggcagc gaacgcgaag cattgcgcct gcagccgccg cgccggcacg tcatcaggaa
      481 cggggtcgaa atcgcgcgaa cgactgcgac gcaggagctt cgcgggcttt gatcacggct
      541 taggcggatt gcggcgcggg cgccggcagc ccattgcgtc ccacattgcc ggccgctgta
      601 cgctgccggc gccggcgcga tcagctctgg cggccggccg gggaagaggg cgcaagactt
      661 ccgccgatgg ctgtggcatc gtctttgcct ctccaccgcc atatccgtcc agcatcgcag
      721 cggcggccaa tggactttga gttctcgctg ttcctgaagt ccctccctgc gctcgcgcgg
      781 ggcgcgctgc tcactgccga actcacgctc gtttcgatcc tgatcggcac ggcgatcggg
      841 accatggcgg gcgtgggacg cctctccagc catcgcttgc tctcctggtc ggtcgccgcc
      901 tacgtgacgc tgatgcgagg cgtgccgctc ctggtcacgt tgctgttcct ttactacggg
      961 ctgccttcgg cgggcatcaa gctcgacgcg ttcacggtcg gagtcattgc gctctcgatc
     1021 acatccgggg cctacatcgc cgagatcgtt cgcgccggga tccagtcgat cgatcccggg
     1081 cagatgcgtg ccgcccgctc gctgggcatg tcttatgcca aggcgatgcg gcgcattatc
     1141 cttccgcaag cgttgcgccg cgttttgccg ccaatgacca acgaggcgct gacgctattg
     1201 aagaataccg cactggtttc caccatcgcg ctggccgatc tgctgcgttc gggacttgag
     1261 gtcatgacgt ggcaagccaa cacctttagc ccgttcgccg gcgtcgcttt gttctatctt
     1321 gcgttgaccc tgccgctcat ttggctcaat gcccggctcg agcagcgcta tcgaattcac
     1381 tgacccccgt gcagccggaa ttcgacctcc tcgtcgcaga cgcccgcgtg ctcaacccgg
     1441 atcgcgcggg cgaaggtttg caacgatccg acatcatgat cgacggcggc cgcgtcgttc
     1501 ggctggcgcc ggcggcatag gagctggcgg catgagccga tcgagcctgt tggattgcgc
     1561 cggtgcgagc cgggcgggca tcgaaagcag ccccatggcg ccggtcatgg ttcgcatctg
     1621 gaatttgcac aagagctacg gccgcaccga agttttaaag ggcatcgatc tgacagttca
     1681 ccgcggcgag gtcgtcaccg tcatcgggcc gagcggatcg ggaaagagca cgttgctgtc
     1741 gtgcatcaac tttttggagc cgttcgatcg gggcgagatc accatcgacg gccaaccaat
     1801 cggatgggtg actggcgccg gcggccggac gcgaatgggc gagcaagagc tcaatctgat
     1861 gcggcagcga atcggcatcg tgtttcagca attcaacctg tttccgcatt tgaccgtgct
     1921 gcagaacgtg atcgaggcgc cgatccaggt gaagggtctt gcccgcgaac aggccgtcgc
     1981 aatcgcgcac gagcagcttg cgcgcgtcgg tttgcgcgcc aaggagaacg cctatccgag
     2041 cgagctttcg ggcgggcagc agcagcgcgc cgccatcgca cgcagccttg cgatggatcc
     2101 gaaggtgatg ttgctcgacg agatcacctc ggcgctcgat cccgaactca tcggcgaggt
     2161 tctttccgcc atgcgcacgc tggcggacgc gggaatgacg atgatcgttg tgacacacga
     2221 aatggcgttt gcgcgcgatg tctcagatcg cgtcgtcttt atggatgaag gcacgatcgt
     2281 cgaacaaggc gcgccggacg ttctgctcgc ccatccggcc cacgagcgca cccgatcgtt
     2341 tctgcggcga attatcgaac gcaccgaacc tcaatccgac ctcgccaacc gtcaggagtg
     2401 acagatgccc atgctttgcc gttcaaccct ccttctcgtg gcagccgctg cgattctggc
     2461 aggggcctcc ccagcgcacg cgcagaacac attggaggcg gtcaggcaga agggcgtgct
     2521 ggtcgcgggc agcagcgccg aatacccgcc gttcgagtac gtcgccgatg gcaaactcgt
     2581 cggctatgac gtcgacatgg cggatgaaat cacgcgccgc atgggcgcga aggtggcctg
     2641 ggaaaagatc gatttcaaag gcatcgtggc ggcgctcacg gccaagcgtg tcgatgtgct
     2701 gatcaccgca ttgacgtgga cgccggagcg cgccgagcgg attgccttct ccgaccccta
     2761 tttcgatgcc ggcattggtg cgatcacgcc gcaatcgagc acgattgcga aggtggaaga
     2821 cctgacgggc cgcagagtcg gcgtacagct cggcagctcc ggggagcgct acgtgcgcga
     2881 aaccgtcggt tcgaaagtcg gtcagctcct gacctatgat tcgatcacgc tcgccatcaa
     2941 cgatctcaag aacggccgcg tcgacgcggt cgtcaatccc ctgccggtcc tgcgctatgc
     3001 cgttcgcaac gacgcaggat tccgctacac cgcggtgtgg gacacccgcg tcgttggcat
     3061 caacacccgg ctcgacgaca aggaactgct cgccgaaatc aatcggcacc tgcgcgacct
     3121 caagagcgaa ggcttcctcg ccaaactgga aacgaagtgg ttcgggcccg gccagtgaca
     3181 gccggtggag gcgcgatgcc gcggtcttcg acgcatcgtt tctgccgccg gcggcagaac
     3241 gcaacgtgga ctgaaccact cgctttacgg ctgcagctcg gtgtcccagt agaggtagtc
     3301 gagccagctc tcgtgcagat agttgggcgg aaagcgccgg ccgttgcgat gcaaatggtt
     3361 gacggtcggc tggaacggca tctgcgacgg ccacatcttg gcctcgtcca tagtcatgtt
     3421 gcctttcttg agattgcagg gcgagcaggc ggcgaccacg ttgatccagg tcgtgtgccc
     3481 gccgcgcgag cgcggcaaca gatgatcgaa cgtgaggtct tcgcgcgagc tgcaatattg
     3541 gcagctgaac ttgtcgcgca ggaagacgtt gaagcgggtg aatgccggct gggtcgttgg
     3601 cttcacgaag gtcttgagcg acacgatgct ggggagcttc atctccaggc tcgggctgcg
     3661 caccgcccgg tcgtattcgg cgacgatgtt cacccgctcg agaaacacgg ccttgatggc
     3721 gtcctgccac gaccacagcg acagcgggta gtagctaagc ggacgaaagt ccgcgttgag
     3781 cacgagagcg ggaaaacctg cgggcgacaa attcagggcg ctccttgtct cttcccctgc
     3841 gaaccgcggt gcgcccccag tctatagggt agcgtgacag gattgtgaag gctgctccag
     3901 gggttaccga gcctcggcga aatcgcatga ctgccgctca tggctctctc cgttcgtccg
     3961 aaagagggcc cgcactccga atcaccggcc ctggtgtcgg cgcccgattc ggcggctacg
     4021 gagcgcgatg aggcgacagc cgccgtgcga gaaactcgcc gccgtggcgc aggccgtcct
     4081 ggtcgatacc gtggccgatg ccgtaagaca tgtgccattc gacgggcacg ccgagcgcgg
     4141 cgagcccgct cgacgcatgg aacagcgctt gcggaggaat caactcgtcg cgatcgccgt
     4201 gaatgagcag gaccggcggc cgcgatgtga tctccgccgc gaatgtttcc ggattgacat
     4261 cgggcggcac cgccaacaat ccggaatagc cgacgatggc ggcgggcgcc accgcccggc
     4321 gaagtcccac gtgcagcgcc agcatcgttc cttggctgaa gccgacgagc gcgagcgccg
     4381 aaggcggcag gttgcgccgc ttgagttcgg cgtcgagaaa ggccgagagg acgggcgccg
     4441 cccggttgac gccggtccag cgttcattgg ggtcgcggaa ggtcagtggg aaccattgcc
     4501 ggccgaccgg cgcttgggcg caaggctccg gggcgtgcgg cgagacgaac gcggcctgcg
     4561 gcaacagccc ctgccaggcg cggccgatat cgatgagatc gttgccgtcg gcgccgtagc
     4621 cgtgcagaaa cacgatgagc tgccgcgccg gagcggcgcg cggctcgagc cgcggaccgt
     4681 cgagctcagc cattgcgcac caccgccgca atcggcgcgc cgtcgcgctg cttgctcgcg
     4741 cggtaatacg cccagagcat gcaggctgcc gcgccgcgcc acggacgcca ggattcggcg
     4801 agcgggccca tctcttttgc cgacggccgg gttttgagcg cgagcaagag ccgcgcgccc
     4861 tcctgcaagg cgaggtcgcc cgcgggccaa acatcggcat ggccgaggca gaacagaaga
     4921 tagatgtccg cggtccaggg gccgatgccg tgcaccgccg tcaacgcggc gtgagcctcg
     4981 tccgccggtt tatcgacaag ggctcgaagg ttgagctcgc cgcgattgat cgccttggcg
     5041 atggccttga gcgtgcgaat cttcggcgcc gaaaggccgg cgcgggcgag cttggccgag
     5101 cgcgcgcgca acagcgccgt gtgatcgaat ggatcgagag cttcgttgag ccgcgtccag
     5161 atcgctctcg cgctggcggt cgagagctgt tgcgagacga cgatcgatgc gagccctgga
     5221 aatccgtccg cccgtcgccg cagcggcggc cggcccgccc gcgagagcgc gatgccgaag
     5281 cgcgggtcag cgtcgacaag acgggcgatg gcgtgatcga gatccgcttc ggtgtgaatg
     5341 aagaacgaca tggcggcggc gaagcatgta caaataccat cgcaacgcaa ccccttttgt
     5401 ggcttcaggc gctaatcggg tcgcatttcg accgacccaa tttcccgcac gccgacgcca
     5461 agcctttcgc ggccacgaat cagatcgctc gcgcgctctg cgatcatcac cacggccgcg
     5521 ttgatgttgc cgccgacgag gtcgggaaag accgaggcgt cgacgacacg caagccttca
     5581 gtgccgtata cgcgaagctc tgcgtccacc accgccatgg gatccgacgc tgctcccatg
     5641 cgacaggttc ctgcgggatg atgtgcggtc accgcggttg tgcgaatgac atgctccaac
     5701 tgctcgtcgt tgcgcaccgt cgcgagtggt cccagttctc cggcgatgaa tgatgcgacg
     5761 gctcgttgcc gcgcgatgtc acgaaagagc gcgaccgctc ggcgcatcgt cgaccagtcg
     5821 cgatccgtcg ccaagagctt ttgccggatg tggggatgag ccaatggggc ggacgaagcc
     5881 aagctgatgc tgccgcggct ttctggccgc acgagtacga tgcggcaggc aaagctgtcg
     5941 gcgaagccct tctgcagcgg aagataaggc gctgcgccga gcggccccgc gatgaagagg
     6001 agttgcgtat cgggcgccgg ctcgccgctg tccgttttca ggaaggcggt aattccgccg
     6061 ggaagatcgg cggtgaagcc ggtcccgaac agatagcctc gtgccaattc cagggcaaga
     6121 cgatccaagc gcatgttgcg gtgaacggga ccgggcgagc tccgggcata tagaaggagc
     6181 gcggcggcat gatcctgaag gttttgtccc acgccggcga gcgcgacgtg gacgccaatg
     6241 tcatgccgag ccagttcgtc cgccggcccg atgccggaca acatcagcaa ttgaggcgag
     6301 ttgatcgcgc ccgtggcaag aatgacttcg cggcgcgctc gcgccgtgag gcgcgcgccg
     6361 ttgcggatat actccacgcc gacggcgcgg cggccttcca tgacaacgcg cgtgacctgc
     6421 gcgttcacct ctagcgtcag ctgatcgcgt gacaatgccg gatagaggta ggcggttgct
     6481 gcgctctcgc gccgcccctt gcggatcgtc atctgcatgc ggctgatgcc gtcctgctgc
     6541 gccgcgttgt agtcctcatt gtagggatgg cccgcctggg cggccgcttc gatataggca
     6601 tcgacgagcg ggtcttcgta tctcgagttg cgcgtggcca gcggaccgtg tccgccccga
     6661 tagaagcttt cgcccccctc ccaggactcc tgccgtcgga aatagggcaa cacatcggaa
     6721 tacgaccacc cggatgcgcc attggcagcc cagcgatcgt agtcgctccg gtgcccgcgg
     6781 acatacgcca tggcattgac cgaggacgag ccgcccacga tcttgccgcg catgcattca
     6841 aggcgccggt tgccggtact gggatcgggc tcgatgtcgt aaccccagtc gtggcgccga
     6901 tccaaaagga tcttgcccca ggcaagcggc atgtgaatga gcggatcgcg atcccagccg
     6961 ccggcctcca gcaggagaac gcggctgtca ccgtcctcgg tgatccgatt agccagcgtg
     7021 cagccggcgg acccggcccc gacaatgatg taatcgtact cagatcgtct catgatcggg
     7081 gcgctgtgga ctgctgtcga gaggacgagc agggaagact atcacaggtc cgcagcaagc
     7141 tgaggcgtgt gagccgctgg ggcgcgcatg actactcccg tcttccgttt tgcgccgagc
     7201 ccgaacggct atttgcatct tggccatgcg ctctccgcgc tcgtcaattt cgacatggcg
     7261 cgcgcggccg gtggccgctt cctgctgcgc atcgaggaca tcgacgcggc gcgttgccgg
     7321 ccacactacg agcaggcgat ctacgaggac ttggcatggc tcggcatcac ctgggaaaag
     7381 ccggtgcggc gccagagcgc gcacctcgac gactatcgcg ccgcgctggg gcggctcgac
     7441 ggcctcctct atccgagctt cgagacgcg
//
LOCUS       DATCWM010000683         2061 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_280603, whole genome shotgun sequence.
ACCESSION   DATCWM010000683 DATCWM010000000
VERSION     DATCWM010000683.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2061
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_280603"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            422..1120
                     /locus_tag="VIQ50_13485"
     CDS             422..1120
                     /locus_tag="VIQ50_13485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019963583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RibD family protein"
                     /protein_id="HEY9361443.1"
                     /translation="MFGPLRRGQVDDLVVVGQCGQSIDARIATASGHSHYINGESGLI
                     HLHRLRALVDAVVIGVGTAIADDPQLTVRRVEGPNPARVVIDPNGRLPSTARLLAADG
                     SCRLVVSAIEAPPALPAGVEVVRLPAPDGQLAPDGIVAALAARGFRRILIEGGADTVS
                     RFLAARCLDRLHVLVAPIILGGGRSSLTLPPIERLDEAMRAPMRAHSLGGDVLLDCDL
                     SAQRLPIGRAKISM"
     gene            complement(1081..1890)
                     /locus_tag="VIQ50_13490"
     CDS             complement(1081..1890)
                     /locus_tag="VIQ50_13490"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025033.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY9361444.1"
                     /translation="MSEYSADWLALREPYDRAARNAAVLDAVACTFAGQGAISVVDLA
                     CGTGSTMRAIRRHLPARQSWRLVDNSLSLLARVASYRSPSHLTVATAAVDLARDLELA
                     LDGPLDLVTTSALLDLVSPAWLDRLIVEVAARRLPFYGALTYDGRAVTQPLARCDLEL
                     LAGFNLHQRTNKGFGPALGPAAAARAAQRFEEFGYTVELGQSDWVFGPDDRAIQEAVF
                     VSWAEIGPLTTTLSSHEISGWLAWRRAHLAEGRSRLRIGHIDIFARPIGRR"
BASE COUNT          355 a          710 c          666 g          330 t
ORIGIN      
        1 cggccgaggt caggatgacc ggccggctac agcgaaactc ggcgagaccg cgctcgactg
       61 cgatttgctc ggcggcgcca aacgttcccg acgtaccact cccagccatg tcacacacgc
      121 gcgacttgcg attcgcgccc agcccaaacg tcgaccaaat aagaactcgc cctggtggag
      181 tttattccgt taaaatcttt ttgattgcgc gtgtttgcag tcattttctt gcgaaatatc
      241 atggcacgcg gcagcacgct gcgaaagtag gtaattgacg atggcggttc gacgccccgc
      301 cgagccggat cggaatgtgc ctggtccctc acaaaacggc tccggctccg cctcttcatg
      361 ggcgccggta ccaacaacgt ttcgcagcgc caaccgttcc ctgccgcgcc cgtgggagca
      421 catgttcggc ccactgcgtc ggggccaggt cgatgacctc gtcgtggtcg ggcaatgtgg
      481 ccagtccatc gatgcccgca tcgccaccgc gagcggacac tcccactata tcaatggcga
      541 gagcggtctc atccatttgc atcggctgcg ggcgctggtt gacgcggtcg ttatcggcgt
      601 aggcacggcg atcgccgacg atccgcagtt gaccgtccgg cgcgtcgagg gcccaaaccc
      661 agcgcgggtc gtcatcgatc ctaacggccg attgccgtcg accgcgcggc ttctggcggc
      721 cgacgggagc tgccggctcg tggtcagcgc catcgaggcg cccccggccc tccctgccgg
      781 tgtcgaagtc gtccggcttc ccgcccccga cggtcagctc gcccccgacg gcatcgttgc
      841 cgcgctggct gcgcgcggtt tccgccggat cctgatcgaa ggcggcgccg acaccgtctc
      901 ccgcttcctc gcggcacgct gtctcgaccg gctgcacgtt ctggtcgctc ccattatcct
      961 gggcggggga cgatcaagcc tcacattacc gccgatcgag cggctcgatg aggcgatgcg
     1021 cgcgcccatg cgcgcccaca gtctcggtgg cgacgtgctg ctcgactgcg acctcagtgc
     1081 tcagcgcctg ccgatcggcc gggcgaaaat atcgatgtga ccgatccgca gccgcgaccg
     1141 gccttcggcc agatgcgcgc gccgccacgc cagccagccc gagatttcat gcgacgagag
     1201 cgtcgtggtc agcggtccga tctccgccca gctgacaaaa accgcctcct gaatcgcccg
     1261 atcgtcgggc ccgaacaccc agtcggactg gcccaactcc acggtgtagc cgaactcttc
     1321 gaaccgctgc gcggcgcgcg ccgctgccgc cgggccgagc gcgggaccaa agcccttgtt
     1381 ggtgcgctgg tggaggttga agccggccag cagctcgaga tcgcagcgcg ccagcggttg
     1441 ggtgacagcg cggccgtcat aggtcagcgc accgtaaaac ggcagccgcc gcgccgccac
     1501 ctcgacgatg agacgatcga gccatgcagg ggagacaagg tcgagcagcg ccgatgtggt
     1561 gacgagatcg agcggcccat ccagcgcgag ctcgagatcg cgcgcgagat cgaccgccgc
     1621 ggtggcgacc gtcagatgcg acggactccg gtaggaagcc acccgcgcga gcagagagag
     1681 actgttgtcg accagcctcc aactctggcg cgccgggaga tggcgccgta ttgctcgcat
     1741 tgtcgagccg gtgccgcagg cgagatcgac aaccgaaatg gctccctgcc cagcgaaggt
     1801 gcaggccacc gcatcgagca ccgcggcatt gcgcgcagcg cgatcgtaag gttcgcgtaa
     1861 cgcgagccag tcggcggagt attcgctcat ctcagccggt ccaagacatg ggcaaataac
     1921 atggcctgtt cccgccagga tggaaaggtg gcggcacggg cgccggcggc gaggcgcttg
     1981 cgctcgccgg cattggcaat gagccgttgc aatgcccccg cgagcgcctc gacgttgtcg
     2041 ggggcaacga gcacgccggc a
//
LOCUS       DATCWM010000684         2244 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_242552, whole genome shotgun sequence.
ACCESSION   DATCWM010000684 DATCWM010000000
VERSION     DATCWM010000684.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2244)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2244)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2244
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_242552"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..216)
                     /locus_tag="VIQ50_13495"
     CDS             complement(<1..216)
                     /locus_tag="VIQ50_13495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEY9361445.1"
                     /translation="MHLDLKSSLMLRLVAGALACFFIAAGLALFGTYREVRQVNARVA
                     DLLVKRLQIQLSHIESGRDATTRFPDFD"
     gene            529..1435
                     /gene="pqqB"
                     /locus_tag="VIQ50_13500"
                     /pseudo
     CDS             529..1435
                     /gene="pqqB"
                     /locus_tag="VIQ50_13500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012453680.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein
                     PqqB"
     gene            1441..2244
                     /gene="pqqC"
                     /locus_tag="VIQ50_13505"
                     /pseudo
     CDS             1441..2244
                     /gene="pqqC"
                     /locus_tag="VIQ50_13505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012253378.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline-quinone synthase PqqC"
BASE COUNT          415 a          712 c          705 g          412 t
ORIGIN      
        1 atcgaagtct ggaaagcgcg ttgtcgcatc acggcctgac tcgatgtgag acaattgaat
       61 ctgcaaccgc ttaaccagca ggtcggcgac acgcgcgttg acttgacgaa cctcgcgata
      121 agtcccgaac aacgcaagtc cggcggcgat gaagaagcaa gcgagcgcgc cggcgacaag
      181 tcgcagcatc agtgatgatt tgagatcgag atgcataccg ctcttctggt cagcgggttt
      241 ttgcgacaac cctcgattgc agaacgctgt tatcttacgc cacgcctgcc gttggtctag
      301 ggagacacgc tcaactgccg ccgggcaatt ttcccaaacc ttctcaggca aagtgccgtt
      361 ttacggctga cggcggtggg gcattaaagg ggtattgtct gtccccacaa ccaaggagaa
      421 agagcgccat gtcatggaca actccgagac tcatcgaagt gtgcgtcggc ctggagatca
      481 acggatattt gccggccgag ttctgatctc cacctgcgtc gatcctgaat ggggcgatta
      541 accgccctgg tcctaggttc ggcggcgggg ggaggttttc cgcaatggaa ttgtcgctgc
      601 ccgacatgcc ggttggcgtg ggcgggtgat gcgcgcgtgc agccacgcac gcaggcaagc
      661 cttgctgtca ccgccgacgg cgaaaactgg ctgttgatca atgcctcccc ccgatcttcc
      721 ccagcagatt cggcagtcgc aggcgctgcg tccgcgcgat ggcacgcgcg gaagcccgat
      781 caaagctgtg ttgctcaccg gcgcggagat cgatcaaatc gcgggtttgc tgagcttgcg
      841 agaacgcgag cccttcctgc tgtgcgccac ggccgtcacg cttgccgtgc tcgcggagaa
      901 cgccgtgttc ggcgtgctga cgcccgacgt agtgaggcgc aagacagtcg ttgccgcaac
      961 ggcgttcatg ctccccggcg gattgcaggc gcaagtgttc acggtgccgg gtaaggtgcc
     1021 gctctatctc gaaagcgaca gcccggaaac cgccgccgag acggaggcaa atgtcggcat
     1081 cgagctttgc gcaggcaacg cgcgcatcgt ctatatcccc ggcgccgccg cggtgacgcc
     1141 gacgatgctg gcacggatgg aagtcgccga tatcgtcttc ttcgacggca ccctctttcg
     1201 cgacgacgag atgatcacga ccggtactgg cgccaagacc ggccgccgca tggggcacat
     1261 gccgatcgac ggcgaggacg ggtctctggc cgccctcgag cggctctctg ctcggcgcgt
     1321 ctatgtgcac atcaacaaca ccaatccgat cctgatcgcc ggttcgcccg agcgcctgca
     1381 cgtggagggc aagggctggg aaattgcgca cgacggaatg gagatcacgt tgtgaaggcg
     1441 atgacgcctt ccgaactcga agcacaactg cgcgacatcg gcgcgcggcg ctatcatcgg
     1501 ctgcacccgt tccatgtgct gctgcacggc ggcaaatgca cgaagggcca ggtgcaagcc
     1561 tgggcgctca atcgttacta ctaccaggcg atgatcccgg tgaaagacgc gagcctgatc
     1621 gcgcgctgtg aggatccggc gctgcgccgg gagtggcggc gacgcctcgt cgaccatgac
     1681 ggcgagcgcg atggcgaggg cggcattgcc cgctggctca agctgacgga cggactgggg
     1741 ctcgaccgcg actacgtcgt ttcgctcgcc gggttgctcc cagcgacgcg ctttgccgtc
     1801 gaagcgtatg tgcacttcgt ccgcgagaag acgctgctcg aggccgtcgc ctcttcgctc
     1861 accgagctgt tttcaccgca aatcatcggc gagcggctga ccggcatgct caagggctac
     1921 gacttcgtca gcgccgacac gctcgcttat ttctccgcgc gcccgccgct tgcccagcgc
     1981 gactccgact tcgcgctcga ttacgtcaag cgccacgccg agacgccgga agcccagcag
     2041 gccgtgctca aagcactcga attcaagtgc cacgtgctat gggcgatgct ggatgcgctt
     2101 tatcatgcct atgtggcacc gaggcatgtt ccgccaggcg ccttcgtgcc gcaggactgg
     2161 agcaccgtct gagcgatccg agcacgctga tcccttccga ggcgcggcca cgactgccgc
     2221 tttgcccgct cggctgcccc tatt
//
LOCUS       DATCWM010000685         2707 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_10327, whole genome shotgun sequence.
ACCESSION   DATCWM010000685 DATCWM010000000
VERSION     DATCWM010000685.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2707
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10327"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..267)
                     /locus_tag="VIQ50_13510"
     CDS             complement(<1..267)
                     /locus_tag="VIQ50_13510"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY9361446.1"
                     /translation="MIAIPIRTAEARDLAAITRIYEHAVRHGTASFELEPPSEREMGR
                     RYEALRSGGYPYLVAQLEREIMGYAYAAPYRARPAYRGTVEDSIY"
     gene            complement(403..1167)
                     /locus_tag="VIQ50_13515"
     CDS             complement(403..1167)
                     /locus_tag="VIQ50_13515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004107926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HEY9361447.1"
                     /translation="MSDFDRNYAAARRGVGADRAVAIDQGLRAYMIRVYNYMALGVAL
                     TGIASWLTFQAAVVTNANGAIIGLTSFGQMIFSGPAVLVLFLGTLGLVFLISWRIDRL
                     EPSTAFSLFMVYAALLGVMLSSIFLTYTGASITRVFFISAAAFGALSLYGYTTQRDLS
                     PIGSFLMMGLIGLIIAMLVNLFLKSSGLDFVISAVGVLIFAGLTAWDTQRIKEMYDPM
                     EDGTVVGRKAVMGALSLYLDFINLFMFLLRFLGDRR"
     gene            complement(1497..>2707)
                     /locus_tag="VIQ50_13520"
     CDS             complement(1497..>2707)
                     /locus_tag="VIQ50_13520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEY9361448.1"
                     /translation="LVAGLIMTAARRLPRPHSPLVRLALANIHRPGALTPSVVLSVGL
                     GLAVMVAVISIEGNLRRHFLAALPDSAPSFYFVDIAASDGEAFDAFIRARAPRASLDR
                     VPMLRGRIVAANGVAAEKLQPSTDALWALRGDRGITYGDALPAGSRLVEGEWWQSSYK
                     GPPLISLETRIAEGLGLKVGDEITVNVLGRNVTATIANLRAVDWQSLGINFVMVFSSA
                     TFRGAPHTDIATLTYPGGTTREEEAAVLRAVADAFPAVVTVPVRDAIDAAGQIIANLA
                     LAIRGAGALTLVVAVLVLGGALAAGHRHRVYDAVILKTLGATRLRLLSAYALEYLALG
                     VITALFGVAAGSAAAALIIIKLMKLPFVWLPLPLLVAAVAAIAIMVALGLIGTFTALG
                     HKPARVLRNL"
BASE COUNT          544 a          873 c          883 g          407 t
ORIGIN      
        1 gtagatcgaa tcctccacag tcccgcgata agcgggacgc gcgcgatagg gcgctgcata
       61 ggcatagccc atgatctccc gctcgagctg tgccaccaga tagggatagc cgccgctgcg
      121 aagcgcctcg taccggcgcc ccatttcacg ctcgcttggc ggctccagct cgaaggatgc
      181 cgtgccgtgc cgcaccgcgt gctcgtagat acgggtgatc gctgcgaggt cgcgcgcttc
      241 ggccgtgcgg atggggatgg cgatcatgaa tcatgacggc ggcaggccga tgtgcgccac
      301 gatatccttt ccgcagcgcg ctgtccggct cgccgcgcaa acgcgacggc gccccggctc
      361 atcgccgagg cgccgcgcag acaaaatcgc tgtcgtgacc gctcagcggc ggtcgccgag
      421 gaagcgcaac aggaacatga acaggttgat gaagtccaga taaagcgaga gcgcgcccat
      481 caccgctttg cggccgacga ccgtgccgtc ctccatcggg tcgtacatct ccttgatgcg
      541 ctgcgtgtcc caggcggtga ggccggcgaa gatcagcacg ccgaccgcgg agatcacgaa
      601 gtcaagccca ctgctcttga ggaagagatt gacgagcatg gcgatgatca gcccgatcag
      661 ccccatcatc agaaacgaac cgatcggcga gagatcacgt tgcgtcgtgt aaccatacag
      721 gctcagtgca ccgaacgccg cggccgagat gaagaacact cgcgtaatcg aagcgccggt
      781 ataggtcagg aagatcgacg acaacatcac tccgagcagg gccgcataga ccatgaacag
      841 cgagaacgcg gtcgagggct ccagccggtc gatgcgccag ctgatcagaa acaccagccc
      901 cagcgtgccg agaaacagaa ccagcacggc cggtccgctg aagatcatct ggccgaacga
      961 cgtcagtccg atgatcgcgc cgttggcatt ggtaacaacc gccgcctgga acgtgagcca
     1021 ggaggcgatg ccggtgagcg cgacgcccag ggccatgtag ttatagacgc ggatcatgta
     1081 ggcccgcagg ccctgatcga tcgcaactgc ccggtccgca ccgacgccgc gtctggcagc
     1141 cgcgtagttc cggtcgaaat ccgacatgga agacacctct ctctattccg accccgaggt
     1201 cggatcatgt ggcgcctacc gggaagagcg gctggcgtcc gatgcgcgga atctagtgcg
     1261 ggaaaggttc ccgcgccaga tgccacaaag ggatttgttg acgctggctt ctccccgcgt
     1321 catcccgaca gaacttacaa tctagcaatg tgacggtgct gcgacgcgcc ggccgggcgc
     1381 ggcgtgttgt cgccgtcggc catccgtgac gcatggcttt gcgcccgaaa cgggcgcgca
     1441 gcgccggtcg gcatcggctg ccggatctct ttcacgtcca ccttgctgaa tgcgttctag
     1501 aggttacgga gtacgcgcgc cggcttatgg ccgagggccg tgaacgtgcc gatcagtcct
     1561 agcgctacca ttatggcaat ggcggcgacg gcagcaacga gcagcgggag cggaagccag
     1621 acgaatggaa gcttcatcag tttgatgatg atcaaggccg cggctgccga gccggcggcc
     1681 accccgaaca gagcggtgat cacgccgagg gcaaggtatt caagcgcata ggcggacaga
     1741 agccgaagcc gcgttgcgcc gagggtcttg aggatcacgg cgtcgtagac ccgatgccgg
     1801 tgcccggccg cgagcgctcc cccgagcacc agtacggcca cgaccagcgt gagcgccccc
     1861 gctccccgga ttgccagcgc caggttcgcg atgatctggc cggccgcgtc gatcgcatca
     1921 cgcacaggca cggtcacgac ggcgggaaag gcatcggcca ccgctctgag cacagcggct
     1981 tcctcctcgc gcgtggtccc cccgggatag gtgagagtgg cgatatcggt gtgcggcgcg
     2041 ccgcggaacg tcgcggacga gaataccatg acgaagttga tcccgaggct ctgccaatcg
     2101 accgcgcgca agttggcaat cgtcgcggtc acgttgcggc ccaaaacatt gaccgtgatc
     2161 tcgtcgccga ccttaaggcc aagcccctcg gcgatgcgag tctcgagcga gatcaatggg
     2221 ggacccttgt agctcgattg ccaccattcc ccctcgacca aacgcgagcc ggccggaagc
     2281 gcatccccat aggtgatgcc gcgatcgccg cgcagtgccc agagcgcatc agtggacggc
     2341 tggagctttt ccgcggcgac gccgttcgcc gctacgattc gaccacgcag cataggcacg
     2401 cggtcaagcg aggcgcgtgg cgcgcgcgcg cgaatgaagg cgtcgaacgc ttcgccatcg
     2461 gaggccgcga tgtcgacgaa gtagaacgac ggcgcgctgt ccggcaatgc cgccaggaag
     2521 tggcgccgca aattgccctc gatcgagatc acggcgacca taaccgcaag acccaagccg
     2581 actgatagga cgacgctcgg cgtgagcgcg cccggccggt ggatgttggc aagcgccagg
     2641 cgaacgagcg gcgagtgcgg gcgtggcagg cgacgcgcag ccgtcatgat cagccccgct
     2701 accaggc
//
LOCUS       DATCWM010000686         4550 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_512547, whole genome shotgun sequence.
ACCESSION   DATCWM010000686 DATCWM010000000
VERSION     DATCWM010000686.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4550
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_512547"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..888
                     /locus_tag="VIQ50_13525"
     CDS             <1..888
                     /locus_tag="VIQ50_13525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY9361449.1"
                     /translation="EEAAHQRTLAREREWIAASPRARQAKSKARYQRYEDLVKQAAEK
                     TAQSAQIIIPVTERLGQTVVEFEGLRKGYGDNLLIDDLTFRLPPGGIVGIIGPNGAGK
                     TTLFRMVVGQEKPDKGSIKVGETVHLGYVDQSRDTLDGKKNVWEEISGGEDIIQLGKR
                     EVNSRAYCSNFNFKGADQQKKVGSLSGGERNRVHLAKMLKSGANVLLLDEPTNDLDVD
                     TLRALEEALEDFAGCAVIISHDRWFLDRIATHILAFEGDSHVEWFEGNFQDYERDKMR
                     RLGTDSIVPHRIKYKKFSR"
     gene            888..1661
                     /gene="tam"
                     /locus_tag="VIQ50_13530"
     CDS             888..1661
                     /gene="tam"
                     /locus_tag="VIQ50_13530"
                     /EC_number="2.1.1.144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030798 - trans-aconitate
                     2-methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trans-aconitate 2-methyltransferase"
                     /protein_id="HEY9361450.1"
                     /translation="MSEDWSARQYLKFEDERTRPPRDLLAQVPLRSARRVFDLGCGPG
                     NSTELLVQRYPRAQVTGVDSSPDMLRQAHQRLPNCEFVQADLAHWSPPEHTELLFGNA
                     VFQWVPDHPAVFRRLLAALPAGGVLAVQMPDNTQEPALAIMREVAASGAWAAPLAQAA
                     AARDDLPTPADYYDLLGSLCARLDIWHTAYNHVMAGTEAVVEWFKGSALRPFLSPLDE
                     SMRRGFLAEYTTRIASAYPPRHDGRVLLRFPRLFIVAMR"
     gene            complement(1718..2311)
                     /locus_tag="VIQ50_13535"
     CDS             complement(1718..2311)
                     /locus_tag="VIQ50_13535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008835721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPF/RaiA family ribosome-associated protein"
                     /protein_id="HEY9361451.1"
                     /translation="MLQVPLEIAFHNIESSQWAEQEIRARVADLERIYGRLISCRVRI
                     DQRAKDLSGTIPPVVHIELGIPGRNDLVVSHEPEHLLRKYRHPDLHKAINEAFRIAER
                     QLLDLKEQRDGRTKASDHDTENQSLGQIAEITPEQDFGFLLTKEGGLLYFHRNALLSG
                     DFDQLERGQDVSYNEDMGDTGPIATKVRVKSKSSGTT"
     gene            2441..3688
                     /locus_tag="VIQ50_13540"
     CDS             2441..3688
                     /locus_tag="VIQ50_13540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HEY9361452.1"
                     /translation="MGRVGTYTAIVVGLWLAAAALASARAADPSFQKWLEDLWPQAQT
                     LGISRGTFDTATRGVEPDLTLPDLDLPGREGAPPRGQAEFVQTPADYIKESNISYLAA
                     QGKKLAAEHARTLAAIEQQFGVPGNILLAIWGRETAFGGYKLPKNAITVLATQGYYGR
                     RKDFFRQELLYALKMLEEGHVKLADMRSSWGGAMGLTQFLPSEFYKYAVDFDGDGKKD
                     IWKSVPDALASAAQQLVGKGWQRGTRWAYEVHAPQGVDCTIGVPEVTRPLGEWLKQGF
                     TLAYGRKPAPAELNEPASLLLPEGTYGPAFLTLKNYYVIKEYNFSDLYVLFVGHLSER
                     ISDPRPFETPWSKNTQLRTAQVETMQRTLAKLGLYKDKVDGKAGMLTRSALGAYQKAN
                     RLKVDCWPTAAVLDDMQRKAAKN"
     gene            complement(3783..4118)
                     /locus_tag="VIQ50_13545"
     CDS             complement(3783..4118)
                     /locus_tag="VIQ50_13545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361453.1"
                     /translation="MKKTLAALAAAATVATAIAATPTPADAGCWGGCAVGAGIAGFVA
                     GAIVGNAVANAAPAPAYVAGPAPGYVVYPAYAAPLPGPRCYWTRQPVYDMYGNVVGWR
                     GRPIAVCPY"
     gene            complement(4369..>4550)
                     /locus_tag="VIQ50_13550"
     CDS             complement(4369..>4550)
                     /locus_tag="VIQ50_13550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361454.1"
                     /translation="PYSYGGYYGGYYPAYSTYPAYGYPAYGYSYAPAYYGYAYAPRPA
                     FSCWRYRYGYRYRVC"
BASE COUNT          841 a         1403 c         1482 g          824 t
ORIGIN      
        1 gaagaagcgg cgcaccaacg cacgctcgcg cgcgagcggg aatggatcgc ggcgtctccg
       61 cgcgcgcggc aggcaaagtc aaaggcgcgc tatcagcgct acgaagatct ggtgaagcag
      121 gcggccgaga agaccgcgca gagcgcacaa atcatcatcc cggtcacgga gcgcctcggg
      181 cagacggtgg tcgaattcga ggggctcagg aagggctatg gcgacaacct gctgatcgat
      241 gatctcacgt ttcgactgcc gccaggtggt attgtcggca tcatcggtcc gaacggcgcc
      301 ggcaagacga cgctgttccg gatggtcgtc gggcaggaga agccggacaa gggcagcatc
      361 aaggtcgggg agacggttca tctcggctac gtcgatcaat cccgcgacac gctggatggc
      421 aaaaagaacg tgtgggaaga gatctccggc ggggaggaca tcattcagct cggcaagcgc
      481 gaggtgaact cgcgcgctta ctgctcgaac ttcaatttca aaggcgcgga tcagcagaag
      541 aaggtcggtt cgctctcggg cggcgagcgc aaccgcgtgc acctcgccaa gatgctcaag
      601 tccggtgcca acgtgctgct gctcgacgag cccaccaacg atctcgacgt cgatacgctg
      661 cgcgcactcg aggaggcgct cgaggatttc gccggctgcg ccgtcatcat cagccatgat
      721 cgctggttcc tcgaccgcat cgccacgcac attctcgcgt tcgaaggcga cagtcatgtc
      781 gagtggttcg agggcaactt ccaggactac gagcgcgaca agatgcggcg gcttggaacc
      841 gattccatcg tcccccatcg catcaaatac aaaaagttct cgcgctgatg agcgaagact
      901 ggagcgcgcg ccaatacctc aagttcgagg atgagcgcac gcgcccgccg cgcgatctcc
      961 tggcgcaggt gccgctcagg tcggcgcgcc gcgtgttcga tctcggctgt ggtcccggca
     1021 attccaccga gcttctcgtg caacgctatc cgcgcgcgca ggtgaccggg gtggactcct
     1081 cgcccgacat gctccgccag gcgcatcagc gactgcccaa ttgcgagttc gttcaggccg
     1141 atctcgcgca ttggagcccg ccggagcaca ccgaactctt atttggcaat gcggtgtttc
     1201 agtgggtccc cgaccatccc gcggtgttcc ggcgcttgct cgccgcgctt ccggcgggtg
     1261 gtgtcctggc agtgcagatg cccgataaca cccaggaacc ggcgcttgcg atcatgcgtg
     1321 aggtcgcggc aagcggagca tgggcggcgc cactcgcgca ggcagcggcc gcgcgcgacg
     1381 atctcccgac accggcggat tattacgatt tgcttggctc gctttgtgcg cggctcgaca
     1441 tctggcacac cgcctataat catgtgatgg cggggaccga ggcggttgtc gaatggttca
     1501 agggttcggc cctgcggccg tttctgtcgc cgctcgatga gtccatgcgg cgcggcttcc
     1561 tcgccgagta cactacgcga atcgcaagcg cttatccgcc acggcacgat ggccgtgtcc
     1621 tgttgcggtt tccgcgcctg tttatcgtgg cgatgcggtg agccgcggca aaggcaagag
     1681 ctcatcgccg cgggagacct gcgagagata tcgaaaacta cgtcgtgccc gagcttttgc
     1741 tcttcacgcg caccttggtc gcgatcgggc cggtatcgcc catgtcctcg ttataggaga
     1801 cgtcctgtcc cctctcgagc tggtcgaaat cgccggagag cagcgcgttg cggtggaagt
     1861 agagcaagcc gccctctttc gtaagcagga agccgaaatc ctgctcgggc gtgatttcgg
     1921 cgatctggcc cagtgactgg ttctcggtgt cgtgatcgct ggccttggtg cggccgtcgc
     1981 gctgctcttt cagatcgagc agttgccgct cggcgatgcg gaaggcctcg ttgatggctt
     2041 tgtgcaaatc tggatgccga tatttgcgca agaggtgctc gggctcgtgg ctgacgacga
     2101 gatcgttgcg gccgggaatg ccgagctcga tgtggaccac cgggggaatg gtgccgctca
     2161 gatccttggc gcgctggtcg atgcggaccc ggcaggagat gagccggccg tagatcctct
     2221 ccaggtcggc gacccgggcg cgaatttcct gctccgccca ctgtgaactt tcgatattat
     2281 gaaacgcgat ctccagtgga acttgaagca ccggcggctc catatcttgg gcactttttc
     2341 gtcttttatt aacgtccggc cgcctcgaat cgttgcagcg gatgaccgca acggaggagg
     2401 ggcagcgttg tcgtgcgata tcaaaggaaa gcgcagtcac atgggtcgag ttggtacgta
     2461 tacagctatc gtcgtgggtc tttggcttgc ggcagccgcg ctcgcctctg cacgagcggc
     2521 tgacccgagc tttcaaaaat ggctcgagga cttgtggccg caggcgcaga cgctgggcat
     2581 ctcgcgcggc accttcgata cggcgacgcg cggggtcgag cctgatctga cgctgcctga
     2641 tctcgatctt ccgggccggg aaggcgcgcc gccgcgcggg caggctgaat tcgtgcagac
     2701 gccggccgac tacatcaagg agtcgaacat ctcctacctc gccgcgcagg gcaaaaagct
     2761 cgccgccgag catgcccgga cgcttgccgc gatcgagcag cagttcggcg tgccgggcaa
     2821 tatcctcctc gcgatctggg ggcgcgagac cgcgtttggc ggctacaagc tgccgaagaa
     2881 cgccatcacc gtgctcgcca cgcagggata ttacggccgg cggaaggact tctttcggca
     2941 ggagctgctg tacgcgctca agatgctgga ggaagggcac gtcaagctcg ccgatatgcg
     3001 cagctcctgg ggcggcgcca tgggtctgac ccaattcctg ccctcggagt tctacaaata
     3061 tgccgtcgat ttcgacggcg acggcaagaa ggatatctgg aaatcggtgc ctgatgcgct
     3121 tgcctccgca gcgcagcagc tcgtcggcaa gggttggcag cgcggcacgc gctgggctta
     3181 tgaggtgcac gcgccgcagg gtgtggactg caccattggc gtgcccgagg tcactcgccc
     3241 gctcggcgaa tggctcaagc agggatttac gctcgcatat ggccgcaagc ccgctcctgc
     3301 cgagctcaac gagcccgcgt cgctgctcct gcccgagggc acttacggac cggcgtttct
     3361 cacgctcaag aattactacg tcatcaagga atacaatttt tcggatctgt acgtgctgtt
     3421 cgtcggccat ttgagcgagc gcatcagcga cccgcgtccg ttcgagacgc cgtggagcaa
     3481 gaacacgcag ctgcgcaccg cgcaggtcga gacgatgcag cgtacgcttg ccaagctcgg
     3541 cctctacaag gacaaggtcg acggcaaggc gggtatgctc acgcgctcgg ccctgggcgc
     3601 gtatcagaag gcgaaccggc tcaaggtcga ttgctggccc accgccgccg tgctcgacga
     3661 catgcagcga aaggcggcga agaactaagt ccgccggcgt tatcgccgcg cgattgcgac
     3721 aaacgaaaac ccggcgggtc gagcacccgc cgggtttgat cgtcgagcgg cgtgcgccgc
     3781 gactaatatg ggcagaccgc gatcgggcga ccccgccatc cgaccacgtt gccgtacatg
     3841 tcgtacaccg gctggcgcgt ccagtagcat cgcgggccgg gcagcggtgc cgcataggcg
     3901 ggatagacca catatcccgg cgcgggtccg gcgacgtagg ccggtgcggg tgcggcgttg
     3961 gcaactgcgt tgccgacgat cgcgcccgca acaaagccgg caattccggc accgaccgcg
     4021 catccccccc agcagccagc gtccgccggc gtcggcgtcg cggcgattgc agttgccacg
     4081 gtcgcagccg cagctaatgc agcaagtgtc ttcttcatca acatctcctt gagcatcggc
     4141 gattgccgag cgttgagcgt cggcgattgc cgagcgcagt ccctctgtat tgcgatgagt
     4201 ggccccgaac tgagcgatcc cccgaagttc agccgtcccg gatcttgcca gttaatttgt
     4261 cggaatttgg tcagtcctgc gacggcgcga caaccgtttg cagccaaaaa aaggccggcg
     4321 ccactcgtga gcgagcgcgc cgggtcaggc tcgcgaggcg atagccgttc agcatacgcg
     4381 ataacggtag ccgtaccggt agcgccagca gctgaaagcg ggccgaggcg cataggcata
     4441 gccgtaatag gctggcgcgt agctgtagcc gtacgccggg tagccgtacg cgggataggt
     4501 agagtacgcc ggataatatc cgccgtaata tccgccgtag gaatacgggc
//
LOCUS       DATCWM010000687         3313 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_15745, whole genome shotgun sequence.
ACCESSION   DATCWM010000687 DATCWM010000000
VERSION     DATCWM010000687.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3313
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15745"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..754)
                     /locus_tag="VIQ50_13555"
     CDS             complement(<1..754)
                     /locus_tag="VIQ50_13555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase"
                     /protein_id="HEY9361455.1"
                     /translation="MLLPRDGMCAAASRGYEFPGFDAYLAALASPDRDDIAALALTLG
                     ILCFAVVSAVLFLRTRRHLAAVEAAARDEALAAKAAIDRAYALLLSEPQILVAWPAAT
                     DEPEIIGDPGFVTAAHAGVLEFGVWLEPDAARDMGHSVDALRTHGLSFAKTAATLAGR
                     IIEAKGQVIGGRAILRLREVSGIKSELAELARRHHKHVEDTAALRALIAAIVAPVWAR
                     DEAGKLTFANEAYARAVEVKDSSEVIECGIELF"
     gene            complement(1083..1946)
                     /locus_tag="VIQ50_13560"
     CDS             complement(1083..1946)
                     /locus_tag="VIQ50_13560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007753006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEY9361456.1"
                     /translation="MADIPRLNGVIRALEAGKPAFTSFCQADPETAIAMSTAKYDGIV
                     YEMEHNPWDIRALRDSLQYMLNRGQIAKSGSLAPSVTPMVRIPPNGAEKAQFHAKQAL
                     DLGAYGIVWPHISSVEEAQNAVAACRYPRLKSAPMYEPAGIRGDGPTTAVRYWGLSQQ
                     DYYARADVWPLNPHGEVFVILMMEDTRGIEALSDILTKVPGVGAILIGEGDLSQELGY
                     PRQYEHPEVLKWMARVVDICKQHNVVVGHPHVDANNVERILAEGYRFLMAAPVRSYAA
                     LDKGLKLAGRA"
     gene            2066..3103
                     /locus_tag="VIQ50_13565"
     CDS             2066..3103
                     /locus_tag="VIQ50_13565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9361457.1"
                     /translation="MIIDCHGHYTTEPKDLLRWRKEQVDNVKEPAKQPSKSSLKVSDD
                     EIRESLEGAQLKLQRERGTDLTIFSPRAMGMSHHIGDYNVSLGWSQVCNEMIHRVCTL
                     YPNNFIGVCQLPQSPGVSPDSCIGELERCVKEFGFVGCNLNPDPSGGHWTAPPLTDRW
                     WYKLYEKMVELDVPAMVHVSASCNPNFHGTGAHYINADTTAFMQLIMGDLFKDFPTLK
                     LIIPHGGGAVPFHWGRYRGLAINNKRPPLDEMMKNNVWFDTCVYHQPGIDLLTKVVPI
                     ENILFASEMVGAVRGKDPQTGYDFDDTKRYVEGAPGLSVDDKKKIFEGNALRAYPRLK
                     SRLSARTAART"
BASE COUNT          610 a         1051 c         1064 g          588 t
ORIGIN      
        1 cgaacagttc gatcccgcac tcgatcacct cggaggaatc cttgacctcc acagcgcgcg
       61 cgtaggcctc gttagcgaag gtgagcttgc cggcctcgtc gcgtgcccac actggcgcga
      121 cgatcgctgc gatcaaggcg cgtagggcgg ccgtatcctc gacgtgcttg tggtgccgtc
      181 gtgcgagttc ggccaactcg gatttgatgc cgctgacctc gcgtagccgc aggatcgctc
      241 ggccgccgat cacttggccc ttggcttcga taattcggcc ggcgagcgtg gctgccgtct
      301 tggcgaagct gagcccgtgc gtgcgtaacg cgtcgaccga atgccccatg tcgcgtgcgg
      361 cgtcaggttc gagccaaacg ccgaactcga gcacccctgc gtgcgctgcg gtcacaaatc
      421 ccggatcgcc gatgatttcc ggctcgtcgg ttgcggccgg ccaggcgacc aggatttgcg
      481 gttcggacag gagcagcgcg taagcgcggt cgatcgcggc cttggctgcc agcgcctcgt
      541 cacgcgccgc cgcctcgacc gcggccaggt gccgacgcgt gcgcaggaag aggactgcgc
      601 tgacgacggc gaagcagagg atgccgagcg tgagcgcaag cgcagcgata tcgtcgcggt
      661 ctggcgacgc gagggctgcg aggtaggcgt cgaagcccgg gaattcgtag cccctgctcg
      721 ccgcggcgca catgccgtcg cggggcagca gcaccgatat ggccgcgatg ccggcacgga
      781 acccactccg acaccgggct acggatgcgc gcgcacgagc tttgtgctgc ggatgagccc
      841 caaagccctc cacggtgatc cggatcgcgt ccggcattcc cgcttgcccc attgccgcat
      901 tttccgacgt cgggcgactg ccggcttgcg gatcgcgcgg cgaagggcct ccttccgccg
      961 agcggtccgc gaatcaaggc actctacccc taagaggatt tgcgccggaa gtgggccaga
     1021 tcgtgaacag ccagaagcga ctccaggagg gtcactcctt ccgcgtcgcc tcacatccaa
     1081 gcttatgccc ggccggcgag cttgagcccc ttgtcgaggg cggcgtaact gcgcaccggc
     1141 gcggccatca agaagcgata cccctcggca aggatccgtt ccacattgtt ggcatcgacg
     1201 tgcgggtggc caacgacgac gttgtgctgc ttgcagatat cgacgacccg cgccatccat
     1261 ttgagcacct cgggatgctc gtactgtcgc gggtaaccaa gttcctggga cagatcgcct
     1321 tcgccgatga ggatcgcgcc gacgccgggc accttcgtga ggatgtcgga tagcgcctcg
     1381 atgccgcgag tgtcctccat catcaggatg acaaacactt cgccgtgggg attgagcggc
     1441 cacacgtcgg cacgggcgta atagtcctgc tgcgagagcc cccaatagcg cacggcggta
     1501 gtcggcccgt cgccgcggat gccggccggc tcgtacatgg gcgcgctttt gaggcgcgga
     1561 tagcggcagg cggccaccgc gttttgggcc tcctccaccg atgagatgtg cggccacacg
     1621 atgccatagg cgccgaggtc gagcgcctgt ttggcgtgaa attgcgcctt ctctgcgccg
     1681 ttgggcggga tgcgcaccat cggcgtgact gagggggcga gcgagccgga cttcgcgatc
     1741 tggccgcggt tgagcatgta ttgcaggcta tctcgcagcg cccggatgtc ccatggattg
     1801 tgctccattt cgtagacgat gccgtcgtat ttggccgtgg acatcgcgat cgccgtctcc
     1861 ggatcggctt ggcaaaatga cgtgaatgcc ggcttgccgg cctccagcgc gcggatcacg
     1921 ccgttcaaac gcggaatatc ggccatgctt ttcccctgcg gtcaggtcgg cccgtatcct
     1981 aacagacgcc aatcctggtt tgacaatgat gaaggtcggt tcgtagcatt caccgggtac
     2041 gaattctaac gagcgcgacg atgtcatgat catcgactgc cacggacatt acacgaccga
     2101 accgaaggac ctcctgcgat ggcgcaagga gcaggtggac aacgtcaaag agcctgccaa
     2161 gcagccgtcc aaatcgtcgc tgaaggtttc cgacgacgag atccgcgaga gcctcgaagg
     2221 cgcgcagctc aagctgcagc gcgagcgggg caccgacctg acgatctttt cgccgcgcgc
     2281 catgggcatg agtcaccaca tcggcgacta caacgtgagc ctgggctggt cgcaggtgtg
     2341 caacgagatg atccatcgtg tctgcacgct ctatcccaac aatttcatcg gcgtatgcca
     2401 gttgccgcag tcgccgggtg tgtcgccgga cagctgcatc ggggagctcg agcggtgcgt
     2461 aaaggaattc ggcttcgtcg gctgcaacct caaccccgat ccctcgggtg gtcattggac
     2521 cgcgccgccg ctgaccgatc gctggtggta caagctatat gagaagatgg tcgagctcga
     2581 cgtgcccgcg atggtgcacg tcagcgcctc gtgcaatccg aacttccacg gcaccggcgc
     2641 gcattacatc aatgccgaca cgaccgcgtt catgcagctc atcatgggcg acctgttcaa
     2701 ggatttcccg accttgaagc tgatcatccc gcacggcggc ggggcggtgc cgttccattg
     2761 gggccgctat cgcggcttgg cgatcaacaa caagcggccg ccgctcgacg agatgatgaa
     2821 gaacaacgtg tggttcgaca cctgtgtcta tcatcagccg gggatcgatc ttttgaccaa
     2881 ggtggtgccg atcgagaaca tcctgttcgc atccgaaatg gtcggcgcgg tgcgcggcaa
     2941 ggatccgcag acgggatacg atttcgacga tactaagcgc tatgtcgagg gggccccggg
     3001 gctttcggtc gatgacaaga aaaagatctt tgagggcaat gcgctacgcg cctatccgcg
     3061 cctcaagagc agattgtccg cccggaccgc agcgcgcacg taagcaagcc acgaggatcc
     3121 ttttccgccc ggcgcagcca gccaagggct gttgccgacc gttttcggcg gcacggctgg
     3181 ctgccgaact aaatgaagcg gaaggtgcga gcgagctgaa acacggagag aaccacgatc
     3241 agcaggccga cggcgaccat caacgtccgg ggccatatgt gcttcaccgc ccagccaccg
     3301 aacggcgccg cca
//
LOCUS       DATCWM010000688         4800 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_291319, whole genome shotgun sequence.
ACCESSION   DATCWM010000688 DATCWM010000000
VERSION     DATCWM010000688.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4800
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_291319"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1602
                     /locus_tag="VIQ50_13570"
     CDS             <1..1602
                     /locus_tag="VIQ50_13570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018262297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY9361458.1"
                     /translation="YTAAVEPSVSNMGYITTLLTAAERRKAGAKNGAQATASITLDPL
                     GSVTVQVASTPQGQGHRTVLSQVVADVFGLSMTDVRVTTDLDTGKDAWSIASGNYSSR
                     FAPAVAGATHLAASRLRHKLSRIAAARLNVRPEDLVFAGGKVVAKTNPDAAISFSRLA
                     AISHWAPGLLPDEMSDTIRETVFWTPPQLTAPTDADEINSSLCHGFIFDFCGVEVDRI
                     TGKVRIDRYVTTHDCGRILHPGMVEGQIRGGFAQAVGAAFYEELSYGDDGSFLSGTFA
                     DYLLPTITEVPDLTVLHIESKSPFTPLGSKGVGEGNCMSTPVCLANAVADALDLATID
                     LPLTPTKLAAGVSGDEPLPPKGTTAPLRVAKPGDRTMTGAGEARVQAAPAAVWAMLLD
                     ADVLVSLIPGSYGVKKLSETHFVADVTLGVGPVKGRYKAEVRLSDLDPPWSATLTGTV
                     VGTLGSGRGNGRVTLTPDCDGGTIIAYTYQTALGGKVAAVGGRLLDGAARVIFKQFFA
                     ALARKAGGARPGWTARLLALIGLRR"
     gene            1599..2426
                     /locus_tag="VIQ50_13575"
     CDS             1599..2426
                     /locus_tag="VIQ50_13575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HEY9361459.1"
                     /translation="MKPPAFDYIRARTVDEITATLQEHGSEARVLAGGQSLIAMLNMR
                     LARPALLVDLMRVEPLAQIIEETDAITIPAAVRQSAAMVHPALKRDVPLLAAALPWVG
                     HLQTRSRGTICGSVAHADPSAEIPLCLVALEGEVRLLTRRKRRRITAEAFFTGMMSTD
                     REDDELVEAVAYPKRRPGAGYAFIEVGRRHGDFAIVACAAVVDAARMRLAVAGVADRP
                     TARDFPLLEGTALDDALNAFAWELRGSDDIHATARYRRELVRKLGRKVVLEAAACRR"
     gene            2414..2923
                     /locus_tag="VIQ50_13580"
     CDS             2414..2923
                     /locus_tag="VIQ50_13580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEY9361460.1"
                     /translation="MPTLNPYRRHQVSFTLNGKATSMEVESRILLCDALRHIVGATGT
                     HVGCEHGVCGACTVIVDGLPARSCLMLAVQAHGCDIRTVEGLAPSPDRLSVLQAAFRR
                     HHALQCGFCTAGILMSLHAYLSTSLRPSEEELKEVIGGHLCRCTGYAPILAAALEAAA
                     TLRRESLHA"
     gene            2916..4469
                     /locus_tag="VIQ50_13585"
     CDS             2916..4469
                     /locus_tag="VIQ50_13585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY9361461.1"
                     /translation="MLDLGTSFLASVSRDPKAVAVVDGDIRLSYRDWYAKISAVVAGF
                     AELRLAAGDRLVTVLQNRWEAATLHWACQFAGVVITPINWRAKVDEIDYAVQNSGAKA
                     IAFEQVSAENVADSAACHSLARISVAQKSASSDTSFTELVAADVPPATPRVDADAISL
                     MLYTSGTTAKPKGVPRNHRAERAAAVAHVAQNLYGHGERTLGVMPLYHTMGVRLLVSM
                     SLIGGRFVCLPRFDIVEALRLIEKERITNLYLVPTLYHDIVHHEAFARSDVSSVRKLG
                     FAGVPMTDGLLAKLSDAFRPDLFVNHYGSTEIYTFTINQDAARKPGSAGRAGINQMIR
                     IVKLGASNVDEIAAPGEEGEIAALACGDEAFEGYWQRPEATAQAFRQGWYMTGDTGYA
                     DEDGDIYVTGRVDDMIITGGENVSPVEIESCLSLHPAVAEVAVVGLPDERWGKIVAAF
                     IRRRSDVAHDELDAHCRTSGLANFKRPRRYIFVREIPKSPVGKLLRRKLVGGEYEAEP
                     RPSRFHIFK"
     gene            4483..>4800
                     /locus_tag="VIQ50_13590"
     CDS             4483..>4800
                     /locus_tag="VIQ50_13590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEY9361462.1"
                     /translation="MHSPATSPDSRLQDLDGFRVEISAERERADIILDRPPFNTISMP
                     QRDQLRQVFEALDEDPRVRIIVLRSVGEHFSSGGFIRGFLEASPEHVSKLAWNIAAPA
                     RCSK"
BASE COUNT          829 a         1541 c         1507 g          923 t
ORIGIN      
        1 tacaccgccg ctgtcgaacc cagcgtgtcg aatatgggtt acatcaccac gttgctcacg
       61 gccgccgaac gccgcaaggc gggcgcaaag aacggcgcgc aggcgacggc gagcatcacc
      121 cttgacccgc tcggctcggt aaccgttcag gtcgcttcaa cgccgcaagg acaaggacat
      181 cgcacggtgc tttcgcaagt tgtcgctgac gttttcggcc tgtcgatgac ggatgttcgc
      241 gtgaccactg atctcgatac cggcaaggat gcatggtcca tcgcatccgg aaattattcg
      301 agccgcttcg ctccggcagt ggcgggagcg acgcatctgg ccgctagcag gcttcgccac
      361 aagctttccc ggatcgccgc cgcacggctc aatgtgcggc ccgaagacct tgtatttgcc
      421 ggcggcaagg tcgttgccaa gaccaacccg gatgcggcga tttctttttc acgccttgcg
      481 gcgataagcc attgggcgcc gggactgctt cccgacgaga tgagcgacac aatccgggag
      541 acggtgttct ggacgccgcc gcagctgacg gcaccgaccg acgccgacga gatcaactcg
      601 tcgctctgcc atggcttcat cttcgatttt tgcggtgtcg aggtcgaccg catcaccggc
      661 aaggtacgca tcgaccgcta tgtcacgacc cacgactgcg ggcgcatcct gcatcccggc
      721 atggtcgaag ggcagattcg cggtggtttc gcgcaggccg tgggtgctgc attctacgaa
      781 gagctgtcgt atggcgatga cggctcgttc ctctctggca cgtttgcgga ttatctgctt
      841 ccgacgataa cagaagtgcc ggacctcacg gtcctgcata tcgaaagcaa gtccccgttc
      901 acgcccttgg gttccaaggg agtgggcgag ggcaactgca tgtcgacgcc cgtttgcctc
      961 gccaacgcgg tcgccgacgc gcttgacctc gcaaccatcg atctcccgct gacgccgacc
     1021 aagcttgcag cgggcgtttc gggcgacgag ccgttgccac ccaaaggaac gacggctccg
     1081 ctcagggttg ccaagccggg cgaccgcacc atgaccgggg ccggagaggc gcgggttcag
     1141 gccgccccgg cggcggtgtg ggcgatgctg ctcgatgcgg atgtgctcgt ttcactgatc
     1201 ccgggttcct atggagtgaa gaaactctca gagactcact tcgtggcaga cgtcactttg
     1261 ggcgtcgggc cagtgaaagg ccgctacaag gcggaggtgc gtctgtcgga cctcgacccg
     1321 ccgtggtctg cgaccctgac ggggaccgtg gtcggtacgc ttggcagcgg ccgcggcaat
     1381 ggtcgagtga ccctcacgcc ggactgcgat ggtggcacga tcatcgccta tacctatcag
     1441 accgccctcg gcggcaaggt tgctgcggtc ggtggccggc ttctggatgg cgcggcgcgg
     1501 gtcatcttca aacagttctt cgccgcgctg gcacgcaagg ccggcggcgc gcgcccgggc
     1561 tggaccgcgc ggcttctagc cttaattgga ttgcgccgat gaagccgccc gcgttcgatt
     1621 acatccgcgc ccggacggtg gacgaaatta ccgcaaccct gcaggagcac ggcagcgaag
     1681 cccgcgtgct cgccggtggg cagtcactca tcgccatgct gaacatgcgg cttgccaggc
     1741 ccgccttgct ggttgacctc atgcgcgtcg agccgctggc gcaaatcatc gaggagaccg
     1801 atgccatcac cattccagcg gcggtacgcc aatcggcagc aatggtgcat cccgccctga
     1861 agcgtgacgt tccgttgctt gcagcggctc ttccgtgggt cggacacctg cagacccggt
     1921 cacgcggaac aatctgtggc tcggtcgcac atgcggatcc gagcgccgag atcccgctct
     1981 gtctcgtcgc gttggagggc gaggtgcggc tgctaacacg acgcaagcgc cgccgcatca
     2041 ctgccgaagc tttctttacc ggcatgatgt cgaccgatcg ggaagatgat gagcttgtcg
     2101 aggcggttgc ctatccgaag cgtcgccccg gagctggcta tgccttcatc gaggtggggc
     2161 ggcggcacgg cgactttgcc atcgtcgcct gcgcggctgt ggtcgatgcg gcgcgcatgc
     2221 ggctcgcggt tgcaggcgtc gctgacaggc cgaccgcacg ggattttccg ctcctcgaag
     2281 gaaccgcgct cgacgatgcg ctcaacgcct tcgcctggga gctccgtggc agcgacgaca
     2341 ttcacgccac ggcgcgttat cggcgcgagc tcgtgcgcaa gctcggtcga aaagtagtgt
     2401 tagaggccgc tgcatgccga cgctgaaccc ctatcgccgc catcaagtga gcttcaccct
     2461 caacggcaag gcgacttcca tggaagtcga gtccagaatt ctgctctgcg atgcgctgcg
     2521 tcatatcgtg ggcgcgaccg gcacgcatgt gggttgcgag catggcgtgt gcggagcctg
     2581 cacagtcatc gtcgacggcc tgccggcccg ttcctgcttg atgctcgcag tccaggcgca
     2641 cggttgcgac attcgcaccg tcgagggact cgcaccgtct cccgaccggc tctcggtgct
     2701 gcaagcagcc ttccgccgcc atcacgctct gcagtgtggt ttctgtactg caggtatcct
     2761 catgtcgctg cacgcctact tgtcgacatc acttcggcca tcggaggagg agttgaaaga
     2821 ggtcattggc ggccacctct gccgctgcac cggctatgca cccattctcg cggcggcgct
     2881 cgaagctgcc gccacactgc gccgggagtc cctccatgct tgatctcgga acgagctttc
     2941 ttgcaagcgt ctcccgggat ccgaaagcag tcgccgttgt ggacggcgac attcggctga
     3001 gctaccggga ttggtacgcc aaaatatcgg cggtggttgc cggctttgcc gagctgcggt
     3061 tggcggcggg ggatcgtctc gtcaccgtgc tgcagaaccg atgggaggcc gccactttgc
     3121 attgggcttg ccagttcgcc ggcgtcgtca tcacgcccat caactggcgt gccaaggtcg
     3181 acgagatcga ttacgcggtc cagaactccg gcgccaaggc gatcgccttc gagcaggtgt
     3241 cagccgagaa cgttgccgac agcgccgcct gccatagtct cgcgcgcatt tccgtggcgc
     3301 aaaagtccgc gtcgtccgac accagtttta ccgagcttgt tgcagccgat gtacctccgg
     3361 ccacgccgcg cgtggacgcc gatgccatct cgctgatgct ttatacatcc ggcactacgg
     3421 cgaagccgaa gggcgtgccg cgcaatcatc gcgccgagcg agcagccgca gtcgctcacg
     3481 tcgcgcagaa cctttacggt cacggcgaac gcacgctcgg agtcatgccc ctctaccaca
     3541 cgatgggagt gcgcttgctg gtgtccatgt cgttgatcgg cggccggttt gtgtgcctgc
     3601 cgcgtttcga catcgtggag gcgctgcggc tgattgagaa ggagaggatc accaacctct
     3661 atctcgtgcc gacgctgtac cacgatatcg tgcatcacga ggcctttgcg cgctcggacg
     3721 taagctccgt gcggaagcta ggttttgccg gcgtgccgat gacggacggc ctccttgcca
     3781 agctgagcga cgccttccgt cccgacctgt ttgtcaatca ctacgggtct acggagattt
     3841 acaccttcac catcaatcag gatgctgccc gcaagcccgg ttcggcaggc cgcgccggca
     3901 tcaaccagat gatccggatc gttaagcttg gcgcgagcaa tgtcgatgag atcgccgcgc
     3961 cgggcgagga aggggagatt gccgctctcg cgtgcggcga cgaagccttc gaaggatatt
     4021 ggcagcgtcc tgaagccacc gcgcaggcgt tccggcaggg ctggtacatg acgggcgata
     4081 ccggctacgc ggacgaggac ggcgatatct atgttaccgg ccgggtcgac gacatgatca
     4141 tcaccggtgg cgagaacgtc tcaccggtag agatcgaaag ctgcctctcg ctacatcctg
     4201 ccgtcgcaga ggtggctgtc gtcggacttc ccgacgaacg ctggggcaag atcgtggccg
     4261 ccttcattcg gcggcgctcc gatgttgccc acgacgagct cgacgcgcat tgccggacct
     4321 cgggccttgc caatttcaaa cggccgcgcc gctacatctt cgtccgcgaa attccgaagt
     4381 ctccggtcgg caagctgctg cgccgaaagc tggttggggg cgagtacgaa gcggagccga
     4441 ggcccagccg ttttcatatc ttcaaataag agggcttgat ccatgcattc gccagcgaca
     4501 tcccctgatt cgagactgca ggatctcgac ggctttcgcg tcgagatctc tgccgagcgc
     4561 gaacgcgccg atatcattct cgaccggccg cccttcaaca cgatctcgat gccgcaacgc
     4621 gaccagttgc ggcaggtttt cgaggctctc gacgaggatc cacgcgtccg catcatcgtg
     4681 ctacgctcgg tcggcgagca cttctcatcc ggtggcttca ttcgcggatt tctcgaagcc
     4741 tctcccgagc atgtctcgaa gctggcctgg aacattgccg cacctgcgcg ctgcagcaag
//
LOCUS       DATCWM010000689         5376 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_377663, whole genome shotgun sequence.
ACCESSION   DATCWM010000689 DATCWM010000000
VERSION     DATCWM010000689.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5376)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5376
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_377663"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..121)
                     /locus_tag="VIQ50_13595"
     CDS             complement(<1..121)
                     /locus_tag="VIQ50_13595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2277 domain-containing protein"
                     /protein_id="HEY9361463.1"
                     /translation="MCRNIRTLHNFKPPATDEEILASSLQFVRKLSGFTRPSKA"
     gene            complement(253..2478)
                     /locus_tag="VIQ50_13600"
     CDS             complement(253..2478)
                     /locus_tag="VIQ50_13600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amylo-alpha-1,6-glucosidase"
                     /protein_id="HEY9361464.1"
                     /translation="MAIESVALPKLPLDAIPEARFYIPATGPTRPRRVLKHGDTFIVV
                     DSHGDIGASPGGTDGLFHCDTRFLSHLELLLNGMQPLLLGSNVRDDNTQLTVDLTNPD
                     IYFDQRLILPKDTVHVVRTIFLWGDTAYQRIAVRNYGDHAIDLRLSLLFDGDFADLFE
                     VRGLQRTKHGHTGRSFRADRAVLTYGGLDDKQRQTALNFDPQPTELTATSAAYAIHLP
                     PKAAKSMFLTVSCGSPTPPRPLPFLRGLRKAHRERIRSSQNASTVVSSNDIFNEVMCR
                     SMADLYMLMTDTPEGRYPYAGIPWYSTTFGRDGLLTALQMLWLDPRVAQGVLRRLAAF
                     QAKTADDASDAQPGKILHEMREGEMAALGEVPFGLYYGSVDATPLFVMLAGLYAERTG
                     DDAIIVELWPAIEAALSWIDGPGDLDGDGFIEYYRATERGLANQGWKDSEDAIFHADG
                     RLAEGPIALAEVQGYVYCAKQVLARCAERLGWTERARALKAEADQLAERFDASFWCPE
                     LGTYALALDGKKEPCRVRSSNAGQVLFTGIAKLDRAVEVADGLLRPQFFSGWGIRTIA
                     NTEARYNPMSYHNGSIWPHDNALIALGLARYDLKRPVARVFKGLFEAASYLEMRRLPE
                     LFCGFQRSRGRGPTHYPVACSPQAWASATPFTLIEASLGLQFDPVANQIRLLNPRLPS
                     FLDELVLRNLQLKQSSVDLKVRRHANEVSVEILERRGRIQVAVVFGRAADPSERLIDD
                     V"
     gene            complement(2489..3583)
                     /locus_tag="VIQ50_13605"
     CDS             complement(2489..3583)
                     /locus_tag="VIQ50_13605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004434621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEY9361465.1"
                     /translation="MKIAQIAPLMESVPPRLYGGSERIVSYLTDELVRLGHEVTLFAS
                     GDSVSSAHLVPCVPMALRLDDNVRDPIPYYMLMLDRVREYAEEFDILHFHIDQFHFPL
                     FRTMANRTVTTLHGRQDLHDLKPLYVGFSDMPLVSISNAQRKPIPNANFAGTVYHGIP
                     SQLLRPTYRPDGDYVAFLGRISPEKRPDRAIRIARALEIPLKIAAKVDKVDEVYFREK
                     IVPLLNQPGVEFIGEIDERAKSDFLGNARALLFPVDWPEPFGLSMIEAMACGTPVLAF
                     RCGSVPEIVDPGVTGVIVDTMDEAIRMLPQVLALDRRAVRQRFEHRFSVARMAKDYVH
                     VYRTLLRRASLPERDATVARLQPELEKGMN"
     gene            complement(3680..4054)
                     /locus_tag="VIQ50_13610"
     CDS             complement(3680..4054)
                     /locus_tag="VIQ50_13610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensory rhodopsin transducer"
                     /protein_id="HEY9361466.1"
                     /translation="MEAIGRRRWAIPEGYIPSESSYSDRELVSHETACILNGADRDAH
                     VTITIFFADREPVGPYRVTVAARRTLHLRFNDLDDPKPIPRDTDYASVFESDVPIIVQ
                     HTRLDSRRAEVALLSTVAYPEG"
     gene            4247..5296
                     /locus_tag="VIQ50_13615"
     CDS             4247..5296
                     /locus_tag="VIQ50_13615"
                     /inference="COORDINATES: protein motif:HMM:NF028222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEY9361467.1"
                     /translation="MRAITVLPGIACSARLEEVDEPAESDGPVLVRTLALGVCGTDRE
                     ILSGSYGFAPPGQQRLVLGHESLGVVEIAPDGCGLVPGDFVVGVVRRPDPEPCVACAV
                     GEWDMCRNGRYTERGIKERHGYGAERFRIEPEFAIKIDPELGILGVLLEPASILAKAW
                     DHIERIGHRARAWQPKVLLATGAGPIGLLAALMGRQRGLDVHVLDHNKGGPKEAIVRD
                     LGGTYHSDPSALERLAPDILIECTGAPAVIRACLDSTAAAGIVCLTGVSEPAKMFEFD
                     IGGFNRTTVLDNNVVFGIVNANRRHYEMAADALARADRAWLGRLITRSAPLERWSEAL
                     EHRKGDIKVIVDFRT"
BASE COUNT         1034 a         1627 c         1732 g          983 t
ORIGIN      
        1 ttgctttaga gggccgtgtg aatccgctca acttacggac gaattgcaac gaggaggcaa
       61 ggatttcctc gtccgtggcg ggtggcttga agttatggag cgtccgaatg tttcgacaca
      121 tgaatggcct cgcgcagctc acagggtctc gaccgtcgca tacgatcgcg gcggcaatca
      181 agtcgtccgc gcgaggttcg tgcgcgcatg tcatgaaggc cgcagggacc gaagctatcc
      241 gagtttccgc gatcaaacat cgtcgatgag gcgttcgctg ggatccgcgg cgcggccgaa
      301 gacgactgct acctggatgc gtcctcgccg ctcgaggatt tccactgaga cttcgttggc
      361 atgacgccgc accttgaggt cgacgctgga ttgcttcagt tgcaaattgc gcaacaccaa
      421 ctcgtccaag aacgacggca agcgcggatt gagcagccgg atttggtttg caacggggtc
      481 gaactgcagc ccgagtgaag cctcgatcag cgtgaacgga gtggcgctgg cccatgcctg
      541 cggcgagcac gcgacaggat agtgggtcgg cccgcgtcct cgactgcgct gaaagccgca
      601 gaacagctca ggcaatcgcc gcatctccaa gtaagaggcg gcctcgaaca agcctttgaa
      661 cacgcgcgcg accggccgct tcaagtcgta gcgggccaag cccaacgcaa tcagcgcgtt
      721 gtcgtgcggc cagatcgagc cgttgtgata cgacatgggg ttatagcgcg cttcggtatt
      781 ggcaatggtg cgaatgcccc atccggaaaa gaattgcggc cgcagcaggc cgtcggctac
      841 ctcgaccgcc cgatcaagct tggcgatgcc ggtgaacaga acctggccgg cattcgagct
      901 gcgtacgcgg cacggttctt tcttgccgtc gagggcgagc gcgtaggtgc ccagctccgg
      961 acaccagaag ctcgcgtcga atcgttcggc cagctgatcc gcttcggctt tgagcgcccg
     1021 cgcccgctcg gtccatccga gccgctcggc gcagcgtgcg agaacctgct tagcgcaata
     1081 gacgtaaccc tgtacctcgg ccagcgcgat tggaccttct gccaggcggc catcggcgtg
     1141 gaaaatagcg tcttcggagt ccttccaacc ttgattggcg agcccacgct cggttgcgcg
     1201 gtagtattcg ataaagccgt cgccatcgag atcgccgggg ccatcgatcc aggagagcgc
     1261 cgcttcgatc gccggccata gctcgacgat gatggcgtcg tctccggtcc gctcggcgta
     1321 aagcccagcc agcatcacga acagcggcgt ggcatcgacg ctgccgtagt aaaggccgaa
     1381 tgggacttcg cccaacgcgg ccatctcgcc ttcgcgcatc tcgtgcagga tttttccggg
     1441 ctgcgcgtcc gaggcgtcgt ccgcggtctt ggcctgaaag gcggcgaggc gccgcagcac
     1501 gccctgcgca acgcgcggat cgagccaaag catctgcagc gcggtgagca agccgtcgcg
     1561 gccgaaggtg gtcgagtacc agggaatacc ggcgtaggga tagcgtccct cgggcgtgtc
     1621 agtcatcagc atgtagagat cggccatcga tctgcacatg acctcgttga agatgtcgtt
     1681 tgagctgacg acggtgctgg cattttgcga actgcggatg cgctcgcggt gggccttgcg
     1741 caacccgcgc aggaacggca acggtctcgg cggggtcgga ctcccacaac tgaccgtcaa
     1801 gaacatcgat ttcgccgcct ttggcggcag atggatcgca taagccgcgc tcgtcgccgt
     1861 caactccgtg ggctgcggat cgaaattcaa cgctgtttgt cgctgcttgt cgtcgagccc
     1921 gccgtaggtc aggaccgccc ggtcggccct gaagctacgg ccggtgtgac cgtgtttggt
     1981 tcgctgcaag ccgcgcacct cgaacaaatc ggcgaaatcg ccgtcgaaaa gcaggctcag
     2041 gcgcagatcg attgcgtgat cgccgtagtt gcggaccgca atccgctggt aggcggtgtc
     2101 gccccagaga aaaatcgtgc gcacgacatg caccgtatcc ttcggcagaa tcagccgctg
     2161 gtcgaaatag atatccggat tggtcagatc gaccgtgagc tgcgtgttgt cgtcacgcac
     2221 gttcgagccg agcaacaagg gctgcatgcc gttgagcaaa agctcgagat gggagagaaa
     2281 gcgggtgtcg cagtgaaaga gcccgtccgt gccgccgggc gaggcgccga tgtcgccgtg
     2341 actatcgacg acgatgaagg tatcgccgtg cttgagcacg cggcgcggcc gtgtggggcc
     2401 cgtcgcgggg atgtagaacc gtgcctcggg aattgcatcc agcggcaatt tcgggagcgc
     2461 gacgctctcg atcgccatga aacccctgtc agttcattcc cttttccagc tccggctgca
     2521 gccgtgccac ggtagcatcg cgctcgggga gggaagcccg tctcagcaat gtacgataca
     2581 catgtacata gtcctttgcc atccgggcaa cggaaaagcg atgctcgaac cgctggcgga
     2641 ccgcccgccg gtcgagcgcg agaacttgag gcagcatcct gatcgcttcg tccatggtat
     2701 cgacgatcac gcctgtcacg ccggggtcga cgatctccgg gacggagccg cagcggaagg
     2761 cgaggaccgg cgtcccgcag gccatcgcct cgatcatgga caacccgaaa ggctccggcc
     2821 agtcgacggg gaatagcagc gcccttgcat tacccaagaa gtcgctcttg gcgcgctcgt
     2881 cgatctctcc gatgaattcc acgcccggtt ggttgagcag cgggacgatc ttctcgcgga
     2941 aatagacttc gtcgactttg tcgaccttgg cagcgatctt gagtgggatt tcgagcgcgc
     3001 gcgcgatccg aatcgcccgg tccggccgct tctcgggcga gatgcggccg aggaaggcca
     3061 catagtcgcc gtcaggccgg taggtgggcc tgagtagctg gctgggaata ccgtgataga
     3121 cggtacccgc aaagttcgcg ttggggatcg gcttgcgttg cgcgttggag atcgacacca
     3181 acggcatgtc gctgaatcca acatagagcg gcttgagatc gtgcaggtct tgccggccgt
     3241 gaagggtcgt cacggtccgg ttggccatcg tccgaaacaa cggaaaatga aactggtcga
     3301 tgtggaagtg aagaatgtcg aattcctcgg cgtattcccg cacgcggtcg agcatcagca
     3361 tgtaatacgg aatcgggtca cgaacattgt cgtcgagacg caacgccatc ggtacgcaag
     3421 gcaccaaatg ggcgctggaa acggagtccc cgctcgcgaa cagcgtcacc tcgtggccca
     3481 gtcggaccaa ctcatcggtg agataagaga cgattcgctc gcttccacca taaagccgcg
     3541 gcggcacgct ctccatgagc ggcgcgatct gcgcgatttt catattttcc tctccaccag
     3601 gacccgttcc accaaacgtg ctgcgctgca aaaagttcca caccttcggc cgtcacagaa
     3661 tgaaaatcgg taggaaaact cacccttcag gataagcgac cgtcgataga agggcgactt
     3721 cggcgcggcg ggaatcgagt cgcgtgtgtt gaacgatgat tggcacgtcc gactcgaata
     3781 ccgaggcata gtcggtatca cgcgggatcg gtttcgggtc gtcgagatca ttgaagcgca
     3841 agtgcagtgt gcgccgggcg gcgacggtga cgcgataggg accgaccggc tcgcggtcgg
     3901 cgaagaaaat cgtaatagtc acgtgggcgt cacgatcggc gccgttgaga atgcaggcgg
     3961 tttcgtggga aaccagctcg cggtcggaat acgaactttc ggaggggatg tagccctccg
     4021 ggatcgccca tcgccggcgt ccaatggcct ccataatcgt ccctcgtttc ccatcaaatt
     4081 tcccatcaag aagtcataac gccgtcgacc cggctttcgt ttcaacgcgg gggaacattt
     4141 ttcgccgtcc tgcgtaaacg gtagggcaac cgcgctcgga gcgccggtgt agccgaggcg
     4201 cctgcagccg ccgcgcgatc gcaaatcgag gcagtccaag gcagcgatgc gtgcaatcac
     4261 cgttttgccc ggtatcgctt gctcggcgag gctcgaggag gtcgatgaac cggcggagtc
     4321 cgatggccct gttttagtgc gcaccttggc cctgggggtg tgcgggaccg atcgcgaaat
     4381 tctcagcggc agctatggct ttgctcctcc cggtcaacaa cgccttgttc tcggccatga
     4441 atcgctcggc gtcgtcgaga tagcaccgga tgggtgcggg ctcgtgcccg gcgatttcgt
     4501 cgtcggggtc gtgcgccggc ctgatccgga gccgtgcgtt gcatgcgccg tcggcgagtg
     4561 ggacatgtgc cgcaacgggc gctacaccga acgcggcatc aaggagcggc acggctacgg
     4621 cgccgaacgc ttccgcatcg agccggaatt cgcgatcaaa atcgatcctg aattgggcat
     4681 tctcggcgta ttgctggagc ccgccagcat tctcgcgaag gcctgggacc acatcgagcg
     4741 catcggacac cgggcgcgcg cgtggcagcc aaaggtattg ctcgccaccg gcgcgggtcc
     4801 catcggcctg cttgccgcgc tgatggggag gcagcgcggc ctcgacgtgc atgtgctcga
     4861 tcacaacaag ggcggcccga aggaggcgat cgtgcgcgat ctcggcggta cgtatcacag
     4921 cgacccgagc gcgctggaac gactggcgcc ggacatcctc atcgagtgta cgggagcccc
     4981 agccgttatc cgcgcttgtc tcgactcgac ggccgcggcg ggaatcgtct gcctgaccgg
     5041 cgtcagcgaa cctgccaaga tgttcgaatt cgacatcggc ggcttcaatc ggaccacggt
     5101 gctcgacaac aacgtcgtat tcggcatcgt caatgccaac cgacgccact acgagatggc
     5161 ggcggatgcg ctcgcccgcg ccgacagggc atggcttggg cggctgatca cgcgcagtgc
     5221 cccgctcgag cgctggagcg aggcgctcga gcatcgcaaa ggcgacatca aggtgattgt
     5281 cgacttcagg acctagcctg ccgtgccgtc tcgcatcgag gactacgcgc tgatcggaga
     5341 ttgcgaggcc gccgcgccgg tcgcgcgcta tggctc
//
LOCUS       DATCWM010000690         3383 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_215413, whole genome shotgun sequence.
ACCESSION   DATCWM010000690 DATCWM010000000
VERSION     DATCWM010000690.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3383
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_215413"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(125..1444)
                     /locus_tag="VIQ50_13620"
     CDS             complement(125..1444)
                     /locus_tag="VIQ50_13620"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018455597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEY9361468.1"
                     /translation="MQAFVGNLIQRKPRRALSPEFKHALAREVLKTERLRVIALIITA
                     MVLAAALTTADVVAPAILDRVWQGHFPILYVWAGLGGFILFEASVLALISRQLKRDLD
                     VPRVRRYVGAFIETSLPSLLLVAHMTNMGAVPALGFVAPLFYFVFIILSTLRLDFWLS
                     TFTGFVAAAELLGLALFHPAARATADDTMLAAAFLASRSAVIFACGVLAGAVGVQLRR
                     QFEASIAAATARDYVTNLFGQHVSPQVVDRLLATGSTTSSDARQVAVMFVDIRGFTAA
                     ARARTPQEVVDRLDAAFAVLVEIVDRNGGIVNKFLGDGFLALFGAPLDDPDAPRRAVT
                     AAREMLAAIEQHNVRSDWPLRIGIGLHLGHVVAGNVGSPRRKEYTVIGDTVNLASRIE
                     GLNKEFGSQLLISDTVHQAIGHDVDAAPLGDVPIRGYEQPVRVWRLA"
     gene            complement(1622..2599)
                     /locus_tag="VIQ50_13625"
     CDS             complement(1622..2599)
                     /locus_tag="VIQ50_13625"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9361469.1"
                     /translation="MRRWLLPILTALAVAATALGAQAQDYPTRQITLIAPWPAGGAVD
                     ALCRAVAPPLSDRLGKSVVVENRPGAGSVIGTAAGAKATPDGYTMVMAGSGSLAISAT
                     MYKKLPYDPVKDFVPLALGGRIPFVLVANPSLPVRSVAELVQYAKDHPGMLSFASGGP
                     GSPHHLYGELLKSMTGIEMTHVPYKGSAPALTDVIAGHVPLLFSDTVPSLPQIREGKV
                     RALGVSTAIRLPSAPDIPPIAETGVPGFDAAGWGMFAVPAGTPKEVVSKLQAALTAVL
                     ALPDVQQQIVKLGMIPGGTASSEELERFIAAEIARWGKVVTQAGLAGTE"
     gene            complement(2690..>3383)
                     /locus_tag="VIQ50_13630"
     CDS             complement(2690..>3383)
                     /locus_tag="VIQ50_13630"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9361470.1"
                     /translation="FPAALLPTLPKVASTLWALLLDGTMLEHAGFTMYRVLFGLSLAV
                     AVALPLGIMMGRFRAVENFCLPLASALMPIPSLAWVPVFILWFGLGNTVAILIVFYAA
                     LFPMLLNAWSGVRAVNPLWLRAAGAMGADERALFWKVIIPGASPFIITGLRQAFLRAW
                     IAVVGAEMLAASDWGLGWVIFDAKEFLNADVMLAALAVIGAIGFLFERLVFGSLERAT
                     VIRWGMVRAAKG"
BASE COUNT          660 a         1100 c         1102 g          521 t
ORIGIN      
        1 ttgcccacgc gtgaataccg agcaacgcgc ctttgcccac cctacgcgct cataaattgc
       61 gataggtgag agcggcctaa attctgacgg cgggcaaact tgcctgctgc ggcatagatc
      121 gcgttcaagc caaacgccac acgcgaaccg gctgctcgta gccgcggatc ggtacgtctc
      181 cgagcggggc cgcatcgaca tcatggccga ttgcctgatg gaccgtgtca gatatcagga
      241 gctgcgaccc gaattccttg ttgaggccct cgattctgga ggccaaattc accgtgtcgc
      301 cgatcacggt gtattccttg cgccgcggtg agccgacgtt gcctgccacc acgtgcccaa
      361 gatgcagtcc tatgccaatc cgcagcggcc aatcactgcg gacattgtgc tgctcgatcg
      421 cggcaagcat ttcgcgcgcg gccgtgacgg cgcgccgcgg cgcgtcggga tcgtcgagcg
      481 gcgcaccaaa cagcgccagg aaaccgtctc cgagaaactt gttcacgatg ccgccattgc
      541 gatcgacgat ctcgaccagt accgcaaacg ccgcgtccaa tctgtcgaca acctcctgcg
      601 gcgtgcgggc gcgtgctgcg gccgtaaagc cacggatgtc gacgaacatg acggcgacct
      661 gccgcgcatc gctgctggtc gtcgagccgg tggcgagcag gcggtctacc acctggggcg
      721 aaacgtgctg gccgaacagg ttggtgacgt aatcgcgggc ggttgccgcc gcgatacttg
      781 cttcgaattg ccggcgcagt tgcacgccga ccgcgccggc gagaacgccg caggcaaaaa
      841 tgacggcact gcgcgaggcc agaaaggccg ccgccagcat cgtgtcgtcc gcggttgccc
      901 gcgcggcggg atgaaacagc gcgagtccga gtaactcggc cgctgcgaca aaaccggtga
      961 aagtcgaaag ccagaagtcg aggcgcaagg tcgagagaat gatgaagacg aaataaaaaa
     1021 gtggcgccac aaagcccagc gccggcactg ctcccatgtt tgtcatgtgc gcaacgagca
     1081 ggagactggg caagctagtt tcaatgaacg cgcctacata acgccgcacc cgaggaacat
     1141 cgagatctcg tttcagttgc cgggagatca gcgcgagcac cgacgcttcg aacaggataa
     1201 accccccaag gccggcccat acgtagagga tggggaaatg cccctgccaa acacgatcca
     1261 agatcgccgg cgcgaccacg tccgcggtcg tcaatgcggc ggccagtacc atggcggtaa
     1321 tgatgagggc gatgacacgc aaccgctcgg ttttaagaac ctcgcgggcg agtgcgtgtt
     1381 tgaactccgg cgacagcgcg cgccgtggct tgcgttgaat gagattgccg acaaatgcct
     1441 gcatgggcgt gaggcaatcc gcgttggatc ggctgagcgg gtttagccgg ggttcccctg
     1501 gtttcctgat gggtgaagat tacagcaccg catccctgac gcgccttttt tcccacccct
     1561 tcgccgggcg caccatgccc agcgcacgac ggtggcgcgc tcgcgtttcg ccgtatcagc
     1621 gctactctgt tcccgccaat cccgcctgcg tcacgacctt gccccagcgc gcgatctcgg
     1681 cggcgatgaa gcgctcgagt tcctcggacg aggcggtgcc gccaggaatc atccccagct
     1741 tgacgatctg ctgttgaacg tcgggcaagg ccaagaccgc ggtcagagcg gcttgcagct
     1801 tgctcacgac ctccttcggc gtgccggccg gcaccgcgaa catgccccag ccggcggcgt
     1861 cgaatccggg aacgccggtc tccgcgattg gcgggatgtc cggcgccgat ggcagacgaa
     1921 ttgcggtcga tacgccgagc gcacgcacct tgccttccct gatctgcggc agcgagggga
     1981 cagtgtcgga gaaaagcagc ggcacgtgcc cggcgatcac gtcggtcagc gccggcgcac
     2041 tgcctttgta aggaacgtgc gtcatttcga tgccggtcat gctcttgagc agttcgccgt
     2101 agagatgatg cggcgagccg ggcccgccgg atgcgaagga cagcatgccc ggatggtcct
     2161 tggcgtattg cacgagctcc gcgacggagc gcaccggcaa ggacggattg gccacgagca
     2221 cgaatggaat cctgcccccg agcgccagcg gcacgaaatc cttgaccgga tcgtagggga
     2281 gcttcttgta catcgtggcg ctgatggcga gcgatccgct gccggccatc accatggtgt
     2341 agccgtcggg cgtggccttg gcgccggcgg ccgtgccgat caccgagccc gcgcccggcc
     2401 tgttctccac cacgaccgac ttgccgagcc gatccgagag gggcggcgcg accgcgcggc
     2461 agagcgcgtc gaccgcgccg cccgccggcc acggcgcgat caaggtgatc tgccgcgtcg
     2521 ggtagtcctg tgcctgcgcg cccagcgccg tcgcggcgac ggcaagagcg gtgagaatgg
     2581 gcaacagcca gcgtctcatg aactcctccc acgcatcttt gtcatcgtcc tcggggtcac
     2641 gtcggtgctc cggaagtccc gccgccgcgg aagtgccaaa cgtcgagtcc tagccctttg
     2701 ccgcgcgcac catgccccag cgtatgacgg tggcgcgctc gagcgagccg aacaccagcc
     2761 gctcgaagag aaagccgatg gcgccgatca cggcgagcgc ggcgagcatc acgtccgcgt
     2821 tcaggaattc cttggcgtcg aaaatgaccc agcccaggcc ccaatcggag gcggcgagca
     2881 tctcggcgcc gaccaccgcg atccaggccc gcaggaaggc ttgccgcagt ccggtgatga
     2941 tgaacggcga cgcgccggga atgatcacct tccagaatag cgcccgctca tcggcgccca
     3001 tggcgccggc agcgcgcagc cagagcggat tgaccgcgcg cacccccgac caggcattga
     3061 gcagcatggg aaacagtgcg gcatagaaca cgatgaggat tgccacggtg ttgccgagcc
     3121 cgaaccagag gatgaatacc ggcacccagg cgagcgacgg gatcggcatc agcgcgctcg
     3181 cgagcggaag gcagaaattc tcgaccgcgc ggaagcggcc catcatgatg ccgagcggca
     3241 aggcgacggc gaccgcgagt gagagcccga acagcacgcg gtacatggta aagccggcgt
     3301 gctccagcat ggtgccgtcg agtagaagcg cccacagagt gctcgcgacc ttgggcaggg
     3361 tcggcagcag cgccgcggga aaa
//
LOCUS       DATCWM010000691         5984 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_393376, whole genome shotgun sequence.
ACCESSION   DATCWM010000691 DATCWM010000000
VERSION     DATCWM010000691.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5984)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5984)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5984
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_393376"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..914)
                     /locus_tag="VIQ50_13635"
     CDS             complement(<1..914)
                     /locus_tag="VIQ50_13635"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEY9361471.1"
                     /translation="MGRRELLAHGVPVALGQRAFEILLTLVSRHGQLVTKDELMAEVW
                     PGVVVEENNIQVHISAVRKVLAAAGDGERYLLTVAGRGYRFVAPVERASGEEAKTAEV
                     IDRSPAASAEFGAASNNLPQQLTSLIGRETDLAEIKARLSSHRLVTLTGSGGVGKTRL
                     VIEAGRGLLDRYPDGVWLAELAPLNDAQLVTSIIGEVLGVNLGATGGTLDTLASALRT
                     RQLLLIIDNCEHVIAEAARVAEALMRVCPRVSILASSRERLAIAGESIIRVPSLPAPQ
                     SSEAVTAARAPDYAAVRLFVERATALGCG"
     gene            complement(959..1405)
                     /locus_tag="VIQ50_13640"
     CDS             complement(959..1405)
                     /locus_tag="VIQ50_13640"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY9361472.1"
                     /translation="MIAMSNAGASRLVLRNDVAELERLAGWIEGFTGQGTSPDVSFAV
                     QLCLEEAVANIIMYGGAKDDAIVIAVELERNCGALVARIEDNGQQFDPTRAPPPAPAV
                     SLEQAKVGDVGIHLMRSFANGMDYERRDGRNRLTLRFVEPAAPSSE"
     gene            complement(1402..1740)
                     /locus_tag="VIQ50_13645"
     CDS             complement(1402..1740)
                     /locus_tag="VIQ50_13645"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HEY9361473.1"
                     /translation="MDISADDLAGGITKVVLRGRFDTTGAVVVELPFNKVATEKQKIV
                     VDLSAVNFLASYGIRVLLVGAKVVKSKGGSLVIVCPDNNVAKVLKTAGMDSLIPIYPT
                     EAAATAALAS"
     gene            2063..3265
                     /locus_tag="VIQ50_13650"
     CDS             2063..3265
                     /locus_tag="VIQ50_13650"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SpoIIE family protein phosphatase"
                     /protein_id="HEY9361474.1"
                     /translation="MTGNRPIGASPRILVVDDNDDNLYTLKLHLDLEGYTNIETARDG
                     EEAIARLKASAFDLVLLDVMMPKVDGFEVLSWLRDQTRLRDLPVIMISALTEMSSVAR
                     CIELGAIDYLLKPFNPVLLKARLGATLEKKRLRDEVDAHLARLQEELDSARRLQMAMV
                     PQSFPSPSPDFPIDLCASMEPAREVGGDLYDFFLTEDGRLCFLVGDVSGKGMAAALFM
                     ARTKSLIRIATDLMRSRQGSSASPAEIIARVNRELCENNDDMMFVTLFFAVLRPATGE
                     LEFCNAGHNVPYRVNGRGLAPMEGAKGIILGVCPDAVYNTGRTALAPGESIYVFTDGV
                     TEAANGDGEFFAEARLEAVLRAGAGCSTAAEIVKSVGEAVRGFVGTALPSDDITMLVV
                     RRLDSSMP"
     gene            3622..4176
                     /locus_tag="VIQ50_13655"
     CDS             3622..4176
                     /locus_tag="VIQ50_13655"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9361475.1"
                     /translation="MRRRDFIALLGSAGATWPLALRAQQPAKIPRIGIIDDAPMWHAF
                     RQALRELGYVEGQNVAYEYRYGDGSPDRLAEVAAELVRRPVDLIATFGTPPTHAAKEA
                     TATIPIVMVGVGDPVRAGLVASLARPGGNITGNTVLSPDLGPKRMQILREAIANVSRV
                     AFLINPDNASNVATLAEMRPQGSC"
     gene            4170..4574
                     /locus_tag="VIQ50_13660"
     CDS             4170..4574
                     /locus_tag="VIQ50_13660"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
                     /protein_id="HEY9361476.1"
                     /translation="MLIPVEVRGLADFEPAFAAMLRERPDALMATNDPFHQLHIGRII
                     EFLASNHLPSMYQAKENVFAGGLMAYGASVPDLFRRAAGYVHRILQGTKPGDLPVELP
                     TKFDLAVNLKTAKALGLELSPTFIARADAVIE"
     gene            4808..5788
                     /locus_tag="VIQ50_13665"
     CDS             4808..5788
                     /locus_tag="VIQ50_13665"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9361477.1"
                     /translation="MRRREFLSFLGAAAAAASGPARAQPKIRRLGVLSQGLPQTHPTP
                     VFRAFQQGLRDLGWVEGQNLAIEWRFSEGSAEQLPRLAAELVGLPVELIVASPTRPAL
                     AAKEATRTIPVIFIQVADPVQSGIVANLARPGANITGLSGMGSDLSGKRLELLKEALP
                     SARRVAVLWHRPSQGSAVVFRELELASNQLGLELKAVPVSGSDELKDAVKSAAGAQAA
                     AMMLIDDPVIASYGLEIVSLASEAALPLFSIYSEYADAGALMAYGPSLQAIYWRGATY
                     VDRILRGARPSDLPVEQPTIFELVINLQTAKALGLELAPTLLARANRVIE"
BASE COUNT         1080 a         1963 c         1875 g         1066 t
ORIGIN      
        1 ccgcagccga gcgcggtcgc gcgctcgacg aagagacgca cggcggcgta atcgggggcg
       61 cgggccgccg tcaccgcctc actcgactgc ggtgccggca aggaggggac gcgaatgatg
      121 ctttcccccg caatcgccag ccgctcacgg ctcgatgcga gaatcgacac gcgcgggcac
      181 acccgcatca gcgcttcggc gacgcgcgcg gcttcggcga tgacatgctc acaattgtcg
      241 atgatcagaa gcagctgccg cgtccgcagt gccgatgcca gcgtgtccag ggtaccgccc
      301 gtggcgccca gattcacacc caggacctcg ccaatgatcg aggttacgag ctgcgcgtca
      361 ttgagcgggg caagctcggc aagccatacg ccgtcaggat agcgatcgag caggccgcgg
      421 ccggcctcga tcacaagccg ggtcttaccg acgccgcccg atccggtgag ggtcaccagg
      481 cgatgactgc tcagccgcgc cttgatctcc gcgagatcgg tttcgcgtcc gatcaagctg
      541 gtcaactgct gggggagatt gttgctcgcc gcgccgaact cggcagacgc cgccgggctt
      601 cgatcgatga cttcggccgt tttggcctcc tcgccgctcg cgcgctcaac cggcgccaca
      661 aagcgataac cgcgtccagc gacggtgaga aggtagcgct cgccgtcccc ggctgcggcc
      721 agcaccttcc gcacggcgga aatatgaacc tggatgttgt tttcctccac cacgacgccg
      781 ggccagactt cggccatgag ctcgtccttg gttaccaact gcccgtggcg gctgaccagc
      841 gtcagcagaa tttcgaaggc gcgctggccg agcgcgaccg ggacaccgtg ggccagcagc
      901 tcccgccgcc ccaccagcaa gcggaatggt ccgaacacga aggcttcgcc catcggagtt
      961 actccgatga cggtgccgcc ggctcgacga accgcagcgt cagccgattg cggccgtccc
     1021 gtcgttcgta atccatcccg ttcgcgaagc tgcgcatcag atggatgccg acgtcgccga
     1081 ctttcgcctg ttcgagcgaa accgccggcg ccggcggggg cgcacgggtg ggatcgaatt
     1141 gctggccgtt gtcctcgatg cgagcgacta gggctccgca attgcgctcg agctcgaccg
     1201 cgatcacgat cgcatcgtcc ttcgcaccgc catacatgat gatgtttgct accgcctctt
     1261 ccagacaaag ctgcacggca aacgacacat ccggcgaggt gccttgtccg gtgaaccctt
     1321 cgatccagcc cgccagccgc tccagttcgg caacgtcgtt gcgcagcacc aggcgacttg
     1381 ctccggcatt cgacatcgca atcatgatgc cagcgccgcc gttgcagcgg cttcggttgg
     1441 gtaaatcggg atcagcgaat ccatcccggc ggtcttgagc accttggcca cgttgttgtc
     1501 ggggcacacg atgaccagac taccgccttt gcttttgacg actttggcgc cgaccaggag
     1561 cacgcgaatg ccataggagg caaggaagtt cacggcggaa aggtcgacta cgatcttttg
     1621 cttttccgtg gcgaccttgt tgaatggcag ctcgacgacc accgctcccg tggtgtcgaa
     1681 gcgcccgcgc aagacgacct tagtgatgcc gccggcgaga tcgtcagccg agatgtccat
     1741 gcagcgcctg taggttcgcc acgtatcggc agtcatagcg gcattcgcgt ccgtgcggaa
     1801 tgccgaaacc gatccggctc agaacatttc agaatgattc agcccacaag aggcttgcga
     1861 ctgcctggtt ccctttgcct tcgaggcaca caggttgacc cgaactccag gcgcattccc
     1921 gcaaaagcgg caatctcgga gtaaccgagt ctccgcctcc gcgggtacga gcaggcccac
     1981 aggcggcagt gacgccagct tctgttcgat atgcccgcaa catggtctac actccccagc
     2041 gcggcatgac gggaacagca aggtgaccgg caatcgcccg ataggagctt cgccccgcat
     2101 cctcgttgtc gatgacaacg atgacaatct ttatacgttg aagcttcatc tcgatctcga
     2161 gggctatacc aacatcgaga ccgcgcgcga cggagaagag gcgatcgcgc gcctcaaggc
     2221 gagcgcgttc gacctcgtcc tgctcgatgt catgatgccg aaggtcgacg gctttgaggt
     2281 actcagctgg cttagggacc agacgcggct gcgcgatctg cccgtgatca tgatctcggc
     2341 actgaccgag atgagcagcg tggcgcgctg catcgagcta ggcgccatcg actatctgct
     2401 caagccgttc aacccggttt tgctgaaagc ccgcctcggc gcgaccctcg agaagaagcg
     2461 gttgcgggac gaggtcgatg cccatctcgc gcgcctgcag gaggaactcg attccgcgcg
     2521 ccggctgcag atggccatgg tgccgcagtc gtttccgtcc ccgagccccg actttccaat
     2581 cgacctgtgc gcaagcatgg aaccggcgcg cgaggtaggc ggcgatctct acgatttttt
     2641 cctcaccgag gacggaaggc tatgcttcct ggtcggcgac gtttcgggca agggcatggc
     2701 cgcggcgctg ttcatggcgc gcaccaagag tcttattcgc atcgccaccg acctcatgcg
     2761 ctcgcggcag ggctcatcag catccccggc cgagatcatc gcgcgtgtga accgcgaact
     2821 ttgcgagaac aacgacgaca tgatgttcgt gacgttgttc ttcgccgtgc tcaggccggc
     2881 aaccggcgag cttgaattct gcaacgccgg ccataacgtg ccgtaccgag tgaatgggcg
     2941 agggctcgca ccgatggaag gcgccaaggg cattatcctc ggcgtttgcc cggacgcagt
     3001 ctacaacacc ggacgcacgg cgttggcgcc gggggaaagc atttatgtgt tcaccgatgg
     3061 tgtgactgaa gcggccaatg gcgatggaga gttcttcgcc gaagcgcgcc tggaagcggt
     3121 gctgcgcgcg ggcgctggat gctcgactgc cgccgaaatc gtaaagtctg ttggcgaagc
     3181 ggtccgcggc ttcgtcggca cggcactccc ttccgacgac atcaccatgt tggtggtccg
     3241 ccggctcgat tcctcaatgc cgtgagccgg ccgcgcgtct cccaagttga ctgcgccccc
     3301 cgcatctcgc cttcgccgac ccgccgtcat ccataatccg agcggtggtt atggatgtcc
     3361 gggttgccgg ggccaaatga cagcccaaaa cgcactccac ttgcggtccg aaaccgctga
     3421 cgcgtctggc ggattcagaa cgattcagat ctgtcccaat gacgaaatcc ggagcgatcg
     3481 acattgtcgc cgcaacgaag cgcggctggc cggttcgccg gcggggcgct ttggtcactc
     3541 attgcaaggt gggcggggcg cgcgttttgg cgtagctttg gggttggggg cgcgagccgc
     3601 cggccattca cgggtggcga agtgagacga cgcgacttta ttgccctgct gggcagcgcc
     3661 ggggccacct ggccgcttgc gcttcgcgca caacagccgg caaaaatccc gcgtatcggc
     3721 atcatcgacg atgcaccgat gtggcacgcc ttccgccaag ccttgcgcga actcggctac
     3781 gtggaaggcc agaacgtcgc ttatgaatac cgctacggcg atggctcgcc ggaccgccta
     3841 gcggaggtcg cggccgagct cgttcgtcgc ccggtcgact tgatcgcgac cttcggcacg
     3901 ccgccgacgc acgccgccaa agaggccacg gcgaccattc ccatcgtcat ggtcggtgtt
     3961 ggcgatccgg tgcgcgcggg cctggtcgct agcctcgccc gcccaggcgg aaacatcacc
     4021 ggcaacacag tactgagccc cgacctcggc cccaagcgga tgcagatact gcgcgaggcg
     4081 atcgcgaatg tgagccgcgt cgccttcctc atcaatcccg acaacgcctc gaacgtggcc
     4141 acactcgcgg agatgaggcc gcagggatcg tgctgatccc ggtcgaggtg cgcggcctag
     4201 ccgacttcga gcctgcattc gcggcaatgc tgcgtgagcg gcccgatgca ctcatggcga
     4261 ccaacgaccc cttccatcag ctgcacatcg gccgcatcat cgagtttctg gcaagtaatc
     4321 atctgcccag catgtaccag gccaaggaga acgtgttcgc cggcgggctg atggcctacg
     4381 gcgcgagcgt gcccgaccta ttccgacgcg ccgccggcta cgtgcaccga atcctgcaag
     4441 gcaccaagcc aggcgatctg ccggtggagc tgccgaccaa gttcgatctt gcggtcaacc
     4501 tcaagacggc caaggccttg ggcctggagc tctctccgac gttcatcgcc cgggccgacg
     4561 cagtgatcga gtagcccgcc acaaccgaag atttcatggt cttgtaagct ctttccgcgc
     4621 gtgtccccca cggcgccgat tcagaacgat tcagatccgg cccaaagact ttgcgtacac
     4681 ctcccggcaa aatccatgcg ggacttcgcg gccagccgcg gagccagagg ccgtgagttg
     4741 aattgaggct acgaacacac gcctagcgcg catcgacggg aatggacggg atgaaggcaa
     4801 acgggagatg agacggcggg aatttctcag cttccttggc gcagcggcgg ccgccgcctc
     4861 cgggcccgcg cgcgcgcaac cgaagatccg gcgactcggc gtcctgtccc agggcttgcc
     4921 ccagacccac cccacccccg tgttccgcgc cttccagcag ggtttgcgcg acctcggctg
     4981 ggtggaaggg cagaaccttg cgatcgagtg gcgcttctcc gagggcagtg ccgaacagct
     5041 gccgcggctt gccgccgagc tcgtcggcct tccggtcgag ttgatcgtcg caagcccgac
     5101 gcggcccgcg ctcgcggcca aagaggctac ccgcacgatt ccggtcattt tcattcaggt
     5161 cgcggatccc gtgcaatctg gcatcgtcgc caacctcgcc cggcccggcg ccaatatcac
     5221 cggcctgagc ggcatgggtt cggatttgag cggtaaaaga ttggagctgc tcaaggaggc
     5281 gttgccgagc gcaaggcgcg tggcggtgtt gtggcaccga cccagtcagg gcagcgcggt
     5341 ggtgtttcgc gaactggagc tggcgagcaa tcaactcggc ctcgagttga aagccgttcc
     5401 cgtctcgggc tccgatgaac tcaaggatgc ggtcaaatcc gcggccggcg cgcaggctgc
     5461 ggccatgatg ctcatcgacg acccggtcat cgcctcgtat ggcctcgaaa tcgtgtccct
     5521 cgcatccgag gcggcgttgc cgcttttctc gatttattcc gaatatgcgg atgcgggcgc
     5581 actcatggct tatgggccga gcctgcaggc gatctactgg cgcggcgcca cgtatgtgga
     5641 ccgcattctc cgcggtgccc ggccaagcga tctgccggtc gagcaaccca ctatcttcga
     5701 gctggtcatc aatttgcaga cggcgaaggc ccttggtctt gagctcgcac cgaccttgct
     5761 ggcccgcgcc aacagagtga tcgagtgagg gcaactctca cgcgtccgat ctgtcgttcc
     5821 gtggcgcgga cgaagccgcc gctgccgcgg gtcggctggg atgacgaagc gagaggtttg
     5881 aaatgaggcg gacccgggtc cacgtgacac aactccgccc agccctgata gagtggccgg
     5941 gatgagggtt gctgatttgc tcaggcgtgg cttcacctgg cgcc
//
LOCUS       DATCWM010000692         2236 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_21330, whole genome shotgun sequence.
ACCESSION   DATCWM010000692 DATCWM010000000
VERSION     DATCWM010000692.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2236
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21330"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..456)
                     /locus_tag="VIQ50_13670"
     CDS             complement(<1..456)
                     /locus_tag="VIQ50_13670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator DnaA"
                     /protein_id="HEY9361478.1"
                     /translation="MSIRPRQLALALDHAESFAREDFLSGPSNAAGLALVDAWPDWPH
                     RAVVLIGPEGSGKSHLAAIWAQAAGARLIAARALEEANLPSALATGALVVEDVAAGAV
                     DERALFHLLNLAREQDAFVLLTARAAPVAFAIRDLASRLKALPLIGMAPP"
     gene            complement(456..1514)
                     /locus_tag="VIQ50_13675"
     CDS             complement(456..1514)
                     /locus_tag="VIQ50_13675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEY9361479.1"
                     /translation="MVYGRPLAFWLATFAVLAAMLWLLHDILLPFVTGIALAYMLAPL
                     ADCAERLGMNRTLAALLIVGVLVISLIVLMLLLVPLLMQQGVALISHLPGYFTRVKEL
                     IVDSNIPWLKWLGTAESDKSFSDLVSQAASWLLSFSYSLWSGGKALVSFASVLIVMPV
                     VTFYLIRDWHPMMAKVDSWIPVGHRDTVRQLAREIDAAIGGFLRGQFGVCLVLGCYYA
                     IALMLVGLDFGLLIGLLAGVITFVPYIGSMTGLMVAASVALAQFWPDWRRIALVVAIF
                     LVGQFIEGNIVSPKFVGERVGLHPVWLIFAMFAFGYLFGFVGLLVAVPLGAAIAVLLR
                     FGLRQYFASPLYRGDKPG"
     gene            complement(1544..2089)
                     /locus_tag="VIQ50_13680"
     CDS             complement(1544..2089)
                     /locus_tag="VIQ50_13680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008961176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HEY9361480.1"
                     /translation="MSIPNLITLGRILLVPVVVWAITAGEMRVAFVLFLAAGISDAID
                     GFLAKRFGMATELGAYLDPLADKAMLVSIYVALGIAEAVPGWLVILVVSRDIMIVSAV
                     ILSWLVDKPMPLKPLLVSKLNTVAQIALACVIMGARGFGFDAATAVALLTALVTALTL
                     ISIGFYLAEWVRHMNAAETGP"
BASE COUNT          511 a          719 c          717 g          289 t
ORIGIN      
        1 gggcggcgcc atgccgatga ggggaagcgc cttgaggcgg gaggcgaggt cgcgaatggc
       61 gaacgccacg ggcgcagcac gcgcggtgag cagcacgaag gcatcctgct cgcgggcgag
      121 gttgagcagg tggaagagcg ccctttcgtc gaccgccccc gccgcgacgt cctccaccac
      181 cagcgcgccg gtcgcgagcg ccgagggcag gttcgcttcc tccagcgcgc gcgccgcgat
      241 gagccgtgcg cccgccgcct gcgcccagat ggccgcgagg tggctcttgc ccgaaccctc
      301 cggaccgatg agcacgaccg cacggtgcgg ccagtcaggc cacgcgtcga ccagcgcaag
      361 ccctgccgcg ttcgacggtc cgctcaaaaa atcctcgcgc gcaaagctct cggcatgatc
      421 gagggcaagg gcgagttgac gcggacgaat ggacatcagc cgggcttgtc ccctcggtag
      481 aggggactcg cgaaatattg ccgcaagcca aatcgcaaca gcacggcgat cgcggccccc
      541 agcggcaccg cgaccagaag accgacgaag ccgaagagat aaccgaacgc gaacatggcg
      601 aagatcaacc acaccggatg caatcccacc cgctcgccga cgaacttggg cgagacgatg
      661 ttaccctcga tgaactgacc gaccaggaag atggcgacga cgagcgcgat ccgcctccaa
      721 tcaggccaga attgcgcgag cgccacgctc gccgcgacca tcaggccggt cattgatccg
      781 atgtaaggaa cgaaggtgat cacgccggca agcagaccga tgagcagccc gaaatccaat
      841 cccaccaaca tcaaggcgat ggcgtagtag cagccgagca cgaggcagac accgaattgt
      901 ccgcgcagga agccgccgat cgccgcgtcg atctcgcggg caagttggcg cacggtgtcg
      961 cgatggccca ccggtatcca gctgtcgacc ttggccatca tcggatgcca gtcgcggatc
     1021 aagtaaaacg tcacgaccgg catgacgatg agcacggatg cgaatgagac cagcgccttt
     1081 ccaccgctcc acaaggagta ggaaaagctg agaagccagg aggccgcttg gctgacgaga
     1141 tcggaaaagc tcttgtccga ctcggcggtg ccgagccact tcaaccaagg tatgtttgaa
     1201 tcgacgatca actctttgac ccgcgtgaaa tagccgggaa ggtgggagat caaagccaca
     1261 ccctgctgca tcaacaacgg aacgagcagc agcatcagca cgatgagcga gatgaccaag
     1321 acgccgacga tcagcagcgc ggcgagcgtt cggttcatcc cgaggcgttc cgcgcagtcg
     1381 gcaagcggcg cgagcatgta ggcgagcgcg ataccggtca cgaacggaag caggatgtcg
     1441 tgcagcaacc atagcatggc cgcgagcacg gcgaaggtcg cgagccagaa cgcgagcggg
     1501 cggccgtaga ccatcggatc actccccctg gcatctcgcg cggtcagggg cccgtttcgg
     1561 cggcgttcat gtggcgcacc cactcggcga gatagaagcc aatggaaatc aaggtcaagg
     1621 ccgtgaccaa tgccgtcagc agcgccaccg cagtggcggc atcgaacccg aagccgcgtg
     1681 cgcccatgat gacgcaagcg agcgcaatct gtgcaaccgt gttgagcttg gagacgagaa
     1741 gcggcttaag cggcataggc ttgtccacca gccacgataa aatcaccgcg ctgacgatca
     1801 tgatatcgcg cgagacgacg agaatgacga gccagccggg aaccgcctcg gcgataccga
     1861 gggcgacgta aatcgaaacc agcatggcct tgtcggcgag cgggtcgagg taagcgccga
     1921 gctcggttgc cataccgaag cgtttggcga ggaagccgtc gatggcatcg ctgatcccgg
     1981 cggcgagaaa cagcacgaag gccacgcgca tctcgcccgc cgtgatcgcc cagaccacga
     2041 ccggcaccaa gaggatgcgg cccagcgtaa tgagatttgg aatgctcaaa tcagcgcccc
     2101 ggctcggccg ccagccccat cgtcaccacc cgccctcgca tgcggccatg cggcggctca
     2161 gtatagccgc gaccaagcca ttgcacaggc agggattccc aagtacgcaa acgccgcgaa
     2221 ggaggctggt ccggcg
//
LOCUS       DATCWM010000693         3397 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_199520, whole genome shotgun sequence.
ACCESSION   DATCWM010000693 DATCWM010000000
VERSION     DATCWM010000693.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3397)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3397)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3397
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199520"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..468
                     /locus_tag="VIQ50_13685"
     CDS             <1..468
                     /locus_tag="VIQ50_13685"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9361481.1"
                     /translation="TNLAGELFKQLIGAPDIVHVPYKGAAPGVADLASGHIPMMTPNV
                     GAPLIEFHRAGKVRILAVNAAKRIKAAPDIPTAVEAGLPGMIAGNLNGLFAPAGVAEA
                     TRQTMADADVQRILVASGFEPITDSGPEATRQFIAEELARWTSVMKATGLKMG"
     gene            527..1063
                     /locus_tag="VIQ50_13690"
     CDS             527..1063
                     /locus_tag="VIQ50_13690"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEY9361482.1"
                     /translation="MARVPLIQEQEHPELAQVIEQFRAGRRGKLINIYRMLLNAPPLA
                     ESWFNHSNTVRWKTTLPGRLREIVIIRMGHLTGSQYVLRQHVPSLALADGLSLAECDA
                     LADWRGREFFSASERAVLAYADTMTRDVVVPDAVFAEVARHFNAREIVELTVLIGTYN
                     MNARVLQALELDLEPLAP"
     gene            1060..2169
                     /locus_tag="VIQ50_13695"
     CDS             1060..2169
                     /locus_tag="VIQ50_13695"
                     /inference="COORDINATES: protein motif:HMM:NF014841.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9361483.1"
                     /translation="MSSFGVVCVPAEGPLVVEDDRFLRVVGIVLDPDTSRERTAAYAD
                     FFAHDEPDFTGYCQRVRARVGELFPRKVRLVETQDELRAALPGSCALVVESLRVGRDE
                     LVAGGALRIVHKFGFKPRNIDTDACADRGIKVLTIRRRANIACAELAVALMLTLAKKL
                     HRLAGRVSVDDLSAIGYAYKPFDRRHTPNSNWARISGLHTLNGATLGIIGLGEIGREI
                     AIRAAAFGMRILYYQRTRLPAGEEQELLATHVPLETLLAQSDWVVPQLPGGPATRAFI
                     GRAQFAQMKPGAFLVNIARADMVDRPALIEALRSGRLGGFALDPLYEEPGRGDDELLG
                     FDNVVLSPHIAAQPRFNALDDLAELMEGLSRELAA"
     gene            2166..3143
                     /locus_tag="VIQ50_13700"
     CDS             2166..3143
                     /locus_tag="VIQ50_13700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone oxidoreductase"
                     /protein_id="HEY9361484.1"
                     /translation="MSKAFRFHELGGPEVLRLEDVEVGPPGPAEVRIRNLAVAVNYRD
                     VLMRRGVHAVKSLPSGIGLESAGVIDAVGRDVRGLSVGDRVAYAGMPEGSYAELRIVP
                     AARVIPLPVDIDERTAASMMIRGMTARCLLTETYKVQPGDTILIHAAAGGVGLIMCQW
                     AKHLGATVIGTVSTEAKVEIARAHGCDHPIVYTREDFAGRVRDITGGEGVPVVYDSVG
                     KATFEASLKCLRRRGVMASFGEASGDPDPMPPRRLGALGSIYLTHPSVSNYTVTRAEL
                     LAAAHDLFAMVGSGKIKIAITQTYPLRDAPRAHADIESRKTTGSIVLVA"
     gene            complement(3176..>3397)
                     /locus_tag="VIQ50_13705"
     CDS             complement(3176..>3397)
                     /locus_tag="VIQ50_13705"
                     /inference="COORDINATES: protein motif:HMM:NF044751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-polyprenyl-6-methoxyphenol hydroxylase"
                     /protein_id="HEY9361485.1"
                     /translation="LLHLGGTKADATGLQRAFAAIGAPLQILDVADTRPRDIYGYDLF
                     LLRPDMHVVWRGNEAPPEPAKLAALATGH"
BASE COUNT          571 a         1106 c         1110 g          610 t
ORIGIN      
        1 accaacctgg cgggcgagtt gttcaagcag ctgatcggtg cccccgatat cgttcacgtt
       61 ccttacaagg gcgcagcgcc cggcgttgct gatctcgcca gcggtcacat tccgatgatg
      121 acgccgaacg tgggcgcacc gctcatcgag tttcatcgcg cgggaaaggt gcgcatcctt
      181 gcggtcaacg cggcaaaacg catcaaggcg gcgcccgata ttccgaccgc ggtcgaagcg
      241 ggattgccgg gcatgatcgc cggcaatctc aacgggctgt ttgctcccgc cggcgtcgcc
      301 gaggcgacgc gccagaccat ggcggacgcg gatgttcagc gcatcctagt ggcctccggg
      361 tttgagccga tcacggactc aggacccgag gcgacacgcc agttcatcgc cgaagagctc
      421 gcgcgttgga cctcagtcat gaaggcaacc ggcctcaaga tggggtaatg atcgccggca
      481 ggtgcaaggc gagcactccc gagcagccga aggcaaaagg aataccatgg cgcgcgtgcc
      541 cctcatccaa gagcaagagc atcccgaact cgcgcaagtg atcgaacaat ttcgcgccgg
      601 gcgacgcggg aagctgatca acatttatcg catgctgctc aacgcgccgc cgctcgccga
      661 gagctggttc aatcactcca atacagtacg atggaagacg acgcttcctg gccgcctgcg
      721 ggagatcgtg atcatccgca tgggtcatct caccggctcg caatacgtct tgcgccagca
      781 cgtgccgtcg ctcgccctgg ccgacgggct ttcgctggcc gaatgcgatg cgcttgccga
      841 ctggcgcggg cgcgaattct tcagcgccag cgaacgcgcc gtgctcgctt acgccgatac
      901 catgacccgc gatgtcgtgg tgcccgacgc ggtcttcgcc gaggtcgcgc gccatttcaa
      961 tgccagggag atcgtggaat tgaccgtgct gatcggcacc tacaatatga acgcgcgcgt
     1021 gctgcaggcg cttgagctcg accttgaacc gctcgcgccg tgagttcctt tggagtagtc
     1081 tgcgtgccgg ccgagggtcc cctagtcgtc gaagacgatc gtttcctgcg cgtcgtcggc
     1141 atcgtgctcg accccgacac ctcccgcgag cgcaccgcgg cctatgccga tttctttgcc
     1201 cacgacgagc ccgattttac cggctactgc cagcgcgtgc gcgcccgcgt gggcgagctt
     1261 ttcccgcgca aggtgcggct cgtcgaaacg caggacgagc tgcgcgcggc tttgcccggc
     1321 agctgcgcgc tggtggtcga atcgctccgc gtcggcaggg acgaacttgt cgcggggggc
     1381 gcgttgcgca tcgtgcacaa attcggcttc aagccgcgca acatcgacac tgacgcctgc
     1441 gcggacagag gcatcaaggt gctgaccatc cgccgccgcg ccaacatcgc ctgcgccgaa
     1501 ttggccgtcg cgctgatgct gacgctcgcc aaaaagctgc atcggctggc cggacgcgtc
     1561 agcgtcgatg atttgtccgc gatcggctac gcctataagc cgttcgaccg ccggcacacg
     1621 ccgaactcga attgggcgcg gatttccggc ttgcacaccc tcaacggggc cacgctgggc
     1681 attatcggtc tgggcgagat cggccgcgag atcgctatcc gcgcagcagc gttcgggatg
     1741 cgaattctct attaccagcg cacccggctg ccggcggggg aagagcagga gcttcttgcg
     1801 acgcatgtgc cgctcgagac gctgctcgcg cagagcgatt gggtggtgcc gcaattgccg
     1861 ggcgggccgg cgacgcgcgc gttcatcggc cgcgcgcaat ttgcgcagat gaaaccgggc
     1921 gcgttcttgg tgaacatcgc gcgcgccgac atggtcgacc gcccggcatt gatcgaggcg
     1981 ctgagatcgg gccggctcgg cggctttgcg ctcgacccgc tctatgagga gcccggccgc
     2041 ggggacgacg agctcttggg ttttgacaac gtcgtgctct ctccccacat cgcggcgcag
     2101 ccgcgcttca acgcgctcga cgatctcgcc gaactgatgg aaggtctgtc gcgggagctc
     2161 gcggcgtgag caaggccttt cgtttccatg agcttggcgg ccctgaggtg ctgcgccttg
     2221 aggatgtcga ggtcggtcct cccggtcccg cagaggtgcg cattcgcaac ctcgcggtcg
     2281 cagtcaatta tcgcgacgtg ctgatgcgcc ggggcgtgca tgcagtgaaa tcgcttcctt
     2341 ccgggatcgg tctagagagt gccggcgtca tcgatgcggt ggggcgcgac gtgcgcggcc
     2401 tttcggtcgg cgaccgcgtc gcttatgccg gcatgccgga aggctcttac gccgaactgc
     2461 gcatcgtccc ggcggcgcgg gttatcccgt tgccggtcga tattgatgag cgcacggccg
     2521 cctcgatgat gatccgcggc atgacggcgc gctgcttgct caccgaaaca tacaaggtgc
     2581 agcccggcga tacgatcctg atccacgcag ccgccggcgg cgtcggcctc atcatgtgcc
     2641 aatgggcgaa gcacctcggc gcgacggtaa tcggcaccgt gagcaccgag gcgaaggtgg
     2701 agattgcccg cgcgcacggt tgcgatcatc cgatcgtcta cacgcgcgaa gattttgccg
     2761 ggcgcgtgcg cgacatcacc ggcggggaag gcgttcccgt cgtctacgat tcggtcggca
     2821 aggcgacgtt cgaagcatcg ctgaaatgcc tgcgtcggcg cggggtgatg gcttccttcg
     2881 gcgaagcctc gggcgatccc gaccccatgc cgccgcgccg gctcggcgca ctcggctcga
     2941 tctatctcac gcatccgagc gtctcgaatt acacggtcac tcgcgccgag cttctcgccg
     3001 ccgcgcacga cctgtttgca atggtcggca gcggcaagat caagattgcg atcacccaga
     3061 cttatccact gcgagacgcg ccgcgcgccc acgccgatat cgaatcgcgc aagaccactg
     3121 gttcgatcgt gttggtggcg tgaggcgtga ggagcaggtc ggctgggtgt tgtgttcaat
     3181 ggcccgtcgc aagcgccgcc aattttgccg gttcgggcgg agcctcattg cctcgccaga
     3241 ccacgtgcat gtccggccgc aggaggaaga gatcatagcc gtagatgtcg cgcggccttg
     3301 tgtcggcaac gtcgagaatc tgcaacggcg cgccaatcgc ggcgaacgcc cgttgcaggc
     3361 cagtcgcgtc ggccttcgtc ccgcccaggt gcagcag
//
LOCUS       DATCWM010000694         3541 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_372454, whole genome shotgun sequence.
ACCESSION   DATCWM010000694 DATCWM010000000
VERSION     DATCWM010000694.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3541
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_372454"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..520
                     /locus_tag="VIQ50_13710"
     CDS             <1..520
                     /locus_tag="VIQ50_13710"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9361486.1"
                     /translation="KKPVIGGGTSYDEFVLPSMGDEVIGHVSALQYSAALETPKNEAF
                     VKKYRAKFGKMPGYYSETNYTSAQMIHEVIKNNQGNFPGAEEFVKQLAALKSDTIRGP
                     VSIDDMRNPVQNIYIKKVEKKKMFGYDKEELWNTVIKTYPNVSQFGQFNKEEFLKTPV
                     YSRDFPPCKYCN"
     gene            588..1346
                     /locus_tag="VIQ50_13715"
     CDS             588..1346
                     /locus_tag="VIQ50_13715"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9361487.1"
                     /translation="MNANGGCPALELRGLSKSFGGLAAVRGVTLTVMPGQRKAIIGPN
                     GAGKTTLFNLITGILPSSSGQVMLFGRDVTKWPSHRRTALGMARTFQVTSLFPRLTVL
                     DNVLLAIEGLRPSKFVMWRFLSSYRDVYEKAHGLLERAGFLDRKDAEVRYLSHGEQRQ
                     LEIVLGLASDPKILLLDEPAAGLSSGESSEMIRFLAQLDRSLAILLIEHDMDVVFDVA
                     EHISVLHFGEVLEAGPAEQIRRSEKVQQIYLGTG"
     gene            1351..2052
                     /locus_tag="VIQ50_13720"
     CDS             1351..2052
                     /locus_tag="VIQ50_13720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008546744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9361488.1"
                     /translation="MAILEVQDIHTYYGDAYVLQGLSLRLEEGQSLGLLGRNGVGKTT
                     LVNSIVGFNRPRRGKIVFKGVDITAASSFETVRSGMGLVPQGRRVFPTLSVEENLMVA
                     ERSVDRRGWNMERVYALFPRLRERRSQRARTLSGGEQQMLAIGRGLMTNPDCLIMDEP
                     SEGLAPIIIQGLWKAIAQLKEQGHSILLVEQNAALALELVDYVHVMSKGQVVYSSRPQ
                     ELRANDEIKSRYLGI"
     gene            2219..3466
                     /locus_tag="VIQ50_13725"
     CDS             2219..3466
                     /locus_tag="VIQ50_13725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007755913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9361489.1"
                     /translation="MNVNRRAVIKGTLAAGVATQVLKVPAAPAQAAPLRVGFLTIKTG
                     PLASGGLQMEQGLTVFFKERNNTLAGRPVELHTADTAGNPAQARTKTQELVERLNVAA
                     LIGPLAAFEALAIDDYVRSSRTPILSVAGAEDMTQRKPNPWFVRPSCTSAQPSHPLGE
                     YAAKELKCKRVAVIADDFAFGHENVAGFQRVFEDNGGKVVQKLWTPLNAPDYGTYISQ
                     LKGDLDAVYTGHAGSNGFKFIRQLREYGNKVQILGGFTPVDESLLQQMGDDALGAITG
                     CWYSAELDFPINKRFVEAIRRDYKTDPGVYAAETYVCGEVLDHALKAIGGKAEDKDTF
                     MKALREANVPNTLRGPLRFDEFGNAIGNIYMRKVEKKDGRYVNAVVKTYPDVSQFWTY
                     KQDEFLKNPVYSRDYPPAKNLEQ"
BASE COUNT          707 a         1134 c         1111 g          589 t
ORIGIN      
        1 caagaagccg gtgatcggag gcgggacgag ctatgacgag ttcgtgctgc cgtccatggg
       61 cgacgaggtg atcggtcacg tctccgcgct gcaatacagc gcggcgctgg aaacgccgaa
      121 gaacgaggcg ttcgtgaaaa aatatcgcgc caaattcggc aagatgcccg ggtattattc
      181 agagaccaac tacacgtcgg cgcagatgat ccacgaggtc atcaagaaca accagggcaa
      241 cttccccggc gccgaggagt tcgtcaaaca gctcgccgcg ctgaaatcgg ataccatccg
      301 cggtccggtc agcatcgacg acatgcgcaa tcccgtgcag aacatctaca tcaagaaggt
      361 cgagaagaag aagatgttcg gctacgacaa ggaggagctc tggaacacgg tcatcaagac
      421 ctatccgaac gtcagccagt tcgggcagtt caacaaagag gagttcttga agacgccggt
      481 ctacagccgc gacttcccac cctgcaaata ctgcaattag cgcttgccgg ccggggcccg
      541 cccgcggcgt cccggccgct tcacatgcga tgggcgaggg gagcgaggtg aacgcgaacg
      601 gcggctgccc cgctctcgag ttgcggggcc tctccaaaag cttcggcggg cttgctgccg
      661 tgcgcggggt cacgctcacg gtcatgcccg gccagcgcaa ggccatcatc gggccgaacg
      721 gcgccggcaa gacgacgcta ttcaatttga ttaccggaat cctgccctcc agctccggcc
      781 aagtcatgct gttcggccgg gacgtcacaa agtggccgag ccatcgccgc acggcactgg
      841 gaatggcgcg cactttccag gtcaccagcc tgttcccgag gctcacggtt ctcgacaacg
      901 tgctgctggc gatcgagggg ctgcggccgt cgaaattcgt gatgtggcgg tttttgtcct
      961 cctatcgcga cgtctacgag aaagcgcacg ggctcttgga acgcgccgga ttcctcgacc
     1021 gcaaggacgc cgaagtgcgg tatctctcgc acggcgagca gcggcagctc gagatcgtgc
     1081 tcggtctcgc cagcgatccc aagatcctgc tgctggatga accggccgcc ggcctctcct
     1141 cgggcgaatc ctcggagatg atccggtttc tcgcccagct cgatcgcagc ctcgccatcc
     1201 tgctcatcga gcacgacatg gacgtggtgt tcgacgtggc cgagcacatt tccgtgctgc
     1261 atttcggcga ggtgctggaa gcggggccgg cagagcaaat ccgccgcagc gagaaagttc
     1321 agcaaatcta tctcgggacc ggctgacccc atggccatcc tggaagttca ggacatccac
     1381 acctattacg gggacgccta cgtcctgcag gggctgtcgt tgcggctcga ggaaggacag
     1441 agcctgggct tgctcgggcg caacggggtg ggcaagacga ccttggtgaa ctcaatcgtc
     1501 ggcttcaatc gtccgcgccg gggcaagatc gtcttcaagg gcgtggacat caccgcggcg
     1561 tcttcgttcg agacggtgcg cagcggcatg gggctcgtgc cccagggccg gcgcgtgttc
     1621 cccacgctca gcgtcgagga aaatctcatg gtcgccgagc gcagcgtcga ccggcgcggc
     1681 tggaacatgg aacgcgtcta cgcgctgttt ccccgcttgc gcgaacggcg cagccagcgc
     1741 gccaggacgc tctccggcgg cgagcagcag atgctggcca ttgggcgcgg tcttatgacc
     1801 aacccggact gcttgatcat ggacgagcct tccgaggggc tcgcgcccat catcatccag
     1861 gggctatgga aggcgatcgc gcaactgaag gagcagggcc attccattct gctcgtcgag
     1921 caaaacgccg cgctggcgct cgagctggtc gattacgtgc acgtcatgag caaggggcag
     1981 gtcgtctact cctcccgccc gcaggagctg cgggcaaacg acgagatcaa atctcgctac
     2041 ctcggcatct gatcgcgctt gcgatcctta cagggaatta atcgcgagag ggcgcggagg
     2101 cggcgcgaac cgcgggacag gattggtggc gatattgtaa aagccaggct cggccttaag
     2161 gacctgcgac cggattgagc gagcgggtcc gtgaacaata gccagaggga gaaacgccat
     2221 gaacgtcaat cgccgtgccg tgatcaaggg aacgctcgcc gccggcgtcg cgacgcaggt
     2281 gctcaaagtg cccgccgcac cggcgcaggc ggcgccgctg cgcgtcggat tcctaaccat
     2341 caagactggg ccgctcgcct cgggcgggct gcagatggag caaggcctca ccgtcttctt
     2401 caaggaacgc aacaacacgc tcgcgggccg gccggtcgag cttcacaccg ccgacaccgc
     2461 cggcaatccg gcgcaggccc gcaccaagac gcaggagctg gtcgaacgcc tcaacgtcgc
     2521 ggcgctgatc ggcccgctcg ccgcgttcga agccttggcg atcgacgact acgtccgctc
     2581 ctcgcgcacg ccgatcctct ccgtcgccgg cgccgaggac atgacccagc gcaagcccaa
     2641 cccttggttc gtgcggccga gctgcacctc ggcgcagccg agccatccgc tcggcgagta
     2701 cgccgccaag gagctcaagt gcaaacgcgt cgcggtgatc gccgacgatt tcgctttcgg
     2761 ccacgaaaac gtcgccggct ttcagcgcgt gttcgaagac aatggcggca aggtcgtgca
     2821 gaagctctgg accccgctca acgcgccgga ctacggcacc tacatctcgc agctcaaggg
     2881 cgatctcgac gcggtctata ccgggcacgc cggctccaac ggcttcaagt tcatccgcca
     2941 attgcgcgag tacggcaaca aggtgcagat cctgggcggc ttcacgccgg tcgacgaatc
     3001 gctgctgcag cagatgggcg atgatgcgct cggggccatc accggctgct ggtattcggc
     3061 cgagctcgat tttcccatca acaaaaggtt cgtcgaagcc atccgccgcg actacaagac
     3121 cgatcccggc gtctacgccg cggagaccta tgtctgcggc gaggtcctcg accacgccct
     3181 caaggcgatc ggcggcaagg ccgaggacaa ggacacgttc atgaaggcgc ttagggaggc
     3241 gaatgttccg aacaccttgc gcggccctct gcggttcgac gagttcggca atgcgatcgg
     3301 caacatctac atgcgcaagg tggagaagaa ggacggccgt tacgtcaatg cggtggtcaa
     3361 gacctatccc gacgtcagcc agttctggac ctacaagcag gacgagtttc tcaagaaccc
     3421 ggtctattcg cgcgactacc cgccggcgaa gaatctcgag cagtagccga aaatcctcgt
     3481 gtagctaaac tatctcgccg cgggcgcggt gtgctccctc tcccacccga actcggcttg
     3541 c
//
LOCUS       DATCWM010000695         2180 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_318219, whole genome shotgun sequence.
ACCESSION   DATCWM010000695 DATCWM010000000
VERSION     DATCWM010000695.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2180)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2180)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2180
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_318219"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1110
                     /locus_tag="VIQ50_13730"
     CDS             <1..1110
                     /locus_tag="VIQ50_13730"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase family protein"
                     /protein_id="HEY9361490.1"
                     /translation="QRHGRQRDMGLGSARSVSLALARELRDDCHVKLARGLDPIQARN
                     SAVLAARAEHAKQMTFRQCAEDYLTVNASKWRNAKHRKQWVATLTRYAYPVFGNLSVA
                     AIDSGLVFKALKPLVAEKPVTASRVRGRIETVLDFAHAAGRRDGDNPADKAVIGHLLP
                     LRSEKAGVRHQPALPFAKLPVFMTELRKMRGLPARLLELIILTGMRLDAVRPARCAEF
                     DLGAAVPVWVIPQSRMKNLGRDQRVPLVGRALAIARELTARRDPEAPVFGNDKPISPN
                     AIRKSVLPKLLKAIGHEAPTVTHGFRSCLKDWCHETTSIPHEVVEQALGHRIKSTVER
                     SYRRGDLFERRRALMAAWDRYCDGEEVAEVIELRA"
     gene            1116..1850
                     /locus_tag="VIQ50_13735"
     CDS             1116..1850
                     /locus_tag="VIQ50_13735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361491.1"
                     /translation="MAAGRSARPLYQVFLELVIRIDAVQRHRPKATDEYASGFFDAGR
                     LLGELEDYRWALDEPELLSRRGVYFLGVIDARGFTPFKEKEISPAMQTAWDAAVAAWK
                     EFVGALGNGEYIATATHPATGKRHELDPAEWLRTGLVLDVRNGDLIEGSYDRPGDERT
                     VRWSAIVVEAAIQQRKLGAIDWDAEWSEDVARRQQGRLPNKKAYTRELEARIKERYGV
                     TSVDGGDLRRFKAALYRDDLVRPRKK"
     gene            1982..>2180
                     /locus_tag="VIQ50_13740"
     CDS             1982..>2180
                     /locus_tag="VIQ50_13740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family phage regulatory protein"
                     /protein_id="HEY9361492.1"
                     /translation="MRAELLTVVPHSMATIDRLEAIGQFPKRIRLEPTNRVAWLRREV
                     TRYLRHLAARRQSAAQQDHVNA"
BASE COUNT          410 a          672 c          742 g          356 t
ORIGIN      
        1 cagcgtcatg gccgccagcg cgacatgggc ctgggcagcg ctcgctcggt ctcgctcgcg
       61 ttagcgcgag agctgaggga cgattgccac gtgaagctcg cccgcggcct cgacccgatc
      121 caggcccgca acagcgccgt gcttgccgcc cgggccgagc acgccaagca gatgacgttc
      181 cggcaatgcg ccgaggacta tctcaccgtc aacgcgagca agtggcgcaa cgccaagcac
      241 cgcaagcaat gggtggccac gctcacccgc tatgcgtatc cagtattcgg caacctttcc
      301 gttgcggcga tcgacagcgg gctggtgttc aaggccctca aaccactggt cgccgagaag
      361 ccggtgacgg cgagccgcgt ccgagggcgc atcgagacag tcctcgactt cgcccatgcg
      421 gccggccgcc gcgacggcga caaccccgcc gacaaggcgg tcatcggcca tctgctaccg
      481 ctgcgctcgg agaaggctgg cgtgaggcat cagccggcgc tccccttcgc gaagctaccg
      541 gtgttcatga cggaactgcg caaaatgcga ggactgccgg cgcggttgct ggagttaatc
      601 attctcaccg gcatgcgcct ggatgcagtg cggccggcac gctgtgccga gttcgatctg
      661 ggtgcggcgg tgccggtgtg ggtgatcccg caatcccgca tgaagaacct ggggcgcgat
      721 cagcgcgtgc cgctcgtggg ccgcgcgctc gccattgcgc gggagctgac cgcgcgccgt
      781 gatcccgagg ccccggtatt cggcaatgac aaaccgatca gtcccaatgc catccgcaaa
      841 agcgtactcc ccaagctgct taaggctatc ggccacgaag ccccgacagt gacgcacggt
      901 tttcgctcgt gcctcaaaga ttggtgccac gagacaacga gcattccgca tgaggtggtc
      961 gagcaggcgc tcgggcatcg cattaagagc acggtcgagc gcagctaccg gcgcggcgat
     1021 ttgttcgagc gtcggcgcgc gctgatggcg gcctgggacc gttactgcga cggggaagag
     1081 gtcgccgagg tgatcgagct gcgggcgtga attccgtggc agccgggaga tcagcgcggc
     1141 cgctctacca ggtatttctt gagctggtca tcaggatcga cgcggtgcag cgccatcggc
     1201 ccaaggccac cgacgagtac gcctcggggt tcttcgacgc gggccggctg ctcggtgagt
     1261 tggaggacta ccggtgggcg ctcgatgagc cggagctgct ctcacgacga ggggtgtact
     1321 ttctgggcgt gattgacgcg cgaggcttca cccctttcaa agaaaaagaa atttcaccgg
     1381 ccatgcaaac ggcgtgggat gcggcggttg cggcttggaa ggagttcgtg ggtgcgctcg
     1441 ggaacggcga gtatatcgcc accgcgacgc atccggcgac cggcaagcgc catgagctcg
     1501 atcctgcgga gtggttgcgc accggcctgg tcctcgacgt gcgcaacggc gacctgattg
     1561 aaggatcgta cgacaggcca ggggatgagc gtaccgtgcg ctggtcggcc atcgtggtgg
     1621 aggcggccat tcaacaacgc aaactgggag caatcgactg ggacgcggag tggagcgagg
     1681 acgtggcccg ccggcaacag ggtcggctcc cgaacaagaa agcctacacg cgcgagttag
     1741 aagcgcggat taaggaacgc tacggcgtga cgagcgtgga tgggggcgat ctgcggcgct
     1801 tcaaagccgc cttgtatcga gatgacctcg tgcggccgcg caagaagtaa gcccaataag
     1861 tctgtgggaa catccccgca aaatcccaca aagcgccaca agacggcgtg gggcggaatg
     1921 ggcatcgtgg ggcatgccaa agcccttgcc gcgcgttcct cacgttgagt ccccattcgt
     1981 tttgcgtgcc gagctgctga ccgtggtgcc gcactccatg gcgaccatcg atcggctgga
     2041 ggctatcggc cagtttccca agcgaatccg gctggagccg acaaatcgcg tggcgtggtt
     2101 gcgacgtgaa gtgacgagat atctgcgcca tctcgctgcc cgcaggcagt cagcggcgca
     2161 gcaagatcac gtcaatgcgg
//
LOCUS       DATCWM010000696         3234 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_345433, whole genome shotgun sequence.
ACCESSION   DATCWM010000696 DATCWM010000000
VERSION     DATCWM010000696.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3234
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_345433"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..807
                     /locus_tag="VIQ50_13745"
     CDS             <1..807
                     /locus_tag="VIQ50_13745"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY9361493.1"
                     /translation="LGKPFVIENRPGGGGVIGALSVARAAPDGHTILMAPSSVIAINV
                     ALHRKLPYDPVADFVPLALVAATPFVLVVSPSLPAKSVTDLIALAKASPGRLAFASAG
                     LGTPHHLFAELFKSSTGIELTHVPYRGSVPALTDIAAGHVQLMFCDVPPALGLVNEGK
                     VRALGVSTKERVPALSQLSPIAEAGVSGFDAASWQMVVAPAATPKEIVERLHAEIKDV
                     MLQADIRDHAAKMGVLPIDTPSVASLRIFVQTEIDRWSKVVEQAGIAGSQ"
     gene            866..1591
                     /locus_tag="VIQ50_13750"
     CDS             866..1591
                     /locus_tag="VIQ50_13750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018185126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9361494.1"
                     /translation="MGLPLLSVRGVKAYYGHIAALRGVDVDVGEGEIVALIGANGAGK
                     STLMMTIFGNPRAREGRITFAGRDITQLPTHEIARLKIAQAPEGRRIFVRMTVLENLQ
                     MGAVVADGAQFQSDVERVFALFPRLKERLDQRGGTLSGGEQQMLAIGRALMGQPRLLL
                     LDEPSLGLAPLIARQIFDAIRKLNSEEKLTVFLVEQNAFHALKLAHRGYVMVNGRITL
                     SGTGRELLARPEVKAAYLEGGRH"
     gene            1606..1986
                     /locus_tag="VIQ50_13755"
     CDS             1606..1986
                     /locus_tag="VIQ50_13755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361495.1"
                     /translation="MPELLSDEHSLAVFLLVSVAMGGGAAWLAGRAIASTWRPWWHLA
                     LYMLPLSAAVRFLHYALFEGKFLSLHYYLVDYAVCLAFGSLGFHLTRATQMVTRYKWI
                     HERAGPFRWRRRDDTPAADTPKSE"
     gene            2074..3192
                     /locus_tag="VIQ50_13760"
     CDS             2074..3192
                     /locus_tag="VIQ50_13760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HEY9361496.1"
                     /translation="MRQWLTLGLALGLGLALADNASAQVKLGVAGPITGGSAAFGAQL
                     KNGVEQAVEDINAAGGILGQKIQLFVGDDRADPKEGVSVANKFVGDGVKFVVGHFNSG
                     VTMPASEVYQENGILEITPAATNPKVTERNMWNIFRTCGRDDQQGAVAGDYIAKNFKG
                     KKVAIVHDKTTYGQGLAEETRKNLNSKGLKEVMFEGVNKDDKDFSALVSKVKASNADL
                     IYWGGLHDTGGLILRQLRAQGVKAPFMGADGIADEEFAAIAGPGAEGTLMTFGPDARK
                     RPEAKDIVAKFRAKNFEPQAYTLYSYAAVQVIKQAAEAAKSLDPKKVAAQIKSGQKFN
                     TVIGQLTYDKKGDVTRIDYTVYVWKKDPSGKVTYTEIE"
BASE COUNT          581 a         1060 c         1037 g          556 t
ORIGIN      
        1 ctgggcaagc cattcgtgat cgagaaccgg ccgggcggcg gcggagtgat cggtgcgctt
       61 tccgtcgccc gcgcggcgcc cgacggccac accatcctca tggcgccatc ctcggtcatc
      121 gcgatcaacg tggccctgca caggaagctc ccctacgatc cggtcgccga cttcgtgccg
      181 ctcgccctcg tcgccgcaac acctttcgtg ctggtggtgt cgccctcgct gccggcgaag
      241 tcggtcacgg acctcatcgc actggccaag gcgagccccg gccggctcgc ctttgcgtcg
      301 gccgggctgg gcaccccgca tcatcttttt gccgagctgt tcaagagctc gacgggaatc
      361 gagctgacgc atgtgcctta ccgcggctcg gtgccggcgc tgaccgacat cgccgccggc
      421 cacgtccagc tcatgttctg cgatgttccg ccggcgctcg gcttggtcaa cgaaggcaag
      481 gtgcgggcgc tcggcgtctc caccaaggag cgggtccccg cgctgtccca gctttccccc
      541 attgccgaag cgggggtgag cggattcgac gcggcgtcct ggcagatggt ggtggccccg
      601 gcggctacgc cgaaggagat cgtcgagcgg ctgcacgccg agatcaagga cgtgatgctg
      661 caggcggata tccgcgatca cgccgcgaag atgggcgtgc tgccgatcga caccccctcg
      721 gtcgccagcc tgcgcatctt cgttcagacg gagatcgatc gctggagcaa agtcgtggaa
      781 caggccggca tcgcaggctc gcaatgacgc gcacggcacg ccgctttttc cgccggcgct
      841 gccgcgagga cgcgtgaagg cgcaaatggg cttgccgctt ctcagcgtgc gcggggtcaa
      901 ggcctattac ggccacatcg ccgcgctcag gggcgtcgac gtcgatgtcg gcgaaggcga
      961 gatcgtggcg ctcatcggcg cgaacggggc cggcaagtcg acgctaatga tgacgatctt
     1021 cggcaacccg cgcgcccgcg agggccgcat caccttcgcc ggccgcgata tcactcaatt
     1081 gcccacgcac gagatcgcgc ggctcaagat cgcgcaggcg ccggaaggcc gccgcatctt
     1141 cgtgcgcatg acggtgctgg agaacctgca gatgggcgcc gtcgttgcag atggggcgca
     1201 atttcagtcc gatgtggaac gcgtgttcgc gctgtttccc cggctgaagg aacgcctcga
     1261 ccagcgcggc ggcacgctct cgggcggcga gcagcagatg ttggcgatcg gccgcgcgct
     1321 catgggccag ccgcggcttc tgctcctcga cgaaccttcg ctcggcttgg cgccgctcat
     1381 cgcgcggcag attttcgacg cgatcaggaa attgaacagc gaggaaaagc tcaccgtatt
     1441 cctggtggag cagaacgctt tccacgccct gaaactcgcg catcgcggct atgtcatggt
     1501 caacggccgc atcacgctca gcggcaccgg gcgggagctt ctggcgcgcc cggaggtcaa
     1561 ggcggcctat ctcgagggcg gcagacactg agcatgcaca tctcgatccc cgaactcctg
     1621 tccgacgagc actcgcttgc cgtgtttctc ctggtgagcg tcgccatggg cggcggcgcc
     1681 gcttggctcg ccggccgtgc gatcgcctcg acctggcggc cgtggtggca tctcgcgctc
     1741 tacatgttgc cgttgagcgc tgcggtgcgt ttcctccact acgccttgtt cgagggcaag
     1801 ttcttgtcgc tgcattacta tctcgtcgat tacgcggtct gcctcgcctt cggctcgctc
     1861 ggctttcacc tcacgcgcgc cacccagatg gtcacccgct acaaatggat ccatgaacgc
     1921 gcggggccat ttcgctggcg gcgccgcgac gatacgccgg ccgcggatac gccaaaatcc
     1981 gagtgacatt tccgcgattt gcggattgaa tcgcgtcacg gggcgcgcga gacgaaacgc
     2041 gccaatctgc gttttcatcc agaggtggac actatgagac aatggctcac gctcggcctc
     2101 gccctcggtc ttggccttgc tcttgcggat aatgcttcgg cgcaagtcaa gttgggcgtc
     2161 gccggaccga tcaccggcgg cagcgccgcc ttcggcgcgc agctcaagaa cggggtggag
     2221 caagcggtcg aggacatcaa cgccgccggc ggcattcttg gacagaagat tcagcttttc
     2281 gtcggcgacg atcgcgccga tccgaaggaa ggcgtctcgg tcgccaataa gttcgtcggc
     2341 gacggcgtca aattcgtcgt cgggcacttc aattcgggcg tcaccatgcc ggcctccgaa
     2401 gtctaccagg agaacggcat cctcgagatc acgcccgcgg ctaccaatcc caaggtcacc
     2461 gagcgcaaca tgtggaacat ctttcgcacc tgtgggcgcg acgatcagca gggcgcggtg
     2521 gccggcgatt acattgccaa gaatttcaag ggcaagaagg tcgccatcgt gcacgacaag
     2581 acgacctacg ggcagggcct cgccgaggag acgcgcaaga acctcaattc caagggcctc
     2641 aaggaagtga tgttcgaagg cgtcaacaag gacgacaagg acttttccgc gctggtgtcc
     2701 aaggtcaagg cgtcgaacgc cgacctcatc tattggggcg ggctgcacga caccggcggc
     2761 ttgatcctgc ggcagttgcg tgcccagggc gtcaaggcac cgttcatggg agccgacggc
     2821 atcgccgacg aggagttcgc ggcaattgcc ggtcccggcg ccgaaggcac gctgatgact
     2881 ttcggccccg atgcgcgaaa gcggccggaa gcgaaggaca tcgtcgcgaa attccgcgcc
     2941 aagaatttcg agccgcaggc ctacacgctc tacagctacg ccgcagtgca ggtcatcaag
     3001 caggccgccg aggcggcgaa atccctcgac cccaagaagg tcgccgcgca gatcaagtcc
     3061 ggccagaagt tcaacaccgt gatcggacaa ttgacctacg acaagaaggg cgacgtgacc
     3121 cggatcgact acacggtcta cgtctggaag aaggacccca gcggcaaggt cacctacacc
     3181 gagatcgagt gacgctggtt ccagcttgat gtgtcaaagc ccgcctcgga ccga
//
LOCUS       DATCWM010000697         3446 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_350745, whole genome shotgun sequence.
ACCESSION   DATCWM010000697 DATCWM010000000
VERSION     DATCWM010000697.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3446)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3446)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3446
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_350745"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..439
                     /locus_tag="VIQ50_13765"
     CDS             <1..439
                     /locus_tag="VIQ50_13765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009466893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEY9361497.1"
                     /translation="HPLPPQNLVYKLLGRHVETEISYKLPGLRIEEVHGDRHAVIGLT
                     AITPITDEATEVHQIFWASAGWVAPLAPLLKPFMHTFLDQDRQVVVKQREGLVHKPRL
                     MLINDADTQARWWMRVKDEWIAAQGEGRPFVNPLEPKTLRWRS"
     gene            448..1530
                     /gene="pheS"
                     /locus_tag="VIQ50_13770"
     CDS             448..1530
                     /gene="pheS"
                     /locus_tag="VIQ50_13770"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HEY9361498.1"
                     /translation="MTDLRALETELLAAVAHAADEPALEAVRVAALGRNGSISALLKT
                     LGTMSPEARKEQGPRINGLKDRVTDAIAARRDALKELALDQRLNTETLDVTLPVREPP
                     AEVGRVHPISQVVDELTSIFADMGFAVAEGPDIETDDYNFTKLNFAEGHPARDMHDTF
                     YFNPKPDGSRLLLRTHTSPVQIRTMLAQKPPIRVIIPGRTYRSDSDQTHTPMFHQVEG
                     LVIDKGSHLGHLKWILQEFCKAFFEVDQVKMRFRPSFFPFTEPSLEVDIQCRREKGEI
                     RFGEGDDWMEILGCGMVHPNVLRNCGLDPDEYQGFAWGLGIDRVAMLKYGMPDLRPFF
                     EADVRWLSHYGFRPLDFPTLAGGLSG"
     gene            1661..>3446
                     /gene="pheT"
                     /locus_tag="VIQ50_13775"
     CDS             1661..>3446
                     /gene="pheT"
                     /locus_tag="VIQ50_13775"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HEY9361499.1"
                     /translation="MKLTLAWLKEHLDTEAPLAAIVEKLTMIGLEVESVADRGKMLAP
                     FIITRVISAEQHPNADRLRVCMVDTGAGDPVQVVCGAPNARAGMKGVFVPPGAFIPGK
                     NMTLGIGKIRGVESRGMLVSEFELQISEDHEGIIDLPQDAPVGANYAHWAGLDDPVIE
                     INLTPNRADCAGVSGIARDLAAAEMGKLRDGSVRPVKGDFPPPVKVTLDFGTAPSLCP
                     AFALRLVRGVRNGPSPAWLQRRLIAIGLRPINALVDITNFITYDRGRPLHVFDAAKVQ
                     GDLTVRRARDGESLVALDGKDYSLDPSMCVIADESGVESLAGIMGGESTGCSETTTDV
                     LIESALWDPVNIAQTGRKLGVQSDARYRFERGVDPAFMLPGLELATAMVLDLCGGKPS
                     EVTVAGTPEVPARIIDFPLDELPRLTGLHVDRHEIERVLGRLGFAITDTGRHLKVTVP
                     SWRADVEGKADLVEEIVRIVGVDRIPATPFERGDAPRKPVLTPIQLRTRKAKRALAAR
                     GMLEAVTWSFLAKRQAELFGGGNPELALANPIASDLSDMRPSLIPGLAAAAQNNADRG
                     FANVALFEVGQVFRGDRPQDQLTTASGVR"
BASE COUNT          644 a         1106 c         1080 g          616 t
ORIGIN      
        1 tcatccactt ccaccgcaga atctggttta caagctgctc gggcgccacg tggaaaccga
       61 gatttcctat aagctcccgg ggctgcgcat cgaggaggtg catggcgatc gccatgccgt
      121 catcggactt accgcgatca ccccgatcac cgacgaggcg accgaagtcc atcagatatt
      181 ctgggcatcc gccggctggg tggcgccgct cgcaccgctg ctcaagccgt tcatgcacac
      241 attcctcgat caggatcgcc aagtggtggt caagcaacgc gagggccttg tgcacaagcc
      301 ccggctgatg ctcatcaacg acgccgatac gcaagcacgc tggtggatgc gcgtcaaaga
      361 tgagtggatc gcggcgcagg gagaaggccg ccccttcgtt aatccgctcg agcccaagac
      421 gctgcgctgg cgaagttgag gagaccgatg accgacctgc gcgcactcga gaccgaactc
      481 ctggccgccg tcgcacacgc ggcggatgag ccggcgctcg aagccgtgcg ggttgcggcg
      541 ctgggccgca acggctcgat atccgcactc ctgaagacgc tcggcacgat gtcgcccgaa
      601 gcgcgcaagg agcaagggcc gcgtatcaac ggtcttaaag atcgggtcac cgatgcgatt
      661 gccgcacgta gagacgccct gaaagagctg gcgctcgatc agcgcctcaa caccgagacg
      721 ctggacgtga cattgccggt gcgcgagccg ccggcggagg tcggacgcgt ccatcccatc
      781 agccaagtgg tggacgagct gacctcgatt ttcgccgaca tgggttttgc cgtcgctgaa
      841 ggacccgaca tcgagaccga tgactacaat ttcaccaagc tcaatttcgc cgagggtcat
      901 cccgcccgtg acatgcacga taccttctac ttcaatccga agcccgacgg ctcacgactt
      961 ctactgcgta cccacacgtc gcccgtgcag atcaggacaa tgctggcgca gaaaccgccc
     1021 atccgcgtca tcattcccgg gcgtacctac cgcagcgaca gcgatcagac ccacacgccc
     1081 atgttccatc aggtcgaagg gctcgtcatc gacaagggct cgcatctcgg tcatctgaaa
     1141 tggatactcc aagaattctg caaggcgttc ttcgaggtcg atcaggtcaa gatgcgtttt
     1201 cgtccgtcgt tctttccgtt caccgagcca tcgctggagg tggatatcca atgccgacgc
     1261 gagaagggtg agatcagatt cggcgaaggc gacgactgga tggagattct cggctgcggc
     1321 atggtgcatc cgaacgtgct acgcaattgc gggctcgatc ccgacgaata tcagggcttc
     1381 gcctggggtc tcggaatcga ccgcgtcgcc atgctcaagt atgggatgcc ggatctgcgc
     1441 ccgttcttcg aggccgacgt gcgctggctc tcccactatg gcttccgtcc gctcgacttt
     1501 cctacgctgg cgggaggatt gagcggttga tcgcccgcgg caaacgcttg ctgcgagcca
     1561 atcgctggat cattcccgtt cgacagacag atgacaattt ctaattgtta agcctctccc
     1621 gcgagacggt ggaggaaaaa ggtcccggct cagcactatg atgaaattga cgctcgcttg
     1681 gctgaaggag cacctcgaca ccgaggcgcc gctcgctgcg attgtcgaga agctcaccat
     1741 gatcgggctc gaagtggaga gcgtcgccga ccgaggcaaa atgctggcgc ctttcatcat
     1801 cactcgggtg atctcggccg aacagcatcc gaacgcggat cgcctgcgcg tgtgcatggt
     1861 ggataccggc gcgggcgatc cggtccaggt ggtgtgcggc gcgcccaatg cgcgcgccgg
     1921 catgaaaggg gtattcgtgc cacccggagc cttcatcccg ggcaagaaca tgacgctggg
     1981 tatcggcaag atccgcgggg tcgaaagccg cggcatgctg gtgtccgaat tcgaattgca
     2041 aatctccgag gatcacgaag gcatcatcga tcttccgcag gatgcgccgg tcggagcgaa
     2101 ttacgcgcat tgggccgggc tcgacgatcc cgtcatcgag atcaatctca ctcccaaccg
     2161 cgccgactgc gccggcgtca gcggcatcgc gcgcgatctc gccgccgctg agatgggcaa
     2221 gctgcgggac ggaagcgttc ggccggtgaa gggggatttc ccgcccccgg tgaaggtgac
     2281 cctcgatttc ggcacggcgc cttcgctttg tccggcattt gccctgcgac tcgtgcgcgg
     2341 ggtgcgcaac gggccgtcgc cggcatggct gcagcggcgg ctgatcgcca tcggcctgcg
     2401 ccccatcaat gcgctggtcg acatcaccaa tttcatcact tacgaccgcg gacggccgct
     2461 gcatgtgttc gacgccgcaa aagtgcaggg cgatctcacg gtgcggcgcg cgcgcgacgg
     2521 cgagagtctc gtcgcgctcg acggcaagga ctattccctc gacccgagca tgtgcgtcat
     2581 cgcggacgag agtggcgtgg aatcgctggc aggcatcatg ggcggcgaga gcaccggctg
     2641 ttcggaaaca acgaccgacg tgctcatcga atccgcgctg tgggaccccg tgaatattgc
     2701 gcagaccggc cgcaagctcg gggtccaatc ggatgcgcgc taccgcttcg agcgtggcgt
     2761 cgatcccgcc ttcatgctgc cggggctcga actggcgacc gcgatggtgc tcgatttgtg
     2821 cggcggcaaa ccatccgaag tcacggtcgc aggtacgcca gaagtccctg cgcgcatcat
     2881 cgactttccg ctcgacgaac tgccgcggct caccggcctg cacgtcgatc ggcacgagat
     2941 cgagcgcgtg ctcggccggc ttggttttgc gatcaccgac acgggcagac atttaaaagt
     3001 caccgtcccg tcgtggcgcg ccgacgtcga gggcaaggcc gatctggtgg aggagatcgt
     3061 ccgcattgtc ggggtcgacc gcattcccgc gacgcctttc gagcgcggcg atgccccgcg
     3121 caagccggtg cttacgccca tccagctgcg cacgcgcaaa gccaagcgcg cgctcgccgc
     3181 gcgcggcatg ctcgaggcgg tgacctggtc gtttcttgca aagcggcagg ccgagttgtt
     3241 cggcggcgga aaccccgagc tcgcgctcgc caatcccatt gcctcggatc tatcggacat
     3301 gcgaccgagt ctcattccgg gcctcgctgc cgccgcgcag aacaatgccg accgcggttt
     3361 tgccaacgtg gcgctgttcg aggtcggaca ggtcttccgc ggtgatcgcc cgcaggatca
     3421 gctcacgacc gccagcggcg tgcgcc
//
LOCUS       DATCWM010000698         2750 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_264211, whole genome shotgun sequence.
ACCESSION   DATCWM010000698 DATCWM010000000
VERSION     DATCWM010000698.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2750
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_264211"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..559
                     /locus_tag="VIQ50_13780"
     CDS             <1..559
                     /locus_tag="VIQ50_13780"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012047506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="S16 family serine protease"
                     /protein_id="HEY9361500.1"
                     /translation="EAARMPGSGKLILTGQLGEVMKESAQAALTLAKARAAELGFDVA
                     LFEKSDIHIHVPAGAIPKDGPSAGVAMFVALASLLTGRTARNDTAMTGEISLRGLVLP
                     IGGVKEKVLAAARAGITTVLLPARNQKDLEDVPEAARQQVRFVWLERVDDAVAAALNP
                     PGTREEAESSVAGETSPARRAARSA"
     regulatory      604..732
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            764..979
                     /locus_tag="VIQ50_13785"
     CDS             764..979
                     /locus_tag="VIQ50_13785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020051492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CbtB-domain containing protein"
                     /protein_id="HEY9361501.1"
                     /translation="MTDTTLRSFAPALPTAIPVREVLPWAIFAGLLLLLALYFVGAEQ
                     GATSLISGMYMHEFLHDGRHLLGFPCH"
     gene            991..1731
                     /locus_tag="VIQ50_13790"
     CDS             991..1731
                     /locus_tag="VIQ50_13790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012485069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CbtA family protein"
                     /protein_id="HEY9361502.1"
                     /translation="MVRSLLVRGMLVGIVAGLLSFAFLKIYGEPQVDIAIAFETQMKA
                     AEAAAASSVEHEHELVSRKVQAGLGLFVAVMAYSVAFGGLFGLAYAFAYRRVPGAVTP
                     LGVAILLAAAGFVAIYLVPNLKYPANPPAVGDAKTIGVRTALYFIMIAVSIAAMIGAF
                     SLKRLLARRLSDWNSTLAVVAYYVVIVAIAGLLLPAVNEVPAQFPAVVLWKFRVASIG
                     AQFIMWATLGLLFGALTQRAAAPDGLRV"
     gene            1745..2323
                     /locus_tag="VIQ50_13795"
     CDS             1745..2323
                     /locus_tag="VIQ50_13795"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEY9361503.1"
                     /translation="MTARLILICHASTAAVRSSSFPADEPLDQHGEASAAALAGRLPS
                     ADRWLTSPELRARDTARALGFDAVVEQALRDCDYGSWSGRSFEDVCVREPNAVAVWLN
                     DPAATPHGGKSILRLMQRIADWLQGEQAHHRRSIVVTHPAVIRAVILCAIGAPAECFW
                     RIDIAPLSATGLSGAAGRWNLSFAGCAGQDRL"
     gene            complement(2503..>2750)
                     /locus_tag="VIQ50_13800"
     CDS             complement(2503..>2750)
                     /locus_tag="VIQ50_13800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020095994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361504.1"
                     /translation="LAPVRKDEPVAFELPPIEKPADIVAATASIVAAVAAGELTPSQA
                     AEVSKVIDIHVRALENKGFDERLTKLENQRRQNELKR"
BASE COUNT          419 a          881 c          900 g          550 t
ORIGIN      
        1 cgaggcggca cgcatgccgg gctcgggcaa gctcatcctc acgggtcagc tcggcgaggt
       61 gatgaaggaa agcgcgcagg cggcgctcac gctggcgaag gcgcgcgcgg cagagctcgg
      121 cttcgacgtc gccctgttcg agaaatccga tattcacatc cacgtgccgg caggcgcgat
      181 ccccaaggat ggcccgagcg cgggcgtcgc catgttcgtg gcgctggcgt cgctgctcac
      241 cggccgcacc gcgcgcaacg acacggcgat gaccggcgag atctcgttgc gcggtctcgt
      301 gctgcccatc ggcggggtga aggagaaggt gctggcggcg gcgcgcgccg gcatcaccac
      361 ggtgcttcta cccgcgcgca accaaaagga tttggaggac gtgccggagg ccgcgcgcca
      421 acaggtgcgt ttcgtctggc tagaacgggt ggacgacgcg gtggccgcgg cgcttaaccc
      481 gcccggcacg cgcgaggagg cggaaagctc cgtcgcggga gaaacctccc cggcgcgacg
      541 cgcggcgcgc tcggcctagc gtgtggtgat gccttcgttt cgcctcgacg tttgacaaga
      601 ccaagcatcg tttcctatcg tgcagatgta ttcgcgaagc gggaagccgg tgagagtccg
      661 gcgcggtcgc gccaccgtat tcgaccttta ggcgtcgaga gccggacgcc gttcgcgata
      721 gctttgacgt tctaacggga cgcgtaatcc caggagaata ttcatgacag acacgacatt
      781 gaggtcgttt gcaccggcgc tgccgacggc catcccggtc cgcgaagttc tgccctgggc
      841 aatcttcgcc ggcctgctcc tgcttttggc gctctatttc gtcggtgccg agcaaggcgc
      901 gacctcgctt atcagcggca tgtatatgca cgagttcttg cacgacggac ggcatctgct
      961 cggcttcccc tgccactgat tcgatccgcc atggtgaggt ctcttctcgt gcgcggcatg
     1021 ctggtcggca tcgtcgcggg attgctgtcc ttcgcttttt tgaaaatcta cggcgagccg
     1081 caagtcgaca tcgccattgc cttcgagaca cagatgaagg ccgctgaagc agcggctgct
     1141 tcatctgtcg aacacgaaca cgaattggtt agccggaagg tgcaagcagg cctcgggctg
     1201 tttgttgcgg tgatggccta ttcggtcgcc ttcggcggat tgttcggttt ggcctatgct
     1261 ttcgcctatc ggcgcgtacc gggagcggtg acgccgctgg gggtagcgat cttgctcgct
     1321 gccgcgggtt tcgtcgccat ttatctggtg ccgaatctca aatatccggc caacccgccc
     1381 gcggtgggcg acgccaaaac catcggcgtg cgcaccgctc tgtattttat catgatcgcc
     1441 gtctcgattg cggcaatgat cggcgcattc tcgctcaagc gcctcctggc ccgccgcctc
     1501 agcgattgga attcgacgct cgctgtcgtc gcttactacg tcgtgatcgt ggcaatcgcg
     1561 ggcctcttgt tgccggccgt caacgaagtc cctgcgcagt ttcccgcggt ggtcctgtgg
     1621 aagttccgcg tcgcttcgat cggcgcgcag ttcatcatgt gggctacgct cggtttgctg
     1681 ttcggagcat tgacgcagcg cgccgcggcg cctgacgggc tgcgcgtcta gccgaagcat
     1741 tgcggtgacg gcgcgcctca ttctgatttg tcacgcctcg accgcggcgg tgcgcagctc
     1801 ttcgtttccg gccgacgagc cactcgacca gcacggcgag gccagtgccg cggcgctggc
     1861 cggtcgattg ccgagtgccg atcgttggct cacgagcccg gaattgcgcg cacgcgacac
     1921 cgcgagggcg cttggcttcg atgccgtcgt cgagcaggcg ctgcgcgatt gcgattacgg
     1981 gtcttggagt gggcgcagct tcgaagatgt ttgcgtacgc gagccgaacg ccgtcgcagt
     2041 ttggctcaat gatcccgcgg caacgccaca cgggggcaag tccatccttc gcctgatgca
     2101 gcggatcgcc gactggctcc aaggcgagca agcccaccat cggcgctcca tcgtcgtcac
     2161 gcatcccgcc gtcattcgtg ccgtcatcct ttgcgcgatt ggagcaccag ctgagtgctt
     2221 ctggcgcatc gacatcgccc cgctgtcggc gacggggctg agcggcgccg ccggccgctg
     2281 gaatctgtct ttcgccggct gcgcgggcca ggatcggctc tagcccgcac ccgcgctggg
     2341 ccgcatcgtt cgcggcgggc cacgtgcgcc tctacacgca tcggtaggta ttttcattgt
     2401 aaataacaat cccgaaacaa cggccgctcg ttttctgcaa ccggcggtat gcgtcgcgat
     2461 gagcgcctgc acgggtatgc aggcgcgccg atgcgtgcgg ggtcatcgtt tcaactcgtt
     2521 ttgcctccgc tggttttcga gcttggtgag acgctcgtcg aagcccttgt tttcgagcgc
     2581 acgcacgtgg atgtcgatca ccttggacac ctcggcggct tgcgacggcg tgagctcgcc
     2641 ggcggcaacc gcggcgacga tgctcgccgt cgcggcaacg atgtcggcgg gcttttcgat
     2701 cggcggcaac tcgaacgcga ccggctcgtc cttgcgcacc ggcgcaagcc
//
LOCUS       DATCWM010000699         3417 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_70067, whole genome shotgun sequence.
ACCESSION   DATCWM010000699 DATCWM010000000
VERSION     DATCWM010000699.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3417)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3417)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3417
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70067"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(65..673)
                     /locus_tag="VIQ50_13805"
     CDS             complement(65..673)
                     /locus_tag="VIQ50_13805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY9361505.1"
                     /translation="MQNQYVLRDIASPHLRAAAQETSDEALIGLIADGDKRAMQVLYA
                     RHNVRVYRFILRLTGNQSLAEDLVSEVFLDVWRQAEAFESKSQVSTWLLAIARYKSLS
                     ALRRRTDEPLDDHMAATIEDTADDPETVVHNMDRSIIVQKCLRQLSPAHREVIDLVYY
                     HEKSVDEVAQIVGVPPATVKTRMFYARNKMADLLKQSGVNAL"
     gene            complement(853..1608)
                     /locus_tag="VIQ50_13810"
     CDS             complement(853..1608)
                     /locus_tag="VIQ50_13810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018316843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY9361506.1"
                     /translation="MTQAQHIIVVDDEQPAREMVGDYLRMHGFTVSLCDGGASLRKTI
                     GQQVPDLIVLDLNMPEEDGLSVIRDLKRRTSVPIIMLTATASAIDRVVGLELGADDYL
                     AKPCELRELLARIRSVLRRSGAGQPAREPAGAPAAPAAPASTRVRFGTKWLDHDAQAL
                     RDDEGNEHPLTASEYGLLKVFAANPKRVLSRDRLLELANARDAEAFDRAIDLRIMRIR
                     RKIEPDPARPSVIRTVRGGGYLFSPTGEASALD"
     gene            complement(1605..3338)
                     /locus_tag="VIQ50_13815"
     CDS             complement(1605..3338)
                     /locus_tag="VIQ50_13815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018316844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3369 domain-containing protein"
                     /protein_id="HEY9361507.1"
                     /translation="MAEDDIVQLIDDPREKPAEQGPRWRIAVIDDEPAVHDGTRFALS
                     DYRLHGQGLEILSAYSAAEGRELMRRHSDVAVVLLDVIMETDTAGLSLVEFIRKELKN
                     ETVRIILRTGQPGQAPERRVIVDYDINDYKAKTELTADKLFTSLTAALRSYQQLQRMV
                     ETRRGLEIIIDAASTLFDFKSMQRLAEGVLTQIGSLLNVDCAGILVLREPQNAHETFS
                     VLAGSGCYSRFIGSEVSQILESDLRRLVEEAFARRHHEFSSRRSVLYIRTVSGREVVV
                     VLEAARQLSSTDRTLVEIFCSRLSVAFDNVILYEQLQLANTRLEERVAARTQELTNAN
                     RRLAAQWARLRQANSFKSEILGTVAHDLKNPLGVILGRTEILKEMIAGAGALDENVKV
                     QIAYIRDAANRLTEMVDDLVADAMADALDITVRREPVDITVLVQEVAEANRPLAARKQ
                     QTITVTAPANHIAMCDADRVREAIDNLVSNAVKYSPIGGAIDLLVGEEDGGILVQVSD
                     QGAGLSPEDISRLFGRFQRLSAKPTAGESSTGLGLSIVKRIVDLHGGRIAVESAGPGQ
                     GATFKMTLPVT"
BASE COUNT          588 a         1069 c         1094 g          666 t
ORIGIN      
        1 cagcccgctc ggcctgatca tggacattga ggttgagatc gtccgaggga cacggacgcc
       61 gcgatcagag tgcattcact cccgactgtt tgagaaggtc ggccattttg ttccgggcat
      121 agaacatgcg ggtcttcacc gtcgccggcg gcacgcccac gatctgcgcc acctcgtcga
      181 ccgacttctc gtgatagtac acgagatcga tcacttcccg gtgtgcgggc gagagctgcc
      241 gcaggcactt ctggacgatg atgctgcggt ccatgttgtg gaccacggtc tccggatcat
      301 cggcggtgtc ctcgatggtt gccgccatat gatcgtccaa gggctcgtcc gtccgccgcc
      361 gcagcgccga gagcgacttg tagcgggcga tcgcgagcag ccaggtggaa acctgggact
      421 tggattcgaa agcctcggct tgccgccaga cgtcgaggaa aacctcgctc acgagatcct
      481 cggcgagcga ctggtttccg gtcagccgga ggatgaaccg gtacaccctc acattgtgcc
      541 gggcatagag cacttgcatg gcgcgcttgt cgccgtcggc gatgaggcca atgagcgcct
      601 cgtccgacgt ctcctgcgca gcagcccgca agtgcggcga cgcaatgtcg cgcagcacat
      661 actgattttg cataacgatc ccctgttagt cagcccttaa ccaacgtcac tagcaaaggc
      721 ctgttgctgc gttgttacgt caggggagaa aaatggtttc gtcgcggggg cgaattattt
      781 cgtcgtgaaa ccggcgacga aataaaggta gcgaaatacc gcaagtgttt cgtccggtga
      841 ggcatttttg cctcagtcca gcgcagatgc ttcgccggtc ggggaaaata aatagccgcc
      901 gccacgcacc gtgcggatga cggaaggccg ggcagggtcg ggctcaattt ttcgccgaat
      961 gcgcatgatt cgcaggtcga tcgcccggtc gaaggcctcc gcgtcgcggg cgttggccaa
     1021 ttccagcaag cgatcgcgcg acagcacccg cttggggttg gcggcgaaca ccttgagcag
     1081 gccgtattcc gaggccgtca gcgggtgctc gttgccttcg tcatcgcgca gcgcctgggc
     1141 gtcatggtcg agccacttgg ttccaaatcg cacccgcgtg ctcgccggcg ccgccggcgc
     1201 cgccggcgca cctgcgggct ccctggccgg ctgaccggcg ccgctcctgc gcaacaccga
     1261 gcggatgcgc gccaagagct cgcgcagctc gcacggcttg gccaggtagt cgtcggcgcc
     1321 gagctcgagg ccgaccacgc ggtcgatcgc gctcgcggtt gcggtgagca tgatgattgg
     1381 aacgctggtg cgccgcttga gatcgcggat gacagataga ccgtcctcct ccggcatatt
     1441 gagatcgagg acgatcaggt ccggcacctg ctgcccgatc gtcttgcgca gacttgcacc
     1501 gccgtcgcac aaactgacgg taaagccgtg catgcgcaaa tagtcgccga ccatctcgcg
     1561 cgcgggctgc tcgtcgtcca ccacgatgat gtgctgcgcc tgggtcatgt caccggcaat
     1621 gtcatcttga acgtcgcgcc ctgccccggg cccgcgcttt caaccgcgat ccgcccaccg
     1681 tgcagatcga cgatacgctt gacgatcgaa aggccgaggc cggttgagct ttcgccggcg
     1741 gtcggcttcg ccgaaagccg ttggaaacgg ccaaacagtc gggaaatatc ttccggcgaa
     1801 aggcctgccc cctggtcgct gacctgaacc agtataccgc cgtcctcctc tccgaccaag
     1861 aggtcgatgg ctccgccgat cgggctatac ttgacggcgt tgcttacgag attgtcgatt
     1921 gcctcgcgga cgcggtccgc atcgcacatg gcgatatgat ttgcaggcgc ggtgaccgtg
     1981 atggtttgtt gcttgcgcgc ggcgagcggg cggtttgcct ccgccacttc ctgcaccagg
     2041 acggtgatat cgacgggctc gcggcggact gtgatgtcga gggcgtctgc catcgcatcc
     2101 gccacgagat cgtctaccat ttccgtcagt cgattggctg cgtcgcggat ataggcgatc
     2161 tgcaccttca cgttctcgtc gagcgcgccc gctccggcga tcatctcttt caagatttcg
     2221 gttcggccga ggatcacgcc gagcggattt ttcaggtcgt gcgcgaccgt gccgaggatt
     2281 tcgctcttga aggaattggc ctgccgcagc cgcgcccatt gcgcagcgag ccggcgattg
     2341 gcattggtca gttcttgagt gcgcgcggcg acgcgctcct cgagtcgcgt gttcgccagc
     2401 tgcagctgct cgtagagaat gacgttgtcg aacgcgaccg atagccggct gcaaaagatc
     2461 tcgaccaggg tgcggtcggt gctggagagt tgccgggcgg cctcgagcac gacgacgact
     2521 tcgcggccgc tcaccgtcct gatgtaaagc accgatcggc gcgacgagaa ctcatggtgc
     2581 cggcgggcga acgcttcctc gacaagccgg cgcaggtcgg attcgaggat ttgcgatact
     2641 tcgctgccga tgaaacggct gtagcaaccc gaaccggcga gcaccgagaa cgtctcatgg
     2701 gcgttttgcg gctcgcgcaa caccaggatt ccggcgcagt ccacattcag caacgacccg
     2761 atctgggtga gaacgccttc ggccagccgc tgcatcgatt tgaaatcgaa caaagtcgat
     2821 gccgcgtcga tgatgatctc gaggccgcgg cgggtctcca ccatgcgttg cagctgctga
     2881 tagctgcgca gcgcggcggt caacgacgtg aacagcttgt cggcggtgag ctcggttttc
     2941 gctttgtagt cgttgatgtc gtagtcgacg atcacccgcc gctccggcgc ctggccgggt
     3001 tggccggtgc gcagaatgat gcgcacggtc tcgttcttga gttccttgcg gatgaattcc
     3061 accaggctca gcccggcggt atcggtctcc atgatcacgt cgagcaggac gacggcgaca
     3121 tccgaatggc gccgcatgag ctcgcggcct tcggcagccg aataggccga caggatttcg
     3181 agcccctgtc cgtgcaggcg atagtcgctg agcgcgaagc gcgtgccgtc gtgcacggcc
     3241 ggttcgtcgt cgatgacggc gatcctccag cgcgggccct gttcggcggg cttctcccgc
     3301 ggatcgtcga tcaattggac gatgtcatcc tcagccatgc gggtcatcca tcattgtgcg
     3361 gcctcctccg gctgcgtttc gccgggcgcc acgcggggca gggtgatgcg aaaccgc
//
LOCUS       DATCWM010000700         2044 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_372475, whole genome shotgun sequence.
ACCESSION   DATCWM010000700 DATCWM010000000
VERSION     DATCWM010000700.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2044
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_372475"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1203)
                     /gene="gorA"
                     /locus_tag="VIQ50_13820"
     CDS             complement(<1..1203)
                     /gene="gorA"
                     /locus_tag="VIQ50_13820"
                     /EC_number="1.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004362 - glutathione-disulfide reductase
                     (NADP) activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-disulfide reductase"
                     /protein_id="HEY9361508.1"
                     /translation="MADHDLDLVVIGAGSGGVRAARIAAGYGARVLIAEEYRVGGTCV
                     IRGCVPKKLLVYASRFADEFEDAAGYGWTLQEPRFDWPTLIANKDREIARLELAYTTN
                     LERAGVKLAKSRAILEDAHTVRLVATGETIRPRYILIATGAAPWFGPPIPGIEHVISS
                     NEAFHLDELPARILIQGGGYIAVEFAAIFNGLGSEVTLVYRGENILRGFDDDLREHLK
                     SEMTKLGVRIVCGKTVSAVQRTQRAFNAKLSDDSTVEVDKVMFAVGRWPNVAGFGLDE
                     AGVRCAAGRGIAVDPLSQTSVPHIYAIGDVTNRVNLTPVAIREGHAFADTVFGGKPTA
                     VDHIDVPTAVFSEPEVGTVGLTEAQACQRLAKVDVYKTSFRPLKMTLAARDMRAFFKL
                     VVDGESGRV"
     gene            complement(1238..1753)
                     /locus_tag="VIQ50_13825"
     CDS             complement(1238..1753)
                     /locus_tag="VIQ50_13825"
                     /inference="COORDINATES: protein motif:HMM:NF021361.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2059 domain-containing protein"
                     /protein_id="HEY9361509.1"
                     /translation="MFAFPTARPTGAFILALGFALALGVGAAAAEEPSKTAIATAKEV
                     ITAKGASSLYSPLVSGVIERTKIVLLQSNPMLGKDLNEVAAKLHTDYAPRSAELLNEV
                     AKLYASRFTEQELKDTLNFYKSPLGRKLVVEEPNILDQSMKTAQTWAENLSQEIIAKM
                     RAEMKKRGHDI"
     gene            complement(1781..>2044)
                     /locus_tag="VIQ50_13830"
     CDS             complement(1781..>2044)
                     /locus_tag="VIQ50_13830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase A"
                     /protein_id="HEY9361510.1"
                     /translation="RRAVEGAAAAVGCAGPALLRRAKDGHAFVTDGGHWILDAAFERI
                     ADPKALAERLDGITGVVEHGLFIGLAHAAIIAGSSDVRVVERR"
BASE COUNT          357 a          665 c          657 g          365 t
ORIGIN      
        1 gacccgcccg ctctcgccgt cgaccacgag cttgaagaag gcgcgcatgt cgcgggcggc
       61 gagcgtcatc ttcagcggac ggaacgaggt cttgtaaacg tcgactttcg ccagccgctg
      121 gcaggcctgt gcctcggtca ggcccaccgt gccgacctcg ggctcggaga acacggcggt
      181 cggtacgtcg atatgatcga ccgcggtcgg cttgccgccg aacacggtat cggcgaaggc
      241 gtggccctcg cggatggcga ccggcgtgag gttcacacgg ttggtgacgt cgccgatcgc
      301 gtagatgtgc ggcacggagg tctgcgacaa cggatcgacc gcgatgccgc ggccggcggc
      361 gcaccgtacg cccgcctcgt cgagaccaaa accggcgacg ttcggccagc gcccgaccgc
      421 gaacatcacc ttgtcgactt ccaccgtgct gtcgtcggac agcttggcgt tgaaagcacg
      481 ctgcgtccgt tgcactgcgc tcaccgtctt gccgcagaca atgcgcacgc ccagtttggt
      541 catctccgac ttgagatgct cgcgcagatc gtcgtcgaaa ccgcgcaaga tattctcgcc
      601 ccggtagacc aaagtcacct cggaccccag cccattgaag atggcggcga actcgacggc
      661 gatgtagccg ccgccctgga tcaggatgcg ggcgggcaat tcgtcgagat ggaaggcctc
      721 gttcgaggag atgacatgtt cgatgccggg gatcggcgga ccgaaccacg gcgccgcgcc
      781 ggtggcgatc aggatgtagc gcggacgaat cgtttctccc gtcgcgacca ggcgcacggt
      841 gtgcgcatcc tccagtatgg cgcggctctt ggcgagtttg acgccggcgc gctcgaggtt
      901 ggtggtatag gcgagttcaa gccgcgcgat ctcccgatcc ttgttggcga tgagtgtcgg
      961 ccagtcgaac cgcggttcct gcagcgtcca gccgtagccg gccgcgtcct cgaactcgtc
     1021 ggcaaagcgc gaggcataga cgagcagctt cttgggaacg caaccgcgga tcacacaagt
     1081 accgccgacg cggtactcct cggcgatcag aacgcgggcg ccgtaaccgg ccgcgatccg
     1141 cgccgcgcga accccgcccg agcccgcgcc tatgacgacg agatcgaggt catggtcagc
     1201 catatcgtgg cgtccaggcc gccggcggac gtagcatcta gatgtcgtgg cctcgttttt
     1261 tcatttctgc gcgcattttg gcgatgatct cttgcgatag attctcggcc caagtctggg
     1321 cggttttcat gctctgatcg aggatattgg gctcctccac caccaacttg cggccgagcg
     1381 gcgacttgta gaagttgagc gtgtccttga gttcctgctc ggtgaaacgc gaggcgtaga
     1441 gcttggcgac ctcgttgagg agctcggcgc tgcgcggggc gtagtctgtg tgcaatttgg
     1501 ctgcgacttc gttcaaatcc ttgcccaaca tcggattgga ttgcagcaac acgatcttgg
     1561 tcctctcgat cacgcccgag accaaggggc tgtagagcga gctggcgccc ttcgccgtga
     1621 tgacttcctt cgccgtcgcg atggcggttt ttgaaggttc ttctgcagcg gcggcaccga
     1681 caccaagcgc aagagcaaac cccagcgcaa ggatgaaggc gccagttggc ctggcggttg
     1741 ggaaagcaaa catcaaaccc tcctctcggg tgatccgggc tcagcgccgc tcgaccacgc
     1801 gcacgtcgct cgagccggcg atgatcgccg catgagcgag cccaataaac agaccgtgct
     1861 cgaccacgcc tgtaatgccg tcgagacgct cggcgagcgc tttcggatcg gcgatccgct
     1921 cgaaagcggc atccagaatc cagtgccctc cgtccgtgac gaaagcgtgg ccgtccttgg
     1981 cgcgccgcag cagcgcgggc ccggcgcaac ccaccgccgc ggccgccccc tcgaccgccc
     2041 tgcg
//
LOCUS       DATCWM010000701         2281 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_329252, whole genome shotgun sequence.
ACCESSION   DATCWM010000701 DATCWM010000000
VERSION     DATCWM010000701.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2281)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2281)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2281
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_329252"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1568)
                     /locus_tag="VIQ50_13835"
     CDS             complement(<1..1568)
                     /locus_tag="VIQ50_13835"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein"
                     /protein_id="HEY9361511.1"
                     /translation="MGARHFGARVARLEDPALLTGRGRFVDDIRLAGALHACFVRSPY
                     SHAKVRTIDATAARAMRGVHAVLTVDDLPARMARSQIPMLVPNPSIATPRTQLALARR
                     EVCYVGQTIAVAIADNRYLAEDAAAAVDVDFEILPAVSNCREAAAPHAPSVHSDLTTN
                     VAAVVAMNYGDLEAAFARAAHVFEEEFSLHRGGAMTLEGRAVLASYDAGADMLTVWSA
                     TQTPHLCRATLADLLERDLESIRVIAPHVGGGFGTKAPFYAEEAVIPAAAMILGHPVA
                     WQEDRREHFLSATQERDQHWKVAIAVDSAGKILGLSGTLLHDTGAFLPWGIIVPYIAA
                     TTFPGPYLVPAYRIEATVVFTNRVPTTVVRGAGRPQAVFAMERLMDRVARELAVDRAE
                     LRRRNMIGPEQMPYSLGLVFRDGKPLVYASGDFPKSQQQALARADYEHFSIRQSKGRA
                     EGRYFGIGVANYVEGTGLGPFEGVTVRVLPNGKVAVVTGATTQGQGTLTTLSQIVADE
                     VGCRLEDIVMTAGDT"
     gene            1677..2114
                     /locus_tag="VIQ50_13840"
     CDS             1677..2114
                     /locus_tag="VIQ50_13840"
                     /inference="COORDINATES: protein motif:HMM:NF045191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361512.1"
                     /translation="MLDVDARRAAQKPDTGPPLDFQSHLAALEARGLLLRIDRPINKD
                     TELHPLVRWQFQGGLKEDQRRAFLFTNVIDSSGRRYDIPVAVGALAASPRIYAVGMGR
                     PVEEIEAAWVRAITSPIPPILVDAPPCQAVVITGEELSASARA"
     gene            2060..>2281
                     /locus_tag="VIQ50_13845"
     CDS             2060..>2281
                     /locus_tag="VIQ50_13845"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase domain-containing
                     protein"
                     /protein_id="HEY9361513.1"
                     /translation="MPGGRDHRRGAERIGKGLTRLPVPISTPGFDAAPYLTATLCVTR
                     DPETGIQNMGTYRAALKATDRLGVRMASRI"
BASE COUNT          401 a          738 c          753 g          389 t
ORIGIN      
        1 gtgtcgccgg cggtcatgac aatgtcttcc agccggcagc cgacctcatc ggcgacgatc
       61 tgcgaaagcg tcgtgagcgt gccttgccct tgtgtcgtgg cgccggttac caccgcgacc
      121 tttccattgg gcagaacgcg cacggtgacg ccctcgaacg gcccgagtcc tgtcccttcg
      181 acgtaattgg cgacgccgat gccgaagtat cttccttccg cgcgtccctt actttggcgg
      241 atggaaaaat gctcatagtc ggcgcgcgca agtgcctgct gctggctttt cggaaaatct
      301 ccgctggcat acacgagcgg ctttccgtcg cgaaacacca atccgaggga atagggcatc
      361 tgctcggggc cgatcatatt gcgtcgacgc agttcggcgc gatcaactgc gagttcgcgt
      421 gccacccggt ccatcaaccg ctccatcgcg aaaaccgcct gcggccggcc ggcgccgcgc
      481 acgaccgtgg tcggcacgcg gttggtgaac acgaccgttg cctcgatgcg ataagccggc
      541 accagataag gaccggggaa tgtcgtggcc gcgatgtaag gcacgatgat gccccagggc
      601 aggaatgcgc cggtgtcgtg caggagcgtg ccggagagcc cgagaatctt gcctgcgctg
      661 tcgacggcaa tggctacttt ccagtgttga tcgcgttctt gtgtcgccga gagaaaatgc
      721 tcgcgccggt cctcctgcca ggcgaccggg tggccgagaa tcatcgcggc cgccggaatg
      781 acggcctcct cggcatagaa cggcgccttg gtcccgaagc cgccgccgac gtggggcgcg
      841 atgacccgga tcgactccag gtcgcgttcg agaaggtccg cgagcgtggc ccggcaaagg
      901 tgcggcgtct gcgtcgccga ccatacggtc agcatatcgg cgccggcatc gtagcttgcc
      961 agcacggcgc ggccttcaag cgtcatggca ccaccgcgat gtaatgagaa ttcctcctcg
     1021 aaaacgtgtg cggcgcgcgc gaatgccgcc tcgaggtcgc cgtagttcat ggcgacgaca
     1081 gcggcgacat tggtcgtgag atcgctatgt acagacggcg catggggcgc cgccgcctcg
     1141 cggcagttgc tgaccgcggg caaaatctcg aagtccacgt cgaccgccgc ggcggcgtcc
     1201 tctgcgagat agcgattgtc cgcgatcgcg accgcgatgg tttgaccgac gtagcagact
     1261 tcgcggcgtg ccaaggcgag ctgcgtgcgc ggcgtggcaa tcgacggatt gggcacgagc
     1321 atggggatct ggctgcgcgc catacgcgcc ggcagatcgt ccacggtcag caccgcatgc
     1381 acgcctcgca tggcgcgcgc cgccgtcgcg tcgatcgtgc ggactttggc gtgggaataa
     1441 gggctgcgca cgaaacaggc gtgcagcgcg ccggccagcc tgatgtcgtc gacgaagcgc
     1501 ccgcgtccgg tcagcagcgc cggatcttca aggcgcgcga cgcgggcgcc gaaatgtctc
     1561 gcgcccatgg ttggatgtcc cggaacagcg caacgcggcc gcccacgata taccgaaagc
     1621 gttgcattgc aatcgccgcg gatcgtacct tagcgaaagg caagaaggtc gcgaccatgc
     1681 tggacgtcga tgcgcgtcgg gccgcacaga agccggacac cgggccgccg ctcgattttc
     1741 aatcacatct cgccgcgctc gaggcgcgag gattgctgct gcgcatcgac cgcccgatca
     1801 acaaggatac cgagttgcac ccgttggtgc gttggcaatt tcaaggagga ctgaaggagg
     1861 atcaacggcg cgcgttcttg tttaccaatg tcatcgattc ctcgggccgt cgctatgaca
     1921 ttccggtggc agtcggggcg ctcgccgcct cgccgcgaat ttatgcggtc ggcatgggcc
     1981 gcccggtgga ggagatcgag gcagcgtggg tccgcgcgat caccagcccg atcccgccca
     2041 tcctcgtcga cgcaccgcca tgccaggcgg tcgtgatcac aggcgaggag ctgagcgcat
     2101 cggcaagggc ctgacgcgcc tgccggttcc gatctcgacg ccgggtttcg acgcggcgcc
     2161 ctatctgacc gcgacccttt gcgtcacgcg cgatcccgag accggcatcc agaacatggg
     2221 aacatatcgc gccgccctga aggcgaccga taggctcggc gtgcgcatgg cctcgcgaat
     2281 c
//
LOCUS       DATCWM010000702         5066 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_382986, whole genome shotgun sequence.
ACCESSION   DATCWM010000702 DATCWM010000000
VERSION     DATCWM010000702.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5066
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_382986"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            10..1152
                     /locus_tag="VIQ50_13850"
     CDS             10..1152
                     /locus_tag="VIQ50_13850"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY9361514.1"
                     /translation="MRRRSSVSTRSSFAGAISSARPRCRTGSATVEPLAIETATDSGD
                     YAATLARCLKEIDWTAKETMQGKLIEGRYRGSAVGCYLEGGASGPHETARLVLEPDGK
                     IAVYVGSSSIGQGLETVCAQIAADALELPMNEISGVFHGSTDHVSDGCGSYSSRAVVM
                     GGNAILAAAAKLRDGVRAAAAARWGCTTDEVKIDAGAVHGPSKQALPLAGFAGITAES
                     TYASNKRTYSYGSHAAHVAVDPKTGSVELLDYVAVEDAGRIINPLTLHGQVVGAIVQG
                     LGGAFLEQFVYDQEGQLLTGSLADYLMPTASDFPNIRAIALEECPSPNNPLGAKGAGE
                     GGVIPVGGVIANAVAAALGSLGVAPRDLPLSPPRVWELIRERTAAR"
     gene            complement(1265..2296)
                     /locus_tag="VIQ50_13855"
     CDS             complement(1265..2296)
                     /locus_tag="VIQ50_13855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEY9361515.1"
                     /translation="MKRLRVLVLVHPELVPPDSLKGHSEQEINEWKTEYDVVSTLRAA
                     GHEVRPLGVENELKPIRDEIESWKPTVVFNLLEQFHGEAVYDQNVASYLELLRVPYTG
                     CNPRGLVLSRGKDLSKKLLMYHRIPLPAFAVFPPRRKIRRPSRLGFPLIVKSLNEDAS
                     WGISQASVVDSDEKLAERVNFIHGSIGTAAIAEQYIEGRELYVGVLGNERLRVFPIWE
                     LEFGSMPQGARLIATEKVKHDLQYQQRHDIAVGPAKDIPPQLADSIKRAAKRIYRTLD
                     LDGYARIDFRLSADGIPYYIEANPNAEIARSEEFASAAKHDGLDYPELIQRILALGIS
                     RAGATGIAL"
     gene            complement(2293..3318)
                     /locus_tag="VIQ50_13860"
     CDS             complement(2293..3318)
                     /locus_tag="VIQ50_13860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007596824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative zinc-binding metallopeptidase"
                     /protein_id="HEY9361516.1"
                     /translation="MPRRFAWASLSDSELLELRLKDLKVSLSGTWLERCLADLYGELN
                     ERGLRIRPHAWISNEWFSPDDTPGIAIPFYLSHPRLMRLERKMIIDVEGGTVPECMRI
                     LRHEAGHVLQVSYQLHRRRRWQELFGPSSTRYPRYYRPNPASRRYVYHLPLWYAQSHP
                     DEDFAETFAVWLTPRSNWRRRYAGWPALKKLEYVDELMAEIATKKPAVTRRLRVEPLS
                     QLTQTLAEHYEKKRAHYAIDYPKIYDRDLRRIFSDDPRHRRSLAASAFLRRNRAKIRQ
                     VVSKWTGEYQLTLDSVFDDMIGRCRELKLRAVGSERQLRMEFIVLLTAKTVHSLYSPS
                     RRQWLAL"
     gene            3522..4379
                     /locus_tag="VIQ50_13865"
     CDS             3522..4379
                     /locus_tag="VIQ50_13865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HEY9361517.1"
                     /translation="MKLPPFEYACPTTLPEAVQLLAGHDGEAKALAGGQSLVPMLAFR
                     LAQPALLVDLRKLADLRGIRISEKGVALGAMVRWREIEDDERLDTAHPLLKAAIAHVA
                     HYQVRNRGTVGGSLAHADPAAEMPGIAMTCDAEIAVVGKSGARVIQAADFFQGALTTA
                     LTSDEIIVEVSLPAWPARRRWGFEEFARRRGDFAMAAAAVFYDESEDGKARNAHVGVI
                     GVADRPLRLPAVEEVLNGRTIDQATIAEAETATSAAVDPQDDIHASAAYRRALVGTMV
                     ERALKRAAA"
     gene            4417..4917
                     /locus_tag="VIQ50_13870"
     CDS             4417..4917
                     /locus_tag="VIQ50_13870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEY9361518.1"
                     /translation="MSVRFRVNGREVDVDVEPRLTLADCLRHHLRLTGTHVGCEHGVC
                     GACTILLEGAAVRSCLMLAVQAEGAEVVTVEGLSNDADLTPLQKSFRKHHALQCGFCT
                     PGMITTAHALLSEEPNCDAARVREVLSGNLCRCTGYIPIVEAVLEARAAYRPKAQAGD
                     RGGDRA"
BASE COUNT          916 a         1621 c         1647 g          882 t
ORIGIN      
        1 tgttcgacat tgcggcggcg gagctcggtc tcgacccggt cgagtttcgc aggcgcaatc
       61 tcatcagcga ggccgagatg ccgtaccggc tccgccactg tcgagcccct cgcgatcgag
      121 accgcaaccg acagcggcga ctacgcagcg acgctcgcgc gctgtctcaa agaaatcgat
      181 tggaccgcga aggagacgat gcagggaaag ctgatcgagg ggcgctaccg cggcagcgcc
      241 gtgggctgtt acctcgaagg cggcgcatcg gggccgcacg aaaccgcgcg gctggtactc
      301 gagcccgacg gcaagatcgc ggtttatgta ggctcttcct ccatcggtca gggactcgag
      361 acggtttgcg cgcagatcgc ggcggatgcg ttagaactgc cgatgaacga gatcagcggg
      421 gtgtttcacg gatcgaccga tcacgtgagc gacggctgcg gctcctacag ctcgcgcgcg
      481 gtcgtgatgg gcggcaacgc gatcctcgcc gcggcggcga agctgcgcga cggcgtgcgt
      541 gcagcggcgg ccgcgcgctg gggctgcaca accgacgaag tcaagatcga cgccggcgcg
      601 gtgcacggcc cgagcaagca agcgttgccg ctggctggct tcgccggaat cacggcggag
      661 agcacctacg ccagcaacaa gcgcacctac agttacggct cgcacgcagc ccacgtcgcg
      721 gtcgatccca agaccggcag cgtcgagctc ctcgactatg tcgcggtcga ggacgccggg
      781 cgcatcatca acccgctgac gttgcacggc caggtcgtag gcgccatcgt gcaaggcctc
      841 ggcggcgctt tcctggagca attcgtctac gatcaggagg ggcaattgct cacgggatcg
      901 ctcgcggatt atctcatgcc cacggcgagc gattttccca acatccgagc gatcgcgctc
      961 gaggaatgcc cctcgccgaa caatccgctc ggcgccaagg gcgcgggcga gggcggcgtc
     1021 attccggtcg gcggcgtcat cgccaacgcg gttgccgcag ccctcggctc gctcggggta
     1081 gcgccccgcg accttccgct gtcgccgccg cgggtctggg agctgatccg cgagcgcacc
     1141 gccgcgcgtt gatcgacttg gaggtccgtt tcggcaaatg ccgccaagcg caacttgaat
     1201 agcgcaggcg cgcggtgccg tgacgagcgc tatctttgcc gccggtcgct gcgtccggat
     1261 gggctcacag cgcaattccc gtcgcccccg cccggctgat gcccagcgcc aagatgcgct
     1321 ggatcaattc cggatagtcg aggccgtcgt gcttagccgc cgaggcgaac tcttcgctgc
     1381 gggcaatctc ggcgttgggg ttggcttcga tgtaataggg aatgccgtcg gcggagaggc
     1441 ggaaatcgat gcgggcatag ccatcgaggt cgagcgtgcg gtagatgcgc ttcgccgcgc
     1501 gcttgatcga gtcggcgagt tgcggcggga tatccttggc cggaccgacg gcgatgtcgt
     1561 ggcgctgctg gtattgcaga tcgtgcttga ccttttcggt ggcgatgagc cgggcgcctt
     1621 gcggcatgct accgaactcg agctcccaga tcgggaagac gcgaagccgc tcattgccca
     1681 gcacgccgac gtagagctcg cggccctcga tgtattgctc ggcgatggcg gcggtgccga
     1741 tgctgccgtg gatgaagttc acgcgctcgg caagcttctc gtcgctgtcc accaccgatg
     1801 cctgcgagat gccccaggag gcgtcctcgt tcagactctt gacgatgagc ggaaagccga
     1861 gacgcgacgg acggcgaatc ttgcgccgcg gcgggaacac ggcaaacgcc ggcaacggga
     1921 tgcgatgata catcagaagc ttcttcgaca aatccttgcc gcgcgagagc acgagccccc
     1981 gcgggttgca accggtatag gggacccgta gcaattcgag atagctcgca acgttttggt
     2041 cgtagaccgc ttcgccgtga aactgctcga gcagattgaa gacgaccgtc ggcttccagc
     2101 tctcgatctc atcgcggatc ggcttgagct cgttctctac tccgagcggc cgcacctcgt
     2161 ggccggcagc gcgcaacgtg ctcacgacat catattcggt cttccattcg tttatctcct
     2221 gttcgctgtg ccccttgagc gaatccggag gcaccaattc cggatgcacg agcaccagga
     2281 cccgaaggcg cttcataatg ccagccactg tcgtcgtgac ggactataga gcgagtgaac
     2341 ggtcttcgcc gtcaacaaca caatgaattc cattctcagc tgtcgctcgg agccgaccgc
     2401 acgaagcttc agctcgcggc agcggccgat catatcatcg aaaacggagt ccagcgtcag
     2461 ctgatactcg cccgtccact tcgaaacgac ttgcctgatc ttggcacggt tgcgccgcag
     2521 aaaggccgag gccgcgagcg agcggcgatg ccgcggatcg tcggagaaaa tgcggcgaag
     2581 atcgcggtcg taaattttcg ggtaatcgat cgcatagtga gctcgtttct tttcatagtg
     2641 ctcagccagc gtttgggtga gttggctcag tggctcgacg cgaagccgcc gcgtgacggc
     2701 cggcttcttc gtggcgatct cggccatcag ctcgtcgacg tattccagct tcttcagcgc
     2761 cggccaaccg gcgtagcgcc tgcgccagtt cgagcgcggc gtaagccaca ccgcgaaggt
     2821 ttcggcaaag tcctcatccg gatggctctg cgcataccac agcggcaaat gatagacgta
     2881 gcggcggctt gccggattcg gccgatagta tctcgggtag cgcgttgacg acggaccgaa
     2941 cagctcctgc cagcgccggc ggcgatgcag ttgataagaa acctgcaaca catggccggc
     3001 ttcgtgccgc agaatgcgca tgcactcggg cacagtgccg ccctcgacgt cgatgatcat
     3061 cttgcgctcg agccgcatca ggcggggatg ggaaagatag aagggaattg cgatgccggg
     3121 cgtgtcgtca gggctgaacc actcgttcga gatccaggcg tgcggcctga tgcgaagccc
     3181 gcgctcgtta agttcgccgt aaaggtctgc tagacaccgt tcgagccatg tgcctgagag
     3241 gctgaccttg agatccttga gacgcagctc gaggagttcg ctatccgata gtgaggccca
     3301 ggcgaaccta cgcggcatgg cactgcgaaa tccggaaaaa catcccccat ttcgataatg
     3361 cctaaaacga ccggcggcaa tcggcgggtg ccgaaacgcg ccatcaacgc aggcgggatg
     3421 gccgagttga ctaaggggct tgcggtcacg ttgacccatc catcgctgcg atgataggta
     3481 cgaccctcgc ctctttgcct cccgaaggat gcgcccgggc catgaaactg ccgcccttcg
     3541 agtatgcctg cccgacgacg ctccccgaag ccgttcaact tctcgccggg catgacggcg
     3601 aagccaaagc ccttgccggc ggtcaaagtc tcgtgccgat gctggcgttc cgccttgcgc
     3661 agcccgcgct actcgtcgac cttcgcaagc tcgccgatct gcgcgggatc aggatttccg
     3721 agaaaggcgt cgctctcggt gccatggtgc gctggcgcga gatcgaagac gacgaacggc
     3781 tcgataccgc gcatccgctg ctcaaggcgg ctatcgcgca tgtcgcgcat taccaagtcc
     3841 gcaaccgcgg cacggtcggc ggcagcctcg cccatgccga tccggcggcc gaaatgccgg
     3901 gaatcgccat gacctgcgat gcggaaattg ccgtggtcgg aaaatccggc gcacgcgtga
     3961 tccaggcggc cgatttcttt cagggggcgc tcacgacggc cctcacctcg gacgagatca
     4021 tcgttgaggt cagtctgccc gcctggcccg cgaggagacg ttggggcttc gaggaattcg
     4081 cgcgccgtcg cggcgacttt gcgatggcgg cagcggccgt gttctacgat gagtccgagg
     4141 acggcaaggc gcgtaacgcc catgtcggcg tcatcggcgt tgccgaccgg ccgctgcgcc
     4201 ttcccgcggt ggaagaggtg ctcaatggac gaacgatcga ccaagcaacc atcgcggaag
     4261 ccgagaccgc gaccagcgcc gccgtcgatc cgcaggacga cattcacgcc agcgccgcct
     4321 atcgccgcgc gctcgttgga acgatggtcg aacgcgcgct caaacgcgcg gccgcgtgag
     4381 cggattatga aacagcaagg cgatcggcga tcttccatgt cggtgcgatt tcgcgtcaac
     4441 ggtcgcgagg tcgacgtgga cgtcgagccg cggctcacgt tggcggattg tctgcgccat
     4501 catcttcgac tgaccggcac ccatgtcggt tgcgagcacg gcgtttgcgg cgcctgcacg
     4561 atcctcctcg agggcgcggc ggtgcgatcc tgcctgatgc tggcggtgca ggccgagggc
     4621 gccgaggtcg tgaccgtcga agggctatcc aacgacgccg atctcacgcc gctgcaaaaa
     4681 tcctttcgca agcatcacgc cttgcaatgc ggcttctgca cgcccggcat gatcacgacc
     4741 gcgcacgcgc tgctcagcga ggagcccaac tgcgacgctg cgcgcgtgcg cgaggtgctc
     4801 tcgggcaatc tctgccgctg caccggctat atccccatcg tcgaggccgt actcgaggcg
     4861 cgcgccgcct accggccgaa ggcgcaggcg ggcgaccgcg gcggagatcg cgcatgagaa
     4921 cggtcaattc gctcatcggc agcccgattg agcggcttga ggatctgcgc tttctccgcg
     4981 ggcgcggaca atacgtggac gatctcgcgc gcaaggacat gctgcacgcg gcgatcctgc
     5041 gcagctccgt tgcccacggc cgcatc
//
LOCUS       DATCWM010000703         2918 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_5176, whole genome shotgun sequence.
ACCESSION   DATCWM010000703 DATCWM010000000
VERSION     DATCWM010000703.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2918
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5176"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(407..1267)
                     /gene="istB"
                     /locus_tag="VIQ50_13875"
     CDS             complement(407..1267)
                     /gene="istB"
                     /locus_tag="VIQ50_13875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009209116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HEY9361519.1"
                     /translation="MPAGTTSGTPQVLLSHHLKQLKLPTVLREYDKVARECARDGVDH
                     PRYLLRLVELELIDRERRVVERRIKQARFPAVKSLDTFDFTAIPSLNKMLVLELARGE
                     FILRRENVIALGNSGTGKTHVALALGLAACQKGFSVTFTTAAALVHQLMEARDDRRLL
                     RLQRELQTVKLLIVDELGYVPLSPTGAELLFEVFSQRYECGATIVTSNLPFEDWTTVL
                     GSERLTGALLDRLTHHVHILTMNGDSYRLKQSAGRRRAATSTNAAEQNQAIAETDNQV
                     YAPAVDPGIV"
     gene            complement(1291..2790)
                     /gene="istA"
                     /locus_tag="VIQ50_13880"
     CDS             complement(1291..2790)
                     /gene="istA"
                     /locus_tag="VIQ50_13880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012778770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HEY9361520.1"
                     /translation="MFAVEVYAAVRHFVFVEGHSRREAARVFGLSRETVLKMCRFSLP
                     PGYTRTRPVAKPKLGPLLPVIDAILEADRTGPVKQRHTAKRIFERLRDEHGFDGGYTV
                     VKDYVRIARARSRETFVPLSHPPGHAQVDFGEAVGVIGGVRCKLHFFCMDLPQSDACF
                     VKAYPAETTEAFLDGHVSAFAFFGGVPLSVLYDNLKIAVAKICGDGKRERTRAFTELV
                     SHYLFSDRFGRPGKGNDKGKVEGLVKYARSNFMTPIPVAASFDDLNAMLTERCRARQM
                     ERAGRHAETIGARLAADLDAFRDLPAVPLEPCEKRAARVSSTALVRHRGNDYSVPTAY
                     GFQDIIVKGFVDQVVILCGGAEIARHQRSYGLGVFVFNPLHYLALIETKPNALDQAAP
                     LKDWELPETFQHLRHLLEARMGNRGKREFIQVLRLLEAIPKEVVTYAVTEAIRLGAIG
                     FDAVKQIALARIERRPARLDLTAYPHLPQTRVKTTSAADYAVLLPGRAA"
BASE COUNT          533 a          955 c          922 g          508 t
ORIGIN      
        1 accaatctca aattatttca gctgtaatgg ccctgttgtt gcaggccgcc ttgatcatag
       61 ttctcgcggt cgagcactgg cggagacgtc gagcggaaga gaccattcgc atgagcttgt
      121 ccgaatcgct cagactggaa agagttgcgt gcagctcaag atcgcctggt ccaggccgag
      181 agactggcct cgctgggcga acttaccgcg ggcatagccc acgaaatcaa tagtcccggg
      241 gttgcgcgca ggcgtgggca actgtcaacg gcggtcggaa tccaggccac tgcggcggag
      301 caaaagcagg ccagttcgag ctcggtggag gccgctcgcg aagcgcgctt ttcgatagcg
      361 ccgtagcgag cgagcggccg gtgggatttg gtcgggtggt tgaggctcag acgattcccg
      421 gatcgactgc aggggcatag acttgattgt ctgtttcggc gatggcctgg ttttgctccg
      481 ccgcgttcgt cgaggtggct gctcggcggc ggccggcgga ttgcttgagg cggtagctgt
      541 cgccgttcat ggtcaggata tgaacgtggt gggtcagccg gtcgagcagc gcaccggtga
      601 gccgctcgga gccaaggacc gttgtccaat cctcgaacgg caggttcgag gtgacgatgg
      661 tcgcgccgca ctcgtagcgt tgcgagaaca cctcgaacag gagctcggcg ccggttggcg
      721 acagcggcac gtagccgagc tcatcaacga tgagcagctt cacggtctgt agttcgcgct
      781 gcagcctcaa caggcgtctg tcgtcgcggg cctccatcag ctgatgcacc agcgccgccg
      841 cggtggtgaa ggtgaccgag aatcccttct ggcaggcggc aaggccaagc gccagcgcga
      901 catgggtctt gccggtgccg gagttgccga gcgcgatgac gttctcgcgg cgcaggatga
      961 actcgccgcg ggcgagttcg agcaccaaca tcttgttgag ggaaggaatg gcggtgaagt
     1021 cgaatgtatc gaggctcttc acagccggga atctggcctg cttgatgcgc cgctcaacca
     1081 cgcgccgctc ccgatcgatc agttccagtt cgaccaggcg cagcaggtag cggggatgat
     1141 cgacgccgtc gcgcgcgcat tcgcgggcga ccttgtcata ctcccgcagt acggtcggca
     1201 gcttcaattg cttgaggtga tgactgagca gcacctgcgg cgtgccactc gtcgttcccg
     1261 ccggcatcgc atcgaggctc ggtttgccgc tcatgcggct ctcccgggca ggagcacggc
     1321 gtaatcggcc gccgatgtcg tcttcacgcg ggtctgcggc agatgcggat aggcggtgag
     1381 atcgagccgc gccgggcggc gctcgatccg ggccagcgcg atctgcttga ccgcatcgaa
     1441 gccgatcgcg ccaagccgga tcgcttcggt gacggcatag gtcaccacct ccttggggat
     1501 cgcctccagc agccgcagca cctggatgaa ctcacgcttg ccacgattgc ccatgcgcgc
     1561 ctccagcaga tgacgcagat gctggaacgt ctcgggcagc tcccaatcct tcaacggcgc
     1621 ggcctgatcg agcgcgttcg gcttggtctc gatcagcgcc aggtagtgca gcggattgaa
     1681 gacgaacacc cccaaaccgt aggagcgctg atgccgggcg atctccgcgc cgccgcacag
     1741 gatgacgacc tgatccacga accccttcac gatgatgtcc tggaagccat aggccgtcgg
     1801 caccgagtaa tcattgccgc gatggcgcac cagcgccgtc gacgagacgc gggcggcccg
     1861 cttctcgcag ggctccagcg gcacggcggg caagtcccgg aacgcgtcaa gatcggcggc
     1921 aagccgcgcg ccgatggtct cggcatgacg accggctcgt tccatttgcc gcgcccggca
     1981 gcgctcagtc agcatggcgt tgagatcgtc gaagctcgcc gccaccggaa tcggcgtcat
     2041 gaagttcgag cgcgcatact tcaccaggcc ctcgaccttg cctttgtcgt tgccctttcc
     2101 gggccgcccg aacctgtcgc tgaacaggta atggctcacc agttcggtga atgcccgcgt
     2161 ccgctcccgt ttgccgtcgc cacagatctt cgccaccgca atcttcagat tgtcgtagag
     2221 caccgacagc ggcaccccgc cgaagaaggc gaaggccgac acgtggccgt ccaggaatgc
     2281 ctccgtcgtc tcggccggat aggccttcac aaagcaggca tccgactgcg gcaggtccat
     2341 gcagaagaag tggagcttac aacgaacgcc gccgatcacg ccgaccgctt cgccaaaatc
     2401 aacttgcgca tgacccggtg gatgcgacag cggcacgaag gtctcgcggc ttcgcgcgcg
     2461 ggcgatccgg acataatcct tcaccaccgt gtagccaccg tcgaacccgt gttcgtcgcg
     2521 cagccgctca aagatccgct tcgccgtgtg ccgctgcttc accggaccag tccggtccgc
     2581 ctccaggatc gcgtcgatca ccggtagcaa agggccaagc ttcggcttcg ccaccggcct
     2641 cgtgcgcgta tagcccggcg gcagcgagaa ccggcacatc ttcaacaccg tctcacggct
     2701 caacccgaat acccgggccg cctcacgacg gctatggccc tcgacgaaaa caaaatgccg
     2761 gacagcggcg tacacttcca cggcaaacat cccgaccgac ccccaaaggg accagcctag
     2821 ccactggacg gcttttacgc cgcccgcgcc gccactatgc cggcgctccg tggcctactt
     2881 tgccaccgcc gtccacaccg cggagcggct caagttct
//
LOCUS       DATCWM010000704         3565 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_259149, whole genome shotgun sequence.
ACCESSION   DATCWM010000704 DATCWM010000000
VERSION     DATCWM010000704.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3565)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3565)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3565
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_259149"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..311)
                     /locus_tag="VIQ50_13885"
     CDS             complement(<1..311)
                     /locus_tag="VIQ50_13885"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEY9361521.1"
                     /translation="MAESVLAAVRVGPSKTEIREYPMPEIPADAALMKMEVAGICGTD
                     VKLYKTPPTKSPVIMGHENIGIIAKAGREFTRRKGFKEGDLVFVEHYVACGKCEWCHL
                     G"
     gene            372..794
                     /locus_tag="VIQ50_13890"
     CDS             372..794
                     /locus_tag="VIQ50_13890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361522.1"
                     /translation="MILTPQALHSRVEWTGEPAGACDGGEGHAVDPKVDAGLGYQMLR
                     PFEKRPEHLQALDRVKEWTRARFKLPEDVPILVSEVACGLPGCPPLETVIAFWTQSDR
                     RHHFKVFKRVEEVVPDDLPPTWMKNALIAFDGDGLECC"
     gene            921..2207
                     /locus_tag="VIQ50_13895"
     CDS             921..2207
                     /locus_tag="VIQ50_13895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007815491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEY9361523.1"
                     /translation="MLRKEQNDLLTQTGPGTPMGRMFRAYWLPALLVEELPENDCPPV
                     RVKMLSERLLAFRDSDGRYGLIDEFCAHRGVSLWFARNEQSGLRCAYHGWKYDVTGQC
                     VEVPSEPRESGFCQKIKLKSYPLVKRGPVLWTYMGPPEKQPPLPEWEFATVPAEQTFI
                     SKRLQECNWLQAMEGGIDSSHVSFLHRGDLGSDPLFKGAKGNEYNLADVQPYFEVVEQ
                     PGGLYIGARRNAENGNYYWRITPWVMPCFTMIPPRGDHPIHGHFWIPIDEENCWAWSY
                     DFHPVRALTRREVDAMREGAGVHCKYVPGTYRPLANKDNDYLIDRAAQKAGATFSGVA
                     GFAIQDASLQESMGPICDRTKENLVSTDNGIIMARHRLLRAAKALVEKDITPPGVDPV
                     HHRVRSASIVLPPEQAFKDAAKEALVTRPGVAQTTV"
     gene            2278..3222
                     /locus_tag="VIQ50_13900"
     CDS             2278..3222
                     /locus_tag="VIQ50_13900"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9361524.1"
                     /translation="MPELKLKTVTRTQGNNRALKDGSVKPRTFAFDFEEVDPLIAAFR
                     RMVRGNEFDICKMAITTYICARAHGKPMTAVPVFLVRAFHHGAIVVNAKSGIRTPKEL
                     EGRKVGVNRGYTVTTGVWARSVLQDEHGVDLSKVTWVLSGDEHVAEYRPPANVVPIDK
                     GKTIANMLASGELAAAIGVEANSPDVKPLIPDALEAGLSALRRRGHYPINHTVVIKDE
                     LIAKHRDLAADVFDAFTRAKRRYVEALEAGKIDKPSEVDEVHRRVMEITGDPLPYGIA
                     PNRNVIEELIRHALTQGIITKPVTADELFAPSTRTLVG"
     gene            complement(3251..>3565)
                     /locus_tag="VIQ50_13905"
     CDS             complement(3251..>3565)
                     /locus_tag="VIQ50_13905"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: protein motif:HMM:NF014593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HEY9361525.1"
                     /translation="PEMTANLVEQAKLLADAGASLLDFTNSGPIAGPAVVRAVAIPVL
                     GGFGGGPWLNGRMRMAHAAIGYAETWIDTKAESYANVAKISLEALSTLIADVRAGRQI
                     KS"
BASE COUNT          650 a         1163 c         1156 g          596 t
ORIGIN      
        1 tggccgagat ggcaccactc gcatttgccg caggcaacat aatgctcgac gaagaccagg
       61 tcgccttcct tgaagccctt gcgccgggtg aattcgcgcc ccgccttggc gatgatgccg
      121 atattctcgt ggcccatgat caccgggctt ttggtcggcg gggtcttgta gagcttgaca
      181 tcggttccgc agatgccggc gacctccatc ttcatcaacg cggcgtcagc cgggatctcc
      241 ggcatcgggt attcgcggat ctcggtcttg ctcggtccca cgcgaaccgc cgccagcacg
      301 ctttccgcca ccgaaactcc tccaatgttc gacgtcgcgg gcaatctagg accagacctg
      361 gaccggtcaa ggtgatttta acgccccagg cgctgcattc gcgcgtcgaa tggacaggcg
      421 agccggcagg tgcttgtgat ggcggggaag gccacgccgt cgacccgaag gtcgacgccg
      481 ggctcggata tcagatgctg cgcccgttcg agaagcgtcc cgaacacctg caagcgctcg
      541 atcgcgtgaa ggagtggaca cgggcgcgct tcaagcttcc cgaagacgtc ccgattctgg
      601 tcagcgaagt tgcctgcggc ctccccgggt gtccgccgct ggagacggtc atcgcgtttt
      661 ggacgcaatc cgaccggcgc caccatttta aagtattcaa gcgggtcgag gaggtcgtcc
      721 ccgacgacct tcctccgacg tggatgaaaa acgcgctcat cgcgttcgac ggcgacggtc
      781 tcgagtgctg ctgaacggcg gtgcggcttg ccgaagcacc cccgaatgcc taggctgaaa
      841 gcgcctggaa cgaagtcccg tgcagcggag cgcgggtccg ttcgtgcgcc gacggccggg
      901 ccgatcacgg acaagaacaa atgctgcgca aggaacagaa cgacctcctg acgcaaaccg
      961 gtcccggcac gcccatgggt cgcatgtttc gtgcctattg gctccccgcg ctgctggtcg
     1021 aggagctgcc ggagaatgat tgcccgccgg tgcgcgtcaa gatgctgtcc gaacggctgc
     1081 ttgccttccg cgacagcgac gggcgatacg gattgatcga cgagttctgc gcccaccgcg
     1141 gcgtgtcgct ttggttcgcc cgcaatgagc agtccggcct gcgctgcgcc tatcacggct
     1201 ggaaatatga cgtgacgggc caatgcgtcg aagtcccctc cgagccacgc gagagcggct
     1261 tctgccagaa gatcaagctc aaatcctacc cgctggtgaa gcgcgggccc gtgctgtgga
     1321 cctatatggg cccgccggag aaacagccgc cgctgccgga atgggaattc gcaacggtgc
     1381 cggcggagca gaccttcatc tccaagcggc tgcaggaatg caattggctg caagcaatgg
     1441 aaggcggcat cgattcgagt cacgtgtcct ttctgcatcg cggcgacctc ggttccgatc
     1501 cgttgttcaa gggcgccaag ggcaacgaat acaatctggc ggacgtgcag ccgtatttcg
     1561 aggtcgtgga gcagccgggc gggctttaca tcggcgcgcg gcgcaacgcc gagaacggca
     1621 attattattg gcgcatcacg ccctgggtta tgccgtgctt caccatgatc ccgccgcggg
     1681 gcgaccatcc gatccacggc cacttctgga ttccgatcga cgaagagaac tgctgggctt
     1741 ggagctacga ctttcacccg gtccgggcgc tcacgcggcg cgaggtcgac gccatgcgcg
     1801 agggagcggg cgtgcactgc aagtacgttc ccggcacgta tcgcccgctc gcaaacaagg
     1861 acaatgacta tctgatcgat cgcgcggcgc agaaggcagg ggcgaccttc agcggtgttg
     1921 ccggtttcgc cattcaggac gcgtcgctgc aggagagcat ggggccgatc tgcgatcgca
     1981 ccaaggagaa cctcgtctcc accgacaacg gcatcatcat ggcgcgccac cgcctgctgc
     2041 gggcggccaa ggcgctggtg gagaaggaca tcacgccgcc cggcgtcgat ccggtgcacc
     2101 accgggtgcg ctcggcttcg atcgtgctcc ccccggagca ggcgttcaag gacgccgcca
     2161 aggaggcgct cgtcacgcgt cccggcgtgg cgcagaccac ggtgtgaaga cggcctgatc
     2221 gaattttccg ccacacgcgc cttgcccacg cgcggcatcg acgacgcacg ctaatccatg
     2281 cccgagctca agctcaaaac cgtcacccgc acccaaggca acaaccgggc gctcaaggac
     2341 ggcagcgtca agccgcggac cttcgcgttc gatttcgagg aggtcgaccc gctcatcgcc
     2401 gcgttccgcc gcatggtgcg ggggaacgag ttcgacatct gcaagatggc gatcaccacc
     2461 tacatctgcg ccagggcgca cggcaagccg atgaccgctg tgccggtgtt cctggtgcgc
     2521 gccttccacc acggcgcgat cgtggtgaac gccaagtcag gcatccgcac gcccaaggag
     2581 ctcgaaggcc gaaaggtcgg cgtgaaccgc ggttacacgg tgaccacggg agtgtgggcg
     2641 cgcagcgttc ttcaggacga gcacggcgtc gacttgagca aggtcacctg ggtgctctcc
     2701 ggcgacgagc acgtggcgga gtaccgcccg cccgccaacg tggtgccgat cgacaagggc
     2761 aagacgatcg ccaacatgct ggcgtccggc gagcttgccg ccgccatcgg cgtcgaggcg
     2821 aactcgccgg acgtaaagcc gctcattccc gatgcgctcg aggcggggct ctcggcgctg
     2881 cgccggcgcg gccactaccc gatcaaccac acggtggtga tcaaggacga gctgatcgcc
     2941 aagcatcgcg atctcgccgc cgacgtcttc gatgccttca cccgcgccaa gcgtcgctat
     3001 gtcgaggcgc tcgaggccgg caagatcgac aagccgagtg aggtcgacga ggtgcaccgg
     3061 cgggtgatgg agatcaccgg cgatccgctc ccttacggga tcgcgccgaa ccgcaatgtc
     3121 atcgaggagt tgatacgcca tgcgctgacg cagggcatca tcacaaaacc ggtgaccgcg
     3181 gacgagctct ttgcgccaag cacgcgcacg ctcgtggggt gatactccgc agctccgtag
     3241 gttggatcga tcagctcttg atctggcggc cggcgcgcac gtcggcgatg agcgtgctca
     3301 gcgcttcgag gctgatcttg gcgacgttgg cgtagctctc ggccttggtg tcgatccaag
     3361 tctcggcgta gccgatggcg gcgtgcgcca tgcgcatgcg gccgttgagc cagggaccgc
     3421 cgccgaagcc gcccagcacc gggatcgcca ccgcgcgcac cactgcgggg ccggcgatcg
     3481 gtcccgaatt ggtgaagtcg aggagggagg cgcccgcgtc ggcgagaagc ttcgcctgct
     3541 ccaccaaatt cgccgtcatc tccgg
//
LOCUS       DATCWM010000705         2069 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_366929, whole genome shotgun sequence.
ACCESSION   DATCWM010000705 DATCWM010000000
VERSION     DATCWM010000705.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2069
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_366929"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..262)
                     /locus_tag="VIQ50_13910"
     CDS             complement(<1..262)
                     /locus_tag="VIQ50_13910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007591752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY9361526.1"
                     /translation="MGEPFIHLAAVQKTYRTRGAPLLAISEATFDVEAGELVSLVGPS
                     GCGKTTLLKVLAGLHPVDSGEVRIGSPTQPFDPSRDIGMVFQQ"
     gene            complement(282..1049)
                     /locus_tag="VIQ50_13915"
     CDS             complement(282..1049)
                     /locus_tag="VIQ50_13915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9361527.1"
                     /translation="MGAHPQALQRYALAVLSHVGLIVAWYLFVKLGEVPKFVMPSPYE
                     TVHALLVPNYRWPENIAVTAIEIFGGYILAVGFGIAAALLFSWFRWLDMAVMPLLVSL
                     NMIPKVALGPLIIVWFKYGIGPNAMMAFAICFFPIVLTTARGLREVEPDLLDLVHTLK
                     GSRWQLFTKIQLPGALPYVFSGMKVAAILAVAGAIVGEFLGSDRGLGYLMLQVQVTLD
                     TAAMFMAVILITLIGMVLYAMVLALERLLVPRDARIS"
     gene            complement(1183..>2069)
                     /locus_tag="VIQ50_13920"
     CDS             complement(1183..>2069)
                     /locus_tag="VIQ50_13920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008144938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HEY9361528.1"
                     /translation="HTTQFAIREACLFEPVLELAMRTAADWSRATAVMIAGLSGRTAQ
                     AVREGQVARELGYHAGLLSLAALEGASEDELIAHAQALAREMPLVGFYLQPAVGGLVL
                     PVSFWRRFAAIENVVAIKIAPFNRYRTLDVIRGVAEADAAERITLYTGNDDHIVLDLV
                     TPFTVVAHGRVRTLRIKGGLLGHWSVWVKRAVELLQRIHASTAANEIPTELLALDAQV
                     TDCNAAIFDAANGFHGVIAGCHEILRRQGLLEGIWCLDPKETLGPGQRQEIDRVCAAY
                     PHLNDDEFVRVNLQRWLS"
BASE COUNT          389 a          649 c          723 g          308 t
ORIGIN      
        1 gctgttgaaa caccatgccg atgtcgcgcg agggatcgaa cggctgcgtc ggcgagccga
       61 tcctgacctc gccggagtcg acggggtgaa ggccggcaag aaccttgagc agcgtcgtct
      121 tgccgcaacc ggacggcccg accagcgaca cgagctcgcc cgcctcgacg tcgaaggtcg
      181 cctcggaaat ggcgagcagc ggcgctccgc gcgtgcggta ggtcttctgc acggcggcga
      241 ggtggatgaa cggttcgccc atgagctccg gccgggaaga gtcaggaaat gcgcgcgtcg
      301 cgcggcacca gcaggcgctc gagcgcaagc accatggcgt agagcaccat gccgatcagc
      361 gtgatcagga tcaccgccat gaacatcgcg gcggtgtcga gcgtgacctg gacctgcagc
      421 atgagatagc cgaggccgcg gtcggagcca aggaactcac cgacgatggc gccggcgacg
      481 gcgagaatgg cggcgacctt catgccggaa aacacgtaag gaagcgcgcc gggcagctgg
      541 atcttggtga aaagctgcca gcgcgagccc ttgagggtgt gcacgaggtc gagcagatcg
      601 ggctccacct cgcgcaagcc ccgcgccgtg gtgaggacga tgggaaagaa gcagatggcg
      661 aacgccatca tcgcgttggg tccgatgccg tacttgaacc agacgatgat cagcgggcca
      721 agcgccactt tggggatcat gttgaggctg acgagtagcg gcatcactgc catgtccagc
      781 cagcggaacc aggagaacaa gagcgccgcg gcgatgccga agccgaccgc gagaatatag
      841 ccgccgaaga tctcgatggc cgtcaccgcg atgttttccg gccagcggta gttggggacg
      901 agcagcgcgt gcaccgtctc gtacggcgag ggcatgacga atttgggcac ctcgccgagc
      961 ttgacgaaca aataccacgc aacgatgagc ccgacgtggc tcagcaccgc cagcgcatag
     1021 cgctgcagcg cctgtggatg tgctcccaac gcgtgcctcc ctcggctttc actgcttcgc
     1081 cggcatcgta gggcaagcgg gtgttcggag ccagttgagg cgggcgacga cgcttcgctg
     1141 cgggttgatg gcggcggaag cggcggttcg cgaccgttca actcaggaga gccatcgctg
     1201 cagattcacg cgcacgaact catcgtcgtt gaggtgcggg taggcggcgc agacgcggtc
     1261 gatctcttgc cgctgtccgg gtcccagtgt ctccttcgga tcgaggcacc agatgccttc
     1321 gagcaacccc tgccggcgca ggatctcgtg gcagccggca atcacgccgt ggaaaccgtt
     1381 cgcggcatcg aagatcgccg cattgcagtc ggtgacctgc gcgtcgagcg ccaaaagctc
     1441 ggtgggaatc tcgttggcgg cagtggaggc gtgaatgcgt tgcagcagtt cgaccgcgcg
     1501 cttgacccac acgctccaat ggccgagcag cccgcctttg atgcgcaggg tgcgcacacg
     1561 cccgtgtgcg accacggtga agggcgtgac gaggtcgagg acgatgtgat cgtcgttgcc
     1621 ggtatagagc gtgatgcgct cggcggcatc cgcctcggcg acgccgcgga tcacgtcgag
     1681 cgtccggtag cggttgaacg gcgcgatctt gatagcgaca acgttctcga tcgcggcgaa
     1741 gcggcgccag aacgacaccg gcagcaccag gccgcccacg gcgggctgca ggtagaagcc
     1801 gacgagcggc atttcgcgcg cgagcgcctg cgcgtgcgcg atcagctcgt cctcgctcgc
     1861 gccctcgagc gcggcaagcg acaggagccc cgcgtgatag ccgagctcgc gcgcgacttg
     1921 cccctcgcgc accgcttgcg ccgtgcggcc ggaaagcccc gcaatcatga ccgcagtagc
     1981 gcgcgaccag tcggccgcgg tgcgcatggc gagctcgagc accggctcga acaggcaagc
     2041 ctcccggatt gcgaactggg tggtgtgga
//
LOCUS       DATCWM010000706         2730 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_307511, whole genome shotgun sequence.
ACCESSION   DATCWM010000706 DATCWM010000000
VERSION     DATCWM010000706.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2730
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_307511"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(191..457)
                     /locus_tag="VIQ50_13925"
     CDS             complement(191..457)
                     /locus_tag="VIQ50_13925"
                     /inference="COORDINATES: protein motif:HMM:NF012354.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEY9361529.1"
                     /translation="MQQVHYFLTLCEELSFTRAARRCGISQPSLTSAIGALERELGGA
                     LFQRKPSIALTGLGRIVRPYLDEIVRNASHVREIARSLMPRADA"
     gene            complement(821..2512)
                     /locus_tag="VIQ50_13930"
     CDS             complement(821..2512)
                     /locus_tag="VIQ50_13930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family protein"
                     /protein_id="HEY9361530.1"
                     /translation="MINDLWYKNAVIYCLSVGTYMDSNGDGIGDFTGLMRRLDYLHGL
                     GVTAIWLMPFQVSPHRDDGYDVSDYYGVDPRYGTIGDFVEFTHGAKQRGIRVLIDLVV
                     NHTSNEHPWFKAACKDLNSPYRDWYVWSKKKPPRANRGMVFPGVQKSTWSYDREAKAW
                     YFHRFYDFQPDLNTSHPQVQAEILKIMGFWIQLGVSGFRMDAVPFIIGTKGANVRKPQ
                     EQYDMLRTFREFLQWRQGDCIVLAEANVLPETDMEYFGADGDRMHMMFNFQVNQHLFY
                     ALATADARPLVTAMKATKPRPATAQWGTFLRNHDELDLGRLTERQRQKVFAAFAPKPE
                     MQLYDRGIRRRLAPMLDGDRRRLELAYSLMFTLPGTPVLRYGDELGMGDDLSLPERNC
                     ARTPMQWSNEPHGGFTKCDKPRLPVISGGPYGFEHINAAIQRRHPDSLLNWTERIIRM
                     RKEVPEIGWGDFAVIPMRDPAVLVIRYDWRNNSVLFVHNLDAKPREIAFSVGLEGAQA
                     EHGKLLVNLLSEDHSRADKRGKHRLVIEGYGYRWFRVGGLDYLLRRTETDQPPKE"
BASE COUNT          484 a          853 c          885 g          508 t
ORIGIN      
        1 cgcactattg agtgccgcaa gtcgggtaaa cccgacttgc actattgtgt gccgcaagtc
       61 gggcaaaccc gacttgcggt gccaaacccg gccatgacta tttctagcaa tgaatcgcgg
      121 cgtcgtccgc catgcacgtg cttatatcgc aggcatcgac gtctttctgc gcgccggggt
      181 tgcgattcgg tcaagcatcc gcacgcggca tcaagctgcg tgcaatctcg cggacgtgac
      241 tcgcgttgcg cacgatttcg tcgaggtagg ggcgcacgat gcgcccgagc cccgtcaacg
      301 cgatcgacgg cttgcgctga aacagcgcgc cgcccagctc ccgctccagc gcgccgatgg
      361 cactggtcag cgagggttgc gagatgccgc agcggcgggc ggcgcgggtg aaactgagtt
      421 cctcgcacag cgtcaggaag taatgcacct gctgcatttg cactggattg ccctcccgtt
      481 cagcccgacc atcgcgggag tggcgttgat cgggggaatg ctccagggtt gaggctgtca
      541 caggccgacg gggcggtctt tgggctggtt ctgaattgtt ctgaaatctg ctaagtagcc
      601 gtcgggaaaa gcaaaatccg gtctcctcag tgctccctat ttaggccttg cgccccctca
      661 tgctgagcac ggctgcatcc acagcttcgg tctgcggtgc gtctcgaagc atgagggcga
      721 atagggtggc tcgtcctcat ccttcgaaat gcgcgcacgc ctgtccgact tagcggcacc
      781 atctcgcctg cgcgctcctc aggatgagga cgagttcccg ctactctttc ggcggctgat
      841 cggtctcggt gcggcgcagc agataatcca atccgccgac gcgaaaccag cggtagccat
      901 agccctcgat gaccagccga tgcttgccgc gcttgtcggc gcggctgtgg tcctcgctca
      961 agagattgac caggagcttg ccgtgctcgg cttgcgctcc ctcgagcccc acggaaaacg
     1021 cgatctccct cggcttggcg tcgaggttgt gcacgaacag caccgaattg ttgcgccaat
     1081 catagcggat cacgagcacc gccggatcgc gcattgggat gaccgcgaag tcaccccagc
     1141 cgatctcggg gacttccttg cgcatgcgga tgatgcgctc ggtccagttg agcagcgagt
     1201 ccggatgccg ccgctggatc gcggcgttga tgtgctcgaa cccgtacgga ccgccggaga
     1261 tgacgggcag gcgtggcttg tcgcacttgg taaagccgcc gtgcggctcg ttcgaccact
     1321 gcatgggcgt gcgcgcgcag ttgcgctcgg gaaggctgag atcgtcgccc atgccgagct
     1381 cgtcgccata gcgcagcacc ggcgtgccgg gaagcgtgaa catcaggcta taggcgagct
     1441 ccaaccgccg gcgatcgccg tccagcatgg gagcgagccg gcggcgaatg ccgcgatcat
     1501 aaagctgcat ctcgggcttc ggcgcgaagg cggcaaatac cttctgccgc tgccgctcgg
     1561 tcagccggcc gagatcgagc tcgtcgtgat tgcgcaggaa cgtgccccat tgcgcggtgg
     1621 ccgggcgcgg cttggtcgcc ttcatcgctg tgaccaacgg ccgcgcgtcc gcggttgcca
     1681 gcgcatagaa caggtgctgg ttgacctgga aattgaacat catgtgcatg cggtcgccat
     1741 ccgcgccgaa atactccata tcggtctcgg gcagcacgtt ggcttcggcg agcacgatgc
     1801 agtcgccctg gcgccactgc aggaactcgc ggaaggtgcg cagcatgtcg tactgctctt
     1861 gcggtttgcg gacgttcgcg cccttggtgc cgatgatgaa cggcacggcg tccatgcgaa
     1921 agccggagac gccgagctgg atccagaagc ccatgatctt gaggatctcc gcctgcacct
     1981 gcggatgcga cgtgttgagg tcgggctgaa aatcgtagaa gcggtggaag taccaggcct
     2041 tcgcttcccg gtcgtagctc caggtcgact tctgcacgcc aggaaacacc ataccgcgat
     2101 ttgcgcgcgg cggcttcttc ttcgaccaga cgtaccagtc gcggtacggc gagttgaggt
     2161 ccttgcacgc cgccttgaac cagggatgct cgttcgaggt gtggttgacg acgagatcga
     2221 tgagcacgcg gatgccgcgc tgcttggcgc cgtgggtgaa ctcgacgaaa tcgccgatgg
     2281 tgccgtagcg cggatcgacg ccgtagtagt cggacacgtc gtagccgtcg tcacgatggg
     2341 gtgagacctg gaacggcatc agccagatgg cggtgacgcc gagaccgtgc aggtaatcga
     2401 gacggcgcat caagccggtg aagtcgccga tgccgtcgcc gttggaatcc atgtaggttc
     2461 cgacggaaag gcagtagatc accgcgttct tgtaccagag atcgttgatc atccgtgcgc
     2521 gcgatcgcgg gagcgaccgt ccggccccta cgccatttca acgctttagc agtcagcaag
     2581 tcgggcaaac ccgacttgcg gtgacaagcc cggccatgac gccaggacgt agcgcggaca
     2641 acgccgccgc agcagcacgc ttgtctcaca cgcgcgggcg gccccaatgc ggcagcccgt
     2701 gcggctcctc gccgtcgcgc acgcgtccgc
//
LOCUS       DATCWM010000707         2098 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_97092, whole genome shotgun sequence.
ACCESSION   DATCWM010000707 DATCWM010000000
VERSION     DATCWM010000707.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2098
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97092"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..548
                     /locus_tag="VIQ50_13935"
     CDS             <1..548
                     /locus_tag="VIQ50_13935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007198608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9361531.1"
                     /translation="EQHGAARILINCAGVGPARRIVGRDGPMPLAEFERVIKINLIGT
                     FNMMRLVAADMQGLSPLADGERGVIIMTASVAAFEGQIGQAAYSASKGGVAALTLPAA
                     REFAQFGIRVNAIAPGIFHTPMLLALPQEAQQSLAAAVPFPKLLGRPDQFATLARHII
                     ENTYINGEVIRLDGALRLAPR"
     gene            563..982
                     /locus_tag="VIQ50_13940"
     CDS             563..982
                     /locus_tag="VIQ50_13940"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008840092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEY9361532.1"
                     /translation="MLVNYRVVRIEWGDCDPAGIIYYPRYFEIFDASTAALIERALGM
                     RKRDYLKAYDFAGHPLVNAQSRFLIPTRFGDEVTVETAVTALRRSSFDVRHRVYKDGA
                     LAAEGLETRVWVQGDAAKGTMQAKPMPQAVIERLSQK"
     gene            complement(1014..>2098)
                     /locus_tag="VIQ50_13945"
     CDS             complement(1014..>2098)
                     /locus_tag="VIQ50_13945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361533.1"
                     /translation="RYEFLRQEHMIRANMAEPMRRQVPRALAWALDHLVSGALLRVLR
                     TSWQFGLVLVYFQMMLIWWIVLSLAGGALAAYVAVRYGFPIAAALPLGIACAFAVFAV
                     LRPLADRWFVVQINSHWPHLCAFARGEPTCFDPPIESCAQRLVAAARAGEADEIIVVG
                     HSGGCALAPAVVARALELDGDVGRRGAPLVLLTLGSMAPGAALHPKAVRLRALAAGLA
                     AEPSIVWIDCQSRADVMNFWDFDPVEGIGARAGAARCNPRIWMVRFRDLLSPEFFRRI
                     RFHFFRLHYQFIMANDRRARYDYFMLLTGPIPVATWARQDYEAMMAFDSDASLVVDRL
                     PCSDAQETRTTDYRRPTSAGSNFAAS"
BASE COUNT          391 a          715 c          693 g          299 t
ORIGIN      
        1 gcgagcagca cggcgcggcc cgcatcttga tcaattgcgc cggcgtcgga cccgccaggc
       61 gcatcgtcgg tcgcgacggg ccgatgccgc tcgccgagtt cgagcgcgtc atcaagatca
      121 acctcatcgg caccttcaat atgatgcggc ttgttgccgc cgacatgcag ggcttaagcc
      181 cgctcgccga cggcgagcgc ggcgtcatca tcatgaccgc ctcggttgcc gcgttcgaag
      241 gacagatcgg gcaagcggcc tattccgcct ccaagggcgg cgtcgccgcg ctgaccttgc
      301 cggcggcgcg ggagttcgcg cagttcggca tccgcgtcaa cgccatcgcg ccgggcattt
      361 ttcacacgcc gatgctgctc gcgttgccgc aggaagcgca gcagagcctc gccgcggcgg
      421 tgccgtttcc caagctgctc ggacgccccg atcaattcgc cacgctcgcc cgccatatca
      481 tcgagaacac ctacatcaac ggcgaggtga tccgcctcga cggcgcgctg cggcttgcgc
      541 cgcgctgagc gaacgggggc gcatgctcgt caattaccgc gtcgtgcgca tcgagtgggg
      601 cgattgcgac cccgccggca tcatctatta cccccgctac ttcgagatct tcgacgccag
      661 caccgcggcg ctcatcgagc gcgcgctggg tatgcgcaag cgcgattacc tcaaagccta
      721 cgacttcgcc gggcatccgc tggtcaacgc ccagtcgcgt tttctgatcc ctactcgctt
      781 cggcgacgag gtgacggtcg agacggcggt cacggcgctg cgccgatcga gcttcgacgt
      841 gcgccaccgc gtttataagg acggtgcgct cgcagccgaa ggcctcgaga cgcgggtgtg
      901 ggtgcaaggc gatgccgcca agggcacgat gcaggccaaa ccgatgccgc aagcggtgat
      961 cgagcgcctg tcgcagaagt aggccatcgc tgcagggcgg gccgagagcg tcgtcacgat
     1021 gccgcgaaat tcgagccggc gctggtgggc cggcggtagt cggtcgtgcg cgtctcctgt
     1081 gcgtcggagc aaggcagacg atccacgacc agactggcat cgctgtcgaa cgccatcatc
     1141 gcctcgtagt cctgtcgcgc ccaagtcgcg accgggatcg ggccggtgag caacatgaag
     1201 tagtcgtacc gggcgcgacg gtcgttcgcc atgatgaact gatagtgcaa ccggaagaag
     1261 tggaagcgaa ttcggcggaa gaattcaggc gagagcagat cgcggaagcg caccatccag
     1321 atgcggggat tgcagcgcgc cgcgccggcc cgagcgccga tcccttccac cggatcgaag
     1381 tcccaaaaat tcatcacgtc ggcacgcgat tggcagtcga tccaaacaat ggacggttcg
     1441 gcggcaagcc ccgcggcaag cgcgcgcagc cgcaccgctt tgggatgcaa cgccgctccc
     1501 ggcgccatgg agccgagcgt cagcaacacg agcggcgctc cgcgccggcc gacatcccca
     1561 tcaagctcga gcgcgcgagc cacgaccgcc ggcgccagcg cgcatccacc gctatggccg
     1621 acgacgatga tctcgtccgc ctctccggcg cgggcggccg caacgagacg ctgcgcgcag
     1681 ctctcgatcg gcgggtcgaa gcaagtcggc tcgccgcgcg cgaaggcgca caaatgcggc
     1741 caatggctgt tgatctgcac cacgaaccag cggtcagcga gagggcgcag cacggcgaag
     1801 accgcaaacg cgcacgcaat gccgagcgga agggccgccg ctatgggaaa gccgtatcgc
     1861 accgcgacgt aggcggcgag cgcgccaccg gccagcgaca acacgatcca ccagatcagc
     1921 atcatctgga aatagaccag cacgaggccg aactgccacg aggtgcgcag cacgcgcagg
     1981 agcgcgccgc taacgaggtg atcgagcgcc caggcgagcg cacgcggcac ctgccgccgc
     2041 atcggctcgg ccatgttggc gcggatcatg tgctcctggc gaaggaactc gtagcgag
//
LOCUS       DATCWM010000708         4576 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_496599, whole genome shotgun sequence.
ACCESSION   DATCWM010000708 DATCWM010000000
VERSION     DATCWM010000708.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4576
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_496599"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..487
                     /locus_tag="VIQ50_13950"
     CDS             <1..487
                     /locus_tag="VIQ50_13950"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY9361534.1"
                     /translation="PPQASYCNGTHVAEVEVDPFTGAVKLLRYTVAHDSGNIINPLIV
                     DGQVQGGVAHGIGNALFEWMKYDHRAQPLTATFQDYLLPAALDVPACDIEHVETPNPL
                     NPLGVKGAGEGGTIPAPAAIISAVEDALSPFGVHFATMPLTPDAIVNALRMAGAYDNL
                     A"
     gene            598..2394
                     /locus_tag="VIQ50_13955"
     CDS             598..2394
                     /locus_tag="VIQ50_13955"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IlvD/Edd family dehydratase"
                     /protein_id="HEY9361535.1"
                     /translation="MSSNGKEPRLRSQLWFENPDNPGMTALYLERYLNFGLTKHELTS
                     GKPIIGIAQTGSDLSPCNRHHLDLAKRVREGIRDAGGIAFEFPMHPMQETGKRPTAAL
                     DRNLAYLGLVEVLFGYPLDGVVLTTGCDKTTPAAIMAAATVNTPAIVLSGGPMLDGWW
                     KGERAGSGTVVWWARQEHAAGRMDYKEFLDLVASSAPSIGHCNTMGTASTMNALAEAL
                     GLSLPGCAAIPAPYRERAQIAYETGRRAVEIVREDLKPSDILTRQAFENAIVACSAIG
                     GSSNAPIHINAIARHVGVALAIEDWETIGYEIPLLVNMQPAGKYLSEEYYRAGGLPAV
                     LNELIAAGRLHADAPTINGKTLGENVTQTKIADADVIRPYDKPLKQHGGFKVLSGNLF
                     ESAIMKTSVISEEFRQRYLSNPNDPNAFEGRAVVFDGPEDYHRRIEDPSLQIDANTML
                     FMRGAGPIGYPGSAEVVNMQPPAALIKRGITSLPCIGDGRQSGTSASPSIINASPEAA
                     VGGGLALLRTGDLVRIDLNKGTANMLVSEAELAQRRIALEKQSGYQCPPNQTPWQEIQ
                     RGMVDQLAAGMVLKPAVKYHRIAQMSVPRDNH"
     gene            2515..3273
                     /locus_tag="VIQ50_13960"
     CDS             2515..3273
                     /locus_tag="VIQ50_13960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY9361536.1"
                     /translation="MALRLQDKLALVTAAGQGIGRAIAEAFVAEGAQVIATDVDDKKL
                     EGMKSLKRHKLDVRSTESVEALANGIGTELGGLDVLVNCAGYVHHGSVLDCSEHDWDF
                     SFDLNVKSMHRTIKAFVPGMLGKKAGSIVNISSAVSSIHGVPDRYVYGATKAAVIGLT
                     KAVAADFIRQGIRANAICPGTIESPSLEERIKERSRATGRSLAEVEKAFVDRQPMGRL
                     GRPEEVAALAVFLASDEASYITGQAHLVDGGMAL"
     gene            3513..4277
                     /gene="otsB"
                     /locus_tag="VIQ50_13965"
     CDS             3513..4277
                     /gene="otsB"
                     /locus_tag="VIQ50_13965"
                     /EC_number="3.1.3.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012030403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004805 - trehalose-phosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-phosphatase"
                     /protein_id="HEY9361537.1"
                     /translation="MSNPILSLPTALDQFAILLDVDGTILDIAPTPREVFVSHALRDT
                     LRRLWERTQGAVAFVSGRPVNELDLIFAPLQLPAIGGHGAELRTVAGAAAGAPRLAPL
                     DSRLKQRFAAIAEAGPGIVLEDKGYSLALHYRLAPDKETLVRAAAAKIYSDLKNASIE
                     LLPGKLVVEVKQVGVTKAIAVRELMTYPPFAGRRPIFMGDDVTDLGVFEILPDFEGIG
                     ISVGRDVPGVAACFDRPADVRRWLEQISRNDAFATP"
     gene            4274..>4576
                     /locus_tag="VIQ50_13970"
     CDS             4274..>4576
                     /locus_tag="VIQ50_13970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011316193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trehalase-like domain-containing protein"
                     /protein_id="HEY9361538.1"
                     /translation="MTDHGLDLAVIGNGRTAALVNPTARLVWWCYPRFDRDPIFCRLL
                     SGDEEKGFSDIVLDDMADFQSEYLRNTAVVSTVLTDRQGGAVRITDFAPRFRQFGRV"
BASE COUNT          872 a         1451 c         1407 g          846 t
ORIGIN      
        1 cccgccgcaa gcttcgtatt gcaacgggac gcacgtggcg gaggtcgaag tcgacccttt
       61 caccggcgcg gtgaaacttc tgcgctacac ggtcgcccac gacagcggaa atatcatcaa
      121 tccgctgatc gtcgacggcc aagtgcaagg aggcgtcgcc cacgggattg gcaacgcgtt
      181 gttcgaatgg atgaagtacg atcaccgcgc gcagccgctg acggcgacgt ttcaggacta
      241 tctcttgccg gcggcgcttg acgtgccggc ctgcgacatc gagcacgtgg agacgccgaa
      301 tccgctcaat ccgctcggcg tcaaaggcgc cggcgagggc ggcaccattc ccgcgccggc
      361 cgcgatcatc tcggcggttg aagatgccct ctcacccttt ggcgtgcatt ttgccaccat
      421 gccgctgacg cctgatgcca ttgtcaacgc gctgcgcatg gctggcgcct acgacaactt
      481 ggcgtgagga gcggtttggc gttcggctgc gcggattgcc gtgcagcgtc gtcgcctagg
      541 gtgttcctgc gcgatcatcc tatatacatc ggaagtcgtt gaactttgga ggactcgatg
      601 tcgagcaatg gaaaggaacc ccgcctgcgc tcgcaattgt ggttcgaaaa ccccgacaac
      661 cccggcatga cggcgcttta tctcgagcga taccttaatt tcggcttgac caaacacgag
      721 ctcacatccg gcaagccgat catcggcatt gcgcaaaccg gttccgacct ctcgccctgc
      781 aaccgccatc atttggacct cgccaagcgc gtccgcgagg gcatccgcga tgccggcggc
      841 atcgccttcg agtttcccat gcatccgatg caggaaaccg gcaaacggcc gaccgccgca
      901 ctcgaccgca atctcgccta tctcggtctg gtcgaagtgc tgttcggcta cccgctcgac
      961 ggtgtcgtgc tcacaaccgg ctgcgacaag accacgccag cggcgatcat ggcggcggca
     1021 accgtgaata cgccggcgat cgtgctctcc ggcgggccga tgctcgacgg ctggtggaag
     1081 ggtgagcgcg cggggtcggg cacggtggtg tggtgggcgc gccaggagca tgctgccggc
     1141 cgcatggact acaaagaatt cctagatctt gtcgcgtcct cggccccgtc gattggtcac
     1201 tgcaatacca tgggcaccgc ctcgaccatg aacgcgctcg ccgaggcgct tgggctttcg
     1261 ctccccggct gcgccgccat ccctgcaccg taccgcgagc gcgcgcaaat cgcgtacgaa
     1321 accggccgac gcgctgtcga gatcgtgcgt gaggatctca aaccgtccga catacttacc
     1381 cgccaagcgt tcgagaacgc cattgtcgcg tgctcggcga tcggtggctc gagcaacgcg
     1441 ccgatccaca tcaacgccat cgcccgccac gtcggggtag cgctcgcgat cgaggattgg
     1501 gaaacgatcg gctacgagat accgttgctc gtcaacatgc agcccgccgg caaatatctc
     1561 agcgaggaat attaccgcgc cggcggattg ccggcagtgc tcaatgaatt gatcgccgcc
     1621 ggccgcctcc atgccgatgc gccgacgatc aacggcaaga ctctcgggga gaacgtgacg
     1681 cagaccaaga tcgcggacgc cgacgtgatc cgtccctacg acaaaccgct caaacagcat
     1741 ggcggcttca aggtgctgtc gggaaatctg ttcgagtcgg caatcatgaa aacgagcgtg
     1801 atctccgaag agttcaggca gcgctacctg tccaacccca acgatcccaa cgcgtttgaa
     1861 ggccgtgccg tcgtgttcga tggaccggag gactaccacc gccgcatcga ggacccgtcg
     1921 ctgcaaatcg acgcgaacac gatgctgttc atgcgcggcg ccggccccat cggctatccg
     1981 ggctcggcgg aggtcgtaaa catgcagccg ccggcggcgc tgatcaaacg cgggataaca
     2041 tctctgccct gcattgggga cggccgtcag tcggggacgt cggcctcccc ttcgatcatc
     2101 aatgcttcgc ccgaggcggc ggtgggcggc gggctcgctt tgctccgaac cggcgatctg
     2161 gtgcggatcg acctcaataa gggcaccgcg aacatgttgg tgtcggaagc cgaactcgcg
     2221 cagcgccgca tcgcgttgga gaaacagagt ggatatcaat gtccgccgaa ccagacgccg
     2281 tggcaggaga tacagcgtgg catggtcgac cagctcgccg ccggcatggt gctcaaacct
     2341 gcggtgaaat atcatcgcat cgcgcaaatg agcgtgccgc gggacaacca ctgatttgcc
     2401 ggcacgagcc atggccgaat agcacatgcc tgaccggcgg gccggcttcg gcagcgcata
     2461 tgaaccaaat cgcctgaaac gacgttagcg cagcacggca cggagacacc gaccatggct
     2521 ttacgtctgc aagacaagct cgcgctcgtc accgcggcgg gacaaggcat cggacgcgct
     2581 atcgccgaag cgtttgtggc cgaaggggcg caggtgatcg ccaccgatgt ggacgacaag
     2641 aaactcgaag ggatgaaaag cctaaagcgt cacaagctcg acgtgcgctc gaccgagtcg
     2701 gtagaggcgc tggcgaacgg catcggcacc gaacttggcg gcctcgacgt gctcgtaaac
     2761 tgtgccgggt acgtgcatca tggcagcgtt ctcgactgct cggagcatga ctgggacttc
     2821 tcgttcgatc ttaacgtgaa atcgatgcat cggacgatca aggcgtttgt gcccggcatg
     2881 ctgggaaaga aggcgggctc gatcgtcaat atttcatccg cggtttcgtc gatccacggg
     2941 gtgcctgatc gttatgtcta cggcgccaca aaagccgccg tcataggact gaccaaggcg
     3001 gttgcagcgg actttattcg tcaaggcatc cgcgcgaacg ccatctgtcc cggcacgatc
     3061 gaatccccct cgctggagga gcgaatcaaa gaacgctcgc gcgcgaccgg tagatccctc
     3121 gccgaggtgg aaaaggcatt cgtggaccga caaccgatgg gccgattggg tcgccccgag
     3181 gaggtcgcgg cgctcgccgt tttcctcgcc tcggacgagg caagctacat cactggacaa
     3241 gcacatttgg tcgacggtgg gatggcgctc taggggtcgc ggcgcttata tacgagccag
     3301 aggaaacgtt cggggtcggt ctaagctgac acaggtcgga gaccgcctat gaaacgggca
     3361 agtgcgcagg tatgtctttt tgtctggaac aattgcggaa tcaatgagtt gctggacagt
     3421 tcggactaac gtacccgcat caggcgcgtg atcgctccgc aatctgcatg cgccgagcat
     3481 gcacccctcc tgcacgattg tcggacaagg tgatgtcaaa tcctattctg tcgctcccca
     3541 ccgcgctcga ccaatttgcc atcctgctcg acgtggacgg aacgattctc gacatcgccc
     3601 ctactccgcg cgaagtgttc gtgtcgcacg ccttgcgcga tacgctgcgg cggctgtggg
     3661 agcgcaccca aggcgctgtc gcttttgtga gcggccgacc ggtgaacgag ctcgatctca
     3721 tcttcgctcc tctgcagttg ccggcgatcg gcggccacgg cgccgagctc cgcaccgtcg
     3781 ccggtgccgc agccggagca ccgcggctcg ctccactcga ttcgcgcctg aagcagcggt
     3841 ttgccgccat tgcggaggcc ggccccggca tcgtgctcga ggacaagggc tactcgcttg
     3901 cgctgcatta ccgcttggca cccgacaagg agacgcttgt gcgcgcggcc gcggccaaaa
     3961 tttactccga cctgaagaac gcttcgattg agctcttacc gggcaagctc gtggtagagg
     4021 tcaagcaagt tggtgttacc aaggcaattg ccgttcgcga attgatgacc tacccgcctt
     4081 tcgccggccg acgtcctatt ttcatgggcg acgatgtgac ggatctcggc gtgttcgaga
     4141 tcctgccgga tttcgagggc atcggcattt cggttggccg ggacgtcccg ggcgtcgcag
     4201 cctgctttga tcggccggcg gacgtccgcc gctggctcga gcaaatctct cgcaacgacg
     4261 cattcgcgac gccatgaccg atcacgggct tgatcttgcc gtcatcggca acggtcgcac
     4321 cgccgcgctt gtgaatccca cggcgcgcct ggtgtggtgg tgctaccctc gcttcgatcg
     4381 cgacccgatc ttctgtcgtc tgctttccgg cgacgaggag aagggatttt ccgacatcgt
     4441 gctcgatgac atggccgact tccaatcgga atacctccgc aacaccgcgg tggtgtcgac
     4501 ggttcttacc gaccggcaag gcggcgccgt ccgcatcacc gatttcgccc cgcgctttcg
     4561 ccaattcggc cgggtg
//
LOCUS       DATCWM010000709         2525 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_296904, whole genome shotgun sequence.
ACCESSION   DATCWM010000709 DATCWM010000000
VERSION     DATCWM010000709.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2525
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_296904"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1250
                     /locus_tag="VIQ50_13975"
     CDS             <1..1250
                     /locus_tag="VIQ50_13975"
                     /EC_number="1.11.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HEY9361539.1"
                     /translation="AAAAERADDLAALKASFRRPASVPFPADNPFSEAKRALGETLFN
                     DPRLSIDGSLACVSCHQRGKGFADGKAQGRGVPGRALKRHTPSLWNLAWASAVFWDGR
                     ARTLEEQVAGPIESPDEMAQPMAALVARLAADPEMVRAFTQAFPESPQVNGVNLAKAI
                     ATYERTFVSPETRFDRWIAGDEHALTPREVAGFRLFTGKAGCIKCHSGFAFTDYAFYD
                     IGLPGEDRGRGAVLRLEAAEHAFKTPGLREIARSAPYMHDGSLATLEDVLRHYVGGVL
                     DRPTLSKDLPRGLKLSEAERADLIAFLGTLTGEGEPELPANIVAVKSGPSGPAQKVST
                     VSQDDKTFYPGHIALVRGERLWIVNNDSRTHNVRIFDPALDFDSGAQEPGETVEIGFP
                     APGSFLVFCGIHPKMELYVDVAP"
     gene            1385..2473
                     /locus_tag="VIQ50_13980"
     CDS             1385..2473
                     /locus_tag="VIQ50_13980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEY9361540.1"
                     /translation="MKRREFLKVGAAGMAASALAAPAVAQSMPEIRWRLTASWPKSLD
                     TLYGACETFAKHVSEATDNKFQIQVFAAGEIVPALQALDAVQNGTVEICHTASYYYVG
                     KDPTWALFCAVPFGLNTRQQNAWFYDGDGMKLMNDFAKKSNVYCLAGGNTGAQMGGWF
                     RKEIKGVEDLSGLKFRIGGWAGKTLQKLGVVPQQIAGGDIYPALEKGTIDAAEWVGPY
                     DDEKLGFHKVAPYYYYPGWWEGGTANHLMINLPKWNELPKTYQGVVAAAAGLANIEET
                     ARYDARNPAALKRLIAAGTQLRPFPQPVMEACLKASNEVNAETSAGNADYKKVLDSMQ
                     AFRNDEYLWWQVAEYTFDTFMIRTRTRA"
BASE COUNT          467 a          808 c          809 g          441 t
ORIGIN      
        1 gagcagcggc agccgagcga gcggatgacc tcgccgcgct caaggcgtcg ttccgtcgcc
       61 ccgcgagcgt gccgtttcca gccgacaatc cgttctcgga agcaaagcgt gcgctgggcg
      121 agacgctctt caatgatccg cgcctgtcga tcgacggcag cctcgcttgc gtgagctgtc
      181 atcagcgcgg caaaggcttc gccgacggca aggcccaggg ccgcggtgtg ccgggccgtg
      241 cgctcaagcg ccatactccg agcttgtgga atctggcctg ggcctcggcc gtgttctggg
      301 acgggcgtgc gcgcaccctg gaggaacagg tcgcgggacc catcgaatcg cccgatgaga
      361 tggcgcagcc gatggctgcg ctagtcgccc gactggccgc cgatcccgag atggtgcggg
      421 ccttcacgca ggcctttccc gaatcgccac aggtcaacgg cgtaaatctc gccaaggcca
      481 tcgctaccta cgagcggacc ttcgtgtcac ccgagactcg tttcgaccgt tggatcgccg
      541 gcgacgagca cgcgttgacg ccgcgcgagg tcgcgggatt caggctgttc accggcaagg
      601 ccggctgcat caagtgccac agtggattcg ccttcaccga ttatgcgttc tacgacattg
      661 gtctgccggg cgaggatcgc ggccggggag cggtgctgcg gcttgaggcg gccgagcacg
      721 cattcaagac gccggggctg cgcgagattg cccgctcggc tccctatatg catgacggct
      781 ccctcgccac gctggaggac gtgctccgcc actacgtcgg cggggtgctg gatcgcccca
      841 cgctgtccaa ggatctccct cgcgggctca agctgtcgga agcggagcgc gcggatctaa
      901 tcgcgtttct cggcacgttg acgggcgaag gcgagccgga attgccggcg aacatcgtgg
      961 cggtgaaaag cggcccctcc gggccggcgc aaaaggtcag cacggtgtct caggacgaca
     1021 agacgtttta tcccggccat atcgcactgg tccgcggcga gcgattgtgg atcgtcaaca
     1081 acgacagccg cacccacaac gtgcggatat tcgatcccgc gctcgacttc gattccgggg
     1141 cgcaggagcc cggcgagacg gtggaaatcg gcttccccgc ccccggttcc ttcctggtgt
     1201 tctgcggcat ccatccgaag atggagctct acgtcgatgt cgcaccctga gcgagggatg
     1261 tcgcgggttt tcccccttgc gcacgcggcg gggagcggcc tatctaccgc aaatttgtgg
     1321 atccaccacg ccccaacggg tcgcatctcg acccaggatc cctggatcag gaggaaacat
     1381 ccccatgaaa cgccgcgaat ttctcaaggt tggtgcagcc ggaatggctg cctcggcgct
     1441 ggccgcgccg gccgttgcgc agtcgatgcc ggaaatcaga tggcggctga cggcaagctg
     1501 gccgaagtcg ctcgacacgc tctatggggc ttgcgaaacc ttcgccaagc acgtgtcgga
     1561 ggcgaccgac aacaaatttc aaattcaagt cttcgccgcg ggcgagatcg tccctgcttt
     1621 gcaggccctc gacgccgtcc aaaacggcac cgtcgaaatc tgccacaccg cctcctacta
     1681 ttacgtcggc aaggatccaa cgtgggcgct gttctgtgcc gtcccgttcg gcctcaacac
     1741 ccgccagcag aatgcctggt tctacgatgg cgacggcatg aaactcatga acgacttcgc
     1801 caagaagtct aatgtctact gccttgctgg cggcaacacc ggcgcgcaga tgggtggatg
     1861 gtttcgcaag gagatcaagg gcgtcgagga tctctcgggc ctcaaattcc gcatcggcgg
     1921 ctgggccggc aagacgctgc agaagctagg cgtggtgccg cagcaaatcg ccggcggcga
     1981 catctatccg gcgttggaaa aaggcaccat cgacgccgcc gaatgggtcg gcccttacga
     2041 tgacgagaag ctcggtttcc ataaggtcgc gccgtactat tactatcccg gttggtggga
     2101 aggcggcacc gcgaaccacc tcatgatcaa cttgccgaag tggaacgagc tgccgaagac
     2161 ctatcagggg gtcgtcgccg cggccgcggg tttggccaat atcgaggaaa ccgccaggta
     2221 tgacgctcgc aatccggcgg cgctcaagcg cctcatcgcc gctggcacgc agttgcgtcc
     2281 gttcccgcag ccggtcatgg aggcatgcct gaaggcatcg aacgaggtca atgccgagac
     2341 gtcggcggga aatgccgact acaagaaggt cttggattcg atgcaggctt tccgcaacga
     2401 cgagtatctg tggtggcagg ttgcggaata caccttcgat accttcatga tccgcacccg
     2461 gacccgggca taacggcgag cctgcgtgag cggcggcccg cgcttgagct gccgcccacc
     2521 gccga
//
LOCUS       DATCWM010000710         4466 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_188849, whole genome shotgun sequence.
ACCESSION   DATCWM010000710 DATCWM010000000
VERSION     DATCWM010000710.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4466)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4466)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4466
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188849"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            142..1095
                     /gene="htpX"
                     /locus_tag="VIQ50_13985"
     CDS             142..1095
                     /gene="htpX"
                     /locus_tag="VIQ50_13985"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016839747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metalloprotease HtpX"
                     /protein_id="HEY9361541.1"
                     /translation="MNYLRTAILLAGLTALFMGVGYLIGGGSGALIALLVAAGMNLAS
                     YWNADKLVLAMHEAHEVNETTAPDLVQLVAELARRAGLPMPRVYMMDNPQPNAFATGR
                     NPEHAAVAVTSGLLQMLSREEVAGVIAHELAHVKNHDTLTMTITATIAGAISMLAQFG
                     LFFGGQRDNNSGLGVVGTIIMVILAPIAAMIVQMAISRTREYAADELGARTSGRPDAL
                     ASALAKISAAAEAVPNPTAERTPATAHLFIVNPLTGHGMDNLFSTHPSTENRIAALRH
                     LAAEIGWRGGAAPSAPAYPRRSASPWGNSAGRSEQQRGPWG"
     gene            1142..2470
                     /locus_tag="VIQ50_13990"
     CDS             1142..2470
                     /locus_tag="VIQ50_13990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011155601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEY9361542.1"
                     /translation="MARSDLAVDAPGFAARRIAAEILESVLHRRRPLDNELERRAAMP
                     DFAALAYRDRALVRSLVMSVLRKLGTLRHLLHQWLKLPAGAPRVETALLLGTAQILWL
                     DVADHAAVDLAVRLVQAEHHAVRYAGLVNAVLRRVTREGRHFISTLDMAALDTPQWLL
                     ARWQKTYGAETAHAIAVANAQEPALDLTVKSDPEYWANALGGRVLATGSVRALVHGPI
                     SQLPGYAEGAWWVQDAAAALPAKLLGNGQGLAVADLCAAPGGKTAQLAVAGARVIAVD
                     RAPGRLERLRSNLTRLRLSAETVAAEVTQWQAGPFDAVLLDAPCSSTGTIRRHPDIPW
                     LKRPADIATLAALQRRLAAQAVQLTKPGGVLVYCSCSLEPEEGIEIVRDLLDRTGGLV
                     RRPISADEIYGRSEWITADGDLRTLPCQLPDPDSRMAGLDGFYAARLQRI"
     gene            2527..4338
                     /locus_tag="VIQ50_13995"
     CDS             2527..4338
                     /locus_tag="VIQ50_13995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012493876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heparinase II/III family protein"
                     /protein_id="HEY9361543.1"
                     /translation="MESPARRRVSASMSRVSVAEGTKLSLVLARGLLGRLTSRVAAHP
                     ILNWPFSFGKADRIVIAPQDLRTSDGTRASEIYAGRFAFAGKVVTCDSRSPFEIPAPS
                     EDWAAALFGFGWLRHLRAAESGITRANARALVDEWIALNSSHDAIAWRADVVARRVMS
                     WLSQAPLLLDDADVHFYRRFLRSLSRQVRQLRHTASQARDGVPRLQAAMALSYAALCM
                     ARQQRHIRAATKRLSEELARQILPDGGHISRNPGALIELLVDLLPLRSAFTARNLVPP
                     TALLNAIDRMMPMLRFFRHGDGNFALFNGMGPTPTDLITTILAYDDARGAPLANAPHA
                     GYQRLEGGGTLVLMDAGRPPPMAVSQEAHAGCLSFELSAKQNRIVVNCGLPVASREGW
                     RQVARTTAAHSTVTFNDTSSCRFIEAGPVRRMLNGTPMIAGPRTVAVAREELEAGTLL
                     RASHDGYADIFNVVHERVLMLSADGRRLDGEDSFTPARGELVPAERDQFAVRFHLHPS
                     VKANRLSDGHGAMLAMPNREVWTFTAYGDRVDVEESVYLAGPDGPRRTVQLVIYGRAR
                     NVPRVRWTFAPHATQAAGISGAGSARRGRADEPQLPL"
BASE COUNT          715 a         1565 c         1442 g          744 t
ORIGIN      
        1 atgtgctccc gggcgctccg ggatcaagtc ccgccatgcg gcatgacgga gcaggccctg
       61 gcaagccggc ggcgccgacc caacatttta tgcgacaatg ttgagcctgc ctgcgccaca
      121 aaggccaaat ggggaagcgc catgaactac ttgcgtaccg ccatcctgtt ggcggggctg
      181 accgccctgt tcatgggcgt cggttatttg atcggcggtg ggagcggcgc attgattgcg
      241 ctcctcgttg ccgcgggcat gaacctcgcc agctattgga acgccgacaa gctcgtgctg
      301 gcaatgcacg aggcccatga ggtcaacgag accactgcgc cagacctcgt gcagctcgtc
      361 gcggaactcg cgcggcgcgc cggcctgccc atgccgcgcg tctacatgat ggacaacccg
      421 cagccaaacg cgtttgcgac cggacgcaac ccggagcacg cggcagtcgc ggtgacgagc
      481 gggctgttgc agatgctctc gcgcgaggaa gtggccggcg tgatcgcgca cgagctcgcc
      541 catgtcaaaa atcacgacac gctgaccatg acgatcaccg cgaccatcgc cggcgccatt
      601 tccatgctgg cacagttcgg gctgttcttc ggcggccagc gcgacaacaa cagcggactc
      661 ggcgtggtcg gcaccatcat catggtaatc ctcgctccga tcgcggccat gatcgtgcag
      721 atggcgatca gccggacgcg ggaatacgcg gctgacgaac tcggcgcccg caccagcgga
      781 cgcccggacg cactcgcctc cgcgctggcg aagatttccg ccgctgccga ggccgtgccg
      841 aaccccaccg ccgagcgcac gccggcgacc gcgcatctgt tcatcgtgaa cccgctgacc
      901 ggccacggca tggacaatct gttctcgacc cacccttcga ccgagaaccg cattgctgcg
      961 cttcggcact tggcggcgga aatcggttgg cgcggcggcg cggcgccgag cgctcccgcc
     1021 tatcctcggc gtagcgccag cccgtggggc aattcggctg gccgcagcga acagcaacgt
     1081 ggcccgtggg gttgagatcc tcgggctcgc cgcatcctgc cgtttcgtgg caatgacgga
     1141 catggcccgc agcgacctcg ccgtcgatgc tcccggtttc gccgcgcggc gcatcgctgc
     1201 cgagatcctc gagagcgtac tccatcgccg ccggccgctc gacaatgaac tcgaacgtcg
     1261 ggcggcaatg cccgatttcg ccgcgcttgc gtatcgcgac cgcgccttgg tgcgcagttt
     1321 ggtcatgtcg gtgctgcgta aactcgggac gttgcgccat cttctgcacc aatggctcaa
     1381 gcttcccgcg ggcgcaccgc gcgtcgaaac ggcgttgctc ctcggcacgg cgcaaatcct
     1441 ttggctcgac gtggcagatc acgcggcagt ggacctcgcg gtccggctgg tccaggccga
     1501 gcaccatgcg gtgcgctacg ccggtctcgt caacgccgtg ctgcggcgcg tcacgcgcga
     1561 gggcaggcat ttcatctcga ccctcgacat ggccgcgctc gacaccccgc agtggctgct
     1621 ggcacgctgg caaaaaacct atggagcaga gaccgcgcac gcgatcgccg tcgccaacgc
     1681 gcaggagccg gcgctcgatc tgacggtcaa gagcgacccc gaatattggg caaacgcgct
     1741 cggcgggcgc gtgcttgcga ccggatcggt gcgcgcgctc gtgcatggtc cgatatcgca
     1801 attgccgggc tatgccgagg gagcctggtg ggtacaggac gccgccgcgg cgctcccggc
     1861 gaagcttttg ggaaacgggc aagggcttgc ggtcgcggat ctatgcgccg cgcccggcgg
     1921 caaaaccgcc cagctcgcgg ttgccggcgc ccgcgttatt gccgtcgacc gcgccccggg
     1981 aaggctcgaa cggctccgat caaacctcac gcgcctgcgg ctcagcgcgg aaacggtcgc
     2041 cgccgaagtg acgcagtggc aagccggccc gttcgacgcc gtccttctgg atgcgccctg
     2101 ctcgtcgacg gggaccatcc ggcgccatcc ggatatcccc tggctcaagc gcccggccga
     2161 cattgccacg ctcgcggcgc tgcagcgccg gcttgccgcg caagccgtcc agctgacgaa
     2221 acccggcggc gtgctggttt attgcagctg ctcgctcgag ccggaggaag gcatcgaaat
     2281 cgtgcgcgat ctgctcgatc gcaccggcgg tcttgtccgt cggccgatct cggcggatga
     2341 aatctatggc cgcagcgagt ggatcaccgc cgacggcgac ctgcggacgc tcccgtgtca
     2401 gctgccggac cccgattcgc gcatggccgg cctggatggc ttctacgcgg cccgtctgca
     2461 aaggatttga acgccttatc cttggttggc cgctgcccga cccttcgcta tgttgccgtt
     2521 ccggggatgg aatcgcccgc acggaggaga gttagcgcct cgatgtcgcg cgtttcggtc
     2581 gcggaaggga cgaagttgtc cctggtcctg gcgcgtggcc tccttggcag gctcaccagc
     2641 cgcgttgcgg cgcatccaat cctcaactgg ccgttttcct tcggcaaggc ggaccggatc
     2701 gtcatcgcgc cgcaggacct gcgaaccagc gacggcaccc gcgccagcga aatctacgcc
     2761 ggccgcttcg cgtttgcggg caaggtcgtc acctgcgatt cgcgctcgcc gttcgagatt
     2821 ccggcgccgt ccgaagactg ggcggcggcg ctctttggct tcggctggct gcgtcatctg
     2881 cgcgccgccg aatccgggat cacccgcgcc aacgcacgcg cgctggtcga cgaatggatc
     2941 gctctcaaca gctcgcatga cgccatcgca tggcgcgcag acgtggtcgc gcggcgcgtg
     3001 atgtcgtggc tgagccaggc gccgctgctg ctcgatgatg ccgacgtcca tttctatcga
     3061 cgattcctgc gcagcctgag ccggcaagtc cgccagctcc gacacaccgc ctcgcaagca
     3121 cgcgacggcg tgccgcgact gcaagccgcg atggcattga gctatgcggc gctgtgcatg
     3181 gcacgccagc agcgccacat ccgcgccgcc accaaacgcc tctcggagga gttggcgcgg
     3241 caaatcctgc ctgacggcgg ccacatcagc cgcaaccctg gcgcgttgat cgaattgctg
     3301 gtcgaccttt tgccgctgcg cagcgcgttc accgcccgca acctcgtgcc gccgaccgcg
     3361 ctgctcaatg ccatcgatcg aatgatgccg atgctgcgct tcttccggca cggcgacggc
     3421 aacttcgcgc tgttcaacgg catggggccg actccgaccg acctgatcac caccattctc
     3481 gcctacgacg acgcccgcgg cgcaccgctc gccaacgcac cccacgccgg ctaccagcgt
     3541 ctggagggcg gcggcacgct cgttctgatg gacgccggtc gcccgccacc gatggcggtg
     3601 agccaggaag cccatgccgg ctgcctctcg ttcgagctgt cggccaagca gaaccggatc
     3661 gtggtcaatt gcggattgcc ggtggcgagt cgcgaaggct ggcggcaggt cgcgcgcacg
     3721 acggccgccc actccaccgt cacgttcaac gatacttcct cgtgccgctt catcgaggct
     3781 ggtcccgtta ggcgcatgct caacggcacg cccatgatcg ccggcccgcg caccgtcgcc
     3841 gtcgcacgcg aggagctaga ggccggcacc ttgttgcgcg cgtcccatga cggctacgcc
     3901 gacatcttca atgtcgtgca cgagcgcgtc ctcatgctct cggccgatgg acgcaggctc
     3961 gacggcgagg attcgttcac gccggcacgc ggcgaattgg tgccggcgga gcgcgatcaa
     4021 ttcgcggtgc gtttccacct gcatccgtcg gtcaaagcta accggctgtc cgacgggcac
     4081 ggcgccatgc tggcgatgcc gaaccgggag gtatggacgt tcaccgccta tggcgaccgc
     4141 gtcgacgtcg aggaaagcgt ctatctcgcc ggtccggatg gaccgcgccg caccgtccag
     4201 ctcgtcattt atggccgcgc gcgcaacgtg ccgcgggtgc gttggacgtt cgcaccgcat
     4261 gcgacacaag ccgctggcat ctccggcgct ggcagcgccc gccgcgggcg cgccgacgaa
     4321 ccccagctac cgttgtaagg gcgtcgcgct cagctttgaa tgtggctttc gctgtgatac
     4381 cggctagtgc cccgaacccg aagctcgcac atgtcgttct gcaagggcag ctgcgaactt
     4441 cgggttcaaa aggggcacta gaagca
//
LOCUS       DATCWM010000711         5319 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_285949, whole genome shotgun sequence.
ACCESSION   DATCWM010000711 DATCWM010000000
VERSION     DATCWM010000711.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5319)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5319)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5319
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_285949"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            90..839
                     /locus_tag="VIQ50_14000"
     CDS             90..839
                     /locus_tag="VIQ50_14000"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009026010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEY9361544.1"
                     /translation="MGKLDGKIALVTGGNSGIGLATAKQFVQEGAYVFITGRRKRELS
                     AGIKEIGRNVTGVQGDMSKLADLDRLFAQIKQEKGRLDIVFANAGIAKYAPFGAITEE
                     LYSAIFDVNVKGVLFTVQKALALMPNGASIILNASIVASKGLSSNSVYSATKAAVRSF
                     ARTWTTDLKDRRIRVNAVSPGSIDTPGLNELLASSETGQQRRKMISSAVPLGRFGTPE
                     EIAKAVVFLACDDSSYITGTELFVDGGFAQV"
     gene            878..1207
                     /locus_tag="VIQ50_14005"
     CDS             878..1207
                     /locus_tag="VIQ50_14005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019861801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY9361545.1"
                     /translation="MTSDLPEPLREYFAAANARDPDRVAACFAEDALIRDEGREIRGR
                     GNIRAWAEHTGRIYRYTATVTAVEERSAGVVVTAHLTGDFPGSPIDLRYRFTLAQGRI
                     ARLEIGP"
     gene            1349..1807
                     /locus_tag="VIQ50_14010"
     CDS             1349..1807
                     /locus_tag="VIQ50_14010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361546.1"
                     /translation="MPAKAAVVLAVPLVFAATVAFADTSNRAGYRSPFVAEAMSQSSA
                     DRIAAVRNAVNGNESLAASQSALFKSAFFCRGGLDLTTVWIKLTDPGGNAIHVNLEHI
                     TSVRSTTQVPGARAQLDFASGKFQGVQEDIEEVMRLISAASGARERDDGT"
     gene            complement(1901..2269)
                     /locus_tag="VIQ50_14015"
     CDS             complement(1901..2269)
                     /locus_tag="VIQ50_14015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015687453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin family copper-binding protein"
                     /protein_id="HEY9361547.1"
                     /translation="MRTISAIRIATTLAVMLLGAASAVGAQAAPAADAAVEIDQFAFI
                     PQRITVKAGTTVTWINEDDVPHTVASSSKLFKSKALDTGDKFSFTFTTPGTYAYFCSV
                     HPHMTGAVVVEAASGADAAQ"
     gene            complement(2287..3225)
                     /locus_tag="VIQ50_14020"
     CDS             complement(2287..3225)
                     /locus_tag="VIQ50_14020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006613868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEY9361548.1"
                     /translation="MTSDRGEERGVSRRKILECMTWAGTGVLWTVAGGMPRSLGIMGE
                     AAAAGASGLTFLQISDSHVGFDKPANPNALGTLEEAVSKIKALPVQPSFIIHTGDITH
                     LSKPFEFDDADRIISQARLDVHYVPGEHDVLDEDVKLYRDRYGRGTNGAGWYSFDADG
                     VHFIGLVNVVDLKAGGLGNLGNEQLEWLEDDLKGRAASTPIVVFAHIPLWSVYPAWGW
                     GTEDAARALEYLKRFGSVTVLNGHIHQIMQKVEGNVTFHTAMSTAFPQPAPGAAPSPG
                     PMKVADDKLRSILGITDVTFKRGEQRLAIIDQPLQR"
     gene            3559..4140
                     /locus_tag="VIQ50_14025"
     CDS             3559..4140
                     /locus_tag="VIQ50_14025"
                     /inference="COORDINATES: protein motif:HMM:NF013460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0022904 - respiratory electron transport
                     chain [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HEY9361549.1"
                     /translation="MSGDITTAVLERAESHAKMIPAYTVTARVLHWTTAFLILFMIPL
                     GIVIANDWGGAAQDFLYDLHRSIGVTVIPLVILRIIYRWRHPPLPLPEDIVPMQRFAA
                     ETTHWALYALLVVQPFTGWIATSAYRAPVVVFGWFELPPIWPQDRAFSDRLFFFHALI
                     GIAIACLVAAHIGAALYHHFVRRDRVLLRMVSG"
     gene            complement(4221..4436)
                     /locus_tag="VIQ50_14030"
     CDS             complement(4221..4436)
                     /locus_tag="VIQ50_14030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361550.1"
                     /translation="MPRRAANTPGAFEAALLSLGEPAFSGQRRECPSSLEFVIDDHSS
                     APLGAPTDAMHHYLFNSMPCAYAWFHH"
     gene            complement(4649..>5319)
                     /locus_tag="VIQ50_14035"
     CDS             complement(4649..>5319)
                     /locus_tag="VIQ50_14035"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9361551.1"
                     /translation="SVAEARRAVKELGAGGVQIFTNVAGRPLDEGAFEPIFATMAELD
                     LPIWLHPARTASMPDYPKEQKSRFEMWWCFGWPYDTSVAMVRIALCGLLDRYPGLKII
                     THHLGGMIPYYDGRVGPGLDVLGSRTSDEDYSKILTSLKRPHLDYMRGFYGDTALFGG
                     GIHAVRCGLEFFGAEHVVFATDTPLGPIAPTIEVIKRLEIADADRRKIFAGNAERLLK
                     RKLS"
BASE COUNT          957 a         1674 c         1715 g          973 t
ORIGIN      
        1 cgacctgctg caggccgtca ccgcgaccga actcgccgca gccgccggcg gctgaacccc
       61 tcgaagctca acgcgccggg gacaaaccca tgggcaagct cgacggaaaa atcgcactcg
      121 tcaccggcgg caacagcggc atagggctcg ccaccgcgaa gcagttcgtg caggaaggcg
      181 cctacgtctt cataaccggg cggcgcaagc gagagttgag cgcggggatc aaggagatcg
      241 gacgcaacgt caccggcgtg cagggagaca tgtcgaagct cgccgatctc gatcgcctgt
      301 tcgcgcagat caagcaggag aagggcaggc tcgatatcgt gtttgccaat gccggcattg
      361 cgaaatacgc gcccttcggc gcgatcaccg aggaactcta cagtgcgatt ttcgatgtca
      421 acgtgaaggg cgtcctgttc acagtacaga aggcgcttgc gctgatgccg aacggggcgt
      481 ccatcattct caatgcgtcc atcgtcgcca gtaaagggct gtcgtcgaac agcgtttaca
      541 gcgccaccaa agccgcggtg cggtcgttcg cgcggacatg gacgacggat ttgaaggacc
      601 gccggatccg ggtgaacgcg gtgagcccgg gctcgatcga cacccccggg ctgaacgagc
      661 tgctcgcctc ctcggaaacc ggccagcaac gccgcaagat gatctccagc gccgttccgc
      721 tcggccgctt cggcaccccc gaggaaatcg ccaaggccgt ggtgtttctc gcctgcgacg
      781 acagcagtta catcaccgga acggaactgt tcgtggacgg cggtttcgcg caagtgtagg
      841 cggtctcgcc acaaccaatt accggggtga tgcgccgatg acgtcggacc ttccggagcc
      901 gctgcgcgag tatttcgccg ccgccaacgc ccgcgacccg gatcgggtcg ccgcctgctt
      961 tgccgaggac gccctgattc gcgacgaagg acgtgaaatc cgcggacgcg gcaatatccg
     1021 cgcctgggcg gagcacaccg gccgcatcta tcgctacacc gcgacggtca cggcggtcga
     1081 ggaacgctcg gctggcgtcg ttgtaacggc gcatctcacc ggcgatttcc ccggcagccc
     1141 aatcgatctg cgctaccggt ttacgctcgc gcagggacgc attgctcgat tggagatcgg
     1201 gccatgaggc gggataatga attcgcggct acatcgcgct cgttggcgtg atcgcgaatg
     1261 tgtgagtccg ttgtgaagcg ctggccggaa taggcgggga actgatgcga tctccttgga
     1321 cgaagggttg tcagcaagga gaacgcaaat gcctgccaag gccgcggtgg ttctcgccgt
     1381 cccgctcgtt tttgccgcca cggtggcgtt tgcggacacg tcgaaccggg ccggctatcg
     1441 ctctccattc gtcgcagagg caatgtcgca gtcgtccgcc gatcgcatcg ccgcggtgag
     1501 aaatgccgtc aacggcaacg agtcgctcgc cgcatcacag tccgccctct tcaagagcgc
     1561 cttcttctgt cgcggcggcc tggacctgac gacggtgtgg atcaaattga cggaccccgg
     1621 cggcaacgcg attcacgtca acctcgagca catcacgtcc gtcagatcca ccacgcaggt
     1681 tcctggagcc agggcccagc tcgatttcgc gagcgggaaa tttcagggcg tgcaggaaga
     1741 tatcgaggag gtcatgcggt tgatctctgc cgcctcaggc gcccgcgaga gggatgacgg
     1801 tacgtagatc gccgcgccct gtcttgctga gggtcgctgc cgttgtccgc aattctctcc
     1861 tgccccggtt gtggatgctg ttgtcgcgct cgatcaagca tcattgcgcg gcgtcggctc
     1921 cgctcgccgc ttcgaccacg acggcgcccg tcatgtgcgg atgcaccgag cagaaatacg
     1981 cgtacgtgcc aggcgtcgtg aacgtgaagg agaacttgtc tccggtatcg agcgccttcg
     2041 acttgaagag cttgctgctc gaggcaacgg tgtgagggac gtcgtcctcg ttgatccaag
     2101 tcacggtggt cccggccttc actgtgatgc gctggggaat gaacgcgaac tggtcgatct
     2161 cgactgctgc gtccgcagcc ggcgcggctt gagcgccaac agcggacgct gcgccgagga
     2221 gcatgaccgc aagcgtggtc gcgatgcgga tcgcgctgat tgtgcgcatg accgagatgt
     2281 cctgcctcag cgctgcagcg gctggtcgat gatggcaagc cgttgctccc cgcgtttgaa
     2341 agtgacgtcg gtgatgccga gaatcgagcg cagcttgtcg tcggcgactt tcatcggtcc
     2401 gggcgaaggg gcggcgcccg gcgcgggttg cgggaacgcg gtcgacatcg cggtgtggaa
     2461 cgtcacgttg ccttcgactt tctgcatgat ctgatggatg tgaccgttga gcaccgtcac
     2521 cgagccgaag cgcttgaggt actcgagtgc gcgcgcggca tcttcggttc cccagcccca
     2581 ggcgggataa accgaccata gcggaatgtg ggcgaagacg acgatgggcg tcgaggcggc
     2641 gcgacccttg aggtcgtcct cgagccattc gagttgctcg ttgccgagat tgcccagccc
     2701 gccggccttg agatcaacca cgttgacgag gccgatgaag tgcacgccgt cggcgtcgaa
     2761 gctataccag cccgccccgt tggtgccgcg gccgtaccgg tcgcggtaaa gcttcacgtc
     2821 ttcgtcgaga acgtcgtgtt cgccgggcac gtaatgcacg tcgagccgcg cctgcgagat
     2881 gatgcggtcg gcgtcgtcga attcgaaggg cttcgagaga tgggtgatat ccccggtatg
     2941 aatgataaag gagggctgca caggaagcgc cttgatcttg ctgaccgctt cctcgagcgt
     3001 gccaagggcg ttggggttcg ccggcttgtc gaacccaaca tggctgtcgc tgatttgcag
     3061 gaaggtcagc ccgctcgcgc cggccgccgc cgcttccccc atgatgccca acgaacgcgg
     3121 catgccgccg gctacggtcc acagcacccc ggtaccggcc caggtcatgc attcgagaat
     3181 cttgcgccgg ctgacgcccc gctcttcgcc tcgatcagaa gtcattgcca atctccttca
     3241 agcctgtgag ggttcaaagg agcagatcgc cgctgcgcgg atttattcct ggctctgcgt
     3301 gttcctcgcg cgcgctccaa ctcttcacga cgccgtgatg ctgcctcccg cgcgagcgaa
     3361 tccgccggga acgccgccag agcagcacct cagccctatg agcgtcgcgc catgatcgag
     3421 tcaccgcgcg gcgcgatcaa atgaaagtga acccgctcgc acgagctacg agccgttctc
     3481 cgcatcaggc tgggaataaa tcgcggccgc tctggtcaag tccgcagtgg cgactttgcc
     3541 cacgagaggg agagcaccat gtcgggcgac atcacgacgg ctgtcttgga gagggccgaa
     3601 agccacgcca agatgatccc ggcatacacc gtcaccgccc gcgtgctgca ctggacgacg
     3661 gcgtttctta tcctgttcat gatcccattg gggatcgtga tcgcaaatga ctggggtgga
     3721 gccgcgcagg attttctcta cgatctgcac cgatcgatcg gcgtgacggt cattcccctc
     3781 gtcattctgc gcatcatcta tcgttggaga catccgccac tgccgttgcc ggaggacatc
     3841 gtcccgatgc aaagattcgc cgcggaaacg actcattggg cgctctatgc gcttctcgtc
     3901 gtgcagccgt tcacgggttg gatcgccaca tcggcatatc gggcgcctgt ggtcgtgttc
     3961 gggtggttcg agctgccgcc gatctggccg caggaccgcg cattctccga ccgacttttc
     4021 ttctttcacg cgctgatcgg catcgcgata gcctgccttg tggccgccca tatcggcgcc
     4081 gcgctctacc atcatttcgt gcgcagggat cgcgtcctcc tgcgcatggt cagcggctga
     4141 cacgcggccg catgtcgacg cggatcgtag ccggtgtgcc gttggcgcaa gccggcgcga
     4201 aagcggatac gcgttggccc tcagtggtgg aaccaagcgt aggcgcaggg catcgagttg
     4261 aacagataat gatgcatcgc atcggtcggc gcaccgagcg gggccgagga gtgatcgtcg
     4321 atgacgaatt cgagcgatga cgggcactct cgtcgttgac ccgaaaacgc cggttcgccc
     4381 aaactgagca gagcggcttc gaaagcgcct ggagtatttg ccgcgcgtcg gggcatcgct
     4441 gcctccatcg acgggctcgt tctccggcgc gggacgggtc ggggcaggca agtccgtaag
     4501 catgccgtcg acgccatccg cgcgattgcg acgagctcag gatgtttctt ctgccgacaa
     4561 gactcgtgcg gaggcgattg cattccgcgc gtcacgaaga tgtgttggca ggagacgacc
     4621 gcccgcgcca ccccgacgca accgtgcgtt acgacaactt gcgcttgagc agccgctcgg
     4681 cgttgccggc gaagatcttg cggcggtcgg cgtcggcgat ctcgaggcgc ttgatgacct
     4741 cgatcgtcgg cgcgatcgga ccgagcggcg tatcggttgc gaataccacg tgctccgcgc
     4801 cgaagaattc gagcccgcaa cgcaccgcat gaatgccgcc gccgaacagc gcggtgtcgc
     4861 cgtagaaacc gcgcatgtaa tcgagatgcg gccgcttgag cgaggtgagg attttcgaat
     4921 aatcctcgtc gctggtgcgg ctgcccagca cgtcgaggcc tgggccgacg cggccgtcgt
     4981 agtacggaat catgccgcca aggtgatggg tgatgatctt gagcccggga tagcggtcga
     5041 gcaggccgca aagggcgatg cgcaccatcg ccaccgaggt gtcatagggc cagccgaagc
     5101 accaccacat ctcgaaccgt gacttctgtt ccttgggata gtccggcatg ctcgccgtgc
     5161 gcgccggatg cagccagatc ggcaaatcga gctccgccat ggtggcgaag atcggctcga
     5221 aggcgccctc gtcgagcggc cgccccgcca cgttggtgaa aatctggacg ccgccagcgc
     5281 cgagttcctt caccgcgcgg cgcgcctccg cgaccgagc
//
LOCUS       DATCWM010000712         3670 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_474823, whole genome shotgun sequence.
ACCESSION   DATCWM010000712 DATCWM010000000
VERSION     DATCWM010000712.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3670
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_474823"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(39..1331)
                     /locus_tag="VIQ50_14040"
     CDS             complement(39..1331)
                     /locus_tag="VIQ50_14040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015664142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HEY9361552.1"
                     /translation="MDETVRKINADDINPRYNWGRALPALGTMGVDFEERVDYRRLHR
                     YRLSRVKQALENSELGALLVFDVNNIRYITSTKIGEWERDKLCRWALLSRDQEPILWD
                     FGSAAIHHKLYTPWLNPENCKAGLIGLRGTVNPAFGLMERHAKEIASLLKEAGVHKMP
                     IGVDIIEPPMLFELEKAGLKIKDGQQVMLEARELKNIDEIALLNRSAAMVDGAYHLIN
                     EELKPGVRENDIVAKVNEFLYRHGSDDVEAINAISGERCNPHPHNFTDRMLRPGDQAF
                     FDILQSFMGYRTCYYRTFNVGRATPVQHDAYKKAREWLDTAIALIKPGVMTDEICKVW
                     PKAPEFGFPDEMSAFGLQFGHGLGLALHERPIISRVVSLDHPTEIKEGMVFALETYCP
                     ATDGYSAARIEEEVVVTDKGCRVITLFPAEELPISHRY"
     gene            1491..3101
                     /locus_tag="VIQ50_14045"
     CDS             1491..3101
                     /locus_tag="VIQ50_14045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016405 - CoA-ligase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="benzoate-CoA ligase family protein"
                     /protein_id="HEY9361553.1"
                     /translation="MFDAAAKLAPGAGARAAAEAIPHDYNFAADIIARNLKAGRANKA
                     AFIDPRGSWSYGQLAERVDRFGHALRSLGIRREERILLALLDTIDWPTAFLGAIKAGV
                     VPIPVSTLMTEDDYRFMLADSRAKALVVSEPLLPRFANLIGLSADLLHVIVSGEDHRG
                     HYGFEDLLAGAQPEPYTAPTTCDDMCFWLYTSGSTGRPKGAVHAHANPRLTADLYGIG
                     LLGLDESDVCYSVAKLFFAYGLGNAMTFPMAVGATTILSPDRPTPDTVAAILRRHPVT
                     VFYAVPTFYAAFLASSAAPERADLRLRCCVSAGEALPPDVGRRWRERYGVDVLDGIGS
                     TEMLHIFLSNYPGEVKYGTTGKPVAGYDIRLLDDDGSVITRKGEMGELQVRGPTSALM
                     YWNNRERSRETFLGEWTRSGDKYVQDEDGYYVYCGRRDDMLKVGGIYVSPFEVEGALC
                     THPEVLEAAVVAWPDDDELIKPKAFVVLKSPDRICEELAQALQEHVKAALAPYKYPRW
                     IEFRTELPKTATGKIQRFKLRAERTITR"
     gene            3256..>3670
                     /locus_tag="VIQ50_14050"
     CDS             3256..>3670
                     /locus_tag="VIQ50_14050"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY9361554.1"
                     /translation="MKAKAQVIEQRLPAVPQRDDHHAFIAAIGRLVRLSRAKRGMTRR
                     LLAQASGASERYLAQIEGGQGNPSVIILASIARALDVPIIELIPRSNGRTAAMAQILD
                     VLGRVPLAELPELAALLERRAGQDTAADRGRRIALV"
BASE COUNT          626 a         1181 c         1185 g          678 t
ORIGIN      
        1 cggcggggga gagttcccgc ccccgccgcg cggctacgtc aatatcggtg gctgatgggc
       61 agctcctcgg ccggaaacag cgtgatcacg cggcagccct tgtccgtcac gacgacctcc
      121 tcttcgatgc gggcggcgga atatccgtcg gtcgcgggac aataggtctc cagtgcgaac
      181 accatgccct ccttgatctc ggtcggatga tcgagcgaga ccacgcggga gatgatgggc
      241 cgctcatgca gcgcgaggcc aagcccgtgc ccgaattgca ggccgaaggc cgacatctca
      301 tcgggaaagc cgaactccgg cgccttcggc cataccttgc aaatctcatc cgtcatgacg
      361 cccggcttga tgagggcgat ggcggtgtcg agccactcgc gcgccttctt gtaggcgtcg
      421 tgctgcaccg gcgtcgcccg cccgacattg aaggtgcggt agtagcacgt gcgatagccc
      481 atgaacgatt gcagaatgtc gaagaacgcc tggtcgccgg ggcgcaacat gcggtcggtg
      541 aaattgtgcg ggtgcggatt gcagcgctcg cccgagatcg cgttgatcgc ctccacatcg
      601 tctgacccgt ggcggtagag gaattcgttg accttggcga cgatgtcgtt ctcgcgcacg
      661 ccgggcttga gctcttcgtt gatgaggtga taggcgccgt cgaccatggc ggcggagcgg
      721 ttgagcagcg cgatctcgtc gatatttttc agctcgcgcg cctcgagcat cacctgctgt
      781 ccgtccttga tcttgagacc cgccttctcc agctcgaaca gcatcggcgg ctcgatgatg
      841 tcgacgccga tcggcatctt gtggacgccg gcctccttga gcagcgacgc aatctccttg
      901 gcatggcgct ccatcagccc gaacgcaggg ttgaccgtgc cgcgcagacc gatgaggcct
      961 gccttgcaat tctcggggtt gagccacggg gtatagagct tgtggtgaat ggcggccgag
     1021 ccgaaatccc acaggatcgg ctcctggtcg cgactgagca gcgcccaccg gcacagcttg
     1081 tcgcgctccc attcgccgat cttcgtcgag gtgatgtagc ggatgttgtt gacgtcgaag
     1141 acgagcagcg cgccgagctc ggagttctcc agcgcctgct tgacccggct cagccgataa
     1201 cggtgtaggc ggcgatagtc gacccgttcc tcgaaatcga ctcccatggt gccgagcgcc
     1261 ggcagggcgc gtccccagtt gtagcgcggg ttgatgtcgt cggcgttgat cttgcggact
     1321 gtttcgtcca tgggagcctc tcctacacgc tttaatactt gcgatacttg tgccggcgcc
     1381 gccggcgccc cggtggcgcg actatagcaa gcttttcgtt gcggcagtca gggccggctt
     1441 gcataattcg accaaacaac aagccgcctg agggattgag gaaacgcgcc atgttcgatg
     1501 ccgccgcgaa gcttgcgcca ggcgccggtg cgcgcgccgc cgccgaggcg atcccgcacg
     1561 attacaactt cgcggcggac atcatcgcgc gcaatctcaa ggctgggcgc gccaacaagg
     1621 cggcctttat cgatccgcgc ggaagttgga gctatggcca actcgccgag cgcgttgacc
     1681 gctttggcca cgcgttgcgg tcgctgggca tccggcgcga ggagcgcatc ctgctcgcgc
     1741 tcctcgacac catcgactgg cccaccgcct tcctcggcgc catcaaggcc ggcgtggtgc
     1801 cgattccggt gagcaccttg atgaccgagg acgattaccg attcatgctc gccgacagcc
     1861 gcgccaaggc ccttgtcgta tcggagccgc tgttgccgag attcgccaat ctcatcggat
     1921 tgagcgctga cctgttgcac gtgatcgtct cgggcgaaga tcaccgcggg cactacggtt
     1981 tcgaagattt gctcgcaggc gcgcagcccg agccctacac cgcgccgaca acgtgcgacg
     2041 acatgtgctt ttggctctat acctccggct cgaccggcag gcccaaaggc gcggtgcacg
     2101 cgcacgccaa tccgcgcctc actgccgacc tctacggcat cgggctgctt ggtctggacg
     2161 agagcgacgt ctgctactcg gtggcgaagc tgtttttcgc ctatgggctt ggtaacgcga
     2221 tgacctttcc gatggcggtc ggcgcgacca ccattctttc gcccgatcgg ccgacgcccg
     2281 acacggtcgc ggcgatcctg cgccgccatc ccgtgacggt gttctatgcc gtgccgacct
     2341 tctatgccgc tttccttgcc agctccgccg cgcccgagcg cgccgatttg aggctgcggt
     2401 gctgcgtgtc cgcgggggag gccttgccgc ccgacgtcgg ccggcgctgg agggaacgct
     2461 acggcgtcga cgtgctcgac ggcatcggct cgaccgagat gctgcacatc ttcctgtcga
     2521 actatccggg tgaggtgaaa tacggcacca ccggcaagcc ggtggcaggc tacgacattc
     2581 gtcttctcga cgacgatggc agcgtgatca cgcgcaaggg cgagatgggc gagttgcaag
     2641 tgcgcggccc gacgagcgcg ctcatgtatt ggaacaatcg cgagagatcg cgcgagactt
     2701 tcctcggcga atggacgcgc tcgggcgaca aatatgtgca ggacgaggac ggctactacg
     2761 tctactgcgg acggcgcgac gacatgctca aggtcggcgg catctatgtc tcgccgttcg
     2821 aggtcgaagg cgcgctctgt acccaccccg aggtgctgga agcggcggtg gtcgcctggc
     2881 cggatgacga cgagctgatc aaacctaagg cctttgtggt gctcaagtcg cccgacagga
     2941 tctgcgaaga gctggcgcag gcgctgcagg aacacgtcaa ggccgcgctc gcgccctaca
     3001 aatatccgcg ctggatcgaa tttcgcaccg aacttcccaa gacggcgacc ggcaagatcc
     3061 agcgcttcaa gctgcgcgcc gagcgcacca tcacaagata accattcatc cgcggccggg
     3121 ctgaaccgca caggcctaag ccgagcggcg gcgctgcggc gcgcccacga ggatttccgg
     3181 gccgattgac ggtagagatc gtatgcatta tagtgcatga actataatgc cgctcgagag
     3241 tgtggttgcg acgctatgaa ggctaaagcg caggtgatcg aacagcgctt gccggccgtg
     3301 ccgcagcgcg acgatcacca cgcgttcatt gccgccatcg gtcgcctggt gcggctctcg
     3361 cgcgccaagc gcgggatgac gcgccgtctg ctcgcgcagg cttcgggtgc ctcggagcgc
     3421 tatctggcgc agatcgaagg cgggcagggc aatccgtccg tgatcatcct cgcctcgatc
     3481 gcgcgagcgc tcgacgttcc catcatcgag ctcattccgc gcagcaacgg gcggacagca
     3541 gccatggcgc agattctcga tgttctcggg cgcgtgccgc ttgcagaact ccccgagctc
     3601 gccgcgttgc tcgagcgccg ggccgggcaa gatacggccg ccgatcgcgg gcggcggatc
     3661 gcgctcgttg
//
LOCUS       DATCWM010000713         6026 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_329338, whole genome shotgun sequence.
ACCESSION   DATCWM010000713 DATCWM010000000
VERSION     DATCWM010000713.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6026
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_329338"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..354)
                     /locus_tag="VIQ50_14055"
     CDS             complement(<1..354)
                     /locus_tag="VIQ50_14055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361555.1"
                     /translation="MCDYSLHNVKSRAARVGDKLTTRNFGTGTRGFAAQEDATMAVCV
                     LPGTELAFSRDVACTASGFLGLGARRIAYQTAIFRQVNKDQPRVHHDALEFPDGQTVL
                     LTELVEGQEATVLQLP"
     gene            complement(448..1743)
                     /gene="ccrA"
                     /locus_tag="VIQ50_14060"
     CDS             complement(448..1743)
                     /gene="ccrA"
                     /locus_tag="VIQ50_14060"
                     /EC_number="1.3.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019904923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043880 - crotonyl-CoA reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crotonyl-CoA carboxylase/reductase"
                     /protein_id="HEY9361556.1"
                     /translation="MPAVARTNSPQAAASKDLYEIGEVPPLGHVPARMHAWAIRKERH
                     GPPETSMQLEVLPTWPIGEDEVLVYVMAGGVNYNGVWAGLGVPISPLDVHKHPFHIAG
                     SDASGIVWACGSKVRRWKVGDEVIVHCNQDDGDDEDCNGGDPLLSPSQRIWGYETPDG
                     SFAQFCRVQSRQLMTKPPHLSWEEAACYTLTLATAYRMLFGHAPHTMKPGDHVLVWGA
                     SGGLGVFGVQLAAASGANAVGIISDESKRDYVMQLGAKGVINRKEFSCWGQMPKVGTP
                     EYDSWVKEARKFGKAIWEITGKRDVDIVFEHPGEATFPVSCLVVKRGGMVVFCAGTSG
                     YNLTFDARYVWMRQKRVQGSHFAHLKQASAANQFVLDRRIDPCMSEVFPWTKIPHAHE
                     LMRTNRHPPGNMAVLVNAPRTGLRTLDDVIEAGAPSQAA"
     gene            1988..2239
                     /locus_tag="VIQ50_14065"
     CDS             1988..2239
                     /locus_tag="VIQ50_14065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019861233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HEY9361557.1"
                     /translation="MGIDSIIIMIIVGAIAGWLAGQIVRGFGFGLIWDIIIGIIGAFI
                     GVWLLTQLGFVPFSGFIGSIVNAVIGAVVLLVIVGFIKR"
     gene            2500..4488
                     /locus_tag="VIQ50_14070"
     CDS             2500..4488
                     /locus_tag="VIQ50_14070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013214262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein meaA"
                     /protein_id="HEY9361558.1"
                     /translation="MSEPSTGAARARDKPWIFRTYAGHSNARDSNALYRKNLAKGQTG
                     LSVAFDLPTQTGYDSDHPLAKGEVGKVGVPISHLGDMRTLFEQIPLGEMNTSMTINAT
                     AAWLLALYVALADEQGVAREKLQGTTQNDIIKEYLSRGTYVFPPAPSMRLTKDVILFT
                     TREMPKWNPINVCSYHLQEAGATPVQELAFALATAIAVLDTVQASGVVERGAFGEVVG
                     RISFFVNAGLRFITELCKMRAFAELWDEITAERYGVNDPKQRLFRYGVQVNSLGLTEQ
                     QPENNVPRILIEMLAVTLSKSARARAVQLPAWNEALGLPRPWDQQWSLRMQQILAYET
                     DLLEYGDIFDGAPAIAEKVERLKREAKEELAHINALGGAIAAVEHGYMKQQLVESNTR
                     RVEAIERGEQVVVGVNRFMESESSPLAGAADAILTVSPQAEAEQIERLKAWRSARDQK
                     AASAALKELRTAARENRNIVPASIVCAKAGVTTGEWGFALRESFGEYRAPTGVGRAPR
                     NETVGLDDLRAEVERVSRKLGRRLTFVLGKPGLDGHSNGAEQIAVRARDAGMEVVYDG
                     IRLTPAEIVEAAREQGAHVLGLSILSGSHVPLVKDVVARMKSAGLDDIPVIVGGIIPA
                     EDAQALQQAGVAAVYTPKDFELNRIMADIVRIVDRTAA"
     gene            4727..5512
                     /locus_tag="VIQ50_14075"
     CDS             4727..5512
                     /locus_tag="VIQ50_14075"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEY9361559.1"
                     /translation="MKRLTVASIGVIALAALKPAAAADYGPPPVVYAPAPAIVYFSWT
                     GFYFGAHAGGGWGRKNETGAPYPFLTDTITPAPAAFDVNGWLAGGQIGAQYQAGSLVY
                     GVEADVSGANLTGSGSCASVSLLNGPLPPGGCSAKVVGVGTIAGRLGVALDRVLIYGK
                     GGGAWANDQYDLTSPNVAFFPAFNGNETRWGWMGGVGVEYAFLDNWSAKIEYNYLSFR
                     TSNLLFTDTTQQFLFNTNIQQQLHLVKVGLNYRWGWQPVGIRY"
     gene            complement(5576..>6026)
                     /locus_tag="VIQ50_14080"
     CDS             complement(5576..>6026)
                     /locus_tag="VIQ50_14080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY9361560.1"
                     /translation="VTVDKVTEAPGKAASDGAEARDQAVHPLAVLCAEDNPHGRVLLN
                     TILAELGHRADFVGTGAAAVEAVARGGYDVVLINLTLPDIDGVEATRRIRALAGRAGR
                     VPIVGVSGRASAGGENAGRAAGMNGCLTKPLSPGALTQALGSVMAEA"
BASE COUNT         1065 a         1957 c         1945 g         1059 t
ORIGIN      
        1 cggcagttgc agcacggttg cctcctgacc ctcgacgagt tcggtcagga gtacggtctg
       61 cccatccgga aactcgagcg catcgtgatg cacccgcggc tggtccttgt tgacctgccg
      121 aaagatcgcc gtctggtagg cgatcctgcg cgcacccaag ccgagaaatc cggacgcggt
      181 gcatgcaaca tcccgggaaa acgcgagttc cgttcccggg agaacgcaca ctgccatggt
      241 ggcatcttcc tgggcggcaa atccacgtgt gccggtacca aagttgcgcg tggtgagctt
      301 gtcgccgact ctcgcagcac gcgacttcac gttatgcagg ctgtagtcgc acatggtgag
      361 gactcctctt gcaagccccc cgtacgtcca ccgccgtatt cgaagcaata aaggtgccaa
      421 tcttgtggca ggacggaaaa agcccgccta tgccgcctgc gagggcgcgc ccgcctcgat
      481 gacgtcgtcc aatgtccgca gccccgtgcg cggcgcgttg accagcactg ccatattgcc
      541 gggcggatgc cggttggtgc gcatcaactc gtgagcgtgg gggatcttgg tccaggggaa
      601 gacttcgctc atgcaggggt cgatgcggcg gtcgagcacg aactggttgg ctgcagaggc
      661 ctgcttgaga tgggcgaaat gcgagccctg cacgcgtttc tgccgcatcc acacgtaccg
      721 ggcgtcgaag gtgagattgt aaccggacgt gccggcgcaa aataccacca tgccgccgcg
      781 cttcacgact aggcaggaga ccgggaacgt cgcctcgccc ggatgctcga acacgatgtc
      841 gacgtcgcgc ttgccggtaa tctcccagat cgccttgccg aacttgcgcg cctccttgac
      901 ccagctatcg tattccggcg tgccgacctt cggcatttgt ccccagcagg aaaactcctt
      961 gcgattgatc acacccttgg cgcccagctg catcacataa tcgcgcttgc tttcatccga
     1021 gatgatgccg acggcattgg cgcccgacgc ggccgcgagc tgcacgccga agacgccaag
     1081 cccgccggag gcgccccaca ccagcacatg atcgcctggc ttcatggtgt ggggcgcatg
     1141 gccgaacagc atgcgatagg cggtggcaag ggtaagcgtg tagcaggccg cctcttccca
     1201 gctcagatgt ggcggcttcg tcatcagttg gcgcgactgc acgcggcaga attgcgcgaa
     1261 cgatccgtcc ggagtttcgt aaccccaaat gcgctgtgac ggcgacaata aggggtcgcc
     1321 gccgttgcaa tcctcgtcgt caccgtcgtc ttggttgcaa tggacgatga cctcgtcccc
     1381 cactttccag cggcgcactt ttgaaccgca agcccaaacg atgcccgagg catcagagcc
     1441 ggcgatatgg aagggatgct tgtgcacgtc gagcggcgag atcggaacgc cgagtcccgc
     1501 ccacacgccg ttgtagttga cgccgccggc catgacatag accagcactt cgtcctcgcc
     1561 gattggccag gtcggcagca cttcgagctg catcgaggtc tctggcggac cgtggcgttc
     1621 cttgcggatg gcccaggcgt gcatccgtgc cggcacgtgg ccgagcggag gcacttcgcc
     1681 gatctcatag agatccttgg acgccgctgc ctgcggcgaa ttggtccgcg cgacggccgg
     1741 catgagcgcc tccgaaattg gcccgacgca ccgcagtctg ccgcatttca tgctgcaccg
     1801 caatatcggc gggcggccgc attcgggcgg cacgcgactg gcaaacttgt tcaccgggcg
     1861 gcggcggcgt ttgctgacag tccgatcggc ttgagctacg cttccaaagt tgccttaagt
     1921 tgatcctaac tgcatcgcaa agtcgcgcca gcacctcgtg cttgaccgag gggggaggaa
     1981 tatcgtgatc ggaatagaca gcatcatcat catgatcatc gtcggcgcga tcgctggctg
     2041 gttggccggg cagatcgtgc gcggctttgg gttcggactg atctgggaca tcatcatcgg
     2101 catcatcggc gccttcatcg gagtatggct gctcacgcag ttgggattcg tgccgttctc
     2161 cggcttcatc ggctcgatcg tcaacgcggt gattggagcc gtcgtactgt tggtgatcgt
     2221 cggtttcatc aaacgctagg gcggatcggc gctcccgcgc cgtgcagcgc aggcgcgggc
     2281 gaagcaacgc ccgcagctcg aacaggccag gagccttaag gcgcgctggg gcgttataga
     2341 ttttgctgaa gcgagttcgg gcgctcccga ccgcgggagc ttcccgcttg ctcgtggcac
     2401 cgcgaacaga cggcgcagtg tgactttcga acggctaccc tttggagcgt cctcggagta
     2461 tgctgcgccg cacaatcgga tggcccagcg aggcgcccca tgagcgagcc atcgaccggc
     2521 gcggcccggg cacgcgacaa gccctggatc ttccgcacct atgccggtca ttccaacgcg
     2581 cgcgattcca acgcgctcta ccgcaagaac ctcgccaagg gtcagactgg gctctcggtc
     2641 gccttcgatc tgcccaccca aaccggatac gacagcgacc acccgttggc taagggcgag
     2701 gtcggcaagg tcggcgtacc aatctcgcat ctcggcgata tgcgtacgct gttcgagcaa
     2761 atcccgctcg gagagatgaa cacctcgatg actatcaacg cgacggccgc ctggctgctc
     2821 gcgctctatg tcgcgctcgc cgacgaacag ggcgtcgcgc gcgagaaact gcaaggcacc
     2881 acgcagaacg acatcatcaa ggaatatctc tcccgcggca cctacgtgtt tccgcccgcc
     2941 ccctccatgc ggctcaccaa agatgtgatc ctgttcacca cccgcgagat gccgaaatgg
     3001 aatccgatca atgtgtgctc gtatcacctg caggaggcgg gcgcgacgcc cgtgcaggaa
     3061 cttgcgtttg cgctcgcaac cgcgattgcg gtgctcgaca ccgtgcaggc ttcgggagtg
     3121 gtcgagcgcg gcgccttcgg cgaggtggtc ggacgcatct cgttcttcgt caacgccggc
     3181 ctgcgcttca tcaccgagct gtgcaagatg cgcgctttcg ccgagctctg ggacgagatc
     3241 accgcggagc gctacggcgt caatgatccc aagcagcggc tgttccggta tggcgtacaa
     3301 gttaattcgc ttgggctgac cgagcagcag ccggagaaca acgtcccccg catcctcatc
     3361 gagatgctgg cggtcacgct gtccaagagc gcccgcgcgc gggcggtgca actgccggca
     3421 tggaacgaag cgctcggcct gccgcggcct tgggatcagc aatggtcgct gcgcatgcag
     3481 caaatcctcg cctacgagac ggacctgctt gaatacggcg atattttcga cggcgcgccg
     3541 gcgattgccg agaaggtcga gcggctcaag cgcgaggcca aggaagaact ggcgcatatc
     3601 aacgcgctcg gtggggcgat tgccgccgtt gagcacggct atatgaagca gcagctcgtc
     3661 gaatcgaaca cgcgccgcgt cgaggcgatc gaacggggcg agcaggtcgt ggtgggggtc
     3721 aatcgcttca tggaaagcga gtcctcgccg ctcgccggcg cggccgacgc catcctcacg
     3781 gtctcgcccc aggccgaagc cgagcagatc gagcgcctca aggcgtggcg cagcgcgcgc
     3841 gaccaaaagg cggcctcggc ggcgctcaag gagttgcgca cggcagcgcg cgagaatcgc
     3901 aacatcgtgc ccgcctccat cgtctgcgcc aaagccggcg tcacgaccgg tgaatggggc
     3961 ttcgctttgc gcgaaagctt cggcgagtac cgcgcgccca ccggagtcgg gcgcgcgccg
     4021 cgcaacgaaa cggtcggcct cgacgacttg cgtgccgagg tcgagcgggt atcgcgcaag
     4081 ctcggacggc ggctgacgtt cgtgctcggc aagcccggcc tcgacgggca ctcgaatggc
     4141 gccgagcaga tcgccgtgcg cgcacgcgac gccggcatgg aggtcgtcta cgacggcatc
     4201 cgcctaacgc ccgcggagat cgtcgaagcc gcccgcgagc agggcgcgca tgtgctgggg
     4261 ctgtcgatcc tctcgggctc ccacgtgccg ctggtgaagg acgtggttgc gcgcatgaaa
     4321 agcgccggcc tcgatgatat ccccgtgatc gtcggcggca tcatcccggc ggaggacgcg
     4381 caggcgctcc agcaagccgg cgtggccgcg gtctatacgc ccaaggattt tgagctcaac
     4441 cgcatcatgg ccgacatcgt tcggatcgtg gatcgcaccg cggcataggc ttgcaccgcg
     4501 acgggggaaa gttcgccgcc gttgctccgc tgcaacgaaa cgcaaaagag acaatcattt
     4561 caactctgta gccacggtcc catcggggcc cctagggatg atttttcctt cgtgcgccgc
     4621 ggccgccctt gactcgccgc agtctgacgc gacggtttgc gacgacatcg cgcggccctg
     4681 ctggccgctg caagcgtcta gcgtcgtggt tcggggggac cgtcggatga aaagactgac
     4741 tgtcgcgagc atcggcgtga tcgcgctcgc tgcgctcaaa cccgcagccg ccgcggacta
     4801 tggcccgccc ccggtcgttt acgcgccggc cccggccatc gtgtatttca gctggaccgg
     4861 gttttatttc ggcgcccatg ctggcggggg ctgggggcgc aagaacgaga ccggcgctcc
     4921 ctacccgttc ctcaccgaca ccatcacgcc ggcgcccgct gcctttgacg tgaacggatg
     4981 gctggccggc ggccagatcg gcgcccagta ccaggccggc tcgctggtgt acggcgtgga
     5041 ggcggacgtc agcggggcaa atctcaccgg cagcggctct tgcgcgtcgg tctcgttgct
     5101 caacggcccg cttccgccgg gcgggtgcag cgcaaaggtc gtgggggtgg gcacgatcgc
     5161 gggccggctg ggcgtcgcgc tcgatcgcgt gctgatctac ggcaagggcg gcggcgcctg
     5221 ggcgaacgac caatacgatc taacgtcgcc gaacgtcgct ttcttccccg cgttcaacgg
     5281 caacgagacg aggtggggtt ggatgggggg cgtcggcgtc gaatacgcat ttctcgataa
     5341 ttggtcggca aagatcgaat acaattacct gtcgtttcgc accagcaacc tgctatttac
     5401 ggatactacc cagcagttct tgttcaacac caacattcag cagcagttgc atctcgtgaa
     5461 agtcggtctc aattatcgat ggggttggca gccggtcgga atccgttatt gacgccgaca
     5521 taagagaaat cggtgcgccg cgcccgaagc gcggcgtttt catttcgcaa ccgcgctagg
     5581 cctcggccat gaccgatccg agcgcctggg tgagcgcgcc cgggctaagc ggcttggtca
     5641 gacagccgtt catccccgcg gcccgcccgg cattctcgcc gccagcgctc gcgcggccgg
     5701 acacgccgac gatcggcacg cggccggcgc gaccggcaag cgcgcggatg cgccgcgtcg
     5761 cttcgacccc gtcgatgtcg ggcagcgtaa ggttgatcaa cacgacgtcg tagccgcccc
     5821 gcgccaccgc ctcgaccgcc gcagcgccgg tgccgacgaa atcagcgcgg tgaccgagct
     5881 cggcgaggat cgtgttgagc aggacgcggc cgtgcggatt gtcctcggcg cagagaacgg
     5941 cgagcggatg caccgcttgg tcgcgcgctt cggcgccatc ggaagcggct tttcccggtg
     6001 cctccgtcac cttgtcaacg gtgacg
//
LOCUS       DATCWM010000714         2229 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_426230, whole genome shotgun sequence.
ACCESSION   DATCWM010000714 DATCWM010000000
VERSION     DATCWM010000714.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2229)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2229)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2229
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_426230"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..524
                     /locus_tag="VIQ50_14085"
     CDS             <1..524
                     /locus_tag="VIQ50_14085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HEY9361561.1"
                     /translation="LRRFARHYRSGEAIPEDQLRRLVAARNFNQGQATVEYVASALID
                     LDIHLQPAPDATFDIGSFEQAALARIGMLAEIVMRHRPPHFQHVFAGAGYAAAYYSYL
                     WSEVLDADAFAAFEETGDIFDPSTAKKLHDHVYAAGGSRDPAELYSAFRGRLPTPDKL
                     LKRRGLGDGSAQA"
     gene            660..>2229
                     /locus_tag="VIQ50_14090"
     CDS             660..>2229
                     /locus_tag="VIQ50_14090"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEY9361562.1"
                     /translation="MDLHTAGHRRGVVAAPHEAAVEAGRAVLADDGNALEAMVAMAAT
                     VAAVYPHMSQLGGDGVWLVREPSGHLRVLMAVGRAGAHARRELYRDHETIPPRGPLAA
                     LTVPGAVAGWALALEVASAYGGRMQLTDLLAPAIAHAKEGAVVTRSQAHVTSEKLPEL
                     KDVPGFADVFLIEGKPPAVGARLRQIALAATLDHLAHAGLGDFYRGDIGREIAADLER
                     IGGPVARADLERCRATLAEPLSVVLDAGRLFNTPPPTQGLASLIVLALFERLRVVQGE
                     GFDHIHGVVEATKRAFAVRERVITDPDRLRDRIERYLDAKFLDAEALAIDRRKAAAWP
                     APAGAGGTVWMGAADSSGLVVSYNQSLYWEFGSGVVLPRTGVLMQNRGSSFSLDDGAL
                     SPLEPGRLPPHTLNPALAVLADGRVMAYGTMGGDGQPQTQAALFTRHVHYRSPLAHAI
                     DAPRWLLGRTWGANRVNLRMESRFDGALVDRLLSAGHDVEILPQAYSELMGHAGAVVL
                     HPDATFEAGHDPRAD"
BASE COUNT          327 a          777 c          729 g          396 t
ORIGIN      
        1 tcttgcgccg cttcgcccgt cactaccgca gcggcgaggc gattccggag gatcaattgc
       61 gtcggcttgt cgcggcgcgc aacttcaacc agggccaagc gacggtggaa tacgtcgcct
      121 cggcgctgat cgatctcgat atccatcttc agcccgcgcc cgacgcaacc ttcgacatcg
      181 gcagcttcga gcaggccgcg ctcgcgcgca tcggcatgct tgccgagatc gtcatgcggc
      241 accggccccc ccatttccag cacgtcttcg ccggtgccgg ttatgccgcg gcctattaca
      301 gctatctgtg gtcggaggtg ctcgacgccg acgcctttgc ggcattcgag gagaccggcg
      361 acattttcga tcccagcacc gctaagaaac tccacgatca tgtctatgcc gccggcggct
      421 cgcgcgatcc ggccgagctc tacagcgcct tccgcggccg actgccgacc cccgacaagc
      481 tgctcaagcg gcggggcctc ggggacgggt ctgcgcaagc atgatctcga tcgttatgat
      541 cccgcggcgc gggctctagc cggcgagccg gaatccatat ctaccgggcg cgcgaatttc
      601 ccgggattgt cgctcttgga atctggctct cgcgcgcggc cgtaacaacg ggatctccca
      661 tggacctcca caccgccggt catcgccgcg gcgtcgtcgc tgcgccgcac gaagctgcgg
      721 tcgaagcggg acgcgcggtg ctcgccgatg acggcaacgc gctggaggcc atggtcgcaa
      781 tggcggccac tgtcgcagcc gtctatccgc acatgtcaca actgggcggc gacggcgtct
      841 ggcttgtgcg tgagccctcc ggtcatttgc gcgtcctgat ggcggtgggc cgcgccggcg
      901 cccacgcgcg gcgcgagctt taccgcgacc acgaaacgat tccaccacgc ggtccgttgg
      961 cggcgctgac cgtgcccggc gccgtcgccg gttgggcgct ggcgcttgag gtggccagcg
     1021 cctacggcgg acgcatgcag ttgaccgatc tgctcgcgcc cgccatcgcg cacgcgaaag
     1081 agggcgcagt cgtcacgcgc agccaagccc acgtcacgtc cgagaagctt cctgagctca
     1141 aggatgtgcc cggctttgcc gatgtctttt tgatcgaggg caagccccct gccgtgggcg
     1201 ccaggctccg acaaatcgcg ctcgcggcaa cgctcgacca cctcgcccac gctggcctcg
     1261 gcgacttcta tcgcggcgac atcggccgcg agatcgccgc ggatctcgaa cgcatcggcg
     1321 gcccggtcgc tcgcgccgac ctcgaacgct gccgcgccac gctggccgag ccgctctccg
     1381 tcgtgctcga tgcgggcagg ctgttcaaca ctccgccacc gactcagggc cttgcgtcgt
     1441 tgatcgtgct cgcgctgttc gagcggttgc gcgtcgtgca aggcgaggga ttcgatcaca
     1501 tccatggggt agtcgaggca accaagcgcg cgttcgccgt gcgcgagcga gtgatcaccg
     1561 atcccgatcg cctgcgggat cggatcgagc gctatctcga tgcaaaattt ctcgacgccg
     1621 aggcgcttgc aatcgatcgt cgcaaggccg cggcttggcc ggcgcccgct ggcgcgggcg
     1681 gcaccgtctg gatgggtgcc gcggactcct cggggctcgt cgtttcctat aatcagtcgc
     1741 tttattggga gttcggctcc ggggtggtgc tgcccaggac cggcgtgctg atgcagaatc
     1801 gaggctccag tttctcgctc gacgacggcg cgttgagccc gctggagcca ggccggctgc
     1861 cgcctcacac gctcaatccg gcgctcgccg tactcgccga cggtcgcgtc atggcctacg
     1921 gcacgatggg cggcgacggc cagccgcaga cgcaggcggc gctttttacc cggcacgtgc
     1981 actatcgcag tccgctcgcg cacgcgatcg acgccccgcg ctggctgttg ggtcgcacct
     2041 ggggcgcgaa ccgcgtcaat ctgcgcatgg aatctcgttt cgacggcgcg ttggtcgacc
     2101 gtttgctatc ggctggccac gatgtcgaaa tcttgccgca ggcttattcg gagctgatgg
     2161 gccatgccgg cgcggtggtg ctgcatccgg acgcaacgtt cgaagccggt cacgatccgc
     2221 gcgccgacg
//
LOCUS       DATCWM010000715         2555 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_183513, whole genome shotgun sequence.
ACCESSION   DATCWM010000715 DATCWM010000000
VERSION     DATCWM010000715.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2555)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2555)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2555
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183513"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1150
                     /locus_tag="VIQ50_14095"
     CDS             <1..1150
                     /locus_tag="VIQ50_14095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="metallopeptidase TldD-related protein"
                     /protein_id="HEY9361563.1"
                     /translation="AVRAVKGGYSGRYAEAPGRTNVRLYGDDNPLGAPSFETKVRLLE
                     SIDSYARGRDPRVRQVSVSLGATWQLIEILRGEGEIYRDVRPLVRVNVSVVVGRGDRQ
                     EAGSHGYGGRESFSRFLATDAWQGAADRAVRQALVNLEAIPAPAGEMDVVLAPGWPGI
                     MLHEAVGHGLEGDFNRKKTSAFAGLMGQRVASKGVTVVDDGTLAQRRGSLSIDDEGTP
                     TGRTVLIEDGILVGYMQDRQNARLMGMRPTGNGRRQGYAHLPMPRMTNTYMLAGGHLP
                     GEIIASVKNGIYAVNFGGGQVDITSGKYVFQVTEAYKIENGKLAQPLKGAMLIGNGPT
                     DLNRIGMIGNDFELDPGIGTCGKNGQGVPVGVGQPTLRMDRITVGGTG"
     gene            complement(1171..1662)
                     /locus_tag="VIQ50_14100"
     CDS             complement(1171..1662)
                     /locus_tag="VIQ50_14100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6644 family protein"
                     /protein_id="HEY9361564.1"
                     /translation="MIEAAPALFVALEQSGFAASIRQSTWLYPAANIGHIVSLTFFAG
                     AIAVMDVRLLGGLAATAPARLLTRARNFAFAALAGMAMTGAVLFSAEASHLAVNRAFQ
                     LKAVLVAAGLVNIAVYEVWARRAVERLQPGAPMPARAKIAGLLSLGIWVAVAACGRSI
                     AYF"
     gene            complement(1662..2009)
                     /locus_tag="VIQ50_14105"
     CDS             complement(1662..2009)
                     /locus_tag="VIQ50_14105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9361565.1"
                     /translation="MMRPVLFVSAFALMTSAAVAHHGWGSYDAGKPITVAGPIVTSKF
                     ENPHATITVQASDKVWTVTLAPTSRMTSRGATEKVVAVGQNVSAYGYPSTVQTDEMRA
                     ERITVNGKTYEMR"
     gene            complement(2093..>2555)
                     /locus_tag="VIQ50_14110"
     CDS             complement(2093..>2555)
                     /locus_tag="VIQ50_14110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PAN domain-containing protein"
                     /protein_id="HEY9361566.1"
                     /translation="FDRAGGDYASFPMRLGDPAQCAARCERDARCRAWAFSYPATENA
                     NAVCWLKSKVMPRFEAACCASGVRGTGVIEPKSGATEFGVDRNGGDYRHFEVPDDSSG
                     KSCEAACEAEDACRAWTYVRPGYVGSSAVCFLKNRITRPARKPCCISGVVR"
BASE COUNT          470 a          823 c          836 g          426 t
ORIGIN      
        1 ggccgtgcgc gcggtgaagg gcggctatag cggtcgctat gccgaggcgc cggggcgcac
       61 caatgtccgc ctctatggcg acgacaaccc gctcggcgcg ccgtccttcg aaaccaaggt
      121 gcggctgctg gagtccattg attcctacgc ccgagggcgg gatccgcgcg tacgccaggt
      181 ttcggtctca ctcggcgcga catggcaatt gatcgaaatc ctgcgtgggg agggcgagat
      241 ctaccgggac gtgcggccac tggtgcgtgt gaatgtgtcg gtggtcgtcg gccggggtga
      301 tcggcaggaa gcaggcagtc acggctacgg gggacgggag agcttctccc gtttcctcgc
      361 aacggatgcc tggcaaggcg ccgccgaccg agccgtgcgc caggcgctgg tcaatctcga
      421 ggccattccg gccccggcgg gcgagatgga cgtggtcctt gcccccggct ggccgggcat
      481 catgctgcac gaggccgtgg gtcacggcct cgaaggcgat ttcaaccgta agaagacctc
      541 tgcattcgcc ggcctgatgg gacagcgcgt cgcctcgaaa ggcgtgaccg tggtcgacga
      601 cggcacgctt gcgcagcggc gcggttcgct ctcgatcgac gacgaaggca cgccgaccgg
      661 tcgcacggta ctgatcgagg acggcattct ggtcggctac atgcaagacc gccagaacgc
      721 gcgcctcatg ggcatgaggc ccaccgggaa tggtcgccgg caaggctatg cccatctgcc
      781 aatgccgcgc atgaccaata cctacatgct cgcgggcggc cacctgccgg gcgagatcat
      841 cgcctcggtc aagaacggca tctatgccgt caatttcggc ggcggtcagg tcgacattac
      901 ctcgggcaaa tacgtgttcc aggtcactga ggcctacaag atcgagaatg ggaagctcgc
      961 ccagccgctc aagggtgcca tgctgatcgg caacggcccg accgacctta accgcattgg
     1021 catgatcggc aacgatttcg agctcgatcc cggcattggc acctgtggca agaatggcca
     1081 aggcgtgccg gtcggcgtcg gtcaacctac tctgcgcatg gaccgcatca ccgtcggcgg
     1141 gacgggataa ggcggttcgc agcctgggtt ctagaaatag gcgatgctcc gtccgcaggc
     1201 ggcaacggcc acccagatcc cgagcgaaag cagtcctgcg attttggcgc gcgccggcat
     1261 cggggccccg ggttgaaggc gctcgactgc acgtctcgcc cagacctcgt agacggcgat
     1321 attgacgaga cccgctgcga ccagaacggc cttgagctgg aatgcccgat tgacggcgag
     1381 atggctcgcc tcggccgaga acagcacagc gccggtcatt gccatgcccg caagcgccgc
     1441 gaaagcaaag ttgcgcgccc gcgtgagcag gcgtgcgggc gcggtcgcgg ccaagcctcc
     1501 aagcaggcgc acgtccatca ccgctatcgc gccagcgaaa aaggtaagcg agacgatgtg
     1561 cccgatattg gccgccgggt agagccatgt ggactggcgg atgctcgcgg cgaagcccga
     1621 ctgctcgaga gcaacgaaga gcgccggcgc cgcctcgatc atcagcgcat ctcgtaggtc
     1681 ttgccgttga ccgtgatccg ctcagcccgc atctcgtccg tttggaccgt cgacggatat
     1741 ccataggctg acacgttctg cccgacggcg acgacttttt ccgtcgctcc gcggctcgtc
     1801 atgcgcgatg taggcgcgag cgtcacggtc cagaccttgt cgcttgcctg caccgtgatt
     1861 gtggcgtgcg gattctcgaa tttcgaggtc acgatcggac cggcgacggt aatcggcttg
     1921 cccgcatcgt aactgcccca gccatggtgc gcgacggcgg cgctcgtcat cagtgcgaac
     1981 gccgaaacga acaggacagg tctcatcata gatgcctcca agagtcgctg ccgccccgga
     2041 ttgcctcgcc gacccgaacg ggcagatata cgggcgtcgt tgaagttcca acctaccgca
     2101 ccaccccgga aatgcagcac ggcttgcgtg ccggccgagt gatgcggttc ttgagaaagc
     2161 aaaccgcgga agatccgaca tagcctggcc ggacataagt ccaggcacga cacgcatcct
     2221 ccgcttcgca ggcggcttcg cagcttttgc cactcgagtc gtccggaact tcgaagtgac
     2281 ggtagtcgcc gccgttgcgg tcgacgccga actcggttgc tccgctcttg ggctcgataa
     2341 cgccggttcc gcgcacaccg gaggcgcagc acgccgcctc gaagcgtggc atgaccttgg
     2401 atttgagcca gcaaaccgcg ttggcattct ccgttgcggg atatgaaaag gcccaggccc
     2461 ggcagcgggc atcccgctcg caccgggcgg cgcattgggc cggatcgccc aatcgcatgg
     2521 gaaagctggc ataatcgcca cccgcccggt cgaag
//
LOCUS       DATCWM010000716         2209 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_539415, whole genome shotgun sequence.
ACCESSION   DATCWM010000716 DATCWM010000000
VERSION     DATCWM010000716.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2209
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_539415"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(299..1162)
                     /locus_tag="VIQ50_14115"
     CDS             complement(299..1162)
                     /locus_tag="VIQ50_14115"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY9361567.1"
                     /translation="MIDSSRRTVLTTGAAAAATAAAPQVLAQAPLASVPAGAKTGYYE
                     KGNVRIRYAEIGTGFPLLATPGGGLNSRIAVWANAVINIPEEFKNDFRVITMDQRNAT
                     GGESTGPVPVDDPWGAFADDQLGLMDHLGIRQFFFFGNCIGGPFAMKLMERAPQRVVA
                     ALLSQPVGHRPEQPDYMFNSGRDVWAKEFRERRGDVPMETIEKYLHSLYRVQPDFVYS
                     VSRDFAKSCQTPMLVLPDDVTAHPLQVSIDIASLAPNAEITVFPWKDPPELKARTINR
                     ARTFLKRHLPA"
     gene            1579..>2209
                     /locus_tag="VIQ50_14120"
     CDS             1579..>2209
                     /locus_tag="VIQ50_14120"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
                     /protein_id="HEY9361568.1"
                     /translation="MKRREFITLLGGTAAWPLAARAQQAPTAVIGFLGLTSQSEWGKF
                     VLALNNGLAETGYVEGRNLRIEYRWADGHYERLPAMAADLVRRKVDVIVTIAPPATLA
                     AKAATTAIPIVFFMGSDPVQHGVVASLNRPGGNITGVTVLANEIGVKRLELLREIAPG
                     SVAAGVIALLLNPTNQNAEPDARAARNAAAVVGQELAVVNAATDPEIDAA"
BASE COUNT          387 a          728 c          712 g          382 t
ORIGIN      
        1 gccgatctgg tcggcagcgc cgagagcctt gtgaaccgcg agaggtagct gccacttccg
       61 ctgtgggtca taagcagaca taacgccatc tttgagcgat gtccgctttg cccccgagag
      121 cagacatcga ccgcgctggc ggggcatgtc cgcttagtgc caaaaccggc cgtgagcaat
      181 cgcagcaacg cggcccctca ttctatccgt cagcgcgcag catgattgaa gcaaacgcgc
      241 ggcccgcccg aagggaagcg ctccgcgggc cacggtctac aaaacaatac gtcggggctt
      301 acgccggcag gtgccgcttc aggaaggtgc gcgcccggtt gatggtgcgg gccttcagct
      361 ccggcggatc cttccaggga aacaccgtga tctcggcgtt cggcgccagc gaggcgatgt
      421 cgatcgaaac ctggagcgga tgcgccgtca cgtcgtcggg cagcaccagc atcggcgtct
      481 ggcacgactt cgcgaagtcg cgcgacacgc tgtacacgaa atcgggctgt acgcggtaga
      541 ggctgtgcag gtatttctcg atcgtttcca tcggcacgtc gccccggcgc tcgcggaact
      601 ccttggccca gacgtcgcgt ccggagttga acatgtagtc cggctgctcc ggccggtgcc
      661 cgaccggctg gctcagcaac gcggcgacga cgcgctgcgg cgcgcgctcc atcagtttca
      721 tcgcaaacgg gccgccgatg caattgccga agaaaaagaa ctggcggatg ccgagatggt
      781 ccatcaggcc gagctggtcg tcggcgaacg cgccccaggg atcgtcgacc ggcaccgggc
      841 cggtggactc gccgcccgtg gcgttacgct ggtccatggt gatgacgcgg aagtcgttct
      901 tgaactcctc cgggatgttg atcaccgcgt tcgcccagac cgcgatgcgc gagttcaagc
      961 cgccgccggg cgtcgccaac agcggaaagc ccgtgccgat ctcagcgtag cggatgcgga
     1021 cgttgccctt ctcgtagtaa ccggtcttgg cacccgccgg cacgcttgcc agcggcgcct
     1081 gggcaagcac ctgcggtgcg gctgccgtcg ccgctgccgc ggcgcctgtt gtcaggacag
     1141 tgcgccggct tgaatcgatc atcgccttct tcccgtatcg ttgtcgcggg catgcgctcg
     1201 ccccgcggcc catcattgga ctgatagctt ccgggatccc ggtgggcttt agacactgta
     1261 acacaagctc tcgcggcgct ggccgtcggc ctggtcgccg cccattagtc ccccgatgat
     1321 ttcggcatat cccgcttcat ggacagccga tcgaaaccta gtcgaacttc tccggcagag
     1381 gaatgggtgt cacgctatgc cctagtcatg ttcaagtggg tcggaactcg atgcttcgac
     1441 gatgtccgcg catgtccaag cccgtagggc gcaataagcc aagcgcgttc cgccccggcc
     1501 gatctagctt gcctgcccat ggcaagctaa aggtgcacat cgagtggccg ccgcctaccc
     1561 gagaggaaag aaggccctat gaaacgacgc gagttcatca ctctgctcgg cggcacggcg
     1621 gcatggccgc ttgcggcgcg cgcacagcag gcacctacgg ccgtgatcgg tttcctcggg
     1681 ctcacctcgc agagcgagtg ggggaaattc gtcttggcgc tgaacaacgg cctggccgaa
     1741 accggctacg tcgaaggccg caacctcaga atcgagtacc gctgggcgga cggccactac
     1801 gagcggttgc cggccatggc ggccgatctc gttcggcgca aggttgacgt catcgttacg
     1861 attgccccac cggccacgct cgcggccaag gccgccacta cggccatccc gatcgtcttc
     1921 ttcatgggct ccgatccagt ccagcacgga gtggtcgcga gcctcaatcg gccgggcggc
     1981 aatatcaccg gcgtgactgt gctggccaat gagatcggag tgaaacgtct ggagctgctg
     2041 cgcgagatag cgccaggcag cgttgcggcc ggcgtgatcg cgctgctgct caatccgacc
     2101 aatcagaacg ccgagcctga cgcgcgcgcg gcgcgcaacg ctgccgccgt cgtgggacag
     2161 gagcttgccg tcgtgaatgc cgccacggac ccggagatcg acgcggcct
//
LOCUS       DATCWM010000717         3527 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_32357, whole genome shotgun sequence.
ACCESSION   DATCWM010000717 DATCWM010000000
VERSION     DATCWM010000717.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3527
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32357"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..652)
                     /locus_tag="VIQ50_14125"
     CDS             complement(<1..652)
                     /locus_tag="VIQ50_14125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018319709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEY9361569.1"
                     /translation="MSELLSNLWMGFQVAANPFNILFCLLGALVGTLVGVLPGIGTVA
                     TIAMLLPITFGLPPVGALIMLAGIYYGAQYGGSTTSVLVNIPGEATSVITCLDGHQMA
                     RQGRAGPALSIAAIGSFFAGCVATVLVAALGAPLTSIALLFGPAEYFSLMVLGLIFAV
                     VLAKGSVLKAVAMVVTGLLLSMVGSDLETGAGRMTFDFPELADGIGFANVAMGVFGF"
     gene            complement(668..1315)
                     /locus_tag="VIQ50_14130"
     CDS             complement(668..1315)
                     /locus_tag="VIQ50_14130"
                     /inference="COORDINATES: protein motif:HMM:NF018979.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HEY9361570.1"
                     /translation="MSEGVSPSPRGTRPGFAINTHNLIGGLIVAALALLFLGWAFYVP
                     NAVIPRILSAALLLVGIAAAIGIVPVHAPRDLYGGIALMMLATVALIASSDLPGQRGF
                     AFGPGTAPRLFSFVLAALGAAVALGGVFAEGPPIEKYRIRGPFFVIIAILAFAAMIRP
                     LGLVPATFLTFLISILGSTEMRWVESLIAAVVMTLFCVLLFVYLLNLPFQLWPRF"
     gene            1551..1937
                     /gene="ssrA"
                     /locus_tag="VIQ50_14135"
     tmRNA           1551..1937
                     /gene="ssrA"
                     /locus_tag="VIQ50_14135"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01849"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="alphaproteobacterial-type; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF01849"
     gene            2030..2593
                     /locus_tag="VIQ50_14140"
     CDS             2030..2593
                     /locus_tag="VIQ50_14140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008974507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor
                     SspB"
                     /protein_id="HEY9361571.1"
                     /translation="MAVDHIRYDILAQDALRGVVRRVLMDAAKNGLPGEHHFYISFDT
                     RAEGVRLSPRMLAQYPEEMTVVLQHQFWDLEVTENGFEVGVSFGGLPERLAVPFAAVK
                     GFFDPSVQFGLQFEEAAEAAGEHQPEQSAAGASNAPPAQHKAIAPAVAAVRVEPDPEA
                     ARTTAQGEADNSAAGGEVVQLDRFRKK"
     gene            3087..3272
                     /locus_tag="VIQ50_14145"
     CDS             3087..3272
                     /locus_tag="VIQ50_14145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4169 family protein"
                     /protein_id="HEY9361572.1"
                     /translation="MGDIVNLRNARKRAERQRAERTASTNRLLHGRSKAERQLEAERK
                     VKARRDLDRHRIETGDE"
     gene            3272..>3527
                     /locus_tag="VIQ50_14150"
     CDS             3272..>3527
                     /locus_tag="VIQ50_14150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HEY9361573.1"
                     /translation="MKSPVVKRSIVIAGHKTSVSLEDAFWKGLKEIAGGRDMTLSDLV
                     AAIDSERQHGNLSSAIRLFVLDFYRNQLSDHKTGREGPREL"
BASE COUNT          780 a         1101 c         1093 g          553 t
ORIGIN      
        1 caaagccgaa cacgcccatg gcgacattgg caaacccgat gccgtcggcg agctcgggga
       61 agtcgaaggt catgcggccg gcgccggtct cgagatccga gccgaccatc gagagcagca
      121 ggccggtaac gaccatggcg acggctttga gcaccgagcc cttcgccagc accaccgcga
      181 agatgaggcc caataccatg agcgagaaat attcggccgg cccgaacagc agcgcgatgc
      241 tggtcaaggg cgcgccgagc gccgccacca gcacggtggc cacgcagccg gcgaagaacg
      301 agccgatggc ggcgatggag agcgccggcc cggcgcggcc ctgccgcgcc atttgatggc
      361 cgtcgagaca ggtgatgacc gaggtggctt cacccggaat gttgaccagc accgaggtgg
      421 tcgagccgcc gtactgcgcg ccgtaataga tgcccgcgag catgatcagc gcgccgaccg
      481 gcggcaagcc gaacgtgatc ggcaacagca tcgcgatggt cgcaaccgtg ccgatgccgg
      541 gcagaacgcc gaccaaggtt ccgactagag cgccgagcag acagaagagg atgttgaacg
      601 ggttcgccgc gacctggaac cccatccaca gattcgagag cagttccgac atgacgtgtc
      661 cacccgctca gaagcgcggc caaagctgga acggcaaatt aagaagatag acgaacagca
      721 ggacgcagaa caaagtcatc accaccgcgg cgatcaagct ttcgacccac cgcatctccg
      781 tcgatccgag gatcgagatc aagaatgtga ggaatgttgc gggcaccagt ccgagcggac
      841 ggatcatggc cgcgaaggcg agaattgcga taatgacgaa gaagggaccg cgaattctgt
      901 acttttcgat cggtggcccc tcggcaaaga cgccgccgag cgcaaccgcg gcacccagcg
      961 ccgcaaggac aaaagagaac agccgcggtg ccgtgcccgg cccaaaggca aaaccgcgct
     1021 ggcccggcag atcggaggaa gcaatcaagg ccaccgtcgc cagcatcatc agcgcgatgc
     1081 cgccatagag atcccgcgga gcatgaaccg gcacgatgcc gatggccgca gcgataccga
     1141 ccagcagaag agcggcggac aaaattcgcg ggataacggc gttcgggaca taaaacgccc
     1201 aaccgaggaa caaaagcgcg agcgccgcaa cgatcagccc gccgatcaga ttatgcgtgt
     1261 tgattgcaaa gcccggacgc gtcccccggg gggacggtga tacgccctct gacatgttcc
     1321 ctcctggacg ccccgcacgg cgcgcctccc gaacctccca ttcgggtcag cacaacataa
     1381 tgggtagcac actccagtgg gccacgggaa gcaaccgatt tagctcaaag cagtcggtgg
     1441 gccggcgcac cgcgggctgc aacatcagcg cactgttgtc tcgggcacgc agagccgatg
     1501 ggcacccggc ttgcgaccgc gtgtccttgg gctcaatcgg cccgcttgct actctttttt
     1561 cattgaggtt ctgggcttat attaggaggt gccggcgcga gccggctatg gcgataaacg
     1621 gccgtcgtaa taaacctttc ggacccgggg gcagtacccg gcgcctccac caggggatca
     1681 gtggtcagaa gtcagaccac catcgaccgc tgactcctaa tccctgcagg gggcgaaata
     1741 ggatcgacga gggcgtaaag ggcgtgcttt tgctcggtat ggttccaccg ttatcgggcc
     1801 gcattcatag ttgccaacga caactatgct ccggttgccc aggccgcgta acgcggtttg
     1861 gaataccgaa ctgaagtcct gaggtcttag cagcttcagg cggggttcgg aggcacctgg
     1921 caacagaagc ctccacttcc atattctaag ctgcaatcga acgctggcgc atacgtggtc
     1981 gcgcacgcta gcattcgagc ggtgagtcca ccgcaaaccg gatccaccca tggccgtcga
     2041 tcacatccgc tatgacattc tggcccaaga cgccctgcgc ggcgtcgtgc gcagagtgct
     2101 catggacgcg gccaagaacg gtctgccggg agagcatcat ttctacattt ccttcgatac
     2161 ccgcgccgag ggcgtgcgcc tgtcaccacg catgctcgcg cagtatcccg aagagatgac
     2221 ggtcgtgctc caacatcagt tctgggacct ggaggtgacg gagaacggtt tcgaggtggg
     2281 cgtgtccttc ggcggcctcc cggaacgact ggccgtgccc tttgccgcgg tgaagggctt
     2341 cttcgatcct tcggtgcagt tcggtttgca gttcgaggag gccgccgagg cagccgggga
     2401 acaccaaccg gagcagagcg ctgcgggagc gagcaacgcg ccgccggcgc agcacaaggc
     2461 gatcgcacct gccgtcgccg cggtgcgggt cgagcccgat cctgaggcag cgcgaaccac
     2521 agcgcagggg gaagccgaca actcggcggc tgggggcgag gtcgttcagc tcgaccgctt
     2581 tcgcaagaaa taacgacgaa caagccaggc aaggaaatcc gccggagtct caatccctcg
     2641 cgcgccggcg gagcgtaaac gccgcgcaaa cagcgtcgtg ctgcatgcat ggcaggtaaa
     2701 tcttttgtga cgggcgcggc cgtccgtcgg cgcctcgcct gctcgggcga aaaatccgcg
     2761 ccattggaca gtgccgctaa gttttgccca attaaataac cagcaactcc attccggccc
     2821 gcagttttcg cactcacaat gctgtaagct cggaaactta atactaaata attcggagct
     2881 atgcttgaaa cgacgcttag atactgacgt aagacttgtg ggttcagcgc atagttgagt
     2941 tcgacggctc gctctttcgg ctttgtactt gccaggcgcg caatgctgga actcgcggca
     3001 cgccgcctcg ccacgctatg ggcgcatttg gctccgaagc cacggacaac gatcttcaat
     3061 ccccggagcg acttatcgag tgcgggatgg gtgacatcgt taaccttcgc aacgcgcgca
     3121 agcgcgccga acggcaacgg gccgaacgaa cggcatctac caatcgactg ctgcacggac
     3181 gcagcaaagc cgagcgccaa ctcgaagccg aacgcaaggt caaagcccgc cgcgacctcg
     3241 atcgccaccg gatcgaaacg ggagacgagt gatgaaatct ccggtcgtca aacggtccat
     3301 cgtcattgcc ggccacaaga ccagcgtcag cctcgaggat gcgttctgga aagggctcaa
     3361 ggagattgcc ggcgggcgcg acatgacgtt gtcggacctc gtcgccgcga tcgactcgga
     3421 gcgccagcac ggcaacctgt cgtcggccat acgtctgttc gtgctcgact tctaccgcaa
     3481 ccagctctcc gatcataaaa ccgggcgcga ggggccgcgc gagctga
//
LOCUS       DATCWM010000718         3801 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_469634, whole genome shotgun sequence.
ACCESSION   DATCWM010000718 DATCWM010000000
VERSION     DATCWM010000718.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3801)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3801)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3801
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_469634"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..476)
                     /locus_tag="VIQ50_14155"
     CDS             complement(<1..476)
                     /locus_tag="VIQ50_14155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEY9361574.1"
                     /translation="MQPSPDFDPVTAAKKLLREGRSGPLATLMPGSGDPYCSLVNVAT
                     AADGAPLLLISRLAVHTKNILADPRVSLMLDERKPGDPLQGARVMLMGTAATSDDPGV
                     RRRYLDRQPEADMFAGFADFAFYRMALKAVHLVAGFGRIVDLAPKQVLTETGDAAEL"
     gene            699..1400
                     /locus_tag="VIQ50_14160"
     CDS             699..1400
                     /locus_tag="VIQ50_14160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011155926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY9361575.1"
                     /translation="MPTIALVDDDRNILTSVSIALEAEGYRIMTYTDGASALDGFKTS
                     PPDLAILDIKMPRMDGMETLRRLRQKSDMPVIFLTSKDEEIDELFGLKMGADDFIRKP
                     FSQRLLVERVKAILRRSAPKDGSAPKETDAAKVLERGLLRMDPERHTCTWKNEPVTLT
                     VTEFLILQALASRPGVVKSRNALMDAAYDDQVYVDDRTIDSHIKRLRKKFKGTDDDFD
                     MIETLYGVGYRFKEM"
     gene            1988..3670
                     /locus_tag="VIQ50_14165"
     CDS             1988..3670
                     /locus_tag="VIQ50_14165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEY9361576.1"
                     /translation="MLLRGWQLFARVTFSSLSRRIIFLNVTGLLALVIGILYLSQFRA
                     GLIDARIQSLLVQGEIIAGAVAASAAVETDTNTMDPERLLDLQAGESYGPSEEALSGL
                     EFPINPERVAPVLRRLVSPTNTRARMYDRGGVLILDSRNLYDVLRFDLPPPTRKPGVL
                     ERVYVTIRTWFSRGTLPLYRELEPQNGKGYAEVGNALKGFKSSMVRINERGEVIVSVA
                     VPVQRFRAVRGALMLSTQGADIDNMVGAERVAIFKVFLIAAGVMVVLSFLLAGTIAGP
                     VRRLAESAQLVRRRIRSRVEIPDLGHRRDEIGHLSGSLRAMTDALYNRIEAIERFAAD
                     VSHELKNPLTSLRSAVETLPLAKTEDSRNRLLAVIQHDVKRLDRLISDISDASRLDAE
                     MQRQEAQPVNVAKLLTMVVSVANERHDDGVRVTLNFEGGRDSAFMVLGNDSRLGQVVD
                     NLIDNARSFSPAGGAVRVMCRRLRDEIEIIVDDDGPGVPEEAREKIFERFYTHRPHQP
                     FGQNSGLGLSISKHIIEAHGGRIRTENRQRPADAGETPVVLGARFIVRLPAM"
     gene            3670..>3801
                     /locus_tag="VIQ50_14170"
     CDS             3670..>3801
                     /locus_tag="VIQ50_14170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine kinase"
                     /protein_id="HEY9361577.1"
                     /translation="MAAETPTVHASAVLAGRRAVLIRGPAGAGKSQLALALLQAADTG
                     "
BASE COUNT          670 a         1257 c         1244 g          630 t
ORIGIN      
        1 agctcggcgg cgtcgccggt ctcggtcaga acttgcttgg gcgcgagatc gacgatgcgg
       61 ccgaagccgg caacgagatg caccgccttg agcgccatcc ggtagaaggc gaaatcggca
      121 aagcccgcga acatgtccgc ctcgggctga cggtcgagat atcgccggcg cacacccgga
      181 tcgtcgctcg tcgccgcggt gcccatgagc atgacacggg cgccttgcaa gggatcgccc
      241 ggcttgcgct cgtcgagcat gagcgacacg cgcgggtcgg cgagaatgtt cttggtatgg
      301 acggcaaggc gcgagatcag caagagcggc gcgccgtcgg cggcggtggc gacatttacc
      361 aacgagcaat aagggtcgcc cgaacccggc atcagggtcg ccaggggtcc cgagcggccc
      421 tcgcgcagca gcttcttggc ggccgtgaca ggatcgaaat cggggctcgg ctgcatttgg
      481 cgtctccggc aaaggatgtt accaagcgcc gccggctcag cgaagccggg aggaaaagct
      541 cgattttcgg cgcgccagct tgagcggggg catgatcgcc ggtgcgagct atgctagaaa
      601 ctccctgacg aatcatgcct ttgccaggga ttcgccacat ttcggccgtg ctttgggggc
      661 tttcaagtcc ccagggcgaa tgcagggatt aggggctcat gccgaccatc gctctcgtcg
      721 atgacgatcg caacatcttg acctcggtct cgattgcact cgaggccgaa ggttaccgga
      781 tcatgaccta taccgacggc gcttcggcgc ttgacggctt caagacgtcg ccgcccgatc
      841 tcgccattct cgacatcaag atgccgcgca tggacgggat ggaaaccttg cggcggctgc
      901 gccagaagtc cgacatgccg gtgatcttcc tcacctccaa ggacgaagag atcgacgagt
      961 tgttcggcct caagatgggc gccgacgatt tcatccgcaa accgttctcg cagcgtctcc
     1021 tggtggagcg cgtcaaagct atcctgcgcc gttcggcgcc gaaggacggt agcgcgccga
     1081 aggagaccga tgccgccaag gtgctcgaac gcggtctgtt gcgcatggac cccgagcgtc
     1141 acacttgcac atggaagaac gagccagtca cgctcacggt caccgagttc ctcatcctgc
     1201 aggcgctggc gagtcggcca ggtgtggtca agagccgcaa cgcgctgatg gacgcggcgt
     1261 acgacgacca agtctatgtg gacgatcgca cgatcgacag ccacatcaag cgcctgcgca
     1321 agaagttcaa aggcaccgac gacgatttcg acatgatcga aacgctctac ggcgtcggct
     1381 atcggttcaa agaaatgtga cgtcaggagc ggttaggcga ccgggctcga ccgcctagaa
     1441 tcggcgccgg cggggcccgc ggtgggggcg tgcaaccggc agaccgacag tgctcaatcg
     1501 aacgccggag agtttcaaga ccgacgtcgc gacgcaaggc ggcgacgcca aatcgtcgct
     1561 cgctgaaacc gcacgccggc tcggcgacct attgaaaagc tggtcgcgct cggtccgcgg
     1621 gattttttcg cgcgcctcga acgagagtca gatcggtctc gagccacggc cgctggatga
     1681 cgcggcgttc gccaagcggg ggcaccgcat ccatcgccta tggttgcaaa gccgctcgct
     1741 tgttcatcgc ctttcacttt cgagcctcgg ccgcagcgag cgagggcgcg agagcccgct
     1801 tgcgctggca agcacggcat tgcgccgatc cgtcgacctc gtctcgcaac actggcagcg
     1861 ctttgctcgc gcggccgcgt tcaatctgag ccaactcgat cgcacgctcg agagcctcaa
     1921 ggtcgagctg gagcggcgcg atgaccgcgc ctcgctcgcg acaaccggac gaaggcgctt
     1981 cgccgcgctg ttgttgcgcg ggtggcaact gttcgcgcgc gtcacctttt cgagcctgag
     2041 ccggcgaatc atcttcctca atgtgaccgg gctgctcgcg ctcgtgatcg gcattctcta
     2101 tctgtcgcaa ttccgcgccg gtctgatcga cgcgcgcatc cagagcctgc tggtgcaagg
     2161 cgagatcatc gccggcgccg tcgccgcctc ggccgcggtg gagaccgaca ccaacaccat
     2221 ggatcccgaa cggctgctcg acctgcaggc cggcgaaagc tacggcccct cggaggaggc
     2281 gctgtccggg ctcgaattcc ccatcaaccc cgagcgcgtc gcaccggtgc tgcgccgcct
     2341 cgtctcgccc accaacacac gcgcgcgtat gtacgatcgc ggcggcgttc tcattctcga
     2401 cagccgcaat ctctacgacg tgctgcgctt cgatttgccg ccgcccacgc gcaaacccgg
     2461 cgttctcgag cgcgtctacg tcaccatccg cacctggttt agccgcggca cgctgccgct
     2521 ctaccgcgag ctcgagccgc agaacggcaa gggctacgcc gaggtcggca acgcgctcaa
     2581 gggcttcaag tccagcatgg tgcgcatcaa cgaacgcggc gaggtgatcg tgtcggtcgc
     2641 ggtgccggtg cagcgcttcc gcgcggtgcg cggcgcgctc atgctctcga cccagggcgc
     2701 cgacatcgac aacatggtgg gcgccgagcg ggtcgccatc ttcaaggtgt tcctcatcgc
     2761 cgctggggtg atggtggtgc tgtcgttcct cctcgccggg acgatcgccg gcccagtccg
     2821 gcgactggcg gagagcgcgc agctggtgcg gcggcgcatc cgttcgcgcg tggagatccc
     2881 cgatctgggc caccgacgcg acgagatcgg acatctctcc ggctcgctgc gcgccatgac
     2941 cgacgcactc tacaaccgca tcgaggcgat cgagaggttc gccgccgacg tctcgcacga
     3001 gctcaagaac ccgctcacct cgctgcgctc ggcggtcgag acgctgccgc ttgccaagac
     3061 cgaagatagc cgcaaccggc tgctcgccgt catccagcac gacgtcaagc ggctcgaccg
     3121 gctgatctcc gacatttccg acgccagccg gctcgacgcc gagatgcagc ggcaggaggc
     3181 gcaaccggtc aacgtcgcca agctcctcac catggtcgtc agcgtggcca acgagcggca
     3241 cgacgacggc gtcagggtca ccttgaattt cgaaggcggc cgggattccg cgttcatggt
     3301 gttggggaac gattcccggc tcggccaggt ggtcgacaat ctgatcgaca atgcccgttc
     3361 gttctcgccg gcgggcggcg ccgtacgcgt catgtgccgg cgattgcgcg acgagatcga
     3421 gatcatcgtc gacgacgatg gacccggggt gccggaggaa gcgagggaga agatcttcga
     3481 acgcttctat acgcaccggc cgcaccagcc gttcgggcaa aattcgggcc tcgggctgtc
     3541 gatctccaag cacatcatcg aggcgcatgg cggccgcatc cggactgaga accggcagcg
     3601 tccggcagat gcgggcgaga cgcccgtcgt gctcggcgcg cgtttcatcg tgcggctgcc
     3661 ggccatgtga tggcggccga aactccgacc gtgcatgcct cggcggtgct ggcaggccgc
     3721 cgcgccgtgc tcatccgcgg gccggcgggt gcgggcaagt cgcaacttgc gctcgccctc
     3781 ctgcaggcgg cggacacggg g
//
LOCUS       DATCWM010000719         3340 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_134520, whole genome shotgun sequence.
ACCESSION   DATCWM010000719 DATCWM010000000
VERSION     DATCWM010000719.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3340)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3340)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3340
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134520"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            106..855
                     /locus_tag="VIQ50_14175"
     CDS             106..855
                     /locus_tag="VIQ50_14175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013528428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9361578.1"
                     /translation="MTQLRVSHLEVRYGDLIGVADVSLRVEEGTIVALLGSNGSGKTT
                     TLNAVAGLVRPSGGSIEWRGESIIRQPAYVVVAKGLALSPEGWRLFVSQTVEQNLRLG
                     ASVLVDKSRMAALFERVYAMFPRLAERRHQLAGTLSGGERQMLALGRALMSEPRLLML
                     DEPSLGLAPGVVEALYETLDRLHKEGLTLLLAEQSIPLALDIADYAYVLQTGRTVLEG
                     KGADLEKNEQVQEIYLGIATQPGAGDAPRPT"
     gene            complement(1069..2439)
                     /locus_tag="VIQ50_14180"
     CDS             complement(1069..2439)
                     /locus_tag="VIQ50_14180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2252 domain-containing protein"
                     /protein_id="HEY9361579.1"
                     /translation="MLYAAGHITQLPWGPRAERYGEGKRLRKKVPRERHADLLGSADR
                     DAVAILAAGDRTRVPDLIPVRYERMLASPFAFLRGAAAVMAEDLRHQPAAGIAVQACG
                     DCHLMNFGAFATPEENVVFDINDFDETLAGIDFTVDLKRLAASVAVAALAVKLPKDRA
                     RALAAACVEAYRSRMQVLAKLSPLEIWHSRIDLAWEIERIEDRALRQKLSAIVSKATG
                     HLEEDDNFPHLVKGKQARIEDRPPLIYHFTGKRNPRNRVDEKRVFASYQDGLAPERRC
                     LIERYALKDVAFKVVGVGSVGTFCAIGLFMSGDGAPLFLQIKEAGKSVLECLGPKFNA
                     HPGRRVVEGQRVMQTASDVFLGWTQDQGSGRYFYVRQLKNRHLGTVSELVEQRSLASY
                     ALLCGRTLARAHARSADPVVLAGYMGKGAVMDDALASFAMAYAQRTQRDYERLMAARG
                     PASKGR"
     gene            complement(2475..2837)
                     /locus_tag="VIQ50_14185"
     CDS             complement(2475..2837)
                     /locus_tag="VIQ50_14185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014889719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY9361580.1"
                     /translation="MAIVLDHTIVPAHDKEASARFLARILGLRYEGPLSHFAPLRIND
                     TLTLDFDNDTEFESHHYAFKVDEAEFDGIFARVRGEGIAYGSGPGALDDMKINHRHGG
                     RGFYFRDPNGHVLEVLTA"
     gene            complement(2949..>3340)
                     /locus_tag="VIQ50_14190"
     CDS             complement(2949..>3340)
                     /locus_tag="VIQ50_14190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361581.1"
                     /translation="KPRPVVLPRANVVYFAGNKTRQGERMKIIEIVPRARTRLYGTLV
                     AKEAAIRKSGRGTYVRVGRKSQRAARWKHKKFKGSLELNRGVSEAVTAKVRASTPEDE
                     RKLLSSFLGFVDRHAGDQVTSITIHYR"
BASE COUNT          592 a         1089 c         1049 g          610 t
ORIGIN      
        1 ccagggtcac gtgatcgccc acggcaaacc caatgaaatc gtcgccaatg aagcggtcat
       61 cgaggcctat ctgggccgcg ggcaccgaag gcgaaggaca atgccgtgac gcagttgcgc
      121 gtttcacatc tcgaggtacg ctacggtgat ctcatcggcg ttgccgacgt gtcgcttcgc
      181 gtcgaggaag gcaccatcgt tgcactgctc ggctccaacg gctccggcaa gacgacgacg
      241 ctcaatgccg tcgcgggtct ggtgcggccg agcggcggat cgatcgagtg gcgcggcgaa
      301 tcgatcattc gccagcctgc ctatgttgtc gtggcaaagg gccttgccct ctcgccggaa
      361 ggatggcggc tgttcgtgtc acagacggtc gagcaaaacc tccgcctcgg cgcctccgtg
      421 ctcgtcgata agtcgcgcat ggcggcgctg ttcgagcgcg tctacgcgat gtttcctcgc
      481 ctcgccgagc ggcgccacca actcgccggc acgctttcgg gcggcgagcg acagatgttg
      541 gcgcttggcc gggcgctgat gagcgagccg cggctcctca tgctcgatga gccgagcctc
      601 gggctcgcac cgggcgtggt cgaggcgctt tatgaaactc tcgaccggct gcacaaagag
      661 ggactgacct tgctccttgc cgagcagtcg atcccgcttg cgctcgacat tgccgattac
      721 gcctacgtgc tgcagaccgg ccgcaccgtg ctcgagggca aaggggccga tctggaaaag
      781 aacgagcagg tgcaggaaat ctatctggga atcgcaacgc agccaggcgc gggcgacgcc
      841 ccgcggccga cataaagcat gttccaatct ccctccgtca tgcccgcgca tcgcgcggcg
      901 gaagacgcgc gtgaacgcgc tttagtcgcg ggcatccacg tcttactggc cttaaatgaa
      961 gacgtggatg gcaccgggac tcgggcttgc ccgagtcccg caatgttgag cgccgcaagt
     1021 ctggtaaacc caacttgcgg tgacaagccc gaccatgacg ggttctcctc agcgcccttt
     1081 gctcgccgga ccccgcgccg ccatgagccg ctcgtagtcg cgctgggtgc gttgcgcgta
     1141 agccatggcg aatgacgcga gcgcgtcgtc catgacggcg cctttgccca tgtatcccgc
     1201 gagcaccacc gggtccgccg agcgcgcatg ggcgcgcgcc agcgtgcgtc cgcatagcag
     1261 cgcgtagctc gccagcgatc gttgctccac cagctcgctg accgttccaa ggtgccgatt
     1321 cttcagctgc cgcacgtaaa aatatcgtcc cgacccttgg tcttgcgtcc aacccaggaa
     1381 gacatcgctc gccgtctgca tgacgcgttg accttccacc acccgccggc cagggtgcgc
     1441 attgaacttc ggccccaggc actcgagcac ggatttgccc gcttccttta tttgcaggaa
     1501 caacggagcg ccgtcgccgc tcatgaatag gccgatggca cagaaggtac cgacgctgcc
     1561 gaccccgacg actttgaagg caacgtcctt gagcgcgtag cgctcgatga gacagcgccg
     1621 ctccggggca agaccgtcct gatacgaggc aaacacgcgc ttctcatcga cccggttgcg
     1681 cgggttcctc tttccagtga aatgataaat caacggcggg cgatcttcga tgcgcgcctg
     1741 tttgcccttc accaagtgcg ggaaattatc gtcctcttcg aggtgtccgg tggccttcga
     1801 cacgatggcg gaaagctttt gccggagcgc gcggtcctcg atgcgctcaa tctcccacgc
     1861 caaatcgatc ctgctgtgcc agatttccag cggcgacagt ttggcgagaa cctgcattcg
     1921 gctgcggtag gcttcgacgc acgccgccgc gagtgcccgc gcccggtcct tgggaagctt
     1981 gaccgccaat gccgcgacgg cgacgctcgc ggctaggcgc ttgaggtcca cggtgaaatc
     2041 gatccccgcc agcgtctcgt cgaaatcgtt gatgtcgaat acgacgttct cctccggcgt
     2101 cgcgaatgcc ccgaagttca tgagatggca gtcgccgcaa gcctgaacgg cgatgccggc
     2161 tgccggctga tgcctgaggt cctcggccat gaccgcggcc gccccgcgca ggaaggcgaa
     2221 cgggctagca agcatgcgtt cgtaacgcac cgggatcagg tccggcacgc gggtgcggtc
     2281 gcccgcggcg aggatggcga ccgcatcgcg atcggcggag ccgagcaggt cggcgtgacg
     2341 ctcgcgcgga acctttttgc gcagccgctt gccctccccg tagcgctcgg cgcgagggcc
     2401 ccagggaagc tgggtgatgt ggcctgcggc gtagagcatc gaatcgatcc ccactcgcgc
     2461 ggccggcgct cgagctatgc ggtcagcacc tcgagcacgt ggccgttcgg gtcacggaaa
     2521 tagaaaccgc gtccgccatg acggtgattg atcttcatgt cgtcgagcgc gcccggtccg
     2581 ctgccatagg cgataccctc gccgcgcacg cgcgcgaaga tcccgtcgaa ctcggcctca
     2641 tcgaccttga acgcgtaatg gtggctctcg aactccgtat cgttgtcgaa atcgagcgtc
     2701 agcgtgtcgt tgatccgcag cggagcgaag tgcgagagcg gaccctcgta gcgcaaacca
     2761 aggatacggg cgaggaatcg ggcggatgcc tccttgtcgt gcgccggcac gatcgtatgg
     2821 tcgagcacaa ttgccatcgg cacctccagc ggctggtcgt gccactcaca tgggacgcta
     2881 catcgccgat tttaagggca ccggcgagta gcgactcgtc ttgagaccgg cccatttcat
     2941 cgcggcgctc agcgataatg aatcgtgatc gaggtcacct ggtcgccggc atggcgatcg
     3001 acaaatccca gaaatgatga cagcagcttg cgctcgtcct ccggcgtcga ggcgcggacc
     3061 ttggcagtaa cggcctccga cacgccacga ttgagctcaa gcgagccctt gaacttcttg
     3121 tgcttccatc gagcggcgcg ctggctcttg cgcccgaccc gcacgtaagt tccgcggccg
     3181 cttttgcgaa tggcagcctc tttggcgacg agggtaccat agagccgtgt cctggcgcgc
     3241 ggaacgatct cgatgatttt catgcgttcc ccctgcctcg tcttgttgcc ggcgaaatat
     3301 acaacgttcg cacggggtaa gaccaccggg cgaggcttgg
//
LOCUS       DATCWM010000720         2557 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_193915, whole genome shotgun sequence.
ACCESSION   DATCWM010000720 DATCWM010000000
VERSION     DATCWM010000720.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2557)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2557)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2557
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193915"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..658)
                     /locus_tag="VIQ50_14195"
     CDS             complement(<1..658)
                     /locus_tag="VIQ50_14195"
                     /inference="COORDINATES: protein motif:HMM:NF013648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9361582.1"
                     /translation="MRGLPEIGRLTGRGNTANLEVVIAAKPDLIVDFGSVSDTYISLA
                     DRVQSQTAIPYLLIDGRFAHTLAAVRLLGGILGVNQRADQLAGRMEDILHDVDRVTAS
                     IPREARPRVYLARGTRGLETGNRGSINTEIIERVGAINVAEGGLQGGGLYNVSLEQVI
                     GWNPDTIVTVDPGVAEHIRSDPAWSQIHAVQQHRVFLSPRLPYGWIDAPPSLNRLIGV
                     Q"
     gene            complement(962..1324)
                     /locus_tag="VIQ50_14200"
     CDS             complement(962..1324)
                     /locus_tag="VIQ50_14200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015930329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEY9361583.1"
                     /translation="MADTRLSIRLDLTSGDRIGPGKIALLEAIQATGSISAAARRLGM
                     SYRRAWLLVDQINQALHQPAVTAAIGGRQGGGAALTASGKRVIELYRSIEQIAQSSAK
                     EEFRAVGRLLRKGGTLRA"
     gene            1529..2377
                     /gene="modD"
                     /locus_tag="VIQ50_14205"
     CDS             1529..2377
                     /gene="modD"
                     /locus_tag="VIQ50_14205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015687059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ModD protein"
                     /protein_id="HEY9361584.1"
                     /translation="MLTIPDDELRRWLAEDVPHGDLTTHALGIGSHHGRIRFEARQAM
                     VAACSEEAGRIMALAGADMIECVPSGTALQTSGLLLAAQGRAATLHAGWKVAQTLLET
                     AGGIAAAAQAIVEAVRQINSEVVVACTRKSLPGTRALSIKAILSGGEVPHRLGLSETI
                     LVFAQHRTFTGGASFPAIIDGLRRRVPEKKIVVEADTLAEAVAIADAGADIVQFDKAS
                     PAEIAALRRHCATRTPRPLVAAAGGIHAANAADYARAGADVIVTSSPYTARPLDVKVT
                     MEAMTS"
BASE COUNT          474 a          821 c          829 g          433 t
ORIGIN      
        1 actgcacccc gatcagccgg ttgagggacg gcggcgcgtc gatccagccg tacgggagtc
       61 gaggactgag gaacacgcga tgctgttgca cggcgtggat ttgggaccat gccggatcgg
      121 atcgaatatg ttccgcgacc cccggatcga cggtcacgat ggtatccggg ttccagccga
      181 tgacttgttc cagcgagaca ttgtaaagac ctccgccttg caggccgccc tcggcgacat
      241 tgatggcgcc cacacgttcg atgatctccg tattgatcga gccccggttg ccggtttcca
      301 gcccgcgggt gccgcgggcg aggtagacac ggggccgtgc ctcgcgcggg atggaggcgg
      361 taacgcgatc gacgtcatgc aggatgtcct ccatgcgccc ggcgagttgg tcggcgcgct
      421 gattaacccc gaggatgccg ccgagaagcc gcaccgcggc cagcgtgtga gcgaagcggc
      481 catcgatgag caggtaggga atcgcggtct ggctctgcac gcggtcggcg agcgagatat
      541 acgtgtccga aaccgacccg aagtcgacga tcagatcggg ctttgcggct atcacgactt
      601 cgaggttggc cgtattgccg cgcccggtga ggcggccgat ttccggcaag ccccgcacga
      661 ccggcggaag ataggaaagc tcctcgggcg gcggctttcg gttccagccg actaatttct
      721 cggcgcaagc atggtcatga gcaccgaggc cggcggaccc gctgcgatga cccgctcgat
      781 ccggtcgggc acttcgacct ggcgcccggc cgaatcgacc accagcctcc cggccgtcgc
      841 cggcaagaag gcaagagtgg cgagtatgcc tgcgcacgcc agccgaatcg aagccgcgct
      901 cagcctgctt gccggcaacg ccttgagaaa atcgcgcgcg gatcgcctgg cacgtcgcgc
      961 atcaggcgcg cagcgtgcct cccttccgga gcaacctgcc cacggcccga aattcctctt
     1021 tggccgagga ctgtgcgatc tgctcgatgg aacgatagag ctcaatgacc cgcttgccgc
     1081 ttgccgtcag agcggcgccc ccgccttggc gaccaccgat tgccgcagtg accgcaggtt
     1141 ggtgcaaggc ttggttgatc tgatcgacta gcagccacgc ccgccgatac gacatcccga
     1201 ggcggcgcgc cgccgcggaa attgagccgg ttgcttgaat ggcctcgagc agtgcaatct
     1261 tgcctgggcc gatgcgatcg ccgctcgtca aatcgaggcg aatgctcaaa cgggtgtcgg
     1321 ccatggacgc gctgcgcctg cgacgatggc gaccagacca ccgcgaatgc atggccttcg
     1381 tcaagaggtc ttgcccggac gctccgacgc ggcggcaatc caggcctcgc tctcatctca
     1441 cgcaccatgt tgcgcaggaa atccgaagta ttccatcata tagagcggtg cgccggcctg
     1501 acaacaggag aaaggcggat caaccgacat gctcaccatt cccgacgacg aacttcggcg
     1561 atggctcgca gaggatgtgc cgcacggcga cctcaccacc cacgcgctcg ggattggcag
     1621 ccaccacggc cgcatcaggt tcgaagcgcg ccaagccatg gttgcggcct gcagcgagga
     1681 ggcgggccgc attatggcgc tcgccggcgc cgacatgatc gagtgcgtgc cctcgggcac
     1741 ggcgctacaa accagcggat tgctgctggc agcccaagga cgagctgcaa cgctgcatgc
     1801 gggctggaag gtcgctcaga ccttgctcga aaccgccggc gggattgccg ctgccgcaca
     1861 ggcgatcgtc gaagccgtgc ggcaaatcaa ttccgaagtc gtcgtcgcat gtacgcgcaa
     1921 gagccttccg ggcacgcggg ctttgtcgat caaggccatt ctcagcggcg gcgaggtccc
     1981 tcatcgcctc ggtctgtccg aaaccatact cgtatttgcc caacatcgga catttaccgg
     2041 tggcgcatcg ttcccggcga tcatcgatgg cctgcggcgg cgcgtacccg aaaagaagat
     2101 cgtggtggag gcggatacgc tcgccgaggc ggtggcgatt gcggatgccg gtgccgacat
     2161 cgtgcagttc gacaaggctt cgccggctga gatcgccgcg ctgcggcgcc actgcgcgac
     2221 ccgcacgccg cgtcctctcg ttgccgccgc gggagggatc cacgctgcga acgctgccga
     2281 ctacgcgcgc gcgggggcgg acgtgatcgt cacgtcgtcg ccgtataccg ctcgtccgct
     2341 ggacgtaaag gtcacgatgg aggctatgac tagctgacaa ttccctgttg ctcggcaccc
     2401 cgatatattt catgatatat agcgagcaga cggcatgaca cccaccccgg ccaagtgatt
     2461 ggacgcaatt gccaggtgaa gctcggtatt gctgatgctt atggacgaac ggcgcgagag
     2521 cgactgggca atttatccgt cggtacgata cgcacag
//
LOCUS       DATCWM010000721         3882 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_539480, whole genome shotgun sequence.
ACCESSION   DATCWM010000721 DATCWM010000000
VERSION     DATCWM010000721.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3882
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_539480"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..566
                     /locus_tag="VIQ50_14210"
     CDS             <1..566
                     /locus_tag="VIQ50_14210"
                     /EC_number="6.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006700273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cobaltochelatase subunit CobN"
                     /protein_id="HEY9361585.1"
                     /translation="AEGEGRSDGGFAKQVANADLLLHPSNDPTRDLLEGAEDVAHISG
                     FAAAAASLGRAPDFVVLDTTNPELPRARTLPQALARIVRGRATNPRFIEGMMRHGARG
                     AAELAETVDRLVDFAETTGAVSSTLFDLVHEAYLADPRVREFLLQENPEAAQAIADRL
                     EAARRKGLWHPRRNDTALTEIRAEAVP"
     gene            563..1819
                     /gene="cobG"
                     /locus_tag="VIQ50_14215"
     CDS             563..1819
                     /gene="cobG"
                     /locus_tag="VIQ50_14215"
                     /EC_number="1.14.13.83"
                     /inference="COORDINATES: protein motif:HMM:TIGR02435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016709 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen, NAD(P)H as one donor, and incorporation
                     of one atom of oxygen [Evidence IEA];
                     GO_process: GO:0019250 - aerobic cobalamin biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-3B synthase"
                     /protein_id="HEY9361586.1"
                     /translation="MIALHARGACPRLAEPMQTGDGLLARIVTAGPIPLDSFAGLCAA
                     AKAHGNAVMEISARGSLQMRGLTPGSAPLFASAVAALDIELCDGVAVISNPLADDPIA
                     PVDADALAASLRRAIVARVLELAPKVSVVIDGGRRLHLDALTADLRLRAIDTGQGTKL
                     HVALAGDAVSAALLGVIALDDAIDAAISILALIASRGPAARAADLLQSEGIDIFNEAV
                     GNRMENAAPLPRRLSVEPIGLHRLSGKRCAIGVALAFGQASADNLMAFAALAQANGAI
                     WARPAPGRALLLGPIDEMTGFVLATAADSLGFVVDGRDPRRRIVACPGAPACASGLIE
                     SRAIATELADNLPPSRDGIAVHVSGCAKGCAHAGTASLTIVGTARGCGIVRNGTARAT
                     PQCYIDPGDLIAEALRASQPRETVDA"
     gene            1812..2444
                     /locus_tag="VIQ50_14220"
     CDS             1812..2444
                     /locus_tag="VIQ50_14220"
                     /EC_number="5.4.99.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018011668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016993 - precorrin-8X methylmutase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-8X methylmutase"
                     /protein_id="HEY9361587.1"
                     /translation="MLKQDYLRDGTAIYERSFAIIRAEADLSRFTHEEGDIAVRMIHA
                     AGQVEVSGLIEFAPGFVSAARNALRGDAPILCDSEMVAHGITRARLPAKNEVICTLRD
                     PKVPELAAKLGTTRSAAALELWRDRLDGALVAIGNAPTALFRLLEMIESGAPKPAAII
                     GIPVGFVGAAESKEALAANPNGVPYLIVRGRMGGSAMTAAAVNALAKEGL"
     gene            2441..3169
                     /locus_tag="VIQ50_14225"
     CDS             2441..3169
                     /locus_tag="VIQ50_14225"
                     /EC_number="2.1.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006203264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030788 - precorrin-2
                     C20-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-2 C(20)-methyltransferase"
                     /protein_id="HEY9361588.1"
                     /translation="MTTGRLIGVGVGPGDPGLLTLNAIAALNAADVTAHFAKAGNASN
                     ARTIASKHFKPGVEELSLLYPVTTEIPKEDASYRETLRVFYDSAAASIAAHLDQAKVV
                     AVIAEGDPLFYGSYMHLHVRLAPRYPTEVVAGVTGMSGCWSAIGEPIAQGDDVFTVLP
                     GTLPEYELERRLADADAAVVMKIGRHLAKVRRALDRAGRLERAIYVERGTMTNAAVMP
                     LIDKLETYAPYFAIVLVPGWEARP"
     gene            3166..>3882
                     /locus_tag="VIQ50_14230"
     CDS             3166..>3882
                     /locus_tag="VIQ50_14230"
                     /EC_number="2.1.1.131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011655351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-3B C(17)-methyltransferase"
                     /protein_id="HEY9361589.1"
                     /translation="MSGKLAIVGLGPGDDRYLTREALDALAEAEALYGYGPYLDRVPP
                     REGQSRHASDNREEAARARAAVSHAAAGANVAIVSGGDPGVFAMAASVCEEIASGPDA
                     WRALDVAIIPGITAMLAVAARAGAPLGHDFCALSLSDNLKPWELIERRLDAAAPAGFV
                     IALYNPVSRARPLQLGKAFARLARHLPGATPVIFGRAVGRPDESLTVTTLAHAGDTPA
                     DMATLIIVGSRDTRVIAREGR"
BASE COUNT          599 a         1369 c         1235 g          679 t
ORIGIN      
        1 gcgccgaagg cgagggcaga tccgatggcg gcttcgctaa gcaagtggca aacgccgatt
       61 tgctccttca ccccagcaac gatccaaccc gcgatctgct cgaaggcgca gaggacgtgg
      121 cgcatatcag tggatttgca gccgcagccg cctcgctcgg ccgtgcgccg gatttcgtcg
      181 tgctcgacac caccaacccg gagctgccgc gggcccgcac ccttcctcag gcgctcgccc
      241 gcatcgtgcg cggccgcgcc accaatccgc gcttcatcga gggcatgatg cgccatggtg
      301 cgcgcggcgc ggcagagctt gccgagaccg tggaccgact ggtcgatttc gccgagacca
      361 ccggcgcagt ctcgagcacc ctgttcgatc tcgtccacga ggcttatctc gccgacccca
      421 gagtgcgcga gttcctgctg caggagaacc ccgaagcggc acaggcgatc gccgaccggc
      481 tcgaggctgc gcgccgcaaa gggctgtggc acccgcgccg caacgatact gctctcacgg
      541 agattcgcgc ggaggcggtg ccatgatcgc gctccacgcg cgtggcgcct gtccccgcct
      601 ggcagagcca atgcagaccg gcgatggcct gctggcgcgc atcgtgacgg ctggaccgat
      661 tccgctcgat tccttcgccg gcctctgcgc cgccgcaaaa gcacacggca acgcggtgat
      721 ggagatcagc gcgcgcggca gcctgcagat gcgcgggctc actcccggtt ccgcgccgct
      781 gtttgcctcg gccgtcgcag ctctcgacat cgagctttgc gacggtgtgg ctgtaatctc
      841 aaatccactt gccgatgacc caatcgcgcc ggttgatgcc gacgcgctcg ccgcatcgct
      901 tcgccgcgcc atcgtagcgc gtgtacttga gctggctccg aaagtttccg tggtgatcga
      961 cggcgggcgc cggcttcatc tcgatgcgct aaccgccgat ctccgcctcc gtgcgattga
     1021 tacggggcag ggaaccaagc ttcacgtcgc gcttgcgggc gatgccgttt cggcggcact
     1081 gctcggtgtt atcgcgctcg atgatgccat tgatgccgcg atatccatcc tcgcgctgat
     1141 cgcctcgcga ggacctgccg cgcgcgcggc cgatttgctg caaagtgaag gcatcgacat
     1201 cttcaacgag gctgttggaa atcgcatgga gaatgcggct cccttgcctc ggcgccttag
     1261 cgtggagccg atcgggctgc acagactgag cggcaagcga tgcgcaatcg gcgtggccct
     1321 cgccttcggc caggcctcgg ccgacaacct gatggccttt gccgccttgg ctcaggcaaa
     1381 tggtgcaatc tgggcgaggc ctgctccagg tcgcgccctt ctccttgggc ctatcgacga
     1441 gatgaccggc tttgtgctcg caacggcggc ggatagccta ggctttgtgg tggatgggcg
     1501 cgacccgcgc cgccgcattg ttgcttgccc cggcgctcca gcatgcgcat ccggattgat
     1561 cgagtcccgc gcgattgcga cagagctcgc ggacaacctg ccgccttccc gcgacggcat
     1621 cgccgttcat gtctccggtt gcgccaaagg ttgcgcccat gctggcactg cctctctcac
     1681 catcgtcggc acggccaggg gctgcggcat cgttcgcaac ggcaccgcgc gcgcaacgcc
     1741 gcagtgttac attgatccgg gcgatctcat cgccgaggct ctgcgcgcgt cacagccgag
     1801 ggagaccgtc gatgcttaag caggactatc tccgcgacgg caccgccatc tatgagcgct
     1861 ccttcgccat cattcgcgcc gaggccgacc tctcgcggtt cacccacgag gaaggcgaca
     1921 tcgccgtccg catgatccat gccgcaggcc aagtcgaagt ctccggcttg atcgagtttg
     1981 cccccggctt cgtgtcggcg gcccgtaacg cgctgcgcgg cgacgcgccg atcctgtgcg
     2041 actccgagat ggtcgcccat ggcatcaccc gcgctcggct ccctgccaag aatgaggtga
     2101 tctgcacgct gcgcgatccc aaagttcccg agctcgccgc gaagcttggc actacgcgct
     2161 ctgccgcagc gctcgagctg tggcgcgaca gactcgacgg cgctctcgtc gccatcggca
     2221 atgcgccgac cgctttgttc cgcctgctcg aaatgattga gtctggcgcc cccaagccgg
     2281 cggcgatcat cggcatccct gtcggcttcg tcggcgccgc cgagtcgaag gaagcactcg
     2341 cggcaaatcc caatggcgtg ccctatctca tcgtgcgcgg gcggatgggc ggcagcgcca
     2401 tgacggcagc ggcggtcaat gcgctagcca aggagggcct atgaccacag ggcgtctcat
     2461 cggcgtcggc gtcggtcccg gcgatcccgg gctgctcacg ctgaatgcca tcgccgcgct
     2521 caatgcggcc gacgtcaccg cccatttcgc caaggccgga aacgcgagca acgcccgcac
     2581 tatcgcgagc aagcacttca aaccgggagt cgaggagctg tcgctgcttt atcccgtgac
     2641 gaccgagatc ccgaaggagg atgcttcgta tcgcgagacg ctgcgcgtat tctacgacag
     2701 cgcggcggct tcgatcgccg cgcatctcga ccaggccaaa gtggtcgcgg tgatcgccga
     2761 gggtgatccc ttgttctacg gctcttacat gcatctccat gtgcggcttg ccccgcgcta
     2821 tccgaccgag gtggtcgccg gcgtgaccgg catgtccggc tgctggtcgg cgatcgggga
     2881 gccgatcgcg cagggcgacg acgtgttcac cgtgcttccc ggcaccttgc ccgaatacga
     2941 gcttgaacgc cgcctcgccg atgccgatgc cgccgtggtg atgaagatcg gtcgtcatct
     3001 cgccaaggtg cgccgcgcgc tcgaccgcgc cggccgtctg gaacgcgcca tctatgtcga
     3061 gcgcggcacc atgaccaacg ccgcggtgat gccgctcatc gacaaactcg agacctatgc
     3121 gccttatttc gctatcgttc tggtgccggg ctgggaggcg cggccgtgag cggcaagctt
     3181 gcgatcgtcg ggctcggccc tggcgacgac cgttacctta cgcgcgaggc gctcgatgcg
     3241 ctcgccgaag ctgaagcgct ctacggctac gggccttatc tcgaccgcgt tccgccgcgc
     3301 gaagggcaat cgcggcatgc ctcggacaac cgggaggaag cagcacgcgc ccgcgccgct
     3361 gtgagccacg ccgctgccgg cgccaacgtc gccatcgtct caggcggaga ccccggcgtg
     3421 ttcgcaatgg cggcttcggt gtgcgaggag attgcttcag ggcctgatgc ctggcgcgcg
     3481 ctcgatgtgg cgatcatccc cgggatcacc gccatgcttg cggtcgccgc gcgagccggc
     3541 gcgccgctcg gccacgattt ctgcgcgctg tcgctgtcgg acaatctcaa gccttgggag
     3601 ctcatagagc gccgcctcga tgccgctgcc cccgccggct tcgtcatcgc cctctacaat
     3661 cctgtctcgc gcgcgcggcc gttacagctc ggcaaggcct tcgcgcggct tgcccgccat
     3721 ctgccgggag cgacgccggt cattttcggc cgcgcagtag gccgccccga cgaaagcctc
     3781 acggtaacca cgctcgctca cgcaggcgac acgcctgccg acatggcgac gctcatcatc
     3841 gtcggctcgc gcgacacccg cgtcatcgcc cgcgaggggc gc
//
LOCUS       DATCWM010000722         3558 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_539491, whole genome shotgun sequence.
ACCESSION   DATCWM010000722 DATCWM010000000
VERSION     DATCWM010000722.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3558
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_539491"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1416)
                     /locus_tag="VIQ50_14235"
     CDS             complement(<1..1416)
                     /locus_tag="VIQ50_14235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit alpha"
                     /protein_id="HEY9361590.1"
                     /translation="MRGGEAVAAGLPPAHGLYDPTLEKDSCGVGFITDIKGKKSHKLI
                     EDALAILCNLEHRGAVGADPRAGDGAGILVQIPHKFFAKNAERLGFSLPKPGEYAVGA
                     LFMPRDPDWRQVIRDIYSQMIKREGMTLLGWREVPTDNSTLGESVKPTEPVHLQVFIG
                     RSKKIKSEAEFERRLYILRKSISNAIYTRKERRLSGYYPVSISCRTVVYKGMFLADQL
                     CTYYPDLHDKDFESALALVHQRFSTNTFPTWSLAHPYRMIAHNGEINTLRGNVNWMAA
                     RQASVSSALLGEDINKLWPISYEGQSDTACFDNALEFLVQGGYPLAHAVMMMIPEAWA
                     GNPLMDEERRAFYEYNAALMEPWDGPAAIAFTNGRQIGATLDRNGLRPARYFVTRDER
                     IIMASEMGVLPIPEKDIVTKWRLQPGKMLLVDLDEGRLIPDEELKAALAKSHPYKEWL
                     ERTQIVLEDLPPAPSEAALSNL"
     gene            1988..3043
                     /locus_tag="VIQ50_14240"
     CDS             1988..3043
                     /locus_tag="VIQ50_14240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-eliminating lyase-related protein"
                     /protein_id="HEY9361591.1"
                     /translation="MNFASDNAAAIAPELLAAISRANEGAALGYGQDVWTRRVEERFA
                     EVFAREVAVFLVPTGTAANALALAHLTPPWGAVLCHHEAHIATDECGAPEFYGGGIKL
                     VGLPGEAGKIAPDTLQHALRAASWGGPHHVSPTLLSLSQATEAGAIYRPDEIRALAEI
                     AHAHGMSVHVDGARIANALARMNASPAQATWMVGVDVLSFGATKGGAMAAEAVIFFDS
                     ARGAHMPERRKRAGHLLSKHRFLAAQMEAYLADGLWLKLARHANAMAERLAAGLAAAQ
                     RLPVWPVEANEVFVALPSRLDARLKAEGASYYPWTTESLPKGVVLERDATLVRLVTSF
                     ATSPEEVDRFVELARAP"
     gene            3158..>3558
                     /locus_tag="VIQ50_14245"
     CDS             3158..>3558
                     /locus_tag="VIQ50_14245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361592.1"
                     /translation="MKHRVLLCAGIAALALLASRPGLAQPVPPAYHGAVFPGEALPPH
                     EAVTIVSSTGLEPVGRPVRQGPVYALRAVDPAGEEVRVIVDAYLGRIVKVIPLSGPRY
                     AMPLLRAPYGRPPRPTAMVPGDEFDDFTSVGP"
BASE COUNT          572 a         1164 c         1180 g          642 t
ORIGIN      
        1 gagattcgat agcgccgcct cgctcggcgc gggaggcaga tcctcgagca cgatctgtgt
       61 gcgctcgagc cactccttgt aggggtggct cttggcgagc gcagccttga gctcttcgtc
      121 tgggatcagg cggccctcgt caagatcgac gagcagcatc ttgcccggct gcaggcgcca
      181 cttcgttaca atgtccttct cggggatggg cagcacgccc atctcggaag ccatgatgat
      241 gcgctcatcg cgagtgacga agtaacgcgc cggacgcagg ccgttgcggt ccagcgtggc
      301 gccgatctgc cggccgttgg tgaacgcgat ggcggcggga ccgtcccagg gctccatcag
      361 cgcggcgttg tactcgtaga acgcgcgccg ctcctcgtcc atgagcggat ttcccgccca
      421 tgcttcaggg atcatcatca tcaccgcgtg cgcaagcggg tagccgccct gaaccaggaa
      481 ctcgagcgcg ttgtcgaagc aggcggtgtc ggattgcccc tcgtaagaga tcggccacag
      541 cttgttgatg tcttcgccca acagcgcgga tgatactgag gcttggcgcg ccgccatcca
      601 gttgacgttg ccgcgcagcg tgttgatctc gccgttgtgg gcgatcatcc ggtacggatg
      661 ggcgagcgac cacgtcggga aggtattcgt ggagaaacgc tggtgcacga gcgcgagcgc
      721 gctctcgaaa tccttgtcgt ggagatcggg ataataggtg cagagctggt cggccaggaa
      781 catacccttg tagacgaccg tgcggcagga gatggatacc gggtaatagc cggagagtct
      841 gcgctccttg cgggtataga tcgcgttcga gatcgacttg cgcaggatgt agaggcgccg
      901 ctcgaactcc gcctcgctct tgatcttctt gctgcggccg atgaacacct gcaaatgcac
      961 gggctccgtc ggcttgaccg attcgcccag cgtcgagttg tctgtcggca cctcgcgcca
     1021 gccgaggagc gtcatgccct cgcgcttgat catctgggaa tagatgtcgc ggatcacctg
     1081 ccgccagtcg ggatcgcgcg gcatgaacag cgcgccgacc gcatattcgc cgggcttcgg
     1141 caggctaaag ccgaggcgct ccgcattctt ggcgaagaac ttgtgcggga tctgcaccag
     1201 aatgccggcg ccgtcgccgg cgcgcggatc ggcgccgacc gctccgcggt gctcgaggtt
     1261 gcacaggatg gcgagcgcat cctcgatgag tttgtgcgat tttttgccct tgatatcggt
     1321 aatgaagccg acgccgcagg aatccttctc gagcgtggga tcataaagcc cgtgtgcagg
     1381 cggcaggccc gcggccacgg cttcgccacc gcgcagcgca ggccggcgcc gcgcagtccc
     1441 ctgacccgct cccgttgcgc gcttgcgtgc cgcgcccata tcgtcctcgc gtcctacccc
     1501 ggcgcaaacc gccaagaagg gtgtacttct tggcgcatca ttcgctcccg cagcgccgat
     1561 cggcgttgcg gcctcaaggg caccgctggt cattggcggc cttttcgcta tcgcgcttgg
     1621 ctgaggcgca cggccgctcg tcttaggcag cgccgcgaac gcgcgatggc ccgcttctca
     1681 ccgttcgatg aaggccggat gacaaaccgg ccgggatcga gcggtcgcca actgggacag
     1741 caatactgac ctactctacc tttgccaaat tctaatcatg aaggcaaggg ttcgcctatc
     1801 gagaaaatgg tctttcgcgc gaaagtttcc tcccagcgca caaaaagacc ggatcgtctt
     1861 gcggccgtat cgtccgtgat ctccgcgcgg cgtgtgagcg ctggtttctg cgaggcatga
     1921 tgatgctgcc acaggtcgcg cagcgcgctg cgcttttgcg cgggccgtag tgacgccgag
     1981 agggcgcatg aacttcgcaa gcgacaatgc agccgccatc gccccggagc tcctcgccgc
     2041 tatttcgcgg gcgaacgaag gcgcggcgct cggctacggg caagacgtct ggaccaggcg
     2101 cgtcgaggag cggtttgccg aggtgtttgc gcgggaagtc gcggttttcc tggtgccaac
     2161 cggaaccgcg gccaacgcgc tcgcgctcgc gcatctcacg ccgccctggg gcgccgtgct
     2221 ctgccatcac gaggcgcaca tcgcgacgga cgaatgcggc gcgccggagt tctatggcgg
     2281 tggaatcaag ctcgtgggcc ttcccggtga agccggcaag atcgcgcccg acacgttaca
     2341 acatgcgctg cgcgcagcgt cgtggggcgg cccgcatcac gtcagtccga cgctgctgtc
     2401 gctctcgcaa gccaccgaag caggcgcgat ttaccggccg gacgagatcc gcgcgctcgc
     2461 cgagatcgcc catgcgcatg gcatgtcggt gcacgtcgac ggcgcgcgca tcgccaacgc
     2521 gctcgcgcgc atgaatgcgt cgccggcgca agcgacctgg atggtgggtg tcgatgtcct
     2581 atcgttcgga gcgaccaaag gcggcgcgat ggccgccgaa gccgtgatat ttttcgattc
     2641 cgcccgaggc gcacacatgc cggagcgacg taaacgggcc gggcatctcc tctccaagca
     2701 tcgcttcctc gccgcgcaaa tggaggccta tctcgccgac ggcctgtggc tcaagctcgc
     2761 gcgccacgcc aacgccatgg cggagcggct ggcagccgga ttggccgccg cgcagcgcct
     2821 cccggtgtgg ccggtcgagg cgaacgaggt gttcgtcgcg ttgccgtcgc gcctcgacgc
     2881 gcggctcaag gccgaaggcg cgagctatta cccgtggacg acggagtccc tgccgaaggg
     2941 cgtcgtgctc gagcgcgatg cgacgctcgt gcgtctcgtc acgtcctttg ccacctcccc
     3001 cgaggaggtc gatcgcttcg tggaactcgc ccgcgcgccg tgatgccacg ccgacgccca
     3061 agctacgccc tattcccggc tatggttgcg gggagccgag cacgtcgctt tgcctgatcg
     3121 tggctcgaac gccggtaata ggatcggggg tcgtgtcgtg aaacaccgag ttctactttg
     3181 cgcgggcatc gccgcattgg cgctgctggc gtcgcggcca gggctggctc agccggtgcc
     3241 gcctgcgtac cacggcgcgg tctttccggg cgaagcattg ccgccgcatg aggccgtgac
     3301 catcgtgagc tcgaccggac tcgagccggt cggccgcccc gtacgccaag gcccagtcta
     3361 cgcgttgcgc gcggtcgatc cagccggcga ggaagtccgc gtcatcgtcg atgcctacct
     3421 gggccgcatc gtcaaagtca tcccgctgag cggaccgcgt tacgccatgc cgctgctgcg
     3481 ggcgccgtac gggcggccac cgcggccgac ggccatggtt ccgggtgacg aattcgatga
     3541 tttcacgtcg gtcggccc
//
LOCUS       DATCWM010000723         2043 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_523580, whole genome shotgun sequence.
ACCESSION   DATCWM010000723 DATCWM010000000
VERSION     DATCWM010000723.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2043
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_523580"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..410
                     /locus_tag="VIQ50_14250"
     CDS             <1..410
                     /locus_tag="VIQ50_14250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010683414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY9361593.1"
                     /translation="NMLTRRLSALVDAGLLERRRYSERPPRDEYVLTARGRDFRPILV
                     ALLAWGNKHFAPEGPSVLLVDRNTGAAVEPILVDSATGRPIKEPEYAFAPGPAARERI
                     RRRYASSDRPPVSTAFRPLPLSEKGRARKRSAR"
     gene            407..1843
                     /locus_tag="VIQ50_14255"
     CDS             407..1843
                     /locus_tag="VIQ50_14255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017957231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEY9361594.1"
                     /translation="MSVTALNVAPGTANVAQAPAVELSPRTRLLLQGPIVPTLLRMAW
                     PNVLVMFAQAATGLIETWFVAKLGTDALAGMALVFPGVMLMQMISAGAMGGGISSAIA
                     RALGAGRREEADALVMHALVISVALGAAFSTIMLLFGRPIYRALGGEGGELEAAVSYS
                     NVVFAGNVLLWAMNGLANVIRGTGNMLIPASVICVGVVVLVPLSPLLIFGVGPFPALG
                     IAGGGVALVSFYAAGAAVLGWYVISGRNVARLRMSRLRWPLFREILQVGAVAAVTSLQ
                     TNVIIALATALVATAAGAGAAAGYGTGARLEYLLIPIVFGLGAPLVALVGTNIGAGQR
                     ERALRIAFVGAAIAFAITEAIGIAAALWPHLWITQFSADPQVIEVGTMYLRLVGPSYG
                     FFGLGLALYFASQGAGRLFWPLSAGFIRMLSAIGGGWIALALTGSLQWLFAALAFGLF
                     LQGSVLFAAIASGAWFRHSRGGLCDARP"
BASE COUNT          292 a          656 c          683 g          412 t
ORIGIN      
        1 ccaacatgct gacgcgccga ctcagtgcgc tggtggacgc gggtctgctg gagcgccggc
       61 gctacagcga acggccgccg cgcgatgaat atgtgctgac cgcgcgcggg cgcgattttc
      121 gtcccatcct ggtcgcgctg ctggcatggg gaaacaagca ttttgcgccg gaggggccga
      181 gcgtgcttct ggtcgatagg aataccggtg ccgccgtcga gccgattctc gtcgatagtg
      241 cgaccgggcg cccgatcaaa gagccggaat acgccttcgc ccccggtccg gccgccaggg
      301 agcgcatccg gcgaaggtat gcatcgagcg atcgtccgcc ggtgtcgact gcttttcgtc
      361 cgttgccatt gagcgagaaa ggccgagccc gcaagaggag cgcgagatga gcgtcacggc
      421 gctcaacgtc gcgcctggca cggcgaacgt cgcgcaagcg ccggcggtcg agctcagccc
      481 ccgaacgcgc ctgctgctgc agggcccgat cgttcccacc ttgttgcgga tggcctggcc
      541 caatgtcttg gtgatgttcg cgcaggccgc aaccggtctg atcgagactt ggttcgtcgc
      601 caagctcggc accgatgcgc tggcgggcat ggcactggta tttcccggcg tgatgttgat
      661 gcagatgatt tccgccggcg cgatgggcgg cggcatttcg tctgcaatcg cgcgggcgct
      721 cggcgccggc cggcgcgagg aagcagacgc gctggtgatg cacgcgctcg tcatcagcgt
      781 cgcgcttggc gccgcgttct cgaccatcat gctgttgttc ggccggccga tctatcgcgc
      841 gctcggcggc gaaggcggcg aactcgaagc ggcggtcagc tattccaacg tcgttttcgc
      901 cgggaacgtg ttgctctggg cgatgaacgg cttggccaac gtcatccgcg gcaccggcaa
      961 catgttgatc ccggcctcgg tcatttgcgt cggcgtcgtt gttctcgtgc ccttgtcgcc
     1021 gctgttgatc ttcggcgtcg gcccgtttcc ggccctcggc attgccggag gcggcgtcgc
     1081 gctggtgtcg ttctatgccg cgggagccgc cgtgctcggc tggtacgtca tctcggggcg
     1141 caatgttgcg cgcttgcgaa tgtcccgcct gcgctggcct ctgttccgcg agatccttca
     1201 ggtcggagcg gtggctgcgg tcacgtcgct acagacgaac gtcatcatcg cgcttgccac
     1261 ggcgttggtc gccaccgctg ccggagccgg cgccgcggcc gggtatggca ccggcgcgcg
     1321 gttggaatat ctgctgatcc ccatcgtttt cggactaggc gccccgctgg tggcgctggt
     1381 gggtacgaac atcggtgccg gccagcgcga gcgggcgctg cgcatcgctt tcgtcggcgc
     1441 cgccatcgcg ttcgccatca ccgaggcaat cggcatcgcc gcggcgctct ggccacactt
     1501 gtggatcacc cagttcagcg ccgatccgca ggtgatcgag gtgggcacga tgtatctgcg
     1561 cttggtcggt ccaagctacg gctttttcgg tttggggctt gcgctctact tcgcctcgca
     1621 gggagcggga cggctatttt ggccattatc cgccggcttc atacgcatgc tgtctgcgat
     1681 cggcggcggg tggatcgcgc tcgcgctcac cggctcgctg caatggttgt tcgccgcgct
     1741 cgccttcggc ctgttcctgc agggaagcgt cttgtttgca gccatcgcct cgggcgcgtg
     1801 gtttcgacac tcccgcgggg gactttgtga tgcacggcca tgacctcgct ctaagatcat
     1861 ctgcgcgagc atccggccat cgaagaccga ccattgcgca agagggcgcc aataacagca
     1921 attcatataa agcctagatc gtcgccaaaa tctatcaccg catcgcagtc ggcgaagcgg
     1981 gaatcggaga tttctcacca ccgtcctcca aacggcgggc atagctacgc ttgctgccgg
     2041 ttg
//
LOCUS       DATCWM010000724         4718 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_134612, whole genome shotgun sequence.
ACCESSION   DATCWM010000724 DATCWM010000000
VERSION     DATCWM010000724.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4718
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134612"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..216)
                     /locus_tag="VIQ50_14260"
     CDS             complement(<1..216)
                     /locus_tag="VIQ50_14260"
                     /inference="COORDINATES: protein motif:HMM:NF021423.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2125 domain-containing protein"
                     /protein_id="HEY9361595.1"
                     /translation="MTDSGFRSAPPRRRRWLLFVPFAVVVVLAAVWTCVWFYAANRAE
                     ADLAALRQRERQAGRTQICTSQSIGGYP"
     gene            347..925
                     /locus_tag="VIQ50_14265"
     CDS             347..925
                     /locus_tag="VIQ50_14265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003839 - gamma-glutamylcyclotransferase
                     activity [Evidence IEA];
                     GO_function: GO:0061928 - glutathione specific
                     gamma-glutamylcyclotransferase activity [Evidence IEA];
                     GO_process: GO:0006751 - glutathione catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase"
                     /protein_id="HEY9361596.1"
                     /translation="MDPNPLHAAEDLWVFAYGSLMWRPDFPFVERVEARLVGAHRALC
                     VYSFVHRGTPERPGLVLGLDQGGTCRGVAYRVSAAERASTITYLRAREQVTSVYRECI
                     RPIWLKREPEQRVSALCYMVDRGHPQYAGRLTLEQQLHHVRQGHGQSGANRDYVIATV
                     GALEQLGYRETGLHLLAERLAGTHEALVATAP"
     gene            complement(951..1715)
                     /locus_tag="VIQ50_14270"
     CDS             complement(951..1715)
                     /locus_tag="VIQ50_14270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEY9361597.1"
                     /translation="MLVIRSLLFNFLFYLNLLVQIIAALPTLLMPRWAIIAVARFWAR
                     SNLWLLRAVCGINAEFRGLGKIPAGPLLVSSKHQSLWETFALLLILPDAAYIMKRELM
                     WIPFFGWYAWKAGMIPIDRSRGSRALADMNACARRELARNRPIIIFPEGTRRPPGAEP
                     SYKYGVARLYSQMGVPCLPIALNSGLFWPRRSIRRYPGTIVVEVLDPIPPGLGQESFF
                     QRLQHEVEDATARLISEGKRERTHNRASDASLASSS"
     gene            complement(1842..2528)
                     /locus_tag="VIQ50_14275"
     CDS             complement(1842..2528)
                     /locus_tag="VIQ50_14275"
                     /inference="COORDINATES: protein motif:HMM:NF014724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEY9361598.1"
                     /translation="MPTVEFDTENGAAGMPRSTERSSPSALLRRLGWSALALCAAAAL
                     SIGLGFVWFVRHVPSEEVSLNRDADGIVALTGGASRITDAIELLASGRGKRLLISGAN
                     RATNSKEISRLNPEFERWVRCCVDFDRSLNTLGNAVETRRWAESRDFRSLIVVTSNYH
                     MPRALAEIAHQLPDVMLVPFPVVTDRQRAEQWWVDWATTRRMVIEYVKFLFTKLRIAL
                     SPDAGTRATG"
     gene            complement(2597..3571)
                     /locus_tag="VIQ50_14280"
     CDS             complement(2597..3571)
                     /locus_tag="VIQ50_14280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012454858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9361599.1"
                     /translation="MSTTDARMAAGEKPNSPAALLAQTLSRFETPIVPRATISARALI
                     AIIAIMTFLASLTTGVVMLVRAAANEWQADVAREFTIQIRPVAGHDIEMEVVKAAVIA
                     RASAGIAEVRPYSKEETTRLLEPWLGSGLQIDDLPVPRLIVVRITPGAAPDLAQLRQT
                     LAEQIPGVSLDDHRGFVDRMRAMTRAVVVLGIGVLLLVLAATVLSLAFATRAAIATNR
                     PVIEVLHLIGAKDSFIARHFQQHFLRLGLEGGLIGSGSAIALFALAELAGGWFGSGPA
                     GEQLSALFGTASIGMPGYLAMLAQAGVIACVTAATSRYMVSRTIETIH"
     gene            complement(3558..4217)
                     /gene="ftsE"
                     /locus_tag="VIQ50_14285"
     CDS             complement(3558..4217)
                     /gene="ftsE"
                     /locus_tag="VIQ50_14285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HEY9361600.1"
                     /translation="MVRFEHVGLRYGLGSEVLRDLTFRIDPRSFQFITGPSGAGKTSL
                     LRLLFVSLRPTRGLVTLFGHDIAMLSKDALATLRRRIGIVFQDFRLLDHMTTFENVAL
                     PLRVIGHAEESYRDEVIELLNWVGLGDRISALPPVLSGGEKQRAAIARAVIARPQLLL
                     ADEPTGNVDPNLARRLLRLFIELNKSGTSVVIATHDIALMDQVDARRLVLHEGRLHVY
                     D"
     gene            complement(4412..>4718)
                     /locus_tag="VIQ50_14290"
     CDS             complement(4412..>4718)
                     /locus_tag="VIQ50_14290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4175 family protein"
                     /protein_id="HEY9361601.1"
                     /translation="LDALRRGAQNLAQSMQQQGMLGPGPNGQPGRLGLPRAQQDTDPL
                     GRPLRGRDYGDDTTVKVPGEIDVQRARRILEELRRRFGENFRPQLELDYIERLLRDF"
BASE COUNT          894 a         1521 c         1535 g          768 t
ORIGIN      
        1 cggatagccg ccgatcgatt gcgaggtgca gatttgcgtc cggccggcct gccgttcgcg
       61 ctgccgcaac gccgccagat cggcctcggc gcgattggcc gcgtagaacc acacacacgt
      121 ccagaccgcc gcaagcacca cgacgacggc gaacggcacg aacagcagcc agcgccgacg
      181 ccgcggcgga gccgagcgga agccggagtc ggtcatctac atgctcctcg acgtagcggc
      241 atgccggcca gagtttgcgc cctcctcaaa cggcggtgcc gggttcatgg ccggtgcgca
      301 cggcttgcgg cttgcgtcca atggcggatt cctcgatatc acatccatgg acccgaatcc
      361 tttgcacgcg gcggaagatc tctgggtgtt tgcctatggc tcgctgatgt ggcggccgga
      421 ttttccgttt gtcgagcggg tcgaggcgcg gctcgtcggc gcgcatcgag cgctctgcgt
      481 ctattcgttc gtccaccgcg ggacgcccga gcggccgggt ctcgtgctcg gtctcgatca
      541 gggcggaacc tgtcgcggcg tcgcttatcg tgtatcggcg gccgaacgcg ctagcaccat
      601 cacctatcta cgcgcgcgcg agcaggtcac ctccgtctat cgcgagtgta tccgtccgat
      661 ctggctcaag cgcgaacccg agcagcgcgt atcggcgcta tgctatatgg tcgaccgcgg
      721 gcatccgcaa tatgccggcc gacttacgct cgagcagcag ttgcatcacg tgcgccaagg
      781 gcacggccaa tccggcgcga accgcgacta tgtcatcgcc acggtcgggg cgctggagca
      841 gctcgggtat cgcgaaaccg gcttgcatct cctcgccgaa cggctcgcgg gcacacatga
      901 agcgctcgtg gctacggcgc catgacgtga tacgacgacg cgcggtcgcg tcaagatgat
      961 gaggcgagtg aagcgtcgct cgcacgattg tgggtacgct cgcgcttgcc ctcgctgata
     1021 aggcgcgcgg tggcgtcttc gacctcgtgc tgcaaccgct ggaagaagct ctcttgccca
     1081 agacccggcg ggatcggatc gagcacctcg actacgatgg tcccgggata gcggcgtatc
     1141 gagcgccgcg gccagaacaa gccggaatta agcgcgattg gaaggcacgg aacgcccatc
     1201 tgggaataga gccgcgccac gccgtacttg taactgggct cggcgccggg gggccggcgg
     1261 gtgccttccg gaaaaatgat gatcggacga ttgcgcgcga gctctcgccg ggcgcatgcg
     1321 ttcatgtccg ccagggcccg cgaccccctg ctgcgatcaa tcggaatcat gccggccttc
     1381 caggcgtacc agccaaagaa cggaatccac atcagctcac gcttcatgat gtacgcggcg
     1441 tccggcaaga tcagcagcaa cgcgaacgtc tcccacagcg actggtgctt ggaggagacg
     1501 agcagcggcc cggccggaat ttttcccaga ccgcggaatt cggcgttgat gccgcacacg
     1561 gcccgcaaca gccaaagatt gctgcgggcc caaaatctgg ccacggcgat gatcgcccag
     1621 cgcggcatca gcagcgtcgg cagcgccgca atgatctgca cgagtaggtt gaggtagaac
     1681 agaaagttga agaggagaga gcgaatgacg agcacgggca cgatccaatt tccccgccgc
     1741 cggggccggc aggagcggcc ttcagaggta acgcgagatc ggggcgggtg atcttaccac
     1801 tggccgcgcg ggcaaccagg gcggaagtcc cgcttcgcga cctagcccgt cgcgcgagtg
     1861 ccagcatcgg gactcagcgc gatgcgaagc ttcgtgaaaa gaaattttac atactcgata
     1921 accatccgcc gcgtcgtcgc ccagtcgacc caccactgtt ctgcacgctg gcgatccgtc
     1981 accaccggaa agggcacgag catcacgtcg ggcagttgat gcgcgatctc ggcgagcgcc
     2041 cgcggcatat gatagttcga cgtcacgacg atcagcgagc ggaaatcccg gctttccgcc
     2101 cagcgccggg tctcgaccgc gttgcccagc gtgttgaggg agcgatcgaa atcgacgcag
     2161 cagcgcaccc aacgctcgaa ttcgggattg agacgggaga tttccttgga gttggttgca
     2221 cggttagcgc cgctgatgag aagccgcttg ccgcgccccg acgccaacag ctcgattgcg
     2281 tcggtgatac gcgaagcgcc gccggtcaat gcaacgatgc cgtcggcgtc gcggttgagc
     2341 gagacctctt ccgacggaac gtgccgcacg aaccaaacaa agccaagccc gatcgatagc
     2401 gccgccgcag cgcagagcgc gagtgccgac cagccgaggc gccgaagcaa ggcagatggg
     2461 ctggaccgct cggtcgatcg aggcatcccg gcggctccat tctcggtatc aaattcgacc
     2521 gtcggcatct cttctccagt tgggcaggat agcgcaaaat ccggccgccc ggtggcataa
     2581 ggctgcgcgc aatcggctaa tgaatcgttt cgatggtgcg gctgaccatg tagcgtgagg
     2641 ttgcagcggt gacgcaggcg atgacgccgg cttgcgccag cattgccaaa tagcccggca
     2701 ttccgatcga cgcagtaccg aataaggcgg acaactgctc gccggcgggc cctgaaccga
     2761 accagccgcc ggcgagttcg gccagcgcga aaagtgcgat ggcgctgccg ctgccgatca
     2821 atccaccctc caatcccaat cgcaggaaat gctgctggaa atgtcgtgcg atgaaactgt
     2881 ccttcgcgcc gatgagatgc agcacctcga tcaccggccg gttggtcgcg atggcggcgc
     2941 gggtggcaaa ggcgagcgag agcacagtgg cggccaacac gagcaacagg acgccgatgc
     3001 cgaggacaac gactgcgcgg gtcatcgcgc gcatccggtc gacgaagccg cgatgatcgt
     3061 cgagactcac ccccgggatc tgctcagcga gcgtttggcg cagttgcgcc aaatccggtg
     3121 cggcgccggg cgtgattcgc accacgatca ggcggggaac cggcaagtca tcgatctgaa
     3181 gtccgcttcc cagccacggc tcgagcaggc gcgtcgtttc ttccttggaa taaggtcgca
     3241 cttcggcaat cccggcagag gcgcgggcga tgaccgctgc cttgacgacc tccatctcga
     3301 tgtcgtgacc ggccacaggc cggatctgga tcgtgaactc gcgcgccaca tcggcttgcc
     3361 attcattcgc tgcggcgcgc accagcatga ccacgcccgt ggtcagcgag gcgaggaagg
     3421 tcatgatggc gatgatggcg atcagggcgc gagcggaaat cgtcgcccgc ggcacgattg
     3481 gcgtttcgaa gcgcgacagt gtctgcgcca agagcgcggc tggcgagttc ggcttctcgc
     3541 ccgctgccat tctcgcgtca gtcgtagaca tgcagacggc cctcgtgcag cacgaggcgg
     3601 cgcgcgtcga cctggtccat gagcgcgatg tcgtgggtgg cgatgaccac ggaagtgccc
     3661 gatttgttga gctcgatgaa tagccgcaac agccgcctcg ccaaattcgg atcgacattg
     3721 cccgtgggct cgtcggcgag gaggagttgc ggccgcgcga tcaccgcccg cgcgatcgcg
     3781 gcgcgctgct tctctccacc cgaaagcacc ggcggcaggg cggagatgcg atccccgagc
     3841 ccgacccaat tcaaaagttc gatgacttcg tcgcgatagc tctcttccgc atgtccgatt
     3901 acccgcagcg gtaaggcgac gttctcgaag gtcgtcatgt ggtcgagtag ccggaaatcc
     3961 tgaaacacga tgccgatgcg tcgccgcagc gtcgcgagcg cgtccttgct gagcatggcg
     4021 atatcatggc cgaacagcgt cacaaggcct cgagtgggcc gcagcgaaac gaagaggaga
     4081 cgcaagagcg aggtcttgcc agcgcccgac ggcccggtga tgaactggaa cgaacgcgga
     4141 tcgatgcgga aggtgagatc gcgcagcacc tcggagccga ggccgtaacg cagtcccaca
     4201 tgctcgaatc ggaccaccct gcctctcccc ccgagagcga tgcccgccga caggaaccgc
     4261 gcggcctagg ctgggcgcct tgatttgcga attcgttaac cgcccccggc tgcggtcaag
     4321 ccggcgcctt gaacggacaa aagatcgctc cgcgcagccc aggggaggca gaagccctgc
     4381 gtttggcctc cgggatcccg ccttcagctc gttagaaatc ccgtagcagc cgttcgatat
     4441 agtcgagctc gagctgcggg cggaagttct cgccgaagcg gcgccgcaat tcctcgagga
     4501 tgcgacgcgc gcgttgcacg tcgatctccc ccggcacctt caccgtggtg tcgtccccgt
     4561 agtcgcgccc gcgcaagggc cgacccagcg ggtcggtatc ctgttgcgcg cgcggcagcc
     4621 ccagcctacc gggttggcca ttgggaccgg gacccaacat tccctgctgc tgcatggatt
     4681 gggcgaggtt ctgcgcgcct cgacgcaacg cgtcgagc
//
LOCUS       DATCWM010000725         7221 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U7411
            k141_134952, whole genome shotgun sequence.
ACCESSION   DATCWM010000725 DATCWM010000000
VERSION     DATCWM010000725.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955223
            Sequence Read Archive: SRR350692
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:07:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,825
            CDSs (with protein)               :: 2,825
            Genes (RNA)                       :: 9
            tRNAs                             :: 8
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 11 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7221
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134952"
                     /isolate="SMAG_U7411"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.45 N 92.4 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(10..966)
                     /locus_tag="VIQ50_14295"
     CDS             complement(10..966)
                     /locus_tag="VIQ50_14295"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY9361602.1"
                     /translation="MRTFRLAFAVVALLALGGQAGWAQPQQTIRIIIPFPPGGATDIV
                     GRLLADQISRTQGVSAIVENRPGAGSVIGTEAVARAAPDGNTLLMPANFFVINRIVHK
                     LSYDPLSFEPICVLVRAAHVVTVNSTSPYRTLGDYLAAARAQPGALTNASVGPATAQH
                     IALEMLKRAANVDITFVPFSGNVPAINALLGGHVTSAIVNYPEVAEQVKSGKLRALAT
                     TLLARLEETPDVPTVAESGFPEFETETWIGLVAPPKTPQGAAAQLAAWAISALQIPEV
                     KAKLLAMGMSPVGLCGADFAAYLRKQHDEYDRVIRAANIKVD"
     gene            1167..2720
                     /gene="hpnR"
                     /locus_tag="VIQ50_14300"
     CDS             1167..2720
                     /gene="hpnR"
                     /locus_tag="VIQ50_14300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008169 - C-methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0019746 - hopanoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hopanoid C-3 methylase HpnR"
                     /protein_id="HEY9361603.1"
                     /translation="MKVLFVHPGPLLYTNVFLRLEPLGLELVAEAARRAKHSVRLLDL
                     QVETHADYHRMLAEWQPDFIAFSCNYLANVPEIVDLAKAAKCTLPRAFICVGGHSASF
                     TATAILEHGEGAIDCVLKGEGEVGIVKLLEAVAGDRGAVAKVPGAVTADGEGPRPGFV
                     EHLDEIRPGRDLVRKRHKYFIGVLDPCASIEFSRGCPWDCSFCSAWTFYGRSYRLLSP
                     ERVIDDLASIREPGLFIVDDVAFVQQRHGFAIGEAIARKGIRKNFYLETRGDVLLRHK
                     EVFQFWKKIGLTYIFLGLEAIDEDGLRKYRKRIPLGRNFEALEFARSLGVEVAINIIA
                     DPDWDEERFRVLREWCMNVPEVVNISINTPYPGTETWLTEQRRLQTRDYRLFDIQHAV
                     LPTKLPLAEFYRELLHTQRVLYRKHMTWWTAPVLAGVLARNLLRGQTNFMRGIMNYNK
                     VYNAEKMLSDHARPVHYELPLPPRTPVDSRDAKASQLYIHAPRGRAGRSIDDSTERFV
                     EATRMGTST"
     gene            2972..4441
                     /locus_tag="VIQ50_14305"
     CDS             2972..4441
                     /locus_tag="VIQ50_14305"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY9361604.1"
                     /translation="MELQCWRSPQPSAPGYLIDRFLQSAPFVSLFLCAVLLAAWLGGL
                     GPGLFATGLAILAFDYFFIPPVLSVELGVQGGLRLALFAVAALIVVWISAAQRRTAES
                     LRRARDDLRATVAELRRSETYLAEAQRLSNTGSFGWKIGTDKIIWSKETYRIMGFDET
                     VRPTIGLLLQRVHPDDRGYVQRQLDRAVRGEVHFDYEYRLKMPDGEIKDIHVRARRQG
                     DETGEEELVGALMDVTAAKRAQEALQVAQTALAHVTRVTMLGEMTTSIAHEVNQPLGA
                     IVTNAGASLRWLGRQPPEIEEVRTAIGQIVNDAHRANEVIRRIRKFSKNVDPEMIRLD
                     INEVVEEAVTLLRHDALRHGVAIRLEFAPDLLPVRGDRIQLQQVIVNLLINGMEAMAT
                     LRERERVLVVRTQRQADGVLVAIEDAGVGIKPENADRLFSAFYTTKPDGLGMGLSIVR
                     SIIEAHGGRVWAAPNAGPGMTFQFTLSADARHQRASAHQ"
     gene            complement(4499..4993)
                     /locus_tag="VIQ50_14310"
     CDS             complement(4499..4993)
                     /locus_tag="VIQ50_14310"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEY9361605.1"
                     /translation="MPILAAGGIVLRDGSRPRIAIVRLRRDKSWVLPKGKLYPGEPAL
                     VGAKREVFEETGHQVSVHGFLGSMLYSVDGRMKIVQFWHMRVIGGPMREPMDDIKAVK
                     WLSLKQAIEMLSRTHEKVFLANVGPVVLKAARESVRGKSSKPWVHNQRKRRAQGAQIA
                     ATAH"
     gene            5740..5901
                     /locus_tag="VIQ50_14315"
     CDS             5740..5901
                     /locus_tag="VIQ50_14315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361606.1"
                     /translation="MDRKPIVSTDCLVDVTYICEWCGMETKRAVREQAKRPHALTGSR
                     NDLSRNVGR"
     gene            6179..6580
                     /locus_tag="VIQ50_14320"
     CDS             6179..6580
                     /locus_tag="VIQ50_14320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008130824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9361607.1"
                     /translation="MSRIRMQLFAFACAVLLVTPAAVTRTYAQQAAMPQDSFLLTVFL
                     KHDQSKTLDQINEQLKHQDYYKKFPPPGVEIVSWYVMMGIGQVVTLRVPANRLRDVNR
                     AIEQSAWGAYRTEFYPTYDFKPVAEEQRKTQ"
     gene            complement(6615..>7221)
                     /locus_tag="VIQ50_14325"
     CDS             complement(6615..>7221)
                     /locus_tag="VIQ50_14325"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEY9361608.1"
                     /translation="ARGIDPARREPMPSAPPQPDSDTVFVTVVDRDRMAVSLINTLFS
                     NFGAGICTQETGITLTDRGACFVLDPGHPNAFGPNKRPMHTIIPALGFRGGRCELAFG
                     VMGAHYQPMGHAQIVTNVIDYGMDVQAAIDGPRAFFVEETSVVERGLPRTSVEGLGAR
                     GHEVELAPRPWGGAQAIRIDWERGVLIGGSDPRKDGCALGY"
BASE COUNT         1321 a         2313 c         2240 g         1347 t
ORIGIN      
        1 gtgccgccgc tagtcgacct tgatattggc cgcacggatg acgcgatcgt attcgtcatg
       61 ctgcttgcga agataggcgg caaaatcggc gccgcacagc ccgaccggag acatgcccat
      121 tgcaagcagc ttggccttga cctcggggat ctgcagggcg gagatggccc aagcggcaag
      181 ctgagccgcg gcaccttgcg gcgtctttgg cggcgcgaca aggccgatcc aggtctcggt
      241 ttcgaactcg gggaaaccgg attcggcgac ggtcggcacg tccggtgtct cttcaagccg
      301 cgcaagcaaa gtcgtcgcca gcgcccgcag cttgccggac ttcacctgct cggcaacctc
      361 cggatagttg acgatcgccg aggtgacatg ccctcccagc agcgcattga tcgccggcac
      421 attgccggaa aatggcacga aggtgatgtc cacgttcgcc gcgcgcttga gcatttcgag
      481 ggcgatatgt tgcgccgtgg cgggaccgac gctggcgttg gtcaacgcgc cgggctgcgc
      541 gcgtgcagcg gccaaatagt cgcccagggt gcggtaaggc gacgtgctgt tgacggtcac
      601 gacatgcgcg gcccgcacca gcacacagat cggctcgaag ctgagtgggt cgtagctgag
      661 cttgtgcacg attcggttga tgacgaagaa gttcgccggc atcaacagcg tgttgccgtc
      721 cggcgcggcg cgggcaacgg cctcggttcc gatcaccgag ccggcgccgg gcctgttctc
      781 cacgatcgcc gacacgcctt gcgtgcgact gatctgatcg gccagcaggc ggccgacgat
      841 gtccgtcgcg ccgcccggcg ggaacggaat gatgattctg atggtctgct ggggctgtgc
      901 ccacccggct tggccgccca gcgcgagcag cgcgacgacg gcgaaagcca gccggaatgt
      961 gcgcatgcgc tagaccctct tgcgtgcgca atccgagcat ctttggctcc gagccacaac
     1021 agggtcaggg gaacttggcc acggcgccac ggcttatttc cttcaattcg gtcgccgtcg
     1081 acccaatgcc caggccgacg ggccttgacc cgcgcgtcgc ggatcgcgag agtcccctcc
     1141 tcctctccgc cgggccgcag gttcccatga aggttctatt cgttcatcct ggcccattgc
     1201 tctacacgaa tgtcttcctt cggctcgagc cgttgggtct cgagctcgtg gcggaagcgg
     1261 cccgccgcgc caagcactcc gtccggctcc tcgatttgca agtcgagact catgccgact
     1321 accaccgcat gctcgccgaa tggcaaccgg atttcatcgc cttttcttgc aactacctcg
     1381 ccaacgtgcc ggagatcgtc gatctggcga aggctgcgaa atgcactctg ccgcgggctt
     1441 tcatctgcgt cggcggccac agcgcctcct tcaccgccac ggccattctg gaacatggcg
     1501 agggcgcgat cgactgcgtg ctcaagggcg aaggcgaggt aggcatcgtc aagctcctcg
     1561 aagccgtggc cggcgaccgc ggcgcagtcg ccaaagtgcc cggcgcggtc acggcggacg
     1621 gcgagggccc tcgcccgggg ttcgtcgagc acctcgacga gatccgaccc gggcgcgacc
     1681 ttgtgcgcaa gcgccacaaa tatttcatcg gcgtgcttga tccctgcgcg tccatcgaat
     1741 tttcccgcgg ttgcccgtgg gactgctcgt tctgcagcgc ctggaccttc tacggccgca
     1801 gttaccggct gctcagcccg gaacgcgtga tcgacgacct cgcctccatc cgggagccgg
     1861 gccttttcat cgtcgacgac gtcgccttcg tgcaacaacg gcacggcttt gcaatcggcg
     1921 aagcgattgc tcgcaagggc atccgcaaga acttctacct tgagacgcgc ggcgacgtgc
     1981 tgctgcgtca caaggaagtg ttccagttct ggaagaagat cggcctcacc tacatctttc
     2041 tcggcctcga ggcgatcgac gaggatggtt tgcgaaagta tcgcaaacgc attccgctcg
     2101 ggcggaattt cgaggctctg gaattcgccc gctcgctggg cgtcgaggtg gccatcaata
     2161 tcatcgccga cccggactgg gatgaggagc gcttccgcgt gttgcgcgag tggtgcatga
     2221 acgtgccgga ggtggtgaac atcagcatca atacgcccta ccccggcacc gagacgtggc
     2281 tcaccgagca acgccgactg caaacgcggg actatcgctt gttcgacatc cagcatgcgg
     2341 tgctgccgac gaagctgccg cttgcggagt tctatcgcga gctcctgcac actcagcggg
     2401 tgctctaccg caagcatatg acgtggtgga cggcaccggt gttggccggc gtgctcgccc
     2461 gcaatctgct gcgtgggcaa accaacttca tgcgcggcat catgaattac aacaaggtct
     2521 acaacgccga gaagatgctg tcggatcatg cccggccggt ccactacgaa ttgccgttgc
     2581 cgccgcgcac gccggttgat agtcgggacg ccaaagcctc ccagctctat attcatgcac
     2641 cgcgcggccg cgccggccgc agcatcgacg attccaccga acgcttcgtc gaggcgacgc
     2701 gcatgggcac ttccacctaa gataaaatcg gctgcatcgt tgcgtgcgcc gcatgcgggg
     2761 atccgtttcc tgcggcgtgt accccgtcag gcctcgacgg caacgcgaac ggcgcttgtt
     2821 ccctgaccgc acaccaaata ccgtaaatat gctgcacgca tagtggatgt cggctttcca
     2881 ttaagcgcgc ctgcagcgct gcgtcccgga ggcgggaacg tgccccgatg gaaaccccta
     2941 tggccgtccc tgccggccgc cattccgcac tatggaattg cagtgctggc ggtcgccgca
     3001 gccgtcggcg ccgggctact taatcgaccg cttcctgcaa agcgcgccgt ttgtgtcgct
     3061 gtttctctgc gcggtccttc tcgcagcctg gcttggcggc ctcggcccgg gtctgtttgc
     3121 aaccggactc gccatcctgg ctttcgacta ctttttcatt cccccggtgc tttcggtcga
     3181 gttgggggtt cagggcgggc tgcggctcgc gctttttgcc gtcgctgcac tgatcgtggt
     3241 ttggatcagc gcggcgcaga gacgcacggc ggagtcgctg cgccgcgcac gcgacgatct
     3301 gcgggcgacg gtcgcggagt tgcggcggag cgagacctat ttggcggaag cgcagcggct
     3361 cagtaacacc ggaagcttcg gttggaagat cgggactgac aagatcatct ggtcgaaaga
     3421 gacctatcgg atcatgggat ttgatgaaac cgttcggccg acaattggtc tgctcctgca
     3481 acgcgtgcat cccgacgatc gcggatacgt acagcggcag cttgaccgcg cggtgcgagg
     3541 cgaggtgcac ttcgactatg aataccgttt gaagatgccc gatggagaga tcaaagacat
     3601 tcacgttcga gcgcgtcgtc aaggcgatga aacgggcgag gaggaactcg tcggtgcgct
     3661 gatggacgtg actgcggcca agcgagcgca agaggcgttg caagtcgccc aaaccgcgct
     3721 cgcccacgtc acgcgcgtga ccatgctcgg agagatgacc acgtcgatcg cgcatgaagt
     3781 gaaccaaccg ctcggcgcca tcgtaaccaa cgcgggagcc agcttgcggt ggctgggccg
     3841 ccagcctccc gagatcgaag aggtgcgcac cgcgatcggg caaattgtca acgacgccca
     3901 tcgcgccaac gaggtgattc gcaggatccg caagttctcg aagaacgtcg acccggagat
     3961 gatccgcctg gacatcaacg aggtcgtcga agaggcggtc acgctcctgc ggcacgacgc
     4021 gcttcggcat ggagttgcga ttcggctcga attcgcgccg gacctgctcc cggtgcgcgg
     4081 ggatcgcatc cagctgcaac aagtgatcgt caatctcctc atcaatggca tggaagcgat
     4141 ggcgaccctg cgcgagcggg agcgcgtgct cgtcgtccgc acgcaacgcc aagccgatgg
     4201 cgtgctggtg gctatcgaag atgccggcgt cggtatcaag cccgagaacg cagaccggct
     4261 gttcagcgct ttctacacga ccaaacctga tggcttgggc atgggcctct cgatcgtccg
     4321 ctcgatcatc gaagcgcacg gcgggcgggt gtgggcggcg cccaatgccg gtcccggcat
     4381 gacgtttcaa tttacgcttt cagcggacgc gcgacaccag cgagcgagcg cacatcagta
     4441 gaccgccgcc tcgtttcgcg gcaacgagag acgcctgcgc cctgctcttg cgtcctcgtc
     4501 agtgcgcggt tgccgcaatc tgagcgccct gcgctcgccg cttgcgctga ttgtgaaccc
     4561 acggcttgct ggatttgccg cgcacggatt cccttgccgc cttgagcacg accggaccta
     4621 cattcgcgag gaacaccttt tcgtgggtgc gcgagagcat ctcgatggct tgcttcaacg
     4681 agagccactt cacggccttg atgtcgtcca tcggctcgcg catgggtccg ccgatgacgc
     4741 gcatgtgcca aaactgcacg atcttcatcc ggccatccac ggaatagagc atggagccaa
     4801 ggaagccgtg caccgaaacc tgatgtccgg tttcctcaaa tacttctcgt ttggctccga
     4861 caagcgcggg ctcgcctgga tagagttttc ccttcggcag cacccatgac ttgtcccttc
     4921 gcaatcgcac gattgcgatg cgcggtctgg agccgtcgcg taagacaatt ccgcccgcgg
     4981 ccagaatcgg catggcaccc tcggttgaat aggccatgtc agtgccaaac cgatcgaacg
     5041 ccctggcggt aagtggccgc tcgcgctcgc tcgcccaaaa gggcgagcca cattgcacac
     5101 agcgccgccg taagaacccc aatggttacg gctccccagt ccatgacgta gcctccgaat
     5161 cacacggaaa gacgcttctc ccttgatggg agcgccgcgc atgctcgctc gactatactt
     5221 aacgcgaggt taacgtaccc aaccgacggc cgcactggcg agcgcgcgcg gcagtcgtgc
     5281 attttgcacg cgtacggctg cgcatcacgc aaatcacacc gtaatttgca gcacgcgatt
     5341 ttttatttcg agtggcgcag gaattgcgac gggtccgcag tttggatatg tgccaaggca
     5401 acgaacgggt gtcgaatgat caacgatgac gagctcaagt gttcgaagtg ccaagcgcca
     5461 taaagtggtg cgcatgaatt cggacgccaa gggcatccat caatcgctcc attgcaagat
     5521 ttgcgggcag cccctcaccc ccactcacga aggacacatc ctgaaatact ttcttgttcg
     5581 atggccgagc gccgcgcgcg gctcctgata tctcgcgaat gccgcagcag ctcatgttta
     5641 ccgaataatt aagatgctgc cggtaccagt tacggcatgg tccggctcag cagagaacca
     5701 ggcgccgagt gtccggcctg tcgccgccga atggtgccca tggaccgcaa acccattgtc
     5761 agcaccgatt gcctggtcga cgtgacctat atctgcgagt ggtgcggcat ggagacaaag
     5821 cgcgccgtca gagagcaggc aaaacgccct cacgcgctga ccggcagccg aaacgatctc
     5881 tcacgtaacg ttggccgcta gcaattttcc cgagagaagg cgcacgcggt ccaagccgct
     5941 tcgggctgac cgtgcaccgc cggccggcgc gttgcggtca agctcgggga tcatgcgccg
     6001 caggcgcgcg gatgcgaagc gagccgacca ttcgttttcg gtccggtttg cgtcattccc
     6061 gtcggaaagc aggagtgccc ttgggtcatg tccgcggtgc ctcagagcag cgttttcgcg
     6121 ggagcggtgt ggtaatgtgt gcggcctcgc cgtctgcccc tcccagtgga gaaccgcaat
     6181 gtctcgtatc aggatgcagt tgttcgcgtt cgcctgtgcc gtgctccttg tcacgccggc
     6241 ggcggtaacc cgcacgtacg cccagcaagc ggcgatgccg caagactctt tccttctgac
     6301 cgtgtttctc aagcatgatc aaagcaagac gctcgatcag atcaacgagc aactcaagca
     6361 ccaggattac tacaagaaat ttcccccgcc cggggtggag atcgtctcct ggtatgtgat
     6421 gatgggcatc ggccaggttg tcacgttgcg cgtgccagcc aaccgtttgc gcgacgtcaa
     6481 ccgcgcgatt gagcaaagcg cctggggtgc ttaccgcacc gagttttatc cgacctacga
     6541 cttcaagccg gtcgccgagg aacagcgcaa aacgcagtag gatcgcttgt gcgaccgccg
     6601 cgcggggtac gcgctcagta ccccagcgcg catccgtcct tgcgcgggtc ggagccgccg
     6661 atcagaacgc cgcgttccca gtcgatgcgg atcgcttgcg cgccgcccca tgggcgtggc
     6721 gcgagctcca cctcgtgccc gcgcgcgcca agcccctcga cgctcgttcg cggcagtcct
     6781 cgctcgacca cgctcgtttc ctccacgaag aatgcacgcg gcccgtcgat cgccgcctgc
     6841 acgtccatgc catagtcgat gacgttggtg acgatctgcg cgtgtcccat gggctggtaa
     6901 tgcgcgccca tcacgccgaa cgcgagctcg catcgcccgc cacggaagcc gagcgccggg
     6961 atgatggtat gcatcggccg tttgttcgga ccgaaggcat tgggatggcc aggatcgagc
     7021 acgaaacatg cgccgcggtc ggtcagcgtg atgccggtct cttgcgtgca gatgcctgcg
     7081 ccaaaattgg aaaagagcgt gttgatcagc gagaccgcca tgcggtcgcg atcgaccacc
     7141 gttacaaaga cggtgtcgct gtcgggctgc ggcggcgcgc tcggcatggg ctcgcgccgc
     7201 gccgggtcga tgccgcgggc g
//
